0s autopkgtest [08:57:55]: starting date and time: 2024-11-13 08:57:55+0000 1s autopkgtest [08:57:56]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 1s autopkgtest [08:57:56]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.hatb17fk/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade bottleneck --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-53.secgroup --name adt-plucky-arm64-bottleneck-20241113-085052-juju-7f2275-prod-proposed-migration-environment-20-16d80e32-6c92-42c9-8213-c27bbc32323f --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 99s autopkgtest [08:59:34]: testbed dpkg architecture: arm64 99s autopkgtest [08:59:34]: testbed apt version: 2.9.8 99s autopkgtest [08:59:34]: @@@@@@@@@@@@@@@@@@@@ test bed setup 100s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 101s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB] 101s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 101s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [849 kB] 101s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB] 101s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [104 kB] 101s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 101s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [601 kB] 101s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [17.1 kB] 101s Fetched 1793 kB in 1s (1866 kB/s) 101s Reading package lists... 104s Reading package lists... 104s Building dependency tree... 104s Reading state information... 105s Calculating upgrade... 106s The following NEW packages will be installed: 106s python3.13-gdbm 106s The following packages will be upgraded: 106s libpython3-stdlib python3 python3-gdbm python3-minimal 106s 4 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 106s Need to get 101 kB of archives. 106s After this operation, 141 kB of additional disk space will be used. 106s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-minimal arm64 3.12.7-1 [27.4 kB] 106s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3 arm64 3.12.7-1 [24.0 kB] 106s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpython3-stdlib arm64 3.12.7-1 [10.0 kB] 106s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-gdbm arm64 3.13.0-2 [30.7 kB] 107s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-gdbm arm64 3.12.7-1 [8642 B] 107s Fetched 101 kB in 0s (285 kB/s) 107s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 107s Preparing to unpack .../python3-minimal_3.12.7-1_arm64.deb ... 107s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 107s Setting up python3-minimal (3.12.7-1) ... 108s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 108s Preparing to unpack .../python3_3.12.7-1_arm64.deb ... 108s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 108s Preparing to unpack .../libpython3-stdlib_3.12.7-1_arm64.deb ... 108s Unpacking libpython3-stdlib:arm64 (3.12.7-1) over (3.12.6-0ubuntu1) ... 108s Selecting previously unselected package python3.13-gdbm. 108s Preparing to unpack .../python3.13-gdbm_3.13.0-2_arm64.deb ... 108s Unpacking python3.13-gdbm (3.13.0-2) ... 108s Preparing to unpack .../python3-gdbm_3.12.7-1_arm64.deb ... 108s Unpacking python3-gdbm:arm64 (3.12.7-1) over (3.12.6-1ubuntu1) ... 108s Setting up python3.13-gdbm (3.13.0-2) ... 108s Setting up libpython3-stdlib:arm64 (3.12.7-1) ... 108s Setting up python3 (3.12.7-1) ... 109s Setting up python3-gdbm:arm64 (3.12.7-1) ... 109s Processing triggers for man-db (2.12.1-3) ... 109s Reading package lists... 110s Building dependency tree... 110s Reading state information... 111s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 112s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 112s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 112s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 112s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 113s Reading package lists... 113s Reading package lists... 114s Building dependency tree... 114s Reading state information... 115s Calculating upgrade... 116s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 116s Reading package lists... 116s Building dependency tree... 116s Reading state information... 118s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 121s autopkgtest [08:59:56]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024 121s autopkgtest [08:59:56]: @@@@@@@@@@@@@@@@@@@@ apt-source bottleneck 123s Get:1 http://ftpmaster.internal/ubuntu plucky/universe bottleneck 1.3.8+ds1-1 (dsc) [2362 B] 123s Get:2 http://ftpmaster.internal/ubuntu plucky/universe bottleneck 1.3.8+ds1-1 (tar) [76.3 kB] 123s Get:3 http://ftpmaster.internal/ubuntu plucky/universe bottleneck 1.3.8+ds1-1 (diff) [6020 B] 123s gpgv: Signature made Wed May 29 09:30:28 2024 UTC 123s gpgv: using RSA key 8F6DE104377F3B11E741748731F3144544A1741A 123s gpgv: Can't check signature: No public key 123s dpkg-source: warning: cannot verify inline signature for ./bottleneck_1.3.8+ds1-1.dsc: no acceptable signature found 123s autopkgtest [08:59:58]: testing package bottleneck version 1.3.8+ds1-1 124s autopkgtest [08:59:59]: build not needed 124s autopkgtest [08:59:59]: test command1: preparing testbed 126s Reading package lists... 126s Building dependency tree... 126s Reading state information... 127s Starting pkgProblemResolver with broken count: 0 127s Starting 2 pkgProblemResolver with broken count: 0 127s Done 128s The following additional packages will be installed: 128s libblas3 libgfortran5 liblapack3 libpython3.13-minimal libpython3.13-stdlib 128s python3-all python3-bottleneck python3-iniconfig python3-numpy 128s python3-packaging python3-pluggy python3-pytest python3.13 128s python3.13-minimal 128s Suggested packages: 128s python-bottleneck-doc gcc gfortran python-numpy-doc python3-dev 128s python3.13-venv python3.13-doc binfmt-support 128s The following NEW packages will be installed: 128s autopkgtest-satdep libblas3 libgfortran5 liblapack3 libpython3.13-minimal 128s libpython3.13-stdlib python3-all python3-bottleneck python3-iniconfig 128s python3-numpy python3-packaging python3-pluggy python3-pytest python3.13 128s python3.13-minimal 128s 0 upgraded, 15 newly installed, 0 to remove and 0 not upgraded. 128s Need to get 12.7 MB/12.7 MB of archives. 128s After this operation, 53.8 MB of additional disk space will be used. 128s Get:1 /tmp/autopkgtest.9uJRgl/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [724 B] 128s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-minimal arm64 3.13.0-2 [877 kB] 129s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-minimal arm64 3.13.0-2 [2100 kB] 129s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-3build2 [152 kB] 129s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-8ubuntu1 [438 kB] 129s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-3build2 [2293 kB] 129s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-stdlib arm64 3.13.0-2 [2073 kB] 129s Get:8 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13 arm64 3.13.0-2 [719 kB] 129s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-all arm64 3.12.7-1 [890 B] 129s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy arm64 1:1.26.4+ds-11build1 [3654 kB] 129s Get:11 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-bottleneck arm64 1.3.8+ds1-1 [77.9 kB] 129s Get:12 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-iniconfig all 1.1.1-2 [6024 B] 129s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-packaging all 24.1-1 [41.4 kB] 129s Get:14 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pluggy all 1.5.0-1 [21.0 kB] 129s Get:15 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pytest all 8.3.3-1 [251 kB] 130s Fetched 12.7 MB in 1s (11.3 MB/s) 130s Selecting previously unselected package libpython3.13-minimal:arm64. 130s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79931 files and directories currently installed.) 130s Preparing to unpack .../00-libpython3.13-minimal_3.13.0-2_arm64.deb ... 130s Unpacking libpython3.13-minimal:arm64 (3.13.0-2) ... 130s Selecting previously unselected package python3.13-minimal. 130s Preparing to unpack .../01-python3.13-minimal_3.13.0-2_arm64.deb ... 130s Unpacking python3.13-minimal (3.13.0-2) ... 130s Selecting previously unselected package libblas3:arm64. 130s Preparing to unpack .../02-libblas3_3.12.0-3build2_arm64.deb ... 130s Unpacking libblas3:arm64 (3.12.0-3build2) ... 130s Selecting previously unselected package libgfortran5:arm64. 130s Preparing to unpack .../03-libgfortran5_14.2.0-8ubuntu1_arm64.deb ... 130s Unpacking libgfortran5:arm64 (14.2.0-8ubuntu1) ... 130s Selecting previously unselected package liblapack3:arm64. 130s Preparing to unpack .../04-liblapack3_3.12.0-3build2_arm64.deb ... 130s Unpacking liblapack3:arm64 (3.12.0-3build2) ... 130s Selecting previously unselected package libpython3.13-stdlib:arm64. 130s Preparing to unpack .../05-libpython3.13-stdlib_3.13.0-2_arm64.deb ... 130s Unpacking libpython3.13-stdlib:arm64 (3.13.0-2) ... 131s Selecting previously unselected package python3.13. 131s Preparing to unpack .../06-python3.13_3.13.0-2_arm64.deb ... 131s Unpacking python3.13 (3.13.0-2) ... 131s Selecting previously unselected package python3-all. 131s Preparing to unpack .../07-python3-all_3.12.7-1_arm64.deb ... 131s Unpacking python3-all (3.12.7-1) ... 131s Selecting previously unselected package python3-numpy. 131s Preparing to unpack .../08-python3-numpy_1%3a1.26.4+ds-11build1_arm64.deb ... 131s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 131s Selecting previously unselected package python3-bottleneck. 131s Preparing to unpack .../09-python3-bottleneck_1.3.8+ds1-1_arm64.deb ... 131s Unpacking python3-bottleneck (1.3.8+ds1-1) ... 131s Selecting previously unselected package python3-iniconfig. 131s Preparing to unpack .../10-python3-iniconfig_1.1.1-2_all.deb ... 131s Unpacking python3-iniconfig (1.1.1-2) ... 131s Selecting previously unselected package python3-packaging. 131s Preparing to unpack .../11-python3-packaging_24.1-1_all.deb ... 131s Unpacking python3-packaging (24.1-1) ... 131s Selecting previously unselected package python3-pluggy. 131s Preparing to unpack .../12-python3-pluggy_1.5.0-1_all.deb ... 131s Unpacking python3-pluggy (1.5.0-1) ... 131s Selecting previously unselected package python3-pytest. 131s Preparing to unpack .../13-python3-pytest_8.3.3-1_all.deb ... 131s Unpacking python3-pytest (8.3.3-1) ... 131s Selecting previously unselected package autopkgtest-satdep. 131s Preparing to unpack .../14-1-autopkgtest-satdep.deb ... 131s Unpacking autopkgtest-satdep (0) ... 131s Setting up python3-iniconfig (1.1.1-2) ... 132s Setting up libpython3.13-minimal:arm64 (3.13.0-2) ... 132s Setting up libblas3:arm64 (3.12.0-3build2) ... 132s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 132s Setting up python3-packaging (24.1-1) ... 132s Setting up libgfortran5:arm64 (14.2.0-8ubuntu1) ... 132s Setting up python3-pluggy (1.5.0-1) ... 133s Setting up python3.13-minimal (3.13.0-2) ... 134s Setting up libpython3.13-stdlib:arm64 (3.13.0-2) ... 134s Setting up liblapack3:arm64 (3.12.0-3build2) ... 134s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 134s Setting up python3.13 (3.13.0-2) ... 135s Setting up python3-pytest (8.3.3-1) ... 136s Setting up python3-all (3.12.7-1) ... 136s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 141s Setting up python3-bottleneck (1.3.8+ds1-1) ... 141s Setting up autopkgtest-satdep (0) ... 141s Processing triggers for systemd (256.5-2ubuntu4) ... 141s Processing triggers for man-db (2.12.1-3) ... 142s Processing triggers for libc-bin (2.40-1ubuntu3) ... 147s (Reading database ... 81780 files and directories currently installed.) 147s Removing autopkgtest-satdep (0) ... 148s autopkgtest [09:00:23]: test command1: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import bottleneck as bn; bn.test()" ; done 148s autopkgtest [09:00:23]: test command1: [----------------------- 148s Testing with python3.13: 148s Traceback (most recent call last): 148s File "/usr/lib/python3/dist-packages/numpy/core/__init__.py", line 24, in 148s from . import multiarray 148s File "/usr/lib/python3/dist-packages/numpy/core/multiarray.py", line 10, in 148s from . import overrides 148s File "/usr/lib/python3/dist-packages/numpy/core/overrides.py", line 8, in 148s from numpy.core._multiarray_umath import ( 148s add_docstring, _get_implementing_args, _ArrayFunctionDispatcher) 148s ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 148s 148s During handling of the above exception, another exception occurred: 148s 148s Traceback (most recent call last): 148s File "/usr/lib/python3/dist-packages/numpy/__init__.py", line 130, in 148s from numpy.__config__ import show as show_config 148s File "/usr/lib/python3/dist-packages/numpy/__config__.py", line 4, in 148s from numpy.core._multiarray_umath import ( 148s ...<3 lines>... 148s ) 148s File "/usr/lib/python3/dist-packages/numpy/core/__init__.py", line 50, in 148s raise ImportError(msg) 148s ImportError: 148s 148s IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 148s 148s Importing the numpy C-extensions failed. This error can happen for 148s many reasons, often due to issues with your setup or how NumPy was 148s installed. 148s 148s We have compiled some common reasons and troubleshooting tips at: 148s 148s https://numpy.org/devdocs/user/troubleshooting-importerror.html 148s 148s Please note and check the following: 148s 148s * The Python version is: Python3.13 from "/usr/bin/python3.13" 148s * The NumPy version is: "1.26.4" 148s 148s and make sure that they are the versions you expect. 148s Please carefully study the documentation linked above for further help. 148s 148s Original error was: No module named 'numpy.core._multiarray_umath' 148s 148s 148s The above exception was the direct cause of the following exception: 148s 148s Traceback (most recent call last): 148s File "", line 1, in 148s import bottleneck as bn; bn.test() 148s ^^^^^^^^^^^^^^^^^^^^^^^ 148s File "/usr/lib/python3/dist-packages/bottleneck/__init__.py", line 1, in 148s from bottleneck.benchmark.bench import bench 148s File "/usr/lib/python3/dist-packages/bottleneck/benchmark/bench.py", line 1, in 148s import numpy as np 148s File "/usr/lib/python3/dist-packages/numpy/__init__.py", line 135, in 148s raise ImportError(msg) from e 148s ImportError: Error importing numpy: you should not try to import numpy from 148s its source directory; please exit the numpy source tree, and relaunch 148s your python interpreter from there. 148s autopkgtest [09:00:23]: test command1: -----------------------] 150s autopkgtest [09:00:24]: test command1: - - - - - - - - - - results - - - - - - - - - - 150s command1 FAIL non-zero exit status 1 150s autopkgtest [09:00:25]: @@@@@@@@@@@@@@@@@@@@ summary 150s command1 FAIL non-zero exit status 1 170s nova [W] Skipping flock in bos03-arm64 170s Creating nova instance adt-plucky-arm64-bottleneck-20241113-085052-juju-7f2275-prod-proposed-migration-environment-20-16d80e32-6c92-42c9-8213-c27bbc32323f from image adt/ubuntu-plucky-arm64-server-20241113.img (UUID 2d7760e6-2439-4200-89d6-5ed33e5c6330)...