0s autopkgtest [14:37:03]: starting date and time: 2024-12-04 14:37:03+0000 0s autopkgtest [14:37:03]: git checkout: 48af33f0 Fix --add-apt-source=ppa for focal 0s autopkgtest [14:37:03]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.dew2zab8/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:h5py,src:openmpi --apt-upgrade bitshuffle --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=h5py/3.11.0-8ubuntu3 openmpi/5.0.6-3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-24.secgroup --name adt-plucky-arm64-bitshuffle-20241204-143703-juju-7f2275-prod-proposed-migration-environment-20-be74a9b1-0bc7-4f02-9c86-cf710d0e6584 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 148s autopkgtest [14:39:31]: testbed dpkg architecture: arm64 149s autopkgtest [14:39:32]: testbed apt version: 2.9.16 149s autopkgtest [14:39:32]: @@@@@@@@@@@@@@@@@@@@ test bed setup 149s autopkgtest [14:39:32]: testbed release detected to be: None 150s autopkgtest [14:39:33]: updating testbed package index (apt update) 150s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 151s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 151s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 151s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 151s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [14.2 kB] 151s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [745 kB] 151s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [58.3 kB] 151s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 151s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [125 kB] 151s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [58.2 kB] 151s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [617 kB] 151s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [20.8 kB] 151s Fetched 1721 kB in 1s (1461 kB/s) 152s Reading package lists... 153s Reading package lists... 153s Building dependency tree... 153s Reading state information... 154s Calculating upgrade... 155s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 155s Reading package lists... 155s Building dependency tree... 155s Reading state information... 156s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 156s autopkgtest [14:39:39]: upgrading testbed (apt dist-upgrade and autopurge) 156s Reading package lists... 156s Building dependency tree... 156s Reading state information... 157s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 157s Starting 2 pkgProblemResolver with broken count: 0 157s Done 158s Entering ResolveByKeep 158s 158s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 159s Reading package lists... 159s Building dependency tree... 159s Reading state information... 159s Starting pkgProblemResolver with broken count: 0 159s Starting 2 pkgProblemResolver with broken count: 0 159s Done 160s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 163s autopkgtest [14:39:46]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024 163s autopkgtest [14:39:46]: @@@@@@@@@@@@@@@@@@@@ apt-source bitshuffle 165s Get:1 http://ftpmaster.internal/ubuntu plucky/universe bitshuffle 0.5.2-1 (dsc) [2640 B] 165s Get:2 http://ftpmaster.internal/ubuntu plucky/universe bitshuffle 0.5.2-1 (tar) [197 kB] 165s Get:3 http://ftpmaster.internal/ubuntu plucky/universe bitshuffle 0.5.2-1 (diff) [7612 B] 165s gpgv: Signature made Tue Nov 19 11:16:33 2024 UTC 165s gpgv: using RSA key D9B453B799B8830D945E6A0A5BF54E5E12B900BB 165s gpgv: issuer "picca@debian.org" 165s gpgv: Can't check signature: No public key 165s dpkg-source: warning: cannot verify inline signature for ./bitshuffle_0.5.2-1.dsc: no acceptable signature found 165s autopkgtest [14:39:48]: testing package bitshuffle version 0.5.2-1 166s autopkgtest [14:39:49]: build not needed 166s autopkgtest [14:39:49]: test command1: preparing testbed 167s Reading package lists... 167s Building dependency tree... 167s Reading state information... 168s Starting pkgProblemResolver with broken count: 0 168s Starting 2 pkgProblemResolver with broken count: 0 168s Done 169s The following NEW packages will be installed: 169s bitshuffle libaec0 libamd-comgr2 libamdhip64-5 libblas3 169s libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 libgomp1 libhdf5-103-1t64 169s libhdf5-hl-100t64 libhdf5-openmpi-103-1t64 libhsa-runtime64-1 libhsakmt1 169s libhwloc-plugins libhwloc15 libibmad5 libibumad3 liblapack3 libllvm17t64 169s liblzf1 libmunge2 libopenmpi3t64 libpciaccess0 libpmix2t64 librdmacm1t64 169s libsz2 libucx0 libxnvctrl0 ocl-icd-libopencl1 python3-h5py 169s python3-h5py-serial python3-numpy 169s 0 upgraded, 33 newly installed, 0 to remove and 0 not upgraded. 169s Need to get 65.2 MB of archives. 169s After this operation, 283 MB of additional disk space will be used. 169s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-4 [152 kB] 169s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-9ubuntu1 [437 kB] 170s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-4 [2305 kB] 171s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy arm64 1:1.26.4+ds-11ubuntu1 [4149 kB] 172s Get:5 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB] 172s Get:6 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsz2 arm64 1.1.3-1 [5254 B] 172s Get:7 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-103-1t64 arm64 1.10.10+repack-4ubuntu3 [1207 kB] 172s Get:8 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-4ubuntu3 [56.9 kB] 172s Get:9 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblzf1 arm64 3.6-4 [7426 B] 172s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 python3-h5py-serial arm64 3.11.0-8ubuntu3 [1452 kB] 172s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 python3-h5py all 3.11.0-8ubuntu3 [7982 B] 172s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-9ubuntu1 [145 kB] 172s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libevent-pthreads-2.1-7t64 arm64 2.1.12-stable-10 [7922 B] 172s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 librdmacm1t64 arm64 52.0-2ubuntu1 [71.5 kB] 172s Get:15 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfabric1 arm64 1.17.0-3ubuntu1 [542 kB] 172s Get:16 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhwloc15 arm64 2.11.2-1 [162 kB] 172s Get:17 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmunge2 arm64 0.5.15-4build1 [14.9 kB] 172s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 libpciaccess0 arm64 0.17-3build1 [18.9 kB] 172s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libxnvctrl0 arm64 510.47.03-0ubuntu4 [12.4 kB] 172s Get:20 http://ftpmaster.internal/ubuntu plucky/universe arm64 ocl-icd-libopencl1 arm64 2.3.2-1build1 [37.6 kB] 172s Get:21 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhwloc-plugins arm64 2.11.2-1 [15.8 kB] 172s Get:22 http://ftpmaster.internal/ubuntu plucky/universe arm64 libpmix2t64 arm64 5.0.4-1 [676 kB] 173s Get:23 http://ftpmaster.internal/ubuntu plucky/universe arm64 libllvm17t64 arm64 1:17.0.6-18 [24.9 MB] 174s Get:24 http://ftpmaster.internal/ubuntu plucky/universe arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3build2 [14.1 MB] 175s Get:25 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhsakmt1 arm64 5.7.0-1build1 [63.6 kB] 175s Get:26 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhsa-runtime64-1 arm64 5.7.1-2build1 [286 kB] 175s Get:27 http://ftpmaster.internal/ubuntu plucky/universe arm64 libamdhip64-5 arm64 5.7.1-5 [9704 kB] 175s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libibumad3 arm64 52.0-2ubuntu1 [29.3 kB] 175s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libibmad5 arm64 52.0-2ubuntu1 [43.1 kB] 175s Get:30 http://ftpmaster.internal/ubuntu plucky/universe arm64 libucx0 arm64 1.17.0+ds-3build1 [1093 kB] 175s Get:31 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 libopenmpi3t64 arm64 5.0.5-6 [2041 kB] 175s Get:32 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-openmpi-103-1t64 arm64 1.10.10+repack-4ubuntu3 [1258 kB] 175s Get:33 http://ftpmaster.internal/ubuntu plucky/universe arm64 bitshuffle arm64 0.5.2-1 [205 kB] 176s Fetched 65.2 MB in 6s (10.3 MB/s) 176s Selecting previously unselected package libblas3:arm64. 176s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80338 files and directories currently installed.) 176s Preparing to unpack .../00-libblas3_3.12.0-4_arm64.deb ... 176s Unpacking libblas3:arm64 (3.12.0-4) ... 176s Selecting previously unselected package libgfortran5:arm64. 176s Preparing to unpack .../01-libgfortran5_14.2.0-9ubuntu1_arm64.deb ... 176s Unpacking libgfortran5:arm64 (14.2.0-9ubuntu1) ... 176s Selecting previously unselected package liblapack3:arm64. 176s Preparing to unpack .../02-liblapack3_3.12.0-4_arm64.deb ... 176s Unpacking liblapack3:arm64 (3.12.0-4) ... 176s Selecting previously unselected package python3-numpy. 176s Preparing to unpack .../03-python3-numpy_1%3a1.26.4+ds-11ubuntu1_arm64.deb ... 176s Unpacking python3-numpy (1:1.26.4+ds-11ubuntu1) ... 176s Selecting previously unselected package libaec0:arm64. 177s Preparing to unpack .../04-libaec0_1.1.3-1_arm64.deb ... 177s Unpacking libaec0:arm64 (1.1.3-1) ... 177s Selecting previously unselected package libsz2:arm64. 177s Preparing to unpack .../05-libsz2_1.1.3-1_arm64.deb ... 177s Unpacking libsz2:arm64 (1.1.3-1) ... 177s Selecting previously unselected package libhdf5-103-1t64:arm64. 177s Preparing to unpack .../06-libhdf5-103-1t64_1.10.10+repack-4ubuntu3_arm64.deb ... 177s Unpacking libhdf5-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 177s Selecting previously unselected package libhdf5-hl-100t64:arm64. 177s Preparing to unpack .../07-libhdf5-hl-100t64_1.10.10+repack-4ubuntu3_arm64.deb ... 177s Unpacking libhdf5-hl-100t64:arm64 (1.10.10+repack-4ubuntu3) ... 177s Selecting previously unselected package liblzf1:arm64. 177s Preparing to unpack .../08-liblzf1_3.6-4_arm64.deb ... 177s Unpacking liblzf1:arm64 (3.6-4) ... 177s Selecting previously unselected package python3-h5py-serial. 177s Preparing to unpack .../09-python3-h5py-serial_3.11.0-8ubuntu3_arm64.deb ... 177s Unpacking python3-h5py-serial (3.11.0-8ubuntu3) ... 177s Selecting previously unselected package python3-h5py. 177s Preparing to unpack .../10-python3-h5py_3.11.0-8ubuntu3_all.deb ... 177s Unpacking python3-h5py (3.11.0-8ubuntu3) ... 177s Selecting previously unselected package libgomp1:arm64. 177s Preparing to unpack .../11-libgomp1_14.2.0-9ubuntu1_arm64.deb ... 177s Unpacking libgomp1:arm64 (14.2.0-9ubuntu1) ... 177s Selecting previously unselected package libevent-pthreads-2.1-7t64:arm64. 177s Preparing to unpack .../12-libevent-pthreads-2.1-7t64_2.1.12-stable-10_arm64.deb ... 177s Unpacking libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10) ... 177s Selecting previously unselected package librdmacm1t64:arm64. 177s Preparing to unpack .../13-librdmacm1t64_52.0-2ubuntu1_arm64.deb ... 177s Unpacking librdmacm1t64:arm64 (52.0-2ubuntu1) ... 177s Selecting previously unselected package libfabric1:arm64. 177s Preparing to unpack .../14-libfabric1_1.17.0-3ubuntu1_arm64.deb ... 177s Unpacking libfabric1:arm64 (1.17.0-3ubuntu1) ... 177s Selecting previously unselected package libhwloc15:arm64. 177s Preparing to unpack .../15-libhwloc15_2.11.2-1_arm64.deb ... 177s Unpacking libhwloc15:arm64 (2.11.2-1) ... 177s Selecting previously unselected package libmunge2:arm64. 177s Preparing to unpack .../16-libmunge2_0.5.15-4build1_arm64.deb ... 177s Unpacking libmunge2:arm64 (0.5.15-4build1) ... 177s Selecting previously unselected package libpciaccess0:arm64. 177s Preparing to unpack .../17-libpciaccess0_0.17-3build1_arm64.deb ... 177s Unpacking libpciaccess0:arm64 (0.17-3build1) ... 177s Selecting previously unselected package libxnvctrl0:arm64. 177s Preparing to unpack .../18-libxnvctrl0_510.47.03-0ubuntu4_arm64.deb ... 177s Unpacking libxnvctrl0:arm64 (510.47.03-0ubuntu4) ... 177s Selecting previously unselected package ocl-icd-libopencl1:arm64. 177s Preparing to unpack .../19-ocl-icd-libopencl1_2.3.2-1build1_arm64.deb ... 177s Unpacking ocl-icd-libopencl1:arm64 (2.3.2-1build1) ... 177s Selecting previously unselected package libhwloc-plugins:arm64. 177s Preparing to unpack .../20-libhwloc-plugins_2.11.2-1_arm64.deb ... 177s Unpacking libhwloc-plugins:arm64 (2.11.2-1) ... 177s Selecting previously unselected package libpmix2t64:arm64. 177s Preparing to unpack .../21-libpmix2t64_5.0.4-1_arm64.deb ... 177s Unpacking libpmix2t64:arm64 (5.0.4-1) ... 177s Selecting previously unselected package libllvm17t64:arm64. 177s Preparing to unpack .../22-libllvm17t64_1%3a17.0.6-18_arm64.deb ... 177s Unpacking libllvm17t64:arm64 (1:17.0.6-18) ... 178s Selecting previously unselected package libamd-comgr2:arm64. 178s Preparing to unpack .../23-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3build2_arm64.deb ... 178s Unpacking libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3build2) ... 178s Selecting previously unselected package libhsakmt1:arm64. 178s Preparing to unpack .../24-libhsakmt1_5.7.0-1build1_arm64.deb ... 178s Unpacking libhsakmt1:arm64 (5.7.0-1build1) ... 179s Selecting previously unselected package libhsa-runtime64-1. 179s Preparing to unpack .../25-libhsa-runtime64-1_5.7.1-2build1_arm64.deb ... 179s Unpacking libhsa-runtime64-1 (5.7.1-2build1) ... 179s Selecting previously unselected package libamdhip64-5. 179s Preparing to unpack .../26-libamdhip64-5_5.7.1-5_arm64.deb ... 179s Unpacking libamdhip64-5 (5.7.1-5) ... 179s Selecting previously unselected package libibumad3:arm64. 179s Preparing to unpack .../27-libibumad3_52.0-2ubuntu1_arm64.deb ... 179s Unpacking libibumad3:arm64 (52.0-2ubuntu1) ... 179s Selecting previously unselected package libibmad5:arm64. 179s Preparing to unpack .../28-libibmad5_52.0-2ubuntu1_arm64.deb ... 179s Unpacking libibmad5:arm64 (52.0-2ubuntu1) ... 179s Selecting previously unselected package libucx0:arm64. 179s Preparing to unpack .../29-libucx0_1.17.0+ds-3build1_arm64.deb ... 179s Unpacking libucx0:arm64 (1.17.0+ds-3build1) ... 179s Selecting previously unselected package libopenmpi3t64:arm64. 179s Preparing to unpack .../30-libopenmpi3t64_5.0.5-6_arm64.deb ... 179s Unpacking libopenmpi3t64:arm64 (5.0.5-6) ... 179s Selecting previously unselected package libhdf5-openmpi-103-1t64:arm64. 179s Preparing to unpack .../31-libhdf5-openmpi-103-1t64_1.10.10+repack-4ubuntu3_arm64.deb ... 179s Unpacking libhdf5-openmpi-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 179s Selecting previously unselected package bitshuffle. 179s Preparing to unpack .../32-bitshuffle_0.5.2-1_arm64.deb ... 179s Unpacking bitshuffle (0.5.2-1) ... 179s Setting up libpciaccess0:arm64 (0.17-3build1) ... 179s Setting up libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10) ... 179s Setting up libibumad3:arm64 (52.0-2ubuntu1) ... 179s Setting up libibmad5:arm64 (52.0-2ubuntu1) ... 179s Setting up libgomp1:arm64 (14.2.0-9ubuntu1) ... 179s Setting up libaec0:arm64 (1.1.3-1) ... 179s Setting up libxnvctrl0:arm64 (510.47.03-0ubuntu4) ... 179s Setting up libblas3:arm64 (3.12.0-4) ... 179s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 179s Setting up libmunge2:arm64 (0.5.15-4build1) ... 179s Setting up libllvm17t64:arm64 (1:17.0.6-18) ... 179s Setting up liblzf1:arm64 (3.6-4) ... 179s Setting up libhwloc15:arm64 (2.11.2-1) ... 179s Setting up libgfortran5:arm64 (14.2.0-9ubuntu1) ... 179s Setting up ocl-icd-libopencl1:arm64 (2.3.2-1build1) ... 179s Setting up librdmacm1t64:arm64 (52.0-2ubuntu1) ... 179s Setting up libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3build2) ... 179s Setting up libhsakmt1:arm64 (5.7.0-1build1) ... 179s Setting up libsz2:arm64 (1.1.3-1) ... 179s Setting up libfabric1:arm64 (1.17.0-3ubuntu1) ... 179s Setting up liblapack3:arm64 (3.12.0-4) ... 179s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 179s Setting up libhwloc-plugins:arm64 (2.11.2-1) ... 179s Setting up libpmix2t64:arm64 (5.0.4-1) ... 179s Setting up python3-numpy (1:1.26.4+ds-11ubuntu1) ... 181s Setting up libhsa-runtime64-1 (5.7.1-2build1) ... 181s Setting up libhdf5-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 181s Setting up libhdf5-hl-100t64:arm64 (1.10.10+repack-4ubuntu3) ... 181s Setting up python3-h5py-serial (3.11.0-8ubuntu3) ... 182s Setting up libamdhip64-5 (5.7.1-5) ... 182s Setting up python3-h5py (3.11.0-8ubuntu3) ... 182s Setting up libucx0:arm64 (1.17.0+ds-3build1) ... 182s Setting up libopenmpi3t64:arm64 (5.0.5-6) ... 182s Setting up libhdf5-openmpi-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 182s Setting up bitshuffle (0.5.2-1) ... 182s Processing triggers for man-db (2.13.0-1) ... 183s Processing triggers for libc-bin (2.40-1ubuntu3) ... 184s autopkgtest [14:40:07]: test command1: python3 -c 'import sys, h5py; sys.exit(not h5py.h5z.filter_avail(32008))' 184s autopkgtest [14:40:07]: test command1: [----------------------- 185s autopkgtest [14:40:08]: test command1: -----------------------] 185s autopkgtest [14:40:08]: test command1: - - - - - - - - - - results - - - - - - - - - - 185s command1 PASS 186s autopkgtest [14:40:09]: test command2: preparing testbed 186s Reading package lists... 186s Building dependency tree... 186s Reading state information... 187s Starting pkgProblemResolver with broken count: 0 187s Starting 2 pkgProblemResolver with broken count: 0 187s Done 187s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 188s autopkgtest [14:40:11]: test command2: H5PY_ALWAYS_USE_MPI=1 python3 -c 'import sys, h5py; sys.exit(not h5py.h5z.filter_avail(32008))' 188s autopkgtest [14:40:11]: test command2: [----------------------- 189s autopkgtest [14:40:12]: test command2: -----------------------] 189s command2 PASS 189s autopkgtest [14:40:12]: test command2: - - - - - - - - - - results - - - - - - - - - - 190s autopkgtest [14:40:13]: test testsuite: preparing testbed 278s autopkgtest [14:41:41]: testbed dpkg architecture: arm64 278s autopkgtest [14:41:41]: testbed apt version: 2.9.16 278s autopkgtest [14:41:41]: @@@@@@@@@@@@@@@@@@@@ test bed setup 279s autopkgtest [14:41:42]: testbed release detected to be: plucky 279s autopkgtest [14:41:42]: updating testbed package index (apt update) 280s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 280s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 280s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 280s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 280s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [14.2 kB] 280s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 280s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [745 kB] 280s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [58.3 kB] 280s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [125 kB] 280s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [58.2 kB] 280s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [617 kB] 280s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [20.8 kB] 280s Fetched 1721 kB in 1s (1905 kB/s) 281s Reading package lists... 282s Reading package lists... 282s Building dependency tree... 282s Reading state information... 283s Calculating upgrade... 283s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 283s Reading package lists... 283s Building dependency tree... 283s Reading state information... 284s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 284s autopkgtest [14:41:47]: upgrading testbed (apt dist-upgrade and autopurge) 284s Reading package lists... 285s Building dependency tree... 285s Reading state information... 285s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 285s Starting 2 pkgProblemResolver with broken count: 0 285s Done 286s Entering ResolveByKeep 286s 287s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 287s Reading package lists... 287s Building dependency tree... 287s Reading state information... 287s Starting pkgProblemResolver with broken count: 0 288s Starting 2 pkgProblemResolver with broken count: 0 288s Done 288s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 291s Reading package lists... 291s Building dependency tree... 291s Reading state information... 292s Starting pkgProblemResolver with broken count: 0 292s Starting 2 pkgProblemResolver with broken count: 0 292s Done 292s The following NEW packages will be installed: 292s bitshuffle hdf5-tools libaec0 libamd-comgr2 libamdhip64-5 libblas3 292s libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 libgomp1 libhdf5-103-1t64 292s libhdf5-hl-100t64 libhdf5-openmpi-103-1t64 libhsa-runtime64-1 libhsakmt1 292s libhwloc-plugins libhwloc15 libibmad5 libibumad3 liblapack3 libllvm17t64 292s liblzf1 libmunge2 libopenmpi3t64 libpciaccess0 libpmix2t64 librdmacm1t64 292s libsz2 libucx0 libxnvctrl0 ocl-icd-libopencl1 python3-all python3-h5py 292s python3-h5py-serial python3-iniconfig python3-numpy python3-packaging 292s python3-pluggy python3-pytest 293s 0 upgraded, 39 newly installed, 0 to remove and 0 not upgraded. 293s Need to get 65.8 MB of archives. 293s After this operation, 286 MB of additional disk space will be used. 293s Get:1 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-4 [152 kB] 293s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-9ubuntu1 [437 kB] 293s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-4 [2305 kB] 293s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy arm64 1:1.26.4+ds-11ubuntu1 [4149 kB] 293s Get:5 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB] 293s Get:6 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsz2 arm64 1.1.3-1 [5254 B] 293s Get:7 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-103-1t64 arm64 1.10.10+repack-4ubuntu3 [1207 kB] 293s Get:8 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-4ubuntu3 [56.9 kB] 293s Get:9 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblzf1 arm64 3.6-4 [7426 B] 293s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 python3-h5py-serial arm64 3.11.0-8ubuntu3 [1452 kB] 293s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 python3-h5py all 3.11.0-8ubuntu3 [7982 B] 293s Get:12 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-9ubuntu1 [145 kB] 293s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libevent-pthreads-2.1-7t64 arm64 2.1.12-stable-10 [7922 B] 293s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 librdmacm1t64 arm64 52.0-2ubuntu1 [71.5 kB] 293s Get:15 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfabric1 arm64 1.17.0-3ubuntu1 [542 kB] 293s Get:16 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhwloc15 arm64 2.11.2-1 [162 kB] 293s Get:17 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmunge2 arm64 0.5.15-4build1 [14.9 kB] 293s Get:18 http://ftpmaster.internal/ubuntu plucky/main arm64 libpciaccess0 arm64 0.17-3build1 [18.9 kB] 293s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libxnvctrl0 arm64 510.47.03-0ubuntu4 [12.4 kB] 293s Get:20 http://ftpmaster.internal/ubuntu plucky/universe arm64 ocl-icd-libopencl1 arm64 2.3.2-1build1 [37.6 kB] 293s Get:21 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhwloc-plugins arm64 2.11.2-1 [15.8 kB] 294s Get:22 http://ftpmaster.internal/ubuntu plucky/universe arm64 libpmix2t64 arm64 5.0.4-1 [676 kB] 294s Get:23 http://ftpmaster.internal/ubuntu plucky/universe arm64 libllvm17t64 arm64 1:17.0.6-18 [24.9 MB] 294s Get:24 http://ftpmaster.internal/ubuntu plucky/universe arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3build2 [14.1 MB] 295s Get:25 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhsakmt1 arm64 5.7.0-1build1 [63.6 kB] 295s Get:26 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhsa-runtime64-1 arm64 5.7.1-2build1 [286 kB] 295s Get:27 http://ftpmaster.internal/ubuntu plucky/universe arm64 libamdhip64-5 arm64 5.7.1-5 [9704 kB] 295s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libibumad3 arm64 52.0-2ubuntu1 [29.3 kB] 295s Get:29 http://ftpmaster.internal/ubuntu plucky/main arm64 libibmad5 arm64 52.0-2ubuntu1 [43.1 kB] 295s Get:30 http://ftpmaster.internal/ubuntu plucky/universe arm64 libucx0 arm64 1.17.0+ds-3build1 [1093 kB] 295s Get:31 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 libopenmpi3t64 arm64 5.0.5-6 [2041 kB] 295s Get:32 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-openmpi-103-1t64 arm64 1.10.10+repack-4ubuntu3 [1258 kB] 295s Get:33 http://ftpmaster.internal/ubuntu plucky/universe arm64 bitshuffle arm64 0.5.2-1 [205 kB] 295s Get:34 http://ftpmaster.internal/ubuntu plucky/universe arm64 hdf5-tools arm64 1.10.10+repack-4ubuntu3 [319 kB] 295s Get:35 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-all arm64 3.12.6-0ubuntu1 [886 B] 295s Get:36 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-iniconfig all 1.1.1-2 [6024 B] 295s Get:37 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-packaging all 24.2-1 [51.5 kB] 295s Get:38 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pluggy all 1.5.0-1 [21.0 kB] 295s Get:39 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pytest all 8.3.3-1 [251 kB] 295s Fetched 65.8 MB in 2s (26.7 MB/s) 295s Selecting previously unselected package libblas3:arm64. 296s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80338 files and directories currently installed.) 296s Preparing to unpack .../00-libblas3_3.12.0-4_arm64.deb ... 296s Unpacking libblas3:arm64 (3.12.0-4) ... 296s Selecting previously unselected package libgfortran5:arm64. 296s Preparing to unpack .../01-libgfortran5_14.2.0-9ubuntu1_arm64.deb ... 296s Unpacking libgfortran5:arm64 (14.2.0-9ubuntu1) ... 296s Selecting previously unselected package liblapack3:arm64. 296s Preparing to unpack .../02-liblapack3_3.12.0-4_arm64.deb ... 296s Unpacking liblapack3:arm64 (3.12.0-4) ... 296s Selecting previously unselected package python3-numpy. 296s Preparing to unpack .../03-python3-numpy_1%3a1.26.4+ds-11ubuntu1_arm64.deb ... 296s Unpacking python3-numpy (1:1.26.4+ds-11ubuntu1) ... 296s Selecting previously unselected package libaec0:arm64. 296s Preparing to unpack .../04-libaec0_1.1.3-1_arm64.deb ... 296s Unpacking libaec0:arm64 (1.1.3-1) ... 296s Selecting previously unselected package libsz2:arm64. 296s Preparing to unpack .../05-libsz2_1.1.3-1_arm64.deb ... 296s Unpacking libsz2:arm64 (1.1.3-1) ... 296s Selecting previously unselected package libhdf5-103-1t64:arm64. 296s Preparing to unpack .../06-libhdf5-103-1t64_1.10.10+repack-4ubuntu3_arm64.deb ... 296s Unpacking libhdf5-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 296s Selecting previously unselected package libhdf5-hl-100t64:arm64. 296s Preparing to unpack .../07-libhdf5-hl-100t64_1.10.10+repack-4ubuntu3_arm64.deb ... 296s Unpacking libhdf5-hl-100t64:arm64 (1.10.10+repack-4ubuntu3) ... 296s Selecting previously unselected package liblzf1:arm64. 296s Preparing to unpack .../08-liblzf1_3.6-4_arm64.deb ... 296s Unpacking liblzf1:arm64 (3.6-4) ... 296s Selecting previously unselected package python3-h5py-serial. 296s Preparing to unpack .../09-python3-h5py-serial_3.11.0-8ubuntu3_arm64.deb ... 296s Unpacking python3-h5py-serial (3.11.0-8ubuntu3) ... 296s Selecting previously unselected package python3-h5py. 296s Preparing to unpack .../10-python3-h5py_3.11.0-8ubuntu3_all.deb ... 296s Unpacking python3-h5py (3.11.0-8ubuntu3) ... 296s Selecting previously unselected package libgomp1:arm64. 296s Preparing to unpack .../11-libgomp1_14.2.0-9ubuntu1_arm64.deb ... 296s Unpacking libgomp1:arm64 (14.2.0-9ubuntu1) ... 296s Selecting previously unselected package libevent-pthreads-2.1-7t64:arm64. 296s Preparing to unpack .../12-libevent-pthreads-2.1-7t64_2.1.12-stable-10_arm64.deb ... 296s Unpacking libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10) ... 296s Selecting previously unselected package librdmacm1t64:arm64. 296s Preparing to unpack .../13-librdmacm1t64_52.0-2ubuntu1_arm64.deb ... 296s Unpacking librdmacm1t64:arm64 (52.0-2ubuntu1) ... 296s Selecting previously unselected package libfabric1:arm64. 297s Preparing to unpack .../14-libfabric1_1.17.0-3ubuntu1_arm64.deb ... 297s Unpacking libfabric1:arm64 (1.17.0-3ubuntu1) ... 297s Selecting previously unselected package libhwloc15:arm64. 297s Preparing to unpack .../15-libhwloc15_2.11.2-1_arm64.deb ... 297s Unpacking libhwloc15:arm64 (2.11.2-1) ... 297s Selecting previously unselected package libmunge2:arm64. 297s Preparing to unpack .../16-libmunge2_0.5.15-4build1_arm64.deb ... 297s Unpacking libmunge2:arm64 (0.5.15-4build1) ... 297s Selecting previously unselected package libpciaccess0:arm64. 297s Preparing to unpack .../17-libpciaccess0_0.17-3build1_arm64.deb ... 297s Unpacking libpciaccess0:arm64 (0.17-3build1) ... 297s Selecting previously unselected package libxnvctrl0:arm64. 297s Preparing to unpack .../18-libxnvctrl0_510.47.03-0ubuntu4_arm64.deb ... 297s Unpacking libxnvctrl0:arm64 (510.47.03-0ubuntu4) ... 297s Selecting previously unselected package ocl-icd-libopencl1:arm64. 297s Preparing to unpack .../19-ocl-icd-libopencl1_2.3.2-1build1_arm64.deb ... 297s Unpacking ocl-icd-libopencl1:arm64 (2.3.2-1build1) ... 297s Selecting previously unselected package libhwloc-plugins:arm64. 297s Preparing to unpack .../20-libhwloc-plugins_2.11.2-1_arm64.deb ... 297s Unpacking libhwloc-plugins:arm64 (2.11.2-1) ... 297s Selecting previously unselected package libpmix2t64:arm64. 297s Preparing to unpack .../21-libpmix2t64_5.0.4-1_arm64.deb ... 297s Unpacking libpmix2t64:arm64 (5.0.4-1) ... 297s Selecting previously unselected package libllvm17t64:arm64. 297s Preparing to unpack .../22-libllvm17t64_1%3a17.0.6-18_arm64.deb ... 297s Unpacking libllvm17t64:arm64 (1:17.0.6-18) ... 297s Selecting previously unselected package libamd-comgr2:arm64. 297s Preparing to unpack .../23-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3build2_arm64.deb ... 297s Unpacking libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3build2) ... 298s Selecting previously unselected package libhsakmt1:arm64. 298s Preparing to unpack .../24-libhsakmt1_5.7.0-1build1_arm64.deb ... 298s Unpacking libhsakmt1:arm64 (5.7.0-1build1) ... 298s Selecting previously unselected package libhsa-runtime64-1. 298s Preparing to unpack .../25-libhsa-runtime64-1_5.7.1-2build1_arm64.deb ... 298s Unpacking libhsa-runtime64-1 (5.7.1-2build1) ... 298s Selecting previously unselected package libamdhip64-5. 298s Preparing to unpack .../26-libamdhip64-5_5.7.1-5_arm64.deb ... 298s Unpacking libamdhip64-5 (5.7.1-5) ... 298s Selecting previously unselected package libibumad3:arm64. 298s Preparing to unpack .../27-libibumad3_52.0-2ubuntu1_arm64.deb ... 298s Unpacking libibumad3:arm64 (52.0-2ubuntu1) ... 298s Selecting previously unselected package libibmad5:arm64. 298s Preparing to unpack .../28-libibmad5_52.0-2ubuntu1_arm64.deb ... 298s Unpacking libibmad5:arm64 (52.0-2ubuntu1) ... 298s Selecting previously unselected package libucx0:arm64. 298s Preparing to unpack .../29-libucx0_1.17.0+ds-3build1_arm64.deb ... 298s Unpacking libucx0:arm64 (1.17.0+ds-3build1) ... 298s Selecting previously unselected package libopenmpi3t64:arm64. 298s Preparing to unpack .../30-libopenmpi3t64_5.0.5-6_arm64.deb ... 298s Unpacking libopenmpi3t64:arm64 (5.0.5-6) ... 298s Selecting previously unselected package libhdf5-openmpi-103-1t64:arm64. 298s Preparing to unpack .../31-libhdf5-openmpi-103-1t64_1.10.10+repack-4ubuntu3_arm64.deb ... 298s Unpacking libhdf5-openmpi-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 298s Selecting previously unselected package bitshuffle. 298s Preparing to unpack .../32-bitshuffle_0.5.2-1_arm64.deb ... 298s Unpacking bitshuffle (0.5.2-1) ... 298s Selecting previously unselected package hdf5-tools. 298s Preparing to unpack .../33-hdf5-tools_1.10.10+repack-4ubuntu3_arm64.deb ... 298s Unpacking hdf5-tools (1.10.10+repack-4ubuntu3) ... 298s Selecting previously unselected package python3-all. 298s Preparing to unpack .../34-python3-all_3.12.6-0ubuntu1_arm64.deb ... 298s Unpacking python3-all (3.12.6-0ubuntu1) ... 298s Selecting previously unselected package python3-iniconfig. 298s Preparing to unpack .../35-python3-iniconfig_1.1.1-2_all.deb ... 298s Unpacking python3-iniconfig (1.1.1-2) ... 298s Selecting previously unselected package python3-packaging. 298s Preparing to unpack .../36-python3-packaging_24.2-1_all.deb ... 298s Unpacking python3-packaging (24.2-1) ... 298s Selecting previously unselected package python3-pluggy. 298s Preparing to unpack .../37-python3-pluggy_1.5.0-1_all.deb ... 298s Unpacking python3-pluggy (1.5.0-1) ... 299s Selecting previously unselected package python3-pytest. 299s Preparing to unpack .../38-python3-pytest_8.3.3-1_all.deb ... 299s Unpacking python3-pytest (8.3.3-1) ... 299s Setting up python3-iniconfig (1.1.1-2) ... 299s Setting up libpciaccess0:arm64 (0.17-3build1) ... 299s Setting up libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10) ... 299s Setting up libibumad3:arm64 (52.0-2ubuntu1) ... 299s Setting up python3-all (3.12.6-0ubuntu1) ... 299s Setting up libibmad5:arm64 (52.0-2ubuntu1) ... 299s Setting up libgomp1:arm64 (14.2.0-9ubuntu1) ... 299s Setting up libaec0:arm64 (1.1.3-1) ... 299s Setting up libxnvctrl0:arm64 (510.47.03-0ubuntu4) ... 299s Setting up libblas3:arm64 (3.12.0-4) ... 299s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 299s Setting up python3-packaging (24.2-1) ... 299s Setting up libmunge2:arm64 (0.5.15-4build1) ... 299s Setting up libllvm17t64:arm64 (1:17.0.6-18) ... 299s Setting up liblzf1:arm64 (3.6-4) ... 299s Setting up libhwloc15:arm64 (2.11.2-1) ... 299s Setting up libgfortran5:arm64 (14.2.0-9ubuntu1) ... 299s Setting up python3-pluggy (1.5.0-1) ... 299s Setting up ocl-icd-libopencl1:arm64 (2.3.2-1build1) ... 299s Setting up librdmacm1t64:arm64 (52.0-2ubuntu1) ... 299s Setting up libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3build2) ... 299s Setting up libhsakmt1:arm64 (5.7.0-1build1) ... 299s Setting up libsz2:arm64 (1.1.3-1) ... 299s Setting up libfabric1:arm64 (1.17.0-3ubuntu1) ... 299s Setting up liblapack3:arm64 (3.12.0-4) ... 299s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 299s Setting up python3-pytest (8.3.3-1) ... 299s Setting up libhwloc-plugins:arm64 (2.11.2-1) ... 299s Setting up libpmix2t64:arm64 (5.0.4-1) ... 299s Setting up python3-numpy (1:1.26.4+ds-11ubuntu1) ... 301s Setting up libhsa-runtime64-1 (5.7.1-2build1) ... 301s Setting up libhdf5-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 301s Setting up libhdf5-hl-100t64:arm64 (1.10.10+repack-4ubuntu3) ... 301s Setting up python3-h5py-serial (3.11.0-8ubuntu3) ... 302s Setting up hdf5-tools (1.10.10+repack-4ubuntu3) ... 302s Setting up libamdhip64-5 (5.7.1-5) ... 302s Setting up python3-h5py (3.11.0-8ubuntu3) ... 302s Setting up libucx0:arm64 (1.17.0+ds-3build1) ... 302s Setting up libopenmpi3t64:arm64 (5.0.5-6) ... 302s Setting up libhdf5-openmpi-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 302s Setting up bitshuffle (0.5.2-1) ... 302s Processing triggers for man-db (2.13.0-1) ... 303s Processing triggers for libc-bin (2.40-1ubuntu3) ... 305s autopkgtest [14:42:08]: test testsuite: [----------------------- 305s 'tests' -> '/tmp/autopkgtest.dkr8pq/autopkgtest_tmp/tests' 305s 'tests/test_ext.py' -> '/tmp/autopkgtest.dkr8pq/autopkgtest_tmp/tests/test_ext.py' 305s 'tests/test_regression.py' -> '/tmp/autopkgtest.dkr8pq/autopkgtest_tmp/tests/test_regression.py' 305s 'tests/test_h5plugin.py' -> '/tmp/autopkgtest.dkr8pq/autopkgtest_tmp/tests/test_h5plugin.py' 305s 'tests/data' -> '/tmp/autopkgtest.dkr8pq/autopkgtest_tmp/tests/data' 305s 'tests/data/regression_0.4.0.h5' -> '/tmp/autopkgtest.dkr8pq/autopkgtest_tmp/tests/data/regression_0.4.0.h5' 305s 'tests/data/regression_0.1.3.h5' -> '/tmp/autopkgtest.dkr8pq/autopkgtest_tmp/tests/data/regression_0.1.3.h5' 305s 'tests/make_regression_tdata.py' -> '/tmp/autopkgtest.dkr8pq/autopkgtest_tmp/tests/make_regression_tdata.py' 305s 'tests/test_h5filter.py' -> '/tmp/autopkgtest.dkr8pq/autopkgtest_tmp/tests/test_h5filter.py' 305s [*] testing on python3.12: 305s ============================= test session starts ============================== 305s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3.12 305s cachedir: .pytest_cache 305s rootdir: /tmp/autopkgtest.dkr8pq/autopkgtest_tmp 305s plugins: typeguard-4.4.1 305s collecting ... collected 80 items 305s 305s tests/test_ext.py::TestProfile::test_00_copy PASSED [ 1%] 305s tests/test_ext.py::TestProfile::test_01a_trans_byte_elem_scal_16 PASSED [ 2%] 305s tests/test_ext.py::TestProfile::test_01b_trans_byte_elem_scal_32 PASSED [ 3%] 305s tests/test_ext.py::TestProfile::test_01c_trans_byte_elem_scal_64 PASSED [ 5%] 305s tests/test_ext.py::TestProfile::test_01d_trans_byte_elem_16 PASSED [ 6%] 305s tests/test_ext.py::TestProfile::test_01e_trans_byte_elem_32 PASSED [ 7%] 305s tests/test_ext.py::TestProfile::test_01f_trans_byte_elem_64 PASSED [ 8%] 305s tests/test_ext.py::TestProfile::test_01g_trans_byte_elem_128 PASSED [ 10%] 305s tests/test_ext.py::TestProfile::test_01h_trans_byte_elem_96 PASSED [ 11%] 305s tests/test_ext.py::TestProfile::test_01i_trans_byte_elem_80 PASSED [ 12%] 305s tests/test_ext.py::TestProfile::test_03a_trans_bit_byte PASSED [ 13%] 305s tests/test_ext.py::TestProfile::test_03d_trans_bit_byte_SSE PASSED [ 15%] 305s tests/test_ext.py::TestProfile::test_03f_trans_bit_byte_AVX PASSED [ 16%] 305s tests/test_ext.py::TestProfile::test_03g_trans_bit_byte_AVX512_32 PASSED [ 17%] 305s tests/test_ext.py::TestProfile::test_03g_trans_bit_byte_AVX_32 PASSED [ 18%] 305s tests/test_ext.py::TestProfile::test_03h_trans_bit_byte_AVX512 PASSED [ 20%] 305s tests/test_ext.py::TestProfile::test_04a_trans_bit_elem_AVX PASSED [ 21%] 305s tests/test_ext.py::TestProfile::test_04b_trans_bit_elem_AVX_128 PASSED [ 22%] 305s tests/test_ext.py::TestProfile::test_04c_trans_bit_elem_AVX_32 PASSED [ 23%] 305s tests/test_ext.py::TestProfile::test_04d_trans_bit_elem_AVX_16 PASSED [ 25%] 305s tests/test_ext.py::TestProfile::test_04e_trans_bit_elem_64 PASSED [ 26%] 305s tests/test_ext.py::TestProfile::test_04f_trans_bit_elem_SSE_32 PASSED [ 27%] 305s tests/test_ext.py::TestProfile::test_04g_trans_bit_elem_SSE_64 PASSED [ 28%] 305s tests/test_ext.py::TestProfile::test_04h_trans_bit_elem_AVX512 PASSED [ 30%] 305s tests/test_ext.py::TestProfile::test_04i_trans_bit_elem_AVX512 PASSED [ 31%] 305s tests/test_ext.py::TestProfile::test_04j_trans_bit_elem_AVX512_32 PASSED [ 32%] 305s tests/test_ext.py::TestProfile::test_04k_trans_bit_elem_AVX512_16 PASSED [ 33%] 305s tests/test_ext.py::TestProfile::test_06a_untrans_bit_elem_16 PASSED [ 35%] 305s tests/test_ext.py::TestProfile::test_06b_untrans_bit_elem_128 PASSED [ 36%] 305s tests/test_ext.py::TestProfile::test_06c_untrans_bit_elem_32 PASSED [ 37%] 305s tests/test_ext.py::TestProfile::test_06d_untrans_bit_elem_32 PASSED [ 38%] 305s tests/test_ext.py::TestProfile::test_06e_untrans_bit_elem_64 PASSED [ 40%] 305s tests/test_ext.py::TestProfile::test_06f_untrans_bit_elem_64 PASSED [ 41%] 305s tests/test_ext.py::TestProfile::test_06g_untrans_bit_elem_64 PASSED [ 42%] 305s tests/test_ext.py::TestProfile::test_06h_untrans_bit_elem_32 PASSED [ 43%] 305s tests/test_ext.py::TestProfile::test_06i_untrans_bit_elem_64 PASSED [ 45%] 305s tests/test_ext.py::TestProfile::test_07a_trans_byte_bitrow_64 PASSED [ 46%] 305s tests/test_ext.py::TestProfile::test_07b_trans_byte_bitrow_SSE_64 PASSED [ 47%] 305s tests/test_ext.py::TestProfile::test_07c_trans_byte_bitrow_AVX_64 PASSED [ 48%] 305s tests/test_ext.py::TestProfile::test_08a_shuffle_bit_eight_scal_64 PASSED [ 50%] 305s tests/test_ext.py::TestProfile::test_08b_shuffle_bit_eight_SSE_64 PASSED [ 51%] 305s tests/test_ext.py::TestProfile::test_08c_shuffle_bit_eight_AVX_32 PASSED [ 52%] 305s tests/test_ext.py::TestProfile::test_08d_shuffle_bit_eight_AVX_64 PASSED [ 53%] 305s tests/test_ext.py::TestProfile::test_08e_shuffle_bit_eight_AVX_16 PASSED [ 55%] 305s tests/test_ext.py::TestProfile::test_08f_shuffle_bit_eight_AVX_128 PASSED [ 56%] 305s tests/test_ext.py::TestProfile::test_08g_shuffle_bit_eight_AVX512_32 PASSED [ 57%] 305s tests/test_ext.py::TestProfile::test_08h_shuffle_bit_eight_AVX512_64 PASSED [ 58%] 305s tests/test_ext.py::TestProfile::test_08i_shuffle_bit_eight_AVX512_128 PASSED [ 60%] 305s tests/test_ext.py::TestProfile::test_08i_shuffle_bit_eight_AVX512_16 PASSED [ 61%] 305s tests/test_ext.py::TestProfile::test_09a_trans_bit_elem_scal_64 PASSED [ 62%] 305s tests/test_ext.py::TestProfile::test_09b_trans_bit_elem_SSE_64 PASSED [ 63%] 305s tests/test_ext.py::TestProfile::test_09c_trans_bit_elem_AVX_64 PASSED [ 65%] 305s tests/test_ext.py::TestProfile::test_09d_untrans_bit_elem_scal_64 PASSED [ 66%] 305s tests/test_ext.py::TestProfile::test_09e_untrans_bit_elem_SSE_64 PASSED [ 67%] 305s tests/test_ext.py::TestProfile::test_09f_untrans_bit_elem_AVX_64 PASSED [ 68%] 305s tests/test_ext.py::TestProfile::test_09g_untrans_bit_elem_AVX_64 PASSED [ 70%] 305s tests/test_ext.py::TestProfile::test_10a_bitshuffle_64 PASSED [ 71%] 305s tests/test_ext.py::TestProfile::test_10b_bitunshuffle_64 PASSED [ 72%] 305s tests/test_ext.py::TestProfile::test_10c_compress_64 PASSED [ 73%] 305s tests/test_ext.py::TestProfile::test_10c_compress_z64 PASSED [ 75%] 305s tests/test_ext.py::TestProfile::test_10d_decompress_64 PASSED [ 76%] 305s tests/test_ext.py::TestProfile::test_10d_decompress_z64 PASSED [ 77%] 305s tests/test_ext.py::TestOddLengths::test_trans_bit_elem_AVX PASSED [ 78%] 305s tests/test_ext.py::TestOddLengths::test_trans_bit_elem_AVX512 PASSED [ 80%] 305s tests/test_ext.py::TestOddLengths::test_trans_bit_elem_SSE PASSED [ 81%] 306s tests/test_ext.py::TestOddLengths::test_trans_bit_elem_scal PASSED [ 82%] 306s tests/test_ext.py::TestOddLengths::test_trans_byte_elem_SSE PASSED [ 83%] 306s tests/test_ext.py::TestOddLengths::test_untrans_bit_elem_AVX PASSED [ 85%] 306s tests/test_ext.py::TestOddLengths::test_untrans_bit_elem_AVX512 PASSED [ 86%] 306s tests/test_ext.py::TestOddLengths::test_untrans_bit_elem_SSE PASSED [ 87%] 306s tests/test_ext.py::TestOddLengths::test_untrans_bit_elem_scal PASSED [ 88%] 307s tests/test_ext.py::TestBitShuffleCircle::test_circle PASSED [ 90%] 308s tests/test_ext.py::TestBitShuffleCircle::test_circle_with_compression PASSED [ 91%] 309s tests/test_ext.py::TestBitShuffleCircle::test_circle_with_zstd_compression PASSED [ 92%] 309s tests/test_h5filter.py::TestFilter::test_filter PASSED [ 93%] 309s tests/test_h5filter.py::TestFilter::test_with_block_size PASSED [ 95%] 309s tests/test_h5filter.py::TestFilter::test_with_lz4_compression PASSED [ 96%] 309s tests/test_h5filter.py::TestFilter::test_with_zstd_compression PASSED [ 97%] 309s tests/test_h5plugin.py::TestFilterPlugins::test_plugins PASSED [ 98%] 309s tests/test_regression.py::TestAll::test_regression PASSED [100%] 309s 309s ============================== 80 passed in 3.99s ============================== 310s autopkgtest [14:42:13]: test testsuite: -----------------------] 310s testsuite PASS 310s autopkgtest [14:42:13]: test testsuite: - - - - - - - - - - results - - - - - - - - - - 310s autopkgtest [14:42:13]: @@@@@@@@@@@@@@@@@@@@ summary 310s command1 PASS 310s command2 PASS 310s testsuite PASS 365s nova [W] Using flock in prodstack6-arm64 365s flock: timeout while waiting to get lock 365s Creating nova instance adt-plucky-arm64-bitshuffle-20241204-143703-juju-7f2275-prod-proposed-migration-environment-20-be74a9b1-0bc7-4f02-9c86-cf710d0e6584 from image adt/ubuntu-plucky-arm64-server-20241204.img (UUID b1e2b1c6-409a-4f80-af2b-468b6b2bbda4)... 365s nova [W] Using flock in prodstack6-arm64 365s Creating nova instance adt-plucky-arm64-bitshuffle-20241204-143703-juju-7f2275-prod-proposed-migration-environment-20-be74a9b1-0bc7-4f02-9c86-cf710d0e6584 from image adt/ubuntu-plucky-arm64-server-20241204.img (UUID b1e2b1c6-409a-4f80-af2b-468b6b2bbda4)...