0s autopkgtest [08:56:29]: starting date and time: 2024-11-13 08:56:29+0000 0s autopkgtest [08:56:29]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [08:56:29]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.1n22ad9v/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade bitshuffle --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-arm64-11.secgroup --name adt-plucky-arm64-bitshuffle-20241113-084946-juju-7f2275-prod-proposed-migration-environment-15-b42ed28a-0e3e-4483-8b2d-6dbeec599940 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 67s autopkgtest [08:57:36]: testbed dpkg architecture: arm64 67s autopkgtest [08:57:36]: testbed apt version: 2.9.8 67s autopkgtest [08:57:36]: @@@@@@@@@@@@@@@@@@@@ test bed setup 68s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 68s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB] 68s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB] 68s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 68s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [849 kB] 68s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [104 kB] 68s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 68s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [601 kB] 68s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [17.1 kB] 69s Fetched 1793 kB in 1s (2025 kB/s) 69s Reading package lists... 72s Reading package lists... 72s Building dependency tree... 72s Reading state information... 72s Calculating upgrade... 73s The following NEW packages will be installed: 73s python3.13-gdbm 73s The following packages will be upgraded: 73s libpython3-stdlib python3 python3-gdbm python3-minimal 73s 4 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 73s Need to get 101 kB of archives. 73s After this operation, 141 kB of additional disk space will be used. 73s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-minimal arm64 3.12.7-1 [27.4 kB] 73s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3 arm64 3.12.7-1 [24.0 kB] 73s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpython3-stdlib arm64 3.12.7-1 [10.0 kB] 73s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-gdbm arm64 3.13.0-2 [30.7 kB] 73s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-gdbm arm64 3.12.7-1 [8642 B] 74s Fetched 101 kB in 0s (280 kB/s) 74s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 74s Preparing to unpack .../python3-minimal_3.12.7-1_arm64.deb ... 74s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 74s Setting up python3-minimal (3.12.7-1) ... 74s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 74s Preparing to unpack .../python3_3.12.7-1_arm64.deb ... 74s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 74s Preparing to unpack .../libpython3-stdlib_3.12.7-1_arm64.deb ... 74s Unpacking libpython3-stdlib:arm64 (3.12.7-1) over (3.12.6-0ubuntu1) ... 74s Selecting previously unselected package python3.13-gdbm. 74s Preparing to unpack .../python3.13-gdbm_3.13.0-2_arm64.deb ... 74s Unpacking python3.13-gdbm (3.13.0-2) ... 74s Preparing to unpack .../python3-gdbm_3.12.7-1_arm64.deb ... 74s Unpacking python3-gdbm:arm64 (3.12.7-1) over (3.12.6-1ubuntu1) ... 75s Setting up python3.13-gdbm (3.13.0-2) ... 75s Setting up libpython3-stdlib:arm64 (3.12.7-1) ... 75s Setting up python3 (3.12.7-1) ... 75s Setting up python3-gdbm:arm64 (3.12.7-1) ... 75s Processing triggers for man-db (2.12.1-3) ... 76s Reading package lists... 76s Building dependency tree... 76s Reading state information... 77s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 77s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 77s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 77s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 77s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 78s Reading package lists... 78s Reading package lists... 79s Building dependency tree... 79s Reading state information... 79s Calculating upgrade... 80s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 80s Reading package lists... 80s Building dependency tree... 80s Reading state information... 81s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 84s autopkgtest [08:57:53]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024 84s autopkgtest [08:57:53]: @@@@@@@@@@@@@@@@@@@@ apt-source bitshuffle 85s Get:1 http://ftpmaster.internal/ubuntu plucky/universe bitshuffle 0.5.1-2 (dsc) [2643 B] 85s Get:2 http://ftpmaster.internal/ubuntu plucky/universe bitshuffle 0.5.1-2 (tar) [190 kB] 85s Get:3 http://ftpmaster.internal/ubuntu plucky/universe bitshuffle 0.5.1-2 (diff) [8104 B] 85s gpgv: Signature made Sun Sep 22 08:35:17 2024 UTC 85s gpgv: using RSA key D9B453B799B8830D945E6A0A5BF54E5E12B900BB 85s gpgv: issuer "picca@debian.org" 85s gpgv: Can't check signature: No public key 85s dpkg-source: warning: cannot verify inline signature for ./bitshuffle_0.5.1-2.dsc: no acceptable signature found 86s autopkgtest [08:57:55]: testing package bitshuffle version 0.5.1-2 86s autopkgtest [08:57:55]: build not needed 86s autopkgtest [08:57:55]: test command1: preparing testbed 90s Reading package lists... 91s Building dependency tree... 91s Reading state information... 91s Starting pkgProblemResolver with broken count: 0 91s Starting 2 pkgProblemResolver with broken count: 0 91s Done 92s The following additional packages will be installed: 92s bitshuffle libaec0 libamd-comgr2 libamdhip64-5 libblas3 libdrm-amdgpu1 92s libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 libgomp1 libhdf5-103-1t64 92s libhdf5-hl-100t64 libhdf5-openmpi-103-1t64 libhsa-runtime64-1 libhsakmt1 92s libhwloc-plugins libhwloc15 libibmad5 libibumad3 liblapack3 libllvm17t64 92s liblzf1 libmunge2 libopenmpi3t64 libpciaccess0 libpmix2t64 librdmacm1t64 92s libsz2 libucx0 libxnvctrl0 ocl-icd-libopencl1 python3-h5py 92s python3-h5py-serial python3-numpy 92s Suggested packages: 92s opencl-icd python-h5py-doc gcc gfortran python-numpy-doc python3-dev 92s python3-pytest 92s The following NEW packages will be installed: 92s autopkgtest-satdep bitshuffle libaec0 libamd-comgr2 libamdhip64-5 libblas3 92s libdrm-amdgpu1 libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 libgomp1 92s libhdf5-103-1t64 libhdf5-hl-100t64 libhdf5-openmpi-103-1t64 92s libhsa-runtime64-1 libhsakmt1 libhwloc-plugins libhwloc15 libibmad5 92s libibumad3 liblapack3 libllvm17t64 liblzf1 libmunge2 libopenmpi3t64 92s libpciaccess0 libpmix2t64 librdmacm1t64 libsz2 libucx0 libxnvctrl0 92s ocl-icd-libopencl1 python3-h5py python3-h5py-serial python3-numpy 92s 0 upgraded, 35 newly installed, 0 to remove and 0 not upgraded. 92s Need to get 64.7 MB/64.7 MB of archives. 92s After this operation, 277 MB of additional disk space will be used. 92s Get:1 /tmp/autopkgtest.FGR02D/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [712 B] 92s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-3build2 [152 kB] 92s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-8ubuntu1 [438 kB] 92s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-3build2 [2293 kB] 93s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy arm64 1:1.26.4+ds-11build1 [3654 kB] 93s Get:6 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB] 93s Get:7 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsz2 arm64 1.1.3-1 [5254 B] 93s Get:8 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-103-1t64 arm64 1.10.10+repack-4ubuntu3 [1207 kB] 93s Get:9 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-4ubuntu3 [56.9 kB] 93s Get:10 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblzf1 arm64 3.6-4 [7426 B] 93s Get:11 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-h5py-serial arm64 3.11.0-5ubuntu1 [1064 kB] 93s Get:12 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-h5py all 3.11.0-5ubuntu1 [7974 B] 93s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-8ubuntu1 [145 kB] 93s Get:14 http://ftpmaster.internal/ubuntu plucky/main arm64 libevent-pthreads-2.1-7t64 arm64 2.1.12-stable-10 [7922 B] 93s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 librdmacm1t64 arm64 52.0-2ubuntu1 [71.5 kB] 93s Get:16 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfabric1 arm64 1.17.0-3ubuntu1 [542 kB] 93s Get:17 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhwloc15 arm64 2.11.2-1 [162 kB] 93s Get:18 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmunge2 arm64 0.5.15-4build1 [14.9 kB] 93s Get:19 http://ftpmaster.internal/ubuntu plucky/main arm64 libpciaccess0 arm64 0.17-3build1 [18.9 kB] 93s Get:20 http://ftpmaster.internal/ubuntu plucky/main arm64 libxnvctrl0 arm64 510.47.03-0ubuntu4 [12.4 kB] 93s Get:21 http://ftpmaster.internal/ubuntu plucky/universe arm64 ocl-icd-libopencl1 arm64 2.3.2-1build1 [37.6 kB] 93s Get:22 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhwloc-plugins arm64 2.11.2-1 [15.8 kB] 93s Get:23 http://ftpmaster.internal/ubuntu plucky/universe arm64 libpmix2t64 arm64 5.0.3-2 [662 kB] 93s Get:24 http://ftpmaster.internal/ubuntu plucky/universe arm64 libllvm17t64 arm64 1:17.0.6-18 [24.9 MB] 94s Get:25 http://ftpmaster.internal/ubuntu plucky/universe arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3build2 [14.1 MB] 94s Get:26 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-amdgpu1 arm64 2.4.123-1 [20.9 kB] 94s Get:27 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhsakmt1 arm64 5.7.0-1build1 [63.6 kB] 94s Get:28 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhsa-runtime64-1 arm64 5.7.1-2build1 [286 kB] 94s Get:29 http://ftpmaster.internal/ubuntu plucky/universe arm64 libamdhip64-5 arm64 5.7.1-5 [9704 kB] 94s Get:30 http://ftpmaster.internal/ubuntu plucky/main arm64 libibumad3 arm64 52.0-2ubuntu1 [29.3 kB] 94s Get:31 http://ftpmaster.internal/ubuntu plucky/main arm64 libibmad5 arm64 52.0-2ubuntu1 [43.1 kB] 94s Get:32 http://ftpmaster.internal/ubuntu plucky/universe arm64 libucx0 arm64 1.17.0+ds-3build1 [1093 kB] 94s Get:33 http://ftpmaster.internal/ubuntu plucky/universe arm64 libopenmpi3t64 arm64 4.1.6-13.3ubuntu2 [2487 kB] 94s Get:34 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-openmpi-103-1t64 arm64 1.10.10+repack-4ubuntu3 [1258 kB] 94s Get:35 http://ftpmaster.internal/ubuntu plucky/universe arm64 bitshuffle arm64 0.5.1-2 [154 kB] 95s Fetched 64.7 MB in 3s (25.7 MB/s) 95s Selecting previously unselected package libblas3:arm64. 95s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79931 files and directories currently installed.) 95s Preparing to unpack .../00-libblas3_3.12.0-3build2_arm64.deb ... 95s Unpacking libblas3:arm64 (3.12.0-3build2) ... 95s Selecting previously unselected package libgfortran5:arm64. 95s Preparing to unpack .../01-libgfortran5_14.2.0-8ubuntu1_arm64.deb ... 95s Unpacking libgfortran5:arm64 (14.2.0-8ubuntu1) ... 95s Selecting previously unselected package liblapack3:arm64. 95s Preparing to unpack .../02-liblapack3_3.12.0-3build2_arm64.deb ... 95s Unpacking liblapack3:arm64 (3.12.0-3build2) ... 95s Selecting previously unselected package python3-numpy. 95s Preparing to unpack .../03-python3-numpy_1%3a1.26.4+ds-11build1_arm64.deb ... 95s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 95s Selecting previously unselected package libaec0:arm64. 95s Preparing to unpack .../04-libaec0_1.1.3-1_arm64.deb ... 95s Unpacking libaec0:arm64 (1.1.3-1) ... 95s Selecting previously unselected package libsz2:arm64. 95s Preparing to unpack .../05-libsz2_1.1.3-1_arm64.deb ... 95s Unpacking libsz2:arm64 (1.1.3-1) ... 95s Selecting previously unselected package libhdf5-103-1t64:arm64. 95s Preparing to unpack .../06-libhdf5-103-1t64_1.10.10+repack-4ubuntu3_arm64.deb ... 95s Unpacking libhdf5-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 95s Selecting previously unselected package libhdf5-hl-100t64:arm64. 95s Preparing to unpack .../07-libhdf5-hl-100t64_1.10.10+repack-4ubuntu3_arm64.deb ... 95s Unpacking libhdf5-hl-100t64:arm64 (1.10.10+repack-4ubuntu3) ... 95s Selecting previously unselected package liblzf1:arm64. 95s Preparing to unpack .../08-liblzf1_3.6-4_arm64.deb ... 95s Unpacking liblzf1:arm64 (3.6-4) ... 95s Selecting previously unselected package python3-h5py-serial. 95s Preparing to unpack .../09-python3-h5py-serial_3.11.0-5ubuntu1_arm64.deb ... 95s Unpacking python3-h5py-serial (3.11.0-5ubuntu1) ... 96s Selecting previously unselected package python3-h5py. 96s Preparing to unpack .../10-python3-h5py_3.11.0-5ubuntu1_all.deb ... 96s Unpacking python3-h5py (3.11.0-5ubuntu1) ... 96s Selecting previously unselected package libgomp1:arm64. 96s Preparing to unpack .../11-libgomp1_14.2.0-8ubuntu1_arm64.deb ... 96s Unpacking libgomp1:arm64 (14.2.0-8ubuntu1) ... 96s Selecting previously unselected package libevent-pthreads-2.1-7t64:arm64. 96s Preparing to unpack .../12-libevent-pthreads-2.1-7t64_2.1.12-stable-10_arm64.deb ... 96s Unpacking libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10) ... 96s Selecting previously unselected package librdmacm1t64:arm64. 96s Preparing to unpack .../13-librdmacm1t64_52.0-2ubuntu1_arm64.deb ... 96s Unpacking librdmacm1t64:arm64 (52.0-2ubuntu1) ... 96s Selecting previously unselected package libfabric1:arm64. 96s Preparing to unpack .../14-libfabric1_1.17.0-3ubuntu1_arm64.deb ... 96s Unpacking libfabric1:arm64 (1.17.0-3ubuntu1) ... 96s Selecting previously unselected package libhwloc15:arm64. 96s Preparing to unpack .../15-libhwloc15_2.11.2-1_arm64.deb ... 96s Unpacking libhwloc15:arm64 (2.11.2-1) ... 96s Selecting previously unselected package libmunge2:arm64. 96s Preparing to unpack .../16-libmunge2_0.5.15-4build1_arm64.deb ... 96s Unpacking libmunge2:arm64 (0.5.15-4build1) ... 96s Selecting previously unselected package libpciaccess0:arm64. 96s Preparing to unpack .../17-libpciaccess0_0.17-3build1_arm64.deb ... 96s Unpacking libpciaccess0:arm64 (0.17-3build1) ... 96s Selecting previously unselected package libxnvctrl0:arm64. 96s Preparing to unpack .../18-libxnvctrl0_510.47.03-0ubuntu4_arm64.deb ... 96s Unpacking libxnvctrl0:arm64 (510.47.03-0ubuntu4) ... 96s Selecting previously unselected package ocl-icd-libopencl1:arm64. 96s Preparing to unpack .../19-ocl-icd-libopencl1_2.3.2-1build1_arm64.deb ... 96s Unpacking ocl-icd-libopencl1:arm64 (2.3.2-1build1) ... 96s Selecting previously unselected package libhwloc-plugins:arm64. 96s Preparing to unpack .../20-libhwloc-plugins_2.11.2-1_arm64.deb ... 96s Unpacking libhwloc-plugins:arm64 (2.11.2-1) ... 96s Selecting previously unselected package libpmix2t64:arm64. 96s Preparing to unpack .../21-libpmix2t64_5.0.3-2_arm64.deb ... 96s Unpacking libpmix2t64:arm64 (5.0.3-2) ... 96s Selecting previously unselected package libllvm17t64:arm64. 96s Preparing to unpack .../22-libllvm17t64_1%3a17.0.6-18_arm64.deb ... 96s Unpacking libllvm17t64:arm64 (1:17.0.6-18) ... 97s Selecting previously unselected package libamd-comgr2:arm64. 97s Preparing to unpack .../23-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3build2_arm64.deb ... 97s Unpacking libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3build2) ... 97s Selecting previously unselected package libdrm-amdgpu1:arm64. 97s Preparing to unpack .../24-libdrm-amdgpu1_2.4.123-1_arm64.deb ... 97s Unpacking libdrm-amdgpu1:arm64 (2.4.123-1) ... 97s Selecting previously unselected package libhsakmt1:arm64. 97s Preparing to unpack .../25-libhsakmt1_5.7.0-1build1_arm64.deb ... 97s Unpacking libhsakmt1:arm64 (5.7.0-1build1) ... 97s Selecting previously unselected package libhsa-runtime64-1. 97s Preparing to unpack .../26-libhsa-runtime64-1_5.7.1-2build1_arm64.deb ... 97s Unpacking libhsa-runtime64-1 (5.7.1-2build1) ... 97s Selecting previously unselected package libamdhip64-5. 97s Preparing to unpack .../27-libamdhip64-5_5.7.1-5_arm64.deb ... 97s Unpacking libamdhip64-5 (5.7.1-5) ... 97s Selecting previously unselected package libibumad3:arm64. 97s Preparing to unpack .../28-libibumad3_52.0-2ubuntu1_arm64.deb ... 97s Unpacking libibumad3:arm64 (52.0-2ubuntu1) ... 97s Selecting previously unselected package libibmad5:arm64. 97s Preparing to unpack .../29-libibmad5_52.0-2ubuntu1_arm64.deb ... 97s Unpacking libibmad5:arm64 (52.0-2ubuntu1) ... 97s Selecting previously unselected package libucx0:arm64. 97s Preparing to unpack .../30-libucx0_1.17.0+ds-3build1_arm64.deb ... 97s Unpacking libucx0:arm64 (1.17.0+ds-3build1) ... 97s Selecting previously unselected package libopenmpi3t64:arm64. 97s Preparing to unpack .../31-libopenmpi3t64_4.1.6-13.3ubuntu2_arm64.deb ... 97s Unpacking libopenmpi3t64:arm64 (4.1.6-13.3ubuntu2) ... 97s Selecting previously unselected package libhdf5-openmpi-103-1t64:arm64. 98s Preparing to unpack .../32-libhdf5-openmpi-103-1t64_1.10.10+repack-4ubuntu3_arm64.deb ... 98s Unpacking libhdf5-openmpi-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 98s Selecting previously unselected package bitshuffle. 98s Preparing to unpack .../33-bitshuffle_0.5.1-2_arm64.deb ... 98s Unpacking bitshuffle (0.5.1-2) ... 98s Selecting previously unselected package autopkgtest-satdep. 98s Preparing to unpack .../34-1-autopkgtest-satdep.deb ... 98s Unpacking autopkgtest-satdep (0) ... 98s Setting up libpciaccess0:arm64 (0.17-3build1) ... 98s Setting up libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10) ... 98s Setting up libibumad3:arm64 (52.0-2ubuntu1) ... 98s Setting up libibmad5:arm64 (52.0-2ubuntu1) ... 98s Setting up libgomp1:arm64 (14.2.0-8ubuntu1) ... 98s Setting up libaec0:arm64 (1.1.3-1) ... 98s Setting up libxnvctrl0:arm64 (510.47.03-0ubuntu4) ... 98s Setting up libblas3:arm64 (3.12.0-3build2) ... 98s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 98s Setting up libmunge2:arm64 (0.5.15-4build1) ... 98s Setting up libllvm17t64:arm64 (1:17.0.6-18) ... 98s Setting up liblzf1:arm64 (3.6-4) ... 98s Setting up libhwloc15:arm64 (2.11.2-1) ... 98s Setting up libgfortran5:arm64 (14.2.0-8ubuntu1) ... 98s Setting up ocl-icd-libopencl1:arm64 (2.3.2-1build1) ... 98s Setting up librdmacm1t64:arm64 (52.0-2ubuntu1) ... 98s Setting up libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3build2) ... 98s Setting up libsz2:arm64 (1.1.3-1) ... 98s Setting up libdrm-amdgpu1:arm64 (2.4.123-1) ... 98s Setting up libfabric1:arm64 (1.17.0-3ubuntu1) ... 98s Setting up liblapack3:arm64 (3.12.0-3build2) ... 98s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 98s Setting up libhwloc-plugins:arm64 (2.11.2-1) ... 98s Setting up libpmix2t64:arm64 (5.0.3-2) ... 98s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 100s Setting up libhdf5-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 100s Setting up libhsakmt1:arm64 (5.7.0-1build1) ... 100s Setting up libhdf5-hl-100t64:arm64 (1.10.10+repack-4ubuntu3) ... 100s Setting up python3-h5py-serial (3.11.0-5ubuntu1) ... 100s Setting up python3-h5py (3.11.0-5ubuntu1) ... 100s Setting up libhsa-runtime64-1 (5.7.1-2build1) ... 100s Setting up libamdhip64-5 (5.7.1-5) ... 100s Setting up libucx0:arm64 (1.17.0+ds-3build1) ... 100s Setting up libopenmpi3t64:arm64 (4.1.6-13.3ubuntu2) ... 100s Setting up libhdf5-openmpi-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 100s Setting up bitshuffle (0.5.1-2) ... 100s Setting up autopkgtest-satdep (0) ... 100s Processing triggers for man-db (2.12.1-3) ... 101s Processing triggers for libc-bin (2.40-1ubuntu3) ... 104s (Reading database ... 81357 files and directories currently installed.) 104s Removing autopkgtest-satdep (0) ... 105s autopkgtest [08:58:14]: test command1: python3 -c 'import sys, h5py; sys.exit(not h5py.h5z.filter_avail(32008))' 105s autopkgtest [08:58:14]: test command1: [----------------------- 106s autopkgtest [08:58:15]: test command1: -----------------------] 106s autopkgtest [08:58:15]: test command1: - - - - - - - - - - results - - - - - - - - - - 106s command1 PASS 107s autopkgtest [08:58:16]: test command2: preparing testbed 109s Reading package lists... 109s Building dependency tree... 109s Reading state information... 109s Starting pkgProblemResolver with broken count: 0 109s Starting 2 pkgProblemResolver with broken count: 0 109s Done 110s The following NEW packages will be installed: 110s autopkgtest-satdep 110s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 110s Need to get 0 B/712 B of archives. 110s After this operation, 0 B of additional disk space will be used. 110s Get:1 /tmp/autopkgtest.FGR02D/2-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [712 B] 111s Selecting previously unselected package autopkgtest-satdep. 111s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81357 files and directories currently installed.) 111s Preparing to unpack .../2-autopkgtest-satdep.deb ... 111s Unpacking autopkgtest-satdep (0) ... 111s Setting up autopkgtest-satdep (0) ... 113s (Reading database ... 81357 files and directories currently installed.) 113s Removing autopkgtest-satdep (0) ... 114s autopkgtest [08:58:23]: test command2: H5PY_ALWAYS_USE_MPI=1 python3 -c 'import sys, h5py; sys.exit(not h5py.h5z.filter_avail(32008))' 114s autopkgtest [08:58:23]: test command2: [----------------------- 115s autopkgtest [08:58:24]: test command2: -----------------------] 115s command2 PASS 115s autopkgtest [08:58:24]: test command2: - - - - - - - - - - results - - - - - - - - - - 115s autopkgtest [08:58:24]: test testsuite: preparing testbed 192s autopkgtest [08:59:41]: testbed dpkg architecture: arm64 192s autopkgtest [08:59:41]: testbed apt version: 2.9.8 192s autopkgtest [08:59:41]: @@@@@@@@@@@@@@@@@@@@ test bed setup 193s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 194s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [849 kB] 194s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB] 194s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB] 194s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 194s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [104 kB] 194s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 194s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [601 kB] 194s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [17.1 kB] 194s Fetched 1793 kB in 1s (2127 kB/s) 194s Reading package lists... 197s Reading package lists... 197s Building dependency tree... 197s Reading state information... 198s Calculating upgrade... 198s The following NEW packages will be installed: 198s python3.13-gdbm 198s The following packages will be upgraded: 198s libpython3-stdlib python3 python3-gdbm python3-minimal 198s 4 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 198s Need to get 101 kB of archives. 198s After this operation, 141 kB of additional disk space will be used. 198s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-minimal arm64 3.12.7-1 [27.4 kB] 198s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3 arm64 3.12.7-1 [24.0 kB] 198s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpython3-stdlib arm64 3.12.7-1 [10.0 kB] 198s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-gdbm arm64 3.13.0-2 [30.7 kB] 198s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-gdbm arm64 3.12.7-1 [8642 B] 199s Fetched 101 kB in 0s (296 kB/s) 199s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 199s Preparing to unpack .../python3-minimal_3.12.7-1_arm64.deb ... 199s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 199s Setting up python3-minimal (3.12.7-1) ... 199s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 199s Preparing to unpack .../python3_3.12.7-1_arm64.deb ... 199s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 200s Preparing to unpack .../libpython3-stdlib_3.12.7-1_arm64.deb ... 200s Unpacking libpython3-stdlib:arm64 (3.12.7-1) over (3.12.6-0ubuntu1) ... 200s Selecting previously unselected package python3.13-gdbm. 200s Preparing to unpack .../python3.13-gdbm_3.13.0-2_arm64.deb ... 200s Unpacking python3.13-gdbm (3.13.0-2) ... 200s Preparing to unpack .../python3-gdbm_3.12.7-1_arm64.deb ... 200s Unpacking python3-gdbm:arm64 (3.12.7-1) over (3.12.6-1ubuntu1) ... 200s Setting up python3.13-gdbm (3.13.0-2) ... 200s Setting up libpython3-stdlib:arm64 (3.12.7-1) ... 200s Setting up python3 (3.12.7-1) ... 200s Setting up python3-gdbm:arm64 (3.12.7-1) ... 200s Processing triggers for man-db (2.12.1-3) ... 201s Reading package lists... 201s Building dependency tree... 201s Reading state information... 202s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 202s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 202s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 202s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 202s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 203s Reading package lists... 203s Reading package lists... 204s Building dependency tree... 204s Reading state information... 204s Calculating upgrade... 205s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 205s Reading package lists... 205s Building dependency tree... 205s Reading state information... 206s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 209s Reading package lists... 210s Building dependency tree... 210s Reading state information... 210s Starting pkgProblemResolver with broken count: 0 210s Starting 2 pkgProblemResolver with broken count: 0 210s Done 211s The following additional packages will be installed: 211s bitshuffle hdf5-tools libaec0 libamd-comgr2 libamdhip64-5 libblas3 211s libdrm-amdgpu1 libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 libgomp1 211s libhdf5-103-1t64 libhdf5-hl-100t64 libhdf5-openmpi-103-1t64 211s libhsa-runtime64-1 libhsakmt1 libhwloc-plugins libhwloc15 libibmad5 211s libibumad3 liblapack3 libllvm17t64 liblzf1 libmunge2 libopenmpi3t64 211s libpciaccess0 libpmix2t64 libpython3.13-minimal libpython3.13-stdlib 211s librdmacm1t64 libsz2 libucx0 libxnvctrl0 ocl-icd-libopencl1 python3-all 211s python3-h5py python3-h5py-serial python3-iniconfig python3-numpy 211s python3-packaging python3-pluggy python3-pytest python3.13 211s python3.13-minimal 211s Suggested packages: 211s opencl-icd python-h5py-doc gcc gfortran python-numpy-doc python3-dev 211s python3.13-venv python3.13-doc binfmt-support 211s The following NEW packages will be installed: 211s autopkgtest-satdep bitshuffle hdf5-tools libaec0 libamd-comgr2 libamdhip64-5 211s libblas3 libdrm-amdgpu1 libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 211s libgomp1 libhdf5-103-1t64 libhdf5-hl-100t64 libhdf5-openmpi-103-1t64 211s libhsa-runtime64-1 libhsakmt1 libhwloc-plugins libhwloc15 libibmad5 211s libibumad3 liblapack3 libllvm17t64 liblzf1 libmunge2 libopenmpi3t64 211s libpciaccess0 libpmix2t64 libpython3.13-minimal libpython3.13-stdlib 211s librdmacm1t64 libsz2 libucx0 libxnvctrl0 ocl-icd-libopencl1 python3-all 211s python3-h5py python3-h5py-serial python3-iniconfig python3-numpy 211s python3-packaging python3-pluggy python3-pytest python3.13 211s python3.13-minimal 211s 0 upgraded, 45 newly installed, 0 to remove and 0 not upgraded. 211s Need to get 71.1 MB/71.1 MB of archives. 211s After this operation, 304 MB of additional disk space will be used. 211s Get:1 /tmp/autopkgtest.FGR02D/3-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [736 B] 211s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-minimal arm64 3.13.0-2 [877 kB] 211s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-minimal arm64 3.13.0-2 [2100 kB] 211s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libblas3 arm64 3.12.0-3build2 [152 kB] 211s Get:5 http://ftpmaster.internal/ubuntu plucky/main arm64 libgfortran5 arm64 14.2.0-8ubuntu1 [438 kB] 212s Get:6 http://ftpmaster.internal/ubuntu plucky/main arm64 liblapack3 arm64 3.12.0-3build2 [2293 kB] 212s Get:7 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-numpy arm64 1:1.26.4+ds-11build1 [3654 kB] 212s Get:8 http://ftpmaster.internal/ubuntu plucky/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB] 212s Get:9 http://ftpmaster.internal/ubuntu plucky/universe arm64 libsz2 arm64 1.1.3-1 [5254 B] 212s Get:10 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-103-1t64 arm64 1.10.10+repack-4ubuntu3 [1207 kB] 212s Get:11 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-4ubuntu3 [56.9 kB] 212s Get:12 http://ftpmaster.internal/ubuntu plucky/universe arm64 liblzf1 arm64 3.6-4 [7426 B] 212s Get:13 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-h5py-serial arm64 3.11.0-5ubuntu1 [1064 kB] 212s Get:14 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-h5py all 3.11.0-5ubuntu1 [7974 B] 212s Get:15 http://ftpmaster.internal/ubuntu plucky/main arm64 libgomp1 arm64 14.2.0-8ubuntu1 [145 kB] 212s Get:16 http://ftpmaster.internal/ubuntu plucky/main arm64 libevent-pthreads-2.1-7t64 arm64 2.1.12-stable-10 [7922 B] 212s Get:17 http://ftpmaster.internal/ubuntu plucky/main arm64 librdmacm1t64 arm64 52.0-2ubuntu1 [71.5 kB] 212s Get:18 http://ftpmaster.internal/ubuntu plucky/universe arm64 libfabric1 arm64 1.17.0-3ubuntu1 [542 kB] 212s Get:19 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhwloc15 arm64 2.11.2-1 [162 kB] 212s Get:20 http://ftpmaster.internal/ubuntu plucky/universe arm64 libmunge2 arm64 0.5.15-4build1 [14.9 kB] 212s Get:21 http://ftpmaster.internal/ubuntu plucky/main arm64 libpciaccess0 arm64 0.17-3build1 [18.9 kB] 212s Get:22 http://ftpmaster.internal/ubuntu plucky/main arm64 libxnvctrl0 arm64 510.47.03-0ubuntu4 [12.4 kB] 212s Get:23 http://ftpmaster.internal/ubuntu plucky/universe arm64 ocl-icd-libopencl1 arm64 2.3.2-1build1 [37.6 kB] 212s Get:24 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhwloc-plugins arm64 2.11.2-1 [15.8 kB] 212s Get:25 http://ftpmaster.internal/ubuntu plucky/universe arm64 libpmix2t64 arm64 5.0.3-2 [662 kB] 212s Get:26 http://ftpmaster.internal/ubuntu plucky/universe arm64 libllvm17t64 arm64 1:17.0.6-18 [24.9 MB] 212s Get:27 http://ftpmaster.internal/ubuntu plucky/universe arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3build2 [14.1 MB] 213s Get:28 http://ftpmaster.internal/ubuntu plucky/main arm64 libdrm-amdgpu1 arm64 2.4.123-1 [20.9 kB] 213s Get:29 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhsakmt1 arm64 5.7.0-1build1 [63.6 kB] 213s Get:30 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhsa-runtime64-1 arm64 5.7.1-2build1 [286 kB] 213s Get:31 http://ftpmaster.internal/ubuntu plucky/universe arm64 libamdhip64-5 arm64 5.7.1-5 [9704 kB] 213s Get:32 http://ftpmaster.internal/ubuntu plucky/main arm64 libibumad3 arm64 52.0-2ubuntu1 [29.3 kB] 213s Get:33 http://ftpmaster.internal/ubuntu plucky/main arm64 libibmad5 arm64 52.0-2ubuntu1 [43.1 kB] 213s Get:34 http://ftpmaster.internal/ubuntu plucky/universe arm64 libucx0 arm64 1.17.0+ds-3build1 [1093 kB] 213s Get:35 http://ftpmaster.internal/ubuntu plucky/universe arm64 libopenmpi3t64 arm64 4.1.6-13.3ubuntu2 [2487 kB] 213s Get:36 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhdf5-openmpi-103-1t64 arm64 1.10.10+repack-4ubuntu3 [1258 kB] 213s Get:37 http://ftpmaster.internal/ubuntu plucky/universe arm64 bitshuffle arm64 0.5.1-2 [154 kB] 213s Get:38 http://ftpmaster.internal/ubuntu plucky/universe arm64 hdf5-tools arm64 1.10.10+repack-4ubuntu3 [319 kB] 213s Get:39 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-stdlib arm64 3.13.0-2 [2073 kB] 213s Get:40 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13 arm64 3.13.0-2 [719 kB] 213s Get:41 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-all arm64 3.12.7-1 [890 B] 213s Get:42 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-iniconfig all 1.1.1-2 [6024 B] 213s Get:43 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-packaging all 24.1-1 [41.4 kB] 213s Get:44 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pluggy all 1.5.0-1 [21.0 kB] 213s Get:45 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pytest all 8.3.3-1 [251 kB] 214s Fetched 71.1 MB in 3s (28.3 MB/s) 214s Selecting previously unselected package libpython3.13-minimal:arm64. 214s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79931 files and directories currently installed.) 214s Preparing to unpack .../00-libpython3.13-minimal_3.13.0-2_arm64.deb ... 214s Unpacking libpython3.13-minimal:arm64 (3.13.0-2) ... 214s Selecting previously unselected package python3.13-minimal. 214s Preparing to unpack .../01-python3.13-minimal_3.13.0-2_arm64.deb ... 214s Unpacking python3.13-minimal (3.13.0-2) ... 214s Selecting previously unselected package libblas3:arm64. 214s Preparing to unpack .../02-libblas3_3.12.0-3build2_arm64.deb ... 214s Unpacking libblas3:arm64 (3.12.0-3build2) ... 214s Selecting previously unselected package libgfortran5:arm64. 214s Preparing to unpack .../03-libgfortran5_14.2.0-8ubuntu1_arm64.deb ... 214s Unpacking libgfortran5:arm64 (14.2.0-8ubuntu1) ... 214s Selecting previously unselected package liblapack3:arm64. 214s Preparing to unpack .../04-liblapack3_3.12.0-3build2_arm64.deb ... 214s Unpacking liblapack3:arm64 (3.12.0-3build2) ... 214s Selecting previously unselected package python3-numpy. 214s Preparing to unpack .../05-python3-numpy_1%3a1.26.4+ds-11build1_arm64.deb ... 214s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 214s Selecting previously unselected package libaec0:arm64. 214s Preparing to unpack .../06-libaec0_1.1.3-1_arm64.deb ... 214s Unpacking libaec0:arm64 (1.1.3-1) ... 214s Selecting previously unselected package libsz2:arm64. 214s Preparing to unpack .../07-libsz2_1.1.3-1_arm64.deb ... 214s Unpacking libsz2:arm64 (1.1.3-1) ... 214s Selecting previously unselected package libhdf5-103-1t64:arm64. 214s Preparing to unpack .../08-libhdf5-103-1t64_1.10.10+repack-4ubuntu3_arm64.deb ... 214s Unpacking libhdf5-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 214s Selecting previously unselected package libhdf5-hl-100t64:arm64. 214s Preparing to unpack .../09-libhdf5-hl-100t64_1.10.10+repack-4ubuntu3_arm64.deb ... 214s Unpacking libhdf5-hl-100t64:arm64 (1.10.10+repack-4ubuntu3) ... 214s Selecting previously unselected package liblzf1:arm64. 214s Preparing to unpack .../10-liblzf1_3.6-4_arm64.deb ... 214s Unpacking liblzf1:arm64 (3.6-4) ... 214s Selecting previously unselected package python3-h5py-serial. 214s Preparing to unpack .../11-python3-h5py-serial_3.11.0-5ubuntu1_arm64.deb ... 214s Unpacking python3-h5py-serial (3.11.0-5ubuntu1) ... 214s Selecting previously unselected package python3-h5py. 214s Preparing to unpack .../12-python3-h5py_3.11.0-5ubuntu1_all.deb ... 214s Unpacking python3-h5py (3.11.0-5ubuntu1) ... 214s Selecting previously unselected package libgomp1:arm64. 214s Preparing to unpack .../13-libgomp1_14.2.0-8ubuntu1_arm64.deb ... 214s Unpacking libgomp1:arm64 (14.2.0-8ubuntu1) ... 214s Selecting previously unselected package libevent-pthreads-2.1-7t64:arm64. 215s Preparing to unpack .../14-libevent-pthreads-2.1-7t64_2.1.12-stable-10_arm64.deb ... 215s Unpacking libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10) ... 215s Selecting previously unselected package librdmacm1t64:arm64. 215s Preparing to unpack .../15-librdmacm1t64_52.0-2ubuntu1_arm64.deb ... 215s Unpacking librdmacm1t64:arm64 (52.0-2ubuntu1) ... 215s Selecting previously unselected package libfabric1:arm64. 215s Preparing to unpack .../16-libfabric1_1.17.0-3ubuntu1_arm64.deb ... 215s Unpacking libfabric1:arm64 (1.17.0-3ubuntu1) ... 215s Selecting previously unselected package libhwloc15:arm64. 215s Preparing to unpack .../17-libhwloc15_2.11.2-1_arm64.deb ... 215s Unpacking libhwloc15:arm64 (2.11.2-1) ... 215s Selecting previously unselected package libmunge2:arm64. 215s Preparing to unpack .../18-libmunge2_0.5.15-4build1_arm64.deb ... 215s Unpacking libmunge2:arm64 (0.5.15-4build1) ... 215s Selecting previously unselected package libpciaccess0:arm64. 215s Preparing to unpack .../19-libpciaccess0_0.17-3build1_arm64.deb ... 215s Unpacking libpciaccess0:arm64 (0.17-3build1) ... 215s Selecting previously unselected package libxnvctrl0:arm64. 215s Preparing to unpack .../20-libxnvctrl0_510.47.03-0ubuntu4_arm64.deb ... 215s Unpacking libxnvctrl0:arm64 (510.47.03-0ubuntu4) ... 215s Selecting previously unselected package ocl-icd-libopencl1:arm64. 215s Preparing to unpack .../21-ocl-icd-libopencl1_2.3.2-1build1_arm64.deb ... 215s Unpacking ocl-icd-libopencl1:arm64 (2.3.2-1build1) ... 215s Selecting previously unselected package libhwloc-plugins:arm64. 215s Preparing to unpack .../22-libhwloc-plugins_2.11.2-1_arm64.deb ... 215s Unpacking libhwloc-plugins:arm64 (2.11.2-1) ... 215s Selecting previously unselected package libpmix2t64:arm64. 215s Preparing to unpack .../23-libpmix2t64_5.0.3-2_arm64.deb ... 215s Unpacking libpmix2t64:arm64 (5.0.3-2) ... 215s Selecting previously unselected package libllvm17t64:arm64. 215s Preparing to unpack .../24-libllvm17t64_1%3a17.0.6-18_arm64.deb ... 215s Unpacking libllvm17t64:arm64 (1:17.0.6-18) ... 215s Selecting previously unselected package libamd-comgr2:arm64. 216s Preparing to unpack .../25-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3build2_arm64.deb ... 216s Unpacking libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3build2) ... 216s Selecting previously unselected package libdrm-amdgpu1:arm64. 216s Preparing to unpack .../26-libdrm-amdgpu1_2.4.123-1_arm64.deb ... 216s Unpacking libdrm-amdgpu1:arm64 (2.4.123-1) ... 216s Selecting previously unselected package libhsakmt1:arm64. 216s Preparing to unpack .../27-libhsakmt1_5.7.0-1build1_arm64.deb ... 216s Unpacking libhsakmt1:arm64 (5.7.0-1build1) ... 216s Selecting previously unselected package libhsa-runtime64-1. 216s Preparing to unpack .../28-libhsa-runtime64-1_5.7.1-2build1_arm64.deb ... 216s Unpacking libhsa-runtime64-1 (5.7.1-2build1) ... 216s Selecting previously unselected package libamdhip64-5. 216s Preparing to unpack .../29-libamdhip64-5_5.7.1-5_arm64.deb ... 216s Unpacking libamdhip64-5 (5.7.1-5) ... 216s Selecting previously unselected package libibumad3:arm64. 216s Preparing to unpack .../30-libibumad3_52.0-2ubuntu1_arm64.deb ... 216s Unpacking libibumad3:arm64 (52.0-2ubuntu1) ... 216s Selecting previously unselected package libibmad5:arm64. 216s Preparing to unpack .../31-libibmad5_52.0-2ubuntu1_arm64.deb ... 216s Unpacking libibmad5:arm64 (52.0-2ubuntu1) ... 216s Selecting previously unselected package libucx0:arm64. 216s Preparing to unpack .../32-libucx0_1.17.0+ds-3build1_arm64.deb ... 216s Unpacking libucx0:arm64 (1.17.0+ds-3build1) ... 216s Selecting previously unselected package libopenmpi3t64:arm64. 216s Preparing to unpack .../33-libopenmpi3t64_4.1.6-13.3ubuntu2_arm64.deb ... 216s Unpacking libopenmpi3t64:arm64 (4.1.6-13.3ubuntu2) ... 216s Selecting previously unselected package libhdf5-openmpi-103-1t64:arm64. 216s Preparing to unpack .../34-libhdf5-openmpi-103-1t64_1.10.10+repack-4ubuntu3_arm64.deb ... 216s Unpacking libhdf5-openmpi-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 216s Selecting previously unselected package bitshuffle. 216s Preparing to unpack .../35-bitshuffle_0.5.1-2_arm64.deb ... 216s Unpacking bitshuffle (0.5.1-2) ... 216s Selecting previously unselected package hdf5-tools. 216s Preparing to unpack .../36-hdf5-tools_1.10.10+repack-4ubuntu3_arm64.deb ... 216s Unpacking hdf5-tools (1.10.10+repack-4ubuntu3) ... 217s Selecting previously unselected package libpython3.13-stdlib:arm64. 217s Preparing to unpack .../37-libpython3.13-stdlib_3.13.0-2_arm64.deb ... 217s Unpacking libpython3.13-stdlib:arm64 (3.13.0-2) ... 217s Selecting previously unselected package python3.13. 217s Preparing to unpack .../38-python3.13_3.13.0-2_arm64.deb ... 217s Unpacking python3.13 (3.13.0-2) ... 217s Selecting previously unselected package python3-all. 217s Preparing to unpack .../39-python3-all_3.12.7-1_arm64.deb ... 217s Unpacking python3-all (3.12.7-1) ... 217s Selecting previously unselected package python3-iniconfig. 217s Preparing to unpack .../40-python3-iniconfig_1.1.1-2_all.deb ... 217s Unpacking python3-iniconfig (1.1.1-2) ... 217s Selecting previously unselected package python3-packaging. 217s Preparing to unpack .../41-python3-packaging_24.1-1_all.deb ... 217s Unpacking python3-packaging (24.1-1) ... 217s Selecting previously unselected package python3-pluggy. 217s Preparing to unpack .../42-python3-pluggy_1.5.0-1_all.deb ... 217s Unpacking python3-pluggy (1.5.0-1) ... 217s Selecting previously unselected package python3-pytest. 217s Preparing to unpack .../43-python3-pytest_8.3.3-1_all.deb ... 217s Unpacking python3-pytest (8.3.3-1) ... 217s Selecting previously unselected package autopkgtest-satdep. 217s Preparing to unpack .../44-3-autopkgtest-satdep.deb ... 217s Unpacking autopkgtest-satdep (0) ... 217s Setting up python3-iniconfig (1.1.1-2) ... 217s Setting up libpciaccess0:arm64 (0.17-3build1) ... 217s Setting up libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10) ... 217s Setting up libibumad3:arm64 (52.0-2ubuntu1) ... 217s Setting up libibmad5:arm64 (52.0-2ubuntu1) ... 217s Setting up libgomp1:arm64 (14.2.0-8ubuntu1) ... 217s Setting up libaec0:arm64 (1.1.3-1) ... 217s Setting up libxnvctrl0:arm64 (510.47.03-0ubuntu4) ... 217s Setting up libpython3.13-minimal:arm64 (3.13.0-2) ... 217s Setting up libblas3:arm64 (3.12.0-3build2) ... 217s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 217s Setting up python3-packaging (24.1-1) ... 218s Setting up libmunge2:arm64 (0.5.15-4build1) ... 218s Setting up libllvm17t64:arm64 (1:17.0.6-18) ... 218s Setting up liblzf1:arm64 (3.6-4) ... 218s Setting up libhwloc15:arm64 (2.11.2-1) ... 218s Setting up libgfortran5:arm64 (14.2.0-8ubuntu1) ... 218s Setting up python3-pluggy (1.5.0-1) ... 218s Setting up ocl-icd-libopencl1:arm64 (2.3.2-1build1) ... 218s Setting up librdmacm1t64:arm64 (52.0-2ubuntu1) ... 218s Setting up python3.13-minimal (3.13.0-2) ... 219s Setting up libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3build2) ... 219s Setting up libpython3.13-stdlib:arm64 (3.13.0-2) ... 219s Setting up libsz2:arm64 (1.1.3-1) ... 219s Setting up libdrm-amdgpu1:arm64 (2.4.123-1) ... 219s Setting up libfabric1:arm64 (1.17.0-3ubuntu1) ... 219s Setting up liblapack3:arm64 (3.12.0-3build2) ... 219s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 219s Setting up python3.13 (3.13.0-2) ... 220s Setting up python3-pytest (8.3.3-1) ... 220s Setting up python3-all (3.12.7-1) ... 220s Setting up libhwloc-plugins:arm64 (2.11.2-1) ... 220s Setting up libpmix2t64:arm64 (5.0.3-2) ... 220s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 224s Setting up libhdf5-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 225s Setting up libhsakmt1:arm64 (5.7.0-1build1) ... 225s Setting up libhdf5-hl-100t64:arm64 (1.10.10+repack-4ubuntu3) ... 225s Setting up python3-h5py-serial (3.11.0-5ubuntu1) ... 225s Setting up hdf5-tools (1.10.10+repack-4ubuntu3) ... 225s Setting up python3-h5py (3.11.0-5ubuntu1) ... 225s Setting up libhsa-runtime64-1 (5.7.1-2build1) ... 225s Setting up libamdhip64-5 (5.7.1-5) ... 225s Setting up libucx0:arm64 (1.17.0+ds-3build1) ... 225s Setting up libopenmpi3t64:arm64 (4.1.6-13.3ubuntu2) ... 225s Setting up libhdf5-openmpi-103-1t64:arm64 (1.10.10+repack-4ubuntu3) ... 225s Setting up bitshuffle (0.5.1-2) ... 225s Setting up autopkgtest-satdep (0) ... 225s Processing triggers for systemd (256.5-2ubuntu4) ... 225s Processing triggers for man-db (2.12.1-3) ... 226s Processing triggers for libc-bin (2.40-1ubuntu3) ... 230s (Reading database ... 82292 files and directories currently installed.) 230s Removing autopkgtest-satdep (0) ... 232s autopkgtest [09:00:21]: test testsuite: [----------------------- 232s 'tests' -> '/tmp/autopkgtest.FGR02D/autopkgtest_tmp/tests' 232s 'tests/test_h5filter.py' -> '/tmp/autopkgtest.FGR02D/autopkgtest_tmp/tests/test_h5filter.py' 232s 'tests/make_regression_tdata.py' -> '/tmp/autopkgtest.FGR02D/autopkgtest_tmp/tests/make_regression_tdata.py' 232s 'tests/test_regression.py' -> '/tmp/autopkgtest.FGR02D/autopkgtest_tmp/tests/test_regression.py' 232s 'tests/test_h5plugin.py' -> '/tmp/autopkgtest.FGR02D/autopkgtest_tmp/tests/test_h5plugin.py' 232s 'tests/data' -> '/tmp/autopkgtest.FGR02D/autopkgtest_tmp/tests/data' 232s 'tests/data/regression_0.1.3.h5' -> '/tmp/autopkgtest.FGR02D/autopkgtest_tmp/tests/data/regression_0.1.3.h5' 232s 'tests/data/regression_0.4.0.h5' -> '/tmp/autopkgtest.FGR02D/autopkgtest_tmp/tests/data/regression_0.4.0.h5' 232s 'tests/test_ext.py' -> '/tmp/autopkgtest.FGR02D/autopkgtest_tmp/tests/test_ext.py' 232s [*] testing on python3.13: 233s ============================= test session starts ============================== 233s platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3.13 233s cachedir: .pytest_cache 233s rootdir: /tmp/autopkgtest.FGR02D/autopkgtest_tmp 233s plugins: typeguard-4.4.1 233s collecting ... collected 0 items / 1 error 233s 233s ==================================== ERRORS ==================================== 233s ______________________ ERROR collecting tests/test_ext.py ______________________ 233s ImportError while importing test module '/tmp/autopkgtest.FGR02D/autopkgtest_tmp/tests/test_ext.py'. 233s Hint: make sure your test modules/packages have valid Python names. 233s Traceback: 233s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 233s from . import multiarray 233s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 233s from . import overrides 233s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 233s from numpy.core._multiarray_umath import ( 233s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 233s 233s During handling of the above exception, another exception occurred: 233s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 233s from numpy.__config__ import show as show_config 233s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 233s from numpy.core._multiarray_umath import ( 233s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 233s raise ImportError(msg) 233s E ImportError: 233s E 233s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 233s E 233s E Importing the numpy C-extensions failed. This error can happen for 233s E many reasons, often due to issues with your setup or how NumPy was 233s E installed. 233s E 233s E We have compiled some common reasons and troubleshooting tips at: 233s E 233s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 233s E 233s E Please note and check the following: 233s E 233s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 233s E * The NumPy version is: "1.26.4" 233s E 233s E and make sure that they are the versions you expect. 233s E Please carefully study the documentation linked above for further help. 233s E 233s E Original error was: No module named 'numpy.core._multiarray_umath' 233s 233s The above exception was the direct cause of the following exception: 233s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 233s return _bootstrap._gcd_import(name[level:], package, level) 233s tests/test_ext.py:6: in 233s import numpy as np 233s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 233s raise ImportError(msg) from e 233s E ImportError: Error importing numpy: you should not try to import numpy from 233s E its source directory; please exit the numpy source tree, and relaunch 233s E your python interpreter from there. 233s !!!!!!!!!!!!!!!!!!!!!!!!!! stopping after 1 failures !!!!!!!!!!!!!!!!!!!!!!!!!!! 233s =============================== 1 error in 0.07s =============================== 233s autopkgtest [09:00:22]: test testsuite: -----------------------] 234s testsuite FAIL non-zero exit status 1 234s autopkgtest [09:00:23]: test testsuite: - - - - - - - - - - results - - - - - - - - - - 234s autopkgtest [09:00:23]: @@@@@@@@@@@@@@@@@@@@ summary 234s command1 PASS 234s command2 PASS 234s testsuite FAIL non-zero exit status 1 247s nova [W] Skipping flock in bos03-arm64 247s Creating nova instance adt-plucky-arm64-bitshuffle-20241113-084946-juju-7f2275-prod-proposed-migration-environment-15-b42ed28a-0e3e-4483-8b2d-6dbeec599940 from image adt/ubuntu-plucky-arm64-server-20241113.img (UUID 2d7760e6-2439-4200-89d6-5ed33e5c6330)... 247s nova [W] Skipping flock in bos03-arm64 247s Creating nova instance adt-plucky-arm64-bitshuffle-20241113-084946-juju-7f2275-prod-proposed-migration-environment-15-b42ed28a-0e3e-4483-8b2d-6dbeec599940 from image adt/ubuntu-plucky-arm64-server-20241113.img (UUID 2d7760e6-2439-4200-89d6-5ed33e5c6330)...