0s autopkgtest [08:46:32]: starting date and time: 2024-11-13 08:46:32+0000 1s autopkgtest [08:46:33]: git checkout: 0acbae0a WIP show VirtSubproc stderr in real-time 1s autopkgtest [08:46:33]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.2o3y3j2y/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade atropos --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-46.secgroup --name adt-plucky-arm64-atropos-20241113-084631-juju-7f2275-prod-proposed-migration-environment-2-a5813717-c951-4c3c-b5f0-3ae4e55b5582 --image adt/ubuntu-plucky-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 162s autopkgtest [08:49:14]: testbed dpkg architecture: arm64 162s autopkgtest [08:49:14]: testbed apt version: 2.9.8 162s autopkgtest [08:49:14]: @@@@@@@@@@@@@@@@@@@@ test bed setup 163s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 164s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [849 kB] 164s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB] 164s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB] 164s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 164s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 Packages [104 kB] 164s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted arm64 Packages [50.3 kB] 164s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe arm64 Packages [601 kB] 164s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse arm64 Packages [17.1 kB] 164s Fetched 1793 kB in 1s (2006 kB/s) 164s Reading package lists... 167s Reading package lists... 168s Building dependency tree... 168s Reading state information... 169s Calculating upgrade... 170s The following NEW packages will be installed: 170s python3.13-gdbm 170s The following packages will be upgraded: 170s libpython3-stdlib python3 python3-gdbm python3-minimal 170s 4 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 170s Need to get 101 kB of archives. 170s After this operation, 141 kB of additional disk space will be used. 170s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-minimal arm64 3.12.7-1 [27.4 kB] 170s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3 arm64 3.12.7-1 [24.0 kB] 170s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 libpython3-stdlib arm64 3.12.7-1 [10.0 kB] 170s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-gdbm arm64 3.13.0-2 [30.7 kB] 170s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-gdbm arm64 3.12.7-1 [8642 B] 171s Fetched 101 kB in 0s (284 kB/s) 171s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 171s Preparing to unpack .../python3-minimal_3.12.7-1_arm64.deb ... 171s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 171s Setting up python3-minimal (3.12.7-1) ... 172s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79924 files and directories currently installed.) 172s Preparing to unpack .../python3_3.12.7-1_arm64.deb ... 172s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 172s Preparing to unpack .../libpython3-stdlib_3.12.7-1_arm64.deb ... 172s Unpacking libpython3-stdlib:arm64 (3.12.7-1) over (3.12.6-0ubuntu1) ... 172s Selecting previously unselected package python3.13-gdbm. 172s Preparing to unpack .../python3.13-gdbm_3.13.0-2_arm64.deb ... 172s Unpacking python3.13-gdbm (3.13.0-2) ... 172s Preparing to unpack .../python3-gdbm_3.12.7-1_arm64.deb ... 172s Unpacking python3-gdbm:arm64 (3.12.7-1) over (3.12.6-1ubuntu1) ... 172s Setting up python3.13-gdbm (3.13.0-2) ... 172s Setting up libpython3-stdlib:arm64 (3.12.7-1) ... 172s Setting up python3 (3.12.7-1) ... 172s Setting up python3-gdbm:arm64 (3.12.7-1) ... 172s Processing triggers for man-db (2.12.1-3) ... 173s Reading package lists... 174s Building dependency tree... 174s Reading state information... 176s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 176s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 176s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 176s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 176s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 178s Reading package lists... 178s Reading package lists... 178s Building dependency tree... 178s Reading state information... 179s Calculating upgrade... 180s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 180s Reading package lists... 180s Building dependency tree... 180s Reading state information... 181s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 185s autopkgtest [08:49:37]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 14:19:41 UTC 2024 185s autopkgtest [08:49:37]: @@@@@@@@@@@@@@@@@@@@ apt-source atropos 187s Get:1 http://ftpmaster.internal/ubuntu plucky/universe atropos 1.1.32+dfsg-2 (dsc) [2234 B] 187s Get:2 http://ftpmaster.internal/ubuntu plucky/universe atropos 1.1.32+dfsg-2 (tar) [3117 kB] 187s Get:3 http://ftpmaster.internal/ubuntu plucky/universe atropos 1.1.32+dfsg-2 (diff) [6800 B] 187s gpgv: Signature made Wed Jul 31 09:03:58 2024 UTC 187s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 187s gpgv: Can't check signature: No public key 187s dpkg-source: warning: cannot verify inline signature for ./atropos_1.1.32+dfsg-2.dsc: no acceptable signature found 187s autopkgtest [08:49:39]: testing package atropos version 1.1.32+dfsg-2 188s autopkgtest [08:49:40]: build not needed 190s autopkgtest [08:49:42]: test run-unit-test: preparing testbed 192s Reading package lists... 192s Building dependency tree... 192s Reading state information... 193s Starting pkgProblemResolver with broken count: 0 193s Starting 2 pkgProblemResolver with broken count: 0 193s Done 195s The following additional packages will be installed: 195s atropos libdeflate0 libhts3t64 libhtscodecs2 libpython3.13-minimal 195s libpython3.13-stdlib python3-all python3-iniconfig python3-packaging 195s python3-pluggy python3-pysam python3-pytest python3.13 python3.13-minimal 195s Suggested packages: 195s python3.13-venv python3.13-doc binfmt-support 195s The following NEW packages will be installed: 195s atropos autopkgtest-satdep libdeflate0 libhts3t64 libhtscodecs2 195s libpython3.13-minimal libpython3.13-stdlib python3-all python3-iniconfig 195s python3-packaging python3-pluggy python3-pysam python3-pytest python3.13 195s python3.13-minimal 195s 0 upgraded, 15 newly installed, 0 to remove and 0 not upgraded. 195s Need to get 10.3 MB/10.3 MB of archives. 195s After this operation, 63.0 MB of additional disk space will be used. 195s Get:1 /tmp/autopkgtest.yJfm0I/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [716 B] 195s Get:2 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-minimal arm64 3.13.0-2 [877 kB] 196s Get:3 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13-minimal arm64 3.13.0-2 [2100 kB] 196s Get:4 http://ftpmaster.internal/ubuntu plucky/main arm64 libdeflate0 arm64 1.22-1 [46.2 kB] 196s Get:5 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhtscodecs2 arm64 1.6.1-1 [82.5 kB] 196s Get:6 http://ftpmaster.internal/ubuntu plucky/universe arm64 libhts3t64 arm64 1.20+ds-1 [431 kB] 197s Get:7 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pysam arm64 0.22.1+ds-2 [3412 kB] 197s Get:8 http://ftpmaster.internal/ubuntu plucky/universe arm64 atropos arm64 1.1.32+dfsg-2 [217 kB] 197s Get:9 http://ftpmaster.internal/ubuntu plucky/main arm64 libpython3.13-stdlib arm64 3.13.0-2 [2073 kB] 198s Get:10 http://ftpmaster.internal/ubuntu plucky/main arm64 python3.13 arm64 3.13.0-2 [719 kB] 198s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/main arm64 python3-all arm64 3.12.7-1 [890 B] 198s Get:12 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-iniconfig all 1.1.1-2 [6024 B] 198s Get:13 http://ftpmaster.internal/ubuntu plucky/main arm64 python3-packaging all 24.1-1 [41.4 kB] 198s Get:14 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pluggy all 1.5.0-1 [21.0 kB] 198s Get:15 http://ftpmaster.internal/ubuntu plucky/universe arm64 python3-pytest all 8.3.3-1 [251 kB] 198s Fetched 10.3 MB in 3s (3357 kB/s) 198s Selecting previously unselected package libpython3.13-minimal:arm64. 198s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79931 files and directories currently installed.) 198s Preparing to unpack .../00-libpython3.13-minimal_3.13.0-2_arm64.deb ... 198s Unpacking libpython3.13-minimal:arm64 (3.13.0-2) ... 198s Selecting previously unselected package python3.13-minimal. 198s Preparing to unpack .../01-python3.13-minimal_3.13.0-2_arm64.deb ... 198s Unpacking python3.13-minimal (3.13.0-2) ... 198s Selecting previously unselected package libdeflate0:arm64. 199s Preparing to unpack .../02-libdeflate0_1.22-1_arm64.deb ... 199s Unpacking libdeflate0:arm64 (1.22-1) ... 199s Selecting previously unselected package libhtscodecs2:arm64. 199s Preparing to unpack .../03-libhtscodecs2_1.6.1-1_arm64.deb ... 199s Unpacking libhtscodecs2:arm64 (1.6.1-1) ... 199s Selecting previously unselected package libhts3t64:arm64. 199s Preparing to unpack .../04-libhts3t64_1.20+ds-1_arm64.deb ... 199s Unpacking libhts3t64:arm64 (1.20+ds-1) ... 199s Selecting previously unselected package python3-pysam. 199s Preparing to unpack .../05-python3-pysam_0.22.1+ds-2_arm64.deb ... 199s Unpacking python3-pysam (0.22.1+ds-2) ... 199s Selecting previously unselected package atropos. 199s Preparing to unpack .../06-atropos_1.1.32+dfsg-2_arm64.deb ... 199s Unpacking atropos (1.1.32+dfsg-2) ... 199s Selecting previously unselected package libpython3.13-stdlib:arm64. 199s Preparing to unpack .../07-libpython3.13-stdlib_3.13.0-2_arm64.deb ... 199s Unpacking libpython3.13-stdlib:arm64 (3.13.0-2) ... 199s Selecting previously unselected package python3.13. 199s Preparing to unpack .../08-python3.13_3.13.0-2_arm64.deb ... 199s Unpacking python3.13 (3.13.0-2) ... 199s Selecting previously unselected package python3-all. 199s Preparing to unpack .../09-python3-all_3.12.7-1_arm64.deb ... 199s Unpacking python3-all (3.12.7-1) ... 199s Selecting previously unselected package python3-iniconfig. 199s Preparing to unpack .../10-python3-iniconfig_1.1.1-2_all.deb ... 199s Unpacking python3-iniconfig (1.1.1-2) ... 199s Selecting previously unselected package python3-packaging. 199s Preparing to unpack .../11-python3-packaging_24.1-1_all.deb ... 199s Unpacking python3-packaging (24.1-1) ... 199s Selecting previously unselected package python3-pluggy. 199s Preparing to unpack .../12-python3-pluggy_1.5.0-1_all.deb ... 199s Unpacking python3-pluggy (1.5.0-1) ... 199s Selecting previously unselected package python3-pytest. 199s Preparing to unpack .../13-python3-pytest_8.3.3-1_all.deb ... 199s Unpacking python3-pytest (8.3.3-1) ... 199s Selecting previously unselected package autopkgtest-satdep. 199s Preparing to unpack .../14-1-autopkgtest-satdep.deb ... 199s Unpacking autopkgtest-satdep (0) ... 199s Setting up libhtscodecs2:arm64 (1.6.1-1) ... 199s Setting up python3-iniconfig (1.1.1-2) ... 200s Setting up libdeflate0:arm64 (1.22-1) ... 200s Setting up libpython3.13-minimal:arm64 (3.13.0-2) ... 200s Setting up python3-packaging (24.1-1) ... 200s Setting up python3-pluggy (1.5.0-1) ... 200s Setting up libhts3t64:arm64 (1.20+ds-1) ... 200s Setting up python3.13-minimal (3.13.0-2) ... 201s Setting up libpython3.13-stdlib:arm64 (3.13.0-2) ... 201s Setting up python3-pysam (0.22.1+ds-2) ... 201s Setting up python3.13 (3.13.0-2) ... 202s Setting up python3-pytest (8.3.3-1) ... 203s Setting up atropos (1.1.32+dfsg-2) ... 204s Setting up python3-all (3.12.7-1) ... 204s Setting up autopkgtest-satdep (0) ... 204s Processing triggers for systemd (256.5-2ubuntu4) ... 204s Processing triggers for man-db (2.12.1-3) ... 204s Processing triggers for libc-bin (2.40-1ubuntu3) ... 208s (Reading database ... 81273 files and directories currently installed.) 208s Removing autopkgtest-satdep (0) ... 208s autopkgtest [08:50:00]: test run-unit-test: [----------------------- 209s ============================= test session starts ============================== 209s platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3.13 209s cachedir: .pytest_cache 209s rootdir: /tmp/autopkgtest.yJfm0I/autopkgtest_tmp 209s plugins: typeguard-4.4.1 210s collecting ... collected 137 items / 8 errors 210s 210s ==================================== ERRORS ==================================== 210s ___________________ ERROR collecting tests/test_adapters.py ____________________ 210s ImportError while importing test module '/tmp/autopkgtest.yJfm0I/autopkgtest_tmp/tests/test_adapters.py'. 210s Hint: make sure your test modules/packages have valid Python names. 210s Traceback: 210s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 210s return _bootstrap._gcd_import(name[level:], package, level) 210s tests/test_adapters.py:3: in 210s from atropos.adapters import ( 210s /usr/lib/python3/dist-packages/atropos/adapters/__init__.py:13: in 210s from atropos import align 210s /usr/lib/python3/dist-packages/atropos/align/__init__.py:6: in 210s from atropos.align._align import Aligner, MultiAligner, compare_prefixes, locate 210s E ModuleNotFoundError: No module named 'atropos.align._align' 210s _____________________ ERROR collecting tests/test_align.py _____________________ 210s ImportError while importing test module '/tmp/autopkgtest.yJfm0I/autopkgtest_tmp/tests/test_align.py'. 210s Hint: make sure your test modules/packages have valid Python names. 210s Traceback: 210s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 210s return _bootstrap._gcd_import(name[level:], package, level) 210s tests/test_align.py:4: in 210s from atropos.adapters import BACK 210s /usr/lib/python3/dist-packages/atropos/adapters/__init__.py:13: in 210s from atropos import align 210s /usr/lib/python3/dist-packages/atropos/align/__init__.py:6: in 210s from atropos.align._align import Aligner, MultiAligner, compare_prefixes, locate 210s E ModuleNotFoundError: No module named 'atropos.align._align' 210s ___________________ ERROR collecting tests/test_commands.py ____________________ 210s ImportError while importing test module '/tmp/autopkgtest.yJfm0I/autopkgtest_tmp/tests/test_commands.py'. 210s Hint: make sure your test modules/packages have valid Python names. 210s Traceback: 210s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 210s return _bootstrap._gcd_import(name[level:], package, level) 210s tests/test_commands.py:3: in 210s from atropos.commands.trim.multicore import OrderPreservingWriterResultHandler 210s /usr/lib/python3/dist-packages/atropos/commands/trim/__init__.py:8: in 210s from atropos.commands.base import ( 210s /usr/lib/python3/dist-packages/atropos/commands/base.py:8: in 210s from atropos.adapters import AdapterCache 210s /usr/lib/python3/dist-packages/atropos/adapters/__init__.py:13: in 210s from atropos import align 210s /usr/lib/python3/dist-packages/atropos/align/__init__.py:6: in 210s from atropos.align._align import Aligner, MultiAligner, compare_prefixes, locate 210s E ModuleNotFoundError: No module named 'atropos.align._align' 210s ____________________ ERROR collecting tests/test_filters.py ____________________ 210s ImportError while importing test module '/tmp/autopkgtest.yJfm0I/autopkgtest_tmp/tests/test_filters.py'. 210s Hint: make sure your test modules/packages have valid Python names. 210s Traceback: 210s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 210s return _bootstrap._gcd_import(name[level:], package, level) 210s tests/test_filters.py:5: in 210s from atropos.commands.trim.filters import ( 210s /usr/lib/python3/dist-packages/atropos/commands/trim/__init__.py:8: in 210s from atropos.commands.base import ( 210s /usr/lib/python3/dist-packages/atropos/commands/base.py:8: in 210s from atropos.adapters import AdapterCache 210s /usr/lib/python3/dist-packages/atropos/adapters/__init__.py:13: in 210s from atropos import align 210s /usr/lib/python3/dist-packages/atropos/align/__init__.py:6: in 210s from atropos.align._align import Aligner, MultiAligner, compare_prefixes, locate 210s E ModuleNotFoundError: No module named 'atropos.align._align' 210s ___________________ ERROR collecting tests/test_modifiers.py ___________________ 210s ImportError while importing test module '/tmp/autopkgtest.yJfm0I/autopkgtest_tmp/tests/test_modifiers.py'. 210s Hint: make sure your test modules/packages have valid Python names. 210s Traceback: 210s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 210s return _bootstrap._gcd_import(name[level:], package, level) 210s tests/test_modifiers.py:2: in 210s from atropos.adapters import * 210s /usr/lib/python3/dist-packages/atropos/adapters/__init__.py:13: in 210s from atropos import align 210s /usr/lib/python3/dist-packages/atropos/align/__init__.py:6: in 210s from atropos.align._align import Aligner, MultiAligner, compare_prefixes, locate 210s E ModuleNotFoundError: No module named 'atropos.align._align' 210s ___________________ ERROR collecting tests/test_qualtrim.py ____________________ 210s ImportError while importing test module '/tmp/autopkgtest.yJfm0I/autopkgtest_tmp/tests/test_qualtrim.py'. 210s Hint: make sure your test modules/packages have valid Python names. 210s Traceback: 210s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 210s return _bootstrap._gcd_import(name[level:], package, level) 210s tests/test_qualtrim.py:2: in 210s from atropos.commands.trim.qualtrim import nextseq_trim_index 210s /usr/lib/python3/dist-packages/atropos/commands/trim/__init__.py:8: in 210s from atropos.commands.base import ( 210s /usr/lib/python3/dist-packages/atropos/commands/base.py:8: in 210s from atropos.adapters import AdapterCache 210s /usr/lib/python3/dist-packages/atropos/adapters/__init__.py:13: in 210s from atropos import align 210s /usr/lib/python3/dist-packages/atropos/align/__init__.py:6: in 210s from atropos.align._align import Aligner, MultiAligner, compare_prefixes, locate 210s E ModuleNotFoundError: No module named 'atropos.align._align' 210s _____________________ ERROR collecting tests/test_seqio.py _____________________ 210s tests/test_seqio.py:10: in 210s from atropos.io.seqio import ( 210s /usr/lib/python3/dist-packages/atropos/io/seqio.py:108: in 210s class ColorspaceSequence(Sequence): 210s E NameError: name 'Sequence' is not defined 210s _____________________ ERROR collecting tests/test_trim.py ______________________ 210s ImportError while importing test module '/tmp/autopkgtest.yJfm0I/autopkgtest_tmp/tests/test_trim.py'. 210s Hint: make sure your test modules/packages have valid Python names. 210s Traceback: 210s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 210s return _bootstrap._gcd_import(name[level:], package, level) 210s tests/test_trim.py:2: in 210s from atropos.adapters import Adapter, ColorspaceAdapter, PREFIX, BACK 210s /usr/lib/python3/dist-packages/atropos/adapters/__init__.py:13: in 210s from atropos import align 210s /usr/lib/python3/dist-packages/atropos/align/__init__.py:6: in 210s from atropos.align._align import Aligner, MultiAligner, compare_prefixes, locate 210s E ModuleNotFoundError: No module named 'atropos.align._align' 210s =============================== warnings summary =============================== 210s tests/test_paired.py:638 210s /tmp/autopkgtest.yJfm0I/autopkgtest_tmp/tests/test_paired.py:638: PytestUnknownMarkWarning: Unknown pytest.mark.timeout - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html 210s @pytest.mark.timeout(10) 210s 210s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 210s =========================== short test summary info ============================ 210s ERROR tests/test_adapters.py 210s ERROR tests/test_align.py 210s ERROR tests/test_commands.py 210s ERROR tests/test_filters.py 210s ERROR tests/test_modifiers.py 210s ERROR tests/test_qualtrim.py 210s ERROR tests/test_seqio.py - NameError: name 'Sequence' is not defined 210s ERROR tests/test_trim.py 210s !!!!!!!!!!!!!!!!!!! Interrupted: 8 errors during collection !!!!!!!!!!!!!!!!!!!! 210s ========================= 1 warning, 8 errors in 1.33s ========================= 211s autopkgtest [08:50:03]: test run-unit-test: -----------------------] 212s run-unit-test FAIL non-zero exit status 2 212s autopkgtest [08:50:04]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 212s autopkgtest [08:50:04]: @@@@@@@@@@@@@@@@@@@@ summary 212s run-unit-test FAIL non-zero exit status 2 243s virt: nova [W] Skipping flock in bos03-arm64 243s virt: Creating nova instance adt-plucky-arm64-atropos-20241113-084631-juju-7f2275-prod-proposed-migration-environment-2-a5813717-c951-4c3c-b5f0-3ae4e55b5582 from image adt/ubuntu-plucky-arm64-server-20241113.img (UUID 2d7760e6-2439-4200-89d6-5ed33e5c6330)...