0s autopkgtest [12:05:45]: starting date and time: 2024-11-15 12:05:45+0000 0s autopkgtest [12:05:45]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [12:05:45]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.07weefqd/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:numpy --apt-upgrade scikit-fmm --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=numpy/1:1.26.4+ds-11ubuntu1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-12.secgroup --name adt-plucky-amd64-scikit-fmm-20241115-120545-juju-7f2275-prod-proposed-migration-environment-20-b03fcc2e-b55e-46b6-b1ea-81111ed1f9c9 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 645s autopkgtest [12:16:30]: testbed dpkg architecture: amd64 645s autopkgtest [12:16:30]: testbed apt version: 2.9.8 645s autopkgtest [12:16:30]: @@@@@@@@@@@@@@@@@@@@ test bed setup 646s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 646s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [94.5 kB] 646s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.5 kB] 646s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [1052 kB] 647s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 647s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [109 kB] 647s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [176 kB] 647s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [32.6 kB] 647s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [295 kB] 647s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [831 kB] 647s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [9416 B] 647s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [740 B] 647s Fetched 2696 kB in 1s (3199 kB/s) 647s Reading package lists... 649s Reading package lists... 649s Building dependency tree... 649s Reading state information... 650s Calculating upgrade... 650s The following packages will be upgraded: 650s firmware-sof-signed grub-common grub-pc grub-pc-bin grub2-common libcap-ng0 650s libexpat1 lxd-installer man-db pastebinit python3-markupsafe python3-systemd 650s xfsprogs 650s 13 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 650s Need to get 13.6 MB of archives. 650s After this operation, 493 kB of additional disk space will be used. 650s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 firmware-sof-signed all 2024.06-1ubuntu2 [7083 kB] 651s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libcap-ng0 amd64 0.8.5-3build1 [15.6 kB] 651s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libexpat1 amd64 2.6.4-1 [94.9 kB] 651s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 man-db amd64 2.13.0-1 [1352 kB] 651s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 grub2-common amd64 2.12-5ubuntu7 [672 kB] 651s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 grub-pc amd64 2.12-5ubuntu7 [137 kB] 651s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 grub-pc-bin amd64 2.12-5ubuntu7 [1127 kB] 651s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 grub-common amd64 2.12-5ubuntu7 [2110 kB] 651s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 lxd-installer all 9 [5084 B] 651s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 pastebinit all 1.7.1-1 [14.9 kB] 651s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-markupsafe amd64 2.1.5-1build3 [13.0 kB] 651s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-systemd amd64 235-1build5 [45.7 kB] 651s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 xfsprogs amd64 6.8.0-2.2ubuntu2 [926 kB] 651s Preconfiguring packages ... 651s Fetched 13.6 MB in 1s (13.0 MB/s) 651s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75542 files and directories currently installed.) 651s Preparing to unpack .../firmware-sof-signed_2024.06-1ubuntu2_all.deb ... 651s Unpacking firmware-sof-signed (2024.06-1ubuntu2) over (2024.06-1ubuntu1) ... 652s Preparing to unpack .../libcap-ng0_0.8.5-3build1_amd64.deb ... 652s Unpacking libcap-ng0:amd64 (0.8.5-3build1) over (0.8.5-1) ... 652s Setting up libcap-ng0:amd64 (0.8.5-3build1) ... 652s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75568 files and directories currently installed.) 652s Preparing to unpack .../00-libexpat1_2.6.4-1_amd64.deb ... 652s Unpacking libexpat1:amd64 (2.6.4-1) over (2.6.2-2) ... 652s Preparing to unpack .../01-man-db_2.13.0-1_amd64.deb ... 652s Unpacking man-db (2.13.0-1) over (2.12.1-3) ... 652s Preparing to unpack .../02-grub2-common_2.12-5ubuntu7_amd64.deb ... 652s Unpacking grub2-common (2.12-5ubuntu7) over (2.12-5ubuntu5.1) ... 652s Preparing to unpack .../03-grub-pc_2.12-5ubuntu7_amd64.deb ... 652s Unpacking grub-pc (2.12-5ubuntu7) over (2.12-5ubuntu5.1) ... 652s Preparing to unpack .../04-grub-pc-bin_2.12-5ubuntu7_amd64.deb ... 652s Unpacking grub-pc-bin (2.12-5ubuntu7) over (2.12-5ubuntu5.1) ... 652s Preparing to unpack .../05-grub-common_2.12-5ubuntu7_amd64.deb ... 652s Unpacking grub-common (2.12-5ubuntu7) over (2.12-5ubuntu5.1) ... 652s Preparing to unpack .../06-lxd-installer_9_all.deb ... 652s Unpacking lxd-installer (9) over (8) ... 652s Preparing to unpack .../07-pastebinit_1.7.1-1_all.deb ... 652s Unpacking pastebinit (1.7.1-1) over (1.7.0-1) ... 652s Preparing to unpack .../08-python3-markupsafe_2.1.5-1build3_amd64.deb ... 652s Unpacking python3-markupsafe (2.1.5-1build3) over (2.1.5-1build2) ... 652s Preparing to unpack .../09-python3-systemd_235-1build5_amd64.deb ... 652s Unpacking python3-systemd (235-1build5) over (235-1build4) ... 652s Preparing to unpack .../10-xfsprogs_6.8.0-2.2ubuntu2_amd64.deb ... 652s Unpacking xfsprogs (6.8.0-2.2ubuntu2) over (6.8.0-2.2ubuntu1) ... 652s Setting up libexpat1:amd64 (2.6.4-1) ... 652s Setting up firmware-sof-signed (2024.06-1ubuntu2) ... 652s Setting up pastebinit (1.7.1-1) ... 652s Setting up man-db (2.13.0-1) ... 653s Updating database of manual pages ... 654s man-db.service is a disabled or a static unit not running, not starting it. 654s Setting up python3-markupsafe (2.1.5-1build3) ... 654s Setting up grub-common (2.12-5ubuntu7) ... 654s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults 655s Setting up xfsprogs (6.8.0-2.2ubuntu2) ... 655s update-initramfs: deferring update (trigger activated) 655s Setting up lxd-installer (9) ... 656s Setting up python3-systemd (235-1build5) ... 656s Setting up grub2-common (2.12-5ubuntu7) ... 656s Setting up grub-pc-bin (2.12-5ubuntu7) ... 656s Setting up grub-pc (2.12-5ubuntu7) ... 656s Installing for i386-pc platform. 656s Installation finished. No error reported. 656s Sourcing file `/etc/default/grub' 656s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 656s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 656s Generating grub configuration file ... 657s Found linux image: /boot/vmlinuz-6.11.0-8-generic 657s Found initrd image: /boot/initrd.img-6.11.0-8-generic 657s Warning: os-prober will not be executed to detect other bootable partitions. 657s Systems on them will not be added to the GRUB boot configuration. 657s Check GRUB_DISABLE_OS_PROBER documentation entry. 657s Adding boot menu entry for UEFI Firmware Settings ... 657s done 657s Processing triggers for libc-bin (2.40-1ubuntu3) ... 657s Processing triggers for install-info (7.1.1-1) ... 657s Processing triggers for initramfs-tools (0.142ubuntu34) ... 657s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic 657s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 664s Reading package lists... 665s Building dependency tree... 665s Reading state information... 665s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 665s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 665s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 665s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 665s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 666s Reading package lists... 666s Reading package lists... 666s Building dependency tree... 666s Reading state information... 667s Calculating upgrade... 667s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 667s Reading package lists... 667s Building dependency tree... 667s Reading state information... 667s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 667s autopkgtest [12:16:52]: rebooting testbed after setup commands that affected boot 684s autopkgtest [12:17:09]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 13:41:20 UTC 2024 687s autopkgtest [12:17:12]: @@@@@@@@@@@@@@@@@@@@ apt-source scikit-fmm 689s Get:1 http://ftpmaster.internal/ubuntu plucky/universe scikit-fmm 2024.05.29-1 (dsc) [2068 B] 689s Get:2 http://ftpmaster.internal/ubuntu plucky/universe scikit-fmm 2024.05.29-1 (tar) [461 kB] 689s Get:3 http://ftpmaster.internal/ubuntu plucky/universe scikit-fmm 2024.05.29-1 (diff) [4072 B] 689s gpgv: Signature made Sat Jul 6 05:11:21 2024 UTC 689s gpgv: using RSA key 1E0BAAD85C2232A1B3CE92EBB7047105830B9FA1 689s gpgv: Can't check signature: No public key 689s dpkg-source: warning: cannot verify inline signature for ./scikit-fmm_2024.05.29-1.dsc: no acceptable signature found 689s autopkgtest [12:17:14]: testing package scikit-fmm version 2024.05.29-1 689s autopkgtest [12:17:14]: build not needed 689s autopkgtest [12:17:14]: test command1: preparing testbed 692s Reading package lists... 692s Building dependency tree... 692s Reading state information... 693s Starting pkgProblemResolver with broken count: 0 693s Starting 2 pkgProblemResolver with broken count: 0 693s Done 693s The following additional packages will be installed: 693s libblas3 libgfortran5 liblapack3 python3-all python3-numpy 693s python3-scikit-fmm 693s Suggested packages: 693s gcc gfortran python-numpy-doc python3-dev python3-pytest 693s The following NEW packages will be installed: 693s autopkgtest-satdep libblas3 libgfortran5 liblapack3 python3-all 693s python3-numpy python3-scikit-fmm 693s 0 upgraded, 7 newly installed, 0 to remove and 0 not upgraded. 693s Need to get 9204 kB/9205 kB of archives. 693s After this operation, 50.6 MB of additional disk space will be used. 693s Get:1 /tmp/autopkgtest.Yq6yZS/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [716 B] 693s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-3build2 [247 kB] 693s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-8ubuntu1 [909 kB] 694s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-3build2 [2668 kB] 694s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-all amd64 3.12.6-0ubuntu1 [886 B] 694s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-numpy amd64 1:1.26.4+ds-11ubuntu1 [5319 kB] 694s Get:7 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-scikit-fmm amd64 2024.05.29-1 [60.2 kB] 694s Fetched 9204 kB in 1s (10.5 MB/s) 694s Selecting previously unselected package libblas3:amd64. 694s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75576 files and directories currently installed.) 694s Preparing to unpack .../0-libblas3_3.12.0-3build2_amd64.deb ... 694s Unpacking libblas3:amd64 (3.12.0-3build2) ... 694s Selecting previously unselected package libgfortran5:amd64. 694s Preparing to unpack .../1-libgfortran5_14.2.0-8ubuntu1_amd64.deb ... 694s Unpacking libgfortran5:amd64 (14.2.0-8ubuntu1) ... 694s Selecting previously unselected package liblapack3:amd64. 694s Preparing to unpack .../2-liblapack3_3.12.0-3build2_amd64.deb ... 694s Unpacking liblapack3:amd64 (3.12.0-3build2) ... 694s Selecting previously unselected package python3-all. 694s Preparing to unpack .../3-python3-all_3.12.6-0ubuntu1_amd64.deb ... 694s Unpacking python3-all (3.12.6-0ubuntu1) ... 694s Selecting previously unselected package python3-numpy. 694s Preparing to unpack .../4-python3-numpy_1%3a1.26.4+ds-11ubuntu1_amd64.deb ... 694s Unpacking python3-numpy (1:1.26.4+ds-11ubuntu1) ... 695s Selecting previously unselected package python3-scikit-fmm. 695s Preparing to unpack .../5-python3-scikit-fmm_2024.05.29-1_amd64.deb ... 695s Unpacking python3-scikit-fmm (2024.05.29-1) ... 695s Selecting previously unselected package autopkgtest-satdep. 695s Preparing to unpack .../6-1-autopkgtest-satdep.deb ... 695s Unpacking autopkgtest-satdep (0) ... 695s Setting up python3-all (3.12.6-0ubuntu1) ... 695s Setting up libblas3:amd64 (3.12.0-3build2) ... 695s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 695s Setting up libgfortran5:amd64 (14.2.0-8ubuntu1) ... 695s Setting up liblapack3:amd64 (3.12.0-3build2) ... 695s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 695s Setting up python3-numpy (1:1.26.4+ds-11ubuntu1) ... 696s Setting up python3-scikit-fmm (2024.05.29-1) ... 696s Setting up autopkgtest-satdep (0) ... 696s Processing triggers for man-db (2.13.0-1) ... 697s Processing triggers for libc-bin (2.40-1ubuntu3) ... 700s (Reading database ... 76512 files and directories currently installed.) 700s Removing autopkgtest-satdep (0) ... 700s autopkgtest [12:17:25]: test command1: set -e ; for py in $(py3versions -s 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import skfmm, sys; sys.exit(skfmm.test())" ; done 700s autopkgtest [12:17:25]: test command1: [----------------------- 701s Testing with python3.12: 701s Summary: 374 tests run 0 failures 702s autopkgtest [12:17:27]: test command1: -----------------------] 702s autopkgtest [12:17:27]: test command1: - - - - - - - - - - results - - - - - - - - - - 702s command1 PASS 702s autopkgtest [12:17:27]: @@@@@@@@@@@@@@@@@@@@ summary 702s command1 PASS 714s nova [W] Skipping flock for amd64 714s Creating nova instance adt-plucky-amd64-scikit-fmm-20241115-120545-juju-7f2275-prod-proposed-migration-environment-20-b03fcc2e-b55e-46b6-b1ea-81111ed1f9c9 from image adt/ubuntu-plucky-amd64-server-20241114.img (UUID 79d80331-8736-463c-82c6-8c9e13c0a4ca)... 714s nova [W] nova quota exceeded (attempt #0) 714s nova [W] nova quota exceeded (attempt #1)