0s autopkgtest [22:32:09]: starting date and time: 2025-03-15 22:32:09+0000 0s autopkgtest [22:32:09]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [22:32:09]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.a36lwyrg/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-cran-sparsesvd --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-22.secgroup --name adt-plucky-amd64-r-cran-sparsesvd-20250315-223209-juju-7f2275-prod-proposed-migration-environment-2-24abc56d-41b1-420b-b1b3-194210082990 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 49s autopkgtest [22:32:58]: testbed dpkg architecture: amd64 49s autopkgtest [22:32:58]: testbed apt version: 2.9.31ubuntu1 49s autopkgtest [22:32:58]: @@@@@@@@@@@@@@@@@@@@ test bed setup 49s autopkgtest [22:32:58]: testbed release detected to be: None 50s autopkgtest [22:32:59]: updating testbed package index (apt update) 51s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 51s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 51s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 51s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 51s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [14.5 kB] 51s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [369 kB] 52s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [44.1 kB] 52s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [67.4 kB] 52s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [85.7 kB] 52s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 c-n-f Metadata [1852 B] 52s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 c-n-f Metadata [116 B] 52s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [342 kB] 52s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [174 kB] 52s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 c-n-f Metadata [15.3 kB] 52s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [8544 B] 52s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [16.1 kB] 52s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 c-n-f Metadata [628 B] 52s Fetched 1265 kB in 2s (760 kB/s) 53s Reading package lists... 54s Reading package lists... 54s Building dependency tree... 54s Reading state information... 54s Calculating upgrade... 55s Calculating upgrade... 55s The following package was automatically installed and is no longer required: 55s libnl-genl-3-200 55s Use 'sudo apt autoremove' to remove it. 55s The following NEW packages will be installed: 55s bpftool libdebuginfod-common libdebuginfod1t64 linux-headers-6.14.0-10 55s linux-headers-6.14.0-10-generic linux-image-6.14.0-10-generic 55s linux-modules-6.14.0-10-generic linux-modules-extra-6.14.0-10-generic 55s linux-perf linux-tools-6.14.0-10 linux-tools-6.14.0-10-generic pnp.ids 55s The following packages will be upgraded: 55s apparmor apt apt-utils binutils binutils-common binutils-x86-64-linux-gnu 55s cloud-init cloud-init-base curl dosfstools exfatprogs fwupd gcc-15-base 55s gir1.2-girepository-2.0 gir1.2-glib-2.0 htop hwdata initramfs-tools 55s initramfs-tools-bin initramfs-tools-core libapparmor1 libapt-pkg7.0 55s libassuan9 libatomic1 libaudit-common libaudit1 libbinutils libbrotli1 55s libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libctf-nobfd0 libctf0 55s libcurl3t64-gnutls libcurl4t64 libestr0 libftdi1-2 libfwupd3 libgcc-s1 55s libgirepository-1.0-1 libglib2.0-0t64 libglib2.0-data libgpgme11t64 55s libgprofng0 libjemalloc2 liblz4-1 liblzma5 libmm-glib0 libncurses6 55s libncursesw6 libnewt0.52 libnl-3-200 libnl-genl-3-200 libnl-route-3-200 55s libnss-systemd libpam-systemd libparted2t64 libpci3 libpython3-stdlib 55s libpython3.13 libpython3.13-minimal libpython3.13-stdlib libseccomp2 55s libselinux1 libsemanage-common libsemanage2 libsframe1 libsqlite3-0 55s libstdc++6 libsystemd-shared libsystemd0 libtinfo6 libudev1 libxml2 55s linux-firmware linux-generic linux-headers-generic linux-headers-virtual 55s linux-image-generic linux-image-virtual linux-libc-dev linux-tools-common 55s linux-virtual locales media-types ncurses-base ncurses-bin ncurses-term 55s parted pci.ids pciutils pinentry-curses python-apt-common python3 55s python3-apt python3-bcrypt python3-cffi-backend python3-dbus python3-gi 55s python3-jinja2 python3-lazr.uri python3-markupsafe python3-minimal 55s python3-newt python3-rpds-py python3-systemd python3-yaml python3.13 55s python3.13-gdbm python3.13-minimal rsync rsyslog strace systemd 55s systemd-cryptsetup systemd-resolved systemd-sysv systemd-timesyncd 55s ubuntu-kernel-accessories ubuntu-minimal ubuntu-standard udev whiptail 55s xz-utils 55s 126 upgraded, 12 newly installed, 0 to remove and 0 not upgraded. 55s Need to get 829 MB of archives. 55s After this operation, 325 MB of additional disk space will be used. 55s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-bin amd64 6.5+20250216-2 [194 kB] 55s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-dev-bin amd64 2.41-1ubuntu1 [24.7 kB] 55s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6-dev amd64 2.41-1ubuntu1 [2182 kB] 56s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 locales all 2.41-1ubuntu1 [4246 kB] 57s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6 amd64 2.41-1ubuntu1 [3327 kB] 57s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-bin amd64 2.41-1ubuntu1 [701 kB] 57s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-libc-dev amd64 6.14.0-10.10 [1723 kB] 57s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libatomic1 amd64 15-20250222-0ubuntu1 [10.4 kB] 57s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-15-base amd64 15-20250222-0ubuntu1 [53.4 kB] 57s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-s1 amd64 15-20250222-0ubuntu1 [77.8 kB] 57s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++6 amd64 15-20250222-0ubuntu1 [798 kB] 57s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-base all 6.5+20250216-2 [25.9 kB] 57s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-term all 6.5+20250216-2 [276 kB] 57s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 liblz4-1 amd64 1.10.0-4 [66.4 kB] 57s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma5 amd64 5.6.4-1 [157 kB] 57s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd0 amd64 257.3-1ubuntu3 [595 kB] 57s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libnss-systemd amd64 257.3-1ubuntu3 [199 kB] 57s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-sysv amd64 257.3-1ubuntu3 [11.9 kB] 57s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-resolved amd64 257.3-1ubuntu3 [345 kB] 57s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-systemd amd64 257.3-1ubuntu3 [302 kB] 57s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd-shared amd64 257.3-1ubuntu3 [2371 kB] 58s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd amd64 257.3-1ubuntu3 [3052 kB] 58s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-timesyncd amd64 257.3-1ubuntu3 [42.1 kB] 58s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-cryptsetup amd64 257.3-1ubuntu3 [124 kB] 58s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 udev amd64 257.3-1ubuntu3 [1404 kB] 58s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libudev1 amd64 257.3-1ubuntu3 [215 kB] 58s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit-common all 1:4.0.2-2ubuntu2 [6628 B] 58s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libcap-ng0 amd64 0.8.5-4build1 [15.6 kB] 58s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit1 amd64 1:4.0.2-2ubuntu2 [54.0 kB] 58s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libseccomp2 amd64 2.5.5-1ubuntu6 [53.5 kB] 58s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libselinux1 amd64 3.7-3ubuntu3 [87.3 kB] 58s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libapparmor1 amd64 4.1.0~beta5-0ubuntu8 [55.0 kB] 58s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libapt-pkg7.0 amd64 2.9.33 [1138 kB] 58s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 apt amd64 2.9.33 [1439 kB] 58s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 apt-utils amd64 2.9.33 [222 kB] 58s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-minimal amd64 3.13.2-2 [27.7 kB] 58s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 python3 amd64 3.13.2-2 [24.0 kB] 58s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13 amd64 3.13.2-2 [2341 kB] 58s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 media-types all 13.0.0 [29.9 kB] 58s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses6 amd64 6.5+20250216-2 [126 kB] 58s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libncursesw6 amd64 6.5+20250216-2 [165 kB] 58s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libtinfo6 amd64 6.5+20250216-2 [119 kB] 58s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libsqlite3-0 amd64 3.46.1-2 [715 kB] 58s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.2-2 [735 kB] 59s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.2-2 [2365 kB] 59s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.2-2 [883 kB] 59s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.2-2 [2066 kB] 59s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.4 kB] 59s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 rsync amd64 3.4.1+ds1-3 [482 kB] 59s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod-common all 0.192-4 [15.4 kB] 59s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage-common all 3.7-2.1build1 [7268 B] 59s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage2 amd64 3.7-2.1build1 [106 kB] 59s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libassuan9 amd64 3.0.2-2 [43.1 kB] 59s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-girepository-2.0 amd64 1.83.4-1 [25.3 kB] 59s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-glib-2.0 amd64 2.84.0-1 [184 kB] 59s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-0t64 amd64 2.84.0-1 [1669 kB] 59s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libgirepository-1.0-1 amd64 1.83.4-1 [89.5 kB] 59s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libestr0 amd64 0.1.11-2 [8340 B] 59s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-data all 2.84.0-1 [53.0 kB] 59s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-newt amd64 0.52.24-4ubuntu2 [21.1 kB] 59s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libnewt0.52 amd64 0.52.24-4ubuntu2 [55.7 kB] 59s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2ubuntu5 [772 kB] 59s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 python-apt-common all 2.9.9build1 [21.3 kB] 59s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-apt amd64 2.9.9build1 [172 kB] 59s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-cffi-backend amd64 1.17.1-2build2 [96.6 kB] 59s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dbus amd64 1.3.2-5build5 [102 kB] 59s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-4build1 [252 kB] 59s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-yaml amd64 6.0.2-1build2 [144 kB] 59s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 rsyslog amd64 8.2412.0-2ubuntu2 [555 kB] 59s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 whiptail amd64 0.52.24-4ubuntu2 [19.1 kB] 59s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-minimal amd64 1.549 [11.5 kB] 59s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 apparmor amd64 4.1.0~beta5-0ubuntu8 [701 kB] 59s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 dosfstools amd64 4.2-1.2 [95.0 kB] 59s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-genl-3-200 amd64 3.7.0-1 [12.2 kB] 59s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-route-3-200 amd64 3.7.0-1 [191 kB] 59s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-3-200 amd64 3.7.0-1 [64.9 kB] 59s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 parted amd64 3.6-5 [53.9 kB] 59s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libparted2t64 amd64 3.6-5 [158 kB] 59s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 pci.ids all 0.0~2025.03.09-1 [285 kB] 59s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 pciutils amd64 1:3.13.0-2 [110 kB] 59s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 libpci3 amd64 1:3.13.0-2 [39.8 kB] 60s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 strace amd64 6.13+ds-1ubuntu1 [622 kB] 60s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 xz-utils amd64 5.6.4-1 [278 kB] 60s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-standard amd64 1.549 [11.5 kB] 60s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libgprofng0 amd64 2.44-3ubuntu1 [886 kB] 60s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf0 amd64 2.44-3ubuntu1 [96.5 kB] 60s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf-nobfd0 amd64 2.44-3ubuntu1 [98.9 kB] 60s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-x86-64-linux-gnu amd64 2.44-3ubuntu1 [1108 kB] 60s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libbinutils amd64 2.44-3ubuntu1 [585 kB] 60s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils amd64 2.44-3ubuntu1 [208 kB] 60s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-common amd64 2.44-3ubuntu1 [215 kB] 60s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libsframe1 amd64 2.44-3ubuntu1 [14.8 kB] 60s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 hwdata all 0.393-3 [1562 B] 60s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 pnp.ids all 0.393-3 [29.5 kB] 60s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-common all 6.14.0-10.10 [295 kB] 60s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 bpftool amd64 7.6.0+6.14.0-10.10 [1147 kB] 60s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-markupsafe amd64 2.1.5-1build4 [13.4 kB] 60s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 60s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init-base all 25.1-0ubuntu3 [616 kB] 60s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libbrotli1 amd64 1.1.0-2build4 [365 kB] 60s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 curl amd64 8.12.1-3ubuntu1 [258 kB] 60s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4t64 amd64 8.12.1-3ubuntu1 [437 kB] 61s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 exfatprogs amd64 1.2.8-1 [76.3 kB] 61s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl3t64-gnutls amd64 8.12.1-3ubuntu1 [432 kB] 61s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 fwupd amd64 2.0.6-4 [5408 kB] 61s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libfwupd3 amd64 2.0.6-4 [136 kB] 61s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libmm-glib0 amd64 1.23.4-0ubuntu3 [251 kB] 61s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 htop amd64 3.4.0-2 [195 kB] 61s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-firmware amd64 20250310.git9e1370d3-0ubuntu1 [571 MB] 99s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools all 0.146ubuntu1 [7920 B] 99s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-core all 0.146ubuntu1 [51.9 kB] 99s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-bin amd64 0.146ubuntu1 [26.2 kB] 99s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod1t64 amd64 0.192-4 [21.0 kB] 99s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 libftdi1-2 amd64 1.5-8build1 [30.2 kB] 99s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libgpgme11t64 amd64 1.24.2-1ubuntu2 [155 kB] 99s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libjemalloc2 amd64 5.3.0-3 [277 kB] 99s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-6.14.0-10-generic amd64 6.14.0-10.10 [41.2 MB] 101s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-6.14.0-10-generic amd64 6.14.0-10.10 [15.3 MB] 102s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-extra-6.14.0-10-generic amd64 6.14.0-10.10 [120 MB] 108s Get:120 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-generic amd64 6.14.0-10.10 [1730 B] 108s Get:121 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-generic amd64 6.14.0-10.10 [11.1 kB] 108s Get:122 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-virtual amd64 6.14.0-10.10 [1722 B] 108s Get:123 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-virtual amd64 6.14.0-10.10 [11.1 kB] 108s Get:124 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-virtual amd64 6.14.0-10.10 [1642 B] 108s Get:125 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10 all 6.14.0-10.10 [14.2 MB] 108s Get:126 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10-generic amd64 6.14.0-10.10 [3915 kB] 108s Get:127 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-generic amd64 6.14.0-10.10 [11.0 kB] 108s Get:128 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-perf amd64 6.14.0-10.10 [4122 kB] 109s Get:129 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10 amd64 6.14.0-10.10 [1394 kB] 109s Get:130 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10-generic amd64 6.14.0-10.10 [830 B] 109s Get:131 http://ftpmaster.internal/ubuntu plucky/main amd64 pinentry-curses amd64 1.3.1-2ubuntu3 [42.3 kB] 109s Get:132 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lazr.uri all 1.0.6-6 [13.7 kB] 109s Get:133 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-rpds-py amd64 0.21.0-2ubuntu2 [278 kB] 109s Get:134 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-systemd amd64 235-1build6 [43.9 kB] 109s Get:135 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-gdbm amd64 3.13.2-2 [31.9 kB] 109s Get:136 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-kernel-accessories amd64 1.549 [11.2 kB] 109s Get:137 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init all 25.1-0ubuntu3 [2100 B] 109s Get:138 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-bcrypt amd64 4.2.0-2.1build1 [221 kB] 109s Preconfiguring packages ... 109s Fetched 829 MB in 54s (15.3 MB/s) 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109140 files and directories currently installed.) 110s Preparing to unpack .../ncurses-bin_6.5+20250216-2_amd64.deb ... 110s Unpacking ncurses-bin (6.5+20250216-2) over (6.5+20250216-1) ... 110s Setting up ncurses-bin (6.5+20250216-2) ... 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109140 files and directories currently installed.) 110s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu1_amd64.deb ... 110s Unpacking libc-dev-bin (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 110s Preparing to unpack .../libc6-dev_2.41-1ubuntu1_amd64.deb ... 110s Unpacking libc6-dev:amd64 (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 110s Preparing to unpack .../locales_2.41-1ubuntu1_all.deb ... 110s Unpacking locales (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 110s Preparing to unpack .../libc6_2.41-1ubuntu1_amd64.deb ... 111s Checking for services that may need to be restarted... 111s Checking init scripts... 111s Checking for services that may need to be restarted... 111s Checking init scripts... 111s Stopping some services possibly affected by the upgrade (will be restarted later): 111s cron: stopping...done. 111s 111s Unpacking libc6:amd64 (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 111s Setting up libc6:amd64 (2.41-1ubuntu1) ... 111s Checking for services that may need to be restarted... 111s Checking init scripts... 111s Restarting services possibly affected by the upgrade: 111s cron: restarting...done. 111s 111s Services restarted successfully. 111s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109141 files and directories currently installed.) 111s Preparing to unpack .../libc-bin_2.41-1ubuntu1_amd64.deb ... 111s Unpacking libc-bin (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 111s Setting up libc-bin (2.41-1ubuntu1) ... 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109141 files and directories currently installed.) 112s Preparing to unpack .../linux-libc-dev_6.14.0-10.10_amd64.deb ... 112s Unpacking linux-libc-dev:amd64 (6.14.0-10.10) over (6.12.0-16.16) ... 112s Preparing to unpack .../libatomic1_15-20250222-0ubuntu1_amd64.deb ... 112s Unpacking libatomic1:amd64 (15-20250222-0ubuntu1) over (15-20250213-1ubuntu1) ... 112s Preparing to unpack .../gcc-15-base_15-20250222-0ubuntu1_amd64.deb ... 112s Unpacking gcc-15-base:amd64 (15-20250222-0ubuntu1) over (15-20250213-1ubuntu1) ... 112s Setting up gcc-15-base:amd64 (15-20250222-0ubuntu1) ... 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 112s Preparing to unpack .../libgcc-s1_15-20250222-0ubuntu1_amd64.deb ... 112s Unpacking libgcc-s1:amd64 (15-20250222-0ubuntu1) over (15-20250213-1ubuntu1) ... 112s Setting up libgcc-s1:amd64 (15-20250222-0ubuntu1) ... 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 112s Preparing to unpack .../libstdc++6_15-20250222-0ubuntu1_amd64.deb ... 112s Unpacking libstdc++6:amd64 (15-20250222-0ubuntu1) over (15-20250213-1ubuntu1) ... 112s Setting up libstdc++6:amd64 (15-20250222-0ubuntu1) ... 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 112s Preparing to unpack .../ncurses-base_6.5+20250216-2_all.deb ... 112s Unpacking ncurses-base (6.5+20250216-2) over (6.5+20250216-1) ... 113s Setting up ncurses-base (6.5+20250216-2) ... 113s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 113s Preparing to unpack .../ncurses-term_6.5+20250216-2_all.deb ... 113s Unpacking ncurses-term (6.5+20250216-2) over (6.5+20250216-1) ... 113s Preparing to unpack .../liblz4-1_1.10.0-4_amd64.deb ... 113s Unpacking liblz4-1:amd64 (1.10.0-4) over (1.10.0-3) ... 113s Setting up liblz4-1:amd64 (1.10.0-4) ... 113s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 113s Preparing to unpack .../liblzma5_5.6.4-1_amd64.deb ... 113s Unpacking liblzma5:amd64 (5.6.4-1) over (5.6.3-1) ... 113s Setting up liblzma5:amd64 (5.6.4-1) ... 113s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 113s Preparing to unpack .../libsystemd0_257.3-1ubuntu3_amd64.deb ... 113s Unpacking libsystemd0:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 113s Setting up libsystemd0:amd64 (257.3-1ubuntu3) ... 113s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 113s Preparing to unpack .../libnss-systemd_257.3-1ubuntu3_amd64.deb ... 114s Unpacking libnss-systemd:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 114s Preparing to unpack .../systemd-sysv_257.3-1ubuntu3_amd64.deb ... 114s Unpacking systemd-sysv (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 114s Preparing to unpack .../systemd-resolved_257.3-1ubuntu3_amd64.deb ... 114s Unpacking systemd-resolved (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 114s Preparing to unpack .../libpam-systemd_257.3-1ubuntu3_amd64.deb ... 114s Unpacking libpam-systemd:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 114s Preparing to unpack .../libsystemd-shared_257.3-1ubuntu3_amd64.deb ... 114s Unpacking libsystemd-shared:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 114s Setting up libsystemd-shared:amd64 (257.3-1ubuntu3) ... 114s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 114s Preparing to unpack .../systemd_257.3-1ubuntu3_amd64.deb ... 114s Unpacking systemd (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 114s Preparing to unpack .../systemd-timesyncd_257.3-1ubuntu3_amd64.deb ... 114s Unpacking systemd-timesyncd (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 114s Preparing to unpack .../systemd-cryptsetup_257.3-1ubuntu3_amd64.deb ... 114s Unpacking systemd-cryptsetup (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 114s Preparing to unpack .../udev_257.3-1ubuntu3_amd64.deb ... 114s Unpacking udev (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 114s Preparing to unpack .../libudev1_257.3-1ubuntu3_amd64.deb ... 114s Unpacking libudev1:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 114s Setting up libudev1:amd64 (257.3-1ubuntu3) ... 115s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 115s Preparing to unpack .../libaudit-common_1%3a4.0.2-2ubuntu2_all.deb ... 115s Unpacking libaudit-common (1:4.0.2-2ubuntu2) over (1:4.0.2-2ubuntu1) ... 115s Setting up libaudit-common (1:4.0.2-2ubuntu2) ... 115s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 115s Preparing to unpack .../libcap-ng0_0.8.5-4build1_amd64.deb ... 115s Unpacking libcap-ng0:amd64 (0.8.5-4build1) over (0.8.5-4) ... 115s Setting up libcap-ng0:amd64 (0.8.5-4build1) ... 115s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 115s Preparing to unpack .../libaudit1_1%3a4.0.2-2ubuntu2_amd64.deb ... 115s Unpacking libaudit1:amd64 (1:4.0.2-2ubuntu2) over (1:4.0.2-2ubuntu1) ... 115s Setting up libaudit1:amd64 (1:4.0.2-2ubuntu2) ... 115s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 115s Preparing to unpack .../libseccomp2_2.5.5-1ubuntu6_amd64.deb ... 115s Unpacking libseccomp2:amd64 (2.5.5-1ubuntu6) over (2.5.5-1ubuntu5) ... 115s Setting up libseccomp2:amd64 (2.5.5-1ubuntu6) ... 115s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 115s Preparing to unpack .../libselinux1_3.7-3ubuntu3_amd64.deb ... 115s Unpacking libselinux1:amd64 (3.7-3ubuntu3) over (3.7-3ubuntu2) ... 115s Setting up libselinux1:amd64 (3.7-3ubuntu3) ... 115s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 115s Preparing to unpack .../libapparmor1_4.1.0~beta5-0ubuntu8_amd64.deb ... 115s Unpacking libapparmor1:amd64 (4.1.0~beta5-0ubuntu8) over (4.1.0~beta5-0ubuntu5) ... 115s Preparing to unpack .../libapt-pkg7.0_2.9.33_amd64.deb ... 115s Unpacking libapt-pkg7.0:amd64 (2.9.33) over (2.9.31ubuntu1) ... 115s Setting up libapt-pkg7.0:amd64 (2.9.33) ... 115s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 115s Preparing to unpack .../archives/apt_2.9.33_amd64.deb ... 115s Unpacking apt (2.9.33) over (2.9.31ubuntu1) ... 115s Setting up apt (2.9.33) ... 116s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 116s Preparing to unpack .../apt-utils_2.9.33_amd64.deb ... 116s Unpacking apt-utils (2.9.33) over (2.9.31ubuntu1) ... 116s Preparing to unpack .../python3-minimal_3.13.2-2_amd64.deb ... 116s Unpacking python3-minimal (3.13.2-2) over (3.13.2-1) ... 116s Setting up python3-minimal (3.13.2-2) ... 116s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 116s Preparing to unpack .../0-python3_3.13.2-2_amd64.deb ... 116s Unpacking python3 (3.13.2-2) over (3.13.2-1) ... 117s Preparing to unpack .../1-libpython3.13_3.13.2-2_amd64.deb ... 117s Unpacking libpython3.13:amd64 (3.13.2-2) over (3.13.2-1) ... 117s Preparing to unpack .../2-media-types_13.0.0_all.deb ... 117s Unpacking media-types (13.0.0) over (12.0.0) ... 117s Preparing to unpack .../3-libncurses6_6.5+20250216-2_amd64.deb ... 117s Unpacking libncurses6:amd64 (6.5+20250216-2) over (6.5+20250216-1) ... 117s Preparing to unpack .../4-libncursesw6_6.5+20250216-2_amd64.deb ... 117s Unpacking libncursesw6:amd64 (6.5+20250216-2) over (6.5+20250216-1) ... 117s Preparing to unpack .../5-libtinfo6_6.5+20250216-2_amd64.deb ... 117s Unpacking libtinfo6:amd64 (6.5+20250216-2) over (6.5+20250216-1) ... 117s Setting up libtinfo6:amd64 (6.5+20250216-2) ... 117s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 117s Preparing to unpack .../0-libsqlite3-0_3.46.1-2_amd64.deb ... 117s Unpacking libsqlite3-0:amd64 (3.46.1-2) over (3.46.1-1) ... 117s Preparing to unpack .../1-python3.13_3.13.2-2_amd64.deb ... 117s Unpacking python3.13 (3.13.2-2) over (3.13.2-1) ... 117s Preparing to unpack .../2-python3.13-minimal_3.13.2-2_amd64.deb ... 117s Unpacking python3.13-minimal (3.13.2-2) over (3.13.2-1) ... 117s Preparing to unpack .../3-libpython3.13-minimal_3.13.2-2_amd64.deb ... 117s Unpacking libpython3.13-minimal:amd64 (3.13.2-2) over (3.13.2-1) ... 117s Preparing to unpack .../4-libpython3.13-stdlib_3.13.2-2_amd64.deb ... 117s Unpacking libpython3.13-stdlib:amd64 (3.13.2-2) over (3.13.2-1) ... 117s Preparing to unpack .../5-libpython3-stdlib_3.13.2-2_amd64.deb ... 117s Unpacking libpython3-stdlib:amd64 (3.13.2-2) over (3.13.2-1) ... 117s Preparing to unpack .../6-rsync_3.4.1+ds1-3_amd64.deb ... 118s Unpacking rsync (3.4.1+ds1-3) over (3.4.1-0syncable1) ... 118s Selecting previously unselected package libdebuginfod-common. 118s Preparing to unpack .../7-libdebuginfod-common_0.192-4_all.deb ... 118s Unpacking libdebuginfod-common (0.192-4) ... 118s Preparing to unpack .../8-libsemanage-common_3.7-2.1build1_all.deb ... 118s Unpacking libsemanage-common (3.7-2.1build1) over (3.7-2.1) ... 118s Setting up libsemanage-common (3.7-2.1build1) ... 118s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109155 files and directories currently installed.) 118s Preparing to unpack .../libsemanage2_3.7-2.1build1_amd64.deb ... 118s Unpacking libsemanage2:amd64 (3.7-2.1build1) over (3.7-2.1) ... 118s Setting up libsemanage2:amd64 (3.7-2.1build1) ... 118s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109155 files and directories currently installed.) 118s Preparing to unpack .../00-gir1.2-girepository-2.0_1.83.4-1_amd64.deb ... 118s Unpacking gir1.2-girepository-2.0:amd64 (1.83.4-1) over (1.82.0-4) ... 118s Preparing to unpack .../01-gir1.2-glib-2.0_2.84.0-1_amd64.deb ... 118s Unpacking gir1.2-glib-2.0:amd64 (2.84.0-1) over (2.83.5-1) ... 118s Preparing to unpack .../02-libglib2.0-0t64_2.84.0-1_amd64.deb ... 118s Unpacking libglib2.0-0t64:amd64 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.../23-parted_3.6-5_amd64.deb ... 121s Unpacking parted (3.6-5) over (3.6-4build1) ... 121s Preparing to unpack .../24-libparted2t64_3.6-5_amd64.deb ... 121s Adding 'diversion of /lib/x86_64-linux-gnu/libparted.so.2 to /lib/x86_64-linux-gnu/libparted.so.2.usr-is-merged by libparted2t64' 121s Adding 'diversion of /lib/x86_64-linux-gnu/libparted.so.2.0.5 to /lib/x86_64-linux-gnu/libparted.so.2.0.5.usr-is-merged by libparted2t64' 121s Unpacking libparted2t64:amd64 (3.6-5) over (3.6-4build1) ... 121s Preparing to unpack .../25-pci.ids_0.0~2025.03.09-1_all.deb ... 121s Unpacking pci.ids (0.0~2025.03.09-1) over (0.0~2025.02.12-1) ... 121s Preparing to unpack .../26-pciutils_1%3a3.13.0-2_amd64.deb ... 121s Unpacking pciutils (1:3.13.0-2) over (1:3.13.0-1) ... 121s Preparing to unpack .../27-libpci3_1%3a3.13.0-2_amd64.deb ... 121s Unpacking libpci3:amd64 (1:3.13.0-2) over (1:3.13.0-1) ... 121s Preparing to unpack .../28-strace_6.13+ds-1ubuntu1_amd64.deb ... 121s Unpacking strace 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(2.44-3ubuntu1) over (2.44-2ubuntu1) ... 121s Preparing to unpack .../36-binutils_2.44-3ubuntu1_amd64.deb ... 121s Unpacking binutils (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 121s Preparing to unpack .../37-binutils-common_2.44-3ubuntu1_amd64.deb ... 121s Unpacking binutils-common:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 121s Preparing to unpack .../38-libsframe1_2.44-3ubuntu1_amd64.deb ... 121s Unpacking libsframe1:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 121s Preparing to unpack .../39-hwdata_0.393-3_all.deb ... 121s Unpacking hwdata (0.393-3) over (0.392-1) ... 121s Selecting previously unselected package pnp.ids. 121s Preparing to unpack .../40-pnp.ids_0.393-3_all.deb ... 121s Unpacking pnp.ids (0.393-3) ... 121s Preparing to unpack .../41-linux-tools-common_6.14.0-10.10_all.deb ... 121s Unpacking linux-tools-common (6.14.0-10.10) over (6.12.0-16.16) ... 121s Selecting previously unselected package bpftool. 121s Preparing to unpack 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.../49-exfatprogs_1.2.8-1_amd64.deb ... 122s Unpacking exfatprogs (1.2.8-1) over (1.2.7-3) ... 122s Preparing to unpack .../50-libcurl3t64-gnutls_8.12.1-3ubuntu1_amd64.deb ... 122s Unpacking libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) over (8.12.1-2ubuntu1) ... 122s Preparing to unpack .../51-fwupd_2.0.6-4_amd64.deb ... 123s Unpacking fwupd (2.0.6-4) over (2.0.6-3) ... 123s Preparing to unpack .../52-libfwupd3_2.0.6-4_amd64.deb ... 123s Unpacking libfwupd3:amd64 (2.0.6-4) over (2.0.6-3) ... 123s Preparing to unpack .../53-libmm-glib0_1.23.4-0ubuntu3_amd64.deb ... 123s Unpacking libmm-glib0:amd64 (1.23.4-0ubuntu3) over (1.23.4-0ubuntu2) ... 123s Preparing to unpack .../54-htop_3.4.0-2_amd64.deb ... 123s Unpacking htop (3.4.0-2) over (3.3.0-5) ... 123s Preparing to unpack .../55-linux-firmware_20250310.git9e1370d3-0ubuntu1_amd64.deb ... 123s Unpacking linux-firmware (20250310.git9e1370d3-0ubuntu1) over (20250204.git0fd450ee-0ubuntu1) ... 126s Preparing to unpack .../56-initramfs-tools_0.146ubuntu1_all.deb ... 126s Unpacking initramfs-tools (0.146ubuntu1) over (0.145ubuntu3) ... 126s Preparing to unpack .../57-initramfs-tools-core_0.146ubuntu1_all.deb ... 126s Unpacking initramfs-tools-core (0.146ubuntu1) over (0.145ubuntu3) ... 126s Preparing to unpack .../58-initramfs-tools-bin_0.146ubuntu1_amd64.deb ... 126s Unpacking initramfs-tools-bin (0.146ubuntu1) over (0.145ubuntu3) ... 126s Selecting previously unselected package libdebuginfod1t64:amd64. 126s Preparing to unpack .../59-libdebuginfod1t64_0.192-4_amd64.deb ... 126s Unpacking libdebuginfod1t64:amd64 (0.192-4) ... 126s Preparing to unpack .../60-libftdi1-2_1.5-8build1_amd64.deb ... 126s Unpacking libftdi1-2:amd64 (1.5-8build1) over (1.5-8) ... 126s Preparing to unpack .../61-libgpgme11t64_1.24.2-1ubuntu2_amd64.deb ... 126s Unpacking libgpgme11t64:amd64 (1.24.2-1ubuntu2) over (1.24.2-1ubuntu1) ... 126s Preparing to unpack .../62-libjemalloc2_5.3.0-3_amd64.deb ... 126s Unpacking libjemalloc2:amd64 (5.3.0-3) over (5.3.0-2build1) ... 126s Selecting previously unselected package linux-modules-6.14.0-10-generic. 126s Preparing to unpack .../63-linux-modules-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 126s Unpacking linux-modules-6.14.0-10-generic (6.14.0-10.10) ... 127s Selecting previously unselected package linux-image-6.14.0-10-generic. 127s Preparing to unpack .../64-linux-image-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 127s Unpacking linux-image-6.14.0-10-generic (6.14.0-10.10) ... 127s Selecting previously unselected package linux-modules-extra-6.14.0-10-generic. 127s Preparing to unpack .../65-linux-modules-extra-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 127s Unpacking linux-modules-extra-6.14.0-10-generic (6.14.0-10.10) ... 128s Preparing to unpack .../66-linux-generic_6.14.0-10.10_amd64.deb ... 128s Unpacking linux-generic (6.14.0-10.10) over (6.12.0-16.16+2) ... 128s Preparing to unpack .../67-linux-image-generic_6.14.0-10.10_amd64.deb ... 128s 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(1.0.6-6) over (1.0.6-5) ... 133s Preparing to unpack .../79-python3-rpds-py_0.21.0-2ubuntu2_amd64.deb ... 133s Unpacking python3-rpds-py (0.21.0-2ubuntu2) over (0.21.0-2ubuntu1) ... 133s Preparing to unpack .../80-python3-systemd_235-1build6_amd64.deb ... 133s Unpacking python3-systemd (235-1build6) over (235-1build5) ... 133s Preparing to unpack .../81-python3.13-gdbm_3.13.2-2_amd64.deb ... 133s Unpacking python3.13-gdbm (3.13.2-2) over (3.13.2-1) ... 133s Preparing to unpack .../82-ubuntu-kernel-accessories_1.549_amd64.deb ... 133s Unpacking ubuntu-kernel-accessories (1.549) over (1.548) ... 133s Preparing to unpack .../83-cloud-init_25.1-0ubuntu3_all.deb ... 133s Unpacking cloud-init (25.1-0ubuntu3) over (25.1-0ubuntu2) ... 133s Preparing to unpack .../84-python3-bcrypt_4.2.0-2.1build1_amd64.deb ... 133s Unpacking python3-bcrypt (4.2.0-2.1build1) over (4.2.0-2.1) ... 133s Setting up linux-headers-6.14.0-10 (6.14.0-10.10) ... 133s Setting up media-types (13.0.0) ... 133s Installing new version of config file /etc/mime.types ... 133s Setting up linux-headers-6.14.0-10-generic (6.14.0-10.10) ... 133s Setting up ubuntu-kernel-accessories (1.549) ... 133s Setting up libapparmor1:amd64 (4.1.0~beta5-0ubuntu8) ... 133s Setting up pci.ids (0.0~2025.03.09-1) ... 133s Setting up libnewt0.52:amd64 (0.52.24-4ubuntu2) ... 133s Setting up apt-utils (2.9.33) ... 133s Setting up libdebuginfod-common (0.192-4) ... 133s Setting up exfatprogs (1.2.8-1) ... 133s Setting up linux-firmware (20250310.git9e1370d3-0ubuntu1) ... 133s Setting up bpftool (7.6.0+6.14.0-10.10) ... 133s Setting up libestr0:amd64 (0.1.11-2) ... 133s Setting up libbrotli1:amd64 (1.1.0-2build4) ... 133s Setting up libsqlite3-0:amd64 (3.46.1-2) ... 133s Setting up dosfstools (4.2-1.2) ... 133s Setting up rsyslog (8.2412.0-2ubuntu2) ... 134s info: The user `syslog' is already a member of `adm'. 135s Setting up binutils-common:amd64 (2.44-3ubuntu1) ... 135s Setting up libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) ... 135s Setting up linux-libc-dev:amd64 (6.14.0-10.10) ... 135s Setting up libctf-nobfd0:amd64 (2.44-3ubuntu1) ... 135s Setting up systemd (257.3-1ubuntu3) ... 135s /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring. 135s Created symlink '/run/systemd/system/tmp.mount' → '/dev/null'. 135s /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring. 136s Setting up libparted2t64:amd64 (3.6-5) ... 136s Removing 'diversion of /lib/x86_64-linux-gnu/libparted.so.2 to /lib/x86_64-linux-gnu/libparted.so.2.usr-is-merged by libparted2t64' 136s Removing 'diversion of /lib/x86_64-linux-gnu/libparted.so.2.0.5 to /lib/x86_64-linux-gnu/libparted.so.2.0.5.usr-is-merged by libparted2t64' 136s Setting up linux-headers-generic (6.14.0-10.10) ... 136s Setting up libjemalloc2:amd64 (5.3.0-3) ... 136s Setting up locales (2.41-1ubuntu1) ... 136s Installing new version of config file /etc/locale.alias ... 136s Generating locales (this might take a while)... 138s en_US.UTF-8... done 138s Generation complete. 138s Setting up libsframe1:amd64 (2.44-3ubuntu1) ... 138s Setting up libpython3.13-minimal:amd64 (3.13.2-2) ... 138s Setting up apparmor (4.1.0~beta5-0ubuntu8) ... 138s Installing new version of config file /etc/apparmor.d/fusermount3 ... 138s Installing new version of config file /etc/apparmor.d/lsusb ... 138s Installing new version of config file /etc/apparmor.d/openvpn ... 139s Reloading AppArmor profiles 141s Setting up libftdi1-2:amd64 (1.5-8build1) ... 141s Setting up libglib2.0-data (2.84.0-1) ... 141s Setting up systemd-cryptsetup (257.3-1ubuntu3) ... 141s Setting up libncurses6:amd64 (6.5+20250216-2) ... 141s Setting up strace (6.13+ds-1ubuntu1) ... 141s Setting up xz-utils (5.6.4-1) ... 141s Setting up systemd-timesyncd (257.3-1ubuntu3) ... 141s systemd-time-wait-sync.service is a disabled or a static unit not running, not starting it. 141s Setting up libatomic1:amd64 (15-20250222-0ubuntu1) ... 141s Setting up udev (257.3-1ubuntu3) ... 142s Setting up linux-modules-6.14.0-10-generic (6.14.0-10.10) ... 144s Setting up libncursesw6:amd64 (6.5+20250216-2) ... 144s Setting up libpci3:amd64 (1:3.13.0-2) ... 144s Setting up whiptail (0.52.24-4ubuntu2) ... 144s Setting up python-apt-common (2.9.9build1) ... 144s Setting up pnp.ids (0.393-3) ... 144s Setting up libnl-3-200:amd64 (3.7.0-1) ... 144s Setting up python3.13-minimal (3.13.2-2) ... 145s Setting up libgpgme11t64:amd64 (1.24.2-1ubuntu2) ... 145s Setting up libbinutils:amd64 (2.44-3ubuntu1) ... 145s Setting up libc-dev-bin (2.41-1ubuntu1) ... 145s Setting up libpython3.13-stdlib:amd64 (3.13.2-2) ... 145s Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2ubuntu5) ... 145s Setting up rsync (3.4.1+ds1-3) ... 146s rsync.service is a disabled or a static unit not running, not starting it. 146s Setting up python3.13-gdbm (3.13.2-2) ... 146s Setting up libpython3-stdlib:amd64 (3.13.2-2) ... 146s Setting up systemd-resolved (257.3-1ubuntu3) ... 147s Setting up initramfs-tools-bin (0.146ubuntu1) ... 147s Setting up ncurses-term (6.5+20250216-2) ... 147s Setting up libctf0:amd64 (2.44-3ubuntu1) ... 147s Setting up libpython3.13:amd64 (3.13.2-2) ... 147s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 147s Setting up libdebuginfod1t64:amd64 (0.192-4) ... 147s Setting up systemd-sysv (257.3-1ubuntu3) ... 147s Setting up linux-headers-virtual (6.14.0-10.10) ... 147s Setting up libcurl4t64:amd64 (8.12.1-3ubuntu1) ... 147s Setting up python3.13 (3.13.2-2) ... 148s Setting up htop (3.4.0-2) ... 148s Setting up linux-image-6.14.0-10-generic (6.14.0-10.10) ... 150s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.12.0-16-generic 150s I: /boot/initrd.img.old is now a symlink to initrd.img-6.12.0-16-generic 150s I: /boot/vmlinuz is now a symlink to vmlinuz-6.14.0-10-generic 150s I: /boot/initrd.img is now a symlink to initrd.img-6.14.0-10-generic 150s Setting up parted (3.6-5) ... 150s Setting up libnss-systemd:amd64 (257.3-1ubuntu3) ... 150s Setting up python3 (3.13.2-2) ... 150s Setting up python3-newt:amd64 (0.52.24-4ubuntu2) ... 150s Setting up python3-markupsafe (2.1.5-1build4) ... 150s Setting up linux-modules-extra-6.14.0-10-generic (6.14.0-10.10) ... 152s Setting up libnl-route-3-200:amd64 (3.7.0-1) ... 152s Setting up hwdata (0.393-3) ... 152s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 153s Setting up libglib2.0-0t64:amd64 (2.84.0-1) ... 153s No schema files found: doing nothing. 153s Setting up libgprofng0:amd64 (2.44-3ubuntu1) ... 153s Setting up linux-perf (6.14.0-10.10) ... 153s Setting up gir1.2-glib-2.0:amd64 (2.84.0-1) ... 153s Setting up pciutils (1:3.13.0-2) ... 153s Setting up python3-rpds-py (0.21.0-2ubuntu2) ... 153s Setting up libmm-glib0:amd64 (1.23.4-0ubuntu3) ... 153s Setting up libnl-genl-3-200:amd64 (3.7.0-1) ... 153s Setting up libpam-systemd:amd64 (257.3-1ubuntu3) ... 153s Setting up libc6-dev:amd64 (2.41-1ubuntu1) ... 153s Setting up libgirepository-1.0-1:amd64 (1.83.4-1) ... 153s Setting up curl (8.12.1-3ubuntu1) ... 153s Setting up linux-image-virtual (6.14.0-10.10) ... 153s Setting up initramfs-tools-core (0.146ubuntu1) ... 153s Setting up linux-tools-common (6.14.0-10.10) ... 153s Setting up python3-systemd (235-1build6) ... 153s Setting up python3-cffi-backend:amd64 (1.17.1-2build2) ... 153s Setting up binutils-x86-64-linux-gnu (2.44-3ubuntu1) ... 153s Setting up linux-image-generic (6.14.0-10.10) ... 153s Setting up python3-dbus (1.3.2-5build5) ... 153s Setting up linux-tools-6.14.0-10 (6.14.0-10.10) ... 153s Setting up initramfs-tools (0.146ubuntu1) ... 153s Installing new version of config file /etc/kernel/postinst.d/initramfs-tools ... 153s Installing new version of config file /etc/kernel/postrm.d/initramfs-tools ... 153s update-initramfs: deferring update (trigger activated) 153s Setting up linux-generic (6.14.0-10.10) ... 153s Setting up ubuntu-minimal (1.549) ... 153s Setting up python3-apt (2.9.9build1) ... 153s Setting up python3-bcrypt (4.2.0-2.1build1) ... 154s Setting up python3-yaml (6.0.2-1build2) ... 154s Setting up libfwupd3:amd64 (2.0.6-4) ... 154s Setting up python3-lazr.uri (1.0.6-6) ... 154s Setting up binutils (2.44-3ubuntu1) ... 154s Setting up ubuntu-standard (1.549) ... 154s Setting up cloud-init-base (25.1-0ubuntu3) ... 156s Setting up linux-virtual (6.14.0-10.10) ... 156s Setting up gir1.2-girepository-2.0:amd64 (1.83.4-1) ... 156s Setting up python3-gi (3.50.0-4build1) ... 156s Setting up linux-tools-6.14.0-10-generic (6.14.0-10.10) ... 156s Setting up fwupd (2.0.6-4) ... 156s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 156s fwupd.service is a disabled or a static unit not running, not starting it. 156s Setting up cloud-init (25.1-0ubuntu3) ... 156s Processing triggers for man-db (2.13.0-1) ... 158s Processing triggers for dbus (1.16.2-1ubuntu1) ... 158s Processing triggers for shared-mime-info (2.4-5) ... 158s Warning: program compiled against libxml 212 using older 209 159s Processing triggers for libc-bin (2.41-1ubuntu1) ... 159s Processing triggers for linux-image-6.14.0-10-generic (6.14.0-10.10) ... 159s /etc/kernel/postinst.d/initramfs-tools: 159s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 159s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 170s /etc/kernel/postinst.d/zz-update-grub: 170s Sourcing file `/etc/default/grub' 170s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 170s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 170s Generating grub configuration file ... 170s Found linux image: /boot/vmlinuz-6.14.0-10-generic 170s Found initrd image: /boot/initrd.img-6.14.0-10-generic 170s Found linux image: /boot/vmlinuz-6.12.0-16-generic 170s Found initrd image: /boot/initrd.img-6.12.0-16-generic 171s Found linux image: /boot/vmlinuz-6.11.0-8-generic 171s Found initrd image: /boot/initrd.img-6.11.0-8-generic 171s Warning: os-prober will not be executed to detect other bootable partitions. 171s Systems on them will not be added to the GRUB boot configuration. 171s Check GRUB_DISABLE_OS_PROBER documentation entry. 171s Adding boot menu entry for UEFI Firmware Settings ... 171s done 171s Processing triggers for initramfs-tools (0.146ubuntu1) ... 171s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 171s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 183s Reading package lists... 183s Building dependency tree... 183s Reading state information... 183s Solving dependencies... 184s The following packages will be REMOVED: 184s libnl-genl-3-200* libnsl2* libpython3.12-minimal* libpython3.12-stdlib* 184s libpython3.12t64* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 184s linux-headers-6.12.0-16* linux-headers-6.12.0-16-generic* 184s linux-image-6.11.0-8-generic* linux-image-6.12.0-16-generic* 184s linux-modules-6.11.0-8-generic* linux-modules-6.12.0-16-generic* 184s linux-modules-extra-6.12.0-16-generic* linux-tools-6.11.0-8* 184s linux-tools-6.11.0-8-generic* linux-tools-6.12.0-16* 184s linux-tools-6.12.0-16-generic* 184s 0 upgraded, 0 newly installed, 18 to remove and 5 not upgraded. 184s After this operation, 545 MB disk space will be freed. 184s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 148643 files and directories currently installed.) 184s Removing libnl-genl-3-200:amd64 (3.7.0-1) ... 184s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 184s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 184s Removing libpython3.12t64:amd64 (3.12.9-1) ... 184s Removing libpython3.12-stdlib:amd64 (3.12.9-1) ... 184s Removing libnsl2:amd64 (1.3.0-3build3) ... 184s Removing libpython3.12-minimal:amd64 (3.12.9-1) ... 184s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 185s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 187s Removing linux-headers-6.12.0-16-generic (6.12.0-16.16) ... 187s Removing linux-headers-6.12.0-16 (6.12.0-16.16) ... 189s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 190s /etc/kernel/postrm.d/initramfs-tools: 190s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 190s /etc/kernel/postrm.d/zz-update-grub: 190s Sourcing file `/etc/default/grub' 190s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 190s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 190s Generating grub configuration file ... 190s Found linux image: /boot/vmlinuz-6.14.0-10-generic 190s Found initrd image: /boot/initrd.img-6.14.0-10-generic 190s Found linux image: /boot/vmlinuz-6.12.0-16-generic 190s Found initrd image: /boot/initrd.img-6.12.0-16-generic 191s Warning: os-prober will not be executed to detect other bootable partitions. 191s Systems on them will not be added to the GRUB boot configuration. 191s Check GRUB_DISABLE_OS_PROBER documentation entry. 191s Adding boot menu entry for UEFI Firmware Settings ... 191s done 191s Removing linux-image-6.12.0-16-generic (6.12.0-16.16) ... 191s W: Removing the running kernel 191s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic 191s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic 191s /etc/kernel/postrm.d/initramfs-tools: 191s update-initramfs: Deleting /boot/initrd.img-6.12.0-16-generic 191s /etc/kernel/postrm.d/zz-update-grub: 191s Sourcing file `/etc/default/grub' 191s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 191s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 191s Generating grub configuration file ... 191s Found linux image: /boot/vmlinuz-6.14.0-10-generic 191s Found initrd image: /boot/initrd.img-6.14.0-10-generic 191s Warning: os-prober will not be executed to detect other bootable partitions. 191s Systems on them will not be added to the GRUB boot configuration. 191s Check GRUB_DISABLE_OS_PROBER documentation entry. 191s Adding boot menu entry for UEFI Firmware Settings ... 191s done 191s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 192s Removing linux-modules-extra-6.12.0-16-generic (6.12.0-16.16) ... 193s Removing linux-modules-6.12.0-16-generic (6.12.0-16.16) ... 193s Removing linux-tools-6.12.0-16-generic (6.12.0-16.16) ... 193s Removing linux-tools-6.12.0-16 (6.12.0-16.16) ... 193s Processing triggers for libc-bin (2.41-1ubuntu1) ... 193s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76972 files and directories currently installed.) 193s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 194s Purging configuration files for libpython3.12-minimal:amd64 (3.12.9-1) ... 194s Purging configuration files for linux-modules-extra-6.12.0-16-generic (6.12.0-16.16) ... 194s Purging configuration files for linux-modules-6.12.0-16-generic (6.12.0-16.16) ... 194s dpkg: warning: while removing linux-modules-6.12.0-16-generic, directory '/lib/modules/6.12.0-16-generic' not empty so not removed 194s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 194s Purging configuration files for linux-image-6.12.0-16-generic (6.12.0-16.16) ... 194s rmdir: failed to remove '/lib/modules/6.12.0-16-generic': Directory not empty 194s autopkgtest [22:35:23]: upgrading testbed (apt dist-upgrade and autopurge) 194s Reading package lists... 194s Building dependency tree... 194s Reading state information... 195s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 195s Starting 2 pkgProblemResolver with broken count: 0 195s Done 195s Entering ResolveByKeep 196s 196s Calculating upgrade... 196s The following packages will be upgraded: 196s libc-bin libc-dev-bin libc6 libc6-dev locales 196s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 196s Need to get 10.5 MB of archives. 196s After this operation, 1024 B of additional disk space will be used. 196s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6-dev amd64 2.41-1ubuntu2 [2183 kB] 197s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-dev-bin amd64 2.41-1ubuntu2 [24.7 kB] 197s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6 amd64 2.41-1ubuntu2 [3327 kB] 197s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-bin amd64 2.41-1ubuntu2 [700 kB] 197s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 locales all 2.41-1ubuntu2 [4246 kB] 198s Preconfiguring packages ... 198s Fetched 10.5 MB in 2s (6751 kB/s) 198s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 198s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_amd64.deb ... 198s Unpacking libc6-dev:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 198s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_amd64.deb ... 198s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 198s Preparing to unpack .../libc6_2.41-1ubuntu2_amd64.deb ... 198s Unpacking libc6:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 199s Setting up libc6:amd64 (2.41-1ubuntu2) ... 199s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 199s Preparing to unpack .../libc-bin_2.41-1ubuntu2_amd64.deb ... 199s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 199s Setting up libc-bin (2.41-1ubuntu2) ... 199s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 199s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 199s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 199s Setting up locales (2.41-1ubuntu2) ... 200s Generating locales (this might take a while)... 201s en_US.UTF-8... done 201s Generation complete. 202s Setting up libc-dev-bin (2.41-1ubuntu2) ... 202s Setting up libc6-dev:amd64 (2.41-1ubuntu2) ... 202s Processing triggers for man-db (2.13.0-1) ... 202s Processing triggers for systemd (257.3-1ubuntu3) ... 203s Reading package lists... 204s Building dependency tree... 204s Reading state information... 204s Starting pkgProblemResolver with broken count: 0 204s Starting 2 pkgProblemResolver with broken count: 0 204s Done 204s Solving dependencies... 205s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 205s autopkgtest [22:35:34]: rebooting testbed after setup commands that affected boot 229s autopkgtest [22:35:58]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 16:07:00 UTC 2025 231s autopkgtest [22:36:00]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-sparsesvd 233s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-sparsesvd 0.2-2-1 (dsc) [2111 B] 233s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-sparsesvd 0.2-2-1 (tar) [37.9 kB] 233s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-sparsesvd 0.2-2-1 (diff) [2868 B] 234s gpgv: Signature made Sat Jan 21 16:19:49 2023 UTC 234s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 234s gpgv: issuer "tille@debian.org" 234s gpgv: Can't check signature: No public key 234s dpkg-source: warning: cannot verify inline signature for ./r-cran-sparsesvd_0.2-2-1.dsc: no acceptable signature found 234s autopkgtest [22:36:03]: testing package r-cran-sparsesvd version 0.2-2-1 234s autopkgtest [22:36:03]: build not needed 238s autopkgtest [22:36:07]: test run-unit-test: preparing testbed 238s Reading package lists... 239s Building dependency tree... 239s Reading state information... 239s Starting pkgProblemResolver with broken count: 0 239s Starting 2 pkgProblemResolver with broken count: 0 239s Done 239s The following NEW packages will be installed: 239s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3 239s libcairo2 libdatrie1 libdeflate0 libfontconfig1 libgfortran5 libgomp1 239s libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8 239s liblapack3 liblerc4 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 239s libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6 239s libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0 239s libxft2 libxrender1 libxss1 libxt6t64 r-base-core r-cran-lattice 239s r-cran-matrix r-cran-sparsesvd unzip x11-common xdg-utils zip 240s 0 upgraded, 47 newly installed, 0 to remove and 0 not upgraded. 240s Need to get 47.0 MB of archives. 240s After this operation, 95.7 MB of additional disk space will be used. 240s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 240s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 240s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-2ubuntu1 [37.4 kB] 240s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-2ubuntu1 [164 kB] 240s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-2ubuntu1 [180 kB] 240s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 240s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 240s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 240s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 240s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 240s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 240s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 240s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB] 240s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 15-20250222-0ubuntu1 [919 kB] 240s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 15-20250222-0ubuntu1 [148 kB] 240s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 240s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB] 240s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 240s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 240s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 240s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 240s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 240s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 240s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 240s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 240s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.56.2-1 [255 kB] 240s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.56.2-1 [52.6 kB] 241s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.56.2-1 [29.1 kB] 241s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB] 241s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB] 241s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 241s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 241s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB] 241s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 241s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 241s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 241s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 241s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 241s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB] 241s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 241s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu2 [185 kB] 241s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 241s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 241s Get:44 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.3-1 [28.9 MB] 242s Get:45 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 242s Get:46 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrix amd64 1.7-3-1 [4349 kB] 242s Get:47 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sparsesvd amd64 0.2-2-1 [39.3 kB] 243s Preconfiguring packages ... 243s Fetched 47.0 MB in 3s (15.8 MB/s) 243s Selecting previously unselected package fonts-dejavu-mono. 243s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 243s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8_all.deb ... 243s Unpacking fonts-dejavu-mono (2.37-8) ... 243s Selecting previously unselected package fonts-dejavu-core. 243s Preparing to unpack .../01-fonts-dejavu-core_2.37-8_all.deb ... 243s Unpacking fonts-dejavu-core (2.37-8) ... 243s Selecting previously unselected package fontconfig-config. 243s Preparing to unpack .../02-fontconfig-config_2.15.0-2ubuntu1_amd64.deb ... 243s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 243s Selecting previously unselected package libfontconfig1:amd64. 243s Preparing to unpack .../03-libfontconfig1_2.15.0-2ubuntu1_amd64.deb ... 243s Unpacking libfontconfig1:amd64 (2.15.0-2ubuntu1) ... 243s Selecting previously unselected package fontconfig. 243s Preparing to unpack .../04-fontconfig_2.15.0-2ubuntu1_amd64.deb ... 243s Unpacking fontconfig (2.15.0-2ubuntu1) ... 244s Selecting previously unselected package libblas3:amd64. 244s Preparing to unpack .../05-libblas3_3.12.1-2_amd64.deb ... 244s Unpacking libblas3:amd64 (3.12.1-2) ... 244s Selecting previously unselected package libpixman-1-0:amd64. 244s Preparing to unpack .../06-libpixman-1-0_0.44.0-3_amd64.deb ... 244s Unpacking libpixman-1-0:amd64 (0.44.0-3) ... 244s Selecting previously unselected package libxcb-render0:amd64. 244s Preparing to unpack .../07-libxcb-render0_1.17.0-2_amd64.deb ... 244s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 244s Selecting previously unselected package libxcb-shm0:amd64. 244s Preparing to unpack .../08-libxcb-shm0_1.17.0-2_amd64.deb ... 244s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 244s Selecting previously unselected package libxrender1:amd64. 244s Preparing to unpack .../09-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 244s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 244s Selecting previously unselected package libcairo2:amd64. 244s Preparing to unpack .../10-libcairo2_1.18.2-2_amd64.deb ... 244s Unpacking libcairo2:amd64 (1.18.2-2) ... 244s Selecting previously unselected package libdatrie1:amd64. 244s Preparing to unpack .../11-libdatrie1_0.2.13-3build1_amd64.deb ... 244s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 244s Selecting previously unselected package libdeflate0:amd64. 244s Preparing to unpack .../12-libdeflate0_1.23-1_amd64.deb ... 244s Unpacking libdeflate0:amd64 (1.23-1) ... 244s Selecting previously unselected package libgfortran5:amd64. 244s Preparing to unpack .../13-libgfortran5_15-20250222-0ubuntu1_amd64.deb ... 244s Unpacking libgfortran5:amd64 (15-20250222-0ubuntu1) ... 244s Selecting previously unselected package libgomp1:amd64. 244s Preparing to unpack .../14-libgomp1_15-20250222-0ubuntu1_amd64.deb ... 244s Unpacking libgomp1:amd64 (15-20250222-0ubuntu1) ... 244s Selecting previously unselected package libgraphite2-3:amd64. 244s Preparing to unpack .../15-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 244s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 244s Selecting previously unselected package libharfbuzz0b:amd64. 244s Preparing to unpack .../16-libharfbuzz0b_10.2.0-1_amd64.deb ... 244s Unpacking libharfbuzz0b:amd64 (10.2.0-1) ... 244s Selecting previously unselected package x11-common. 244s Preparing to unpack .../17-x11-common_1%3a7.7+23ubuntu3_all.deb ... 244s Unpacking x11-common (1:7.7+23ubuntu3) ... 244s Selecting previously unselected package libice6:amd64. 244s Preparing to unpack .../18-libice6_2%3a1.1.1-1_amd64.deb ... 244s Unpacking libice6:amd64 (2:1.1.1-1) ... 244s Selecting previously unselected package libjpeg-turbo8:amd64. 244s Preparing to unpack .../19-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ... 244s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 244s Selecting previously unselected package libjpeg8:amd64. 244s Preparing to unpack .../20-libjpeg8_8c-2ubuntu11_amd64.deb ... 244s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 244s Selecting previously unselected package liblapack3:amd64. 244s Preparing to unpack .../21-liblapack3_3.12.1-2_amd64.deb ... 244s Unpacking liblapack3:amd64 (3.12.1-2) ... 244s Selecting previously unselected package liblerc4:amd64. 244s Preparing to unpack .../22-liblerc4_4.0.0+ds-5ubuntu1_amd64.deb ... 244s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 244s Selecting previously unselected package libthai-data. 244s Preparing to unpack .../23-libthai-data_0.1.29-2build1_all.deb ... 244s Unpacking libthai-data (0.1.29-2build1) ... 244s Selecting previously unselected package libthai0:amd64. 244s Preparing to unpack .../24-libthai0_0.1.29-2build1_amd64.deb ... 244s Unpacking libthai0:amd64 (0.1.29-2build1) ... 244s Selecting previously unselected package libpango-1.0-0:amd64. 244s Preparing to unpack .../25-libpango-1.0-0_1.56.2-1_amd64.deb ... 244s Unpacking libpango-1.0-0:amd64 (1.56.2-1) ... 244s Selecting previously unselected package libpangoft2-1.0-0:amd64. 244s Preparing to unpack .../26-libpangoft2-1.0-0_1.56.2-1_amd64.deb ... 244s Unpacking libpangoft2-1.0-0:amd64 (1.56.2-1) ... 244s Selecting previously unselected package libpangocairo-1.0-0:amd64. 244s Preparing to unpack .../27-libpangocairo-1.0-0_1.56.2-1_amd64.deb ... 244s Unpacking libpangocairo-1.0-0:amd64 (1.56.2-1) ... 244s Selecting previously unselected package libpaper2:amd64. 244s Preparing to unpack .../28-libpaper2_2.2.5-0.3_amd64.deb ... 244s Unpacking libpaper2:amd64 (2.2.5-0.3) ... 244s Selecting previously unselected package libpaper-utils. 244s Preparing to unpack .../29-libpaper-utils_2.2.5-0.3_amd64.deb ... 244s Unpacking libpaper-utils (2.2.5-0.3) ... 244s Selecting previously unselected package libsharpyuv0:amd64. 244s Preparing to unpack .../30-libsharpyuv0_1.5.0-0.1_amd64.deb ... 244s Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ... 244s Selecting previously unselected package libsm6:amd64. 244s Preparing to unpack .../31-libsm6_2%3a1.2.4-1_amd64.deb ... 244s Unpacking libsm6:amd64 (2:1.2.4-1) ... 244s Selecting previously unselected package libtcl8.6:amd64. 244s Preparing to unpack .../32-libtcl8.6_8.6.16+dfsg-1_amd64.deb ... 244s Unpacking libtcl8.6:amd64 (8.6.16+dfsg-1) ... 244s Selecting previously unselected package libjbig0:amd64. 244s Preparing to unpack .../33-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 244s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 244s Selecting previously unselected package libwebp7:amd64. 244s Preparing to unpack .../34-libwebp7_1.5.0-0.1_amd64.deb ... 244s Unpacking libwebp7:amd64 (1.5.0-0.1) ... 244s Selecting previously unselected package libtiff6:amd64. 244s Preparing to unpack .../35-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ... 244s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 244s Selecting previously unselected package libxft2:amd64. 244s Preparing to unpack .../36-libxft2_2.3.6-1build1_amd64.deb ... 244s Unpacking libxft2:amd64 (2.3.6-1build1) ... 245s Selecting previously unselected package libxss1:amd64. 245s Preparing to unpack .../37-libxss1_1%3a1.2.3-1build3_amd64.deb ... 245s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 245s Selecting previously unselected package libtk8.6:amd64. 245s Preparing to unpack .../38-libtk8.6_8.6.16-1_amd64.deb ... 245s Unpacking libtk8.6:amd64 (8.6.16-1) ... 245s Selecting previously unselected package libxt6t64:amd64. 245s Preparing to unpack .../39-libxt6t64_1%3a1.2.1-1.2build1_amd64.deb ... 245s Unpacking libxt6t64:amd64 (1:1.2.1-1.2build1) ... 245s Selecting previously unselected package zip. 245s Preparing to unpack .../40-zip_3.0-14ubuntu2_amd64.deb ... 245s Unpacking zip (3.0-14ubuntu2) ... 245s Selecting previously unselected package unzip. 245s Preparing to unpack .../41-unzip_6.0-28ubuntu6_amd64.deb ... 245s Unpacking unzip (6.0-28ubuntu6) ... 245s Selecting previously unselected package xdg-utils. 245s Preparing to unpack .../42-xdg-utils_1.2.1-2ubuntu1_all.deb ... 245s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 245s Selecting previously unselected package r-base-core. 245s Preparing to unpack .../43-r-base-core_4.4.3-1_amd64.deb ... 245s Unpacking r-base-core (4.4.3-1) ... 245s Selecting previously unselected package r-cran-lattice. 245s Preparing to unpack .../44-r-cran-lattice_0.22-6-1_amd64.deb ... 245s Unpacking r-cran-lattice (0.22-6-1) ... 245s Selecting previously unselected package r-cran-matrix. 245s Preparing to unpack .../45-r-cran-matrix_1.7-3-1_amd64.deb ... 245s Unpacking r-cran-matrix (1.7-3-1) ... 245s Selecting previously unselected package r-cran-sparsesvd. 245s Preparing to unpack .../46-r-cran-sparsesvd_0.2-2-1_amd64.deb ... 245s Unpacking r-cran-sparsesvd (0.2-2-1) ... 245s Setting up libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 245s Setting up libpixman-1-0:amd64 (0.44.0-3) ... 245s Setting up libsharpyuv0:amd64 (1.5.0-0.1) ... 245s Setting up liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 245s Setting up libxrender1:amd64 (1:0.9.10-1.1build1) ... 245s Setting up libdatrie1:amd64 (0.2.13-3build1) ... 245s Setting up libxcb-render0:amd64 (1.17.0-2) ... 245s Setting up unzip (6.0-28ubuntu6) ... 245s Setting up x11-common (1:7.7+23ubuntu3) ... 246s Setting up libdeflate0:amd64 (1.23-1) ... 246s Setting up libxcb-shm0:amd64 (1.17.0-2) ... 246s Setting up libgomp1:amd64 (15-20250222-0ubuntu1) ... 246s Setting up libjbig0:amd64 (2.1-6.1ubuntu2) ... 246s Setting up zip (3.0-14ubuntu2) ... 246s Setting up libblas3:amd64 (3.12.1-2) ... 246s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 246s Setting up fonts-dejavu-mono (2.37-8) ... 246s Setting up libtcl8.6:amd64 (8.6.16+dfsg-1) ... 246s Setting up fonts-dejavu-core (2.37-8) ... 246s Setting up libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 246s Setting up libgfortran5:amd64 (15-20250222-0ubuntu1) ... 246s Setting up libwebp7:amd64 (1.5.0-0.1) ... 246s Setting up libharfbuzz0b:amd64 (10.2.0-1) ... 246s Setting up libthai-data (0.1.29-2build1) ... 246s Setting up libxss1:amd64 (1:1.2.3-1build3) ... 246s Setting up libpaper2:amd64 (2.2.5-0.3) ... 246s Setting up xdg-utils (1.2.1-2ubuntu1) ... 246s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 246s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 246s Setting up libice6:amd64 (2:1.1.1-1) ... 246s Setting up liblapack3:amd64 (3.12.1-2) ... 246s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 246s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 246s Setting up libpaper-utils (2.2.5-0.3) ... 246s Setting up libthai0:amd64 (0.1.29-2build1) ... 246s Setting up libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 246s Setting up libfontconfig1:amd64 (2.15.0-2ubuntu1) ... 246s Setting up libsm6:amd64 (2:1.2.4-1) ... 246s Setting up fontconfig (2.15.0-2ubuntu1) ... 248s Regenerating fonts cache... done. 248s Setting up libxft2:amd64 (2.3.6-1build1) ... 248s Setting up libtk8.6:amd64 (8.6.16-1) ... 248s Setting up libpango-1.0-0:amd64 (1.56.2-1) ... 248s Setting up libcairo2:amd64 (1.18.2-2) ... 248s Setting up libxt6t64:amd64 (1:1.2.1-1.2build1) ... 248s Setting up libpangoft2-1.0-0:amd64 (1.56.2-1) ... 248s Setting up libpangocairo-1.0-0:amd64 (1.56.2-1) ... 248s Setting up r-base-core (4.4.3-1) ... 248s Creating config file /etc/R/Renviron with new version 248s Setting up r-cran-lattice (0.22-6-1) ... 248s Setting up r-cran-matrix (1.7-3-1) ... 248s Setting up r-cran-sparsesvd (0.2-2-1) ... 248s Processing triggers for install-info (7.1.1-1) ... 248s Processing triggers for libc-bin (2.41-1ubuntu2) ... 248s Processing triggers for man-db (2.13.0-1) ... 251s autopkgtest [22:36:20]: test run-unit-test: [----------------------- 251s BEGIN TEST formats.R 251s 251s R version 4.4.3 (2025-02-28) -- "Trophy Case" 251s Copyright (C) 2025 The R Foundation for Statistical Computing 251s Platform: x86_64-pc-linux-gnu 251s 251s R is free software and comes with ABSOLUTELY NO WARRANTY. 251s You are welcome to redistribute it under certain conditions. 251s Type 'license()' or 'licence()' for distribution details. 251s 251s R is a collaborative project with many contributors. 251s Type 'contributors()' for more information and 251s 'citation()' on how to cite R or R packages in publications. 251s 251s Type 'demo()' for some demos, 'help()' for on-line help, or 251s 'help.start()' for an HTML browser interface to help. 251s Type 'q()' to quit R. 251s 251s > ## any sparse matrix format that inherits from dMatrix should work 251s > library(sparsesvd) 252s > library(Matrix) 252s > 252s > M <- rbind( 252s + c(20, 10, 15, 0, 2), 252s + c(10, 5, 8, 1, 0), 252s + c( 0, 1, 2, 6, 3), 252s + c( 1, 0, 0, 10, 5)) 252s > 252s > M1 <- Matrix(M, sparse=TRUE) # standard format (column-compressed) 252s > M1 <- as(M1, "CsparseMatrix") 252s > stopifnot(is(M1, "dgCMatrix")) 252s > res1 <- sparsesvd(M1) 252s > 252s > M2 <- Matrix(M, sparse=FALSE) # dense matrix 252s > stopifnot(is(M2, "dgeMatrix")) 252s > res2 <- sparsesvd(M2) 252s > 252s > M3 <- Matrix(M, sparse=TRUE) # triplet format 252s > M3 <- as(M3, "TsparseMatrix") 252s > stopifnot(is(M3, "dgTMatrix")) 252s > res3 <- sparsesvd(M3) 252s > 252s > M4 <- Matrix(M, sparse=TRUE) # row-compressed 252s > M4 <- as(M4, "RsparseMatrix") 252s > stopifnot(is(M4, "dgRMatrix")) 252s > res4 <- sparsesvd(M4) 252s > ## TODO -- row-compressed form cannot be converted to dgCMatrix 252s > 252s > ## check that eigenvalues are the same 252s > stopifnot(all.equal(res1$d, res2$d, tolerance=1e-12)) 252s > stopifnot(all.equal(res1$d, res3$d, tolerance=1e-12)) 252s > stopifnot(all.equal(res1$d, res4$d, tolerance=1e-12)) 252s > 252s > ## special classes for symmetric matrices 252s > A1 <- crossprod(M1) 252s > A1 <- as(A1, "CsparseMatrix") 252s > stopifnot(is(A1, "dsCMatrix")) 252s > res1a <- sparsesvd(A1) 252s > 252s > A2 <- crossprod(M2) 252s > stopifnot(is(A2, "dpoMatrix")) # dense positive-semidefinite symmetric matrix 252s > res2a <- sparsesvd(A2) 252s > ## -- fails 252s > 252s > A3 <- as(A1, "TsparseMatrix") 252s > stopifnot(is(A3, "dsTMatrix")) 252s > res3a <- sparsesvd(A3) 252s > ## -- symmetric matrix can only be converted if already in row-compressed form 252s > 252s > A4 <- as(A1, "RsparseMatrix") 252s > stopifnot(is(A4, "dsRMatrix")) 252s > res4a <- sparsesvd(A4) 252s > ## -- fails 252s > 252s > ## check that eigenvalues are the same and consistent with M 252s > stopifnot(all.equal(res1a$d, (res1$d)^2, tolerance=1e-12)) 252s > stopifnot(all.equal(res1a$d, res2a$d, tolerance=1e-12)) 252s > stopifnot(all.equal(res1a$d, res3a$d, tolerance=1e-12)) 252s > stopifnot(all.equal(res1a$d, res4a$d, tolerance=1e-12)) 252s > 252s BEGIN TEST iris.R 252s 252s R version 4.4.3 (2025-02-28) -- "Trophy Case" 252s Copyright (C) 2025 The R Foundation for Statistical Computing 252s Platform: x86_64-pc-linux-gnu 252s 252s R is free software and comes with ABSOLUTELY NO WARRANTY. 252s You are welcome to redistribute it under certain conditions. 252s Type 'license()' or 'licence()' for distribution details. 252s 252s R is a collaborative project with many contributors. 252s Type 'contributors()' for more information and 252s 'citation()' on how to cite R or R packages in publications. 252s 252s Type 'demo()' for some demos, 'help()' for on-line help, or 252s 'help.start()' for an HTML browser interface to help. 252s Type 'q()' to quit R. 252s 252s > ## compute PCA of iris data set with svd() and sparsesvd() 252s > library(sparsesvd) 253s > library(Matrix) 253s > 253s > data(iris) 253s > M <- scale(as.matrix(iris[, 1:4]), scale=FALSE) 253s > Ms <- Matrix(M) # not sparse, but a dMatrix 253s > 253s > res1 <- svd(M) 253s > res2 <- sparsesvd(Ms) 253s > 253s > ## check that eigenvalues are the same 253s > print(res2$d, digits=3) 253s [1] 25.10 6.01 3.41 1.88 253s > stopifnot(all.equal(res1$d, res2$d, tolerance=1e-12)) 253s > 253s > ## these should be diagonal unit matrices 253s > UtU <- abs(crossprod(res2$u, res1$u)) # diagonal entries may be 1 or -1 253s > VtV <- abs(crossprod(res2$v, res1$v)) # (because sign of eigenvectors is arbitrary) 253s > I1 <- diag(1, length(res1$d)) 253s > 253s > print(round(UtU, 12)) 253s [,1] [,2] [,3] [,4] 253s [1,] 1 0 0 0 253s [2,] 0 1 0 0 253s [3,] 0 0 1 0 253s [4,] 0 0 0 1 253s > stopifnot(all.equal(UtU, I1, tolerance=1e-12)) 253s > 253s > print(round(VtV, 12)) 253s [,1] [,2] [,3] [,4] 253s [1,] 1 0 0 0 253s [2,] 0 1 0 0 253s [3,] 0 0 1 0 253s [4,] 0 0 0 1 253s > stopifnot(all.equal(VtV, I1, tolerance=1e-12)) 253s > 253s > ## check that SVD is reproducible 253s > ## (this is guaranteed by a deterministic RNG built into the SVDLIBC code) 253s > for (i in 1:20) { 253s + res <- sparsesvd(Ms) 253s + if (!isTRUE(all.equal(res, res2))) stop("SVD not reproducible on iteration #", i) 253s + } 253s > 253s BEGIN TEST loss_of_orthogonality.R 253s 253s R version 4.4.3 (2025-02-28) -- "Trophy Case" 253s Copyright (C) 2025 The R Foundation for Statistical Computing 253s Platform: x86_64-pc-linux-gnu 253s 253s R is free software and comes with ABSOLUTELY NO WARRANTY. 253s You are welcome to redistribute it under certain conditions. 253s Type 'license()' or 'licence()' for distribution details. 253s 253s R is a collaborative project with many contributors. 253s Type 'contributors()' for more information and 253s 'citation()' on how to cite R or R packages in publications. 253s 253s Type 'demo()' for some demos, 'help()' for on-line help, or 253s 'help.start()' for an HTML browser interface to help. 253s Type 'q()' to quit R. 253s 254s > ## SVDLIBC seems to have a bug that leads to incorrect results and infinite loops with 254s > ## highly sparse matrices with invariant subspaces, requiring frequent restarts of the Lanczos iteration. 254s > ## Here we test these issues with several sample matrices (should be fixed in sparsesvd v0.2) 254s > 254s > library(Matrix) 255s > library(sparsesvd) 255s > 255s > check.svd <- function (M, tol=1e-2) { 255s + cat(sprintf("Checking %d x %d matrix %s ...\n", nrow(M), ncol(M), deparse(substitute(M)))) 255s + M.ref <- as.matrix(M) 255s + res <- sparsesvd(M) 255s + M.new <- res$u %*% diag(res$d, length(res$d)) %*% t(res$v) 255s + if (!all(dim(M.new) == dim(M.ref))) stop(sprintf("SVD approximation has wrong dimensions %d x %d", nrow(M.new), ncol(M.new))) 255s + d <- sqrt(sum((M.new - M.ref)^2)) 255s + cat(sprintf(" --> approximation error ||M.new - M.ref||_2 = %g\n", d)) 255s + if (d > tol) { 255s + print(round(M.new, 2)) 255s + print(round(M.ref, 2)) 255s + stop("approximation error exceeds tolerance limit") 255s + } 255s + } 255s > 255s > ## regression tests with repro cases serialised via dput() 255s > Zero <- new("dgCMatrix", i = integer(0), p = c(0L, 0L, 0L, 0L, 0L, 0L), 255s + Dim = c(3L, 5L), Dimnames = list(NULL, NULL), x = numeric(0), factors = list()) 255s > check.svd(Zero) # all-zero matrix 255s Checking 3 x 5 matrix Zero ... 255s --> approximation error ||M.new - M.ref||_2 = 0 255s > 255s > D1 <- 255s + new("dgCMatrix", i = 0:1, p = c(0L, 2L), Dim = 2:1, Dimnames = list( 255s + NULL, NULL), x = c(1, 1), factors = list()) 255s > check.svd(D1) 255s Checking 2 x 1 matrix D1 ... 255s --> approximation error ||M.new - M.ref||_2 = 0 255s > 255s > D2 <- 255s + new("dgCMatrix", i = 0:3, p = c(0L, 2L, 4L), Dim = c(4L, 2L), 255s + Dimnames = list(NULL, NULL), x = c(1, 1, 1, 1), factors = list()) 255s > check.svd(D2) 255s Checking 4 x 2 matrix D2 ... 255s --> approximation error ||M.new - M.ref||_2 = 2.22045e-16 255s > 255s > D5 <- 255s + new("dgCMatrix", i = 0:4, p = 0:5, Dim = c(5L, 5L), Dimnames = list( 255s + NULL, NULL), x = c(1, 1, 1, 1, 1), factors = list()) 255s > check.svd(D5) 255s Checking 5 x 5 matrix D5 ... 255s --> approximation error ||M.new - M.ref||_2 = 3.59691e-15 255s > 255s > D21 <- 255s + new("dgCMatrix", i = 0:21, p = c(0L, 1L, 2L, 3L, 4L, 5L, 6L, 255s + 7L, 8L, 9L, 10L, 12L, 13L, 14L, 15L, 16L, 17L, 18L, 19L, 20L, 255s + 21L, 22L), Dim = 22:21, Dimnames = list(NULL, NULL), x = c(1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1 255s + ), factors = list()) 255s > check.svd(D21) 255s Checking 22 x 21 matrix D21 ... 255s --> approximation error ||M.new - M.ref||_2 = 3.58144e-14 255s > 255s > TermDoc <- 255s + new("dgCMatrix", i = c(0L, 14L, 15L, 13L, 17L, 16L, 4L, 1L, 13L, 255s + 9L, 16L, 6L, 7L, 10L, 9L, 11L, 8L, 14L, 1L, 5L, 16L, 3L, 8L, 255s + 12L, 0L, 14L, 15L, 4L, 3L, 2L, 5L, 2L, 17L, 9L, 3L, 14L, 12L, 255s + 11L, 6L, 7L, 10L, 9L, 3L, 12L), p = c(0L, 3L, 4L, 5L, 6L, 7L, 255s + 9L, 11L, 14L, 16L, 18L, 19L, 21L, 24L, 27L, 28L, 29L, 30L, 31L, 255s + 33L, 34L, 36L, 37L, 38L, 41L, 42L, 44L), Dim = c(18L, 26L), Dimnames = list( 255s + NULL, NULL), x = c(1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1), factors = list()) 255s > check.svd(TermDoc) 255s Checking 18 x 26 matrix TermDoc ... 255s --> approximation error ||M.new - M.ref||_2 = 8.84443e-15 255s > 255s > M <- 255s + new("dgTMatrix", i = c(13L, 46L, 377L, 243L, 298L, 345L, 155L, 255s + 422L, 441L, 77L, 167L, 282L, 375L, 389L, 395L, 28L, 30L, 202L, 255s + 250L, 297L, 69L, 84L, 214L, 234L, 317L, 68L, 135L, 196L, 380L, 255s + 414L, 459L, 114L, 229L, 343L, 406L, 70L, 188L, 223L, 322L, 334L, 255s + 429L, 1L, 53L, 96L, 176L, 239L, 296L, 320L, 346L, 371L, 432L, 255s + 27L, 58L, 74L, 198L, 237L, 253L, 256L, 287L, 440L, 97L, 157L, 255s + 185L, 257L, 93L, 116L, 458L, 99L, 110L, 180L, 186L, 333L, 403L, 255s + 219L, 311L, 382L, 49L, 64L, 123L, 171L, 200L, 264L, 335L, 339L, 255s + 357L, 364L, 366L, 448L, 79L, 281L, 417L, 87L, 105L, 128L, 319L, 255s + 398L, 194L, 249L, 276L, 8L, 59L, 72L, 81L, 242L, 267L, 386L, 255s + 454L, 182L, 207L, 226L, 230L, 431L, 24L, 181L, 294L, 305L, 383L, 255s + 410L, 442L, 22L, 103L, 238L, 306L, 336L, 370L, 2L, 23L, 35L, 255s + 119L, 175L, 266L, 350L, 0L, 50L, 149L, 228L, 293L, 397L, 451L, 255s + 17L, 48L, 83L, 215L, 340L, 420L, 456L, 15L, 142L, 277L, 57L, 255s + 150L, 435L, 11L, 62L, 82L, 85L, 164L, 189L, 279L, 246L, 436L, 255s + 75L, 100L, 163L, 165L, 166L, 170L, 247L, 290L, 407L, 433L, 33L, 255s + 131L, 225L, 3L, 19L, 179L, 418L, 4L, 160L, 338L, 355L, 445L, 255s + 452L, 71L, 158L, 183L, 184L, 203L, 331L, 437L, 156L, 199L, 323L, 255s + 94L, 146L, 208L, 424L, 292L, 394L, 425L, 65L, 125L, 205L, 365L, 255s + 396L, 443L, 52L, 136L, 310L, 76L, 204L, 206L, 212L, 299L, 342L, 255s + 356L, 446L, 73L, 95L, 111L, 187L, 341L, 20L, 309L, 325L, 10L, 255s + 31L, 91L, 178L, 252L, 447L, 121L, 197L, 314L, 25L, 169L, 218L, 255s + 221L, 255L, 295L, 378L, 411L, 444L, 44L, 118L, 271L, 173L, 232L, 255s + 374L, 18L, 159L, 210L, 133L, 244L, 369L, 385L, 162L, 312L, 327L, 255s + 363L, 439L, 36L, 313L, 404L, 423L, 153L, 245L, 251L, 303L, 29L, 255s + 248L, 285L, 145L, 261L, 450L, 7L, 45L, 405L, 430L, 14L, 126L, 255s + 286L, 328L, 388L, 434L, 90L, 332L, 354L, 6L, 61L, 152L, 115L, 255s + 134L, 137L, 154L, 174L, 213L, 258L, 324L, 348L, 391L, 415L, 117L, 255s + 138L, 141L, 231L, 259L, 291L, 315L, 438L, 39L, 112L, 321L, 122L, 255s + 260L, 427L, 26L, 40L, 88L, 192L, 268L, 300L, 280L, 283L, 393L, 255s + 413L, 108L, 120L, 151L, 419L, 21L, 211L, 351L, 161L, 209L, 216L, 255s + 161L, 209L, 216L, 98L, 352L, 401L, 104L, 372L, 412L, 358L, 408L, 255s + 409L, 263L, 362L, 449L, 233L, 361L, 402L, 107L, 140L, 222L, 367L, 255s + 9L, 51L, 113L, 132L, 190L, 191L, 195L, 301L, 307L, 330L, 359L, 255s + 376L, 421L, 426L, 86L, 106L, 127L, 42L, 47L, 60L, 262L, 273L, 255s + 304L, 326L, 344L, 32L, 43L, 329L, 272L, 390L, 392L, 240L, 428L, 255s + 460L, 38L, 102L, 109L, 217L, 274L, 349L, 56L, 241L, 453L, 12L, 255s + 37L, 130L, 254L, 80L, 269L, 288L, 384L, 455L, 92L, 172L, 353L, 255s + 101L, 224L, 302L, 318L, 5L, 78L, 89L, 54L, 139L, 177L, 16L, 34L, 255s + 373L, 124L, 284L, 360L, 63L, 227L, 235L, 270L, 308L, 66L, 129L, 255s + 144L, 147L, 337L, 387L, 143L, 220L, 368L, 201L, 316L, 381L, 55L, 255s + 193L, 399L, 67L, 265L, 379L, 400L, 416L, 236L, 275L, 278L, 148L, 255s + 168L, 289L, 41L, 347L, 457L), j = c(0L, 0L, 0L, 1L, 1L, 1L, 2L, 255s + 2L, 2L, 3L, 3L, 3L, 3L, 3L, 3L, 4L, 4L, 4L, 4L, 4L, 5L, 5L, 5L, 255s + 5L, 5L, 6L, 6L, 6L, 6L, 6L, 6L, 7L, 7L, 7L, 7L, 8L, 8L, 8L, 8L, 255s + 8L, 8L, 9L, 9L, 9L, 9L, 9L, 9L, 9L, 9L, 9L, 9L, 10L, 10L, 10L, 255s + 10L, 10L, 10L, 10L, 10L, 10L, 11L, 11L, 11L, 11L, 12L, 12L, 12L, 255s + 13L, 13L, 13L, 13L, 13L, 13L, 14L, 14L, 14L, 15L, 15L, 15L, 15L, 255s + 15L, 15L, 15L, 15L, 15L, 15L, 15L, 15L, 16L, 16L, 16L, 17L, 17L, 255s + 17L, 17L, 17L, 18L, 18L, 18L, 19L, 19L, 19L, 19L, 19L, 19L, 19L, 255s + 19L, 20L, 20L, 20L, 20L, 20L, 21L, 21L, 21L, 21L, 21L, 21L, 21L, 255s + 22L, 22L, 22L, 22L, 22L, 22L, 23L, 23L, 23L, 23L, 23L, 23L, 23L, 255s + 24L, 24L, 24L, 24L, 24L, 24L, 24L, 25L, 25L, 25L, 25L, 25L, 25L, 255s + 25L, 26L, 26L, 26L, 27L, 27L, 27L, 28L, 28L, 28L, 28L, 28L, 28L, 255s + 28L, 29L, 29L, 30L, 30L, 30L, 30L, 30L, 30L, 30L, 30L, 30L, 30L, 255s + 31L, 31L, 31L, 32L, 32L, 32L, 32L, 33L, 33L, 33L, 33L, 33L, 33L, 255s + 34L, 34L, 34L, 34L, 34L, 34L, 34L, 35L, 35L, 35L, 36L, 36L, 36L, 255s + 36L, 37L, 37L, 37L, 38L, 38L, 38L, 39L, 39L, 39L, 40L, 40L, 40L, 255s + 41L, 41L, 41L, 41L, 41L, 41L, 41L, 41L, 42L, 42L, 42L, 42L, 42L, 255s + 43L, 43L, 43L, 44L, 44L, 44L, 44L, 44L, 44L, 45L, 45L, 45L, 46L, 255s + 46L, 46L, 46L, 46L, 46L, 46L, 46L, 46L, 47L, 47L, 47L, 48L, 48L, 255s + 48L, 49L, 49L, 49L, 50L, 50L, 50L, 50L, 51L, 51L, 51L, 51L, 51L, 255s + 52L, 52L, 52L, 52L, 53L, 53L, 53L, 53L, 54L, 54L, 54L, 55L, 55L, 255s + 55L, 56L, 56L, 56L, 56L, 57L, 57L, 57L, 57L, 57L, 57L, 58L, 58L, 255s + 58L, 59L, 59L, 59L, 60L, 60L, 60L, 60L, 60L, 60L, 60L, 60L, 60L, 255s + 60L, 60L, 61L, 61L, 61L, 61L, 61L, 61L, 61L, 61L, 62L, 62L, 62L, 255s + 63L, 63L, 63L, 64L, 64L, 64L, 64L, 64L, 64L, 65L, 65L, 65L, 65L, 255s + 66L, 66L, 66L, 66L, 67L, 67L, 67L, 68L, 68L, 68L, 69L, 69L, 69L, 255s + 70L, 70L, 70L, 71L, 71L, 71L, 72L, 72L, 72L, 73L, 73L, 73L, 74L, 255s + 74L, 74L, 75L, 75L, 75L, 75L, 76L, 76L, 76L, 76L, 76L, 76L, 76L, 255s + 76L, 76L, 76L, 76L, 76L, 76L, 76L, 77L, 77L, 77L, 78L, 78L, 78L, 255s + 78L, 78L, 78L, 78L, 78L, 79L, 79L, 79L, 80L, 80L, 80L, 81L, 81L, 255s + 81L, 82L, 82L, 82L, 82L, 82L, 82L, 83L, 83L, 83L, 84L, 84L, 84L, 255s + 84L, 85L, 85L, 85L, 85L, 85L, 86L, 86L, 86L, 87L, 87L, 87L, 87L, 255s + 88L, 88L, 88L, 89L, 89L, 89L, 90L, 90L, 90L, 91L, 91L, 91L, 92L, 255s + 92L, 92L, 92L, 92L, 93L, 93L, 93L, 93L, 93L, 93L, 94L, 94L, 94L, 255s + 95L, 95L, 95L, 96L, 96L, 96L, 97L, 97L, 97L, 97L, 97L, 98L, 98L, 255s + 98L, 99L, 99L, 99L, 100L, 100L, 100L), Dim = c(461L, 101L), Dimnames = list( 255s + NULL, NULL), x = c(1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1), factors = list()) 255s > check.svd(M) 255s Checking 461 x 101 matrix M ... 255s --> approximation error ||M.new - M.ref||_2 = 1.51924e-11 255s > 255s > A <- 255s + new("dgTMatrix", i = c(0L, 586L, 1958L, 18724L, 10404L, 13340L, 255s + 16234L, 6536L, 21785L, 23539L, 3256L, 7242L, 12660L, 18483L, 255s + 19388L, 19824L, 1238L, 1264L, 8787L, 10708L, 13334L, 2867L, 3512L, 255s + 9360L, 10146L, 14287L, 2854L, 5693L, 8646L, 18887L, 21277L, 27422L, 255s + 4632L, 9888L, 16123L, 20780L, 2960L, 8291L, 9771L, 14585L, 15294L, 255s + 22360L, 26L, 2274L, 3930L, 7690L, 10278L, 13269L, 14444L, 16327L, 255s + 17875L, 22552L, 1207L, 2362L, 3174L, 8653L, 10220L, 10754L, 10857L, 255s + 12861L, 23415L, 3957L, 6679L, 8183L, 10870L, 3773L, 4719L, 26559L, 255s + 4030L, 4486L, 7926L, 8245L, 15243L, 20489L, 9551L, 13960L, 18997L, 255s + 2088L, 2785L, 4965L, 7428L, 8762L, 11435L, 15325L, 15451L, 16967L, 255s + 17323L, 17463L, 25040L, 3368L, 12604L, 21330L, 3615L, 4307L, 255s + 5179L, 14429L, 19969L, 8536L, 10618L, 12325L, 366L, 2394L, 3097L, 255s + 3390L, 10377L, 11606L, 19305L, 25620L, 8051L, 9066L, 9831L, 9923L, 255s + 22547L, 1051L, 8000L, 13148L, 13652L, 19134L, 21014L, 23716L, 255s + 974L, 4140L, 10244L, 13758L, 15363L, 17744L, 110L, 1042L, 1435L, 255s + 4802L, 7663L, 11599L, 16531L, 12L, 2158L, 6172L, 9866L, 13125L, 255s + 19941L, 25208L, 833L, 2072L, 3476L, 9408L, 15581L, 21608L, 25886L, 255s + 749L, 5960L, 12348L, 2342L, 6249L, 23087L, 571L, 2737L, 3420L, 255s + 3576L, 7017L, 8423L, 12401L, 10484L, 23110L, 3212L, 4053L, 7013L, 255s + 7037L, 7194L, 7317L, 10532L, 12917L, 20800L, 22803L, 1374L, 5427L, 255s + 9798L, 178L, 870L, 7869L, 21366L, 181L, 6742L, 15435L, 16834L, 255s + 24213L, 25261L, 3080L, 6701L, 8100L, 8146L, 8845L, 15076L, 23227L, 255s + 6650L, 8667L, 14607L, 3860L, 6059L, 9131L, 21934L, 13039L, 19810L, 255s + 21992L, 2797L, 4977L, 8988L, 17456L, 19865L, 23892L, 2225L, 5696L, 255s + 13948L, 3231L, 8849L, 9013L, 9270L, 13351L, 16093L, 16881L, 24362L, 255s + 3151L, 3911L, 4534L, 8259L, 15656L, 872L, 13889L, 14709L, 512L, 255s + 1303L, 3741L, 7837L, 10750L, 24978L, 4937L, 8651L, 14102L, 1116L, 255s + 7309L, 9485L, 9640L, 10828L, 13251L, 18787L, 21060L, 23901L, 255s + 1879L, 4794L, 11817L, 7440L, 10074L, 18425L, 843L, 6710L, 9218L, 255s + 5651L, 10410L, 17733L, 19290L, 7005L, 13985L, 14964L, 17289L, 255s + 23410L, 1548L, 14100L, 20576L, 21875L, 6356L, 10475L, 10712L, 255s + 13594L, 1261L, 10574L, 12727L, 6047L, 11238L, 25105L, 297L, 1903L, 255s + 20711L, 22391L, 605L, 5002L, 12782L, 14991L, 19368L, 23012L, 255s + 3699L, 15108L, 16802L, 268L, 2562L, 6333L, 4668L, 5682L, 5713L, 255s + 6416L, 7499L, 9318L, 10948L, 14649L, 16450L, 19481L, 21282L, 255s + 4788L, 5758L, 5939L, 9983L, 10954L, 13000L, 14198L, 23381L, 1678L, 255s + 4591L, 14577L, 4958L, 11141L, 22168L, 1128L, 1722L, 3619L, 8484L, 255s + 11661L, 13422L, 12412L, 12688L, 19778L, 21264L, 4379L, 4891L, 255s + 6302L, 21571L, 931L, 9252L, 16600L, 6782L, 9204L, 9435L, 6782L, 255s + 9204L, 9435L, 3959L, 16655L, 20200L, 4153L, 18020L, 21108L, 17079L, 255s + 20885L, 20922L, 11384L, 17273L, 25071L, 10100L, 17218L, 20241L, 255s + 4331L, 5925L, 9736L, 17639L, 446L, 2200L, 4603L, 5442L, 8431L, 255s + 8464L, 8566L, 13425L, 13761L, 15026L, 17106L, 18624L, 21649L, 255s + 22001L, 3603L, 4316L, 5073L, 1775L, 1984L, 2414L, 11242L, 12045L, 255s + 13619L, 14769L, 16229L, 1337L, 1844L, 14997L, 11948L, 19464L, 255s + 19777L, 10280L, 22259L, 27458L, 1666L, 4138L, 4406L, 9461L, 12200L, 255s + 16461L, 2339L, 10325L, 25264L, 580L, 1646L, 5412L, 10793L, 3385L, 255s + 11791L, 12875L, 19187L, 25846L, 3749L, 7436L, 16780L, 4107L, 255s + 9793L, 13445L, 14305L, 255L, 3257L, 3674L, 2279L, 5912L, 7777L, 255s + 761L, 1404L, 18184L, 4970L, 12711L, 17107L, 2760L, 9858L, 10187L, 255s + 11794L, 13807L, 2813L, 5403L, 5986L, 6112L, 15382L, 19313L, 5979L, 255s + 9579L, 17654L, 8784L, 14210L, 18958L, 2315L, 8532L, 19996L, 2826L, 255s + 11510L, 18848L, 20043L, 21313L, 10212L, 12304L, 12367L, 6160L, 255s + 7248L, 12897L, 1764L, 16440L, 26230L), j = c(0L, 0L, 0L, 0L, 255s + 1L, 1L, 1L, 2L, 2L, 2L, 3L, 3L, 3L, 3L, 3L, 3L, 4L, 4L, 4L, 4L, 255s + 4L, 5L, 5L, 5L, 5L, 5L, 6L, 6L, 6L, 6L, 6L, 6L, 7L, 7L, 7L, 7L, 255s + 8L, 8L, 8L, 8L, 8L, 8L, 9L, 9L, 9L, 9L, 9L, 9L, 9L, 9L, 9L, 9L, 255s + 10L, 10L, 10L, 10L, 10L, 10L, 10L, 10L, 10L, 11L, 11L, 11L, 11L, 255s + 12L, 12L, 12L, 13L, 13L, 13L, 13L, 13L, 13L, 14L, 14L, 14L, 15L, 255s + 15L, 15L, 15L, 15L, 15L, 15L, 15L, 15L, 15L, 15L, 15L, 16L, 16L, 255s + 16L, 17L, 17L, 17L, 17L, 17L, 18L, 18L, 18L, 19L, 19L, 19L, 19L, 255s + 19L, 19L, 19L, 19L, 20L, 20L, 20L, 20L, 20L, 21L, 21L, 21L, 21L, 255s + 21L, 21L, 21L, 22L, 22L, 22L, 22L, 22L, 22L, 23L, 23L, 23L, 23L, 255s + 23L, 23L, 23L, 24L, 24L, 24L, 24L, 24L, 24L, 24L, 25L, 25L, 25L, 255s + 25L, 25L, 25L, 25L, 26L, 26L, 26L, 27L, 27L, 27L, 28L, 28L, 28L, 255s + 28L, 28L, 28L, 28L, 29L, 29L, 30L, 30L, 30L, 30L, 30L, 30L, 30L, 255s + 30L, 30L, 30L, 31L, 31L, 31L, 32L, 32L, 32L, 32L, 33L, 33L, 33L, 255s + 33L, 33L, 33L, 34L, 34L, 34L, 34L, 34L, 34L, 34L, 35L, 35L, 35L, 255s + 36L, 36L, 36L, 36L, 37L, 37L, 37L, 38L, 38L, 38L, 39L, 39L, 39L, 255s + 40L, 40L, 40L, 41L, 41L, 41L, 41L, 41L, 41L, 41L, 41L, 42L, 42L, 255s + 42L, 42L, 42L, 43L, 43L, 43L, 44L, 44L, 44L, 44L, 44L, 44L, 45L, 255s + 45L, 45L, 46L, 46L, 46L, 46L, 46L, 46L, 46L, 46L, 46L, 47L, 47L, 255s + 47L, 48L, 48L, 48L, 49L, 49L, 49L, 50L, 50L, 50L, 50L, 51L, 51L, 255s + 51L, 51L, 51L, 52L, 52L, 52L, 52L, 53L, 53L, 53L, 53L, 54L, 54L, 255s + 54L, 55L, 55L, 55L, 56L, 56L, 56L, 56L, 57L, 57L, 57L, 57L, 57L, 255s + 57L, 58L, 58L, 58L, 59L, 59L, 59L, 60L, 60L, 60L, 60L, 60L, 60L, 255s + 60L, 60L, 60L, 60L, 60L, 61L, 61L, 61L, 61L, 61L, 61L, 61L, 61L, 255s + 62L, 62L, 62L, 63L, 63L, 63L, 64L, 64L, 64L, 64L, 64L, 64L, 65L, 255s + 65L, 65L, 65L, 66L, 66L, 66L, 66L, 67L, 67L, 67L, 68L, 68L, 68L, 255s + 69L, 69L, 69L, 70L, 70L, 70L, 71L, 71L, 71L, 72L, 72L, 72L, 73L, 255s + 73L, 73L, 74L, 74L, 74L, 75L, 75L, 75L, 75L, 76L, 76L, 76L, 76L, 255s + 76L, 76L, 76L, 76L, 76L, 76L, 76L, 76L, 76L, 76L, 77L, 77L, 77L, 255s + 78L, 78L, 78L, 78L, 78L, 78L, 78L, 78L, 79L, 79L, 79L, 80L, 80L, 255s + 80L, 81L, 81L, 81L, 82L, 82L, 82L, 82L, 82L, 82L, 83L, 83L, 83L, 255s + 84L, 84L, 84L, 84L, 85L, 85L, 85L, 85L, 85L, 86L, 86L, 86L, 87L, 255s + 87L, 87L, 87L, 88L, 88L, 88L, 89L, 89L, 89L, 90L, 90L, 90L, 91L, 255s + 91L, 91L, 92L, 92L, 92L, 92L, 92L, 93L, 93L, 93L, 93L, 93L, 93L, 255s + 94L, 94L, 94L, 95L, 95L, 95L, 96L, 96L, 96L, 97L, 97L, 97L, 97L, 255s + 97L, 98L, 98L, 98L, 99L, 99L, 99L, 100L, 100L, 100L), Dim = c(95474L, 255s + 101L), Dimnames = list(NULL, NULL), x = c(0, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 255s + 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1), factors = list()) 255s > check.svd(A) 255s Checking 95474 x 101 matrix A ... 256s --> approximation error ||M.new - M.ref||_2 = 1.51924e-11 256s > 256s BEGIN TEST stress_test.R 256s 256s R version 4.4.3 (2025-02-28) -- "Trophy Case" 256s Copyright (C) 2025 The R Foundation for Statistical Computing 256s Platform: x86_64-pc-linux-gnu 256s 256s R is free software and comes with ABSOLUTELY NO WARRANTY. 256s You are welcome to redistribute it under certain conditions. 256s Type 'license()' or 'licence()' for distribution details. 256s 256s R is a collaborative project with many contributors. 256s Type 'contributors()' for more information and 256s 'citation()' on how to cite R or R packages in publications. 256s 256s Type 'demo()' for some demos, 'help()' for on-line help, or 256s 'help.start()' for an HTML browser interface to help. 256s Type 'q()' to quit R. 256s 256s > library(Matrix, quietly=TRUE) 257s > library(sparsesvd) 257s > 257s > ## Stress test: 257s > ## - apply sparsesvd() to a large number of random sparse nonnegative matrices 257s > ## - check that original matrix M can be reconstructed with reasonable accuracy 257s > ## - compare truncated SVD against first components of full SVD 257s > 257s > ## Run interactively with: 257s > ## R --slave -f stress_test.R --args 257s > ## (all arguments are optional with default values set below) 257s > argv <- commandArgs(trailingOnly=TRUE) 257s > argc <- length(argv) 257s > 257s > ## arguments and their default values 257s > n.run <- if (argc >= 1) as.integer(argv[1]) else 100 # number of runs 257s > k <- if (argc >= 2) as.integer(argv[2]) else 500 # k = number of rows of M 257s > n <- if (argc >= 3) as.integer(argv[3]) else 100 # n = number of columns of M 257s > r <- if (argc >= 4) as.integer(argv[4]) else 10 # r = rank of truncated SVD 257s > torture <- if (argc >= 5) as.logical(argv[5]) else FALSE # run with gctorture()? 257s > fillrate <- if (argc >= 6) as.numeric(argv[6]) else .10 # fill rate of sparse matrix (10%) 257s > tol <- if (argc >= 7) as.numeric(argv[7]) else 1e-6 # acceptable approx. error per cell 257s > 257s > cat("sparsesvd() Stress Test:\n") 257s sparsesvd() Stress Test: 257s > cat(sprintf(" - %d runs testing full and rank-%d sparse SVD\n", n.run, r)) 257s - 100 runs testing full and rank-10 sparse SVD 257s > cat(sprintf(" - based on %d x %d nonnegative matrix with %.1f%% nonzero cells\n", k, n, 100 * fillrate)) 257s - based on 500 x 100 nonnegative matrix with 10.0% nonzero cells 257s > cat(sprintf(" - reconstruction accuracy < %g, gctorture() is %s\n", tol, if (torture) "ON" else "OFF")) 257s - reconstruction accuracy < 1e-06, gctorture() is OFF 257s > 257s > ## approximate matrix comparison 257s > assert.mat.equal <- function (x, y, tol=1e-6, msg="") { 257s + if (!all(dim(x) == dim(y))) stop(sprintf("error: matrix dimensions differ %s", msg)) 257s + err <- max(abs(x - y)) 257s + if (err > tol) stop(sprintf("approximation error %g > tolerance %g %s", err, tol, msg)) 257s + } 257s > 257s > ## now perform n.run iterations of the test procedure 257s > gctorture(torture) 257s > 257s > pb <- txtProgressBar(min=0, max=n.run, style=3) 257s | | | 0%> for (i in 1:n.run) { 257s + setTxtProgressBar(pb, i) 257s + x <- ifelse(runif(k * n) < fillrate, runif(k * n), 0) 257s + M <- matrix(x, k, n) # random non-negative matrix with specified fill rate 257s + Ms <- Matrix(M, sparse=TRUE) 257s + 257s + ## complete sparse SVD 257s + svdM <- sparsesvd(Ms) 257s + R <- with(svdM, u %*% diag(d) %*% t(v)) # reconstructed matrix 257s + assert.mat.equal(R, M, tol=tol, msg=sprintf("(full SVD at iteration #%d)", i)) 257s + 257s + ## complete sparse SVD of transposed matrix 257s + svdMt <- sparsesvd(t(Ms)) 257s + R <- with(svdMt, v %*% diag(d) %*% t(u)) # reconstructed matrix 257s + assert.mat.equal(R, M, tol=tol, msg=sprintf("(full transposed SVD at iteration #%d)", i)) 257s + 257s + Mr <- with(svdM, u[, 1:r] %*% diag(d[1:r]) %*% t(v[, 1:r])) # r-dimensional approximation 257s + 257s + ## truncated sparse SVD 257s + svdMr <- sparsesvd(Ms, rank=r) 257s + Rr <- with(svdMr, u %*% diag(d) %*% t(v)) # reconstructed r-dim approximation 257s + assert.mat.equal(Rr, Mr, tol=tol, msg=sprintf("(%d-rank truncated SVD at iteration #%d)", r, i)) 257s + 257s + ## truncated sparse SVD of transposed matrix 257s + svdMrt <- sparsesvd(t(Ms), rank=r) 257s + Rr <- with(svdMrt, v %*% diag(d) %*% t(u)) # reconstructed r-dim approximation 257s + assert.mat.equal(Rr, Mr, tol=tol, msg=sprintf("(%d-rank truncated transposed SVD at iteration #%d)", r, i)) 257s + } 262s | |= | 1% | |= | 2% | |== | 3% | |=== | 4% | |==== | 5% | |==== | 6% | |===== | 7% | |====== | 8% | |====== | 9% | |======= | 10% | |======== | 11% | |======== | 12% | |========= | 13% | |========== | 14% | |========== | 15% | |=========== | 16% | |============ | 17% | |============= | 18% | |============= | 19% | |============== | 20% | |=============== | 21% | |=============== | 22% | |================ | 23% | |================= | 24% | |================== | 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|===================================================================== | 99% | |======================================================================| 100%> close(pb) 262s 262s > 263s autopkgtest [22:36:32]: test run-unit-test: -----------------------] 263s autopkgtest [22:36:32]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 263s run-unit-test PASS 264s autopkgtest [22:36:33]: test pkg-r-autopkgtest: preparing testbed 264s Reading package lists... 264s Building dependency tree... 264s Reading state information... 264s Starting pkgProblemResolver with broken count: 0 264s Starting 2 pkgProblemResolver with broken count: 0 264s Done 265s The following NEW packages will be installed: 265s build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu 265s dctrl-tools g++ g++-14 g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc 265s gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-14 265s gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools libasan8 265s libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev 265s libgfortran-14-dev libhwasan0 libicu-dev libisl23 libitm1 libjpeg-dev 265s libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 liblzma-dev libmpc3 265s libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 265s libpkgconf3 libpng-dev libquadmath0 libreadline-dev libstdc++-14-dev 265s libtirpc-dev libtsan2 libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin 265s r-base-dev zlib1g-dev 265s 0 upgraded, 55 newly installed, 0 to remove and 0 not upgraded. 265s Need to get 103 MB of archives. 265s After this operation, 363 MB of additional disk space will be used. 265s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 265s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 265s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [11.9 MB] 266s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-17ubuntu3 [1030 B] 266s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [5586 B] 266s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.2.0-1ubuntu1 [22.4 kB] 266s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 15-20250222-0ubuntu1 [47.0 kB] 266s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 15-20250222-0ubuntu1 [28.6 kB] 266s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 15-20250222-0ubuntu1 [3055 kB] 266s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 15-20250222-0ubuntu1 [1355 kB] 266s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 15-20250222-0ubuntu1 [2756 kB] 267s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 15-20250222-0ubuntu1 [1205 kB] 267s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 15-20250222-0ubuntu1 [1677 kB] 267s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 15-20250222-0ubuntu1 [152 kB] 267s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-17ubuntu3 [2816 kB] 267s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [23.3 MB] 268s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-17ubuntu3 [536 kB] 268s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1208 B] 268s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.2.0-1ubuntu1 [5004 B] 268s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-17ubuntu3 [2486 kB] 268s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [13.4 MB] 269s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-17ubuntu3 [21.8 kB] 269s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [968 B] 269s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.2.0-1ubuntu1 [1100 B] 269s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 269s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 dctrl-tools amd64 2.24-3build3 [106 kB] 269s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran-14-dev amd64 14.2.0-17ubuntu3 [966 kB] 269s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [12.6 MB] 270s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14 amd64 14.2.0-17ubuntu3 [13.6 kB] 270s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1022 B] 270s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran amd64 4:14.2.0-1ubuntu1 [1174 B] 270s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 icu-devtools amd64 76.1-1ubuntu2 [237 kB] 270s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas-dev amd64 3.12.1-2 [338 kB] 270s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libbz2-dev amd64 1.0.8-6 [33.8 kB] 270s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate-dev amd64 1.23-1 [71.7 kB] 270s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libicu-dev amd64 76.1-1ubuntu2 [12.6 MB] 270s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8-dev amd64 2.1.5-3ubuntu2 [324 kB] 270s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 270s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 270s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack-dev amd64 3.12.1-2 [6489 kB] 270s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses-dev amd64 6.5+20250216-2 [424 kB] 270s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.45-1 [268 kB] 270s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-32-0 amd64 10.45-1 [251 kB] 270s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-posix3 amd64 10.45-1 [7204 B] 270s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-dev amd64 10.45-1 [908 kB] 270s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libpkgconf3 amd64 1.8.1-4 [32.3 kB] 270s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 271s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libpng-dev amd64 1.6.47-1 [298 kB] 271s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libreadline-dev amd64 8.2-6 [184 kB] 271s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma-dev amd64 5.6.4-1 [189 kB] 271s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf-bin amd64 1.8.1-4 [21.6 kB] 271s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf amd64 1.8.1-4 [16.8 kB] 271s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3 [193 kB] 271s Get:54 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-dev all 4.4.3-1 [4176 B] 271s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 271s Fetched 103 MB in 6s (17.7 MB/s) 271s Selecting previously unselected package libisl23:amd64. 271s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 79443 files and directories currently installed.) 271s Preparing to unpack .../00-libisl23_0.27-1_amd64.deb ... 271s Unpacking libisl23:amd64 (0.27-1) ... 271s Selecting previously unselected package libmpc3:amd64. 271s Preparing to unpack .../01-libmpc3_1.3.1-1build2_amd64.deb ... 271s Unpacking libmpc3:amd64 (1.3.1-1build2) ... 271s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 271s Preparing to unpack .../02-cpp-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 271s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 271s Selecting previously unselected package cpp-14. 271s Preparing to unpack .../03-cpp-14_14.2.0-17ubuntu3_amd64.deb ... 271s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 271s Selecting previously unselected package cpp-x86-64-linux-gnu. 271s Preparing to unpack .../04-cpp-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 271s Unpacking cpp-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 272s Selecting previously unselected package cpp. 272s Preparing to unpack .../05-cpp_4%3a14.2.0-1ubuntu1_amd64.deb ... 272s Unpacking cpp (4:14.2.0-1ubuntu1) ... 272s Selecting previously unselected package libcc1-0:amd64. 272s Preparing to unpack .../06-libcc1-0_15-20250222-0ubuntu1_amd64.deb ... 272s Unpacking libcc1-0:amd64 (15-20250222-0ubuntu1) ... 272s Selecting previously unselected package libitm1:amd64. 272s Preparing to unpack .../07-libitm1_15-20250222-0ubuntu1_amd64.deb ... 272s Unpacking libitm1:amd64 (15-20250222-0ubuntu1) ... 272s Selecting previously unselected package libasan8:amd64. 272s Preparing to unpack .../08-libasan8_15-20250222-0ubuntu1_amd64.deb ... 272s Unpacking libasan8:amd64 (15-20250222-0ubuntu1) ... 272s Selecting previously unselected package liblsan0:amd64. 272s Preparing to unpack .../09-liblsan0_15-20250222-0ubuntu1_amd64.deb ... 272s Unpacking liblsan0:amd64 (15-20250222-0ubuntu1) ... 272s Selecting previously unselected package libtsan2:amd64. 272s Preparing to unpack .../10-libtsan2_15-20250222-0ubuntu1_amd64.deb ... 272s Unpacking libtsan2:amd64 (15-20250222-0ubuntu1) ... 272s Selecting previously unselected package libubsan1:amd64. 272s Preparing to unpack .../11-libubsan1_15-20250222-0ubuntu1_amd64.deb ... 272s Unpacking libubsan1:amd64 (15-20250222-0ubuntu1) ... 272s Selecting previously unselected package libhwasan0:amd64. 272s Preparing to unpack .../12-libhwasan0_15-20250222-0ubuntu1_amd64.deb ... 272s Unpacking libhwasan0:amd64 (15-20250222-0ubuntu1) ... 272s Selecting previously unselected package libquadmath0:amd64. 272s Preparing to unpack .../13-libquadmath0_15-20250222-0ubuntu1_amd64.deb ... 272s Unpacking libquadmath0:amd64 (15-20250222-0ubuntu1) ... 272s Selecting previously unselected package libgcc-14-dev:amd64. 272s Preparing to unpack .../14-libgcc-14-dev_14.2.0-17ubuntu3_amd64.deb ... 272s Unpacking libgcc-14-dev:amd64 (14.2.0-17ubuntu3) ... 272s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 272s Preparing to unpack .../15-gcc-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 272s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 272s Selecting previously unselected package gcc-14. 272s Preparing to unpack .../16-gcc-14_14.2.0-17ubuntu3_amd64.deb ... 272s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 273s Selecting previously unselected package gcc-x86-64-linux-gnu. 273s Preparing to unpack .../17-gcc-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 273s Unpacking gcc-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 273s Selecting previously unselected package gcc. 273s Preparing to unpack .../18-gcc_4%3a14.2.0-1ubuntu1_amd64.deb ... 273s Unpacking gcc (4:14.2.0-1ubuntu1) ... 273s Selecting previously unselected package libstdc++-14-dev:amd64. 273s Preparing to unpack .../19-libstdc++-14-dev_14.2.0-17ubuntu3_amd64.deb ... 273s Unpacking libstdc++-14-dev:amd64 (14.2.0-17ubuntu3) ... 273s Selecting previously unselected package g++-14-x86-64-linux-gnu. 273s Preparing to unpack .../20-g++-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 273s Unpacking g++-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 273s Selecting previously unselected package g++-14. 273s Preparing to unpack .../21-g++-14_14.2.0-17ubuntu3_amd64.deb ... 273s Unpacking g++-14 (14.2.0-17ubuntu3) ... 273s Selecting previously unselected package g++-x86-64-linux-gnu. 273s Preparing to unpack .../22-g++-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 273s Unpacking g++-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 273s Selecting previously unselected package g++. 273s Preparing to unpack .../23-g++_4%3a14.2.0-1ubuntu1_amd64.deb ... 273s Unpacking g++ (4:14.2.0-1ubuntu1) ... 273s Selecting previously unselected package build-essential. 273s Preparing to unpack .../24-build-essential_12.10ubuntu1_amd64.deb ... 273s Unpacking build-essential (12.10ubuntu1) ... 273s Selecting previously unselected package dctrl-tools. 273s Preparing to unpack .../25-dctrl-tools_2.24-3build3_amd64.deb ... 273s Unpacking dctrl-tools (2.24-3build3) ... 273s Selecting previously unselected package libgfortran-14-dev:amd64. 273s Preparing to unpack .../26-libgfortran-14-dev_14.2.0-17ubuntu3_amd64.deb ... 273s Unpacking libgfortran-14-dev:amd64 (14.2.0-17ubuntu3) ... 273s Selecting previously unselected package gfortran-14-x86-64-linux-gnu. 273s Preparing to unpack .../27-gfortran-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 273s Unpacking gfortran-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 273s Selecting previously unselected package gfortran-14. 273s Preparing to unpack .../28-gfortran-14_14.2.0-17ubuntu3_amd64.deb ... 273s Unpacking gfortran-14 (14.2.0-17ubuntu3) ... 273s Selecting previously unselected package gfortran-x86-64-linux-gnu. 273s Preparing to unpack .../29-gfortran-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 273s Unpacking gfortran-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 274s Selecting previously unselected package gfortran. 274s Preparing to unpack .../30-gfortran_4%3a14.2.0-1ubuntu1_amd64.deb ... 274s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 274s Selecting previously unselected package icu-devtools. 274s Preparing to unpack .../31-icu-devtools_76.1-1ubuntu2_amd64.deb ... 274s Unpacking icu-devtools (76.1-1ubuntu2) ... 274s Selecting previously unselected package libblas-dev:amd64. 274s Preparing to unpack .../32-libblas-dev_3.12.1-2_amd64.deb ... 274s Unpacking libblas-dev:amd64 (3.12.1-2) ... 274s Selecting previously unselected package libbz2-dev:amd64. 274s Preparing to unpack .../33-libbz2-dev_1.0.8-6_amd64.deb ... 274s Unpacking libbz2-dev:amd64 (1.0.8-6) ... 274s Selecting previously unselected package libdeflate-dev:amd64. 274s Preparing to unpack .../34-libdeflate-dev_1.23-1_amd64.deb ... 274s Unpacking libdeflate-dev:amd64 (1.23-1) ... 274s Selecting previously unselected package libicu-dev:amd64. 274s Preparing to unpack .../35-libicu-dev_76.1-1ubuntu2_amd64.deb ... 274s Unpacking libicu-dev:amd64 (76.1-1ubuntu2) ... 274s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 274s Preparing to unpack .../36-libjpeg-turbo8-dev_2.1.5-3ubuntu2_amd64.deb ... 274s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-3ubuntu2) ... 274s Selecting previously unselected package libjpeg8-dev:amd64. 274s Preparing to unpack .../37-libjpeg8-dev_8c-2ubuntu11_amd64.deb ... 274s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu11) ... 274s Selecting previously unselected package libjpeg-dev:amd64. 274s Preparing to unpack .../38-libjpeg-dev_8c-2ubuntu11_amd64.deb ... 274s Unpacking libjpeg-dev:amd64 (8c-2ubuntu11) ... 274s Selecting previously unselected package liblapack-dev:amd64. 274s Preparing to unpack .../39-liblapack-dev_3.12.1-2_amd64.deb ... 274s Unpacking liblapack-dev:amd64 (3.12.1-2) ... 274s Selecting previously unselected package libncurses-dev:amd64. 274s Preparing to unpack .../40-libncurses-dev_6.5+20250216-2_amd64.deb ... 274s Unpacking libncurses-dev:amd64 (6.5+20250216-2) ... 274s Selecting previously unselected package libpcre2-16-0:amd64. 274s Preparing to unpack .../41-libpcre2-16-0_10.45-1_amd64.deb ... 274s Unpacking libpcre2-16-0:amd64 (10.45-1) ... 274s Selecting previously unselected package libpcre2-32-0:amd64. 274s Preparing to unpack .../42-libpcre2-32-0_10.45-1_amd64.deb ... 274s Unpacking libpcre2-32-0:amd64 (10.45-1) ... 274s Selecting previously unselected package libpcre2-posix3:amd64. 274s Preparing to unpack .../43-libpcre2-posix3_10.45-1_amd64.deb ... 274s Unpacking libpcre2-posix3:amd64 (10.45-1) ... 274s Selecting previously unselected package libpcre2-dev:amd64. 274s Preparing to unpack .../44-libpcre2-dev_10.45-1_amd64.deb ... 274s Unpacking libpcre2-dev:amd64 (10.45-1) ... 274s Selecting previously unselected package libpkgconf3:amd64. 274s Preparing to unpack .../45-libpkgconf3_1.8.1-4_amd64.deb ... 274s Unpacking libpkgconf3:amd64 (1.8.1-4) ... 274s Selecting previously unselected package zlib1g-dev:amd64. 274s Preparing to unpack .../46-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ... 274s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 275s Selecting previously unselected package libpng-dev:amd64. 275s Preparing to unpack .../47-libpng-dev_1.6.47-1_amd64.deb ... 275s Unpacking libpng-dev:amd64 (1.6.47-1) ... 275s Selecting previously unselected package libreadline-dev:amd64. 275s Preparing to unpack .../48-libreadline-dev_8.2-6_amd64.deb ... 275s Unpacking libreadline-dev:amd64 (8.2-6) ... 275s Selecting previously unselected package liblzma-dev:amd64. 275s Preparing to unpack .../49-liblzma-dev_5.6.4-1_amd64.deb ... 275s Unpacking liblzma-dev:amd64 (5.6.4-1) ... 275s Selecting previously unselected package pkgconf-bin. 275s Preparing to unpack .../50-pkgconf-bin_1.8.1-4_amd64.deb ... 275s Unpacking pkgconf-bin (1.8.1-4) ... 275s Selecting previously unselected package pkgconf:amd64. 275s Preparing to unpack .../51-pkgconf_1.8.1-4_amd64.deb ... 275s Unpacking pkgconf:amd64 (1.8.1-4) ... 275s Selecting previously unselected package libtirpc-dev:amd64. 275s Preparing to unpack .../52-libtirpc-dev_1.3.4+ds-1.3_amd64.deb ... 275s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1.3) ... 275s Selecting previously unselected package r-base-dev. 275s Preparing to unpack .../53-r-base-dev_4.4.3-1_all.deb ... 275s Unpacking r-base-dev (4.4.3-1) ... 275s Selecting previously unselected package pkg-r-autopkgtest. 275s Preparing to unpack .../54-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 275s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 275s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-3ubuntu2) ... 275s Setting up libncurses-dev:amd64 (6.5+20250216-2) ... 275s Setting up libreadline-dev:amd64 (8.2-6) ... 275s Setting up libpcre2-16-0:amd64 (10.45-1) ... 275s Setting up libpcre2-32-0:amd64 (10.45-1) ... 275s Setting up libtirpc-dev:amd64 (1.3.4+ds-1.3) ... 275s Setting up libpkgconf3:amd64 (1.8.1-4) ... 275s Setting up libquadmath0:amd64 (15-20250222-0ubuntu1) ... 275s Setting up libmpc3:amd64 (1.3.1-1build2) ... 275s Setting up icu-devtools (76.1-1ubuntu2) ... 275s Setting up pkgconf-bin (1.8.1-4) ... 275s Setting up liblzma-dev:amd64 (5.6.4-1) ... 275s Setting up libubsan1:amd64 (15-20250222-0ubuntu1) ... 275s Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 275s Setting up libpcre2-posix3:amd64 (10.45-1) ... 275s Setting up libhwasan0:amd64 (15-20250222-0ubuntu1) ... 275s Setting up libasan8:amd64 (15-20250222-0ubuntu1) ... 275s Setting up libtsan2:amd64 (15-20250222-0ubuntu1) ... 275s Setting up libjpeg8-dev:amd64 (8c-2ubuntu11) ... 275s Setting up libisl23:amd64 (0.27-1) ... 275s Setting up libdeflate-dev:amd64 (1.23-1) ... 275s Setting up libicu-dev:amd64 (76.1-1ubuntu2) ... 275s Setting up libcc1-0:amd64 (15-20250222-0ubuntu1) ... 275s Setting up liblsan0:amd64 (15-20250222-0ubuntu1) ... 275s Setting up libblas-dev:amd64 (3.12.1-2) ... 275s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode 275s Setting up dctrl-tools (2.24-3build3) ... 275s Setting up libitm1:amd64 (15-20250222-0ubuntu1) ... 275s Setting up libbz2-dev:amd64 (1.0.8-6) ... 275s Setting up libpcre2-dev:amd64 (10.45-1) ... 275s Setting up libpng-dev:amd64 (1.6.47-1) ... 275s Setting up libjpeg-dev:amd64 (8c-2ubuntu11) ... 275s Setting up pkgconf:amd64 (1.8.1-4) ... 275s Setting up liblapack-dev:amd64 (3.12.1-2) ... 275s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode 275s Setting up cpp-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 275s Setting up cpp-14 (14.2.0-17ubuntu3) ... 275s Setting up libgcc-14-dev:amd64 (14.2.0-17ubuntu3) ... 275s Setting up libstdc++-14-dev:amd64 (14.2.0-17ubuntu3) ... 275s Setting up cpp-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 275s Setting up libgfortran-14-dev:amd64 (14.2.0-17ubuntu3) ... 275s Setting up cpp (4:14.2.0-1ubuntu1) ... 275s Setting up gcc-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 275s Setting up gcc-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 275s Setting up gcc-14 (14.2.0-17ubuntu3) ... 275s Setting up gfortran-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 275s Setting up g++-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 275s Setting up g++-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 275s Setting up g++-14 (14.2.0-17ubuntu3) ... 275s Setting up gfortran-14 (14.2.0-17ubuntu3) ... 275s Setting up gfortran-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 275s Setting up gcc (4:14.2.0-1ubuntu1) ... 275s Setting up g++ (4:14.2.0-1ubuntu1) ... 275s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 275s Setting up build-essential (12.10ubuntu1) ... 275s Setting up gfortran (4:14.2.0-1ubuntu1) ... 275s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 275s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 275s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 275s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 275s Setting up r-base-dev (4.4.3-1) ... 275s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 275s Processing triggers for libc-bin (2.41-1ubuntu2) ... 275s Processing triggers for man-db (2.13.0-1) ... 276s Processing triggers for install-info (7.1.1-1) ... 277s autopkgtest [22:36:46]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 277s autopkgtest [22:36:46]: test pkg-r-autopkgtest: [----------------------- 277s Test: Try to load the R library sparsesvd 277s 277s R version 4.4.3 (2025-02-28) -- "Trophy Case" 277s Copyright (C) 2025 The R Foundation for Statistical Computing 277s Platform: x86_64-pc-linux-gnu 277s 277s R is free software and comes with ABSOLUTELY NO WARRANTY. 277s You are welcome to redistribute it under certain conditions. 277s Type 'license()' or 'licence()' for distribution details. 277s 277s R is a collaborative project with many contributors. 277s Type 'contributors()' for more information and 277s 'citation()' on how to cite R or R packages in publications. 277s 277s Type 'demo()' for some demos, 'help()' for on-line help, or 277s 'help.start()' for an HTML browser interface to help. 277s Type 'q()' to quit R. 277s 278s > library('sparsesvd') 278s > 278s > 278s Other tests are currently unsupported! 278s They will be progressively added. 279s autopkgtest [22:36:48]: test pkg-r-autopkgtest: -----------------------] 279s autopkgtest [22:36:48]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 279s pkg-r-autopkgtest PASS 280s autopkgtest [22:36:49]: @@@@@@@@@@@@@@@@@@@@ summary 280s run-unit-test PASS 280s pkg-r-autopkgtest PASS 298s nova [W] Skipping flock for amd64 298s Creating nova instance adt-plucky-amd64-r-cran-sparsesvd-20250315-223209-juju-7f2275-prod-proposed-migration-environment-2-24abc56d-41b1-420b-b1b3-194210082990 from image adt/ubuntu-plucky-amd64-server-20250304.img (UUID 9c7d4da5-d95f-4c85-ac1f-51eb37e75c4c)... 298s nova [W] Timed out waiting for 01d35d5e-5d2e-4c09-afd8-b00d0771779f to get deleted.