0s autopkgtest [20:49:24]: starting date and time: 2024-11-23 20:49:24+0000
  0s autopkgtest [20:49:24]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky
  0s autopkgtest [20:49:24]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.6i7b9s3n/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-spacetime --apt-upgrade r-cran-spacetime --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-spacetime/1.3-2-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-1.secgroup --name adt-plucky-amd64-r-cran-spacetime-20241123-204924-juju-7f2275-prod-proposed-migration-environment-20-81913f36-6889-468c-ab09-ad4e0be410bf --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
 38s autopkgtest [20:50:02]: testbed dpkg architecture: amd64
 39s autopkgtest [20:50:02]: testbed apt version: 2.9.8
 39s autopkgtest [20:50:02]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 39s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB]
 39s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [13.6 kB]
 39s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [925 kB]
 39s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [53.2 kB]
 39s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9704 B]
 39s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [89.4 kB]
 39s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [41.5 kB]
 39s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [40.1 kB]
 39s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/restricted i386 Packages [2408 B]
 39s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [800 kB]
 39s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [290 kB]
 39s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [5528 B]
 39s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [20.0 kB]
 40s Fetched 2364 kB in 1s (2890 kB/s)
 40s Reading package lists...
 42s Reading package lists...
 42s Building dependency tree...
 42s Reading state information...
 42s Calculating upgrade...
 42s The following package was automatically installed and is no longer required:
 42s   libsgutils2-1.46-2
 42s Use 'sudo apt autoremove' to remove it.
 42s The following NEW packages will be installed:
 42s   libsgutils2-1.48
 42s The following packages will be upgraded:
 42s   amd64-microcode bash bpftrace curl debconf debconf-i18n distro-info
 42s   dracut-install fwupd-signed gir1.2-girepository-2.0 gir1.2-glib-2.0 hostname
 42s   intel-microcode libaudit-common libaudit1 libcurl3t64-gnutls libcurl4t64
 42s   libgirepository-1.0-1 libglib2.0-0t64 libglib2.0-data libpam-modules
 42s   libpam-modules-bin libpam-runtime libpam0g libplymouth5 libselinux1
 43s   libsemanage-common libsemanage2 linux-base lxd-installer openssh-client
 43s   openssh-server openssh-sftp-server pinentry-curses plymouth
 43s   plymouth-theme-ubuntu-text python3-blinker python3-dbus python3-debconf
 43s   python3-gi python3-jsonschema-specifications python3-rpds-py python3-yaml
 43s   sg3-utils sg3-utils-udev vim-common vim-tiny xxd
 43s 48 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
 43s Need to get 19.9 MB of archives.
 43s After this operation, 4454 kB of additional disk space will be used.
 43s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 bash amd64 5.2.32-1ubuntu2 [918 kB]
 43s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 hostname amd64 3.25 [11.1 kB]
 43s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit-common all 1:4.0.2-2ubuntu1 [6578 B]
 43s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit1 amd64 1:4.0.2-2ubuntu1 [53.9 kB]
 43s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 debconf-i18n all 1.5.87ubuntu1 [204 kB]
 43s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-debconf all 1.5.87ubuntu1 [4156 B]
 43s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 debconf all 1.5.87ubuntu1 [124 kB]
 43s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam0g amd64 1.5.3-7ubuntu4 [69.6 kB]
 43s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libselinux1 amd64 3.7-3ubuntu1 [86.9 kB]
 43s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-modules-bin amd64 1.5.3-7ubuntu4 [53.7 kB]
 43s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-modules amd64 1.5.3-7ubuntu4 [294 kB]
 43s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-sftp-server amd64 1:9.9p1-3ubuntu2 [41.2 kB]
 43s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-server amd64 1:9.9p1-3ubuntu2 [625 kB]
 43s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-client amd64 1:9.9p1-3ubuntu2 [1080 kB]
 43s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-runtime all 1.5.3-7ubuntu4 [40.8 kB]
 43s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage-common all 3.7-2build1 [7186 B]
 43s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage2 amd64 3.7-2build1 [105 kB]
 43s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 distro-info amd64 1.12 [20.0 kB]
 43s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-girepository-2.0 amd64 1.82.0-2 [25.3 kB]
 43s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-glib-2.0 amd64 2.82.2-3 [182 kB]
 43s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-0t64 amd64 2.82.2-3 [1655 kB]
 43s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libgirepository-1.0-1 amd64 1.82.0-2 [88.7 kB]
 43s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-data all 2.82.2-3 [51.7 kB]
 43s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dbus amd64 1.3.2-5build4 [110 kB]
 43s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-3build1 [293 kB]
 43s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-yaml amd64 6.0.2-1build1 [187 kB]
 43s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 vim-tiny amd64 2:9.1.0861-1ubuntu1 [1037 kB]
 43s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 vim-common all 2:9.1.0861-1ubuntu1 [395 kB]
 43s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 xxd amd64 2:9.1.0861-1ubuntu1 [67.8 kB]
 43s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libplymouth5 amd64 24.004.60-2ubuntu3 [145 kB]
 43s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 plymouth-theme-ubuntu-text amd64 24.004.60-2ubuntu3 [10.3 kB]
 43s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 plymouth amd64 24.004.60-2ubuntu3 [140 kB]
 43s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 bpftrace amd64 0.21.2-2ubuntu3 [1787 kB]
 44s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 curl amd64 8.9.1-2ubuntu3 [243 kB]
 44s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4t64 amd64 8.9.1-2ubuntu3 [420 kB]
 44s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 dracut-install amd64 105-2ubuntu2 [35.9 kB]
 44s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 fwupd-signed amd64 1.55+1.7-1 [30.6 kB]
 44s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl3t64-gnutls amd64 8.9.1-2ubuntu3 [412 kB]
 44s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libsgutils2-1.48 amd64 1.48-0ubuntu1 [124 kB]
 44s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-base all 4.10.1ubuntu1 [34.8 kB]
 44s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 lxd-installer all 10 [5264 B]
 44s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 pinentry-curses amd64 1.3.1-0ubuntu2 [41.6 kB]
 44s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-blinker all 1.9.0-1 [10.7 kB]
 44s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-rpds-py amd64 0.21.0-2ubuntu1 [323 kB]
 44s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jsonschema-specifications all 2023.12.1-2 [9116 B]
 44s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 sg3-utils amd64 1.48-0ubuntu1 [1042 kB]
 44s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 sg3-utils-udev all 1.48-0ubuntu1 [6608 B]
 44s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 amd64-microcode amd64 3.20240820.1ubuntu1 [187 kB]
 44s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 intel-microcode amd64 3.20241112.1ubuntu2 [7055 kB]
 44s Preconfiguring packages ...
 44s Fetched 19.9 MB in 1s (14.2 MB/s)
 45s (Reading database ... 
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 45s Preparing to unpack .../bash_5.2.32-1ubuntu2_amd64.deb ...
 45s Unpacking bash (5.2.32-1ubuntu2) over (5.2.32-1ubuntu1) ...
 45s Setting up bash (5.2.32-1ubuntu2) ...
 45s update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode
 45s (Reading database ... 
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 45s Preparing to unpack .../hostname_3.25_amd64.deb ...
 45s Unpacking hostname (3.25) over (3.23+nmu2ubuntu2) ...
 45s Setting up hostname (3.25) ...
 45s (Reading database ... 
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 45s Preparing to unpack .../libaudit-common_1%3a4.0.2-2ubuntu1_all.deb ...
 45s Unpacking libaudit-common (1:4.0.2-2ubuntu1) over (1:4.0.1-1ubuntu2) ...
 45s Setting up libaudit-common (1:4.0.2-2ubuntu1) ...
 45s (Reading database ... 
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 45s Preparing to unpack .../libaudit1_1%3a4.0.2-2ubuntu1_amd64.deb ...
 45s Unpacking libaudit1:amd64 (1:4.0.2-2ubuntu1) over (1:4.0.1-1ubuntu2) ...
 45s Setting up libaudit1:amd64 (1:4.0.2-2ubuntu1) ...
 45s (Reading database ... 
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 45s Preparing to unpack .../debconf-i18n_1.5.87ubuntu1_all.deb ...
 45s Unpacking debconf-i18n (1.5.87ubuntu1) over (1.5.86ubuntu1) ...
 45s Preparing to unpack .../python3-debconf_1.5.87ubuntu1_all.deb ...
 45s Unpacking python3-debconf (1.5.87ubuntu1) over (1.5.86ubuntu1) ...
 45s Preparing to unpack .../debconf_1.5.87ubuntu1_all.deb ...
 45s Unpacking debconf (1.5.87ubuntu1) over (1.5.86ubuntu1) ...
 45s Setting up debconf (1.5.87ubuntu1) ...
 45s (Reading database ... 
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 45s Preparing to unpack .../libpam0g_1.5.3-7ubuntu4_amd64.deb ...
 45s Unpacking libpam0g:amd64 (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ...
 45s Setting up libpam0g:amd64 (1.5.3-7ubuntu4) ...
 46s (Reading database ... 
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 46s Preparing to unpack .../libselinux1_3.7-3ubuntu1_amd64.deb ...
 46s Unpacking libselinux1:amd64 (3.7-3ubuntu1) over (3.5-2ubuntu5) ...
 46s Setting up libselinux1:amd64 (3.7-3ubuntu1) ...
 46s (Reading database ... 
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 46s Preparing to unpack .../libpam-modules-bin_1.5.3-7ubuntu4_amd64.deb ...
 46s Unpacking libpam-modules-bin (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ...
 46s Setting up libpam-modules-bin (1.5.3-7ubuntu4) ...
 47s pam_namespace.service is a disabled or a static unit not running, not starting it.
 47s (Reading database ... 
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 47s Preparing to unpack .../libpam-modules_1.5.3-7ubuntu4_amd64.deb ...
 47s Unpacking libpam-modules:amd64 (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ...
 47s Setting up libpam-modules:amd64 (1.5.3-7ubuntu4) ...
 47s (Reading database ... 
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 47s Preparing to unpack .../openssh-sftp-server_1%3a9.9p1-3ubuntu2_amd64.deb ...
 47s Unpacking openssh-sftp-server (1:9.9p1-3ubuntu2) over (1:9.7p1-7ubuntu5) ...
 47s Preparing to unpack .../openssh-server_1%3a9.9p1-3ubuntu2_amd64.deb ...
 47s Unpacking openssh-server (1:9.9p1-3ubuntu2) over (1:9.7p1-7ubuntu5) ...
 47s Preparing to unpack .../openssh-client_1%3a9.9p1-3ubuntu2_amd64.deb ...
 47s Unpacking openssh-client (1:9.9p1-3ubuntu2) over (1:9.7p1-7ubuntu5) ...
 47s Preparing to unpack .../libpam-runtime_1.5.3-7ubuntu4_all.deb ...
 47s Unpacking libpam-runtime (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ...
 47s Setting up libpam-runtime (1.5.3-7ubuntu4) ...
 47s (Reading database ... 
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 47s Preparing to unpack .../libsemanage-common_3.7-2build1_all.deb ...
 47s Unpacking libsemanage-common (3.7-2build1) over (3.5-1build6) ...
 47s Setting up libsemanage-common (3.7-2build1) ...
 47s (Reading database ... 
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 47s Preparing to unpack .../libsemanage2_3.7-2build1_amd64.deb ...
 47s Unpacking libsemanage2:amd64 (3.7-2build1) over (3.5-1build6) ...
 47s Setting up libsemanage2:amd64 (3.7-2build1) ...
 47s (Reading database ... 
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 47s Preparing to unpack .../00-distro-info_1.12_amd64.deb ...
 47s Unpacking distro-info (1.12) over (1.9) ...
 47s Preparing to unpack .../01-gir1.2-girepository-2.0_1.82.0-2_amd64.deb ...
 47s Unpacking gir1.2-girepository-2.0:amd64 (1.82.0-2) over (1.80.1-4) ...
 47s Preparing to unpack .../02-gir1.2-glib-2.0_2.82.2-3_amd64.deb ...
 47s Unpacking gir1.2-glib-2.0:amd64 (2.82.2-3) over (2.82.1-0ubuntu1) ...
 47s Preparing to unpack .../03-libglib2.0-0t64_2.82.2-3_amd64.deb ...
 47s Unpacking libglib2.0-0t64:amd64 (2.82.2-3) over (2.82.1-0ubuntu1) ...
 47s Preparing to unpack .../04-libgirepository-1.0-1_1.82.0-2_amd64.deb ...
 47s Unpacking libgirepository-1.0-1:amd64 (1.82.0-2) over (1.80.1-4) ...
 47s Preparing to unpack .../05-libglib2.0-data_2.82.2-3_all.deb ...
 47s Unpacking libglib2.0-data (2.82.2-3) over (2.82.1-0ubuntu1) ...
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 48s Preparing to unpack .../27-python3-jsonschema-specifications_2023.12.1-2_all.deb ...
 48s Unpacking python3-jsonschema-specifications (2023.12.1-2) over (2023.12.1-1ubuntu1) ...
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 49s intel-microcode: microcode will be updated at next boot
 49s Setting up python3-debconf (1.5.87ubuntu1) ...
 49s Setting up libcurl3t64-gnutls:amd64 (8.9.1-2ubuntu3) ...
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 49s Setting up python3-yaml (6.0.2-1build1) ...
 49s Setting up debconf-i18n (1.5.87ubuntu1) ...
 49s Setting up amd64-microcode (3.20240820.1ubuntu1) ...
 49s amd64-microcode: microcode will be updated at next boot
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 49s Setting up libglib2.0-0t64:amd64 (2.82.2-3) ...
 49s No schema files found: doing nothing.
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 49s Setting up libplymouth5:amd64 (24.004.60-2ubuntu3) ...
 49s Setting up libgirepository-1.0-1:amd64 (1.82.0-2) ...
 49s Setting up curl (8.9.1-2ubuntu3) ...
 49s Setting up python3-jsonschema-specifications (2023.12.1-2) ...
 49s Setting up sg3-utils (1.48-0ubuntu1) ...
 49s Setting up python3-blinker (1.9.0-1) ...
 50s Setting up openssh-sftp-server (1:9.9p1-3ubuntu2) ...
 50s Setting up python3-dbus (1.3.2-5build4) ...
 50s Setting up openssh-server (1:9.9p1-3ubuntu2) ...
 50s Installing new version of config file /etc/ssh/moduli ...
 50s Replacing config file /etc/ssh/sshd_config with new version
 51s Setting up plymouth (24.004.60-2ubuntu3) ...
 51s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic
 51s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
 58s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
 58s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
 59s Setting up vim-tiny (2:9.1.0861-1ubuntu1) ...
 59s Setting up sg3-utils-udev (1.48-0ubuntu1) ...
 59s update-initramfs: deferring update (trigger activated)
 59s Setting up plymouth-theme-ubuntu-text (24.004.60-2ubuntu3) ...
 59s update-initramfs: deferring update (trigger activated)
 59s Setting up gir1.2-girepository-2.0:amd64 (1.82.0-2) ...
 59s Setting up python3-gi (3.50.0-3build1) ...
 59s Processing triggers for install-info (7.1.1-1) ...
 59s Processing triggers for initramfs-tools (0.142ubuntu35) ...
 59s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic
 59s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
 66s Processing triggers for libc-bin (2.40-1ubuntu3) ...
 66s Processing triggers for ufw (0.36.2-8) ...
 66s Processing triggers for man-db (2.13.0-1) ...
 68s Processing triggers for debianutils (5.21) ...
 68s Reading package lists...
 68s Building dependency tree...
 68s Reading state information...
 68s The following packages will be REMOVED:
 68s   libsgutils2-1.46-2*
 68s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded.
 68s After this operation, 294 kB disk space will be freed.
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 68s Removing libsgutils2-1.46-2:amd64 (1.46-3ubuntu5) ...
 68s Processing triggers for libc-bin (2.40-1ubuntu3) ...
 69s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease
 69s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
 69s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
 69s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
 70s Reading package lists...
 70s Reading package lists...
 70s Building dependency tree...
 70s Reading state information...
 70s Calculating upgrade...
 70s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 70s Reading package lists...
 71s Building dependency tree...
 71s Reading state information...
 71s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 71s autopkgtest [20:50:35]: rebooting testbed after setup commands that affected boot
 88s autopkgtest [20:50:52]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 13:41:20 UTC 2024
 92s autopkgtest [20:50:56]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-spacetime
 94s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-spacetime 1.3-2-1 (dsc) [2400 B]
 94s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-spacetime 1.3-2-1 (tar) [2319 kB]
 94s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-spacetime 1.3-2-1 (diff) [3240 B]
 94s gpgv: Signature made Tue Oct  1 00:22:51 2024 UTC
 94s gpgv:                using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502
 94s gpgv:                issuer "plessy@debian.org"
 94s gpgv: Can't check signature: No public key
 94s dpkg-source: warning: cannot verify inline signature for ./r-cran-spacetime_1.3-2-1.dsc: no acceptable signature found
 94s autopkgtest [20:50:58]: testing package r-cran-spacetime version 1.3-2-1
 94s autopkgtest [20:50:58]: build not needed
 98s autopkgtest [20:51:02]: test run-unit-test: preparing testbed
 99s Reading package lists...
100s Building dependency tree...
100s Reading state information...
100s Starting pkgProblemResolver with broken count: 0
100s Starting 2 pkgProblemResolver with broken count: 0
100s Done
100s The following additional packages will be installed:
100s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
100s   fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax gdal-data
100s   gdal-plugins javascript-common libaec0 libaom3 libarmadillo14 libarpack2t64
100s   libblas3 libblosc1 libcairo2 libcfitsio10t64 libdatrie1 libde265-0
100s   libdeflate0 libfontconfig1 libfreexl1 libfyba0t64 libgdal35 libgeos-c1t64
100s   libgeos3.13.0 libgeotiff5 libgfortran5 libgif7 libgomp1 libgpgmepp6t64
100s   libgraphite2-3 libharfbuzz0b libhdf4-0-alt libhdf5-103-1t64
100s   libhdf5-hl-100t64 libheif-plugin-aomdec libheif-plugin-libde265 libheif1
100s   libice6 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-bootstrap4
100s   libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery
100s   libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json
100s   libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js
100s   libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker
100s   libkmlbase1t64 libkmldom1t64 libkmlengine1t64 liblapack3 liblcms2-2 liblerc4
100s   libltdl7 liblua5.4-0 libminizip1t64 libmysqlclient21 libnetcdf19t64 libodbc2
100s   libodbcinst2 libogdi4.1 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0
100s   libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libpoppler140
100s   libpq5 libproj25 libqhull-r8.0 librttopo1 libsharpyuv0 libsm6 libsnappy1v5
100s   libspatialite8t64 libsz2 libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6
100s   libudunits2-0 libudunits2-data liburiparser1 libwebp7 libxcb-render0
100s   libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1 libxt6t64 littler
100s   mysql-common node-bootstrap-sass node-html5shiv node-normalize.css pandoc
100s   pandoc-data proj-data r-base-core r-cran-abind r-cran-base64enc
100s   r-cran-bdsmatrix r-cran-bslib r-cran-cachem r-cran-class r-cran-classint
100s   r-cran-cli r-cran-collapse r-cran-commonmark r-cran-crayon r-cran-dbi
100s   r-cran-digest r-cran-e1071 r-cran-evaluate r-cran-fastmap r-cran-fnn
100s   r-cran-fontawesome r-cran-foreign r-cran-formula r-cran-fs r-cran-generics
100s   r-cran-glue r-cran-gstat r-cran-highr r-cran-htmltools r-cran-httpuv
100s   r-cran-intervals r-cran-isocodes r-cran-jquerylib r-cran-jsonlite
100s   r-cran-kernsmooth r-cran-knitr r-cran-later r-cran-lattice r-cran-lifecycle
100s   r-cran-littler r-cran-lmtest r-cran-magrittr r-cran-mapdata r-cran-maps
100s   r-cran-markdown r-cran-mass r-cran-maxlik r-cran-memoise r-cran-mime
100s   r-cran-misctools r-cran-nlme r-cran-pkgkitten r-cran-plm r-cran-promises
100s   r-cran-proxy r-cran-r6 r-cran-rappdirs r-cran-raster r-cran-rbibutils
100s   r-cran-rcolorbrewer r-cran-rcpp r-cran-rdpack r-cran-rlang r-cran-rmarkdown
100s   r-cran-rpostgresql r-cran-s2 r-cran-sandwich r-cran-sass r-cran-sf
100s   r-cran-sftime r-cran-shiny r-cran-sourcetools r-cran-sp r-cran-spacetime
100s   r-cran-stars r-cran-terra r-cran-tinytex r-cran-units r-cran-withr r-cran-wk
100s   r-cran-xfun r-cran-xtable r-cran-xts r-cran-yaml r-cran-zoo unixodbc-common
100s   unzip x11-common xdg-utils zip
100s Suggested packages:
100s   apache2 | lighttpd | httpd geotiff-bin gdal-bin libgeotiff-epsg
100s   libhdf4-alt-dev hdf4-tools libheif-plugin-x265 libheif-plugin-ffmpegdec
100s   libheif-plugin-jpegdec libheif-plugin-jpegenc libheif-plugin-j2kdec
100s   libheif-plugin-j2kenc libheif-plugin-kvazaar libheif-plugin-rav1e
100s   libheif-plugin-svtenc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix
100s   libjs-mathjax-doc liblcms2-utils odbc-postgresql tdsodbc ogdi-bin proj-bin
100s   tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex
100s   pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff
100s   ghc php python ruby libjs-katex citation-style-language-styles elpa-ess
100s   r-doc-info | r-doc-pdf r-mathlib r-base-html r-cran-rstudioapi r-cran-rmysql
100s   r-cran-mvtnorm r-cran-covr r-cran-tibble r-cran-testthat r-cran-getopt
100s   r-cran-mapproj r-cran-httr r-cran-roxygen2 r-cran-inline r-cran-survival
100s Recommended packages:
100s   proj-bin libheif-plugin-aomenc node-jquery poppler-data r-recommended
100s   r-base-dev r-doc-html r-cran-curl r-cran-future r-cran-ggplot2
100s   r-cran-testthat r-cran-thematic r-cran-spdata r-cran-tinytest r-cran-callr
100s   r-cran-covr r-cran-htmlwidgets r-cran-mockery r-cran-processx r-cran-ps
100s   r-cran-rprojroot r-cran-rstudioapi r-cran-tibble r-cran-whoami
100s   r-cran-data.table r-cran-rcpparmadillo r-cran-rcppeigen r-cran-dplyr
100s   r-cran-scales r-cran-microbenchmark r-cran-xml2 r-cran-rsvg r-cran-pillar
100s   r-cran-spelling r-cran-vctrs r-cran-pkgload r-cran-rsqlite r-cran-waldo
100s   r-cran-fields r-cran-future.apply r-cran-testit r-cran-cairo r-cran-ragg
100s   r-cran-httr r-cran-r.rsp r-cran-codetools r-cran-formatr r-cran-gridsvg
100s   r-cran-jpeg r-cran-magick r-cran-png r-cran-reticulate r-cran-rgl
100s   r-cran-tikzdevice r-cran-webshot r-cran-svglite node-highlight.js
100s   r-cran-lintr r-cran-tidyverse r-cran-rcurl r-cran-clue r-cran-plot3d
100s   r-cran-runit r-cran-aer r-cran-car r-cran-spdep r-cran-statmod r-cran-urca
100s   r-cran-bookdown r-cran-purrr r-cran-cba r-cran-ncdf4 r-cran-igraph
100s   r-cran-exactextractr r-cran-gbrd r-cran-usethis r-cran-dygraphs
100s   r-cran-rsconnect r-cran-downlit r-cran-bit64 r-cran-blob r-cran-nanoarrow
100s   r-cran-lwgeom r-cran-matrix r-cran-pbapply r-cran-spatstat
100s   r-cran-spatstat.geom r-cran-spatstat.random r-cran-spatstat.linnet
100s   r-cran-spatstat.utils r-cran-tidyr r-cran-tidyselect r-cran-ncmeta r-cran-dt
100s   r-cran-deldir r-cran-pcict r-cran-rnetcdf r-cran-cubelyr r-cran-ggforce
100s   r-cran-ggthemes r-cran-ncdfgeom r-cran-randomforest r-cran-viridis
100s   r-cran-xml r-cran-vdiffr r-cran-readr r-cran-remotes r-cran-renv
100s   r-cran-timeseries r-cran-timedate r-cran-tseries r-cran-chron
100s   libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
100s   x11-xserver-utils
100s The following NEW packages will be installed:
100s   autopkgtest-satdep fontconfig fontconfig-config fonts-dejavu-core
100s   fonts-dejavu-mono fonts-font-awesome fonts-glyphicons-halflings
100s   fonts-mathjax gdal-data gdal-plugins javascript-common libaec0 libaom3
100s   libarmadillo14 libarpack2t64 libblas3 libblosc1 libcairo2 libcfitsio10t64
100s   libdatrie1 libde265-0 libdeflate0 libfontconfig1 libfreexl1 libfyba0t64
100s   libgdal35 libgeos-c1t64 libgeos3.13.0 libgeotiff5 libgfortran5 libgif7
100s   libgomp1 libgpgmepp6t64 libgraphite2-3 libharfbuzz0b libhdf4-0-alt
100s   libhdf5-103-1t64 libhdf5-hl-100t64 libheif-plugin-aomdec
100s   libheif-plugin-libde265 libheif1 libice6 libjbig0 libjpeg-turbo8 libjpeg8
100s   libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js
100s   libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js
100s   libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js
100s   libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js
100s   libjs-twitter-bootstrap-datepicker libkmlbase1t64 libkmldom1t64
100s   libkmlengine1t64 liblapack3 liblcms2-2 liblerc4 libltdl7 liblua5.4-0
100s   libminizip1t64 libmysqlclient21 libnetcdf19t64 libodbc2 libodbcinst2
100s   libogdi4.1 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
100s   libpaper-utils libpaper1 libpixman-1-0 libpoppler140 libpq5 libproj25
100s   libqhull-r8.0 librttopo1 libsharpyuv0 libsm6 libsnappy1v5 libspatialite8t64
100s   libsz2 libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6 libudunits2-0
100s   libudunits2-data liburiparser1 libwebp7 libxcb-render0 libxcb-shm0
100s   libxerces-c3.2t64 libxft2 libxrender1 libxss1 libxt6t64 littler mysql-common
100s   node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data
100s   proj-data r-base-core r-cran-abind r-cran-base64enc r-cran-bdsmatrix
100s   r-cran-bslib r-cran-cachem r-cran-class r-cran-classint r-cran-cli
100s   r-cran-collapse r-cran-commonmark r-cran-crayon r-cran-dbi r-cran-digest
100s   r-cran-e1071 r-cran-evaluate r-cran-fastmap r-cran-fnn r-cran-fontawesome
100s   r-cran-foreign r-cran-formula r-cran-fs r-cran-generics r-cran-glue
100s   r-cran-gstat r-cran-highr r-cran-htmltools r-cran-httpuv r-cran-intervals
100s   r-cran-isocodes r-cran-jquerylib r-cran-jsonlite r-cran-kernsmooth
100s   r-cran-knitr r-cran-later r-cran-lattice r-cran-lifecycle r-cran-littler
100s   r-cran-lmtest r-cran-magrittr r-cran-mapdata r-cran-maps r-cran-markdown
100s   r-cran-mass r-cran-maxlik r-cran-memoise r-cran-mime r-cran-misctools
100s   r-cran-nlme r-cran-pkgkitten r-cran-plm r-cran-promises r-cran-proxy
100s   r-cran-r6 r-cran-rappdirs r-cran-raster r-cran-rbibutils r-cran-rcolorbrewer
100s   r-cran-rcpp r-cran-rdpack r-cran-rlang r-cran-rmarkdown r-cran-rpostgresql
100s   r-cran-s2 r-cran-sandwich r-cran-sass r-cran-sf r-cran-sftime r-cran-shiny
100s   r-cran-sourcetools r-cran-sp r-cran-spacetime r-cran-stars r-cran-terra
100s   r-cran-tinytex r-cran-units r-cran-withr r-cran-wk r-cran-xfun r-cran-xtable
100s   r-cran-xts r-cran-yaml r-cran-zoo unixodbc-common unzip x11-common xdg-utils
100s   zip
100s 0 upgraded, 205 newly installed, 0 to remove and 0 not upgraded.
100s Need to get 208 MB/208 MB of archives.
100s After this operation, 634 MB of additional disk space will be used.
100s Get:1 /tmp/autopkgtest.2ZIMwP/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [804 B]
101s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB]
101s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB]
101s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB]
101s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB]
101s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB]
101s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB]
101s Get:8 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB]
101s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB]
101s Get:10 http://ftpmaster.internal/ubuntu plucky/universe amd64 gdal-data all 3.9.3+dfsg-1build1 [269 kB]
101s Get:11 http://ftpmaster.internal/ubuntu plucky/universe amd64 gdal-plugins amd64 3.9.3+dfsg-1build1 [25.3 kB]
101s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 11+nmu1 [5936 B]
101s Get:13 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB]
101s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libaom3 amd64 3.11.0-1 [2761 kB]
101s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-3build2 [247 kB]
101s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-8ubuntu1 [909 kB]
101s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-3build2 [2668 kB]
102s Get:18 http://ftpmaster.internal/ubuntu plucky/universe amd64 libarpack2t64 amd64 3.9.1-1.1ubuntu1 [107 kB]
102s Get:19 http://ftpmaster.internal/ubuntu plucky/universe amd64 libarmadillo14 amd64 1:14.0.1+dfsg-2build1 [104 kB]
102s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libsnappy1v5 amd64 1.2.1-1 [30.4 kB]
102s Get:21 http://ftpmaster.internal/ubuntu plucky/universe amd64 libblosc1 amd64 1.21.5+ds-1build1 [36.2 kB]
102s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB]
102s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB]
102s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B]
102s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB]
102s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB]
102s Get:27 http://ftpmaster.internal/ubuntu plucky/universe amd64 libcfitsio10t64 amd64 4.4.1-2 [524 kB]
102s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB]
102s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libde265-0 amd64 1.0.15-1build4 [168 kB]
102s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.22-1 [64.5 kB]
102s Get:31 http://ftpmaster.internal/ubuntu plucky/universe amd64 libfyba0t64 amd64 4.1.1-11build1 [119 kB]
102s Get:32 http://ftpmaster.internal/ubuntu plucky/universe amd64 libminizip1t64 amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [22.9 kB]
102s Get:33 http://ftpmaster.internal/ubuntu plucky/universe amd64 libfreexl1 amd64 2.0.0-1build2 [41.7 kB]
102s Get:34 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeos3.13.0 amd64 3.13.0-1 [1017 kB]
102s Get:35 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeos-c1t64 amd64 3.13.0-1 [103 kB]
102s Get:36 http://ftpmaster.internal/ubuntu plucky/universe amd64 proj-data all 9.5.0-1 [7919 kB]
102s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB]
102s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB]
102s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B]
102s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB]
102s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [17.5 kB]
102s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.4.0-0.1 [231 kB]
102s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB]
102s Get:44 http://ftpmaster.internal/ubuntu plucky/universe amd64 libproj25 amd64 9.5.0-1 [1500 kB]
102s Get:45 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeotiff5 amd64 1.7.3-1 [63.0 kB]
102s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libgif7 amd64 5.2.2-1ubuntu1 [35.2 kB]
102s Get:47 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B]
102s Get:48 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf4-0-alt amd64 4.3.0-1 [285 kB]
102s Get:49 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-103-1t64 amd64 1.10.10+repack-4ubuntu3 [1280 kB]
102s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif-plugin-aomdec amd64 1.19.3-1 [11.5 kB]
102s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif-plugin-libde265 amd64 1.19.3-1 [8968 B]
102s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif1 amd64 1.19.3-1 [415 kB]
102s Get:53 http://ftpmaster.internal/ubuntu plucky/universe amd64 liburiparser1 amd64 0.9.8+dfsg-2 [46.8 kB]
102s Get:54 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmlbase1t64 amd64 1.3.0-12build1 [49.9 kB]
102s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmldom1t64 amd64 1.3.0-12build1 [156 kB]
102s Get:56 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmlengine1t64 amd64 1.3.0-12build1 [71.4 kB]
102s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 mysql-common all 5.8+1.1.1 [6800 B]
102s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libmysqlclient21 amd64 8.0.40-1 [1250 kB]
103s Get:59 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-4ubuntu3 [56.6 kB]
103s Get:60 http://ftpmaster.internal/ubuntu plucky/universe amd64 libnetcdf19t64 amd64 1:4.9.2-6ubuntu1 [472 kB]
103s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl7 amd64 2.4.7-8 [43.9 kB]
103s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libodbc2 amd64 2.3.12-1ubuntu1 [158 kB]
103s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 unixodbc-common all 2.3.12-1ubuntu1 [8796 B]
103s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libodbcinst2 amd64 2.3.12-1ubuntu1 [30.7 kB]
103s Get:65 http://ftpmaster.internal/ubuntu plucky/universe amd64 libogdi4.1 amd64 4.1.1+ds-5 [219 kB]
103s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libopenjp2-7 amd64 2.5.0-2ubuntu1 [184 kB]
103s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libgpgmepp6t64 amd64 1.24.0-2ubuntu1 [126 kB]
103s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 liblcms2-2 amd64 2.16-2 [212 kB]
103s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 libpoppler140 amd64 24.08.0-3 [1262 kB]
103s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 libpq5 amd64 17.0-1 [249 kB]
103s Get:71 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqhull-r8.0 amd64 2020.2-6build1 [193 kB]
103s Get:72 http://ftpmaster.internal/ubuntu plucky/universe amd64 librttopo1 amd64 1.1.0-3build2 [191 kB]
103s Get:73 http://ftpmaster.internal/ubuntu plucky/universe amd64 libspatialite8t64 amd64 5.1.0-3build1 [1919 kB]
103s Get:74 http://ftpmaster.internal/ubuntu plucky/universe amd64 libxerces-c3.2t64 amd64 3.2.4+debian-1.3 [917 kB]
103s Get:75 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgdal35 amd64 3.9.3+dfsg-1build1 [10.0 MB]
103s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-8ubuntu1 [148 kB]
103s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB]
103s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.0.1-1 [540 kB]
103s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB]
103s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB]
103s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB]
103s Get:82 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB]
103s Get:83 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB]
104s Get:84 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB]
104s Get:85 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB]
104s Get:86 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB]
104s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
104s Get:88 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB]
104s Get:89 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB]
104s Get:90 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B]
104s Get:91 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB]
104s Get:92 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB]
104s Get:93 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB]
104s Get:94 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB]
104s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 liblua5.4-0 amd64 5.4.6-3build2 [166 kB]
104s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB]
104s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB]
104s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.54.0+ds-3 [252 kB]
104s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.54.0+ds-3 [51.6 kB]
104s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.54.0+ds-3 [29.1 kB]
104s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper1 amd64 1.1.29build1 [13.4 kB]
104s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 1.1.29build1 [8650 B]
104s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB]
104s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.15+dfsg-2 [1085 kB]
104s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB]
104s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B]
104s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.15-1 [862 kB]
104s Get:108 http://ftpmaster.internal/ubuntu plucky/universe amd64 libudunits2-data all 2.2.28-7build1 [19.4 kB]
104s Get:109 http://ftpmaster.internal/ubuntu plucky/universe amd64 libudunits2-0 amd64 2.2.28-7build1 [54.1 kB]
104s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB]
104s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu1 [185 kB]
104s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB]
104s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB]
104s Get:114 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.2-1 [28.9 MB]
105s Get:115 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-1 [96.0 kB]
105s Get:116 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-1 [2486 B]
105s Get:117 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB]
105s Get:118 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
105s Get:119 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB]
105s Get:120 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc-data all 3.1.11.1-3 [78.7 kB]
105s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc amd64 3.1.11.1+ds-2 [27.2 MB]
107s Get:122 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-abind all 1.4-8-1 [66.9 kB]
107s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB]
107s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bdsmatrix amd64 1.3-7-1 [299 kB]
107s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.4-1 [1708 kB]
107s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB]
107s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB]
107s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB]
107s Get:129 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB]
107s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB]
107s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.8.9+dfsg-1 [445 kB]
107s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.3-1 [1348 kB]
107s Get:133 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.7.0-1 [154 kB]
107s Get:134 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
107s Get:135 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB]
107s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB]
107s Get:137 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.4+dfsg-1 [245 kB]
107s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB]
107s Get:139 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB]
107s Get:140 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB]
107s Get:141 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.7.0+dfsg-1 [4255 kB]
107s Get:142 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mass amd64 7.3-61-1 [1109 kB]
107s Get:143 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-class amd64 7.3-22-2build1 [88.2 kB]
107s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB]
107s Get:145 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-e1071 amd64 1.7-16-1 [565 kB]
107s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernsmooth amd64 2.23-24-1 [92.9 kB]
107s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-classint amd64 0.4-10+dfsg-1 [106 kB]
107s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
107s Get:149 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.13-1-1 [1993 kB]
107s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-collapse amd64 2.0.16-1 [3351 kB]
107s Get:151 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.1-1 [131 kB]
107s Get:152 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.2-1 [164 kB]
107s Get:153 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dbi all 1.2.3-1 [853 kB]
107s Get:154 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 1.0.0-1 [111 kB]
107s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fnn amd64 1.1.4.1-1 [126 kB]
107s Get:156 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.2-1 [1300 kB]
107s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-foreign amd64 0.8.87-1 [245 kB]
107s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-formula all 1.2-5-1 [158 kB]
107s Get:159 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB]
107s Get:160 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB]
107s Get:161 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sp amd64 1:2.1-4+dfsg-1 [1472 kB]
107s Get:162 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-zoo amd64 1.8-12-2 [984 kB]
107s Get:163 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB]
107s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-wk amd64 0.9.4-1 [1791 kB]
108s Get:165 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-s2 amd64 1.1.7-1 [2023 kB]
108s Get:166 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-units amd64 0.8-5+dfsg-1 [275 kB]
108s Get:167 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sf amd64 1.0-16+dfsg-1build1 [3064 kB]
108s Get:168 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sftime all 0.2-0-6 [168 kB]
108s Get:169 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xts amd64 0.14.0-1 [760 kB]
108s Get:170 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-intervals amd64 0.15.5-1 [602 kB]
108s Get:171 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-spacetime all 1.3-2-1 [2776 kB]
108s Get:172 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stars all 0.6-6-1 [4105 kB]
108s Get:173 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gstat amd64 2.1-2-1 [2335 kB]
108s Get:174 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xfun amd64 0.49+dfsg-1 [545 kB]
108s Get:175 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB]
108s Get:176 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.3.2+dfsg-1 [123 kB]
108s Get:177 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.0+dfsg-1 [287 kB]
108s Get:178 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB]
108s Get:179 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-isocodes all 2024.02.12-1 [312 kB]
108s Get:180 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB]
108s Get:181 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB]
108s Get:182 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-knitr all 1.48+dfsg-1 [910 kB]
108s Get:183 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lmtest amd64 0.9.40-1 [396 kB]
108s Get:184 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-maps amd64 3.4.2-1 [2359 kB]
109s Get:185 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mapdata amd64 2.3.1-1 [23.5 MB]
109s Get:186 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-markdown all 1.12+dfsg-2 [179 kB]
109s Get:187 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-misctools all 0.6-28-1 [99.9 kB]
109s Get:188 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sandwich all 3.1-1-1 [1483 kB]
109s Get:189 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-maxlik all 1.5-2.1-1 [1083 kB]
109s Get:190 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nlme amd64 3.1.166-1 [2314 kB]
110s Get:191 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rbibutils amd64 2.3-1 [1023 kB]
110s Get:192 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rdpack all 2.6.2-1 [757 kB]
110s Get:193 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plm all 2.6-4-1 [2161 kB]
110s Get:194 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-terra amd64 1.7-78-1 [3751 kB]
110s Get:195 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-raster amd64 3.6-30-1 [3145 kB]
110s Get:196 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB]
110s Get:197 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tinytex all 0.53-1 [145 kB]
110s Get:198 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-modernizr all 3.13.0-0.1 [101 kB]
110s Get:199 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB]
110s Get:200 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB]
110s Get:201 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
110s Get:202 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB]
110s Get:203 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.9.1+dfsg-1 [3111 kB]
111s Get:204 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rmarkdown all 2.28+dfsg-1 [1501 kB]
111s Get:205 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rpostgresql amd64 0.7-7+dfsg-1 [365 kB]
111s Preconfiguring packages ...
111s Fetched 208 MB in 10s (20.0 MB/s)
111s Selecting previously unselected package fonts-dejavu-mono.
111s (Reading database ... 
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111s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8_all.deb ...
111s Unpacking fonts-dejavu-mono (2.37-8) ...
112s Selecting previously unselected package fonts-dejavu-core.
112s Preparing to unpack .../001-fonts-dejavu-core_2.37-8_all.deb ...
112s Unpacking fonts-dejavu-core (2.37-8) ...
112s Selecting previously unselected package fontconfig-config.
112s Preparing to unpack .../002-fontconfig-config_2.15.0-1.1ubuntu2_amd64.deb ...
112s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ...
112s Selecting previously unselected package libfontconfig1:amd64.
112s Preparing to unpack .../003-libfontconfig1_2.15.0-1.1ubuntu2_amd64.deb ...
112s Unpacking libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ...
112s Selecting previously unselected package fontconfig.
112s Preparing to unpack .../004-fontconfig_2.15.0-1.1ubuntu2_amd64.deb ...
112s Unpacking fontconfig (2.15.0-1.1ubuntu2) ...
112s Selecting previously unselected package fonts-font-awesome.
112s Preparing to unpack .../005-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ...
112s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ...
112s Selecting previously unselected package fonts-glyphicons-halflings.
112s Preparing to unpack .../006-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ...
112s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
112s Selecting previously unselected package fonts-mathjax.
112s Preparing to unpack .../007-fonts-mathjax_2.7.9+dfsg-1_all.deb ...
112s Unpacking fonts-mathjax (2.7.9+dfsg-1) ...
112s Selecting previously unselected package gdal-data.
112s Preparing to unpack .../008-gdal-data_3.9.3+dfsg-1build1_all.deb ...
112s Unpacking gdal-data (3.9.3+dfsg-1build1) ...
112s Selecting previously unselected package gdal-plugins:amd64.
112s Preparing to unpack .../009-gdal-plugins_3.9.3+dfsg-1build1_amd64.deb ...
112s Unpacking gdal-plugins:amd64 (3.9.3+dfsg-1build1) ...
112s Selecting previously unselected package javascript-common.
112s Preparing to unpack .../010-javascript-common_11+nmu1_all.deb ...
112s Unpacking javascript-common (11+nmu1) ...
112s Selecting previously unselected package libaec0:amd64.
112s Preparing to unpack .../011-libaec0_1.1.3-1_amd64.deb ...
112s Unpacking libaec0:amd64 (1.1.3-1) ...
112s Selecting previously unselected package libaom3:amd64.
112s Preparing to unpack .../012-libaom3_3.11.0-1_amd64.deb ...
112s Unpacking libaom3:amd64 (3.11.0-1) ...
112s Selecting previously unselected package libblas3:amd64.
112s Preparing to unpack .../013-libblas3_3.12.0-3build2_amd64.deb ...
112s Unpacking libblas3:amd64 (3.12.0-3build2) ...
112s Selecting previously unselected package libgfortran5:amd64.
112s Preparing to unpack .../014-libgfortran5_14.2.0-8ubuntu1_amd64.deb ...
112s Unpacking libgfortran5:amd64 (14.2.0-8ubuntu1) ...
112s Selecting previously unselected package liblapack3:amd64.
112s Preparing to unpack .../015-liblapack3_3.12.0-3build2_amd64.deb ...
112s Unpacking liblapack3:amd64 (3.12.0-3build2) ...
112s Selecting previously unselected package libarpack2t64:amd64.
112s Preparing to unpack .../016-libarpack2t64_3.9.1-1.1ubuntu1_amd64.deb ...
112s Unpacking libarpack2t64:amd64 (3.9.1-1.1ubuntu1) ...
112s Selecting previously unselected package libarmadillo14.
112s Preparing to unpack .../017-libarmadillo14_1%3a14.0.1+dfsg-2build1_amd64.deb ...
112s Unpacking libarmadillo14 (1:14.0.1+dfsg-2build1) ...
112s Selecting previously unselected package libsnappy1v5:amd64.
112s Preparing to unpack .../018-libsnappy1v5_1.2.1-1_amd64.deb ...
112s Unpacking libsnappy1v5:amd64 (1.2.1-1) ...
112s Selecting previously unselected package libblosc1:amd64.
112s Preparing to unpack .../019-libblosc1_1.21.5+ds-1build1_amd64.deb ...
112s Unpacking libblosc1:amd64 (1.21.5+ds-1build1) ...
112s Selecting previously unselected package libpixman-1-0:amd64.
112s Preparing to unpack .../020-libpixman-1-0_0.44.0-3_amd64.deb ...
112s Unpacking libpixman-1-0:amd64 (0.44.0-3) ...
112s Selecting previously unselected package libxcb-render0:amd64.
112s Preparing to unpack .../021-libxcb-render0_1.17.0-2_amd64.deb ...
112s Unpacking libxcb-render0:amd64 (1.17.0-2) ...
112s Selecting previously unselected package libxcb-shm0:amd64.
112s Preparing to unpack .../022-libxcb-shm0_1.17.0-2_amd64.deb ...
112s Unpacking libxcb-shm0:amd64 (1.17.0-2) ...
112s Selecting previously unselected package libxrender1:amd64.
112s Preparing to unpack .../023-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ...
112s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ...
112s Selecting previously unselected package libcairo2:amd64.
112s Preparing to unpack .../024-libcairo2_1.18.2-2_amd64.deb ...
112s Unpacking libcairo2:amd64 (1.18.2-2) ...
112s Selecting previously unselected package libcfitsio10t64:amd64.
112s Preparing to unpack .../025-libcfitsio10t64_4.4.1-2_amd64.deb ...
112s Unpacking libcfitsio10t64:amd64 (4.4.1-2) ...
113s Selecting previously unselected package libdatrie1:amd64.
113s Preparing to unpack .../026-libdatrie1_0.2.13-3build1_amd64.deb ...
113s Unpacking libdatrie1:amd64 (0.2.13-3build1) ...
113s Selecting previously unselected package libde265-0:amd64.
113s Preparing to unpack .../027-libde265-0_1.0.15-1build4_amd64.deb ...
113s Unpacking libde265-0:amd64 (1.0.15-1build4) ...
113s Selecting previously unselected package libdeflate0:amd64.
113s Preparing to unpack .../028-libdeflate0_1.22-1_amd64.deb ...
113s Unpacking libdeflate0:amd64 (1.22-1) ...
113s Selecting previously unselected package libfyba0t64:amd64.
113s Preparing to unpack .../029-libfyba0t64_4.1.1-11build1_amd64.deb ...
113s Unpacking libfyba0t64:amd64 (4.1.1-11build1) ...
113s Selecting previously unselected package libminizip1t64:amd64.
113s Preparing to unpack .../030-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ...
113s Unpacking libminizip1t64:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
113s Selecting previously unselected package libfreexl1:amd64.
113s Preparing to unpack .../031-libfreexl1_2.0.0-1build2_amd64.deb ...
113s Unpacking libfreexl1:amd64 (2.0.0-1build2) ...
113s Selecting previously unselected package libgeos3.13.0:amd64.
113s Preparing to unpack .../032-libgeos3.13.0_3.13.0-1_amd64.deb ...
113s Unpacking libgeos3.13.0:amd64 (3.13.0-1) ...
113s Selecting previously unselected package libgeos-c1t64:amd64.
113s Preparing to unpack .../033-libgeos-c1t64_3.13.0-1_amd64.deb ...
113s Unpacking libgeos-c1t64:amd64 (3.13.0-1) ...
113s Selecting previously unselected package proj-data.
113s Preparing to unpack .../034-proj-data_9.5.0-1_all.deb ...
113s Unpacking proj-data (9.5.0-1) ...
113s Selecting previously unselected package libjbig0:amd64.
113s Preparing to unpack .../035-libjbig0_2.1-6.1ubuntu2_amd64.deb ...
113s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ...
113s Selecting previously unselected package libjpeg-turbo8:amd64.
113s Preparing to unpack .../036-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ...
113s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ...
113s Selecting previously unselected package libjpeg8:amd64.
113s Preparing to unpack .../037-libjpeg8_8c-2ubuntu11_amd64.deb ...
113s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ...
113s Selecting previously unselected package liblerc4:amd64.
113s Preparing to unpack .../038-liblerc4_4.0.0+ds-5ubuntu1_amd64.deb ...
113s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu1) ...
113s Selecting previously unselected package libsharpyuv0:amd64.
113s Preparing to unpack .../039-libsharpyuv0_1.4.0-0.1_amd64.deb ...
113s Unpacking libsharpyuv0:amd64 (1.4.0-0.1) ...
113s Selecting previously unselected package libwebp7:amd64.
113s Preparing to unpack .../040-libwebp7_1.4.0-0.1_amd64.deb ...
113s Unpacking libwebp7:amd64 (1.4.0-0.1) ...
113s Selecting previously unselected package libtiff6:amd64.
113s Preparing to unpack .../041-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ...
113s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ...
113s Selecting previously unselected package libproj25:amd64.
113s Preparing to unpack .../042-libproj25_9.5.0-1_amd64.deb ...
113s Unpacking libproj25:amd64 (9.5.0-1) ...
113s Selecting previously unselected package libgeotiff5:amd64.
113s Preparing to unpack .../043-libgeotiff5_1.7.3-1_amd64.deb ...
113s Unpacking libgeotiff5:amd64 (1.7.3-1) ...
113s Selecting previously unselected package libgif7:amd64.
113s Preparing to unpack .../044-libgif7_5.2.2-1ubuntu1_amd64.deb ...
113s Unpacking libgif7:amd64 (5.2.2-1ubuntu1) ...
113s Selecting previously unselected package libsz2:amd64.
113s Preparing to unpack .../045-libsz2_1.1.3-1_amd64.deb ...
113s Unpacking libsz2:amd64 (1.1.3-1) ...
113s Selecting previously unselected package libhdf4-0-alt:amd64.
113s Preparing to unpack .../046-libhdf4-0-alt_4.3.0-1_amd64.deb ...
113s Unpacking libhdf4-0-alt:amd64 (4.3.0-1) ...
113s Selecting previously unselected package libhdf5-103-1t64:amd64.
113s Preparing to unpack .../047-libhdf5-103-1t64_1.10.10+repack-4ubuntu3_amd64.deb ...
113s Unpacking libhdf5-103-1t64:amd64 (1.10.10+repack-4ubuntu3) ...
113s Selecting previously unselected package libheif-plugin-aomdec:amd64.
113s Preparing to unpack .../048-libheif-plugin-aomdec_1.19.3-1_amd64.deb ...
113s Unpacking libheif-plugin-aomdec:amd64 (1.19.3-1) ...
113s Selecting previously unselected package libheif-plugin-libde265:amd64.
113s Preparing to unpack .../049-libheif-plugin-libde265_1.19.3-1_amd64.deb ...
113s Unpacking libheif-plugin-libde265:amd64 (1.19.3-1) ...
113s Selecting previously unselected package libheif1:amd64.
113s Preparing to unpack .../050-libheif1_1.19.3-1_amd64.deb ...
113s Unpacking libheif1:amd64 (1.19.3-1) ...
113s Selecting previously unselected package liburiparser1:amd64.
113s Preparing to unpack .../051-liburiparser1_0.9.8+dfsg-2_amd64.deb ...
113s Unpacking liburiparser1:amd64 (0.9.8+dfsg-2) ...
113s Selecting previously unselected package libkmlbase1t64:amd64.
113s Preparing to unpack .../052-libkmlbase1t64_1.3.0-12build1_amd64.deb ...
113s Unpacking libkmlbase1t64:amd64 (1.3.0-12build1) ...
113s Selecting previously unselected package libkmldom1t64:amd64.
113s Preparing to unpack .../053-libkmldom1t64_1.3.0-12build1_amd64.deb ...
113s Unpacking libkmldom1t64:amd64 (1.3.0-12build1) ...
113s Selecting previously unselected package libkmlengine1t64:amd64.
113s Preparing to unpack .../054-libkmlengine1t64_1.3.0-12build1_amd64.deb ...
113s Unpacking libkmlengine1t64:amd64 (1.3.0-12build1) ...
113s Selecting previously unselected package mysql-common.
113s Preparing to unpack .../055-mysql-common_5.8+1.1.1_all.deb ...
113s Unpacking mysql-common (5.8+1.1.1) ...
113s Selecting previously unselected package libmysqlclient21:amd64.
113s Preparing to unpack .../056-libmysqlclient21_8.0.40-1_amd64.deb ...
113s Unpacking libmysqlclient21:amd64 (8.0.40-1) ...
113s Selecting previously unselected package libhdf5-hl-100t64:amd64.
113s Preparing to unpack .../057-libhdf5-hl-100t64_1.10.10+repack-4ubuntu3_amd64.deb ...
113s Unpacking libhdf5-hl-100t64:amd64 (1.10.10+repack-4ubuntu3) ...
113s Selecting previously unselected package libnetcdf19t64:amd64.
113s Preparing to unpack .../058-libnetcdf19t64_1%3a4.9.2-6ubuntu1_amd64.deb ...
113s Unpacking libnetcdf19t64:amd64 (1:4.9.2-6ubuntu1) ...
113s Selecting previously unselected package libltdl7:amd64.
113s Preparing to unpack .../059-libltdl7_2.4.7-8_amd64.deb ...
113s Unpacking libltdl7:amd64 (2.4.7-8) ...
113s Selecting previously unselected package libodbc2:amd64.
113s Preparing to unpack .../060-libodbc2_2.3.12-1ubuntu1_amd64.deb ...
113s Unpacking libodbc2:amd64 (2.3.12-1ubuntu1) ...
113s Selecting previously unselected package unixodbc-common.
113s Preparing to unpack .../061-unixodbc-common_2.3.12-1ubuntu1_all.deb ...
113s Unpacking unixodbc-common (2.3.12-1ubuntu1) ...
113s Selecting previously unselected package libodbcinst2:amd64.
113s Preparing to unpack .../062-libodbcinst2_2.3.12-1ubuntu1_amd64.deb ...
113s Unpacking libodbcinst2:amd64 (2.3.12-1ubuntu1) ...
113s Selecting previously unselected package libogdi4.1:amd64.
113s Preparing to unpack .../063-libogdi4.1_4.1.1+ds-5_amd64.deb ...
113s Unpacking libogdi4.1:amd64 (4.1.1+ds-5) ...
113s Selecting previously unselected package libopenjp2-7:amd64.
113s Preparing to unpack .../064-libopenjp2-7_2.5.0-2ubuntu1_amd64.deb ...
113s Unpacking libopenjp2-7:amd64 (2.5.0-2ubuntu1) ...
113s Selecting previously unselected package libgpgmepp6t64:amd64.
113s Preparing to unpack .../065-libgpgmepp6t64_1.24.0-2ubuntu1_amd64.deb ...
113s Unpacking libgpgmepp6t64:amd64 (1.24.0-2ubuntu1) ...
114s Selecting previously unselected package liblcms2-2:amd64.
114s Preparing to unpack .../066-liblcms2-2_2.16-2_amd64.deb ...
114s Unpacking liblcms2-2:amd64 (2.16-2) ...
114s Selecting previously unselected package libpoppler140:amd64.
114s Preparing to unpack .../067-libpoppler140_24.08.0-3_amd64.deb ...
114s Unpacking libpoppler140:amd64 (24.08.0-3) ...
114s Selecting previously unselected package libpq5:amd64.
114s Preparing to unpack .../068-libpq5_17.0-1_amd64.deb ...
114s Unpacking libpq5:amd64 (17.0-1) ...
114s Selecting previously unselected package libqhull-r8.0:amd64.
114s Preparing to unpack .../069-libqhull-r8.0_2020.2-6build1_amd64.deb ...
114s Unpacking libqhull-r8.0:amd64 (2020.2-6build1) ...
114s Selecting previously unselected package librttopo1:amd64.
114s Preparing to unpack .../070-librttopo1_1.1.0-3build2_amd64.deb ...
114s Unpacking librttopo1:amd64 (1.1.0-3build2) ...
114s Selecting previously unselected package libspatialite8t64:amd64.
114s Preparing to unpack .../071-libspatialite8t64_5.1.0-3build1_amd64.deb ...
114s Unpacking libspatialite8t64:amd64 (5.1.0-3build1) ...
114s Selecting previously unselected package libxerces-c3.2t64:amd64.
114s Preparing to unpack .../072-libxerces-c3.2t64_3.2.4+debian-1.3_amd64.deb ...
114s Unpacking libxerces-c3.2t64:amd64 (3.2.4+debian-1.3) ...
114s Selecting previously unselected package libgdal35:amd64.
114s Preparing to unpack .../073-libgdal35_3.9.3+dfsg-1build1_amd64.deb ...
114s Unpacking libgdal35:amd64 (3.9.3+dfsg-1build1) ...
114s Selecting previously unselected package libgomp1:amd64.
114s Preparing to unpack .../074-libgomp1_14.2.0-8ubuntu1_amd64.deb ...
114s Unpacking libgomp1:amd64 (14.2.0-8ubuntu1) ...
114s Selecting previously unselected package libgraphite2-3:amd64.
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131s (Reading database ... 92433 files and directories currently installed.)
131s Removing autopkgtest-satdep (0) ...
131s autopkgtest [20:51:35]: test run-unit-test: [-----------------------
131s BEGIN TEST basic.R
131s 
131s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
131s Copyright (C) 2024 The R Foundation for Statistical Computing
131s Platform: x86_64-pc-linux-gnu
131s 
131s R is free software and comes with ABSOLUTELY NO WARRANTY.
131s You are welcome to redistribute it under certain conditions.
131s Type 'license()' or 'licence()' for distribution details.
131s 
131s R is a collaborative project with many contributors.
131s Type 'contributors()' for more information and
131s 'citation()' on how to cite R or R packages in publications.
131s 
131s Type 'demo()' for some demos, 'help()' for on-line help, or
131s 'help.start()' for an HTML browser interface to help.
131s Type 'q()' to quit R.
131s 
132s > options(digits=5)
132s > options(xts_check_TZ=FALSE)
132s > ###################################################
132s > ### chunk number 4: 
132s > ###################################################
132s > library(sp)
132s > library(spacetime)
132s > set.seed(13579) # to make outcome a bit predictable!
132s > sp = cbind(x = c(0,0,1), y = c(0,1,1))
132s > row.names(sp) = paste("point", 1:nrow(sp), sep="")
132s > sp = SpatialPoints(sp)
132s > time = as.POSIXct("2010-08-05", tz="GMT")+3600*(10:13)
132s > m = c(10,20,30) # means for each of the 3 point locations
132s > mydata = rnorm(length(sp)*length(time),mean=rep(m, 4))
132s > IDs = paste("ID", 1:length(mydata), sep = "_")
132s > mydata = data.frame(values = signif(mydata,3), ID=IDs)
132s > stfdf = STFDF(sp, time, mydata)
132s > 
132s > 
132s > ###################################################
132s > ### chunk number 5: 
132s > ###################################################
132s > format(as.data.frame(stfdf, row.names = IDs), tz="GMT")
132s       x y  sp.ID                time             endTime timeIndex values    ID
132s ID_1  0 0 point1 2010-08-05 10:00:00 2010-08-05 11:00:00         1   8.77  ID_1
132s ID_2  0 1 point2 2010-08-05 10:00:00 2010-08-05 11:00:00         1  18.70  ID_2
132s ID_3  1 1 point3 2010-08-05 10:00:00 2010-08-05 11:00:00         1  29.70  ID_3
132s ID_4  0 0 point1 2010-08-05 11:00:00 2010-08-05 12:00:00         2   8.47  ID_4
132s ID_5  0 1 point2 2010-08-05 11:00:00 2010-08-05 12:00:00         2  21.10  ID_5
132s ID_6  1 1 point3 2010-08-05 11:00:00 2010-08-05 12:00:00         2  32.50  ID_6
132s ID_7  0 0 point1 2010-08-05 12:00:00 2010-08-05 13:00:00         3  10.80  ID_7
132s ID_8  0 1 point2 2010-08-05 12:00:00 2010-08-05 13:00:00         3  20.20  ID_8
132s ID_9  1 1 point3 2010-08-05 12:00:00 2010-08-05 13:00:00         3  29.00  ID_9
132s ID_10 0 0 point1 2010-08-05 13:00:00 2010-08-05 14:00:00         4   9.74 ID_10
132s ID_11 0 1 point2 2010-08-05 13:00:00 2010-08-05 14:00:00         4  20.70 ID_11
132s ID_12 1 1 point3 2010-08-05 13:00:00 2010-08-05 14:00:00         4  30.50 ID_12
132s > format(as(stfdf, "data.frame")[1:4,], tz="GMT")
132s   x y  sp.ID                time             endTime timeIndex values   ID
132s 1 0 0 point1 2010-08-05 10:00:00 2010-08-05 11:00:00         1   8.77 ID_1
132s 2 0 1 point2 2010-08-05 10:00:00 2010-08-05 11:00:00         1  18.70 ID_2
132s 3 1 1 point3 2010-08-05 10:00:00 2010-08-05 11:00:00         1  29.70 ID_3
132s 4 0 0 point1 2010-08-05 11:00:00 2010-08-05 12:00:00         2   8.47 ID_4
132s > 
132s > ###################################################
132s > ### chunk number 6: 
132s > ###################################################
132s > unstack(stfdf)
132s                     point1 point2 point3
132s 2010-08-05 10:00:00   8.77   18.7   29.7
132s 2010-08-05 11:00:00   8.47   21.1   32.5
132s 2010-08-05 12:00:00  10.80   20.2   29.0
132s 2010-08-05 13:00:00   9.74   20.7   30.5
132s > t(unstack(stfdf))
132s        2010-08-05 10:00:00 2010-08-05 11:00:00 2010-08-05 12:00:00
132s point1                8.77                8.47                10.8
132s point2               18.70               21.10                20.2
132s point3               29.70               32.50                29.0
132s        2010-08-05 13:00:00
132s point1                9.74
132s point2               20.70
132s point3               30.50
132s > unstack(stfdf, which = 2)
132s                     point1 point2 point3
132s 2010-08-05 10:00:00   ID_1   ID_2   ID_3
132s 2010-08-05 11:00:00   ID_4   ID_5   ID_6
132s 2010-08-05 12:00:00   ID_7   ID_8   ID_9
132s 2010-08-05 13:00:00  ID_10  ID_11  ID_12
132s > 
132s > ###################################################
132s > ### chunk number 7: 
132s > ###################################################
132s > as(stfdf[,,1], "xts")
132s                     point1 point2 point3
132s 2010-08-05 10:00:00   8.77   18.7   29.7
132s 2010-08-05 11:00:00   8.47   21.1   32.5
132s 2010-08-05 12:00:00  10.80   20.2   29.0
132s 2010-08-05 13:00:00   9.74   20.7   30.5
132s > as(stfdf[,,2], "xts")
132s                     point1 point2 point3
132s 2010-08-05 10:00:00   ID_1   ID_2   ID_3
132s 2010-08-05 11:00:00   ID_4   ID_5   ID_6
132s 2010-08-05 12:00:00   ID_7   ID_8   ID_9
132s 2010-08-05 13:00:00  ID_10  ID_11  ID_12
132s > 
132s > ###################################################
132s > ### chunk number 8: 
132s > ###################################################
132s > stfdf[[1]]
132s  [1]  8.77 18.70 29.70  8.47 21.10 32.50 10.80 20.20 29.00  9.74 20.70 30.50
132s > stfdf[["values"]]
132s  [1]  8.77 18.70 29.70  8.47 21.10 32.50 10.80 20.20 29.00  9.74 20.70 30.50
132s > stfdf[["newVal"]] <- rnorm(12)
132s > stfdf$ID
132s  [1] "ID_1"  "ID_2"  "ID_3"  "ID_4"  "ID_5"  "ID_6"  "ID_7"  "ID_8"  "ID_9" 
132s [10] "ID_10" "ID_11" "ID_12"
132s > stfdf$ID = paste("OldIDs", 1:12, sep="")
132s > stfdf$NewID = paste("NewIDs", 12:1, sep="")
132s > stfdf
132s An object of class "STFDF"
132s Slot "data":
132s    values       ID    newVal    NewID
132s 1    8.77  OldIDs1 -0.766670 NewIDs12
132s 2   18.70  OldIDs2 -0.437290 NewIDs11
132s 3   29.70  OldIDs3 -0.471551 NewIDs10
132s 4    8.47  OldIDs4 -0.561384  NewIDs9
132s 5   21.10  OldIDs5 -1.215165  NewIDs8
132s 6   32.50  OldIDs6  0.246818  NewIDs7
132s 7   10.80  OldIDs7 -0.861698  NewIDs6
132s 8   20.20  OldIDs8  0.659911  NewIDs5
132s 9   29.00  OldIDs9 -0.036842  NewIDs4
132s 10   9.74 OldIDs10 -0.952524  NewIDs3
132s 11  20.70 OldIDs11 -1.699710  NewIDs2
132s 12  30.50 OldIDs12  0.899851  NewIDs1
132s 
132s Slot "sp":
132s SpatialPoints:
132s        x y
132s point1 0 0
132s point2 0 1
132s point3 1 1
132s Coordinate Reference System (CRS) arguments: NA 
132s 
132s Slot "time":
132s                     timeIndex
132s 2010-08-05 10:00:00         1
132s 2010-08-05 11:00:00         2
132s 2010-08-05 12:00:00         3
132s 2010-08-05 13:00:00         4
132s 
132s Slot "endTime":
132s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
132s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
132s 
132s > 
132s > 
132s > ###################################################
132s > ### chunk number 9: 
132s > ###################################################
132s > stfdf[,1] # SpatialPointsDataFrame:
132s   coordinates values      ID   newVal    NewID
132s 1      (0, 0)   8.77 OldIDs1 -0.76667 NewIDs12
132s 2      (0, 1)  18.70 OldIDs2 -0.43729 NewIDs11
132s 3      (1, 1)  29.70 OldIDs3 -0.47155 NewIDs10
132s > stfdf[,,1]
132s An object of class "STFDF"
132s Slot "data":
132s    values
132s 1    8.77
132s 2   18.70
132s 3   29.70
132s 4    8.47
132s 5   21.10
132s 6   32.50
132s 7   10.80
132s 8   20.20
132s 9   29.00
132s 10   9.74
132s 11  20.70
132s 12  30.50
132s 
132s Slot "sp":
132s SpatialPoints:
132s        x y
132s point1 0 0
132s point2 0 1
132s point3 1 1
132s Coordinate Reference System (CRS) arguments: NA 
132s 
132s Slot "time":
132s                     timeIndex
132s 2010-08-05 10:00:00         1
132s 2010-08-05 11:00:00         2
132s 2010-08-05 12:00:00         3
132s 2010-08-05 13:00:00         4
132s 
132s Slot "endTime":
132s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
132s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
132s 
132s > stfdf[1,,1] # xts
132s                     values timeIndex
132s 2010-08-05 10:00:00   8.77         1
132s 2010-08-05 11:00:00   8.47         2
132s 2010-08-05 12:00:00  10.80         3
132s 2010-08-05 13:00:00   9.74         4
132s > stfdf[,,"ID"]
132s An object of class "STFDF"
132s Slot "data":
132s          ID
132s 1   OldIDs1
132s 2   OldIDs2
132s 3   OldIDs3
132s 4   OldIDs4
132s 5   OldIDs5
132s 6   OldIDs6
132s 7   OldIDs7
132s 8   OldIDs8
132s 9   OldIDs9
132s 10 OldIDs10
132s 11 OldIDs11
132s 12 OldIDs12
132s 
132s Slot "sp":
132s SpatialPoints:
132s        x y
132s point1 0 0
132s point2 0 1
132s point3 1 1
132s Coordinate Reference System (CRS) arguments: NA 
132s 
132s Slot "time":
132s                     timeIndex
132s 2010-08-05 10:00:00         1
132s 2010-08-05 11:00:00         2
132s 2010-08-05 12:00:00         3
132s 2010-08-05 13:00:00         4
132s 
132s Slot "endTime":
132s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
132s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
132s 
132s > stfdf[1,,"values", drop=FALSE] # stays STFDF:
132s An object of class "STFDF"
132s Slot "data":
132s   values
132s 1   8.77
132s 2   8.47
132s 3  10.80
132s 4   9.74
132s 
132s Slot "sp":
132s SpatialPoints:
132s        x y
132s point1 0 0
132s Coordinate Reference System (CRS) arguments: NA 
132s 
132s Slot "time":
132s                     timeIndex
132s 2010-08-05 10:00:00         1
132s 2010-08-05 11:00:00         2
132s 2010-08-05 12:00:00         3
132s 2010-08-05 13:00:00         4
132s 
132s Slot "endTime":
132s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
132s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
132s 
132s > stfdf[,1, drop=FALSE] #stays STFDF
132s An object of class "STFDF"
132s Slot "data":
132s   values      ID   newVal    NewID
132s 1   8.77 OldIDs1 -0.76667 NewIDs12
132s 2  18.70 OldIDs2 -0.43729 NewIDs11
132s 3  29.70 OldIDs3 -0.47155 NewIDs10
132s 
132s Slot "sp":
132s SpatialPoints:
132s        x y
132s point1 0 0
132s point2 0 1
132s point3 1 1
132s Coordinate Reference System (CRS) arguments: NA 
132s 
132s Slot "time":
132s                     timeIndex
132s 2010-08-05 10:00:00         1
132s 
132s Slot "endTime":
132s [1] "2010-08-05 11:00:00 GMT"
132s 
132s > 
132s > ###################################################
132s > ### chunk number 10: 
132s > ###################################################
132s > showClass("STSDF")
132s Class "STSDF" [package "spacetime"]
132s 
132s Slots:
132s                                                              
132s Name:        data      index         sp       time    endTime
132s Class: data.frame     matrix    Spatial        xts    POSIXct
132s 
132s Extends: 
132s Class "STS", directly
132s Class "ST", by class "STS", distance 2
132s > 
132s > ###################################################
132s > ### chunk number 11: 
132s > ###################################################
132s > showClass("STIDF")
132s Class "STIDF" [package "spacetime"]
132s 
132s Slots:
132s                                                   
132s Name:        data         sp       time    endTime
132s Class: data.frame    Spatial        xts    POSIXct
132s 
132s Extends: 
132s Class "STI", directly
132s Class "ST", by class "STI", distance 2
132s > sp = expand.grid(x = 1:3, y = 1:3)
132s > row.names(sp) = paste("point", 1:nrow(sp), sep="")
132s > sp = SpatialPoints(sp)
132s > time = as.POSIXct("2010-08-05", tz="GMT")+3600*(11:19)
132s > m = 1:9 * 10 # means for each of the 9 point locations
132s > mydata = rnorm(length(sp), mean=m)
132s > IDs = paste("ID",1:length(mydata))
132s > mydata = data.frame(values = signif(mydata,3),ID=IDs)
132s > stidf = STIDF(sp, time, mydata)
132s > stidf
132s An object of class "STIDF"
132s Slot "data":
132s   values   ID
132s 1   10.7 ID 1
132s 2   19.8 ID 2
132s 3   29.2 ID 3
132s 4   41.8 ID 4
132s 5   50.2 ID 5
132s 6   59.9 ID 6
132s 7   70.9 ID 7
132s 8   80.0 ID 8
132s 9   90.2 ID 9
132s 
132s Slot "sp":
132s SpatialPoints:
132s        x y
132s point1 1 1
132s point2 2 1
132s point3 3 1
132s point4 1 2
132s point5 2 2
132s point6 3 2
132s point7 1 3
132s point8 2 3
132s point9 3 3
132s Coordinate Reference System (CRS) arguments: NA 
132s 
132s Slot "time":
132s                     timeIndex
132s 2010-08-05 11:00:00         1
132s 2010-08-05 12:00:00         2
132s 2010-08-05 13:00:00         3
132s 2010-08-05 14:00:00         4
132s 2010-08-05 15:00:00         5
132s 2010-08-05 16:00:00         6
132s 2010-08-05 17:00:00         7
132s 2010-08-05 18:00:00         8
132s 2010-08-05 19:00:00         9
132s 
132s Slot "endTime":
132s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
132s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
132s [5] "2010-08-05 15:00:00 GMT" "2010-08-05 16:00:00 GMT"
132s [7] "2010-08-05 17:00:00 GMT" "2010-08-05 18:00:00 GMT"
132s [9] "2010-08-05 19:00:00 GMT"
132s 
132s > 
132s > 
132s > ###################################################
132s > ### chunk number 12: 
132s > ###################################################
132s > stidf[1:2,]
132s An object of class "STIDF"
132s Slot "data":
132s   values   ID
132s 1   10.7 ID 1
132s 2   19.8 ID 2
132s 
132s Slot "sp":
132s SpatialPoints:
132s        x y
132s point1 1 1
132s point2 2 1
132s Coordinate Reference System (CRS) arguments: NA 
132s 
132s Slot "time":
132s                     timeIndex
132s 2010-08-05 11:00:00         1
132s 2010-08-05 12:00:00         2
132s 
132s Slot "endTime":
132s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
132s 
132s > 
132s > 
132s > ###################################################
132s > ### chunk number 13: 
132s > ###################################################
132s > stfdf[,time[3]]
132s   coordinates values       ID   newVal   NewID
132s 1      (0, 0)   9.74 OldIDs10 -0.95252 NewIDs3
132s 2      (0, 1)  20.70 OldIDs11 -1.69971 NewIDs2
132s 3      (1, 1)  30.50 OldIDs12  0.89985 NewIDs1
132s > 
132s > 
132s > ###################################################
132s > ### chunk number 14: 
132s > ###################################################
132s > class(stfdf[,time[3],drop=FALSE])
132s [1] "STFDF"
132s attr(,"package")
132s [1] "spacetime"
132s > 
132s > ###################################################
132s > ### chunk number 15: 
132s > ###################################################
132s > stfdf[1, , "values"]
132s                     values timeIndex
132s 2010-08-05 10:00:00   8.77         1
132s 2010-08-05 11:00:00   8.47         2
132s 2010-08-05 12:00:00  10.80         3
132s 2010-08-05 13:00:00   9.74         4
132s > 
132s > ###################################################
132s > ### chunk number 16: 
132s > ###################################################
132s > class(stfdf[1,drop=FALSE])
132s [1] "STFDF"
132s attr(,"package")
132s [1] "spacetime"
132s > 
132s > 
132s > ###################################################
132s > ### chunk number 17: 
132s > ###################################################
132s > class(stfdf)
132s [1] "STFDF"
132s attr(,"package")
132s [1] "spacetime"
132s > class(as(stfdf, "STSDF"))
132s [1] "STSDF"
132s attr(,"package")
132s [1] "spacetime"
132s > class(as(as(stfdf, "STSDF"), "STIDF"))
132s [1] "STIDF"
132s attr(,"package")
132s [1] "spacetime"
132s > class(as(stfdf, "STIDF"))
132s [1] "STIDF"
132s attr(,"package")
132s [1] "spacetime"
132s > 
132s > 
132s > ###################################################
132s > ### chunk number 18: 
132s > ###################################################
132s > x = as(stfdf, "STIDF")
132s > class(as(x, "STSDF"))
132s [1] "STSDF"
132s attr(,"package")
132s [1] "spacetime"
132s > class(as(as(x, "STSDF"), "STFDF"))
132s [1] "STFDF"
132s attr(,"package")
132s [1] "spacetime"
132s > class(as(x, "STFDF"))
132s [1] "STFDF"
132s attr(,"package")
132s [1] "spacetime"
132s > xx = as(x, "STFDF")
132s > identical(stfdf, xx)
132s [1] TRUE
132s > 
132s > stsdf = as(stfdf, "STSDF")
132s > stsdf[[1]]
132s  [1]  8.77 18.70 29.70  8.47 21.10 32.50 10.80 20.20 29.00  9.74 20.70 30.50
132s > stsdf[["values"]]
132s  [1]  8.77 18.70 29.70  8.47 21.10 32.50 10.80 20.20 29.00  9.74 20.70 30.50
132s > stsdf[["newVal"]] <- rnorm(12)
132s > stsdf$ID
132s  [1] "OldIDs1"  "OldIDs2"  "OldIDs3"  "OldIDs4"  "OldIDs5"  "OldIDs6" 
132s  [7] "OldIDs7"  "OldIDs8"  "OldIDs9"  "OldIDs10" "OldIDs11" "OldIDs12"
132s > stsdf$ID = paste("OldIDs", 1:12, sep="")
132s > stsdf$NewID = paste("NewIDs", 12:1, sep="")
132s > stsdf
132s An object of class "STSDF"
132s Slot "data":
132s    values       ID   newVal    NewID
132s 1    8.77  OldIDs1 -1.24345 NewIDs12
132s 2   18.70  OldIDs2 -1.47698 NewIDs11
132s 3   29.70  OldIDs3 -0.84284 NewIDs10
132s 4    8.47  OldIDs4  1.54992  NewIDs9
132s 5   21.10  OldIDs5  1.04955  NewIDs8
132s 6   32.50  OldIDs6  1.35744  NewIDs7
132s 7   10.80  OldIDs7  1.33925  NewIDs6
132s 8   20.20  OldIDs8  0.77757  NewIDs5
132s 9   29.00  OldIDs9  0.39454  NewIDs4
132s 10   9.74 OldIDs10  0.15138  NewIDs3
132s 11  20.70 OldIDs11 -0.38780  NewIDs2
132s 12  30.50 OldIDs12  0.46815  NewIDs1
132s 
132s Slot "index":
132s       [,1] [,2]
132s  [1,]    1    1
132s  [2,]    2    1
132s  [3,]    3    1
132s  [4,]    1    2
132s  [5,]    2    2
132s  [6,]    3    2
132s  [7,]    1    3
132s  [8,]    2    3
132s  [9,]    3    3
132s [10,]    1    4
132s [11,]    2    4
132s [12,]    3    4
132s 
132s Slot "sp":
132s SpatialPoints:
132s        x y
132s point1 0 0
132s point2 0 1
132s point3 1 1
132s Coordinate Reference System (CRS) arguments: NA 
132s 
132s Slot "time":
132s                     timeIndex
132s 2010-08-05 10:00:00         1
132s 2010-08-05 11:00:00         2
132s 2010-08-05 12:00:00         3
132s 2010-08-05 13:00:00         4
132s 
132s Slot "endTime":
132s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
132s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
132s 
132s > stsdf[,1] # SpatialPointsDataFrame:
132s   coordinates values      ID   newVal    NewID
132s 1      (0, 0)   8.77 OldIDs1 -1.24345 NewIDs12
132s 2      (0, 1)  18.70 OldIDs2 -1.47698 NewIDs11
132s 3      (1, 1)  29.70 OldIDs3 -0.84284 NewIDs10
132s > stsdf[,,1]
132s An object of class "STSDF"
132s Slot "data":
132s    values
132s 1    8.77
132s 2   18.70
132s 3   29.70
132s 4    8.47
132s 5   21.10
132s 6   32.50
132s 7   10.80
132s 8   20.20
132s 9   29.00
132s 10   9.74
132s 11  20.70
132s 12  30.50
132s 
132s Slot "index":
132s       [,1] [,2]
132s  [1,]    1    1
132s  [2,]    2    1
132s  [3,]    3    1
132s  [4,]    1    2
132s  [5,]    2    2
132s  [6,]    3    2
132s  [7,]    1    3
132s  [8,]    2    3
132s  [9,]    3    3
132s [10,]    1    4
132s [11,]    2    4
132s [12,]    3    4
132s 
132s Slot "sp":
132s SpatialPoints:
132s        x y
132s point1 0 0
132s point2 0 1
132s point3 1 1
132s Coordinate Reference System (CRS) arguments: NA 
132s 
132s Slot "time":
132s                     timeIndex
132s 2010-08-05 10:00:00         1
132s 2010-08-05 11:00:00         2
132s 2010-08-05 12:00:00         3
132s 2010-08-05 13:00:00         4
132s 
132s Slot "endTime":
132s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
132s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
132s 
132s > stsdf[1,,1] # xts
132s                     values timeIndex
132s 2010-08-05 10:00:00   8.77         1
132s 2010-08-05 11:00:00   8.47         2
132s 2010-08-05 12:00:00  10.80         3
132s 2010-08-05 13:00:00   9.74         4
132s > stsdf[,,"ID"]
132s An object of class "STSDF"
132s Slot "data":
132s          ID
132s 1   OldIDs1
132s 2   OldIDs2
132s 3   OldIDs3
132s 4   OldIDs4
132s 5   OldIDs5
132s 6   OldIDs6
132s 7   OldIDs7
132s 8   OldIDs8
132s 9   OldIDs9
132s 10 OldIDs10
132s 11 OldIDs11
132s 12 OldIDs12
132s 
132s Slot "index":
132s       [,1] [,2]
132s  [1,]    1    1
132s  [2,]    2    1
132s  [3,]    3    1
132s  [4,]    1    2
132s  [5,]    2    2
132s  [6,]    3    2
132s  [7,]    1    3
132s  [8,]    2    3
132s  [9,]    3    3
132s [10,]    1    4
132s [11,]    2    4
132s [12,]    3    4
132s 
132s Slot "sp":
132s SpatialPoints:
132s        x y
132s point1 0 0
132s point2 0 1
132s point3 1 1
132s Coordinate Reference System (CRS) arguments: NA 
132s 
132s Slot "time":
132s                     timeIndex
132s 2010-08-05 10:00:00         1
132s 2010-08-05 11:00:00         2
132s 2010-08-05 12:00:00         3
132s 2010-08-05 13:00:00         4
132s 
132s Slot "endTime":
132s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
132s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
132s 
132s > stsdf[1,,"values", drop=FALSE] # stays STIDF:
132s An object of class "STSDF"
132s Slot "data":
132s    values
132s 1    8.77
132s 4    8.47
132s 7   10.80
132s 10   9.74
132s 
132s Slot "index":
132s      [,1] [,2]
132s [1,]    1    1
132s [2,]    1    2
132s [3,]    1    3
132s [4,]    1    4
132s 
132s Slot "sp":
132s SpatialPoints:
132s        x y
132s point1 0 0
132s Coordinate Reference System (CRS) arguments: NA 
132s 
132s Slot "time":
132s                     timeIndex
132s 2010-08-05 10:00:00         1
132s 2010-08-05 11:00:00         2
132s 2010-08-05 12:00:00         3
132s 2010-08-05 13:00:00         4
132s 
132s Slot "endTime":
132s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
132s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
132s 
132s > stsdf[,1, drop=FALSE] #stays STIDF
132s An object of class "STSDF"
132s Slot "data":
132s   values      ID   newVal    NewID
132s 1   8.77 OldIDs1 -1.24345 NewIDs12
132s 2  18.70 OldIDs2 -1.47698 NewIDs11
132s 3  29.70 OldIDs3 -0.84284 NewIDs10
132s 
132s Slot "index":
132s      [,1] [,2]
132s [1,]    1    1
132s [2,]    2    1
132s [3,]    3    1
132s 
132s Slot "sp":
132s SpatialPoints:
132s        x y
132s point1 0 0
132s point2 0 1
132s point3 1 1
132s Coordinate Reference System (CRS) arguments: NA 
132s 
132s Slot "time":
132s                     timeIndex
132s 2010-08-05 10:00:00         1
132s 
132s Slot "endTime":
132s [1] "2010-08-05 11:00:00 GMT"
132s 
132s > format(as.data.frame(stsdf), tz="GMT")
132s    x y  sp.ID                time             endTime timeIndex values       ID
132s 1  0 0 point1 2010-08-05 10:00:00 2010-08-05 11:00:00         1   8.77  OldIDs1
132s 2  0 1 point2 2010-08-05 10:00:00 2010-08-05 11:00:00         1  18.70  OldIDs2
132s 3  1 1 point3 2010-08-05 10:00:00 2010-08-05 11:00:00         1  29.70  OldIDs3
132s 4  0 0 point1 2010-08-05 11:00:00 2010-08-05 12:00:00         2   8.47  OldIDs4
132s 5  0 1 point2 2010-08-05 11:00:00 2010-08-05 12:00:00         2  21.10  OldIDs5
132s 6  1 1 point3 2010-08-05 11:00:00 2010-08-05 12:00:00         2  32.50  OldIDs6
132s 7  0 0 point1 2010-08-05 12:00:00 2010-08-05 13:00:00         3  10.80  OldIDs7
132s 8  0 1 point2 2010-08-05 12:00:00 2010-08-05 13:00:00         3  20.20  OldIDs8
132s 9  1 1 point3 2010-08-05 12:00:00 2010-08-05 13:00:00         3  29.00  OldIDs9
132s 10 0 0 point1 2010-08-05 13:00:00 2010-08-05 14:00:00         4   9.74 OldIDs10
132s 11 0 1 point2 2010-08-05 13:00:00 2010-08-05 14:00:00         4  20.70 OldIDs11
132s 12 1 1 point3 2010-08-05 13:00:00 2010-08-05 14:00:00         4  30.50 OldIDs12
132s      newVal    NewID
132s 1  -1.24345 NewIDs12
132s 2  -1.47698 NewIDs11
132s 3  -0.84284 NewIDs10
132s 4   1.54992  NewIDs9
132s 5   1.04955  NewIDs8
132s 6   1.35744  NewIDs7
132s 7   1.33925  NewIDs6
132s 8   0.77757  NewIDs5
132s 9   0.39454  NewIDs4
132s 10  0.15138  NewIDs3
132s 11 -0.38780  NewIDs2
132s 12  0.46815  NewIDs1
132s > format(as(stsdf, "data.frame"), tz="GMT")
132s    x y  sp.ID                time             endTime timeIndex values       ID
132s 1  0 0 point1 2010-08-05 10:00:00 2010-08-05 11:00:00         1   8.77  OldIDs1
132s 2  0 1 point2 2010-08-05 10:00:00 2010-08-05 11:00:00         1  18.70  OldIDs2
132s 3  1 1 point3 2010-08-05 10:00:00 2010-08-05 11:00:00         1  29.70  OldIDs3
132s 4  0 0 point1 2010-08-05 11:00:00 2010-08-05 12:00:00         2   8.47  OldIDs4
132s 5  0 1 point2 2010-08-05 11:00:00 2010-08-05 12:00:00         2  21.10  OldIDs5
132s 6  1 1 point3 2010-08-05 11:00:00 2010-08-05 12:00:00         2  32.50  OldIDs6
132s 7  0 0 point1 2010-08-05 12:00:00 2010-08-05 13:00:00         3  10.80  OldIDs7
132s 8  0 1 point2 2010-08-05 12:00:00 2010-08-05 13:00:00         3  20.20  OldIDs8
132s 9  1 1 point3 2010-08-05 12:00:00 2010-08-05 13:00:00         3  29.00  OldIDs9
132s 10 0 0 point1 2010-08-05 13:00:00 2010-08-05 14:00:00         4   9.74 OldIDs10
132s 11 0 1 point2 2010-08-05 13:00:00 2010-08-05 14:00:00         4  20.70 OldIDs11
132s 12 1 1 point3 2010-08-05 13:00:00 2010-08-05 14:00:00         4  30.50 OldIDs12
132s      newVal    NewID
132s 1  -1.24345 NewIDs12
132s 2  -1.47698 NewIDs11
132s 3  -0.84284 NewIDs10
132s 4   1.54992  NewIDs9
132s 5   1.04955  NewIDs8
132s 6   1.35744  NewIDs7
132s 7   1.33925  NewIDs6
132s 8   0.77757  NewIDs5
132s 9   0.39454  NewIDs4
132s 10  0.15138  NewIDs3
132s 11 -0.38780  NewIDs2
132s 12  0.46815  NewIDs1
132s > 
132s > stidf = as(stfdf, "STIDF")
132s > stidf[[1]]
132s  [1]  8.77 18.70 29.70  8.47 21.10 32.50 10.80 20.20 29.00  9.74 20.70 30.50
132s > stidf[["values"]]
132s  [1]  8.77 18.70 29.70  8.47 21.10 32.50 10.80 20.20 29.00  9.74 20.70 30.50
132s > stidf[["newVal"]] <- rnorm(12)
132s > stidf$ID
132s  [1] "OldIDs1"  "OldIDs2"  "OldIDs3"  "OldIDs4"  "OldIDs5"  "OldIDs6" 
132s  [7] "OldIDs7"  "OldIDs8"  "OldIDs9"  "OldIDs10" "OldIDs11" "OldIDs12"
132s > stidf$ID = paste("OldIDs", 1:12, sep="")
132s > stidf$NewID = paste("NewIDs", 12:1, sep="")
132s > stidf
132s An object of class "STIDF"
132s Slot "data":
132s    values       ID   newVal    NewID
132s 1    8.77  OldIDs1  1.67415 NewIDs12
132s 2   18.70  OldIDs2 -1.47819 NewIDs11
132s 3   29.70  OldIDs3 -1.63290 NewIDs10
132s 4    8.47  OldIDs4 -0.97491  NewIDs9
132s 5   21.10  OldIDs5 -0.76499  NewIDs8
132s 6   32.50  OldIDs6  0.10300  NewIDs7
132s 7   10.80  OldIDs7 -1.06830  NewIDs6
132s 8   20.20  OldIDs8  0.47947  NewIDs5
132s 9   29.00  OldIDs9  1.17482  NewIDs4
132s 10   9.74 OldIDs10  1.03354  NewIDs3
132s 11  20.70 OldIDs11  0.82826  NewIDs2
132s 12  30.50 OldIDs12 -0.75862  NewIDs1
132s 
132s Slot "sp":
132s SpatialPoints:
132s          x y
132s point1   0 0
132s point2   0 1
132s point3   1 1
132s point1.1 0 0
132s point2.1 0 1
132s point3.1 1 1
132s point1.2 0 0
132s point2.2 0 1
132s point3.2 1 1
132s point1.3 0 0
132s point2.3 0 1
132s point3.3 1 1
132s Coordinate Reference System (CRS) arguments: NA 
132s 
132s Slot "time":
132s                     timeIndex
132s 2010-08-05 10:00:00         1
132s 2010-08-05 10:00:00         1
132s 2010-08-05 10:00:00         1
132s 2010-08-05 11:00:00         2
132s 2010-08-05 11:00:00         2
132s 2010-08-05 11:00:00         2
132s 2010-08-05 12:00:00         3
132s 2010-08-05 12:00:00         3
132s 2010-08-05 12:00:00         3
132s 2010-08-05 13:00:00         4
132s 2010-08-05 13:00:00         4
132s 2010-08-05 13:00:00         4
132s 
132s Slot "endTime":
132s  [1] "2010-08-05 11:00:00 GMT" "2010-08-05 11:00:00 GMT"
132s  [3] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
132s  [5] "2010-08-05 12:00:00 GMT" "2010-08-05 12:00:00 GMT"
132s  [7] "2010-08-05 13:00:00 GMT" "2010-08-05 13:00:00 GMT"
132s  [9] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
132s [11] "2010-08-05 14:00:00 GMT" "2010-08-05 14:00:00 GMT"
132s 
132s > stidf[,1] # SpatialPointsDataFrame:
132s An object of class "STIDF"
132s Slot "data":
132s   values      ID newVal    NewID
132s 1   8.77 OldIDs1 1.6741 NewIDs12
132s 
132s Slot "sp":
132s SpatialPoints:
132s        x y
132s point1 0 0
132s Coordinate Reference System (CRS) arguments: NA 
132s 
132s Slot "time":
132s                     timeIndex
132s 2010-08-05 10:00:00         1
132s 
132s Slot "endTime":
132s [1] "2010-08-05 11:00:00 GMT"
132s 
132s > stidf[,,1]
132s An object of class "STIDF"
132s Slot "data":
132s    values
132s 1    8.77
132s 2   18.70
132s 3   29.70
132s 4    8.47
132s 5   21.10
132s 6   32.50
132s 7   10.80
132s 8   20.20
132s 9   29.00
132s 10   9.74
132s 11  20.70
132s 12  30.50
132s 
132s Slot "sp":
132s SpatialPoints:
132s          x y
132s point1   0 0
132s point2   0 1
132s point3   1 1
132s point1.1 0 0
132s point2.1 0 1
132s point3.1 1 1
132s point1.2 0 0
132s point2.2 0 1
132s point3.2 1 1
132s point1.3 0 0
132s point2.3 0 1
132s point3.3 1 1
132s Coordinate Reference System (CRS) arguments: NA 
132s 
132s Slot "time":
132s                     timeIndex
132s 2010-08-05 10:00:00         1
132s 2010-08-05 10:00:00         1
132s 2010-08-05 10:00:00         1
132s 2010-08-05 11:00:00         2
132s 2010-08-05 11:00:00         2
132s 2010-08-05 11:00:00         2
132s 2010-08-05 12:00:00         3
132s 2010-08-05 12:00:00         3
132s 2010-08-05 12:00:00         3
132s 2010-08-05 13:00:00         4
132s 2010-08-05 13:00:00         4
132s 2010-08-05 13:00:00         4
132s 
132s Slot "endTime":
132s  [1] "2010-08-05 11:00:00 GMT" "2010-08-05 11:00:00 GMT"
132s  [3] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
132s  [5] "2010-08-05 12:00:00 GMT" "2010-08-05 12:00:00 GMT"
132s  [7] "2010-08-05 13:00:00 GMT" "2010-08-05 13:00:00 GMT"
132s  [9] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
132s [11] "2010-08-05 14:00:00 GMT" "2010-08-05 14:00:00 GMT"
132s 
132s > stidf[1,,1] # xts
132s An object of class "STIDF"
132s Slot "data":
132s   values
132s 1   8.77
132s 
132s Slot "sp":
132s SpatialPoints:
132s        x y
132s point1 0 0
132s Coordinate Reference System (CRS) arguments: NA 
132s 
132s Slot "time":
132s                     timeIndex
132s 2010-08-05 10:00:00         1
132s 
132s Slot "endTime":
132s [1] "2010-08-05 11:00:00 GMT"
132s 
132s > stidf[,,"ID"]
132s An object of class "STIDF"
132s Slot "data":
132s          ID
132s 1   OldIDs1
132s 2   OldIDs2
132s 3   OldIDs3
132s 4   OldIDs4
132s 5   OldIDs5
132s 6   OldIDs6
132s 7   OldIDs7
132s 8   OldIDs8
132s 9   OldIDs9
132s 10 OldIDs10
132s 11 OldIDs11
132s 12 OldIDs12
132s 
132s Slot "sp":
132s SpatialPoints:
132s          x y
132s point1   0 0
132s point2   0 1
132s point3   1 1
132s point1.1 0 0
132s point2.1 0 1
132s point3.1 1 1
132s point1.2 0 0
132s point2.2 0 1
132s point3.2 1 1
132s point1.3 0 0
132s point2.3 0 1
132s point3.3 1 1
132s Coordinate Reference System (CRS) arguments: NA 
132s 
132s Slot "time":
132s                     timeIndex
132s 2010-08-05 10:00:00         1
132s 2010-08-05 10:00:00         1
132s 2010-08-05 10:00:00         1
132s 2010-08-05 11:00:00         2
132s 2010-08-05 11:00:00         2
132s 2010-08-05 11:00:00         2
132s 2010-08-05 12:00:00         3
132s 2010-08-05 12:00:00         3
132s 2010-08-05 12:00:00         3
132s 2010-08-05 13:00:00         4
132s 2010-08-05 13:00:00         4
132s 2010-08-05 13:00:00         4
132s 
132s Slot "endTime":
132s  [1] "2010-08-05 11:00:00 GMT" "2010-08-05 11:00:00 GMT"
132s  [3] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT"
132s  [5] "2010-08-05 12:00:00 GMT" "2010-08-05 12:00:00 GMT"
132s  [7] "2010-08-05 13:00:00 GMT" "2010-08-05 13:00:00 GMT"
132s  [9] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT"
132s [11] "2010-08-05 14:00:00 GMT" "2010-08-05 14:00:00 GMT"
132s 
132s > stidf[1,,"values", drop=FALSE] # stays STIDF:
132s An object of class "STIDF"
132s Slot "data":
132s   values
132s 1   8.77
132s 
132s Slot "sp":
132s SpatialPoints:
132s        x y
132s point1 0 0
132s Coordinate Reference System (CRS) arguments: NA 
132s 
132s Slot "time":
132s                     timeIndex
132s 2010-08-05 10:00:00         1
132s 
132s Slot "endTime":
132s [1] "2010-08-05 11:00:00 GMT"
132s 
132s > stidf[,1, drop=FALSE] #stays STIDF
132s An object of class "STIDF"
132s Slot "data":
132s   values      ID newVal    NewID
132s 1   8.77 OldIDs1 1.6741 NewIDs12
132s 
132s Slot "sp":
132s SpatialPoints:
132s        x y
132s point1 0 0
132s Coordinate Reference System (CRS) arguments: NA 
132s 
132s Slot "time":
132s                     timeIndex
132s 2010-08-05 10:00:00         1
132s 
132s Slot "endTime":
132s [1] "2010-08-05 11:00:00 GMT"
132s 
132s > format(as.data.frame(stidf), tz="GMT")
132s    x y    sp.ID                time             endTime timeIndex values
132s 1  0 0   point1 2010-08-05 10:00:00 2010-08-05 11:00:00         1   8.77
132s 2  0 1   point2 2010-08-05 10:00:00 2010-08-05 11:00:00         1  18.70
132s 3  1 1   point3 2010-08-05 10:00:00 2010-08-05 11:00:00         1  29.70
132s 4  0 0 point1.1 2010-08-05 11:00:00 2010-08-05 12:00:00         2   8.47
132s 5  0 1 point2.1 2010-08-05 11:00:00 2010-08-05 12:00:00         2  21.10
132s 6  1 1 point3.1 2010-08-05 11:00:00 2010-08-05 12:00:00         2  32.50
132s 7  0 0 point1.2 2010-08-05 12:00:00 2010-08-05 13:00:00         3  10.80
132s 8  0 1 point2.2 2010-08-05 12:00:00 2010-08-05 13:00:00         3  20.20
132s 9  1 1 point3.2 2010-08-05 12:00:00 2010-08-05 13:00:00         3  29.00
132s 10 0 0 point1.3 2010-08-05 13:00:00 2010-08-05 14:00:00         4   9.74
132s 11 0 1 point2.3 2010-08-05 13:00:00 2010-08-05 14:00:00         4  20.70
132s 12 1 1 point3.3 2010-08-05 13:00:00 2010-08-05 14:00:00         4  30.50
132s          ID   newVal    NewID
132s 1   OldIDs1  1.67415 NewIDs12
132s 2   OldIDs2 -1.47819 NewIDs11
132s 3   OldIDs3 -1.63290 NewIDs10
132s 4   OldIDs4 -0.97491  NewIDs9
132s 5   OldIDs5 -0.76499  NewIDs8
132s 6   OldIDs6  0.10300  NewIDs7
132s 7   OldIDs7 -1.06830  NewIDs6
132s 8   OldIDs8  0.47947  NewIDs5
132s 9   OldIDs9  1.17482  NewIDs4
132s 10 OldIDs10  1.03354  NewIDs3
132s 11 OldIDs11  0.82826  NewIDs2
132s 12 OldIDs12 -0.75862  NewIDs1
132s > format(as(stidf, "data.frame"), tz="GMT")
132s    x y    sp.ID                time             endTime timeIndex values
132s 1  0 0   point1 2010-08-05 10:00:00 2010-08-05 11:00:00         1   8.77
132s 2  0 1   point2 2010-08-05 10:00:00 2010-08-05 11:00:00         1  18.70
132s 3  1 1   point3 2010-08-05 10:00:00 2010-08-05 11:00:00         1  29.70
132s 4  0 0 point1.1 2010-08-05 11:00:00 2010-08-05 12:00:00         2   8.47
132s 5  0 1 point2.1 2010-08-05 11:00:00 2010-08-05 12:00:00         2  21.10
132s 6  1 1 point3.1 2010-08-05 11:00:00 2010-08-05 12:00:00         2  32.50
132s 7  0 0 point1.2 2010-08-05 12:00:00 2010-08-05 13:00:00         3  10.80
132s 8  0 1 point2.2 2010-08-05 12:00:00 2010-08-05 13:00:00         3  20.20
132s 9  1 1 point3.2 2010-08-05 12:00:00 2010-08-05 13:00:00         3  29.00
132s 10 0 0 point1.3 2010-08-05 13:00:00 2010-08-05 14:00:00         4   9.74
132s 11 0 1 point2.3 2010-08-05 13:00:00 2010-08-05 14:00:00         4  20.70
132s 12 1 1 point3.3 2010-08-05 13:00:00 2010-08-05 14:00:00         4  30.50
132s          ID   newVal    NewID
132s 1   OldIDs1  1.67415 NewIDs12
132s 2   OldIDs2 -1.47819 NewIDs11
132s 3   OldIDs3 -1.63290 NewIDs10
132s 4   OldIDs4 -0.97491  NewIDs9
132s 5   OldIDs5 -0.76499  NewIDs8
132s 6   OldIDs6  0.10300  NewIDs7
132s 7   OldIDs7 -1.06830  NewIDs6
132s 8   OldIDs8  0.47947  NewIDs5
132s 9   OldIDs9  1.17482  NewIDs4
132s 10 OldIDs10  1.03354  NewIDs3
132s 11 OldIDs11  0.82826  NewIDs2
132s 12 OldIDs12 -0.75862  NewIDs1
132s > 
132s > sp = cbind(x = c(0,0,1), y = c(0,1,1))
132s > row.names(sp) = paste("point", 1:nrow(sp), sep="")
132s > sp = SpatialPoints(sp)
132s > library(xts)
132s Loading required package: zoo
132s > time = xts(1:4, as.POSIXct("2010-08-05", tz="GMT")+3600*(10:13))
132s > mydata = rnorm(length(sp)*length(time),mean=rep(m, 4))
132s > IDs = paste("ID", 1:length(mydata), sep = "_")
132s > mydata = data.frame(values = signif(mydata,3), ID=IDs)
132s > spx = SpatialPointsDataFrame(sp, data.frame(values = c("a", "b", "c")))
132s > try(stfdf <- STFDF(spx, time, mydata))
132s 
132s Attaching package: ‘zoo’
132s 
132s The following objects are masked from ‘package:base’:
132s 
132s     as.Date, as.Date.numeric
132s 
132s > timex = time
132s > names(timex) = "values"
132s Error in .checkAttrIsUnique(object@sp, object@time, object@data) : 
132s   name conflict: attribute name(s) in data already present in sp slot of ST object
132s > try(stfdf <- STFDF(sp, timex, mydata))
132s Error in .checkAttrIsUnique(object@sp, object@time, object@data) : 
132s   name conflict: attribute name(s) in data already present in time slot of ST object
132s > mydatax = mydata
132s > names(mydatax) = "x"
132s > try(stfdf <- STFDF(spx, timex, mydatax))
132s Error in validityMethod(object) : 
132s   name conflict: attribute names in sp and time slot must differ
132s > stfdf = STFDF(sp, timex, mydatax)
132s > try(stfdf[["values"]] <- 1:12)
132s Error in .checkAttrIsUnique(x@sp, x@time, x@data) : 
132s   name conflict: attribute name(s) in data already present in time slot of ST object
132s > stfdf = STFDF(spx, time, mydatax)
132s > try(stfdf[["values"]] <- 1:12)
132s Error in .checkAttrIsUnique(x@sp, x@time, x@data) : 
132s   name conflict: attribute name(s) in data already present in sp slot of ST object
132s > 
132s BEGIN TEST over.R
132s 
132s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
132s Copyright (C) 2024 The R Foundation for Statistical Computing
132s Platform: x86_64-pc-linux-gnu
132s 
132s R is free software and comes with ABSOLUTELY NO WARRANTY.
132s You are welcome to redistribute it under certain conditions.
132s Type 'license()' or 'licence()' for distribution details.
132s 
132s R is a collaborative project with many contributors.
132s Type 'contributors()' for more information and
132s 'citation()' on how to cite R or R packages in publications.
132s 
132s Type 'demo()' for some demos, 'help()' for on-line help, or
132s 'help.start()' for an HTML browser interface to help.
132s Type 'q()' to quit R.
132s 
132s > require(sp)
132s Loading required package: sp
132s > require(spacetime)
132s Loading required package: spacetime
133s > options(xts_check_TZ=FALSE)
133s > 
133s > # go through time matching first:
133s > x = as.POSIXct("2000-01-01", tz="GMT") + (0:9) * 3600
133s > y = x + 1
133s > y[1] = y[2]
133s > format(x, tz="GMT")
133s  [1] "2000-01-01 00:00:00" "2000-01-01 01:00:00" "2000-01-01 02:00:00"
133s  [4] "2000-01-01 03:00:00" "2000-01-01 04:00:00" "2000-01-01 05:00:00"
133s  [7] "2000-01-01 06:00:00" "2000-01-01 07:00:00" "2000-01-01 08:00:00"
133s [10] "2000-01-01 09:00:00"
133s > format(y, tz="GMT")
133s  [1] "2000-01-01 01:00:01" "2000-01-01 01:00:01" "2000-01-01 02:00:01"
133s  [4] "2000-01-01 03:00:01" "2000-01-01 04:00:01" "2000-01-01 05:00:01"
133s  [7] "2000-01-01 06:00:01" "2000-01-01 07:00:01" "2000-01-01 08:00:01"
133s [10] "2000-01-01 09:00:01"
133s > end.x = delta(x)
133s > end.y = delta(y)
133s > timeMatch(y, y)
133s  [1]  1  1  3  4  5  6  7  8  9 10
133s > timeMatch(y, y, end.x = end.y, end.y = end.y)
133s Warning messages:
133s 1: Some empty 'to' intervals encountered. Setting to NA... 
133s 2: Some empty 'from' intervals encountered. Setting to NA... 
133s  [1] NA  2  3  4  5  6  7  8  9 10
133s > 
133s > timeMatch(x, y)
133s  [1] NA NA NA NA NA NA NA NA NA NA
133s > timeMatch(x, y, end.y = end.y)
133s  [1] NA NA  2  3  4  5  6  7  8  9
133s > timeMatch(x, y, end.x = end.x)
133s Warning message:
133s Some empty 'to' intervals encountered. Setting to NA... 
133s  [1] NA  1  3  4  5  6  7  8  9 10
133s > timeMatch(x, y, end.x = end.x, end.y = end.y)
133s Warning message:
133s Some empty 'to' intervals encountered. Setting to NA... 
133s  [1] NA  2  2  3  4  5  6  7  8  9
133s > 
133s > timeMatch(x, y, returnList = TRUE)
133s [[1]]
133s integer(0)
133s 
133s [[2]]
133s integer(0)
133s 
133s [[3]]
133s integer(0)
133s 
133s [[4]]
133s integer(0)
133s 
133s [[5]]
133s integer(0)
133s 
133s [[6]]
133s integer(0)
133s 
133s [[7]]
133s integer(0)
133s 
133s [[8]]
133s integer(0)
133s 
133s [[9]]
133s integer(0)
133s 
133s [[10]]
133s integer(0)
133s 
133s > timeMatch(x, y, returnList = TRUE, end.y = end.y)
133s Warning message:
133s Some empty 'to' intervals encountered. Setting to NA... 
133s [[1]]
133s integer(0)
133s 
133s [[2]]
133s integer(0)
133s 
133s [[3]]
133s [1] 2
133s 
133s [[4]]
133s [1] 3
133s 
133s [[5]]
133s [1] 4
133s 
133s [[6]]
133s [1] 5
133s 
133s [[7]]
133s [1] 6
133s 
133s [[8]]
133s [1] 7
133s 
133s [[9]]
133s [1] 8
133s 
133s [[10]]
133s [1] 9
133s 
133s > timeMatch(x, y, returnList = TRUE, end.x = end.x)
133s [[1]]
133s integer(0)
133s 
133s [[2]]
133s [1] 1 2
133s 
133s [[3]]
133s [1] 3
133s 
133s [[4]]
133s [1] 4
133s 
133s [[5]]
133s [1] 5
133s 
133s [[6]]
133s [1] 6
133s 
133s [[7]]
133s [1] 7
133s 
133s [[8]]
133s [1] 8
133s 
133s [[9]]
133s [1] 9
133s 
133s [[10]]
133s [1] 10
133s 
133s > timeMatch(x, y, returnList = TRUE, end.x = end.x, end.y = end.y)
133s [[1]]
133s integer(0)
133s 
133s [[2]]
133s [1] 2
133s 
133s [[3]]
133s [1] 2 3
133s 
133s [[4]]
133s [1] 3 4
133s 
133s [[5]]
133s [1] 4 5
133s 
133s [[6]]
133s [1] 5 6
133s 
133s [[7]]
133s [1] 6 7
133s 
133s [[8]]
133s [1] 7 8
133s 
133s [[9]]
133s [1] 8 9
133s 
133s [[10]]
133s [1]  9 10
133s 
133s > 
133s > end.x = delta(x)
133s Warning message:
133s Some empty 'to' intervals encountered. Setting to NA... 
133s > y = x + 1 # don't replicate the first
133s > end.y = delta(y)
133s > 
133s > a = timeMatch(x, y, end.x = end.x, end.y = end.y)
133s > library(intervals)
133s > b = timeMatch(x, y, end.x = end.x, end.y = end.y)
133s > detach()
133s > all.equal(a, b)
133s [1] TRUE
133s > 
133s > a = timeMatch(x, y, end.y = end.y)
133s > library(intervals)
133s > b = timeMatch(x, y, end.y = end.y)
133s > detach()
133s > all.equal(a, b)
133s [1] TRUE
133s > 
133s > a = timeMatch(x, y, end.x = end.x)
133s > library(intervals)
133s > b = timeMatch(x, y, end.x = end.x)
133s > detach()
133s > all.equal(a, b)
133s [1] TRUE
133s > 
133s > # with end points:
133s > 
133s > # next, try ST?DF objects:
133s > t = as.POSIXct("2010-05-01", tz="GMT")+3600*1:10
133s > xy = SpatialPixels(SpatialPoints(expand.grid(1:10,1:10)))
133s > y = STFDF(xy, t, data.frame(a = 1:1000))
133s > stplot(y)
133s > x = y
133s > all(over(x, y) == 1:1000)
133s [1] TRUE
133s > 
133s > t0 = c(t[1]-1,t[c(2,4,10)]) # c() drops TZ?
133s > attr(t0, "tzone") = attr(t, "tzone")
133s > x = c(4,5,6,8)
133s > xy = SpatialPixels(SpatialPoints(expand.grid(x,rep(1,4))))
133s Warning messages:
133s 1: In points2grid(points, tolerance, round) :
133s   grid has empty column/rows in dimension 1
133s 2: In points2grid(points, tolerance, round) :
133s   cell size from constant coordinate 2 possibly taken from other coordinate
133s > x = STFDF(xy, t0, data.frame(a = 1:64))
133s > over(x, y)
133s      a
133s 1    4
133s 2    5
133s 3    6
133s 4    8
133s 5    4
133s 6    5
133s 7    6
133s 8    8
133s 9    4
133s 10   5
133s 11   6
133s 12   8
133s 13   4
133s 14   5
133s 15   6
133s 16   8
133s 17 104
133s 18 105
133s 19 106
133s 20 108
133s 21 104
133s 22 105
133s 23 106
133s 24 108
133s 25 104
133s 26 105
133s 27 106
133s 28 108
133s 29 104
133s 30 105
133s 31 106
133s 32 108
133s 33 304
133s 34 305
133s 35 306
133s 36 308
133s 37 304
133s 38 305
133s 39 306
133s 40 308
133s 41 304
133s 42 305
133s 43 306
133s 44 308
133s 45 304
133s 46 305
133s 47 306
133s 48 308
133s 49 904
133s 50 905
133s 51 906
133s 52 908
133s 53 904
133s 54 905
133s 55 906
133s 56 908
133s 57 904
133s 58 905
133s 59 906
133s 60 908
133s 61 904
133s 62 905
133s 63 906
133s 64 908
133s > 
133s > x = as(x, "STSDF")
133s > over(x, y)
133s      a
133s 1    4
133s 2    5
133s 3    6
133s 4    8
133s 5    4
133s 6    5
133s 7    6
133s 8    8
133s 9    4
133s 10   5
133s 11   6
133s 12   8
133s 13   4
133s 14   5
133s 15   6
133s 16   8
133s 17 104
133s 18 105
133s 19 106
133s 20 108
133s 21 104
133s 22 105
133s 23 106
133s 24 108
133s 25 104
133s 26 105
133s 27 106
133s 28 108
133s 29 104
133s 30 105
133s 31 106
133s 32 108
133s 33 304
133s 34 305
133s 35 306
133s 36 308
133s 37 304
133s 38 305
133s 39 306
133s 40 308
133s 41 304
133s 42 305
133s 43 306
133s 44 308
133s 45 304
133s 46 305
133s 47 306
133s 48 308
133s 49 904
133s 50 905
133s 51 906
133s 52 908
133s 53 904
133s 54 905
133s 55 906
133s 56 908
133s 57 904
133s 58 905
133s 59 906
133s 60 908
133s 61 904
133s 62 905
133s 63 906
133s 64 908
133s > 
133s > xy = SpatialPoints(cbind(c(1,3,5,10),c(5, 3, 8, 2)))
133s > x = STIDF(xy, t0, data.frame(a = 1:4))
133s > over(x,y)
133s     a
133s 1  NA
133s 2 123
133s 3 375
133s 4 920
133s > 
133s > t1 = c(t[1]-1,t[c(2,2,10)])
133s > attr(t1, "tzone") = attr(t, "tzone")
133s > x1 = STIDF(xy[c(1,2,2,4)], t1, data.frame(a = 1:4))
133s > 
133s > over(x1, x)
133s   a
133s 1 1
133s 2 2
133s 3 2
133s 4 4
133s > over(x, x1)
133s    a
133s 1  1
133s 2  2
133s 3 NA
133s 4  4
133s > over(x1, x, returnList = TRUE)
133s [[1]]
133s   a
133s 1 1
133s 
133s [[2]]
133s   a
133s 2 2
133s 
133s [[3]]
133s   a
133s 2 2
133s 
133s [[4]]
133s   a
133s 4 4
133s 
133s > over(x, x1, returnList = TRUE)
133s [[1]]
133s   a
133s 1 1
133s 
133s [[2]]
133s   a
133s 2 2
133s 4 4
133s 
133s [[3]]
133s [1] a
133s <0 rows> (or 0-length row.names)
133s 
133s [[4]]
133s   a
133s 4 4
133s 
133s > 
133s BEGIN TEST raster.R
133s 
133s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
133s Copyright (C) 2024 The R Foundation for Statistical Computing
133s Platform: x86_64-pc-linux-gnu
133s 
133s R is free software and comes with ABSOLUTELY NO WARRANTY.
133s You are welcome to redistribute it under certain conditions.
133s Type 'license()' or 'licence()' for distribution details.
133s 
133s R is a collaborative project with many contributors.
133s Type 'contributors()' for more information and
133s 'citation()' on how to cite R or R packages in publications.
133s 
133s Type 'demo()' for some demos, 'help()' for on-line help, or
133s 'help.start()' for an HTML browser interface to help.
133s Type 'q()' to quit R.
133s 
133s > library(spacetime)
134s > if (require(raster, quietly = TRUE)) {
134s +  x <- brick(system.file("external/rlogo.grd", package="raster"))
134s +  x <- setZ(x, as.Date(1:nlayers(x), origin = "1970-01-01"))
134s +  stplot(x)
134s + }
135s code for methods in class “Rcpp_SpatCategories” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatCategories” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatDataFrame” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatDataFrame” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatExtent” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatExtent” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatFactor” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatFactor” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatGraph” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatGraph” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatMessages” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatMessages” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatOptions” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatOptions” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatRaster” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatRaster” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatRasterCollection” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatRasterCollection” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatRasterStack” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatRasterStack” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatSRS” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatSRS” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatTime_v” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatTime_v” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatVector” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatVector” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatVectorCollection” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatVectorCollection” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatVectorProxy” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
135s code for methods in class “Rcpp_SpatVectorProxy” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
136s code for methods in class “Rcpp_SpExtent” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
136s code for methods in class “Rcpp_SpExtent” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
136s code for methods in class “Rcpp_SpPoly” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
136s code for methods in class “Rcpp_SpPoly” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
136s code for methods in class “Rcpp_SpPolyPart” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
136s code for methods in class “Rcpp_SpPolyPart” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
136s code for methods in class “Rcpp_SpPolygons” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
136s code for methods in class “Rcpp_SpPolygons” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
137s > 
137s BEGIN TEST rw.R
137s 
137s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
137s Copyright (C) 2024 The R Foundation for Statistical Computing
137s Platform: x86_64-pc-linux-gnu
137s 
137s R is free software and comes with ABSOLUTELY NO WARRANTY.
137s You are welcome to redistribute it under certain conditions.
137s Type 'license()' or 'licence()' for distribution details.
137s 
137s R is a collaborative project with many contributors.
137s Type 'contributors()' for more information and
137s 'citation()' on how to cite R or R packages in publications.
137s 
137s Type 'demo()' for some demos, 'help()' for on-line help, or
137s 'help.start()' for an HTML browser interface to help.
137s Type 'q()' to quit R.
137s 
137s > suppressPackageStartupMessages(library(sp))
137s > suppressPackageStartupMessages(library(spacetime))
138s > 
138s > m = 3# nr of trajectories
138s > n = 100 # length of each
138s > l = vector("list", m)
138s > t0 = as.POSIXct("2013-05-05",tz="GMT")
138s > set.seed(1331)
138s > for (i in 1:m) {
138s +     x = cumsum(rnorm(n))
138s +     y = cumsum(rnorm(n))
138s +     sp = SpatialPoints(cbind(x,y))
138s +     #t = t0 + (0:(n-1) + (i-1)*n) * 60
138s +     t = t0 + (0:(n-1) + (i-1)*n/2) * 60
138s +     l[[i]] = STI(sp, t)
138s + }
138s > stt= STT(l)
138s > sttdf = STTDF(stt, data.frame(attr = rnorm(n*m), id = paste("ID", rep(1:m, each=n))))
138s > x = as(stt, "STI")
138s > stplot(sttdf, col=1:m, scales=list(draw=TRUE))
138s > stplot(sttdf, by = "id")
138s > stplot(sttdf[1])
138s > stplot(sttdf[1])
138s > 
138s > p = Polygon(cbind(x=c(-20,-15,-15,-20,-20),y=c(10,10,15,15,10)))
138s > pol=SpatialPolygons(list(Polygons(list(p), "ID")))
138s > #if (require(rgeos, quietly = TRUE)) {
138s > #  stplot(sttdf[pol])
138s > #  names(sttdf[pol]@traj)
138s > #  stplot(sttdf[1:2],col=1:2)
138s > #  stplot(sttdf[,t0])
138s > #  stplot(sttdf[,"2013"])
138s > #  stplot(sttdf[pol,"2013"])
138s > #  is.null(sttdf[pol,t0])
138s > #}
138s > 
138s BEGIN TEST stconstruct.R
138s 
138s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
138s Copyright (C) 2024 The R Foundation for Statistical Computing
138s Platform: x86_64-pc-linux-gnu
138s 
138s R is free software and comes with ABSOLUTELY NO WARRANTY.
138s You are welcome to redistribute it under certain conditions.
138s Type 'license()' or 'licence()' for distribution details.
138s 
138s R is a collaborative project with many contributors.
138s Type 'contributors()' for more information and
138s 'citation()' on how to cite R or R packages in publications.
138s 
138s Type 'demo()' for some demos, 'help()' for on-line help, or
138s 'help.start()' for an HTML browser interface to help.
138s Type 'q()' to quit R.
138s 
138s > suppressPackageStartupMessages(library(sp))
138s > suppressPackageStartupMessages(library(spacetime))
138s > suppressPackageStartupMessages(library(xts))
138s > 
138s > # example 0: construction with STFDF:
138s > 
138s > ## IGNORE_RDIFF_BEGIN
138s > if (require(maps, quietly = TRUE)) {
138s + states.m = map('state', plot=FALSE, fill=TRUE)
138s + IDs <- sapply(strsplit(states.m$names, ":"), function(x) x[1])
138s +     
138s + if (require(sf, quietly = TRUE)) {
138s + sta = st_as_sf(states.m)
138s + row.names(sta) = unique(IDs)
138s + states = geometry(as(sta, "Spatial"))
138s + 
138s + if (require(plm, quietly = TRUE)) {
138s + data(Produc)
138s + 
138s + yrs = 1970:1986
138s + time = xts(1:17, as.POSIXct(paste(yrs, "-01-01", sep=""), tz = "GMT"))
138s + # deselect District of Columbia, polygon 8, which is not present in Produc:
138s + Produc.st = STFDF(states[-8], time, Produc[(order(Produc[,2], Produc[,1])),])
138s + #stplot(Produc.st[,,"unemp"], yrs)
138s + 
138s + # example 1: st from long table, with states as Spatial object:
138s + # use Date format for time:
138s + Produc$time = as.Date(paste(yrs, "01", "01", sep = "-"))
138s + xy = coordinates(states[-8])
138s + Produc$x = xy[,1]
138s + Produc$y = xy[,2]
138s + #using stConstruct, use polygon centroids for location:
138s + x = stConstruct(Produc, c("x", "y"), "time")
138s + class(x)
138s + stplot(x[,,"unemp"])
138s + 
138s + # alternatively, pass states:
138s + Produc$state = gsub("TENNESSE", "TENNESSEE", Produc$state)
138s + Produc$State = gsub("_", " ", tolower(Produc$state))
138s + x = stConstruct(Produc, "State", "time", states[-8])
138s + class(x)
138s + #stplot(x[,,"unemp"], yrs)
138s + 
138s + if (require(sf, quietly = TRUE)) {
138s + # stConstruct multivariable, time-wide
138s + fname = system.file("shape/nc.shp", package="sf")[1]
138s + nc = as(read_sf(fname), "Spatial")
138s + timesList = list(
138s + 	BIR=c("BIR74", "BIR79"), 
138s + 	NWBIR=c("NWBIR74", "NWBIR79"), 
138s + 	SID=c("SID74", "SID79")
138s + )
138s + t = xts(1:2, as.Date(c("1974-01-01","1979-01-01")))
138s + nc.st = stConstruct(as(nc, "data.frame"), geometry(nc), timesList,
138s + 	TimeObj = t)
138s + }
138s + }}}
139s Linking to GEOS 3.13.0, GDAL 3.9.3, PROJ 9.4.0; sf_use_s2() is TRUE
139s WARNING: different compile-time and runtime versions for GEOS found:
139s Linked against: 3.13.0-CAPI-1.19.0 compiled against: 3.12.1-CAPI-1.18.1
139s It is probably a good idea to reinstall sf (and maybe lwgeom too)
139s Error in process_cpl_read_ogr(x, quiet, check_ring_dir = check_ring_dir,  : 
139s   package tibble not available: install first?
139s Calls: as ... st_read -> st_read.character -> process_cpl_read_ogr
139s Execution halted
139s autopkgtest [20:51:43]: test run-unit-test: -----------------------]
140s run-unit-test        FAIL non-zero exit status 1
140s autopkgtest [20:51:44]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
140s autopkgtest [20:51:44]: test pkg-r-autopkgtest: preparing testbed
192s autopkgtest [20:52:36]: testbed dpkg architecture: amd64
192s autopkgtest [20:52:36]: testbed apt version: 2.9.8
192s autopkgtest [20:52:36]: @@@@@@@@@@@@@@@@@@@@ test bed setup
193s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB]
193s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9704 B]
193s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [925 kB]
194s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [53.2 kB]
194s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [13.6 kB]
194s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [89.4 kB]
194s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [41.5 kB]
194s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted i386 Packages [2408 B]
194s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [40.1 kB]
194s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [290 kB]
194s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [800 kB]
194s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [5528 B]
194s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [20.0 kB]
194s Fetched 2364 kB in 1s (2776 kB/s)
194s Reading package lists...
196s Reading package lists...
196s Building dependency tree...
196s Reading state information...
196s Calculating upgrade...
197s The following package was automatically installed and is no longer required:
197s   libsgutils2-1.46-2
197s Use 'sudo apt autoremove' to remove it.
197s The following NEW packages will be installed:
197s   libsgutils2-1.48
197s The following packages will be upgraded:
197s   amd64-microcode bash bpftrace curl debconf debconf-i18n distro-info
197s   dracut-install fwupd-signed gir1.2-girepository-2.0 gir1.2-glib-2.0 hostname
197s   intel-microcode libaudit-common libaudit1 libcurl3t64-gnutls libcurl4t64
197s   libgirepository-1.0-1 libglib2.0-0t64 libglib2.0-data libpam-modules
197s   libpam-modules-bin libpam-runtime libpam0g libplymouth5 libselinux1
197s   libsemanage-common libsemanage2 linux-base lxd-installer openssh-client
197s   openssh-server openssh-sftp-server pinentry-curses plymouth
197s   plymouth-theme-ubuntu-text python3-blinker python3-dbus python3-debconf
197s   python3-gi python3-jsonschema-specifications python3-rpds-py python3-yaml
197s   sg3-utils sg3-utils-udev vim-common vim-tiny xxd
197s 48 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
197s Need to get 19.9 MB of archives.
197s After this operation, 4454 kB of additional disk space will be used.
197s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 bash amd64 5.2.32-1ubuntu2 [918 kB]
197s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 hostname amd64 3.25 [11.1 kB]
197s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit-common all 1:4.0.2-2ubuntu1 [6578 B]
197s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit1 amd64 1:4.0.2-2ubuntu1 [53.9 kB]
197s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 debconf-i18n all 1.5.87ubuntu1 [204 kB]
197s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-debconf all 1.5.87ubuntu1 [4156 B]
197s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 debconf all 1.5.87ubuntu1 [124 kB]
197s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam0g amd64 1.5.3-7ubuntu4 [69.6 kB]
197s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libselinux1 amd64 3.7-3ubuntu1 [86.9 kB]
197s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-modules-bin amd64 1.5.3-7ubuntu4 [53.7 kB]
197s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-modules amd64 1.5.3-7ubuntu4 [294 kB]
197s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-sftp-server amd64 1:9.9p1-3ubuntu2 [41.2 kB]
197s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-server amd64 1:9.9p1-3ubuntu2 [625 kB]
197s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-client amd64 1:9.9p1-3ubuntu2 [1080 kB]
197s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-runtime all 1.5.3-7ubuntu4 [40.8 kB]
197s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage-common all 3.7-2build1 [7186 B]
197s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage2 amd64 3.7-2build1 [105 kB]
197s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 distro-info amd64 1.12 [20.0 kB]
197s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-girepository-2.0 amd64 1.82.0-2 [25.3 kB]
197s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-glib-2.0 amd64 2.82.2-3 [182 kB]
197s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-0t64 amd64 2.82.2-3 [1655 kB]
197s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libgirepository-1.0-1 amd64 1.82.0-2 [88.7 kB]
197s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-data all 2.82.2-3 [51.7 kB]
197s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dbus amd64 1.3.2-5build4 [110 kB]
197s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-3build1 [293 kB]
197s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-yaml amd64 6.0.2-1build1 [187 kB]
197s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 vim-tiny amd64 2:9.1.0861-1ubuntu1 [1037 kB]
198s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 vim-common all 2:9.1.0861-1ubuntu1 [395 kB]
198s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 xxd amd64 2:9.1.0861-1ubuntu1 [67.8 kB]
198s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libplymouth5 amd64 24.004.60-2ubuntu3 [145 kB]
198s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 plymouth-theme-ubuntu-text amd64 24.004.60-2ubuntu3 [10.3 kB]
198s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 plymouth amd64 24.004.60-2ubuntu3 [140 kB]
198s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 bpftrace amd64 0.21.2-2ubuntu3 [1787 kB]
198s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 curl amd64 8.9.1-2ubuntu3 [243 kB]
198s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4t64 amd64 8.9.1-2ubuntu3 [420 kB]
198s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 dracut-install amd64 105-2ubuntu2 [35.9 kB]
198s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 fwupd-signed amd64 1.55+1.7-1 [30.6 kB]
198s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl3t64-gnutls amd64 8.9.1-2ubuntu3 [412 kB]
198s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libsgutils2-1.48 amd64 1.48-0ubuntu1 [124 kB]
198s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-base all 4.10.1ubuntu1 [34.8 kB]
198s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 lxd-installer all 10 [5264 B]
198s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 pinentry-curses amd64 1.3.1-0ubuntu2 [41.6 kB]
198s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-blinker all 1.9.0-1 [10.7 kB]
198s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-rpds-py amd64 0.21.0-2ubuntu1 [323 kB]
198s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jsonschema-specifications all 2023.12.1-2 [9116 B]
198s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 sg3-utils amd64 1.48-0ubuntu1 [1042 kB]
198s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 sg3-utils-udev all 1.48-0ubuntu1 [6608 B]
198s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 amd64-microcode amd64 3.20240820.1ubuntu1 [187 kB]
198s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 intel-microcode amd64 3.20241112.1ubuntu2 [7055 kB]
198s Preconfiguring packages ...
198s Fetched 19.9 MB in 1s (15.1 MB/s)
199s (Reading database ... 
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199s Preparing to unpack .../bash_5.2.32-1ubuntu2_amd64.deb ...
199s Unpacking bash (5.2.32-1ubuntu2) over (5.2.32-1ubuntu1) ...
199s Setting up bash (5.2.32-1ubuntu2) ...
199s update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode
199s (Reading database ... 
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199s Preparing to unpack .../hostname_3.25_amd64.deb ...
199s Unpacking hostname (3.25) over (3.23+nmu2ubuntu2) ...
199s Setting up hostname (3.25) ...
199s (Reading database ... 
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199s Preparing to unpack .../libaudit-common_1%3a4.0.2-2ubuntu1_all.deb ...
199s Unpacking libaudit-common (1:4.0.2-2ubuntu1) over (1:4.0.1-1ubuntu2) ...
199s Setting up libaudit-common (1:4.0.2-2ubuntu1) ...
199s (Reading database ... 
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199s Preparing to unpack .../libaudit1_1%3a4.0.2-2ubuntu1_amd64.deb ...
199s Unpacking libaudit1:amd64 (1:4.0.2-2ubuntu1) over (1:4.0.1-1ubuntu2) ...
199s Setting up libaudit1:amd64 (1:4.0.2-2ubuntu1) ...
199s (Reading database ... 
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199s Preparing to unpack .../debconf-i18n_1.5.87ubuntu1_all.deb ...
199s Unpacking debconf-i18n (1.5.87ubuntu1) over (1.5.86ubuntu1) ...
199s Preparing to unpack .../python3-debconf_1.5.87ubuntu1_all.deb ...
199s Unpacking python3-debconf (1.5.87ubuntu1) over (1.5.86ubuntu1) ...
199s Preparing to unpack .../debconf_1.5.87ubuntu1_all.deb ...
199s Unpacking debconf (1.5.87ubuntu1) over (1.5.86ubuntu1) ...
199s Setting up debconf (1.5.87ubuntu1) ...
199s (Reading database ... 
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199s Preparing to unpack .../libpam0g_1.5.3-7ubuntu4_amd64.deb ...
199s Unpacking libpam0g:amd64 (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ...
199s Setting up libpam0g:amd64 (1.5.3-7ubuntu4) ...
199s (Reading database ... 
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199s Preparing to unpack .../libselinux1_3.7-3ubuntu1_amd64.deb ...
199s Unpacking libselinux1:amd64 (3.7-3ubuntu1) over (3.5-2ubuntu5) ...
200s Setting up libselinux1:amd64 (3.7-3ubuntu1) ...
200s (Reading database ... 
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200s Preparing to unpack .../libpam-modules-bin_1.5.3-7ubuntu4_amd64.deb ...
200s Unpacking libpam-modules-bin (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ...
200s Setting up libpam-modules-bin (1.5.3-7ubuntu4) ...
200s pam_namespace.service is a disabled or a static unit not running, not starting it.
200s (Reading database ... 
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200s Preparing to unpack .../libpam-modules_1.5.3-7ubuntu4_amd64.deb ...
200s Unpacking libpam-modules:amd64 (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ...
200s Setting up libpam-modules:amd64 (1.5.3-7ubuntu4) ...
200s (Reading database ... 
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200s Preparing to unpack .../openssh-sftp-server_1%3a9.9p1-3ubuntu2_amd64.deb ...
200s Unpacking openssh-sftp-server (1:9.9p1-3ubuntu2) over (1:9.7p1-7ubuntu5) ...
200s Preparing to unpack .../openssh-server_1%3a9.9p1-3ubuntu2_amd64.deb ...
200s Unpacking openssh-server (1:9.9p1-3ubuntu2) over (1:9.7p1-7ubuntu5) ...
200s Preparing to unpack .../openssh-client_1%3a9.9p1-3ubuntu2_amd64.deb ...
200s Unpacking openssh-client (1:9.9p1-3ubuntu2) over (1:9.7p1-7ubuntu5) ...
200s Preparing to unpack .../libpam-runtime_1.5.3-7ubuntu4_all.deb ...
200s Unpacking libpam-runtime (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ...
200s Setting up libpam-runtime (1.5.3-7ubuntu4) ...
201s (Reading database ... 
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201s Preparing to unpack .../libsemanage-common_3.7-2build1_all.deb ...
201s Unpacking libsemanage-common (3.7-2build1) over (3.5-1build6) ...
201s Setting up libsemanage-common (3.7-2build1) ...
201s (Reading database ... 
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201s Preparing to unpack .../libsemanage2_3.7-2build1_amd64.deb ...
201s Unpacking libsemanage2:amd64 (3.7-2build1) over (3.5-1build6) ...
201s Setting up libsemanage2:amd64 (3.7-2build1) ...
201s (Reading database ... 
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201s Preparing to unpack .../00-distro-info_1.12_amd64.deb ...
201s Unpacking distro-info (1.12) over (1.9) ...
201s Preparing to unpack .../01-gir1.2-girepository-2.0_1.82.0-2_amd64.deb ...
201s Unpacking gir1.2-girepository-2.0:amd64 (1.82.0-2) over (1.80.1-4) ...
201s Preparing to unpack .../02-gir1.2-glib-2.0_2.82.2-3_amd64.deb ...
201s Unpacking gir1.2-glib-2.0:amd64 (2.82.2-3) over (2.82.1-0ubuntu1) ...
201s Preparing to unpack .../03-libglib2.0-0t64_2.82.2-3_amd64.deb ...
201s Unpacking libglib2.0-0t64:amd64 (2.82.2-3) over (2.82.1-0ubuntu1) ...
201s Preparing to unpack .../04-libgirepository-1.0-1_1.82.0-2_amd64.deb ...
201s Unpacking libgirepository-1.0-1:amd64 (1.82.0-2) over (1.80.1-4) ...
201s Preparing to unpack .../05-libglib2.0-data_2.82.2-3_all.deb ...
201s Unpacking libglib2.0-data (2.82.2-3) over (2.82.1-0ubuntu1) ...
201s Preparing to unpack .../06-python3-dbus_1.3.2-5build4_amd64.deb ...
201s Unpacking python3-dbus (1.3.2-5build4) over (1.3.2-5build3) ...
201s Preparing to unpack .../07-python3-gi_3.50.0-3build1_amd64.deb ...
201s Unpacking python3-gi (3.50.0-3build1) over (3.50.0-3) ...
201s Preparing to unpack .../08-python3-yaml_6.0.2-1build1_amd64.deb ...
201s Unpacking python3-yaml (6.0.2-1build1) over (6.0.2-1) ...
201s Preparing to unpack .../09-vim-tiny_2%3a9.1.0861-1ubuntu1_amd64.deb ...
201s Unpacking vim-tiny (2:9.1.0861-1ubuntu1) over (2:9.1.0777-1ubuntu1) ...
201s Preparing to unpack .../10-vim-common_2%3a9.1.0861-1ubuntu1_all.deb ...
201s Unpacking vim-common (2:9.1.0861-1ubuntu1) over (2:9.1.0777-1ubuntu1) ...
201s Preparing to unpack .../11-xxd_2%3a9.1.0861-1ubuntu1_amd64.deb ...
201s Unpacking xxd (2:9.1.0861-1ubuntu1) over (2:9.1.0777-1ubuntu1) ...
201s Preparing to unpack .../12-libplymouth5_24.004.60-2ubuntu3_amd64.deb ...
201s Unpacking libplymouth5:amd64 (24.004.60-2ubuntu3) over (24.004.60-1ubuntu11) ...
201s Preparing to unpack .../13-plymouth-theme-ubuntu-text_24.004.60-2ubuntu3_amd64.deb ...
201s Unpacking plymouth-theme-ubuntu-text (24.004.60-2ubuntu3) over (24.004.60-1ubuntu11) ...
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202s Preparing to unpack .../20-libcurl3t64-gnutls_8.9.1-2ubuntu3_amd64.deb ...
202s Unpacking libcurl3t64-gnutls:amd64 (8.9.1-2ubuntu3) over (8.9.1-2ubuntu2) ...
202s Selecting previously unselected package libsgutils2-1.48:amd64.
202s Preparing to unpack .../21-libsgutils2-1.48_1.48-0ubuntu1_amd64.deb ...
202s Unpacking libsgutils2-1.48:amd64 (1.48-0ubuntu1) ...
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202s Unpacking python3-rpds-py (0.21.0-2ubuntu1) over (0.20.0-0ubuntu3) ...
202s Preparing to unpack .../27-python3-jsonschema-specifications_2023.12.1-2_all.deb ...
202s Unpacking python3-jsonschema-specifications (2023.12.1-2) over (2023.12.1-1ubuntu1) ...
202s Preparing to unpack .../28-sg3-utils_1.48-0ubuntu1_amd64.deb ...
202s Unpacking sg3-utils (1.48-0ubuntu1) over (1.46-3ubuntu5) ...
202s Preparing to unpack .../29-sg3-utils-udev_1.48-0ubuntu1_all.deb ...
202s Unpacking sg3-utils-udev (1.48-0ubuntu1) over (1.46-3ubuntu5) ...
202s Preparing to unpack .../30-amd64-microcode_3.20240820.1ubuntu1_amd64.deb ...
202s Unpacking amd64-microcode (3.20240820.1ubuntu1) over (3.20240116.2+nmu1ubuntu1.1) ...
202s Preparing to unpack .../31-intel-microcode_3.20241112.1ubuntu2_amd64.deb ...
202s Unpacking intel-microcode (3.20241112.1ubuntu2) over (3.20240910.0ubuntu1) ...
202s Setting up pinentry-curses (1.3.1-0ubuntu2) ...
202s Setting up distro-info (1.12) ...
202s Setting up linux-base (4.10.1ubuntu1) ...
202s Setting up libcurl4t64:amd64 (8.9.1-2ubuntu3) ...
202s Setting up bpftrace (0.21.2-2ubuntu3) ...
202s Setting up openssh-client (1:9.9p1-3ubuntu2) ...
202s Setting up intel-microcode (3.20241112.1ubuntu2) ...
202s intel-microcode: microcode will be updated at next boot
202s Setting up python3-debconf (1.5.87ubuntu1) ...
202s Setting up libcurl3t64-gnutls:amd64 (8.9.1-2ubuntu3) ...
202s Setting up fwupd-signed (1.55+1.7-1) ...
202s Setting up libsgutils2-1.48:amd64 (1.48-0ubuntu1) ...
202s Setting up python3-yaml (6.0.2-1build1) ...
203s Setting up debconf-i18n (1.5.87ubuntu1) ...
203s Setting up amd64-microcode (3.20240820.1ubuntu1) ...
203s amd64-microcode: microcode will be updated at next boot
203s Setting up xxd (2:9.1.0861-1ubuntu1) ...
203s Setting up libglib2.0-0t64:amd64 (2.82.2-3) ...
203s No schema files found: doing nothing.
203s Setting up libglib2.0-data (2.82.2-3) ...
203s Setting up vim-common (2:9.1.0861-1ubuntu1) ...
203s Setting up gir1.2-glib-2.0:amd64 (2.82.2-3) ...
203s Setting up lxd-installer (10) ...
203s Setting up python3-rpds-py (0.21.0-2ubuntu1) ...
203s Setting up dracut-install (105-2ubuntu2) ...
203s Setting up libplymouth5:amd64 (24.004.60-2ubuntu3) ...
203s Setting up libgirepository-1.0-1:amd64 (1.82.0-2) ...
203s Setting up curl (8.9.1-2ubuntu3) ...
203s Setting up python3-jsonschema-specifications (2023.12.1-2) ...
203s Setting up sg3-utils (1.48-0ubuntu1) ...
203s Setting up python3-blinker (1.9.0-1) ...
203s Setting up openssh-sftp-server (1:9.9p1-3ubuntu2) ...
203s Setting up python3-dbus (1.3.2-5build4) ...
203s Setting up openssh-server (1:9.9p1-3ubuntu2) ...
203s Installing new version of config file /etc/ssh/moduli ...
203s Replacing config file /etc/ssh/sshd_config with new version
204s Setting up plymouth (24.004.60-2ubuntu3) ...
204s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic
204s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
212s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
213s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
213s Setting up vim-tiny (2:9.1.0861-1ubuntu1) ...
213s Setting up sg3-utils-udev (1.48-0ubuntu1) ...
213s update-initramfs: deferring update (trigger activated)
213s Setting up plymouth-theme-ubuntu-text (24.004.60-2ubuntu3) ...
213s update-initramfs: deferring update (trigger activated)
213s Setting up gir1.2-girepository-2.0:amd64 (1.82.0-2) ...
213s Setting up python3-gi (3.50.0-3build1) ...
213s Processing triggers for install-info (7.1.1-1) ...
213s Processing triggers for initramfs-tools (0.142ubuntu35) ...
213s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic
213s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
220s Processing triggers for libc-bin (2.40-1ubuntu3) ...
220s Processing triggers for ufw (0.36.2-8) ...
220s Processing triggers for man-db (2.13.0-1) ...
222s Processing triggers for debianutils (5.21) ...
222s Reading package lists...
222s Building dependency tree...
222s Reading state information...
222s The following packages will be REMOVED:
222s   libsgutils2-1.46-2*
223s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded.
223s After this operation, 294 kB disk space will be freed.
223s (Reading database ... 
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223s Removing libsgutils2-1.46-2:amd64 (1.46-3ubuntu5) ...
223s Processing triggers for libc-bin (2.40-1ubuntu3) ...
223s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease
223s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
223s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
223s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
224s Reading package lists...
224s Reading package lists...
225s Building dependency tree...
225s Reading state information...
225s Calculating upgrade...
225s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
225s Reading package lists...
225s Building dependency tree...
225s Reading state information...
225s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
225s autopkgtest [20:53:09]: rebooting testbed after setup commands that affected boot
246s Reading package lists...
246s Building dependency tree...
246s Reading state information...
246s Starting pkgProblemResolver with broken count: 0
246s Starting 2 pkgProblemResolver with broken count: 0
246s Done
247s The following additional packages will be installed:
247s   build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu
247s   dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
247s   fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-14
247s   g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14
247s   gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gdal-data gdal-plugins gfortran
247s   gfortran-14 gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu
247s   icu-devtools javascript-common libaec0 libaom3 libarmadillo14 libarpack2t64
247s   libasan8 libblas-dev libblas3 libblosc1 libbz2-dev libcairo2 libcc1-0
247s   libcfitsio10t64 libdatrie1 libde265-0 libdeflate-dev libdeflate0
247s   libfontconfig1 libfreexl1 libfyba0t64 libgcc-14-dev libgdal35 libgeos-c1t64
247s   libgeos3.13.0 libgeotiff5 libgfortran-14-dev libgfortran5 libgif7 libgomp1
247s   libgpgmepp6t64 libgraphite2-3 libharfbuzz0b libhdf4-0-alt libhdf5-103-1t64
247s   libhdf5-hl-100t64 libheif-plugin-aomdec libheif-plugin-libde265 libheif1
247s   libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev
247s   libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap
247s   libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery
247s   libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json
247s   libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js
247s   libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker
247s   libkmlbase1t64 libkmldom1t64 libkmlengine1t64 liblapack-dev liblapack3
247s   liblcms2-2 liblerc4 liblsan0 libltdl7 liblua5.4-0 liblzma-dev libminizip1t64
247s   libmpc3 libmysqlclient21 libncurses-dev libnetcdf19t64 libodbc2 libodbcinst2
247s   libogdi4.1 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
247s   libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev
247s   libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpoppler140 libpq5
247s   libproj25 libqhull-r8.0 libquadmath0 libreadline-dev librttopo1 libsharpyuv0
247s   libsm6 libsnappy1v5 libspatialite8t64 libstdc++-14-dev libsz2 libtcl8.6
247s   libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1
247s   libudunits2-0 libudunits2-data liburiparser1 libwebp7 libxcb-render0
247s   libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1 libxt6t64 littler
247s   mysql-common node-bootstrap-sass node-html5shiv node-normalize.css pandoc
247s   pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin proj-data r-base-core
247s   r-base-dev r-cran-base64enc r-cran-bdsmatrix r-cran-bslib r-cran-cachem
247s   r-cran-class r-cran-classint r-cran-cli r-cran-collapse r-cran-commonmark
247s   r-cran-crayon r-cran-dbi r-cran-digest r-cran-e1071 r-cran-evaluate
247s   r-cran-fastmap r-cran-fontawesome r-cran-foreign r-cran-formula r-cran-fs
247s   r-cran-generics r-cran-glue r-cran-highr r-cran-htmltools r-cran-httpuv
247s   r-cran-intervals r-cran-isocodes r-cran-jquerylib r-cran-jsonlite
247s   r-cran-kernsmooth r-cran-knitr r-cran-later r-cran-lattice r-cran-lifecycle
247s   r-cran-littler r-cran-lmtest r-cran-magrittr r-cran-mapdata r-cran-maps
247s   r-cran-markdown r-cran-mass r-cran-maxlik r-cran-memoise r-cran-mime
247s   r-cran-misctools r-cran-nlme r-cran-pkgkitten r-cran-plm r-cran-promises
247s   r-cran-proxy r-cran-r6 r-cran-rappdirs r-cran-raster r-cran-rbibutils
247s   r-cran-rcolorbrewer r-cran-rcpp r-cran-rdpack r-cran-rlang r-cran-rmarkdown
247s   r-cran-rpostgresql r-cran-s2 r-cran-sandwich r-cran-sass r-cran-sf
247s   r-cran-shiny r-cran-sourcetools r-cran-sp r-cran-spacetime r-cran-terra
247s   r-cran-tinytex r-cran-units r-cran-withr r-cran-wk r-cran-xfun r-cran-xtable
247s   r-cran-xts r-cran-yaml r-cran-zoo unixodbc-common unzip x11-common xdg-utils
247s   zip zlib1g-dev
247s Suggested packages:
247s   cpp-doc gcc-14-locales cpp-14-doc debtags g++-multilib g++-14-multilib
247s   gcc-14-doc gcc-multilib manpages-dev autoconf automake libtool flex bison
247s   gdb gcc-doc gcc-14-multilib gdb-x86-64-linux-gnu gfortran-multilib
247s   gfortran-doc gfortran-14-multilib gfortran-14-doc libcoarrays-dev apache2
247s   | lighttpd | httpd liblapack-doc geotiff-bin gdal-bin libgeotiff-epsg
247s   libhdf4-alt-dev hdf4-tools libheif-plugin-x265 libheif-plugin-ffmpegdec
247s   libheif-plugin-jpegdec libheif-plugin-jpegenc libheif-plugin-j2kdec
247s   libheif-plugin-j2kenc libheif-plugin-kvazaar libheif-plugin-rav1e
247s   libheif-plugin-svtenc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras
247s   fonts-stix libjs-mathjax-doc liblcms2-utils liblzma-doc ncurses-doc
247s   odbc-postgresql tdsodbc ogdi-bin proj-bin readline-doc libstdc++-14-doc
247s   tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex
247s   pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff
247s   ghc php python ruby libjs-katex citation-style-language-styles elpa-ess
247s   r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
247s   texlive-plain-generic texlive-fonts-recommended texlive-fonts-extra
247s   texlive-extra-utils texinfo r-cran-rstudioapi r-cran-rmysql r-cran-covr
247s   r-cran-tibble r-cran-testthat r-cran-getopt r-cran-mapproj r-cran-httr
247s   r-cran-roxygen2 r-cran-inline r-cran-survival
247s Recommended packages:
247s   bzip2-doc proj-bin libheif-plugin-aomenc node-jquery libpng-tools
247s   poppler-data r-recommended r-doc-html r-cran-curl r-cran-future
247s   r-cran-ggplot2 r-cran-testthat r-cran-thematic r-cran-spdata r-cran-tinytest
247s   r-cran-callr r-cran-covr r-cran-htmlwidgets r-cran-mockery r-cran-processx
247s   r-cran-ps r-cran-rprojroot r-cran-rstudioapi r-cran-tibble r-cran-whoami
247s   r-cran-data.table r-cran-rcpparmadillo r-cran-rcppeigen r-cran-dplyr
247s   r-cran-scales r-cran-microbenchmark r-cran-xml2 r-cran-rsvg r-cran-pillar
247s   r-cran-spelling r-cran-vctrs r-cran-pkgload r-cran-rsqlite r-cran-waldo
247s   r-cran-testit r-cran-cairo r-cran-ragg r-cran-httr r-cran-r.rsp
247s   r-cran-codetools r-cran-formatr r-cran-gridsvg r-cran-jpeg r-cran-magick
247s   r-cran-png r-cran-reticulate r-cran-rgl r-cran-tikzdevice r-cran-webshot
247s   r-cran-svglite node-highlight.js r-cran-lintr r-cran-tidyverse r-cran-rcurl
247s   r-cran-clue r-cran-plot3d r-cran-runit r-cran-aer r-cran-car r-cran-spdep
247s   r-cran-statmod r-cran-urca r-cran-bookdown r-cran-purrr r-cran-cba
247s   r-cran-ncdf4 r-cran-igraph r-cran-gstat r-cran-fields r-cran-exactextractr
247s   r-cran-gbrd r-cran-usethis r-cran-dygraphs r-cran-rsconnect r-cran-downlit
247s   r-cran-bit64 r-cran-blob r-cran-nanoarrow r-cran-lwgeom r-cran-matrix
247s   r-cran-pbapply r-cran-spatstat r-cran-spatstat.geom r-cran-spatstat.random
247s   r-cran-spatstat.linnet r-cran-spatstat.utils r-cran-stars r-cran-tidyr
247s   r-cran-tidyselect r-cran-dt r-cran-deldir r-cran-sftime r-cran-xml
247s   r-cran-vdiffr r-cran-readr r-cran-remotes r-cran-renv r-cran-timeseries
247s   r-cran-timedate r-cran-tseries r-cran-chron libfile-mimeinfo-perl
247s   libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils
247s The following NEW packages will be installed:
247s   autopkgtest-satdep build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu
247s   cpp-x86-64-linux-gnu dctrl-tools fontconfig fontconfig-config
247s   fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome
247s   fonts-glyphicons-halflings fonts-mathjax g++ g++-14 g++-14-x86-64-linux-gnu
247s   g++-x86-64-linux-gnu gcc gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu
247s   gdal-data gdal-plugins gfortran gfortran-14 gfortran-14-x86-64-linux-gnu
247s   gfortran-x86-64-linux-gnu icu-devtools javascript-common libaec0 libaom3
247s   libarmadillo14 libarpack2t64 libasan8 libblas-dev libblas3 libblosc1
247s   libbz2-dev libcairo2 libcc1-0 libcfitsio10t64 libdatrie1 libde265-0
247s   libdeflate-dev libdeflate0 libfontconfig1 libfreexl1 libfyba0t64
247s   libgcc-14-dev libgdal35 libgeos-c1t64 libgeos3.13.0 libgeotiff5
247s   libgfortran-14-dev libgfortran5 libgif7 libgomp1 libgpgmepp6t64
247s   libgraphite2-3 libharfbuzz0b libhdf4-0-alt libhdf5-103-1t64
247s   libhdf5-hl-100t64 libheif-plugin-aomdec libheif-plugin-libde265 libheif1
247s   libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev
247s   libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap
247s   libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery
247s   libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json
247s   libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js
247s   libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker
247s   libkmlbase1t64 libkmldom1t64 libkmlengine1t64 liblapack-dev liblapack3
247s   liblcms2-2 liblerc4 liblsan0 libltdl7 liblua5.4-0 liblzma-dev libminizip1t64
247s   libmpc3 libmysqlclient21 libncurses-dev libnetcdf19t64 libodbc2 libodbcinst2
247s   libogdi4.1 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
247s   libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev
247s   libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpoppler140 libpq5
247s   libproj25 libqhull-r8.0 libquadmath0 libreadline-dev librttopo1 libsharpyuv0
247s   libsm6 libsnappy1v5 libspatialite8t64 libstdc++-14-dev libsz2 libtcl8.6
247s   libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1
247s   libudunits2-0 libudunits2-data liburiparser1 libwebp7 libxcb-render0
247s   libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1 libxt6t64 littler
247s   mysql-common node-bootstrap-sass node-html5shiv node-normalize.css pandoc
247s   pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin proj-data r-base-core
247s   r-base-dev r-cran-base64enc r-cran-bdsmatrix r-cran-bslib r-cran-cachem
247s   r-cran-class r-cran-classint r-cran-cli r-cran-collapse r-cran-commonmark
247s   r-cran-crayon r-cran-dbi r-cran-digest r-cran-e1071 r-cran-evaluate
247s   r-cran-fastmap r-cran-fontawesome r-cran-foreign r-cran-formula r-cran-fs
247s   r-cran-generics r-cran-glue r-cran-highr r-cran-htmltools r-cran-httpuv
247s   r-cran-intervals r-cran-isocodes r-cran-jquerylib r-cran-jsonlite
247s   r-cran-kernsmooth r-cran-knitr r-cran-later r-cran-lattice r-cran-lifecycle
247s   r-cran-littler r-cran-lmtest r-cran-magrittr r-cran-mapdata r-cran-maps
247s   r-cran-markdown r-cran-mass r-cran-maxlik r-cran-memoise r-cran-mime
247s   r-cran-misctools r-cran-nlme r-cran-pkgkitten r-cran-plm r-cran-promises
247s   r-cran-proxy r-cran-r6 r-cran-rappdirs r-cran-raster r-cran-rbibutils
247s   r-cran-rcolorbrewer r-cran-rcpp r-cran-rdpack r-cran-rlang r-cran-rmarkdown
247s   r-cran-rpostgresql r-cran-s2 r-cran-sandwich r-cran-sass r-cran-sf
247s   r-cran-shiny r-cran-sourcetools r-cran-sp r-cran-spacetime r-cran-terra
247s   r-cran-tinytex r-cran-units r-cran-withr r-cran-wk r-cran-xfun r-cran-xtable
247s   r-cran-xts r-cran-yaml r-cran-zoo unixodbc-common unzip x11-common xdg-utils
247s   zip zlib1g-dev
247s 0 upgraded, 255 newly installed, 0 to remove and 0 not upgraded.
247s Need to get 302 MB/302 MB of archives.
247s After this operation, 978 MB of additional disk space will be used.
247s Get:1 /tmp/autopkgtest.2ZIMwP/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [788 B]
247s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB]
248s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB]
248s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-8ubuntu1 [11.9 MB]
248s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-8ubuntu1 [1030 B]
248s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [5452 B]
248s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.1.0-2ubuntu1 [22.4 kB]
248s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 14.2.0-8ubuntu1 [47.6 kB]
248s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-8ubuntu1 [148 kB]
248s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 14.2.0-8ubuntu1 [29.1 kB]
248s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 14.2.0-8ubuntu1 [2998 kB]
248s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 14.2.0-8ubuntu1 [1317 kB]
248s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 14.2.0-8ubuntu1 [2732 kB]
248s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 14.2.0-8ubuntu1 [1177 kB]
249s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 14.2.0-8ubuntu1 [1634 kB]
249s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 14.2.0-8ubuntu1 [153 kB]
249s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-8ubuntu1 [2814 kB]
249s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-8ubuntu1 [23.3 MB]
250s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-8ubuntu1 [528 kB]
250s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1214 B]
250s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.1.0-2ubuntu1 [5000 B]
250s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-8ubuntu1 [2504 kB]
250s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-8ubuntu1 [13.3 MB]
251s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-8ubuntu1 [19.9 kB]
251s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [966 B]
251s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.1.0-2ubuntu1 [1100 B]
251s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B]
251s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 dctrl-tools amd64 2.24-3build3 [106 kB]
251s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB]
251s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB]
251s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB]
251s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB]
251s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB]
251s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB]
251s Get:35 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB]
251s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB]
251s Get:37 http://ftpmaster.internal/ubuntu plucky/universe amd64 gdal-data all 3.9.3+dfsg-1build1 [269 kB]
251s Get:38 http://ftpmaster.internal/ubuntu plucky/universe amd64 gdal-plugins amd64 3.9.3+dfsg-1build1 [25.3 kB]
251s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-8ubuntu1 [909 kB]
251s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran-14-dev amd64 14.2.0-8ubuntu1 [965 kB]
251s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-8ubuntu1 [12.5 MB]
252s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14 amd64 14.2.0-8ubuntu1 [11.9 kB]
252s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1022 B]
252s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran amd64 4:14.1.0-2ubuntu1 [1172 B]
252s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 icu-devtools amd64 74.2-1ubuntu4 [213 kB]
252s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 11+nmu1 [5936 B]
252s Get:47 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB]
252s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libaom3 amd64 3.11.0-1 [2761 kB]
252s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-3build2 [247 kB]
252s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-3build2 [2668 kB]
252s Get:51 http://ftpmaster.internal/ubuntu plucky/universe amd64 libarpack2t64 amd64 3.9.1-1.1ubuntu1 [107 kB]
252s Get:52 http://ftpmaster.internal/ubuntu plucky/universe amd64 libarmadillo14 amd64 1:14.0.1+dfsg-2build1 [104 kB]
252s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas-dev amd64 3.12.0-3build2 [172 kB]
252s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libsnappy1v5 amd64 1.2.1-1 [30.4 kB]
252s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 libblosc1 amd64 1.21.5+ds-1build1 [36.2 kB]
252s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libbz2-dev amd64 1.0.8-6 [33.8 kB]
252s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB]
252s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB]
252s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B]
252s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB]
252s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB]
252s Get:62 http://ftpmaster.internal/ubuntu plucky/universe amd64 libcfitsio10t64 amd64 4.4.1-2 [524 kB]
252s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB]
252s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libde265-0 amd64 1.0.15-1build4 [168 kB]
252s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.22-1 [64.5 kB]
252s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate-dev amd64 1.22-1 [72.2 kB]
252s Get:67 http://ftpmaster.internal/ubuntu plucky/universe amd64 libfyba0t64 amd64 4.1.1-11build1 [119 kB]
252s Get:68 http://ftpmaster.internal/ubuntu plucky/universe amd64 libminizip1t64 amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [22.9 kB]
252s Get:69 http://ftpmaster.internal/ubuntu plucky/universe amd64 libfreexl1 amd64 2.0.0-1build2 [41.7 kB]
252s Get:70 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeos3.13.0 amd64 3.13.0-1 [1017 kB]
253s Get:71 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeos-c1t64 amd64 3.13.0-1 [103 kB]
253s Get:72 http://ftpmaster.internal/ubuntu plucky/universe amd64 proj-data all 9.5.0-1 [7919 kB]
253s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB]
253s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB]
253s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B]
253s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB]
253s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [17.5 kB]
253s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.4.0-0.1 [231 kB]
253s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB]
253s Get:80 http://ftpmaster.internal/ubuntu plucky/universe amd64 libproj25 amd64 9.5.0-1 [1500 kB]
253s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeotiff5 amd64 1.7.3-1 [63.0 kB]
253s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 libgif7 amd64 5.2.2-1ubuntu1 [35.2 kB]
253s Get:83 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B]
253s Get:84 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf4-0-alt amd64 4.3.0-1 [285 kB]
253s Get:85 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-103-1t64 amd64 1.10.10+repack-4ubuntu3 [1280 kB]
253s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif-plugin-aomdec amd64 1.19.3-1 [11.5 kB]
253s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif-plugin-libde265 amd64 1.19.3-1 [8968 B]
253s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif1 amd64 1.19.3-1 [415 kB]
253s Get:89 http://ftpmaster.internal/ubuntu plucky/universe amd64 liburiparser1 amd64 0.9.8+dfsg-2 [46.8 kB]
253s Get:90 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmlbase1t64 amd64 1.3.0-12build1 [49.9 kB]
253s Get:91 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmldom1t64 amd64 1.3.0-12build1 [156 kB]
253s Get:92 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmlengine1t64 amd64 1.3.0-12build1 [71.4 kB]
253s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 mysql-common all 5.8+1.1.1 [6800 B]
253s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 libmysqlclient21 amd64 8.0.40-1 [1250 kB]
253s Get:95 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-4ubuntu3 [56.6 kB]
253s Get:96 http://ftpmaster.internal/ubuntu plucky/universe amd64 libnetcdf19t64 amd64 1:4.9.2-6ubuntu1 [472 kB]
253s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl7 amd64 2.4.7-8 [43.9 kB]
253s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 libodbc2 amd64 2.3.12-1ubuntu1 [158 kB]
253s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 unixodbc-common all 2.3.12-1ubuntu1 [8796 B]
253s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libodbcinst2 amd64 2.3.12-1ubuntu1 [30.7 kB]
253s Get:101 http://ftpmaster.internal/ubuntu plucky/universe amd64 libogdi4.1 amd64 4.1.1+ds-5 [219 kB]
253s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libopenjp2-7 amd64 2.5.0-2ubuntu1 [184 kB]
253s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 libgpgmepp6t64 amd64 1.24.0-2ubuntu1 [126 kB]
254s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 liblcms2-2 amd64 2.16-2 [212 kB]
254s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 libpoppler140 amd64 24.08.0-3 [1262 kB]
254s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libpq5 amd64 17.0-1 [249 kB]
254s Get:107 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqhull-r8.0 amd64 2020.2-6build1 [193 kB]
254s Get:108 http://ftpmaster.internal/ubuntu plucky/universe amd64 librttopo1 amd64 1.1.0-3build2 [191 kB]
254s Get:109 http://ftpmaster.internal/ubuntu plucky/universe amd64 libspatialite8t64 amd64 5.1.0-3build1 [1919 kB]
254s Get:110 http://ftpmaster.internal/ubuntu plucky/universe amd64 libxerces-c3.2t64 amd64 3.2.4+debian-1.3 [917 kB]
254s Get:111 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgdal35 amd64 3.9.3+dfsg-1build1 [10.0 MB]
255s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB]
255s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.0.1-1 [540 kB]
255s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB]
255s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB]
255s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libicu-dev amd64 74.2-1ubuntu4 [11.9 MB]
256s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8-dev amd64 2.1.5-3ubuntu2 [324 kB]
256s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B]
256s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B]
256s Get:120 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB]
256s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB]
256s Get:122 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB]
256s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB]
256s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB]
256s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB]
256s Get:126 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
256s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB]
256s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB]
256s Get:129 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B]
256s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB]
256s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB]
256s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB]
256s Get:133 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB]
256s Get:134 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack-dev amd64 3.12.0-3build2 [5249 kB]
256s Get:135 http://ftpmaster.internal/ubuntu plucky/main amd64 liblua5.4-0 amd64 5.4.6-3build2 [166 kB]
256s Get:136 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses-dev amd64 6.5-2 [384 kB]
256s Get:137 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB]
256s Get:138 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB]
256s Get:139 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.54.0+ds-3 [252 kB]
256s Get:140 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.54.0+ds-3 [51.6 kB]
256s Get:141 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.54.0+ds-3 [29.1 kB]
256s Get:142 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper1 amd64 1.1.29build1 [13.4 kB]
256s Get:143 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 1.1.29build1 [8650 B]
256s Get:144 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.42-4ubuntu3 [214 kB]
256s Get:145 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-32-0 amd64 10.42-4ubuntu3 [201 kB]
256s Get:146 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-posix3 amd64 10.42-4ubuntu3 [6768 B]
256s Get:147 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-dev amd64 10.42-4ubuntu3 [747 kB]
256s Get:148 http://ftpmaster.internal/ubuntu plucky/main amd64 libpkgconf3 amd64 1.8.1-4 [32.3 kB]
256s Get:149 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB]
256s Get:150 http://ftpmaster.internal/ubuntu plucky/main amd64 libpng-dev amd64 1.6.44-2 [300 kB]
257s Get:151 http://ftpmaster.internal/ubuntu plucky/main amd64 libreadline-dev amd64 8.2-5 [169 kB]
257s Get:152 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB]
257s Get:153 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.15+dfsg-2 [1085 kB]
257s Get:154 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB]
257s Get:155 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B]
257s Get:156 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.15-1 [862 kB]
257s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 libudunits2-data all 2.2.28-7build1 [19.4 kB]
257s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 libudunits2-0 amd64 2.2.28-7build1 [54.1 kB]
257s Get:159 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB]
257s Get:160 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu1 [185 kB]
257s Get:161 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB]
257s Get:162 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB]
257s Get:163 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.2-1 [28.9 MB]
258s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-1 [96.0 kB]
258s Get:165 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-1 [2486 B]
258s Get:166 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB]
258s Get:167 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
258s Get:168 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB]
258s Get:169 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc-data all 3.1.11.1-3 [78.7 kB]
258s Get:170 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc amd64 3.1.11.1+ds-2 [27.2 MB]
260s Get:171 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma-dev amd64 5.6.2-2 [176 kB]
260s Get:172 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf-bin amd64 1.8.1-4 [21.6 kB]
260s Get:173 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf amd64 1.8.1-4 [16.8 kB]
260s Get:174 http://ftpmaster.internal/ubuntu plucky/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3 [193 kB]
260s Get:175 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-dev all 4.4.2-1 [4340 B]
260s Get:176 http://ftpmaster.internal/ubuntu plucky/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
260s Get:177 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB]
260s Get:178 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bdsmatrix amd64 1.3-7-1 [299 kB]
260s Get:179 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.4-1 [1708 kB]
260s Get:180 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB]
260s Get:181 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB]
260s Get:182 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB]
260s Get:183 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB]
260s Get:184 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB]
260s Get:185 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.8.9+dfsg-1 [445 kB]
260s Get:186 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.3-1 [1348 kB]
260s Get:187 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.7.0-1 [154 kB]
260s Get:188 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
260s Get:189 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB]
260s Get:190 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB]
260s Get:191 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.4+dfsg-1 [245 kB]
260s Get:192 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB]
260s Get:193 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB]
260s Get:194 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB]
260s Get:195 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.7.0+dfsg-1 [4255 kB]
261s Get:196 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mass amd64 7.3-61-1 [1109 kB]
261s Get:197 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-class amd64 7.3-22-2build1 [88.2 kB]
261s Get:198 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB]
261s Get:199 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-e1071 amd64 1.7-16-1 [565 kB]
261s Get:200 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernsmooth amd64 2.23-24-1 [92.9 kB]
261s Get:201 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-classint amd64 0.4-10+dfsg-1 [106 kB]
261s Get:202 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
261s Get:203 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.13-1-1 [1993 kB]
261s Get:204 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-collapse amd64 2.0.16-1 [3351 kB]
262s Get:205 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.1-1 [131 kB]
262s Get:206 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.2-1 [164 kB]
262s Get:207 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dbi all 1.2.3-1 [853 kB]
262s Get:208 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 1.0.0-1 [111 kB]
262s Get:209 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.2-1 [1300 kB]
262s Get:210 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-foreign amd64 0.8.87-1 [245 kB]
262s Get:211 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-formula all 1.2-5-1 [158 kB]
262s Get:212 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB]
262s Get:213 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xfun amd64 0.49+dfsg-1 [545 kB]
262s Get:214 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB]
262s Get:215 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.3.2+dfsg-1 [123 kB]
262s Get:216 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB]
262s Get:217 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.0+dfsg-1 [287 kB]
262s Get:218 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB]
262s Get:219 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-intervals amd64 0.15.5-1 [602 kB]
262s Get:220 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-isocodes all 2024.02.12-1 [312 kB]
262s Get:221 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB]
262s Get:222 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB]
262s Get:223 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-knitr all 1.48+dfsg-1 [910 kB]
262s Get:224 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB]
262s Get:225 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-zoo amd64 1.8-12-2 [984 kB]
262s Get:226 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lmtest amd64 0.9.40-1 [396 kB]
262s Get:227 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-maps amd64 3.4.2-1 [2359 kB]
263s Get:228 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mapdata amd64 2.3.1-1 [23.5 MB]
263s Get:229 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-markdown all 1.12+dfsg-2 [179 kB]
263s Get:230 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-misctools all 0.6-28-1 [99.9 kB]
263s Get:231 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sandwich all 3.1-1-1 [1483 kB]
264s Get:232 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-maxlik all 1.5-2.1-1 [1083 kB]
264s Get:233 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nlme amd64 3.1.166-1 [2314 kB]
264s Get:234 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rbibutils amd64 2.3-1 [1023 kB]
264s Get:235 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rdpack all 2.6.2-1 [757 kB]
264s Get:236 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plm all 2.6-4-1 [2161 kB]
264s Get:237 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sp amd64 1:2.1-4+dfsg-1 [1472 kB]
264s Get:238 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-terra amd64 1.7-78-1 [3751 kB]
264s Get:239 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-raster amd64 3.6-30-1 [3145 kB]
264s Get:240 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB]
264s Get:241 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tinytex all 0.53-1 [145 kB]
264s Get:242 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-modernizr all 3.13.0-0.1 [101 kB]
264s Get:243 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB]
264s Get:244 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB]
264s Get:245 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
264s Get:246 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB]
264s Get:247 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.9.1+dfsg-1 [3111 kB]
264s Get:248 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rmarkdown all 2.28+dfsg-1 [1501 kB]
264s Get:249 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rpostgresql amd64 0.7-7+dfsg-1 [365 kB]
264s Get:250 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-wk amd64 0.9.4-1 [1791 kB]
264s Get:251 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-s2 amd64 1.1.7-1 [2023 kB]
264s Get:252 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-units amd64 0.8-5+dfsg-1 [275 kB]
264s Get:253 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sf amd64 1.0-16+dfsg-1build1 [3064 kB]
265s Get:254 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xts amd64 0.14.0-1 [760 kB]
265s Get:255 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-spacetime all 1.3-2-1 [2776 kB]
265s Preconfiguring packages ...
265s Fetched 302 MB in 18s (17.1 MB/s)
265s Selecting previously unselected package libisl23:amd64.
266s (Reading database ... 
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(Reading database ... 90%
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(Reading database ... 75651 files and directories currently installed.)
266s Preparing to unpack .../000-libisl23_0.27-1_amd64.deb ...
266s Unpacking libisl23:amd64 (0.27-1) ...
266s Selecting previously unselected package libmpc3:amd64.
266s Preparing to unpack .../001-libmpc3_1.3.1-1build2_amd64.deb ...
266s Unpacking libmpc3:amd64 (1.3.1-1build2) ...
266s Selecting previously unselected package cpp-14-x86-64-linux-gnu.
266s Preparing to unpack .../002-cpp-14-x86-64-linux-gnu_14.2.0-8ubuntu1_amd64.deb ...
266s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ...
266s Selecting previously unselected package cpp-14.
266s Preparing to unpack .../003-cpp-14_14.2.0-8ubuntu1_amd64.deb ...
266s Unpacking cpp-14 (14.2.0-8ubuntu1) ...
266s Selecting previously unselected package cpp-x86-64-linux-gnu.
266s Preparing to unpack .../004-cpp-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ...
266s Unpacking cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ...
266s Selecting previously unselected package cpp.
266s Preparing to unpack .../005-cpp_4%3a14.1.0-2ubuntu1_amd64.deb ...
266s Unpacking cpp (4:14.1.0-2ubuntu1) ...
266s Selecting previously unselected package libcc1-0:amd64.
266s Preparing to unpack .../006-libcc1-0_14.2.0-8ubuntu1_amd64.deb ...
266s Unpacking libcc1-0:amd64 (14.2.0-8ubuntu1) ...
266s Selecting previously unselected package libgomp1:amd64.
266s Preparing to unpack .../007-libgomp1_14.2.0-8ubuntu1_amd64.deb ...
266s Unpacking libgomp1:amd64 (14.2.0-8ubuntu1) ...
266s Selecting previously unselected package libitm1:amd64.
266s Preparing to unpack .../008-libitm1_14.2.0-8ubuntu1_amd64.deb ...
266s Unpacking libitm1:amd64 (14.2.0-8ubuntu1) ...
266s Selecting previously unselected package libasan8:amd64.
266s Preparing to unpack .../009-libasan8_14.2.0-8ubuntu1_amd64.deb ...
266s Unpacking libasan8:amd64 (14.2.0-8ubuntu1) ...
266s Selecting previously unselected package liblsan0:amd64.
266s Preparing to unpack .../010-liblsan0_14.2.0-8ubuntu1_amd64.deb ...
266s Unpacking liblsan0:amd64 (14.2.0-8ubuntu1) ...
266s Selecting previously unselected package libtsan2:amd64.
266s Preparing to unpack .../011-libtsan2_14.2.0-8ubuntu1_amd64.deb ...
266s Unpacking libtsan2:amd64 (14.2.0-8ubuntu1) ...
266s Selecting previously unselected package libubsan1:amd64.
266s Preparing to unpack .../012-libubsan1_14.2.0-8ubuntu1_amd64.deb ...
266s Unpacking libubsan1:amd64 (14.2.0-8ubuntu1) ...
266s Selecting previously unselected package libhwasan0:amd64.
266s Preparing to unpack .../013-libhwasan0_14.2.0-8ubuntu1_amd64.deb ...
266s Unpacking libhwasan0:amd64 (14.2.0-8ubuntu1) ...
266s Selecting previously unselected package libquadmath0:amd64.
266s Preparing to unpack .../014-libquadmath0_14.2.0-8ubuntu1_amd64.deb ...
266s Unpacking libquadmath0:amd64 (14.2.0-8ubuntu1) ...
266s Selecting previously unselected package libgcc-14-dev:amd64.
266s Preparing to unpack .../015-libgcc-14-dev_14.2.0-8ubuntu1_amd64.deb ...
266s Unpacking libgcc-14-dev:amd64 (14.2.0-8ubuntu1) ...
266s Selecting previously unselected package gcc-14-x86-64-linux-gnu.
266s Preparing to unpack .../016-gcc-14-x86-64-linux-gnu_14.2.0-8ubuntu1_amd64.deb ...
266s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ...
267s Selecting previously unselected package gcc-14.
267s Preparing to unpack .../017-gcc-14_14.2.0-8ubuntu1_amd64.deb ...
267s Unpacking gcc-14 (14.2.0-8ubuntu1) ...
267s Selecting previously unselected package gcc-x86-64-linux-gnu.
267s Preparing to unpack .../018-gcc-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ...
267s Unpacking gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ...
267s Selecting previously unselected package gcc.
267s Preparing to unpack .../019-gcc_4%3a14.1.0-2ubuntu1_amd64.deb ...
267s Unpacking gcc (4:14.1.0-2ubuntu1) ...
267s Selecting previously unselected package libstdc++-14-dev:amd64.
267s Preparing to unpack .../020-libstdc++-14-dev_14.2.0-8ubuntu1_amd64.deb ...
267s Unpacking libstdc++-14-dev:amd64 (14.2.0-8ubuntu1) ...
267s Selecting previously unselected package g++-14-x86-64-linux-gnu.
267s Preparing to unpack .../021-g++-14-x86-64-linux-gnu_14.2.0-8ubuntu1_amd64.deb ...
267s Unpacking g++-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ...
267s Selecting previously unselected package g++-14.
267s Preparing to unpack .../022-g++-14_14.2.0-8ubuntu1_amd64.deb ...
267s Unpacking g++-14 (14.2.0-8ubuntu1) ...
267s Selecting previously unselected package g++-x86-64-linux-gnu.
267s Preparing to unpack .../023-g++-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ...
267s Unpacking g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ...
267s Selecting previously unselected package g++.
267s Preparing to unpack .../024-g++_4%3a14.1.0-2ubuntu1_amd64.deb ...
267s Unpacking g++ (4:14.1.0-2ubuntu1) ...
267s Selecting previously unselected package build-essential.
267s Preparing to unpack .../025-build-essential_12.10ubuntu1_amd64.deb ...
267s Unpacking build-essential (12.10ubuntu1) ...
267s Selecting previously unselected package dctrl-tools.
267s Preparing to unpack .../026-dctrl-tools_2.24-3build3_amd64.deb ...
267s Unpacking dctrl-tools (2.24-3build3) ...
267s Selecting previously unselected package fonts-dejavu-mono.
267s Preparing to unpack .../027-fonts-dejavu-mono_2.37-8_all.deb ...
267s Unpacking fonts-dejavu-mono (2.37-8) ...
267s Selecting previously unselected package fonts-dejavu-core.
267s Preparing to unpack .../028-fonts-dejavu-core_2.37-8_all.deb ...
267s Unpacking fonts-dejavu-core (2.37-8) ...
267s Selecting previously unselected package fontconfig-config.
267s Preparing to unpack .../029-fontconfig-config_2.15.0-1.1ubuntu2_amd64.deb ...
267s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ...
268s Selecting previously unselected package libfontconfig1:amd64.
268s Preparing to unpack .../030-libfontconfig1_2.15.0-1.1ubuntu2_amd64.deb ...
268s Unpacking libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ...
268s Selecting previously unselected package fontconfig.
268s Preparing to unpack .../031-fontconfig_2.15.0-1.1ubuntu2_amd64.deb ...
268s Unpacking fontconfig (2.15.0-1.1ubuntu2) ...
268s Selecting previously unselected package fonts-font-awesome.
268s Preparing to unpack .../032-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ...
268s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ...
268s Selecting previously unselected package fonts-glyphicons-halflings.
268s Preparing to unpack .../033-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ...
268s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
268s Selecting previously unselected package fonts-mathjax.
268s Preparing to unpack .../034-fonts-mathjax_2.7.9+dfsg-1_all.deb ...
268s Unpacking fonts-mathjax (2.7.9+dfsg-1) ...
268s Selecting previously unselected package gdal-data.
268s Preparing to unpack .../035-gdal-data_3.9.3+dfsg-1build1_all.deb ...
268s Unpacking gdal-data (3.9.3+dfsg-1build1) ...
268s Selecting previously unselected package gdal-plugins:amd64.
268s Preparing to unpack .../036-gdal-plugins_3.9.3+dfsg-1build1_amd64.deb ...
268s Unpacking gdal-plugins:amd64 (3.9.3+dfsg-1build1) ...
268s Selecting previously unselected package libgfortran5:amd64.
268s Preparing to unpack .../037-libgfortran5_14.2.0-8ubuntu1_amd64.deb ...
268s Unpacking libgfortran5:amd64 (14.2.0-8ubuntu1) ...
268s Selecting previously unselected package libgfortran-14-dev:amd64.
268s Preparing to unpack .../038-libgfortran-14-dev_14.2.0-8ubuntu1_amd64.deb ...
268s Unpacking libgfortran-14-dev:amd64 (14.2.0-8ubuntu1) ...
268s Selecting previously unselected package gfortran-14-x86-64-linux-gnu.
268s Preparing to unpack .../039-gfortran-14-x86-64-linux-gnu_14.2.0-8ubuntu1_amd64.deb ...
268s Unpacking gfortran-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ...
268s Selecting previously unselected package gfortran-14.
268s Preparing to unpack .../040-gfortran-14_14.2.0-8ubuntu1_amd64.deb ...
268s Unpacking gfortran-14 (14.2.0-8ubuntu1) ...
268s Selecting previously unselected package gfortran-x86-64-linux-gnu.
268s Preparing to unpack .../041-gfortran-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ...
268s Unpacking gfortran-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ...
268s Selecting previously unselected package gfortran.
268s Preparing to unpack .../042-gfortran_4%3a14.1.0-2ubuntu1_amd64.deb ...
268s Unpacking gfortran (4:14.1.0-2ubuntu1) ...
268s Selecting previously unselected package icu-devtools.
268s Preparing to unpack .../043-icu-devtools_74.2-1ubuntu4_amd64.deb ...
268s Unpacking icu-devtools (74.2-1ubuntu4) ...
268s Selecting previously unselected package javascript-common.
268s Preparing to unpack .../044-javascript-common_11+nmu1_all.deb ...
268s Unpacking javascript-common (11+nmu1) ...
268s Selecting previously unselected package libaec0:amd64.
268s Preparing to unpack .../045-libaec0_1.1.3-1_amd64.deb ...
268s Unpacking libaec0:amd64 (1.1.3-1) ...
268s Selecting previously unselected package libaom3:amd64.
268s Preparing to unpack .../046-libaom3_3.11.0-1_amd64.deb ...
268s Unpacking libaom3:amd64 (3.11.0-1) ...
268s Selecting previously unselected package libblas3:amd64.
268s Preparing to unpack .../047-libblas3_3.12.0-3build2_amd64.deb ...
268s Unpacking libblas3:amd64 (3.12.0-3build2) ...
268s Selecting previously unselected package liblapack3:amd64.
268s Preparing to unpack .../048-liblapack3_3.12.0-3build2_amd64.deb ...
268s Unpacking liblapack3:amd64 (3.12.0-3build2) ...
268s Selecting previously unselected package libarpack2t64:amd64.
268s Preparing to unpack .../049-libarpack2t64_3.9.1-1.1ubuntu1_amd64.deb ...
268s Unpacking libarpack2t64:amd64 (3.9.1-1.1ubuntu1) ...
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268s Selecting previously unselected package libbz2-dev:amd64.
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269s Selecting previously unselected package libcairo2:amd64.
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269s Selecting previously unselected package libhdf4-0-alt:amd64.
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269s Selecting previously unselected package libheif-plugin-aomdec:amd64.
269s Preparing to unpack .../084-libheif-plugin-aomdec_1.19.3-1_amd64.deb ...
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269s Selecting previously unselected package libheif-plugin-libde265:amd64.
269s Preparing to unpack .../085-libheif-plugin-libde265_1.19.3-1_amd64.deb ...
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269s Selecting previously unselected package libheif1:amd64.
269s Preparing to unpack .../086-libheif1_1.19.3-1_amd64.deb ...
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269s Selecting previously unselected package liburiparser1:amd64.
269s Preparing to unpack .../087-liburiparser1_0.9.8+dfsg-2_amd64.deb ...
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269s Selecting previously unselected package libkmlbase1t64:amd64.
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269s Selecting previously unselected package libkmldom1t64:amd64.
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269s Selecting previously unselected package libkmlengine1t64:amd64.
269s Preparing to unpack .../090-libkmlengine1t64_1.3.0-12build1_amd64.deb ...
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269s Selecting previously unselected package mysql-common.
269s Preparing to unpack .../091-mysql-common_5.8+1.1.1_all.deb ...
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270s Selecting previously unselected package libmysqlclient21:amd64.
270s Preparing to unpack .../092-libmysqlclient21_8.0.40-1_amd64.deb ...
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270s Selecting previously unselected package libhdf5-hl-100t64:amd64.
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270s Selecting previously unselected package libnetcdf19t64:amd64.
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270s Selecting previously unselected package libltdl7:amd64.
270s Preparing to unpack .../095-libltdl7_2.4.7-8_amd64.deb ...
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270s Selecting previously unselected package libodbc2:amd64.
270s Preparing to unpack .../096-libodbc2_2.3.12-1ubuntu1_amd64.deb ...
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270s Selecting previously unselected package unixodbc-common.
270s Preparing to unpack .../097-unixodbc-common_2.3.12-1ubuntu1_all.deb ...
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270s Selecting previously unselected package libodbcinst2:amd64.
270s Preparing to unpack .../098-libodbcinst2_2.3.12-1ubuntu1_amd64.deb ...
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270s Selecting previously unselected package libogdi4.1:amd64.
270s Preparing to unpack .../099-libogdi4.1_4.1.1+ds-5_amd64.deb ...
270s Unpacking libogdi4.1:amd64 (4.1.1+ds-5) ...
270s Selecting previously unselected package libopenjp2-7:amd64.
270s Preparing to unpack .../100-libopenjp2-7_2.5.0-2ubuntu1_amd64.deb ...
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270s Selecting previously unselected package libgpgmepp6t64:amd64.
270s Preparing to unpack .../101-libgpgmepp6t64_1.24.0-2ubuntu1_amd64.deb ...
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270s Selecting previously unselected package liblcms2-2:amd64.
270s Preparing to unpack .../102-liblcms2-2_2.16-2_amd64.deb ...
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270s Selecting previously unselected package libpoppler140:amd64.
270s Preparing to unpack .../103-libpoppler140_24.08.0-3_amd64.deb ...
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270s Selecting previously unselected package libpq5:amd64.
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270s Selecting previously unselected package libqhull-r8.0:amd64.
270s Preparing to unpack .../105-libqhull-r8.0_2020.2-6build1_amd64.deb ...
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270s Selecting previously unselected package librttopo1:amd64.
270s Preparing to unpack .../106-librttopo1_1.1.0-3build2_amd64.deb ...
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270s Selecting previously unselected package libspatialite8t64:amd64.
270s Preparing to unpack .../107-libspatialite8t64_5.1.0-3build1_amd64.deb ...
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270s Selecting previously unselected package libxerces-c3.2t64:amd64.
270s Preparing to unpack .../108-libxerces-c3.2t64_3.2.4+debian-1.3_amd64.deb ...
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270s Selecting previously unselected package libgdal35:amd64.
270s Preparing to unpack .../109-libgdal35_3.9.3+dfsg-1build1_amd64.deb ...
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270s Selecting previously unselected package libgraphite2-3:amd64.
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270s Selecting previously unselected package libharfbuzz0b:amd64.
270s Preparing to unpack .../111-libharfbuzz0b_10.0.1-1_amd64.deb ...
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270s Selecting previously unselected package x11-common.
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270s Selecting previously unselected package libice6:amd64.
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270s Selecting previously unselected package libicu-dev:amd64.
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271s Selecting previously unselected package libjpeg-turbo8-dev:amd64.
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271s Selecting previously unselected package libjs-popper.js.
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271s Selecting previously unselected package liblapack-dev:amd64.
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271s Selecting previously unselected package liblua5.4-0:amd64.
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271s Selecting previously unselected package libncurses-dev:amd64.
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271s Selecting previously unselected package libthai-data.
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271s Selecting previously unselected package libthai0:amd64.
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271s Selecting previously unselected package libpango-1.0-0:amd64.
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271s Selecting previously unselected package libpangoft2-1.0-0:amd64.
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271s Selecting previously unselected package libpangocairo-1.0-0:amd64.
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272s Selecting previously unselected package libpaper1:amd64.
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272s Selecting previously unselected package libpaper-utils.
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272s Selecting previously unselected package libpcre2-16-0:amd64.
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272s Selecting previously unselected package libpcre2-32-0:amd64.
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272s Selecting previously unselected package libpcre2-posix3:amd64.
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272s Selecting previously unselected package libpcre2-dev:amd64.
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272s Selecting previously unselected package libpkgconf3:amd64.
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272s Selecting previously unselected package zlib1g-dev:amd64.
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272s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
272s Selecting previously unselected package libpng-dev:amd64.
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272s Selecting previously unselected package libreadline-dev:amd64.
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272s Unpacking libsm6:amd64 (2:1.2.4-1) ...
272s Selecting previously unselected package libtcl8.6:amd64.
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272s Selecting previously unselected package r-cran-littler.
272s Preparing to unpack .../162-r-cran-littler_0.3.20-1_amd64.deb ...
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273s Selecting previously unselected package node-bootstrap-sass.
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273s Selecting previously unselected package node-html5shiv.
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273s Selecting previously unselected package node-normalize.css.
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273s Selecting previously unselected package pandoc-data.
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273s Selecting previously unselected package liblzma-dev:amd64.
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273s Selecting previously unselected package libtirpc-dev:amd64.
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274s Selecting previously unselected package r-cran-base64enc.
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274s Selecting previously unselected package r-cran-bdsmatrix.
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274s Selecting previously unselected package r-cran-rlang.
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274s Selecting previously unselected package r-cran-fastmap.
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274s Selecting previously unselected package r-cran-cachem.
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274s Selecting previously unselected package r-cran-digest.
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274s Selecting previously unselected package r-cran-htmltools.
274s Preparing to unpack .../181-r-cran-htmltools_0.5.8.1-1_amd64.deb ...
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274s Selecting previously unselected package r-cran-jquerylib.
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274s Selecting previously unselected package r-cran-jsonlite.
274s Preparing to unpack .../183-r-cran-jsonlite_1.8.9+dfsg-1_amd64.deb ...
274s Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ...
274s Selecting previously unselected package r-cran-cli.
274s Preparing to unpack .../184-r-cran-cli_3.6.3-1_amd64.deb ...
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274s Selecting previously unselected package r-cran-glue.
274s Preparing to unpack .../185-r-cran-glue_1.7.0-1_amd64.deb ...
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274s Selecting previously unselected package r-cran-lifecycle.
274s Preparing to unpack .../186-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ...
274s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ...
274s Selecting previously unselected package r-cran-memoise.
274s Preparing to unpack .../187-r-cran-memoise_2.0.1-1_all.deb ...
274s Unpacking r-cran-memoise (2.0.1-1) ...
274s Selecting previously unselected package r-cran-mime.
274s Preparing to unpack .../188-r-cran-mime_0.12-2_amd64.deb ...
274s Unpacking r-cran-mime (0.12-2) ...
274s Selecting previously unselected package r-cran-fs.
274s Preparing to unpack .../189-r-cran-fs_1.6.4+dfsg-1_amd64.deb ...
274s Unpacking r-cran-fs (1.6.4+dfsg-1) ...
274s Selecting previously unselected package r-cran-r6.
274s Preparing to unpack .../190-r-cran-r6_2.5.1-1_all.deb ...
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274s Selecting previously unselected package r-cran-rappdirs.
274s Preparing to unpack .../191-r-cran-rappdirs_0.3.3-1_amd64.deb ...
274s Unpacking r-cran-rappdirs (0.3.3-1) ...
274s Selecting previously unselected package r-cran-sass.
274s Preparing to unpack .../192-r-cran-sass_0.4.9+dfsg-1_amd64.deb ...
274s Unpacking r-cran-sass (0.4.9+dfsg-1) ...
274s Selecting previously unselected package r-cran-bslib.
274s Preparing to unpack .../193-r-cran-bslib_0.7.0+dfsg-1_all.deb ...
274s Unpacking r-cran-bslib (0.7.0+dfsg-1) ...
274s Selecting previously unselected package r-cran-mass.
274s Preparing to unpack .../194-r-cran-mass_7.3-61-1_amd64.deb ...
274s Unpacking r-cran-mass (7.3-61-1) ...
274s Selecting previously unselected package r-cran-class.
274s Preparing to unpack .../195-r-cran-class_7.3-22-2build1_amd64.deb ...
274s Unpacking r-cran-class (7.3-22-2build1) ...
274s Selecting previously unselected package r-cran-proxy.
275s Preparing to unpack .../196-r-cran-proxy_0.4-27-1_amd64.deb ...
275s Unpacking r-cran-proxy (0.4-27-1) ...
275s Selecting previously unselected package r-cran-e1071.
275s Preparing to unpack .../197-r-cran-e1071_1.7-16-1_amd64.deb ...
275s Unpacking r-cran-e1071 (1.7-16-1) ...
275s Selecting previously unselected package r-cran-kernsmooth.
275s Preparing to unpack .../198-r-cran-kernsmooth_2.23-24-1_amd64.deb ...
275s Unpacking r-cran-kernsmooth (2.23-24-1) ...
275s Selecting previously unselected package r-cran-classint.
275s Preparing to unpack .../199-r-cran-classint_0.4-10+dfsg-1_amd64.deb ...
275s Unpacking r-cran-classint (0.4-10+dfsg-1) ...
275s Selecting previously unselected package r-cran-pkgkitten.
275s Preparing to unpack .../200-r-cran-pkgkitten_0.2.4-1_all.deb ...
275s Unpacking r-cran-pkgkitten (0.2.4-1) ...
275s Selecting previously unselected package r-cran-rcpp.
275s Preparing to unpack .../201-r-cran-rcpp_1.0.13-1-1_amd64.deb ...
275s Unpacking r-cran-rcpp (1.0.13-1-1) ...
275s Selecting previously unselected package r-cran-collapse.
275s Preparing to unpack .../202-r-cran-collapse_2.0.16-1_amd64.deb ...
275s Unpacking r-cran-collapse (2.0.16-1) ...
275s Selecting previously unselected package r-cran-commonmark.
275s Preparing to unpack .../203-r-cran-commonmark_1.9.1-1_amd64.deb ...
275s Unpacking r-cran-commonmark (1.9.1-1) ...
275s Selecting previously unselected package r-cran-crayon.
275s Preparing to unpack .../204-r-cran-crayon_1.5.2-1_all.deb ...
275s Unpacking r-cran-crayon (1.5.2-1) ...
275s Selecting previously unselected package r-cran-dbi.
275s Preparing to unpack .../205-r-cran-dbi_1.2.3-1_all.deb ...
275s Unpacking r-cran-dbi (1.2.3-1) ...
275s Selecting previously unselected package r-cran-evaluate.
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275s Unpacking r-cran-evaluate (1.0.0-1) ...
275s Selecting previously unselected package r-cran-fontawesome.
275s Preparing to unpack .../207-r-cran-fontawesome_0.5.2-1_all.deb ...
275s Unpacking r-cran-fontawesome (0.5.2-1) ...
275s Selecting previously unselected package r-cran-foreign.
275s Preparing to unpack .../208-r-cran-foreign_0.8.87-1_amd64.deb ...
275s Unpacking r-cran-foreign (0.8.87-1) ...
275s Selecting previously unselected package r-cran-formula.
275s Preparing to unpack .../209-r-cran-formula_1.2-5-1_all.deb ...
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275s Selecting previously unselected package r-cran-generics.
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275s Selecting previously unselected package r-cran-xfun.
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275s Selecting previously unselected package r-cran-highr.
275s Preparing to unpack .../212-r-cran-highr_0.11+dfsg-1_all.deb ...
275s Unpacking r-cran-highr (0.11+dfsg-1) ...
275s Selecting previously unselected package r-cran-later.
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275s Unpacking r-cran-later (1.3.2+dfsg-1) ...
275s Selecting previously unselected package r-cran-magrittr.
275s Preparing to unpack .../214-r-cran-magrittr_2.0.3-1_amd64.deb ...
275s Unpacking r-cran-magrittr (2.0.3-1) ...
275s Selecting previously unselected package r-cran-promises.
275s Preparing to unpack .../215-r-cran-promises_1.3.0+dfsg-1_amd64.deb ...
275s Unpacking r-cran-promises (1.3.0+dfsg-1) ...
275s Selecting previously unselected package r-cran-httpuv.
275s Preparing to unpack .../216-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ...
275s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ...
275s Selecting previously unselected package r-cran-intervals.
275s Preparing to unpack .../217-r-cran-intervals_0.15.5-1_amd64.deb ...
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275s Selecting previously unselected package r-cran-isocodes.
275s Preparing to unpack .../218-r-cran-isocodes_2024.02.12-1_all.deb ...
275s Unpacking r-cran-isocodes (2024.02.12-1) ...
275s Selecting previously unselected package r-cran-yaml.
275s Preparing to unpack .../219-r-cran-yaml_2.3.10-1_amd64.deb ...
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275s Selecting previously unselected package libjs-mathjax.
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276s Selecting previously unselected package r-cran-knitr.
276s Preparing to unpack .../221-r-cran-knitr_1.48+dfsg-1_all.deb ...
276s Unpacking r-cran-knitr (1.48+dfsg-1) ...
276s Selecting previously unselected package r-cran-lattice.
276s Preparing to unpack .../222-r-cran-lattice_0.22-6-1_amd64.deb ...
276s Unpacking r-cran-lattice (0.22-6-1) ...
276s Selecting previously unselected package r-cran-zoo.
276s Preparing to unpack .../223-r-cran-zoo_1.8-12-2_amd64.deb ...
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276s Selecting previously unselected package r-cran-lmtest.
276s Preparing to unpack .../224-r-cran-lmtest_0.9.40-1_amd64.deb ...
276s Unpacking r-cran-lmtest (0.9.40-1) ...
276s Selecting previously unselected package r-cran-maps.
276s Preparing to unpack .../225-r-cran-maps_3.4.2-1_amd64.deb ...
276s Unpacking r-cran-maps (3.4.2-1) ...
276s Selecting previously unselected package r-cran-mapdata.
276s Preparing to unpack .../226-r-cran-mapdata_2.3.1-1_amd64.deb ...
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277s Selecting previously unselected package r-cran-markdown.
277s Preparing to unpack .../227-r-cran-markdown_1.12+dfsg-2_all.deb ...
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277s Selecting previously unselected package r-cran-misctools.
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277s Unpacking r-cran-misctools (0.6-28-1) ...
277s Selecting previously unselected package r-cran-sandwich.
277s Preparing to unpack .../229-r-cran-sandwich_3.1-1-1_all.deb ...
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277s Selecting previously unselected package r-cran-maxlik.
277s Preparing to unpack .../230-r-cran-maxlik_1.5-2.1-1_all.deb ...
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277s Selecting previously unselected package r-cran-nlme.
277s Preparing to unpack .../231-r-cran-nlme_3.1.166-1_amd64.deb ...
277s Unpacking r-cran-nlme (3.1.166-1) ...
277s Selecting previously unselected package r-cran-rbibutils.
277s Preparing to unpack .../232-r-cran-rbibutils_2.3-1_amd64.deb ...
277s Unpacking r-cran-rbibutils (2.3-1) ...
277s Selecting previously unselected package r-cran-rdpack.
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277s Selecting previously unselected package r-cran-plm.
277s Preparing to unpack .../234-r-cran-plm_2.6-4-1_all.deb ...
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277s Selecting previously unselected package r-cran-sp.
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277s Unpacking r-cran-sp (1:2.1-4+dfsg-1) ...
277s Selecting previously unselected package r-cran-terra.
277s Preparing to unpack .../236-r-cran-terra_1.7-78-1_amd64.deb ...
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277s Selecting previously unselected package r-cran-raster.
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277s Selecting previously unselected package r-cran-rcolorbrewer.
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277s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ...
277s Selecting previously unselected package r-cran-tinytex.
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277s Unpacking r-cran-tinytex (0.53-1) ...
277s Selecting previously unselected package libjs-modernizr.
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277s Selecting previously unselected package r-cran-xtable.
277s Preparing to unpack .../241-r-cran-xtable_1%3a1.8-4-2_all.deb ...
277s Unpacking r-cran-xtable (1:1.8-4-2) ...
277s Selecting previously unselected package r-cran-sourcetools.
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277s Unpacking r-cran-sourcetools (0.1.7-1-1) ...
277s Selecting previously unselected package r-cran-withr.
277s Preparing to unpack .../243-r-cran-withr_3.0.2+dfsg-1_all.deb ...
277s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
277s Selecting previously unselected package libjs-twitter-bootstrap-datepicker.
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277s Selecting previously unselected package r-cran-shiny.
277s Preparing to unpack .../245-r-cran-shiny_1.9.1+dfsg-1_all.deb ...
277s Unpacking r-cran-shiny (1.9.1+dfsg-1) ...
277s Selecting previously unselected package r-cran-rmarkdown.
277s Preparing to unpack .../246-r-cran-rmarkdown_2.28+dfsg-1_all.deb ...
277s Unpacking r-cran-rmarkdown (2.28+dfsg-1) ...
277s Selecting previously unselected package r-cran-rpostgresql.
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277s Unpacking r-cran-rpostgresql (0.7-7+dfsg-1) ...
277s Selecting previously unselected package r-cran-wk.
277s Preparing to unpack .../248-r-cran-wk_0.9.4-1_amd64.deb ...
277s Unpacking r-cran-wk (0.9.4-1) ...
278s Selecting previously unselected package r-cran-s2.
278s Preparing to unpack .../249-r-cran-s2_1.1.7-1_amd64.deb ...
278s Unpacking r-cran-s2 (1.1.7-1) ...
278s Selecting previously unselected package r-cran-units.
278s Preparing to unpack .../250-r-cran-units_0.8-5+dfsg-1_amd64.deb ...
278s Unpacking r-cran-units (0.8-5+dfsg-1) ...
278s Selecting previously unselected package r-cran-sf.
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278s Unpacking r-cran-sf (1.0-16+dfsg-1build1) ...
278s Selecting previously unselected package r-cran-xts.
278s Preparing to unpack .../252-r-cran-xts_0.14.0-1_amd64.deb ...
278s Unpacking r-cran-xts (0.14.0-1) ...
278s Selecting previously unselected package r-cran-spacetime.
278s Preparing to unpack .../253-r-cran-spacetime_1.3-2-1_all.deb ...
278s Unpacking r-cran-spacetime (1.3-2-1) ...
278s Selecting previously unselected package autopkgtest-satdep.
278s Preparing to unpack .../254-2-autopkgtest-satdep.deb ...
278s Unpacking autopkgtest-satdep (0) ...
278s Setting up libjs-json (0~20221030+~1.0.8-1) ...
278s Setting up javascript-common (11+nmu1) ...
278s Setting up libgraphite2-3:amd64 (1.3.14-2ubuntu1) ...
278s Setting up liblcms2-2:amd64 (2.16-2) ...
278s Setting up libpixman-1-0:amd64 (0.44.0-3) ...
278s Setting up libsharpyuv0:amd64 (1.4.0-0.1) ...
278s Setting up libgpgmepp6t64:amd64 (1.24.0-2ubuntu1) ...
278s Setting up libpaper1:amd64 (1.1.29build1) ...
278s 
278s Creating config file /etc/papersize with new version
278s Setting up libaom3:amd64 (3.11.0-1) ...
278s Setting up mysql-common (5.8+1.1.1) ...
278s update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode
278s Setting up libmysqlclient21:amd64 (8.0.40-1) ...
278s Setting up libncurses-dev:amd64 (6.5-2) ...
278s Setting up fonts-mathjax (2.7.9+dfsg-1) ...
278s Setting up liblerc4:amd64 (4.0.0+ds-5ubuntu1) ...
278s Setting up proj-data (9.5.0-1) ...
278s Setting up libjs-mathjax (2.7.9+dfsg-1) ...
278s Setting up libxrender1:amd64 (1:0.9.10-1.1build1) ...
278s Setting up libdatrie1:amd64 (0.2.13-3build1) ...
278s Setting up libjs-popper.js (1.16.1+ds-6) ...
278s Setting up libogdi4.1:amd64 (4.1.1+ds-5) ...
278s Setting up libxcb-render0:amd64 (1.17.0-2) ...
278s Setting up libjs-sifter.js (0.6.0+dfsg-3) ...
278s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
278s Setting up unzip (6.0-28ubuntu6) ...
278s Setting up libgeos3.13.0:amd64 (3.13.0-1) ...
278s Setting up x11-common (1:7.7+23ubuntu3) ...
278s Setting up node-html5shiv (3.7.3+dfsg-5) ...
278s Setting up libpq5:amd64 (17.0-1) ...
278s Setting up libdeflate0:amd64 (1.22-1) ...
278s Setting up libqhull-r8.0:amd64 (2020.2-6build1) ...
278s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ...
278s Setting up libxcb-shm0:amd64 (1.17.0-2) ...
278s Setting up libpaper-utils (1.1.29build1) ...
278s Setting up libreadline-dev:amd64 (8.2-5) ...
278s Setting up libxerces-c3.2t64:amd64 (3.2.4+debian-1.3) ...
278s Setting up libgomp1:amd64 (14.2.0-8ubuntu1) ...
278s Setting up libjs-modernizr (3.13.0-0.1) ...
278s Setting up libjbig0:amd64 (2.1-6.1ubuntu2) ...
278s Setting up libpcre2-16-0:amd64 (10.42-4ubuntu3) ...
278s Setting up libaec0:amd64 (1.1.3-1) ...
278s Setting up gdal-data (3.9.3+dfsg-1build1) ...
278s Setting up libsnappy1v5:amd64 (1.2.1-1) ...
278s Setting up libjs-es5-shim (4.6.7-2) ...
278s Setting up zip (3.0-14ubuntu1) ...
278s Setting up libpcre2-32-0:amd64 (10.42-4ubuntu3) ...
278s Setting up libblas3:amd64 (3.12.0-3build2) ...
278s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
278s Setting up libtirpc-dev:amd64 (1.3.4+ds-1.3) ...
278s Setting up libpkgconf3:amd64 (1.8.1-4) ...
278s Setting up libcfitsio10t64:amd64 (4.4.1-2) ...
278s Setting up libquadmath0:amd64 (14.2.0-8ubuntu1) ...
278s Setting up libjs-d3 (3.5.17-4) ...
278s Setting up fonts-dejavu-mono (2.37-8) ...
278s Setting up libmpc3:amd64 (1.3.1-1build2) ...
278s Setting up libtcl8.6:amd64 (8.6.15+dfsg-2) ...
278s Setting up icu-devtools (74.2-1ubuntu4) ...
278s Setting up fonts-dejavu-core (2.37-8) ...
278s Setting up unixodbc-common (2.3.12-1ubuntu1) ...
278s Setting up pkgconf-bin (1.8.1-4) ...
278s Setting up libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ...
278s Setting up libltdl7:amd64 (2.4.7-8) ...
278s Setting up libgfortran5:amd64 (14.2.0-8ubuntu1) ...
278s Setting up libwebp7:amd64 (1.4.0-0.1) ...
278s Setting up liblzma-dev:amd64 (5.6.2-2) ...
278s Setting up libubsan1:amd64 (14.2.0-8ubuntu1) ...
278s Setting up libgif7:amd64 (5.2.2-1ubuntu1) ...
278s Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
278s Setting up libodbc2:amd64 (2.3.12-1ubuntu1) ...
278s Setting up liburiparser1:amd64 (0.9.8+dfsg-2) ...
278s Setting up libpcre2-posix3:amd64 (10.42-4ubuntu3) ...
278s Setting up libfyba0t64:amd64 (4.1.1-11build1) ...
278s Setting up libudunits2-data (2.2.28-7build1) ...
278s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ...
278s Setting up libminizip1t64:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
278s Setting up libhwasan0:amd64 (14.2.0-8ubuntu1) ...
278s Setting up libasan8:amd64 (14.2.0-8ubuntu1) ...
278s Setting up libblosc1:amd64 (1.21.5+ds-1build1) ...
278s Setting up liblua5.4-0:amd64 (5.4.6-3build2) ...
278s Setting up libopenjp2-7:amd64 (2.5.0-2ubuntu1) ...
278s Setting up libharfbuzz0b:amd64 (10.0.1-1) ...
278s Setting up libthai-data (0.1.29-2build1) ...
278s Setting up node-bootstrap-sass (3.4.3-2) ...
278s Setting up libjs-prettify (2015.12.04+dfsg-1.1) ...
278s Setting up libxss1:amd64 (1:1.2.3-1build3) ...
278s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ...
278s Setting up pandoc-data (3.1.11.1-3) ...
278s Setting up libtsan2:amd64 (14.2.0-8ubuntu1) ...
278s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
278s Setting up libisl23:amd64 (0.27-1) ...
278s Setting up libde265-0:amd64 (1.0.15-1build4) ...
278s Setting up libkmlbase1t64:amd64 (1.3.0-12build1) ...
278s Setting up libdeflate-dev:amd64 (1.22-1) ...
278s Setting up node-normalize.css (8.0.1-5) ...
278s Setting up libicu-dev:amd64 (74.2-1ubuntu4) ...
278s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ...
278s Setting up xdg-utils (1.2.1-0ubuntu1) ...
278s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
278s Setting up libcc1-0:amd64 (14.2.0-8ubuntu1) ...
278s Setting up liblsan0:amd64 (14.2.0-8ubuntu1) ...
278s Setting up libblas-dev:amd64 (3.12.0-3build2) ...
278s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode
278s Setting up libsz2:amd64 (1.1.3-1) ...
278s Setting up dctrl-tools (2.24-3build3) ...
278s Setting up libjs-bootstrap (3.4.1+dfsg-3) ...
278s Setting up libitm1:amd64 (14.2.0-8ubuntu1) ...
278s Setting up gdal-plugins:amd64 (3.9.3+dfsg-1build1) ...
278s Setting up libbz2-dev:amd64 (1.0.8-6) ...
278s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ...
278s Setting up libjpeg8:amd64 (8c-2ubuntu11) ...
278s Setting up libice6:amd64 (2:1.1.1-1) ...
278s Setting up libodbcinst2:amd64 (2.3.12-1ubuntu1) ...
278s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-3ubuntu2) ...
278s Setting up liblapack3:amd64 (3.12.0-3build2) ...
278s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
278s Setting up libudunits2-0 (2.2.28-7build1) ...
278s Setting up libarpack2t64:amd64 (3.9.1-1.1ubuntu1) ...
278s Setting up libpcre2-dev:amd64 (10.42-4ubuntu3) ...
278s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ...
279s Setting up libgeos-c1t64:amd64 (3.13.0-1) ...
279s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ...
279s Setting up libpng-dev:amd64 (1.6.44-2) ...
279s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ...
279s Setting up pkgconf:amd64 (1.8.1-4) ...
279s Setting up libkmldom1t64:amd64 (1.3.0-12build1) ...
279s Setting up libthai0:amd64 (0.1.29-2build1) ...
279s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ...
279s Setting up pandoc (3.1.11.1+ds-2) ...
279s Setting up liblapack-dev:amd64 (3.12.0-3build2) ...
279s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode
279s Setting up cpp-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ...
279s Setting up cpp-14 (14.2.0-8ubuntu1) ...
279s Setting up libhdf4-0-alt:amd64 (4.3.0-1) ...
279s Setting up librttopo1:amd64 (1.1.0-3build2) ...
279s Setting up libfreexl1:amd64 (2.0.0-1build2) ...
279s Setting up libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ...
279s Setting up libarmadillo14 (1:14.0.1+dfsg-2build1) ...
279s Setting up libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ...
279s Setting up libgcc-14-dev:amd64 (14.2.0-8ubuntu1) ...
279s Setting up libjpeg8-dev:amd64 (8c-2ubuntu11) ...
279s Setting up libhdf5-103-1t64:amd64 (1.10.10+repack-4ubuntu3) ...
279s Setting up libstdc++-14-dev:amd64 (14.2.0-8ubuntu1) ...
279s Setting up libsm6:amd64 (2:1.2.4-1) ...
279s Setting up cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ...
279s Setting up libgfortran-14-dev:amd64 (14.2.0-8ubuntu1) ...
279s Setting up libhdf5-hl-100t64:amd64 (1.10.10+repack-4ubuntu3) ...
279s Setting up fontconfig (2.15.0-1.1ubuntu2) ...
281s Regenerating fonts cache... done.
281s Setting up libnetcdf19t64:amd64 (1:4.9.2-6ubuntu1) ...
281s Setting up libxft2:amd64 (2.3.6-1build1) ...
281s Setting up libproj25:amd64 (9.5.0-1) ...
281s Setting up libtk8.6:amd64 (8.6.15-1) ...
281s Setting up libpango-1.0-0:amd64 (1.54.0+ds-3) ...
281s Setting up libjpeg-dev:amd64 (8c-2ubuntu11) ...
281s Setting up libkmlengine1t64:amd64 (1.3.0-12build1) ...
281s Setting up libcairo2:amd64 (1.18.2-2) ...
281s Setting up libgeotiff5:amd64 (1.7.3-1) ...
281s Setting up libxt6t64:amd64 (1:1.2.1-1.2build1) ...
281s Setting up cpp (4:14.1.0-2ubuntu1) ...
281s Setting up libpoppler140:amd64 (24.08.0-3) ...
281s Setting up gcc-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ...
281s Setting up libpangoft2-1.0-0:amd64 (1.54.0+ds-3) ...
281s Setting up libpangocairo-1.0-0:amd64 (1.54.0+ds-3) ...
281s Setting up libspatialite8t64:amd64 (5.1.0-3build1) ...
281s Setting up gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ...
281s Setting up gcc-14 (14.2.0-8ubuntu1) ...
281s Setting up gfortran-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ...
281s Setting up r-base-core (4.4.2-1) ...
281s 
281s Creating config file /etc/R/Renviron with new version
281s Setting up r-cran-crayon (1.5.2-1) ...
281s Setting up r-cran-sourcetools (0.1.7-1-1) ...
281s Setting up r-cran-lattice (0.22-6-1) ...
281s Setting up r-cran-nlme (3.1.166-1) ...
281s Setting up g++-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ...
281s Setting up r-cran-formula (1.2-5-1) ...
281s Setting up r-cran-intervals (0.15.5-1) ...
281s Setting up r-cran-isocodes (2024.02.12-1) ...
281s Setting up g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ...
281s Setting up r-cran-wk (0.9.4-1) ...
281s Setting up r-cran-commonmark (1.9.1-1) ...
281s Setting up g++-14 (14.2.0-8ubuntu1) ...
281s Setting up r-cran-proxy (0.4-27-1) ...
281s Setting up r-cran-r6 (2.5.1-1) ...
281s Setting up r-cran-pkgkitten (0.2.4-1) ...
281s Setting up gfortran-14 (14.2.0-8ubuntu1) ...
281s Setting up r-cran-magrittr (2.0.3-1) ...
281s Setting up r-cran-rappdirs (0.3.3-1) ...
281s Setting up r-cran-littler (0.3.20-1) ...
281s Setting up r-cran-fs (1.6.4+dfsg-1) ...
281s Setting up r-cran-rcpp (1.0.13-1-1) ...
281s Setting up r-cran-maps (3.4.2-1) ...
281s Setting up r-cran-rlang (1.1.4-1) ...
281s Setting up littler (0.3.20-1) ...
281s Setting up r-cran-xfun (0.49+dfsg-1) ...
281s Setting up r-cran-withr (3.0.2+dfsg-1) ...
281s Setting up r-cran-mime (0.12-2) ...
281s Setting up r-cran-generics (0.1.3-1) ...
281s Setting up r-cran-base64enc (0.1-3-3) ...
281s Setting up r-cran-s2 (1.1.7-1) ...
281s Setting up r-cran-digest (0.6.37-1) ...
281s Setting up r-cran-yaml (2.3.10-1) ...
281s Setting up r-cran-evaluate (1.0.0-1) ...
281s Setting up r-cran-dbi (1.2.3-1) ...
281s Setting up r-cran-highr (0.11+dfsg-1) ...
281s Setting up r-cran-mass (7.3-61-1) ...
281s Setting up r-cran-mapdata (2.3.1-1) ...
281s Setting up r-cran-collapse (2.0.16-1) ...
281s Setting up r-cran-bdsmatrix (1.3-7-1) ...
281s Setting up r-cran-glue (1.7.0-1) ...
281s Setting up r-cran-foreign (0.8.87-1) ...
281s Setting up gfortran-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ...
281s Setting up r-cran-xtable (1:1.8-4-2) ...
281s Setting up r-cran-cli (3.6.3-1) ...
281s Setting up r-cran-rbibutils (2.3-1) ...
281s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
281s Setting up gcc (4:14.1.0-2ubuntu1) ...
281s Setting up r-cran-fastmap (1.2.0-1) ...
281s Setting up r-cran-jsonlite (1.8.9+dfsg-1) ...
281s Setting up r-cran-sp (1:2.1-4+dfsg-1) ...
281s Setting up r-cran-markdown (1.12+dfsg-2) ...
281s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ...
281s Setting up r-cran-zoo (1.8-12-2) ...
281s Setting up r-cran-units (0.8-5+dfsg-1) ...
281s Setting up r-cran-later (1.3.2+dfsg-1) ...
281s Setting up r-cran-htmltools (0.5.8.1-1) ...
281s Setting up r-cran-tinytex (0.53-1) ...
281s Setting up r-cran-kernsmooth (2.23-24-1) ...
281s Setting up r-cran-knitr (1.48+dfsg-1) ...
281s Setting up g++ (4:14.1.0-2ubuntu1) ...
281s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
281s Setting up r-cran-rpostgresql (0.7-7+dfsg-1) ...
281s Setting up r-cran-cachem (1.1.0-1) ...
281s Setting up r-cran-lmtest (0.9.40-1) ...
281s Setting up r-cran-sass (0.4.9+dfsg-1) ...
281s Setting up build-essential (12.10ubuntu1) ...
281s Setting up r-cran-misctools (0.6-28-1) ...
281s Setting up r-cran-class (7.3-22-2build1) ...
281s Setting up r-cran-sandwich (3.1-1-1) ...
281s Setting up r-cran-fontawesome (0.5.2-1) ...
281s Setting up r-cran-xts (0.14.0-1) ...
281s Setting up r-cran-rdpack (2.6.2-1) ...
281s Setting up gfortran (4:14.1.0-2ubuntu1) ...
281s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
281s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
281s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
281s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
281s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ...
281s Setting up r-cran-memoise (2.0.1-1) ...
281s Setting up r-cran-promises (1.3.0+dfsg-1) ...
281s Setting up r-cran-e1071 (1.7-16-1) ...
281s Setting up r-cran-maxlik (1.5-2.1-1) ...
281s Setting up r-cran-spacetime (1.3-2-1) ...
281s Setting up r-base-dev (4.4.2-1) ...
281s Setting up r-cran-httpuv (1.6.15+dfsg-1) ...
281s Setting up r-cran-plm (2.6-4-1) ...
281s Setting up r-cran-classint (0.4-10+dfsg-1) ...
281s Setting up r-cran-bslib (0.7.0+dfsg-1) ...
281s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
281s Setting up r-cran-shiny (1.9.1+dfsg-1) ...
281s Setting up r-cran-rmarkdown (2.28+dfsg-1) ...
281s Setting up libheif-plugin-aomdec:amd64 (1.19.3-1) ...
281s Setting up libheif-plugin-libde265:amd64 (1.19.3-1) ...
281s Setting up libheif1:amd64 (1.19.3-1) ...
281s Setting up libgdal35:amd64 (3.9.3+dfsg-1build1) ...
281s Setting up r-cran-terra (1.7-78-1) ...
281s Setting up r-cran-sf (1.0-16+dfsg-1build1) ...
281s Setting up r-cran-raster (3.6-30-1) ...
281s Setting up autopkgtest-satdep (0) ...
281s Processing triggers for libc-bin (2.40-1ubuntu3) ...
281s Processing triggers for man-db (2.13.0-1) ...
283s Processing triggers for install-info (7.1.1-1) ...
290s (Reading database ... 94103 files and directories currently installed.)
290s Removing autopkgtest-satdep (0) ...
293s autopkgtest [20:54:17]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
293s autopkgtest [20:54:17]: test pkg-r-autopkgtest: [-----------------------
293s Test: Try to load the R library spacetime
293s 
293s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
293s Copyright (C) 2024 The R Foundation for Statistical Computing
293s Platform: x86_64-pc-linux-gnu
293s 
293s R is free software and comes with ABSOLUTELY NO WARRANTY.
293s You are welcome to redistribute it under certain conditions.
293s Type 'license()' or 'licence()' for distribution details.
293s 
293s R is a collaborative project with many contributors.
293s Type 'contributors()' for more information and
293s 'citation()' on how to cite R or R packages in publications.
293s 
293s Type 'demo()' for some demos, 'help()' for on-line help, or
293s 'help.start()' for an HTML browser interface to help.
293s Type 'q()' to quit R.
293s 
293s > library('spacetime')
294s > 
294s > 
294s Other tests are currently unsupported!
294s They will be progressively added.
294s autopkgtest [20:54:18]: test pkg-r-autopkgtest: -----------------------]
294s pkg-r-autopkgtest    PASS
294s autopkgtest [20:54:18]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
295s autopkgtest [20:54:19]: @@@@@@@@@@@@@@@@@@@@ summary
295s run-unit-test        FAIL non-zero exit status 1
295s pkg-r-autopkgtest    PASS
306s nova [W] Skipping flock for amd64
306s Creating nova instance adt-plucky-amd64-r-cran-spacetime-20241123-204924-juju-7f2275-prod-proposed-migration-environment-20-81913f36-6889-468c-ab09-ad4e0be410bf from image adt/ubuntu-plucky-amd64-server-20241119.img (UUID 2e5306de-7efa-448c-bc27-5518979e66f0)...
306s nova [W] Skipping flock for amd64
306s Creating nova instance adt-plucky-amd64-r-cran-spacetime-20241123-204924-juju-7f2275-prod-proposed-migration-environment-20-81913f36-6889-468c-ab09-ad4e0be410bf from image adt/ubuntu-plucky-amd64-server-20241119.img (UUID 2e5306de-7efa-448c-bc27-5518979e66f0)...