0s autopkgtest [16:04:46]: starting date and time: 2024-11-09 16:04:46+0000 0s autopkgtest [16:04:46]: git checkout: 0acbae0a WIP show VirtSubproc stderr in real-time 0s autopkgtest [16:04:46]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ahhtzgbo/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-rmarkdown,src:r-cran-spacetime --apt-upgrade r-cran-spacetime --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-cran-rmarkdown/2.28+dfsg-1 r-cran-spacetime/1.3-2-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-9.secgroup --name adt-plucky-amd64-r-cran-spacetime-20241109-160446-juju-7f2275-prod-proposed-migration-environment-2-4940ee92-0764-464f-b1b7-caca74fea485 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 42s autopkgtest [16:05:28]: testbed dpkg architecture: amd64 42s autopkgtest [16:05:28]: testbed apt version: 2.9.8 42s autopkgtest [16:05:28]: @@@@@@@@@@@@@@@@@@@@ test bed setup 43s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 44s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [998 kB] 44s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 44s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB] 44s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [104 kB] 44s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [106 kB] 44s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [156 kB] 44s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [32.6 kB] 44s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [327 kB] 44s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [748 kB] 44s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [37.7 kB] 44s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [13.0 kB] 44s Fetched 2618 kB in 1s (2814 kB/s) 44s Reading package lists... 47s Reading package lists... 47s Building dependency tree... 47s Reading state information... 47s Calculating upgrade... 47s The following NEW packages will be installed: 47s systemd-cryptsetup 47s The following packages will be upgraded: 47s base-passwd bash-completion libattr1 libbpf1 libbsd0 libbytesize-common 47s libbytesize1 libdrm-common libdrm2 libjson-glib-1.0-0 47s libjson-glib-1.0-common libmaxminddb0 libmnl0 libnghttp2-14 libnspr4 47s libnss-systemd libpam-systemd libpython3.12-minimal libpython3.12-stdlib 47s libpython3.12t64 libsystemd-shared libsystemd0 libudev1 libudisks2-0 47s liburcu8t64 linux-firmware openssh-client openssh-server openssh-sftp-server 47s pci.ids python3-gi python3-idna python3-jsonpatch python3-lazr.restfulclient 47s python3-urllib3 python3-wadllib python3.12 python3.12-gdbm 47s python3.12-minimal systemd systemd-resolved systemd-sysv systemd-timesyncd 47s udev udisks2 usbutils 47s 46 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 47s Need to get 558 MB of archives. 47s After this operation, 29.4 MB of additional disk space will be used. 47s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 base-passwd amd64 3.6.5 [53.4 kB] 48s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.12t64 amd64 3.12.7-2 [2372 kB] 48s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12 amd64 3.12.7-2 [661 kB] 48s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.12-stdlib amd64 3.12.7-2 [2079 kB] 48s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12-minimal amd64 3.12.7-2 [2345 kB] 48s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.12-minimal amd64 3.12.7-2 [836 kB] 48s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libnss-systemd amd64 256.5-2ubuntu4 [191 kB] 48s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-timesyncd amd64 256.5-2ubuntu4 [40.8 kB] 48s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-resolved amd64 256.5-2ubuntu4 [339 kB] 48s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd-shared amd64 256.5-2ubuntu4 [2289 kB] 48s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd0 amd64 256.5-2ubuntu4 [511 kB] 48s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-sysv amd64 256.5-2ubuntu4 [11.9 kB] 48s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-systemd amd64 256.5-2ubuntu4 [288 kB] 49s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd amd64 256.5-2ubuntu4 [3587 kB] 49s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 udev amd64 256.5-2ubuntu4 [2081 kB] 49s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libudev1 amd64 256.5-2ubuntu4 [209 kB] 49s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-sftp-server amd64 1:9.7p1-7ubuntu5 [40.8 kB] 49s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-server amd64 1:9.7p1-7ubuntu5 [583 kB] 49s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-client amd64 1:9.7p1-7ubuntu5 [1027 kB] 49s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libattr1 amd64 1:2.5.2-2 [12.1 kB] 49s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libbsd0 amd64 0.12.2-2 [49.9 kB] 49s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libbpf1 amd64 1:1.4.6-1 [184 kB] 49s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libmnl0 amd64 1.0.5-3 [12.6 kB] 49s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-3 [250 kB] 49s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 bash-completion all 1:2.14.0-2 [210 kB] 49s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libdrm-common all 2.4.123-1 [8436 B] 49s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libdrm2 amd64 2.4.123-1 [43.7 kB] 49s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libmaxminddb0 amd64 1.11.0-1 [19.9 kB] 49s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libnghttp2-14 amd64 1.64.0-1 [80.7 kB] 49s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 liburcu8t64 amd64 0.14.1-1 [68.6 kB] 49s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 pci.ids all 0.0~2024.10.24-1 [279 kB] 49s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12-gdbm amd64 3.12.7-2 [30.4 kB] 49s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 usbutils amd64 1:018-1 [84.5 kB] 49s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libbytesize1 amd64 2.11-1ubuntu1 [14.0 kB] 49s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libbytesize-common all 2.11-1ubuntu1 [3584 B] 49s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libjson-glib-1.0-common all 1.10.0+ds-2 [5502 B] 49s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libjson-glib-1.0-0 amd64 1.10.0+ds-2 [72.8 kB] 49s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libnspr4 amd64 2:4.35-1.1ubuntu2 [118 kB] 49s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 udisks2 amd64 2.10.1-11ubuntu1 [326 kB] 49s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libudisks2-0 amd64 2.10.1-11ubuntu1 [176 kB] 49s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-firmware amd64 20241108.git3bbb13a7-0ubuntu1 [536 MB] 75s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-idna all 3.8-2 [47.0 kB] 75s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jsonpatch all 1.32-4 [12.2 kB] 75s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-wadllib all 2.0.0-1 [36.7 kB] 75s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lazr.restfulclient all 0.14.6-2 [50.9 kB] 75s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-urllib3 all 2.0.7-2ubuntu0.1 [93.1 kB] 75s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-cryptsetup amd64 256.5-2ubuntu4 [120 kB] 76s Preconfiguring packages ... 76s Fetched 558 MB in 28s (19.9 MB/s) 76s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75312 files and directories currently installed.) 76s Preparing to unpack .../base-passwd_3.6.5_amd64.deb ... 76s Unpacking base-passwd (3.6.5) over (3.6.4) ... 76s Setting up base-passwd (3.6.5) ... 76s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75313 files and directories currently installed.) 76s Preparing to unpack .../0-libpython3.12t64_3.12.7-2_amd64.deb ... 76s Unpacking libpython3.12t64:amd64 (3.12.7-2) over (3.12.7-1) ... 76s Preparing to unpack .../1-python3.12_3.12.7-2_amd64.deb ... 76s Unpacking python3.12 (3.12.7-2) over (3.12.7-1) ... 76s Preparing to unpack .../2-libpython3.12-stdlib_3.12.7-2_amd64.deb ... 76s Unpacking libpython3.12-stdlib:amd64 (3.12.7-2) over (3.12.7-1) ... 76s Preparing to unpack .../3-python3.12-minimal_3.12.7-2_amd64.deb ... 76s Unpacking python3.12-minimal (3.12.7-2) over (3.12.7-1) ... 77s Preparing to unpack .../4-libpython3.12-minimal_3.12.7-2_amd64.deb ... 77s Unpacking libpython3.12-minimal:amd64 (3.12.7-2) over (3.12.7-1) ... 77s Preparing to unpack .../5-libnss-systemd_256.5-2ubuntu4_amd64.deb ... 77s Unpacking libnss-systemd:amd64 (256.5-2ubuntu4) over (256.5-2ubuntu3) ... 77s Preparing to unpack .../6-systemd-timesyncd_256.5-2ubuntu4_amd64.deb ... 77s Unpacking systemd-timesyncd (256.5-2ubuntu4) over (256.5-2ubuntu3) ... 77s Preparing to unpack .../7-systemd-resolved_256.5-2ubuntu4_amd64.deb ... 77s Unpacking systemd-resolved (256.5-2ubuntu4) over (256.5-2ubuntu3) ... 77s Preparing to unpack .../8-libsystemd-shared_256.5-2ubuntu4_amd64.deb ... 77s Unpacking libsystemd-shared:amd64 (256.5-2ubuntu4) over (256.5-2ubuntu3) ... 77s Preparing to unpack .../9-libsystemd0_256.5-2ubuntu4_amd64.deb ... 77s Unpacking libsystemd0:amd64 (256.5-2ubuntu4) over (256.5-2ubuntu3) ... 77s Setting up libsystemd0:amd64 (256.5-2ubuntu4) ... 77s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75313 files and directories currently installed.) 77s Preparing to unpack .../systemd-sysv_256.5-2ubuntu4_amd64.deb ... 77s Unpacking systemd-sysv (256.5-2ubuntu4) over (256.5-2ubuntu3) ... 77s Preparing to unpack .../libpam-systemd_256.5-2ubuntu4_amd64.deb ... 77s Unpacking libpam-systemd:amd64 (256.5-2ubuntu4) over (256.5-2ubuntu3) ... 77s Preparing to unpack .../systemd_256.5-2ubuntu4_amd64.deb ... 77s Unpacking systemd (256.5-2ubuntu4) over (256.5-2ubuntu3) ... 77s Preparing to unpack .../udev_256.5-2ubuntu4_amd64.deb ... 77s Unpacking udev (256.5-2ubuntu4) over (256.5-2ubuntu3) ... 78s Preparing to unpack .../libudev1_256.5-2ubuntu4_amd64.deb ... 78s Unpacking libudev1:amd64 (256.5-2ubuntu4) over (256.5-2ubuntu3) ... 78s Setting up libudev1:amd64 (256.5-2ubuntu4) ... 78s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75313 files and directories currently installed.) 78s Preparing to unpack .../openssh-sftp-server_1%3a9.7p1-7ubuntu5_amd64.deb ... 78s Unpacking openssh-sftp-server (1:9.7p1-7ubuntu5) over (1:9.7p1-7ubuntu4) ... 78s Preparing to unpack .../openssh-server_1%3a9.7p1-7ubuntu5_amd64.deb ... 78s Unpacking openssh-server (1:9.7p1-7ubuntu5) over (1:9.7p1-7ubuntu4) ... 78s Preparing to unpack .../openssh-client_1%3a9.7p1-7ubuntu5_amd64.deb ... 78s Unpacking openssh-client (1:9.7p1-7ubuntu5) over (1:9.7p1-7ubuntu4) ... 78s Preparing to unpack .../libattr1_1%3a2.5.2-2_amd64.deb ... 78s Unpacking libattr1:amd64 (1:2.5.2-2) over (1:2.5.2-1build2) ... 78s Setting up libattr1:amd64 (1:2.5.2-2) ... 78s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75313 files and directories currently installed.) 78s Preparing to unpack .../libbsd0_0.12.2-2_amd64.deb ... 78s Unpacking libbsd0:amd64 (0.12.2-2) over (0.12.2-1) ... 78s Setting up libbsd0:amd64 (0.12.2-2) ... 78s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75313 files and directories currently installed.) 78s Preparing to unpack .../00-libbpf1_1%3a1.4.6-1_amd64.deb ... 78s Unpacking libbpf1:amd64 (1:1.4.6-1) over (1:1.4.5-1) ... 78s Preparing to unpack .../01-libmnl0_1.0.5-3_amd64.deb ... 78s Unpacking libmnl0:amd64 (1.0.5-3) over (1.0.5-2build1) ... 78s Preparing to unpack .../02-python3-gi_3.50.0-3_amd64.deb ... 78s Unpacking python3-gi (3.50.0-3) over (3.48.2-1) ... 78s Preparing to unpack .../03-bash-completion_1%3a2.14.0-2_all.deb ... 78s Unpacking bash-completion (1:2.14.0-2) over (1:2.14.0-1) ... 78s Preparing to unpack .../04-libdrm-common_2.4.123-1_all.deb ... 78s Unpacking libdrm-common (2.4.123-1) over (2.4.122-1) ... 78s Preparing to unpack .../05-libdrm2_2.4.123-1_amd64.deb ... 78s Unpacking libdrm2:amd64 (2.4.123-1) over (2.4.122-1) ... 78s Preparing to unpack .../06-libmaxminddb0_1.11.0-1_amd64.deb ... 78s Unpacking libmaxminddb0:amd64 (1.11.0-1) over (1.10.0-1) ... 79s Preparing to unpack .../07-libnghttp2-14_1.64.0-1_amd64.deb ... 79s Unpacking libnghttp2-14:amd64 (1.64.0-1) over (1.62.1-2) ... 79s Preparing to unpack .../08-liburcu8t64_0.14.1-1_amd64.deb ... 79s Unpacking liburcu8t64:amd64 (0.14.1-1) over (0.14.0-4) ... 79s Preparing to unpack .../09-pci.ids_0.0~2024.10.24-1_all.deb ... 79s Unpacking pci.ids (0.0~2024.10.24-1) over (0.0~2024.09.12-1) ... 79s Preparing to unpack .../10-python3.12-gdbm_3.12.7-2_amd64.deb ... 79s Unpacking python3.12-gdbm (3.12.7-2) over (3.12.7-1) ... 79s Preparing to unpack .../11-usbutils_1%3a018-1_amd64.deb ... 79s Unpacking usbutils (1:018-1) over (1:017-3build1) ... 79s Preparing to unpack .../12-libbytesize1_2.11-1ubuntu1_amd64.deb ... 79s Unpacking libbytesize1:amd64 (2.11-1ubuntu1) over (2.10-1ubuntu2) ... 79s Preparing to unpack .../13-libbytesize-common_2.11-1ubuntu1_all.deb ... 79s Unpacking libbytesize-common (2.11-1ubuntu1) over (2.10-1ubuntu2) ... 79s Preparing to unpack .../14-libjson-glib-1.0-common_1.10.0+ds-2_all.deb ... 79s Unpacking libjson-glib-1.0-common (1.10.0+ds-2) over (1.8.0-2build2) ... 79s Preparing to unpack .../15-libjson-glib-1.0-0_1.10.0+ds-2_amd64.deb ... 79s Unpacking libjson-glib-1.0-0:amd64 (1.10.0+ds-2) over (1.8.0-2build2) ... 79s Preparing to unpack .../16-libnspr4_2%3a4.35-1.1ubuntu2_amd64.deb ... 79s Unpacking libnspr4:amd64 (2:4.35-1.1ubuntu2) over (2:4.35-1.1ubuntu1) ... 79s Preparing to unpack .../17-udisks2_2.10.1-11ubuntu1_amd64.deb ... 79s Unpacking udisks2 (2.10.1-11ubuntu1) over (2.10.1-9ubuntu2) ... 79s Preparing to unpack .../18-libudisks2-0_2.10.1-11ubuntu1_amd64.deb ... 79s Unpacking libudisks2-0:amd64 (2.10.1-11ubuntu1) over (2.10.1-9ubuntu2) ... 79s Preparing to unpack .../19-linux-firmware_20241108.git3bbb13a7-0ubuntu1_amd64.deb ... 79s Unpacking linux-firmware (20241108.git3bbb13a7-0ubuntu1) over (20240913.gita34e7a5f-0ubuntu2) ... 81s Preparing to unpack .../20-python3-idna_3.8-2_all.deb ... 81s Unpacking python3-idna (3.8-2) over (3.6-2.1) ... 81s Preparing to unpack .../21-python3-jsonpatch_1.32-4_all.deb ... 81s Unpacking python3-jsonpatch (1.32-4) over (1.32-3) ... 81s Preparing to unpack .../22-python3-wadllib_2.0.0-1_all.deb ... 81s Unpacking python3-wadllib (2.0.0-1) over (1.3.6-5) ... 81s Preparing to unpack .../23-python3-lazr.restfulclient_0.14.6-2_all.deb ... 82s Unpacking python3-lazr.restfulclient (0.14.6-2) over (0.14.6-1) ... 82s Preparing to unpack .../24-python3-urllib3_2.0.7-2ubuntu0.1_all.deb ... 82s Unpacking python3-urllib3 (2.0.7-2ubuntu0.1) over (2.0.7-2) ... 82s Selecting previously unselected package systemd-cryptsetup. 82s Preparing to unpack .../25-systemd-cryptsetup_256.5-2ubuntu4_amd64.deb ... 82s Unpacking systemd-cryptsetup (256.5-2ubuntu4) ... 82s Setting up liburcu8t64:amd64 (0.14.1-1) ... 82s Setting up pci.ids (0.0~2024.10.24-1) ... 82s Setting up linux-firmware (20241108.git3bbb13a7-0ubuntu1) ... 82s Setting up openssh-client (1:9.7p1-7ubuntu5) ... 82s Setting up libmaxminddb0:amd64 (1.11.0-1) ... 82s Setting up python3.12-gdbm (3.12.7-2) ... 82s Setting up python3-jsonpatch (1.32-4) ... 82s Setting up libpython3.12-minimal:amd64 (3.12.7-2) ... 82s Setting up libnghttp2-14:amd64 (1.64.0-1) ... 82s Setting up usbutils (1:018-1) ... 82s Setting up libnspr4:amd64 (2:4.35-1.1ubuntu2) ... 82s Setting up bash-completion (1:2.14.0-2) ... 82s Setting up python3-wadllib (2.0.0-1) ... 82s Setting up python3-gi (3.50.0-3) ... 82s Setting up libbytesize-common (2.11-1ubuntu1) ... 82s Setting up libmnl0:amd64 (1.0.5-3) ... 82s Setting up python3-idna (3.8-2) ... 82s Setting up libsystemd-shared:amd64 (256.5-2ubuntu4) ... 82s Setting up python3-urllib3 (2.0.7-2ubuntu0.1) ... 82s Setting up libjson-glib-1.0-common (1.10.0+ds-2) ... 82s Setting up libbytesize1:amd64 (2.11-1ubuntu1) ... 82s Setting up python3-lazr.restfulclient (0.14.6-2) ... 82s Setting up libdrm-common (2.4.123-1) ... 82s Setting up libbpf1:amd64 (1:1.4.6-1) ... 82s Setting up libudisks2-0:amd64 (2.10.1-11ubuntu1) ... 82s Setting up python3.12-minimal (3.12.7-2) ... 83s Setting up openssh-sftp-server (1:9.7p1-7ubuntu5) ... 83s Setting up libpython3.12-stdlib:amd64 (3.12.7-2) ... 83s Setting up openssh-server (1:9.7p1-7ubuntu5) ... 84s Setting up python3.12 (3.12.7-2) ... 85s Setting up systemd (256.5-2ubuntu4) ... 85s /usr/lib/tmpfiles.d/legacy.conf:13: Duplicate line for path "/run/lock", ignoring. 85s Created symlink '/run/systemd/system/tmp.mount' → '/dev/null'. 85s /usr/lib/tmpfiles.d/legacy.conf:13: Duplicate line for path "/run/lock", ignoring. 85s Setting up libjson-glib-1.0-0:amd64 (1.10.0+ds-2) ... 85s Setting up libpython3.12t64:amd64 (3.12.7-2) ... 85s Setting up systemd-cryptsetup (256.5-2ubuntu4) ... 85s Setting up systemd-timesyncd (256.5-2ubuntu4) ... 86s systemd-time-wait-sync.service is a disabled or a static unit not running, not starting it. 86s Setting up udev (256.5-2ubuntu4) ... 87s Setting up libdrm2:amd64 (2.4.123-1) ... 87s Setting up systemd-resolved (256.5-2ubuntu4) ... 87s Setting up udisks2 (2.10.1-11ubuntu1) ... 87s Setting up systemd-sysv (256.5-2ubuntu4) ... 87s Setting up libnss-systemd:amd64 (256.5-2ubuntu4) ... 87s Setting up libpam-systemd:amd64 (256.5-2ubuntu4) ... 88s Processing triggers for libc-bin (2.40-1ubuntu3) ... 88s Processing triggers for ufw (0.36.2-8) ... 88s Processing triggers for man-db (2.12.1-3) ... 89s Processing triggers for dbus (1.14.10-4ubuntu5) ... 89s Processing triggers for shared-mime-info (2.4-5) ... 89s Processing triggers for initramfs-tools (0.142ubuntu34) ... 89s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic 89s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 97s Reading package lists... 97s Building dependency tree... 97s Reading state information... 97s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 97s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 97s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 97s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 97s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 98s Reading package lists... 98s Reading package lists... 98s Building dependency tree... 98s Reading state information... 99s Calculating upgrade... 99s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 99s Reading package lists... 99s Building dependency tree... 99s Reading state information... 99s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 99s autopkgtest [16:06:25]: rebooting testbed after setup commands that affected boot 103s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 117s autopkgtest [16:06:43]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 13:41:20 UTC 2024 119s autopkgtest [16:06:45]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-spacetime 121s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-spacetime 1.3-2-1 (dsc) [2400 B] 121s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-spacetime 1.3-2-1 (tar) [2319 kB] 121s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-spacetime 1.3-2-1 (diff) [3240 B] 121s gpgv: Signature made Tue Oct 1 00:22:51 2024 UTC 121s gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 121s gpgv: issuer "plessy@debian.org" 121s gpgv: Can't check signature: No public key 121s dpkg-source: warning: cannot verify inline signature for ./r-cran-spacetime_1.3-2-1.dsc: no acceptable signature found 122s autopkgtest [16:06:48]: testing package r-cran-spacetime version 1.3-2-1 122s autopkgtest [16:06:48]: build not needed 123s autopkgtest [16:06:49]: test run-unit-test: preparing testbed 124s Reading package lists... 124s Building dependency tree... 124s Reading state information... 124s Starting pkgProblemResolver with broken count: 0 124s Starting 2 pkgProblemResolver with broken count: 0 124s Done 125s The following additional packages will be installed: 125s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 125s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax gdal-data 125s gdal-plugins javascript-common libaec0 libaom3 libarmadillo14 libarpack2t64 125s libblas3 libblosc1 libcairo2 libcfitsio10t64 libdatrie1 libde265-0 125s libdeflate0 libfontconfig1 libfreexl1 libfyba0t64 libgdal35 libgeos-c1t64 125s libgeos3.12.2 libgeotiff5 libgfortran5 libgif7 libgomp1 libgraphite2-3 125s libharfbuzz0b libhdf4-0-alt libhdf5-103-1t64 libhdf5-hl-100t64 125s libheif-plugin-aomdec libheif-plugin-libde265 libheif1 libice6 libjbig0 125s libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-bootstrap4 libjs-d3 125s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 125s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax 125s libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify 125s libjs-sifter.js libjs-twitter-bootstrap-datepicker libkmlbase1t64 125s libkmldom1t64 libkmlengine1t64 liblapack3 liblcms2-2 liblerc4 libltdl7 125s liblua5.4-0 libminizip1t64 libmysqlclient21 libnetcdf19t64 libodbc2 125s libodbcinst2 libogdi4.1 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 125s libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libpoppler140 125s libpq5 libproj25 libqhull-r8.0 librttopo1 libsharpyuv0 libsm6 libsnappy1v5 125s libspatialite8t64 libsuperlu6 libsz2 libtcl8.6 libthai-data libthai0 125s libtiff6 libtk8.6 libudunits2-0 libudunits2-data liburiparser1 libwebp7 125s libxcb-render0 libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1 125s libxt6t64 littler mysql-common node-bootstrap-sass node-html5shiv 125s node-normalize.css pandoc pandoc-data proj-data r-base-core r-cran-abind 125s r-cran-base64enc r-cran-bdsmatrix r-cran-bslib r-cran-cachem r-cran-class 125s r-cran-classint r-cran-cli r-cran-collapse r-cran-commonmark r-cran-crayon 125s r-cran-dbi r-cran-digest r-cran-e1071 r-cran-evaluate r-cran-fastmap 125s r-cran-fnn r-cran-fontawesome r-cran-foreign r-cran-formula r-cran-fs 125s r-cran-generics r-cran-glue r-cran-gstat r-cran-highr r-cran-htmltools 125s r-cran-httpuv r-cran-intervals r-cran-isocodes r-cran-jquerylib 125s r-cran-jsonlite r-cran-kernsmooth r-cran-knitr r-cran-later r-cran-lattice 125s r-cran-lifecycle r-cran-littler r-cran-lmtest r-cran-magrittr r-cran-mapdata 125s r-cran-maps r-cran-markdown r-cran-mass r-cran-maxlik r-cran-memoise 125s r-cran-mime r-cran-misctools r-cran-nlme r-cran-pkgkitten r-cran-plm 125s r-cran-promises r-cran-proxy r-cran-r6 r-cran-rappdirs r-cran-raster 125s r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp r-cran-rdpack r-cran-rlang 125s r-cran-rmarkdown r-cran-rpostgresql r-cran-s2 r-cran-sandwich r-cran-sass 125s r-cran-sf r-cran-sftime r-cran-shiny r-cran-sourcetools r-cran-sp 125s r-cran-spacetime r-cran-stars r-cran-terra r-cran-tinytex r-cran-units 125s r-cran-withr r-cran-wk r-cran-xfun r-cran-xtable r-cran-xts r-cran-yaml 125s r-cran-zoo unixodbc-common unzip x11-common xdg-utils zip 125s Suggested packages: 125s apache2 | lighttpd | httpd geotiff-bin gdal-bin libgeotiff-epsg 125s libhdf4-alt-dev hdf4-tools libheif-plugin-x265 libheif-plugin-ffmpegdec 125s libheif-plugin-jpegdec libheif-plugin-jpegenc libheif-plugin-j2kdec 125s libheif-plugin-j2kenc libheif-plugin-kvazaar libheif-plugin-rav1e 125s libheif-plugin-svtenc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 125s libjs-mathjax-doc liblcms2-utils odbc-postgresql tdsodbc ogdi-bin proj-bin 125s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 125s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 125s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 125s r-doc-info | r-doc-pdf r-mathlib r-base-html r-cran-rstudioapi r-cran-rmysql 125s r-cran-mvtnorm r-cran-covr r-cran-tibble r-cran-testthat r-cran-getopt 125s r-cran-mapproj r-cran-httr r-cran-roxygen2 r-cran-inline r-cran-survival 125s Recommended packages: 125s proj-bin libheif-plugin-aomenc node-jquery poppler-data r-recommended 125s r-base-dev r-doc-html r-cran-curl r-cran-future r-cran-ggplot2 125s r-cran-testthat r-cran-thematic r-cran-spdata r-cran-tinytest r-cran-callr 125s r-cran-covr r-cran-htmlwidgets r-cran-mockery r-cran-processx r-cran-ps 125s r-cran-rprojroot r-cran-rstudioapi r-cran-tibble r-cran-whoami 125s r-cran-data.table r-cran-rcpparmadillo r-cran-rcppeigen r-cran-dplyr 125s r-cran-scales r-cran-microbenchmark r-cran-xml2 r-cran-rsvg r-cran-pillar 125s r-cran-spelling r-cran-vctrs r-cran-pkgload r-cran-rsqlite r-cran-waldo 125s r-cran-fields r-cran-future.apply r-cran-testit r-cran-cairo r-cran-ragg 125s r-cran-httr r-cran-r.rsp r-cran-codetools r-cran-formatr r-cran-gridsvg 125s r-cran-jpeg r-cran-magick r-cran-png r-cran-reticulate r-cran-rgl 125s r-cran-tikzdevice r-cran-webshot r-cran-svglite node-highlight.js 125s r-cran-lintr r-cran-tidyverse r-cran-rcurl r-cran-clue r-cran-plot3d 125s r-cran-runit r-cran-aer r-cran-car r-cran-spdep r-cran-statmod r-cran-urca 125s r-cran-bookdown r-cran-purrr r-cran-cba r-cran-ncdf4 r-cran-igraph 125s r-cran-exactextractr r-cran-gbrd r-cran-usethis r-cran-dygraphs 125s r-cran-rsconnect r-cran-downlit r-cran-bit64 r-cran-blob r-cran-nanoarrow 125s r-cran-lwgeom r-cran-matrix r-cran-pbapply r-cran-spatstat 125s r-cran-spatstat.geom r-cran-spatstat.random r-cran-spatstat.linnet 125s r-cran-spatstat.utils r-cran-tidyr r-cran-tidyselect r-cran-ncmeta r-cran-dt 125s r-cran-deldir r-cran-pcict r-cran-rnetcdf r-cran-cubelyr r-cran-ggforce 125s r-cran-ggthemes r-cran-ncdfgeom r-cran-randomforest r-cran-viridis 125s r-cran-xml r-cran-vdiffr r-cran-readr r-cran-remotes r-cran-renv 125s r-cran-timeseries r-cran-timedate r-cran-tseries r-cran-chron 125s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 125s x11-xserver-utils 125s The following NEW packages will be installed: 125s autopkgtest-satdep fontconfig fontconfig-config fonts-dejavu-core 125s fonts-dejavu-mono fonts-font-awesome fonts-glyphicons-halflings 125s fonts-mathjax gdal-data gdal-plugins javascript-common libaec0 libaom3 125s libarmadillo14 libarpack2t64 libblas3 libblosc1 libcairo2 libcfitsio10t64 125s libdatrie1 libde265-0 libdeflate0 libfontconfig1 libfreexl1 libfyba0t64 125s libgdal35 libgeos-c1t64 libgeos3.12.2 libgeotiff5 libgfortran5 libgif7 125s libgomp1 libgraphite2-3 libharfbuzz0b libhdf4-0-alt libhdf5-103-1t64 125s libhdf5-hl-100t64 libheif-plugin-aomdec libheif-plugin-libde265 libheif1 125s libice6 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-bootstrap4 125s libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 125s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 125s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 125s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 125s libkmlbase1t64 libkmldom1t64 libkmlengine1t64 liblapack3 liblcms2-2 liblerc4 125s libltdl7 liblua5.4-0 libminizip1t64 libmysqlclient21 libnetcdf19t64 libodbc2 125s libodbcinst2 libogdi4.1 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 125s libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libpoppler140 125s libpq5 libproj25 libqhull-r8.0 librttopo1 libsharpyuv0 libsm6 libsnappy1v5 125s libspatialite8t64 libsuperlu6 libsz2 libtcl8.6 libthai-data libthai0 125s libtiff6 libtk8.6 libudunits2-0 libudunits2-data liburiparser1 libwebp7 125s libxcb-render0 libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1 125s libxt6t64 littler mysql-common node-bootstrap-sass node-html5shiv 125s node-normalize.css pandoc pandoc-data proj-data r-base-core r-cran-abind 125s r-cran-base64enc r-cran-bdsmatrix r-cran-bslib r-cran-cachem r-cran-class 125s r-cran-classint r-cran-cli r-cran-collapse r-cran-commonmark r-cran-crayon 125s r-cran-dbi r-cran-digest r-cran-e1071 r-cran-evaluate r-cran-fastmap 125s r-cran-fnn r-cran-fontawesome r-cran-foreign r-cran-formula r-cran-fs 125s r-cran-generics r-cran-glue r-cran-gstat r-cran-highr r-cran-htmltools 125s r-cran-httpuv r-cran-intervals r-cran-isocodes r-cran-jquerylib 125s r-cran-jsonlite r-cran-kernsmooth r-cran-knitr r-cran-later r-cran-lattice 125s r-cran-lifecycle r-cran-littler r-cran-lmtest r-cran-magrittr r-cran-mapdata 125s r-cran-maps r-cran-markdown r-cran-mass r-cran-maxlik r-cran-memoise 125s r-cran-mime r-cran-misctools r-cran-nlme r-cran-pkgkitten r-cran-plm 125s r-cran-promises r-cran-proxy r-cran-r6 r-cran-rappdirs r-cran-raster 125s r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp r-cran-rdpack r-cran-rlang 125s r-cran-rmarkdown r-cran-rpostgresql r-cran-s2 r-cran-sandwich r-cran-sass 125s r-cran-sf r-cran-sftime r-cran-shiny r-cran-sourcetools r-cran-sp 125s r-cran-spacetime r-cran-stars r-cran-terra r-cran-tinytex r-cran-units 125s r-cran-withr r-cran-wk r-cran-xfun r-cran-xtable r-cran-xts r-cran-yaml 125s r-cran-zoo unixodbc-common unzip x11-common xdg-utils zip 125s 0 upgraded, 205 newly installed, 0 to remove and 0 not upgraded. 125s Need to get 206 MB/206 MB of archives. 125s After this operation, 629 MB of additional disk space will be used. 125s Get:1 /tmp/autopkgtest.x1HKE3/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [804 B] 125s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 126s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 126s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB] 126s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB] 126s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB] 126s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 126s Get:8 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 126s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 126s Get:10 http://ftpmaster.internal/ubuntu plucky/universe amd64 gdal-data all 3.9.1+dfsg-1build2 [269 kB] 126s Get:11 http://ftpmaster.internal/ubuntu plucky/universe amd64 gdal-plugins amd64 3.9.1+dfsg-1build2 [25.3 kB] 126s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 11+nmu1 [5936 B] 126s Get:13 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 126s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libaom3 amd64 3.11.0~rc1-1 [2762 kB] 126s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-3build2 [247 kB] 126s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-7ubuntu1 [909 kB] 126s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-3build2 [2668 kB] 126s Get:18 http://ftpmaster.internal/ubuntu plucky/universe amd64 libarpack2t64 amd64 3.9.1-1.1ubuntu1 [107 kB] 126s Get:19 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsuperlu6 amd64 6.0.1+dfsg1-1build3 [182 kB] 126s Get:20 http://ftpmaster.internal/ubuntu plucky/universe amd64 libarmadillo14 amd64 1:14.0.1+dfsg-2 [105 kB] 126s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libsnappy1v5 amd64 1.2.1-1 [30.4 kB] 126s Get:22 http://ftpmaster.internal/ubuntu plucky/universe amd64 libblosc1 amd64 1.21.5+ds-1build1 [36.2 kB] 126s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-2 [427 kB] 126s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 127s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 127s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 127s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 127s Get:28 http://ftpmaster.internal/ubuntu plucky/universe amd64 libcfitsio10t64 amd64 4.4.1-2 [524 kB] 127s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 127s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libde265-0 amd64 1.0.15-1build4 [168 kB] 127s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.22-1 [64.5 kB] 127s Get:32 http://ftpmaster.internal/ubuntu plucky/universe amd64 libfyba0t64 amd64 4.1.1-11build1 [119 kB] 127s Get:33 http://ftpmaster.internal/ubuntu plucky/universe amd64 libminizip1t64 amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [22.9 kB] 127s Get:34 http://ftpmaster.internal/ubuntu plucky/universe amd64 libfreexl1 amd64 2.0.0-1build2 [41.7 kB] 127s Get:35 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeos3.12.2 amd64 3.12.2-1 [849 kB] 127s Get:36 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeos-c1t64 amd64 3.12.2-1 [94.4 kB] 127s Get:37 http://ftpmaster.internal/ubuntu plucky/universe amd64 proj-data all 9.4.1-1 [7892 kB] 127s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 127s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-2ubuntu2 [150 kB] 127s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 127s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-4ubuntu2 [179 kB] 127s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [17.5 kB] 127s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.4.0-0.1 [231 kB] 127s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 127s Get:45 http://ftpmaster.internal/ubuntu plucky/universe amd64 libproj25 amd64 9.4.1-1 [1398 kB] 127s Get:46 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeotiff5 amd64 1.7.3-1 [63.0 kB] 127s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libgif7 amd64 5.2.2-1ubuntu1 [35.2 kB] 127s Get:48 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 127s Get:49 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf4-0-alt amd64 4.3.0-1 [285 kB] 127s Get:50 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-103-1t64 amd64 1.10.10+repack-4ubuntu3 [1280 kB] 127s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif-plugin-aomdec amd64 1.18.1-2 [11.1 kB] 127s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif-plugin-libde265 amd64 1.18.1-2 [8758 B] 127s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif1 amd64 1.18.1-2 [293 kB] 128s Get:54 http://ftpmaster.internal/ubuntu plucky/universe amd64 liburiparser1 amd64 0.9.8+dfsg-1 [35.9 kB] 128s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmlbase1t64 amd64 1.3.0-12build1 [49.9 kB] 128s Get:56 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmldom1t64 amd64 1.3.0-12build1 [156 kB] 128s Get:57 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmlengine1t64 amd64 1.3.0-12build1 [71.4 kB] 128s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 mysql-common all 5.8+1.1.1 [6800 B] 128s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libmysqlclient21 amd64 8.0.40-1 [1250 kB] 128s Get:60 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-4ubuntu3 [56.6 kB] 128s Get:61 http://ftpmaster.internal/ubuntu plucky/universe amd64 libnetcdf19t64 amd64 1:4.9.2-6ubuntu1 [472 kB] 128s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl7 amd64 2.4.7-7build1 [40.3 kB] 128s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 libodbc2 amd64 2.3.12-1ubuntu1 [158 kB] 128s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 unixodbc-common all 2.3.12-1ubuntu1 [8796 B] 128s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libodbcinst2 amd64 2.3.12-1ubuntu1 [30.7 kB] 128s Get:66 http://ftpmaster.internal/ubuntu plucky/universe amd64 libogdi4.1 amd64 4.1.1+ds-5 [219 kB] 128s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libopenjp2-7 amd64 2.5.0-2ubuntu1 [184 kB] 128s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 liblcms2-2 amd64 2.14-2build1 [161 kB] 128s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 libpoppler140 amd64 24.08.0-1 [1168 kB] 128s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 libpq5 amd64 17.0-1 [249 kB] 128s Get:71 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqhull-r8.0 amd64 2020.2-6build1 [193 kB] 128s Get:72 http://ftpmaster.internal/ubuntu plucky/universe amd64 librttopo1 amd64 1.1.0-3build2 [191 kB] 128s Get:73 http://ftpmaster.internal/ubuntu plucky/universe amd64 libspatialite8t64 amd64 5.1.0-3build1 [1919 kB] 128s Get:74 http://ftpmaster.internal/ubuntu plucky/universe amd64 libxerces-c3.2t64 amd64 3.2.4+debian-1.3 [917 kB] 128s Get:75 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgdal35 amd64 3.9.1+dfsg-1build2 [9303 kB] 129s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-7ubuntu1 [148 kB] 129s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 129s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 9.0.0-1 [487 kB] 129s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 129s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 129s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 129s Get:82 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 129s Get:83 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 129s Get:84 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 129s Get:85 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 129s Get:86 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 129s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 129s Get:88 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 129s Get:89 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 129s Get:90 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 129s Get:91 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 129s Get:92 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 129s Get:93 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 129s Get:94 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 129s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 liblua5.4-0 amd64 5.4.6-3build2 [166 kB] 129s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 129s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 129s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.54.0+ds-2 [235 kB] 129s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.54.0+ds-2 [49.1 kB] 129s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.54.0+ds-2 [28.8 kB] 129s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper1 amd64 1.1.29build1 [13.4 kB] 129s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 1.1.29build1 [8650 B] 129s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 129s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.14+dfsg-1build1 [988 kB] 130s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 130s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 130s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.14-1build1 [779 kB] 130s Get:108 http://ftpmaster.internal/ubuntu plucky/universe amd64 libudunits2-data all 2.2.28-7build1 [19.4 kB] 130s Get:109 http://ftpmaster.internal/ubuntu plucky/universe amd64 libudunits2-0 amd64 2.2.28-7build1 [54.1 kB] 130s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 130s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14 [174 kB] 130s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 130s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 130s Get:114 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.2-1 [28.9 MB] 131s Get:115 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-1 [96.0 kB] 131s Get:116 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-1 [2486 B] 131s Get:117 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 131s Get:118 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 131s Get:119 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 131s Get:120 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc-data all 3.1.11.1-3 [78.7 kB] 131s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc amd64 3.1.11.1+ds-2 [27.2 MB] 133s Get:122 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-abind all 1.4-8-1 [66.9 kB] 133s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 133s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bdsmatrix amd64 1.3-7-1 [299 kB] 133s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.4-1 [1708 kB] 133s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 133s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 133s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB] 133s Get:129 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 133s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 133s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.8.8+dfsg-1 [441 kB] 133s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.2-1 [1380 kB] 133s Get:133 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.7.0-1 [154 kB] 133s Get:134 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 133s Get:135 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 133s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 133s Get:137 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.4+dfsg-1 [245 kB] 133s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB] 133s Get:139 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 133s Get:140 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 133s Get:141 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.7.0+dfsg-1 [4255 kB] 133s Get:142 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mass amd64 7.3-61-1 [1109 kB] 133s Get:143 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-class amd64 7.3-22-2build1 [88.2 kB] 133s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB] 133s Get:145 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-e1071 amd64 1.7-16-1 [565 kB] 133s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernsmooth amd64 2.23-24-1 [92.9 kB] 133s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-classint amd64 0.4-10+dfsg-1 [106 kB] 133s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 133s Get:149 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.13-1 [1990 kB] 134s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-collapse amd64 2.0.16-1 [3351 kB] 134s Get:151 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.1-1 [131 kB] 134s Get:152 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.2-1 [164 kB] 134s Get:153 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dbi all 1.2.3-1 [853 kB] 134s Get:154 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 0.24.0-1 [93.5 kB] 134s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fnn amd64 1.1.4.1-1 [126 kB] 134s Get:156 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 134s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-foreign amd64 0.8.87-1 [245 kB] 134s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-formula all 1.2-5-1 [158 kB] 134s Get:159 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB] 134s Get:160 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 134s Get:161 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sp amd64 1:2.1-4+dfsg-1 [1472 kB] 134s Get:162 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-zoo amd64 1.8-12-2 [984 kB] 134s Get:163 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 134s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-wk amd64 0.9.4-1 [1791 kB] 134s Get:165 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-s2 amd64 1.1.6-1build2 [1981 kB] 134s Get:166 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-units amd64 0.8-5+dfsg-1 [275 kB] 134s Get:167 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sf amd64 1.0-16+dfsg-1build1 [3064 kB] 135s Get:168 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sftime all 0.2-0-6 [168 kB] 135s Get:169 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xts amd64 0.14.0-1 [760 kB] 135s Get:170 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-intervals amd64 0.15.4-1 [756 kB] 135s Get:171 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-spacetime all 1.3-2-1 [2776 kB] 135s Get:172 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stars all 0.6-6-1 [4105 kB] 135s Get:173 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gstat amd64 2.1-2-1 [2335 kB] 135s Get:174 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xfun amd64 0.49+dfsg-1 [545 kB] 135s Get:175 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 135s Get:176 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.3.2+dfsg-1 [123 kB] 135s Get:177 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.0+dfsg-1 [287 kB] 136s Get:178 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 136s Get:179 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-isocodes all 2024.02.12-1 [312 kB] 136s Get:180 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.8-2 [108 kB] 136s Get:181 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 136s Get:182 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-knitr all 1.47+dfsg-1 [911 kB] 136s Get:183 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lmtest amd64 0.9.40-1 [396 kB] 136s Get:184 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-maps amd64 3.4.2-1 [2359 kB] 136s Get:185 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mapdata amd64 2.3.1-1 [23.5 MB] 139s Get:186 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-markdown all 1.12+dfsg-2 [179 kB] 139s Get:187 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-misctools all 0.6-28-1 [99.9 kB] 139s Get:188 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sandwich all 3.1-0-1 [1484 kB] 139s Get:189 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-maxlik all 1.5-2.1-1 [1083 kB] 139s Get:190 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nlme amd64 3.1.166-1 [2314 kB] 139s Get:191 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rbibutils amd64 2.3-1 [1023 kB] 139s Get:192 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rdpack all 2.6.1-1 [755 kB] 140s Get:193 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plm all 2.6-4-1 [2161 kB] 140s Get:194 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-terra amd64 1.7-78-1 [3751 kB] 140s Get:195 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-raster amd64 3.6-30-1 [3145 kB] 140s Get:196 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 140s Get:197 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tinytex all 0.53-1 [145 kB] 140s Get:198 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-modernizr all 3.13.0-0.1 [101 kB] 140s Get:199 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 140s Get:200 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 140s Get:201 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.0+dfsg-1 [228 kB] 140s Get:202 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 140s Get:203 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.8.1.1+dfsg-1 [2873 kB] 141s Get:204 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-rmarkdown all 2.28+dfsg-1 [1501 kB] 141s Get:205 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rpostgresql amd64 0.7-7+dfsg-1 [365 kB] 142s Preconfiguring packages ... 142s Fetched 206 MB in 16s (12.7 MB/s) 142s Selecting previously unselected package fonts-dejavu-mono. 142s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75551 files and directories currently installed.) 142s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8_all.deb ... 142s Unpacking fonts-dejavu-mono (2.37-8) ... 142s Selecting previously unselected package fonts-dejavu-core. 142s Preparing to unpack .../001-fonts-dejavu-core_2.37-8_all.deb ... 142s Unpacking fonts-dejavu-core (2.37-8) ... 142s Selecting previously unselected package fontconfig-config. 142s Preparing to unpack .../002-fontconfig-config_2.15.0-1.1ubuntu2_amd64.deb ... 142s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 142s Selecting previously unselected package libfontconfig1:amd64. 142s Preparing to unpack .../003-libfontconfig1_2.15.0-1.1ubuntu2_amd64.deb ... 142s Unpacking libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ... 142s Selecting previously unselected package fontconfig. 142s Preparing to unpack .../004-fontconfig_2.15.0-1.1ubuntu2_amd64.deb ... 142s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 142s Selecting previously unselected package fonts-font-awesome. 142s Preparing to unpack .../005-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 142s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 142s Selecting previously unselected package fonts-glyphicons-halflings. 142s Preparing to unpack .../006-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 142s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 142s Selecting previously unselected package fonts-mathjax. 142s Preparing to unpack .../007-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 142s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 142s Selecting previously unselected package gdal-data. 142s Preparing to unpack .../008-gdal-data_3.9.1+dfsg-1build2_all.deb ... 142s Unpacking gdal-data (3.9.1+dfsg-1build2) ... 142s Selecting previously unselected package gdal-plugins:amd64. 142s Preparing to unpack .../009-gdal-plugins_3.9.1+dfsg-1build2_amd64.deb ... 142s Unpacking gdal-plugins:amd64 (3.9.1+dfsg-1build2) ... 142s Selecting previously unselected package javascript-common. 142s Preparing to unpack .../010-javascript-common_11+nmu1_all.deb ... 142s Unpacking javascript-common (11+nmu1) ... 142s Selecting previously unselected package libaec0:amd64. 142s Preparing to unpack .../011-libaec0_1.1.3-1_amd64.deb ... 142s Unpacking libaec0:amd64 (1.1.3-1) ... 142s Selecting previously unselected package libaom3:amd64. 142s Preparing to unpack .../012-libaom3_3.11.0~rc1-1_amd64.deb ... 142s Unpacking libaom3:amd64 (3.11.0~rc1-1) ... 143s Selecting previously unselected package libblas3:amd64. 143s Preparing to unpack .../013-libblas3_3.12.0-3build2_amd64.deb ... 143s Unpacking libblas3:amd64 (3.12.0-3build2) ... 143s Selecting previously unselected package libgfortran5:amd64. 143s Preparing to unpack .../014-libgfortran5_14.2.0-7ubuntu1_amd64.deb ... 143s Unpacking libgfortran5:amd64 (14.2.0-7ubuntu1) ... 143s Selecting previously unselected package liblapack3:amd64. 143s Preparing to unpack .../015-liblapack3_3.12.0-3build2_amd64.deb ... 143s Unpacking liblapack3:amd64 (3.12.0-3build2) ... 143s Selecting previously unselected package libarpack2t64:amd64. 143s Preparing to unpack .../016-libarpack2t64_3.9.1-1.1ubuntu1_amd64.deb ... 143s Unpacking libarpack2t64:amd64 (3.9.1-1.1ubuntu1) ... 143s Selecting previously unselected package libsuperlu6:amd64. 143s Preparing to unpack .../017-libsuperlu6_6.0.1+dfsg1-1build3_amd64.deb ... 143s Unpacking libsuperlu6:amd64 (6.0.1+dfsg1-1build3) ... 143s Selecting previously unselected package libarmadillo14. 143s Preparing to unpack .../018-libarmadillo14_1%3a14.0.1+dfsg-2_amd64.deb ... 143s Unpacking libarmadillo14 (1:14.0.1+dfsg-2) ... 143s Selecting previously unselected package libsnappy1v5:amd64. 143s Preparing to unpack .../019-libsnappy1v5_1.2.1-1_amd64.deb ... 143s Unpacking libsnappy1v5:amd64 (1.2.1-1) ... 143s Selecting previously unselected package libblosc1:amd64. 143s Preparing to unpack .../020-libblosc1_1.21.5+ds-1build1_amd64.deb ... 143s Unpacking libblosc1:amd64 (1.21.5+ds-1build1) ... 143s Selecting previously unselected package libpixman-1-0:amd64. 143s Preparing to unpack .../021-libpixman-1-0_0.44.0-2_amd64.deb ... 143s Unpacking libpixman-1-0:amd64 (0.44.0-2) ... 143s Selecting previously unselected package libxcb-render0:amd64. 143s Preparing to unpack .../022-libxcb-render0_1.17.0-2_amd64.deb ... 143s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 143s Selecting previously unselected package libxcb-shm0:amd64. 143s Preparing to unpack .../023-libxcb-shm0_1.17.0-2_amd64.deb ... 143s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 143s Selecting previously unselected package libxrender1:amd64. 143s Preparing to unpack .../024-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 143s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 143s Selecting previously unselected package libcairo2:amd64. 143s Preparing to unpack .../025-libcairo2_1.18.2-2_amd64.deb ... 143s Unpacking libcairo2:amd64 (1.18.2-2) ... 143s Selecting previously unselected package libcfitsio10t64:amd64. 143s Preparing to unpack .../026-libcfitsio10t64_4.4.1-2_amd64.deb ... 143s Unpacking libcfitsio10t64:amd64 (4.4.1-2) ... 143s Selecting previously unselected package libdatrie1:amd64. 143s Preparing to unpack .../027-libdatrie1_0.2.13-3build1_amd64.deb ... 143s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 143s Selecting previously unselected package libde265-0:amd64. 143s Preparing to unpack .../028-libde265-0_1.0.15-1build4_amd64.deb ... 143s Unpacking libde265-0:amd64 (1.0.15-1build4) ... 143s Selecting previously unselected package libdeflate0:amd64. 143s Preparing to unpack .../029-libdeflate0_1.22-1_amd64.deb ... 143s Unpacking libdeflate0:amd64 (1.22-1) ... 143s Selecting previously unselected package libfyba0t64:amd64. 143s Preparing to unpack .../030-libfyba0t64_4.1.1-11build1_amd64.deb ... 143s Unpacking libfyba0t64:amd64 (4.1.1-11build1) ... 143s Selecting previously unselected package libminizip1t64:amd64. 143s Preparing to unpack .../031-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ... 143s Unpacking libminizip1t64:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 143s Selecting previously unselected package libfreexl1:amd64. 143s Preparing to unpack .../032-libfreexl1_2.0.0-1build2_amd64.deb ... 143s Unpacking libfreexl1:amd64 (2.0.0-1build2) ... 143s Selecting previously unselected package libgeos3.12.2:amd64. 143s Preparing to unpack .../033-libgeos3.12.2_3.12.2-1_amd64.deb ... 143s Unpacking libgeos3.12.2:amd64 (3.12.2-1) ... 143s Selecting previously unselected package libgeos-c1t64:amd64. 143s Preparing to unpack .../034-libgeos-c1t64_3.12.2-1_amd64.deb ... 143s Unpacking libgeos-c1t64:amd64 (3.12.2-1) ... 143s Selecting previously unselected package proj-data. 143s Preparing to unpack .../035-proj-data_9.4.1-1_all.deb ... 143s Unpacking proj-data (9.4.1-1) ... 143s Selecting previously unselected package libjbig0:amd64. 143s Preparing to unpack .../036-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 143s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 143s Selecting previously unselected package libjpeg-turbo8:amd64. 143s Preparing to unpack .../037-libjpeg-turbo8_2.1.5-2ubuntu2_amd64.deb ... 143s Unpacking libjpeg-turbo8:amd64 (2.1.5-2ubuntu2) ... 143s Selecting previously unselected package libjpeg8:amd64. 143s Preparing to unpack .../038-libjpeg8_8c-2ubuntu11_amd64.deb ... 143s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 143s Selecting previously unselected package liblerc4:amd64. 143s Preparing to unpack .../039-liblerc4_4.0.0+ds-4ubuntu2_amd64.deb ... 143s Unpacking liblerc4:amd64 (4.0.0+ds-4ubuntu2) ... 143s Selecting previously unselected package libsharpyuv0:amd64. 143s Preparing to unpack .../040-libsharpyuv0_1.4.0-0.1_amd64.deb ... 143s Unpacking libsharpyuv0:amd64 (1.4.0-0.1) ... 143s Selecting previously unselected package libwebp7:amd64. 143s Preparing to unpack .../041-libwebp7_1.4.0-0.1_amd64.deb ... 143s Unpacking libwebp7:amd64 (1.4.0-0.1) ... 143s Selecting previously unselected package libtiff6:amd64. 143s Preparing to unpack .../042-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ... 143s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 143s Selecting previously unselected package libproj25:amd64. 143s Preparing to unpack .../043-libproj25_9.4.1-1_amd64.deb ... 143s Unpacking libproj25:amd64 (9.4.1-1) ... 143s Selecting previously unselected package libgeotiff5:amd64. 143s Preparing to unpack .../044-libgeotiff5_1.7.3-1_amd64.deb ... 143s Unpacking libgeotiff5:amd64 (1.7.3-1) ... 143s Selecting previously unselected package libgif7:amd64. 143s Preparing to unpack .../045-libgif7_5.2.2-1ubuntu1_amd64.deb ... 143s Unpacking libgif7:amd64 (5.2.2-1ubuntu1) ... 143s Selecting previously unselected package libsz2:amd64. 143s Preparing to unpack .../046-libsz2_1.1.3-1_amd64.deb ... 143s Unpacking libsz2:amd64 (1.1.3-1) ... 143s Selecting previously unselected package libhdf4-0-alt:amd64. 143s Preparing to unpack .../047-libhdf4-0-alt_4.3.0-1_amd64.deb ... 143s Unpacking libhdf4-0-alt:amd64 (4.3.0-1) ... 143s Selecting previously unselected package libhdf5-103-1t64:amd64. 143s Preparing to unpack .../048-libhdf5-103-1t64_1.10.10+repack-4ubuntu3_amd64.deb ... 143s Unpacking libhdf5-103-1t64:amd64 (1.10.10+repack-4ubuntu3) ... 143s Selecting previously unselected package libheif-plugin-aomdec:amd64. 143s Preparing to unpack .../049-libheif-plugin-aomdec_1.18.1-2_amd64.deb ... 143s Unpacking libheif-plugin-aomdec:amd64 (1.18.1-2) ... 143s Selecting previously unselected package libheif-plugin-libde265:amd64. 144s Preparing to unpack .../050-libheif-plugin-libde265_1.18.1-2_amd64.deb ... 144s Unpacking libheif-plugin-libde265:amd64 (1.18.1-2) ... 144s Selecting previously unselected package libheif1:amd64. 144s Preparing to unpack .../051-libheif1_1.18.1-2_amd64.deb ... 144s Unpacking libheif1:amd64 (1.18.1-2) ... 144s Selecting previously unselected package liburiparser1:amd64. 144s Preparing to unpack .../052-liburiparser1_0.9.8+dfsg-1_amd64.deb ... 144s Unpacking liburiparser1:amd64 (0.9.8+dfsg-1) ... 144s Selecting previously unselected package libkmlbase1t64:amd64. 144s Preparing to unpack .../053-libkmlbase1t64_1.3.0-12build1_amd64.deb ... 144s Unpacking libkmlbase1t64:amd64 (1.3.0-12build1) ... 144s Selecting previously unselected package libkmldom1t64:amd64. 144s Preparing to unpack .../054-libkmldom1t64_1.3.0-12build1_amd64.deb ... 144s Unpacking libkmldom1t64:amd64 (1.3.0-12build1) ... 144s Selecting previously unselected package libkmlengine1t64:amd64. 144s Preparing to unpack .../055-libkmlengine1t64_1.3.0-12build1_amd64.deb ... 144s Unpacking libkmlengine1t64:amd64 (1.3.0-12build1) ... 144s Selecting previously unselected package mysql-common. 144s Preparing to unpack .../056-mysql-common_5.8+1.1.1_all.deb ... 144s Unpacking mysql-common (5.8+1.1.1) ... 144s Selecting previously unselected package libmysqlclient21:amd64. 144s Preparing to unpack .../057-libmysqlclient21_8.0.40-1_amd64.deb ... 144s Unpacking libmysqlclient21:amd64 (8.0.40-1) ... 144s Selecting previously unselected package libhdf5-hl-100t64:amd64. 144s Preparing to unpack .../058-libhdf5-hl-100t64_1.10.10+repack-4ubuntu3_amd64.deb ... 144s Unpacking libhdf5-hl-100t64:amd64 (1.10.10+repack-4ubuntu3) ... 144s Selecting previously unselected package libnetcdf19t64:amd64. 144s Preparing to unpack .../059-libnetcdf19t64_1%3a4.9.2-6ubuntu1_amd64.deb ... 144s Unpacking libnetcdf19t64:amd64 (1:4.9.2-6ubuntu1) ... 144s Selecting previously unselected package libltdl7:amd64. 144s Preparing to unpack .../060-libltdl7_2.4.7-7build1_amd64.deb ... 144s Unpacking libltdl7:amd64 (2.4.7-7build1) ... 144s Selecting previously unselected package libodbc2:amd64. 144s Preparing to unpack .../061-libodbc2_2.3.12-1ubuntu1_amd64.deb ... 144s Unpacking libodbc2:amd64 (2.3.12-1ubuntu1) ... 144s Selecting previously unselected package unixodbc-common. 144s Preparing to unpack .../062-unixodbc-common_2.3.12-1ubuntu1_all.deb ... 144s Unpacking unixodbc-common (2.3.12-1ubuntu1) ... 144s Selecting previously unselected package libodbcinst2:amd64. 144s Preparing to unpack .../063-libodbcinst2_2.3.12-1ubuntu1_amd64.deb ... 144s Unpacking libodbcinst2:amd64 (2.3.12-1ubuntu1) ... 144s Selecting previously unselected package libogdi4.1:amd64. 144s Preparing to unpack .../064-libogdi4.1_4.1.1+ds-5_amd64.deb ... 144s Unpacking libogdi4.1:amd64 (4.1.1+ds-5) ... 144s Selecting previously unselected package libopenjp2-7:amd64. 144s Preparing to unpack .../065-libopenjp2-7_2.5.0-2ubuntu1_amd64.deb ... 144s Unpacking libopenjp2-7:amd64 (2.5.0-2ubuntu1) ... 144s Selecting previously unselected package liblcms2-2:amd64. 144s Preparing to unpack .../066-liblcms2-2_2.14-2build1_amd64.deb ... 144s Unpacking liblcms2-2:amd64 (2.14-2build1) ... 144s Selecting previously unselected package libpoppler140:amd64. 144s Preparing to unpack .../067-libpoppler140_24.08.0-1_amd64.deb ... 144s Unpacking libpoppler140:amd64 (24.08.0-1) ... 144s Selecting previously unselected package libpq5:amd64. 144s Preparing to unpack .../068-libpq5_17.0-1_amd64.deb ... 144s Unpacking libpq5:amd64 (17.0-1) ... 144s Selecting previously unselected package libqhull-r8.0:amd64. 144s Preparing to unpack .../069-libqhull-r8.0_2020.2-6build1_amd64.deb ... 144s Unpacking libqhull-r8.0:amd64 (2020.2-6build1) ... 144s Selecting previously unselected package librttopo1:amd64. 144s Preparing to unpack .../070-librttopo1_1.1.0-3build2_amd64.deb ... 144s Unpacking librttopo1:amd64 (1.1.0-3build2) ... 144s Selecting previously unselected package libspatialite8t64:amd64. 144s Preparing to unpack .../071-libspatialite8t64_5.1.0-3build1_amd64.deb ... 144s Unpacking libspatialite8t64:amd64 (5.1.0-3build1) ... 144s Selecting previously unselected package libxerces-c3.2t64:amd64. 144s Preparing to unpack .../072-libxerces-c3.2t64_3.2.4+debian-1.3_amd64.deb ... 144s Unpacking libxerces-c3.2t64:amd64 (3.2.4+debian-1.3) ... 144s Selecting previously unselected package libgdal35:amd64. 144s Preparing to unpack .../073-libgdal35_3.9.1+dfsg-1build2_amd64.deb ... 144s Unpacking libgdal35:amd64 (3.9.1+dfsg-1build2) ... 144s Selecting previously unselected package libgomp1:amd64. 144s Preparing to unpack .../074-libgomp1_14.2.0-7ubuntu1_amd64.deb ... 144s Unpacking libgomp1:amd64 (14.2.0-7ubuntu1) ... 144s Selecting previously unselected package libgraphite2-3:amd64. 144s Preparing to unpack .../075-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 144s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 144s Selecting previously unselected package libharfbuzz0b:amd64. 144s Preparing to unpack .../076-libharfbuzz0b_9.0.0-1_amd64.deb ... 144s Unpacking libharfbuzz0b:amd64 (9.0.0-1) ... 144s Selecting previously unselected package x11-common. 144s Preparing to unpack .../077-x11-common_1%3a7.7+23ubuntu3_all.deb ... 144s Unpacking x11-common (1:7.7+23ubuntu3) ... 144s Selecting previously unselected package libice6:amd64. 144s Preparing to unpack .../078-libice6_2%3a1.1.1-1_amd64.deb ... 144s Unpacking libice6:amd64 (2:1.1.1-1) ... 144s Selecting previously unselected package libjs-bootstrap. 144s Preparing to unpack .../079-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 144s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 144s Selecting previously unselected package libjs-popper.js. 144s Preparing to unpack .../080-libjs-popper.js_1.16.1+ds-6_all.deb ... 144s Unpacking libjs-popper.js (1.16.1+ds-6) ... 145s Selecting previously unselected package libjs-bootstrap4. 145s Preparing to unpack .../081-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 145s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 145s Selecting previously unselected package libjs-d3. 145s Preparing to unpack .../082-libjs-d3_3.5.17-4_all.deb ... 145s Unpacking libjs-d3 (3.5.17-4) ... 145s Selecting previously unselected package libjs-es5-shim. 145s Preparing to unpack .../083-libjs-es5-shim_4.6.7-2_all.deb ... 145s Unpacking libjs-es5-shim (4.6.7-2) ... 145s Selecting previously unselected package libjs-highlight.js. 145s Preparing to unpack .../084-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 145s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 145s Selecting previously unselected package libjs-jquery. 145s Preparing to unpack .../085-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 145s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 145s Selecting previously unselected package libjs-jquery-datatables. 145s Preparing to unpack .../086-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 145s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 145s Selecting previously unselected package libjs-sifter.js. 145s Preparing to unpack .../087-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 145s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 145s Selecting previously unselected package libjs-microplugin.js. 145s Preparing to unpack .../088-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 145s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 145s Selecting previously unselected package libjs-jquery-selectize.js. 145s Preparing to unpack .../089-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 145s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 145s Selecting previously unselected package libjs-jquery-ui. 145s Preparing to unpack .../090-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 145s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 145s Selecting previously unselected package libjs-json. 145s Preparing to unpack .../091-libjs-json_0~20221030+~1.0.8-1_all.deb ... 145s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 145s Selecting previously unselected package libjs-prettify. 145s Preparing to unpack .../092-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 145s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 145s Selecting previously unselected package liblua5.4-0:amd64. 145s Preparing to unpack .../093-liblua5.4-0_5.4.6-3build2_amd64.deb ... 145s Unpacking liblua5.4-0:amd64 (5.4.6-3build2) ... 145s Selecting previously unselected package libthai-data. 145s Preparing to unpack .../094-libthai-data_0.1.29-2build1_all.deb ... 145s Unpacking libthai-data (0.1.29-2build1) ... 145s Selecting previously unselected package libthai0:amd64. 145s Preparing to unpack .../095-libthai0_0.1.29-2build1_amd64.deb ... 145s Unpacking libthai0:amd64 (0.1.29-2build1) ... 145s Selecting previously unselected package libpango-1.0-0:amd64. 145s Preparing to unpack .../096-libpango-1.0-0_1.54.0+ds-2_amd64.deb ... 145s Unpacking libpango-1.0-0:amd64 (1.54.0+ds-2) ... 145s Selecting previously unselected package libpangoft2-1.0-0:amd64. 145s Preparing to unpack .../097-libpangoft2-1.0-0_1.54.0+ds-2_amd64.deb ... 145s Unpacking libpangoft2-1.0-0:amd64 (1.54.0+ds-2) ... 145s Selecting previously unselected package libpangocairo-1.0-0:amd64. 145s Preparing to unpack .../098-libpangocairo-1.0-0_1.54.0+ds-2_amd64.deb ... 145s Unpacking libpangocairo-1.0-0:amd64 (1.54.0+ds-2) ... 145s Selecting previously unselected package libpaper1:amd64. 145s Preparing to unpack .../099-libpaper1_1.1.29build1_amd64.deb ... 145s Unpacking libpaper1:amd64 (1.1.29build1) ... 145s Selecting previously unselected package libpaper-utils. 145s Preparing to unpack .../100-libpaper-utils_1.1.29build1_amd64.deb ... 145s Unpacking libpaper-utils (1.1.29build1) ... 145s Selecting previously unselected package libsm6:amd64. 145s Preparing to unpack .../101-libsm6_2%3a1.2.4-1_amd64.deb ... 145s Unpacking libsm6:amd64 (2:1.2.4-1) ... 145s Selecting previously unselected package libtcl8.6:amd64. 145s Preparing to unpack .../102-libtcl8.6_8.6.14+dfsg-1build1_amd64.deb ... 145s Unpacking libtcl8.6:amd64 (8.6.14+dfsg-1build1) ... 145s Selecting previously unselected package libxft2:amd64. 145s Preparing to unpack .../103-libxft2_2.3.6-1build1_amd64.deb ... 145s Unpacking libxft2:amd64 (2.3.6-1build1) ... 145s Selecting previously unselected package libxss1:amd64. 145s Preparing to unpack .../104-libxss1_1%3a1.2.3-1build3_amd64.deb ... 145s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 145s Selecting previously unselected package libtk8.6:amd64. 145s Preparing to unpack .../105-libtk8.6_8.6.14-1build1_amd64.deb ... 145s Unpacking libtk8.6:amd64 (8.6.14-1build1) ... 145s Selecting previously unselected package libudunits2-data. 145s Preparing to unpack .../106-libudunits2-data_2.2.28-7build1_all.deb ... 145s Unpacking libudunits2-data (2.2.28-7build1) ... 145s Selecting previously unselected package libudunits2-0. 145s Preparing to unpack .../107-libudunits2-0_2.2.28-7build1_amd64.deb ... 145s Unpacking libudunits2-0 (2.2.28-7build1) ... 145s Selecting previously unselected package libxt6t64:amd64. 145s Preparing to unpack .../108-libxt6t64_1%3a1.2.1-1.2build1_amd64.deb ... 145s Unpacking libxt6t64:amd64 (1:1.2.1-1.2build1) ... 145s Selecting previously unselected package zip. 145s Preparing to unpack .../109-zip_3.0-14_amd64.deb ... 145s Unpacking zip (3.0-14) ... 145s Selecting previously unselected package unzip. 145s Preparing to unpack .../110-unzip_6.0-28ubuntu6_amd64.deb ... 145s Unpacking unzip (6.0-28ubuntu6) ... 145s Selecting previously unselected package xdg-utils. 145s Preparing to unpack .../111-xdg-utils_1.2.1-0ubuntu1_all.deb ... 145s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 145s Selecting previously unselected package r-base-core. 145s Preparing to unpack .../112-r-base-core_4.4.2-1_amd64.deb ... 145s Unpacking r-base-core (4.4.2-1) ... 146s Selecting previously unselected package r-cran-littler. 146s Preparing to unpack .../113-r-cran-littler_0.3.20-1_amd64.deb ... 146s Unpacking r-cran-littler (0.3.20-1) ... 146s Selecting previously unselected package littler. 146s Preparing to unpack .../114-littler_0.3.20-1_all.deb ... 146s Unpacking littler (0.3.20-1) ... 146s Selecting previously unselected package node-bootstrap-sass. 146s Preparing to unpack .../115-node-bootstrap-sass_3.4.3-2_all.deb ... 146s Unpacking node-bootstrap-sass (3.4.3-2) ... 146s Selecting previously unselected package node-html5shiv. 146s Preparing to unpack .../116-node-html5shiv_3.7.3+dfsg-5_all.deb ... 146s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 146s Selecting previously unselected package node-normalize.css. 146s Preparing to unpack .../117-node-normalize.css_8.0.1-5_all.deb ... 146s Unpacking node-normalize.css (8.0.1-5) ... 146s Selecting previously unselected package pandoc-data. 146s Preparing to unpack .../118-pandoc-data_3.1.11.1-3_all.deb ... 146s Unpacking pandoc-data (3.1.11.1-3) ... 146s Selecting previously unselected package pandoc. 146s Preparing to unpack .../119-pandoc_3.1.11.1+ds-2_amd64.deb ... 146s Unpacking pandoc (3.1.11.1+ds-2) ... 146s Selecting previously unselected package r-cran-abind. 146s Preparing to unpack .../120-r-cran-abind_1.4-8-1_all.deb ... 146s Unpacking r-cran-abind (1.4-8-1) ... 147s Selecting previously unselected package r-cran-base64enc. 147s Preparing to unpack .../121-r-cran-base64enc_0.1-3-3_amd64.deb ... 147s Unpacking r-cran-base64enc (0.1-3-3) ... 147s Selecting previously unselected package r-cran-bdsmatrix. 147s Preparing to unpack .../122-r-cran-bdsmatrix_1.3-7-1_amd64.deb ... 147s Unpacking r-cran-bdsmatrix (1.3-7-1) ... 147s Selecting previously unselected package r-cran-rlang. 147s Preparing to unpack .../123-r-cran-rlang_1.1.4-1_amd64.deb ... 147s Unpacking r-cran-rlang (1.1.4-1) ... 147s Selecting previously unselected package r-cran-fastmap. 147s Preparing to unpack .../124-r-cran-fastmap_1.2.0-1_amd64.deb ... 147s Unpacking r-cran-fastmap (1.2.0-1) ... 147s Selecting previously unselected package r-cran-cachem. 147s Preparing to unpack .../125-r-cran-cachem_1.1.0-1_amd64.deb ... 147s Unpacking r-cran-cachem (1.1.0-1) ... 147s Selecting previously unselected package r-cran-digest. 147s Preparing to unpack .../126-r-cran-digest_0.6.37-1_amd64.deb ... 147s Unpacking r-cran-digest (0.6.37-1) ... 147s Selecting previously unselected package r-cran-htmltools. 147s Preparing to unpack .../127-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 147s Unpacking r-cran-htmltools (0.5.8.1-1) ... 147s Selecting previously unselected package r-cran-jquerylib. 147s Preparing to unpack .../128-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 147s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 147s Selecting previously unselected package r-cran-jsonlite. 147s Preparing to unpack .../129-r-cran-jsonlite_1.8.8+dfsg-1_amd64.deb ... 147s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 147s Selecting previously unselected package r-cran-cli. 147s Preparing to unpack .../130-r-cran-cli_3.6.2-1_amd64.deb ... 147s Unpacking r-cran-cli (3.6.2-1) ... 147s Selecting previously unselected package r-cran-glue. 147s Preparing to unpack .../131-r-cran-glue_1.7.0-1_amd64.deb ... 147s Unpacking r-cran-glue (1.7.0-1) ... 147s Selecting previously unselected package r-cran-lifecycle. 147s Preparing to unpack .../132-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 147s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 147s Selecting previously unselected package r-cran-memoise. 147s Preparing to unpack .../133-r-cran-memoise_2.0.1-1_all.deb ... 147s Unpacking r-cran-memoise (2.0.1-1) ... 147s Selecting previously unselected package r-cran-mime. 147s Preparing to unpack .../134-r-cran-mime_0.12-2_amd64.deb ... 147s Unpacking r-cran-mime (0.12-2) ... 147s Selecting previously unselected package r-cran-fs. 147s Preparing to unpack .../135-r-cran-fs_1.6.4+dfsg-1_amd64.deb ... 147s Unpacking r-cran-fs (1.6.4+dfsg-1) ... 147s Selecting previously unselected package r-cran-r6. 147s Preparing to unpack .../136-r-cran-r6_2.5.1-1_all.deb ... 147s Unpacking r-cran-r6 (2.5.1-1) ... 147s Selecting previously unselected package r-cran-rappdirs. 147s Preparing to unpack .../137-r-cran-rappdirs_0.3.3-1_amd64.deb ... 147s Unpacking r-cran-rappdirs (0.3.3-1) ... 147s Selecting previously unselected package r-cran-sass. 147s Preparing to unpack .../138-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 147s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 147s Selecting previously unselected package r-cran-bslib. 147s Preparing to unpack .../139-r-cran-bslib_0.7.0+dfsg-1_all.deb ... 147s Unpacking r-cran-bslib (0.7.0+dfsg-1) ... 147s Selecting previously unselected package r-cran-mass. 147s Preparing to unpack .../140-r-cran-mass_7.3-61-1_amd64.deb ... 147s Unpacking r-cran-mass (7.3-61-1) ... 147s Selecting previously unselected package r-cran-class. 147s Preparing to unpack .../141-r-cran-class_7.3-22-2build1_amd64.deb ... 147s Unpacking r-cran-class (7.3-22-2build1) ... 147s Selecting previously unselected package r-cran-proxy. 147s Preparing to unpack .../142-r-cran-proxy_0.4-27-1_amd64.deb ... 147s Unpacking r-cran-proxy (0.4-27-1) ... 147s Selecting previously unselected package r-cran-e1071. 147s Preparing to unpack .../143-r-cran-e1071_1.7-16-1_amd64.deb ... 147s Unpacking r-cran-e1071 (1.7-16-1) ... 147s Selecting previously unselected package r-cran-kernsmooth. 147s Preparing to unpack .../144-r-cran-kernsmooth_2.23-24-1_amd64.deb ... 147s Unpacking r-cran-kernsmooth (2.23-24-1) ... 147s Selecting previously unselected package r-cran-classint. 147s Preparing to unpack .../145-r-cran-classint_0.4-10+dfsg-1_amd64.deb ... 147s Unpacking r-cran-classint (0.4-10+dfsg-1) ... 147s Selecting previously unselected package r-cran-pkgkitten. 147s Preparing to unpack .../146-r-cran-pkgkitten_0.2.4-1_all.deb ... 147s Unpacking r-cran-pkgkitten (0.2.4-1) ... 147s Selecting previously unselected package r-cran-rcpp. 147s Preparing to unpack .../147-r-cran-rcpp_1.0.13-1_amd64.deb ... 147s Unpacking r-cran-rcpp (1.0.13-1) ... 148s Selecting previously unselected package r-cran-collapse. 148s Preparing to unpack .../148-r-cran-collapse_2.0.16-1_amd64.deb ... 148s Unpacking r-cran-collapse (2.0.16-1) ... 148s Selecting previously unselected package r-cran-commonmark. 148s Preparing to unpack .../149-r-cran-commonmark_1.9.1-1_amd64.deb ... 148s Unpacking r-cran-commonmark (1.9.1-1) ... 148s Selecting previously unselected package r-cran-crayon. 148s Preparing to unpack .../150-r-cran-crayon_1.5.2-1_all.deb ... 148s Unpacking r-cran-crayon (1.5.2-1) ... 148s Selecting previously unselected package r-cran-dbi. 148s Preparing to unpack .../151-r-cran-dbi_1.2.3-1_all.deb ... 148s Unpacking r-cran-dbi (1.2.3-1) ... 148s Selecting previously unselected package r-cran-evaluate. 148s Preparing to unpack .../152-r-cran-evaluate_0.24.0-1_all.deb ... 148s Unpacking r-cran-evaluate (0.24.0-1) ... 148s Selecting previously unselected package r-cran-fnn. 148s Preparing to unpack .../153-r-cran-fnn_1.1.4.1-1_amd64.deb ... 148s Unpacking r-cran-fnn (1.1.4.1-1) ... 148s Selecting previously unselected package r-cran-fontawesome. 148s Preparing to unpack .../154-r-cran-fontawesome_0.5.2-1_all.deb ... 148s Unpacking r-cran-fontawesome (0.5.2-1) ... 148s Selecting previously unselected package r-cran-foreign. 148s Preparing to unpack .../155-r-cran-foreign_0.8.87-1_amd64.deb ... 148s Unpacking r-cran-foreign (0.8.87-1) ... 148s Selecting previously unselected package r-cran-formula. 148s Preparing to unpack .../156-r-cran-formula_1.2-5-1_all.deb ... 148s Unpacking r-cran-formula (1.2-5-1) ... 148s Selecting previously unselected package r-cran-generics. 148s Preparing to unpack .../157-r-cran-generics_0.1.3-1_all.deb ... 148s Unpacking r-cran-generics (0.1.3-1) ... 148s Selecting previously unselected package r-cran-lattice. 148s Preparing to unpack .../158-r-cran-lattice_0.22-6-1_amd64.deb ... 148s Unpacking r-cran-lattice (0.22-6-1) ... 148s Selecting previously unselected package r-cran-sp. 148s Preparing to unpack .../159-r-cran-sp_1%3a2.1-4+dfsg-1_amd64.deb ... 148s Unpacking r-cran-sp (1:2.1-4+dfsg-1) ... 148s Selecting previously unselected package r-cran-zoo. 148s Preparing to unpack .../160-r-cran-zoo_1.8-12-2_amd64.deb ... 148s Unpacking r-cran-zoo (1.8-12-2) ... 148s Selecting previously unselected package r-cran-magrittr. 148s Preparing to unpack .../161-r-cran-magrittr_2.0.3-1_amd64.deb ... 148s Unpacking r-cran-magrittr (2.0.3-1) ... 148s Selecting previously unselected package r-cran-wk. 148s Preparing to unpack .../162-r-cran-wk_0.9.4-1_amd64.deb ... 148s Unpacking r-cran-wk (0.9.4-1) ... 148s Selecting previously unselected package r-cran-s2. 148s Preparing to unpack .../163-r-cran-s2_1.1.6-1build2_amd64.deb ... 148s Unpacking r-cran-s2 (1.1.6-1build2) ... 148s Selecting previously unselected package r-cran-units. 148s Preparing to unpack .../164-r-cran-units_0.8-5+dfsg-1_amd64.deb ... 148s Unpacking r-cran-units (0.8-5+dfsg-1) ... 148s Selecting previously unselected package r-cran-sf. 148s Preparing to unpack .../165-r-cran-sf_1.0-16+dfsg-1build1_amd64.deb ... 148s Unpacking r-cran-sf (1.0-16+dfsg-1build1) ... 148s Selecting previously unselected package r-cran-sftime. 148s Preparing to unpack .../166-r-cran-sftime_0.2-0-6_all.deb ... 148s Unpacking r-cran-sftime (0.2-0-6) ... 148s Selecting previously unselected package r-cran-xts. 148s Preparing to unpack .../167-r-cran-xts_0.14.0-1_amd64.deb ... 148s Unpacking r-cran-xts (0.14.0-1) ... 148s Selecting previously unselected package r-cran-intervals. 148s Preparing to unpack .../168-r-cran-intervals_0.15.4-1_amd64.deb ... 148s Unpacking r-cran-intervals (0.15.4-1) ... 148s Selecting previously unselected package r-cran-spacetime. 148s Preparing to unpack .../169-r-cran-spacetime_1.3-2-1_all.deb ... 148s Unpacking r-cran-spacetime (1.3-2-1) ... 148s Selecting previously unselected package r-cran-stars. 148s Preparing to unpack .../170-r-cran-stars_0.6-6-1_all.deb ... 148s Unpacking r-cran-stars (0.6-6-1) ... 148s Selecting previously unselected package r-cran-gstat. 148s Preparing to unpack .../171-r-cran-gstat_2.1-2-1_amd64.deb ... 148s Unpacking r-cran-gstat (2.1-2-1) ... 148s Selecting previously unselected package r-cran-xfun. 148s Preparing to unpack .../172-r-cran-xfun_0.49+dfsg-1_amd64.deb ... 148s Unpacking r-cran-xfun (0.49+dfsg-1) ... 149s Selecting previously unselected package r-cran-highr. 149s Preparing to unpack .../173-r-cran-highr_0.11+dfsg-1_all.deb ... 149s Unpacking r-cran-highr (0.11+dfsg-1) ... 149s Selecting previously unselected package r-cran-later. 149s Preparing to unpack .../174-r-cran-later_1.3.2+dfsg-1_amd64.deb ... 149s Unpacking r-cran-later (1.3.2+dfsg-1) ... 149s Selecting previously unselected package r-cran-promises. 149s Preparing to unpack .../175-r-cran-promises_1.3.0+dfsg-1_amd64.deb ... 149s Unpacking r-cran-promises (1.3.0+dfsg-1) ... 149s Selecting previously unselected package r-cran-httpuv. 149s Preparing to unpack .../176-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 149s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 149s Selecting previously unselected package r-cran-isocodes. 149s Preparing to unpack .../177-r-cran-isocodes_2024.02.12-1_all.deb ... 149s Unpacking r-cran-isocodes (2024.02.12-1) ... 149s Selecting previously unselected package r-cran-yaml. 149s Preparing to unpack .../178-r-cran-yaml_2.3.8-2_amd64.deb ... 149s Unpacking r-cran-yaml (2.3.8-2) ... 149s Selecting previously unselected package libjs-mathjax. 149s Preparing to unpack .../179-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 149s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 149s Selecting previously unselected package r-cran-knitr. 149s Preparing to unpack .../180-r-cran-knitr_1.47+dfsg-1_all.deb ... 149s Unpacking r-cran-knitr (1.47+dfsg-1) ... 149s Selecting previously unselected package r-cran-lmtest. 149s Preparing to unpack .../181-r-cran-lmtest_0.9.40-1_amd64.deb ... 149s Unpacking r-cran-lmtest (0.9.40-1) ... 149s Selecting previously unselected package r-cran-maps. 149s Preparing to unpack .../182-r-cran-maps_3.4.2-1_amd64.deb ... 149s Unpacking r-cran-maps (3.4.2-1) ... 149s Selecting previously unselected package r-cran-mapdata. 149s Preparing to unpack .../183-r-cran-mapdata_2.3.1-1_amd64.deb ... 149s Unpacking r-cran-mapdata (2.3.1-1) ... 150s Selecting previously unselected package r-cran-markdown. 150s Preparing to unpack .../184-r-cran-markdown_1.12+dfsg-2_all.deb ... 150s Unpacking r-cran-markdown (1.12+dfsg-2) ... 150s Selecting previously unselected package r-cran-misctools. 150s Preparing to unpack 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basic.R 162s 162s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 162s Copyright (C) 2024 The R Foundation for Statistical Computing 162s Platform: x86_64-pc-linux-gnu 162s 162s R is free software and comes with ABSOLUTELY NO WARRANTY. 162s You are welcome to redistribute it under certain conditions. 162s Type 'license()' or 'licence()' for distribution details. 162s 162s R is a collaborative project with many contributors. 162s Type 'contributors()' for more information and 162s 'citation()' on how to cite R or R packages in publications. 162s 162s Type 'demo()' for some demos, 'help()' for on-line help, or 162s 'help.start()' for an HTML browser interface to help. 162s Type 'q()' to quit R. 162s 162s > options(digits=5) 162s > options(xts_check_TZ=FALSE) 162s > ################################################### 162s > ### chunk number 4: 162s > ################################################### 162s > library(sp) 163s > library(spacetime) 163s > set.seed(13579) # to make outcome a bit predictable! 163s > sp = cbind(x = c(0,0,1), y = c(0,1,1)) 163s > row.names(sp) = paste("point", 1:nrow(sp), sep="") 163s > sp = SpatialPoints(sp) 163s > time = as.POSIXct("2010-08-05", tz="GMT")+3600*(10:13) 163s > m = c(10,20,30) # means for each of the 3 point locations 163s > mydata = rnorm(length(sp)*length(time),mean=rep(m, 4)) 163s > IDs = paste("ID", 1:length(mydata), sep = "_") 163s > mydata = data.frame(values = signif(mydata,3), ID=IDs) 163s > stfdf = STFDF(sp, time, mydata) 163s > 163s > 163s > ################################################### 163s > ### chunk number 5: 163s > ################################################### 163s > format(as.data.frame(stfdf, row.names = IDs), tz="GMT") 163s x y sp.ID time endTime timeIndex values ID 163s ID_1 0 0 point1 2010-08-05 10:00:00 2010-08-05 11:00:00 1 8.77 ID_1 163s ID_2 0 1 point2 2010-08-05 10:00:00 2010-08-05 11:00:00 1 18.70 ID_2 163s ID_3 1 1 point3 2010-08-05 10:00:00 2010-08-05 11:00:00 1 29.70 ID_3 163s ID_4 0 0 point1 2010-08-05 11:00:00 2010-08-05 12:00:00 2 8.47 ID_4 163s ID_5 0 1 point2 2010-08-05 11:00:00 2010-08-05 12:00:00 2 21.10 ID_5 163s ID_6 1 1 point3 2010-08-05 11:00:00 2010-08-05 12:00:00 2 32.50 ID_6 163s ID_7 0 0 point1 2010-08-05 12:00:00 2010-08-05 13:00:00 3 10.80 ID_7 163s ID_8 0 1 point2 2010-08-05 12:00:00 2010-08-05 13:00:00 3 20.20 ID_8 163s ID_9 1 1 point3 2010-08-05 12:00:00 2010-08-05 13:00:00 3 29.00 ID_9 163s ID_10 0 0 point1 2010-08-05 13:00:00 2010-08-05 14:00:00 4 9.74 ID_10 163s ID_11 0 1 point2 2010-08-05 13:00:00 2010-08-05 14:00:00 4 20.70 ID_11 163s ID_12 1 1 point3 2010-08-05 13:00:00 2010-08-05 14:00:00 4 30.50 ID_12 163s > format(as(stfdf, "data.frame")[1:4,], tz="GMT") 163s x y sp.ID time endTime timeIndex values ID 163s 1 0 0 point1 2010-08-05 10:00:00 2010-08-05 11:00:00 1 8.77 ID_1 163s 2 0 1 point2 2010-08-05 10:00:00 2010-08-05 11:00:00 1 18.70 ID_2 163s 3 1 1 point3 2010-08-05 10:00:00 2010-08-05 11:00:00 1 29.70 ID_3 163s 4 0 0 point1 2010-08-05 11:00:00 2010-08-05 12:00:00 2 8.47 ID_4 163s > 163s > ################################################### 163s > ### chunk number 6: 163s > ################################################### 163s > unstack(stfdf) 163s point1 point2 point3 163s 2010-08-05 10:00:00 8.77 18.7 29.7 163s 2010-08-05 11:00:00 8.47 21.1 32.5 163s 2010-08-05 12:00:00 10.80 20.2 29.0 163s 2010-08-05 13:00:00 9.74 20.7 30.5 163s > t(unstack(stfdf)) 163s 2010-08-05 10:00:00 2010-08-05 11:00:00 2010-08-05 12:00:00 163s point1 8.77 8.47 10.8 163s point2 18.70 21.10 20.2 163s point3 29.70 32.50 29.0 163s 2010-08-05 13:00:00 163s point1 9.74 163s point2 20.70 163s point3 30.50 163s > unstack(stfdf, which = 2) 163s point1 point2 point3 163s 2010-08-05 10:00:00 ID_1 ID_2 ID_3 163s 2010-08-05 11:00:00 ID_4 ID_5 ID_6 163s 2010-08-05 12:00:00 ID_7 ID_8 ID_9 163s 2010-08-05 13:00:00 ID_10 ID_11 ID_12 163s > 163s > ################################################### 163s > ### chunk number 7: 163s > ################################################### 163s > as(stfdf[,,1], "xts") 163s point1 point2 point3 163s 2010-08-05 10:00:00 8.77 18.7 29.7 163s 2010-08-05 11:00:00 8.47 21.1 32.5 163s 2010-08-05 12:00:00 10.80 20.2 29.0 163s 2010-08-05 13:00:00 9.74 20.7 30.5 163s > as(stfdf[,,2], "xts") 163s point1 point2 point3 163s 2010-08-05 10:00:00 ID_1 ID_2 ID_3 163s 2010-08-05 11:00:00 ID_4 ID_5 ID_6 163s 2010-08-05 12:00:00 ID_7 ID_8 ID_9 163s 2010-08-05 13:00:00 ID_10 ID_11 ID_12 163s > 163s > ################################################### 163s > ### chunk number 8: 163s > ################################################### 163s > stfdf[[1]] 163s [1] 8.77 18.70 29.70 8.47 21.10 32.50 10.80 20.20 29.00 9.74 20.70 30.50 163s > stfdf[["values"]] 163s [1] 8.77 18.70 29.70 8.47 21.10 32.50 10.80 20.20 29.00 9.74 20.70 30.50 163s > stfdf[["newVal"]] <- rnorm(12) 163s > stfdf$ID 163s [1] "ID_1" "ID_2" "ID_3" "ID_4" "ID_5" "ID_6" "ID_7" "ID_8" "ID_9" 163s [10] "ID_10" "ID_11" "ID_12" 163s > stfdf$ID = paste("OldIDs", 1:12, sep="") 163s > stfdf$NewID = paste("NewIDs", 12:1, sep="") 163s > stfdf 163s An object of class "STFDF" 163s Slot "data": 163s values ID newVal NewID 163s 1 8.77 OldIDs1 -0.766670 NewIDs12 163s 2 18.70 OldIDs2 -0.437290 NewIDs11 163s 3 29.70 OldIDs3 -0.471551 NewIDs10 163s 4 8.47 OldIDs4 -0.561384 NewIDs9 163s 5 21.10 OldIDs5 -1.215165 NewIDs8 163s 6 32.50 OldIDs6 0.246818 NewIDs7 163s 7 10.80 OldIDs7 -0.861698 NewIDs6 163s 8 20.20 OldIDs8 0.659911 NewIDs5 163s 9 29.00 OldIDs9 -0.036842 NewIDs4 163s 10 9.74 OldIDs10 -0.952524 NewIDs3 163s 11 20.70 OldIDs11 -1.699710 NewIDs2 163s 12 30.50 OldIDs12 0.899851 NewIDs1 163s 163s Slot "sp": 163s SpatialPoints: 163s x y 163s point1 0 0 163s point2 0 1 163s point3 1 1 163s Coordinate Reference System (CRS) arguments: NA 163s 163s Slot "time": 163s timeIndex 163s 2010-08-05 10:00:00 1 163s 2010-08-05 11:00:00 2 163s 2010-08-05 12:00:00 3 163s 2010-08-05 13:00:00 4 163s 163s Slot "endTime": 163s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT" 163s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT" 163s 163s > 163s > 163s > ################################################### 163s > ### chunk number 9: 163s > ################################################### 163s > stfdf[,1] # SpatialPointsDataFrame: 163s coordinates values ID newVal NewID 163s 1 (0, 0) 8.77 OldIDs1 -0.76667 NewIDs12 163s 2 (0, 1) 18.70 OldIDs2 -0.43729 NewIDs11 163s 3 (1, 1) 29.70 OldIDs3 -0.47155 NewIDs10 163s > stfdf[,,1] 163s An object of class "STFDF" 163s Slot "data": 163s values 163s 1 8.77 163s 2 18.70 163s 3 29.70 163s 4 8.47 163s 5 21.10 163s 6 32.50 163s 7 10.80 163s 8 20.20 163s 9 29.00 163s 10 9.74 163s 11 20.70 163s 12 30.50 163s 163s Slot "sp": 163s SpatialPoints: 163s x y 163s point1 0 0 163s point2 0 1 163s point3 1 1 163s Coordinate Reference System (CRS) arguments: NA 163s 163s Slot "time": 163s timeIndex 163s 2010-08-05 10:00:00 1 163s 2010-08-05 11:00:00 2 163s 2010-08-05 12:00:00 3 163s 2010-08-05 13:00:00 4 163s 163s Slot "endTime": 163s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT" 163s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT" 163s 163s > stfdf[1,,1] # xts 163s values timeIndex 163s 2010-08-05 10:00:00 8.77 1 163s 2010-08-05 11:00:00 8.47 2 163s 2010-08-05 12:00:00 10.80 3 163s 2010-08-05 13:00:00 9.74 4 163s > stfdf[,,"ID"] 163s An object of class "STFDF" 163s Slot "data": 163s ID 163s 1 OldIDs1 163s 2 OldIDs2 163s 3 OldIDs3 163s 4 OldIDs4 163s 5 OldIDs5 163s 6 OldIDs6 163s 7 OldIDs7 163s 8 OldIDs8 163s 9 OldIDs9 163s 10 OldIDs10 163s 11 OldIDs11 163s 12 OldIDs12 163s 163s Slot "sp": 163s SpatialPoints: 163s x y 163s point1 0 0 163s point2 0 1 163s point3 1 1 163s Coordinate Reference System (CRS) arguments: NA 163s 163s Slot "time": 163s timeIndex 163s 2010-08-05 10:00:00 1 163s 2010-08-05 11:00:00 2 163s 2010-08-05 12:00:00 3 163s 2010-08-05 13:00:00 4 163s 163s Slot "endTime": 163s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT" 163s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT" 163s 163s > stfdf[1,,"values", drop=FALSE] # stays STFDF: 163s An object of class "STFDF" 163s Slot "data": 163s values 163s 1 8.77 163s 2 8.47 163s 3 10.80 163s 4 9.74 163s 163s Slot "sp": 163s SpatialPoints: 163s x y 163s point1 0 0 163s Coordinate Reference System (CRS) arguments: NA 163s 163s Slot "time": 163s timeIndex 163s 2010-08-05 10:00:00 1 163s 2010-08-05 11:00:00 2 163s 2010-08-05 12:00:00 3 163s 2010-08-05 13:00:00 4 163s 163s Slot "endTime": 163s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT" 163s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT" 163s 163s > stfdf[,1, drop=FALSE] #stays STFDF 163s An object of class "STFDF" 163s Slot "data": 163s values ID newVal NewID 163s 1 8.77 OldIDs1 -0.76667 NewIDs12 163s 2 18.70 OldIDs2 -0.43729 NewIDs11 163s 3 29.70 OldIDs3 -0.47155 NewIDs10 163s 163s Slot "sp": 163s SpatialPoints: 163s x y 163s point1 0 0 163s point2 0 1 163s point3 1 1 163s Coordinate Reference System (CRS) arguments: NA 163s 163s Slot "time": 163s timeIndex 163s 2010-08-05 10:00:00 1 163s 163s Slot "endTime": 163s [1] "2010-08-05 11:00:00 GMT" 163s 163s > 163s > ################################################### 163s > ### chunk number 10: 163s > ################################################### 163s > showClass("STSDF") 163s Class "STSDF" [package "spacetime"] 163s 163s Slots: 163s 163s Name: data index sp time endTime 163s Class: data.frame matrix Spatial xts POSIXct 163s 163s Extends: 163s Class "STS", directly 163s Class "ST", by class "STS", distance 2 163s > 163s > ################################################### 163s > ### chunk number 11: 163s > ################################################### 163s > showClass("STIDF") 163s Class "STIDF" [package "spacetime"] 163s 163s Slots: 163s 163s Name: data sp time endTime 163s Class: data.frame Spatial xts POSIXct 163s 163s Extends: 163s Class "STI", directly 163s Class "ST", by class "STI", distance 2 163s > sp = expand.grid(x = 1:3, y = 1:3) 163s > row.names(sp) = paste("point", 1:nrow(sp), sep="") 163s > sp = SpatialPoints(sp) 163s > time = as.POSIXct("2010-08-05", tz="GMT")+3600*(11:19) 163s > m = 1:9 * 10 # means for each of the 9 point locations 163s > mydata = rnorm(length(sp), mean=m) 163s > IDs = paste("ID",1:length(mydata)) 163s > mydata = data.frame(values = signif(mydata,3),ID=IDs) 163s > stidf = STIDF(sp, time, mydata) 163s > stidf 163s An object of class "STIDF" 163s Slot "data": 163s values ID 163s 1 10.7 ID 1 163s 2 19.8 ID 2 163s 3 29.2 ID 3 163s 4 41.8 ID 4 163s 5 50.2 ID 5 163s 6 59.9 ID 6 163s 7 70.9 ID 7 163s 8 80.0 ID 8 163s 9 90.2 ID 9 163s 163s Slot "sp": 163s SpatialPoints: 163s x y 163s point1 1 1 163s point2 2 1 163s point3 3 1 163s point4 1 2 163s point5 2 2 163s point6 3 2 163s point7 1 3 163s point8 2 3 163s point9 3 3 163s Coordinate Reference System (CRS) arguments: NA 163s 163s Slot "time": 163s timeIndex 163s 2010-08-05 11:00:00 1 163s 2010-08-05 12:00:00 2 163s 2010-08-05 13:00:00 3 163s 2010-08-05 14:00:00 4 163s 2010-08-05 15:00:00 5 163s 2010-08-05 16:00:00 6 163s 2010-08-05 17:00:00 7 163s 2010-08-05 18:00:00 8 163s 2010-08-05 19:00:00 9 163s 163s Slot "endTime": 163s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT" 163s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT" 163s [5] "2010-08-05 15:00:00 GMT" "2010-08-05 16:00:00 GMT" 163s [7] "2010-08-05 17:00:00 GMT" "2010-08-05 18:00:00 GMT" 163s [9] "2010-08-05 19:00:00 GMT" 163s 163s > 163s > 163s > ################################################### 163s > ### chunk number 12: 163s > ################################################### 163s > stidf[1:2,] 163s An object of class "STIDF" 163s Slot "data": 163s values ID 163s 1 10.7 ID 1 163s 2 19.8 ID 2 163s 163s Slot "sp": 163s SpatialPoints: 163s x y 163s point1 1 1 163s point2 2 1 163s Coordinate Reference System (CRS) arguments: NA 163s 163s Slot "time": 163s timeIndex 163s 2010-08-05 11:00:00 1 163s 2010-08-05 12:00:00 2 163s 163s Slot "endTime": 163s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT" 163s 163s > 163s > 163s > ################################################### 163s > ### chunk number 13: 163s > ################################################### 163s > stfdf[,time[3]] 163s coordinates values ID newVal NewID 163s 1 (0, 0) 9.74 OldIDs10 -0.95252 NewIDs3 163s 2 (0, 1) 20.70 OldIDs11 -1.69971 NewIDs2 163s 3 (1, 1) 30.50 OldIDs12 0.89985 NewIDs1 163s > 163s > 163s > ################################################### 163s > ### chunk number 14: 163s > ################################################### 163s > class(stfdf[,time[3],drop=FALSE]) 163s [1] "STFDF" 163s attr(,"package") 163s [1] "spacetime" 163s > 163s > ################################################### 163s > ### chunk number 15: 163s > ################################################### 163s > stfdf[1, , "values"] 163s values timeIndex 163s 2010-08-05 10:00:00 8.77 1 163s 2010-08-05 11:00:00 8.47 2 163s 2010-08-05 12:00:00 10.80 3 163s 2010-08-05 13:00:00 9.74 4 163s > 163s > ################################################### 163s > ### chunk number 16: 163s > ################################################### 163s > class(stfdf[1,drop=FALSE]) 163s [1] "STFDF" 163s attr(,"package") 163s [1] "spacetime" 163s > 163s > 163s > ################################################### 163s > ### chunk number 17: 163s > ################################################### 163s > class(stfdf) 163s [1] "STFDF" 163s attr(,"package") 163s [1] "spacetime" 163s > class(as(stfdf, "STSDF")) 163s [1] "STSDF" 163s attr(,"package") 163s [1] "spacetime" 163s > class(as(as(stfdf, "STSDF"), "STIDF")) 163s [1] "STIDF" 163s attr(,"package") 163s [1] "spacetime" 163s > class(as(stfdf, "STIDF")) 163s [1] "STIDF" 163s attr(,"package") 163s [1] "spacetime" 163s > 163s > 163s > ################################################### 163s > ### chunk number 18: 163s > ################################################### 163s > x = as(stfdf, "STIDF") 163s > class(as(x, "STSDF")) 163s [1] "STSDF" 163s attr(,"package") 163s [1] "spacetime" 163s > class(as(as(x, "STSDF"), "STFDF")) 163s [1] "STFDF" 163s attr(,"package") 163s [1] "spacetime" 163s > class(as(x, "STFDF")) 163s [1] "STFDF" 163s attr(,"package") 163s [1] "spacetime" 163s > xx = as(x, "STFDF") 163s > identical(stfdf, xx) 163s [1] TRUE 163s > 163s > stsdf = as(stfdf, "STSDF") 163s > stsdf[[1]] 163s [1] 8.77 18.70 29.70 8.47 21.10 32.50 10.80 20.20 29.00 9.74 20.70 30.50 163s > stsdf[["values"]] 163s [1] 8.77 18.70 29.70 8.47 21.10 32.50 10.80 20.20 29.00 9.74 20.70 30.50 163s > stsdf[["newVal"]] <- rnorm(12) 163s > stsdf$ID 163s [1] "OldIDs1" "OldIDs2" "OldIDs3" "OldIDs4" "OldIDs5" "OldIDs6" 163s [7] "OldIDs7" "OldIDs8" "OldIDs9" "OldIDs10" "OldIDs11" "OldIDs12" 163s > stsdf$ID = paste("OldIDs", 1:12, sep="") 163s > stsdf$NewID = paste("NewIDs", 12:1, sep="") 163s > stsdf 163s An object of class "STSDF" 163s Slot "data": 163s values ID newVal NewID 163s 1 8.77 OldIDs1 -1.24345 NewIDs12 163s 2 18.70 OldIDs2 -1.47698 NewIDs11 163s 3 29.70 OldIDs3 -0.84284 NewIDs10 163s 4 8.47 OldIDs4 1.54992 NewIDs9 163s 5 21.10 OldIDs5 1.04955 NewIDs8 163s 6 32.50 OldIDs6 1.35744 NewIDs7 163s 7 10.80 OldIDs7 1.33925 NewIDs6 163s 8 20.20 OldIDs8 0.77757 NewIDs5 163s 9 29.00 OldIDs9 0.39454 NewIDs4 163s 10 9.74 OldIDs10 0.15138 NewIDs3 163s 11 20.70 OldIDs11 -0.38780 NewIDs2 163s 12 30.50 OldIDs12 0.46815 NewIDs1 163s 163s Slot "index": 163s [,1] [,2] 163s [1,] 1 1 163s [2,] 2 1 163s [3,] 3 1 163s [4,] 1 2 163s [5,] 2 2 163s [6,] 3 2 163s [7,] 1 3 163s [8,] 2 3 163s [9,] 3 3 163s [10,] 1 4 163s [11,] 2 4 163s [12,] 3 4 163s 163s Slot "sp": 163s SpatialPoints: 163s x y 163s point1 0 0 163s point2 0 1 163s point3 1 1 163s Coordinate Reference System (CRS) arguments: NA 163s 163s Slot "time": 163s timeIndex 163s 2010-08-05 10:00:00 1 163s 2010-08-05 11:00:00 2 163s 2010-08-05 12:00:00 3 163s 2010-08-05 13:00:00 4 163s 163s Slot "endTime": 163s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT" 163s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT" 163s 163s > stsdf[,1] # SpatialPointsDataFrame: 163s coordinates values ID newVal NewID 163s 1 (0, 0) 8.77 OldIDs1 -1.24345 NewIDs12 163s 2 (0, 1) 18.70 OldIDs2 -1.47698 NewIDs11 163s 3 (1, 1) 29.70 OldIDs3 -0.84284 NewIDs10 163s > stsdf[,,1] 163s An object of class "STSDF" 163s Slot "data": 163s values 163s 1 8.77 163s 2 18.70 163s 3 29.70 163s 4 8.47 163s 5 21.10 163s 6 32.50 163s 7 10.80 163s 8 20.20 163s 9 29.00 163s 10 9.74 163s 11 20.70 163s 12 30.50 163s 163s Slot "index": 163s [,1] [,2] 163s [1,] 1 1 163s [2,] 2 1 163s [3,] 3 1 163s [4,] 1 2 163s [5,] 2 2 163s [6,] 3 2 163s [7,] 1 3 163s [8,] 2 3 163s [9,] 3 3 163s [10,] 1 4 163s [11,] 2 4 163s [12,] 3 4 163s 163s Slot "sp": 163s SpatialPoints: 163s x y 163s point1 0 0 163s point2 0 1 163s point3 1 1 163s Coordinate Reference System (CRS) arguments: NA 163s 163s Slot "time": 163s timeIndex 163s 2010-08-05 10:00:00 1 163s 2010-08-05 11:00:00 2 163s 2010-08-05 12:00:00 3 163s 2010-08-05 13:00:00 4 163s 163s Slot "endTime": 163s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT" 163s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT" 163s 163s > stsdf[1,,1] # xts 163s values timeIndex 163s 2010-08-05 10:00:00 8.77 1 163s 2010-08-05 11:00:00 8.47 2 163s 2010-08-05 12:00:00 10.80 3 163s 2010-08-05 13:00:00 9.74 4 163s > stsdf[,,"ID"] 163s An object of class "STSDF" 163s Slot "data": 163s ID 163s 1 OldIDs1 163s 2 OldIDs2 163s 3 OldIDs3 163s 4 OldIDs4 163s 5 OldIDs5 163s 6 OldIDs6 163s 7 OldIDs7 163s 8 OldIDs8 163s 9 OldIDs9 163s 10 OldIDs10 163s 11 OldIDs11 163s 12 OldIDs12 163s 163s Slot "index": 163s [,1] [,2] 163s [1,] 1 1 163s [2,] 2 1 163s [3,] 3 1 163s [4,] 1 2 163s [5,] 2 2 163s [6,] 3 2 163s [7,] 1 3 163s [8,] 2 3 163s [9,] 3 3 163s [10,] 1 4 163s [11,] 2 4 163s [12,] 3 4 163s 163s Slot "sp": 163s SpatialPoints: 163s x y 163s point1 0 0 163s point2 0 1 163s point3 1 1 163s Coordinate Reference System (CRS) arguments: NA 163s 163s Slot "time": 163s timeIndex 163s 2010-08-05 10:00:00 1 163s 2010-08-05 11:00:00 2 163s 2010-08-05 12:00:00 3 163s 2010-08-05 13:00:00 4 163s 163s Slot "endTime": 163s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT" 163s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT" 163s 163s > stsdf[1,,"values", drop=FALSE] # stays STIDF: 163s An object of class "STSDF" 163s Slot "data": 163s values 163s 1 8.77 163s 4 8.47 163s 7 10.80 163s 10 9.74 163s 163s Slot "index": 163s [,1] [,2] 163s [1,] 1 1 163s [2,] 1 2 163s [3,] 1 3 163s [4,] 1 4 163s 163s Slot "sp": 163s SpatialPoints: 163s x y 163s point1 0 0 163s Coordinate Reference System (CRS) arguments: NA 163s 163s Slot "time": 163s timeIndex 163s 2010-08-05 10:00:00 1 163s 2010-08-05 11:00:00 2 163s 2010-08-05 12:00:00 3 163s 2010-08-05 13:00:00 4 163s 163s Slot "endTime": 163s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT" 163s [3] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT" 163s 163s > stsdf[,1, drop=FALSE] #stays STIDF 163s An object of class "STSDF" 163s Slot "data": 163s values ID newVal NewID 163s 1 8.77 OldIDs1 -1.24345 NewIDs12 163s 2 18.70 OldIDs2 -1.47698 NewIDs11 163s 3 29.70 OldIDs3 -0.84284 NewIDs10 163s 163s Slot "index": 163s [,1] [,2] 163s [1,] 1 1 163s [2,] 2 1 163s [3,] 3 1 163s 163s Slot "sp": 163s SpatialPoints: 163s x y 163s point1 0 0 163s point2 0 1 163s point3 1 1 163s Coordinate Reference System (CRS) arguments: NA 163s 163s Slot "time": 163s timeIndex 163s 2010-08-05 10:00:00 1 163s 163s Slot "endTime": 163s [1] "2010-08-05 11:00:00 GMT" 163s 163s > format(as.data.frame(stsdf), tz="GMT") 163s x y sp.ID time endTime timeIndex values ID 163s 1 0 0 point1 2010-08-05 10:00:00 2010-08-05 11:00:00 1 8.77 OldIDs1 163s 2 0 1 point2 2010-08-05 10:00:00 2010-08-05 11:00:00 1 18.70 OldIDs2 163s 3 1 1 point3 2010-08-05 10:00:00 2010-08-05 11:00:00 1 29.70 OldIDs3 163s 4 0 0 point1 2010-08-05 11:00:00 2010-08-05 12:00:00 2 8.47 OldIDs4 163s 5 0 1 point2 2010-08-05 11:00:00 2010-08-05 12:00:00 2 21.10 OldIDs5 163s 6 1 1 point3 2010-08-05 11:00:00 2010-08-05 12:00:00 2 32.50 OldIDs6 163s 7 0 0 point1 2010-08-05 12:00:00 2010-08-05 13:00:00 3 10.80 OldIDs7 163s 8 0 1 point2 2010-08-05 12:00:00 2010-08-05 13:00:00 3 20.20 OldIDs8 163s 9 1 1 point3 2010-08-05 12:00:00 2010-08-05 13:00:00 3 29.00 OldIDs9 163s 10 0 0 point1 2010-08-05 13:00:00 2010-08-05 14:00:00 4 9.74 OldIDs10 163s 11 0 1 point2 2010-08-05 13:00:00 2010-08-05 14:00:00 4 20.70 OldIDs11 163s 12 1 1 point3 2010-08-05 13:00:00 2010-08-05 14:00:00 4 30.50 OldIDs12 163s newVal NewID 163s 1 -1.24345 NewIDs12 163s 2 -1.47698 NewIDs11 163s 3 -0.84284 NewIDs10 163s 4 1.54992 NewIDs9 163s 5 1.04955 NewIDs8 163s 6 1.35744 NewIDs7 163s 7 1.33925 NewIDs6 163s 8 0.77757 NewIDs5 163s 9 0.39454 NewIDs4 163s 10 0.15138 NewIDs3 163s 11 -0.38780 NewIDs2 163s 12 0.46815 NewIDs1 163s > format(as(stsdf, "data.frame"), tz="GMT") 163s x y sp.ID time endTime timeIndex values ID 163s 1 0 0 point1 2010-08-05 10:00:00 2010-08-05 11:00:00 1 8.77 OldIDs1 163s 2 0 1 point2 2010-08-05 10:00:00 2010-08-05 11:00:00 1 18.70 OldIDs2 163s 3 1 1 point3 2010-08-05 10:00:00 2010-08-05 11:00:00 1 29.70 OldIDs3 163s 4 0 0 point1 2010-08-05 11:00:00 2010-08-05 12:00:00 2 8.47 OldIDs4 163s 5 0 1 point2 2010-08-05 11:00:00 2010-08-05 12:00:00 2 21.10 OldIDs5 163s 6 1 1 point3 2010-08-05 11:00:00 2010-08-05 12:00:00 2 32.50 OldIDs6 163s 7 0 0 point1 2010-08-05 12:00:00 2010-08-05 13:00:00 3 10.80 OldIDs7 163s 8 0 1 point2 2010-08-05 12:00:00 2010-08-05 13:00:00 3 20.20 OldIDs8 163s 9 1 1 point3 2010-08-05 12:00:00 2010-08-05 13:00:00 3 29.00 OldIDs9 163s 10 0 0 point1 2010-08-05 13:00:00 2010-08-05 14:00:00 4 9.74 OldIDs10 163s 11 0 1 point2 2010-08-05 13:00:00 2010-08-05 14:00:00 4 20.70 OldIDs11 163s 12 1 1 point3 2010-08-05 13:00:00 2010-08-05 14:00:00 4 30.50 OldIDs12 163s newVal NewID 163s 1 -1.24345 NewIDs12 163s 2 -1.47698 NewIDs11 163s 3 -0.84284 NewIDs10 163s 4 1.54992 NewIDs9 163s 5 1.04955 NewIDs8 163s 6 1.35744 NewIDs7 163s 7 1.33925 NewIDs6 163s 8 0.77757 NewIDs5 163s 9 0.39454 NewIDs4 163s 10 0.15138 NewIDs3 163s 11 -0.38780 NewIDs2 163s 12 0.46815 NewIDs1 163s > 163s > stidf = as(stfdf, "STIDF") 163s > stidf[[1]] 163s [1] 8.77 18.70 29.70 8.47 21.10 32.50 10.80 20.20 29.00 9.74 20.70 30.50 163s > stidf[["values"]] 163s [1] 8.77 18.70 29.70 8.47 21.10 32.50 10.80 20.20 29.00 9.74 20.70 30.50 163s > stidf[["newVal"]] <- rnorm(12) 163s > stidf$ID 163s [1] "OldIDs1" "OldIDs2" "OldIDs3" "OldIDs4" "OldIDs5" "OldIDs6" 163s [7] "OldIDs7" "OldIDs8" "OldIDs9" "OldIDs10" "OldIDs11" "OldIDs12" 163s > stidf$ID = paste("OldIDs", 1:12, sep="") 163s > stidf$NewID = paste("NewIDs", 12:1, sep="") 163s > stidf 163s An object of class "STIDF" 163s Slot "data": 163s values ID newVal NewID 163s 1 8.77 OldIDs1 1.67415 NewIDs12 163s 2 18.70 OldIDs2 -1.47819 NewIDs11 163s 3 29.70 OldIDs3 -1.63290 NewIDs10 163s 4 8.47 OldIDs4 -0.97491 NewIDs9 163s 5 21.10 OldIDs5 -0.76499 NewIDs8 163s 6 32.50 OldIDs6 0.10300 NewIDs7 163s 7 10.80 OldIDs7 -1.06830 NewIDs6 163s 8 20.20 OldIDs8 0.47947 NewIDs5 163s 9 29.00 OldIDs9 1.17482 NewIDs4 163s 10 9.74 OldIDs10 1.03354 NewIDs3 163s 11 20.70 OldIDs11 0.82826 NewIDs2 163s 12 30.50 OldIDs12 -0.75862 NewIDs1 163s 163s Slot "sp": 163s SpatialPoints: 163s x y 163s point1 0 0 163s point2 0 1 163s point3 1 1 163s point1.1 0 0 163s point2.1 0 1 163s point3.1 1 1 163s point1.2 0 0 163s point2.2 0 1 163s point3.2 1 1 163s point1.3 0 0 163s point2.3 0 1 163s point3.3 1 1 163s Coordinate Reference System (CRS) arguments: NA 163s 163s Slot "time": 163s timeIndex 163s 2010-08-05 10:00:00 1 163s 2010-08-05 10:00:00 1 163s 2010-08-05 10:00:00 1 163s 2010-08-05 11:00:00 2 163s 2010-08-05 11:00:00 2 163s 2010-08-05 11:00:00 2 163s 2010-08-05 12:00:00 3 163s 2010-08-05 12:00:00 3 163s 2010-08-05 12:00:00 3 163s 2010-08-05 13:00:00 4 163s 2010-08-05 13:00:00 4 163s 2010-08-05 13:00:00 4 163s 163s Slot "endTime": 163s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 11:00:00 GMT" 163s [3] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT" 163s [5] "2010-08-05 12:00:00 GMT" "2010-08-05 12:00:00 GMT" 163s [7] "2010-08-05 13:00:00 GMT" "2010-08-05 13:00:00 GMT" 163s [9] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT" 163s [11] "2010-08-05 14:00:00 GMT" "2010-08-05 14:00:00 GMT" 163s 163s > stidf[,1] # SpatialPointsDataFrame: 163s An object of class "STIDF" 163s Slot "data": 163s values ID newVal NewID 163s 1 8.77 OldIDs1 1.6741 NewIDs12 163s 163s Slot "sp": 163s SpatialPoints: 163s x y 163s point1 0 0 163s Coordinate Reference System (CRS) arguments: NA 163s 163s Slot "time": 163s timeIndex 163s 2010-08-05 10:00:00 1 163s 163s Slot "endTime": 163s [1] "2010-08-05 11:00:00 GMT" 163s 163s > stidf[,,1] 163s An object of class "STIDF" 163s Slot "data": 163s values 163s 1 8.77 163s 2 18.70 163s 3 29.70 163s 4 8.47 163s 5 21.10 163s 6 32.50 163s 7 10.80 163s 8 20.20 163s 9 29.00 163s 10 9.74 163s 11 20.70 163s 12 30.50 163s 163s Slot "sp": 163s SpatialPoints: 163s x y 163s point1 0 0 163s point2 0 1 163s point3 1 1 163s point1.1 0 0 163s point2.1 0 1 163s point3.1 1 1 163s point1.2 0 0 163s point2.2 0 1 163s point3.2 1 1 163s point1.3 0 0 163s point2.3 0 1 163s point3.3 1 1 163s Coordinate Reference System (CRS) arguments: NA 163s 163s Slot "time": 163s timeIndex 163s 2010-08-05 10:00:00 1 163s 2010-08-05 10:00:00 1 163s 2010-08-05 10:00:00 1 163s 2010-08-05 11:00:00 2 163s 2010-08-05 11:00:00 2 163s 2010-08-05 11:00:00 2 163s 2010-08-05 12:00:00 3 163s 2010-08-05 12:00:00 3 163s 2010-08-05 12:00:00 3 163s 2010-08-05 13:00:00 4 163s 2010-08-05 13:00:00 4 163s 2010-08-05 13:00:00 4 163s 163s Slot "endTime": 163s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 11:00:00 GMT" 163s [3] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT" 163s [5] "2010-08-05 12:00:00 GMT" "2010-08-05 12:00:00 GMT" 163s [7] "2010-08-05 13:00:00 GMT" "2010-08-05 13:00:00 GMT" 163s [9] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT" 163s [11] "2010-08-05 14:00:00 GMT" "2010-08-05 14:00:00 GMT" 163s 163s > stidf[1,,1] # xts 163s An object of class "STIDF" 163s Slot "data": 163s values 163s 1 8.77 163s 163s Slot "sp": 163s SpatialPoints: 163s x y 163s point1 0 0 163s Coordinate Reference System (CRS) arguments: NA 163s 163s Slot "time": 163s timeIndex 163s 2010-08-05 10:00:00 1 163s 163s Slot "endTime": 163s [1] "2010-08-05 11:00:00 GMT" 163s 163s > stidf[,,"ID"] 163s An object of class "STIDF" 163s Slot "data": 163s ID 163s 1 OldIDs1 163s 2 OldIDs2 163s 3 OldIDs3 163s 4 OldIDs4 163s 5 OldIDs5 163s 6 OldIDs6 163s 7 OldIDs7 163s 8 OldIDs8 163s 9 OldIDs9 163s 10 OldIDs10 163s 11 OldIDs11 163s 12 OldIDs12 163s 163s Slot "sp": 163s SpatialPoints: 163s x y 163s point1 0 0 163s point2 0 1 163s point3 1 1 163s point1.1 0 0 163s point2.1 0 1 163s point3.1 1 1 163s point1.2 0 0 163s point2.2 0 1 163s point3.2 1 1 163s point1.3 0 0 163s point2.3 0 1 163s point3.3 1 1 163s Coordinate Reference System (CRS) arguments: NA 163s 163s Slot "time": 163s timeIndex 163s 2010-08-05 10:00:00 1 163s 2010-08-05 10:00:00 1 163s 2010-08-05 10:00:00 1 163s 2010-08-05 11:00:00 2 163s 2010-08-05 11:00:00 2 163s 2010-08-05 11:00:00 2 163s 2010-08-05 12:00:00 3 163s 2010-08-05 12:00:00 3 163s 2010-08-05 12:00:00 3 163s 2010-08-05 13:00:00 4 163s 2010-08-05 13:00:00 4 163s 2010-08-05 13:00:00 4 163s 163s Slot "endTime": 163s [1] "2010-08-05 11:00:00 GMT" "2010-08-05 11:00:00 GMT" 163s [3] "2010-08-05 11:00:00 GMT" "2010-08-05 12:00:00 GMT" 163s [5] "2010-08-05 12:00:00 GMT" "2010-08-05 12:00:00 GMT" 163s [7] "2010-08-05 13:00:00 GMT" "2010-08-05 13:00:00 GMT" 163s [9] "2010-08-05 13:00:00 GMT" "2010-08-05 14:00:00 GMT" 163s [11] "2010-08-05 14:00:00 GMT" "2010-08-05 14:00:00 GMT" 163s 163s > stidf[1,,"values", drop=FALSE] # stays STIDF: 163s An object of class "STIDF" 163s Slot "data": 163s values 163s 1 8.77 163s 163s Slot "sp": 163s SpatialPoints: 163s x y 163s point1 0 0 163s Coordinate Reference System (CRS) arguments: NA 163s 163s Slot "time": 163s timeIndex 163s 2010-08-05 10:00:00 1 163s 163s Slot "endTime": 163s [1] "2010-08-05 11:00:00 GMT" 163s 163s > stidf[,1, drop=FALSE] #stays STIDF 163s An object of class "STIDF" 163s Slot "data": 163s values ID newVal NewID 163s 1 8.77 OldIDs1 1.6741 NewIDs12 163s 163s Slot "sp": 163s SpatialPoints: 163s x y 163s point1 0 0 163s Coordinate Reference System (CRS) arguments: NA 163s 163s Slot "time": 163s Loading required package: zoo 163s 163s Attaching package: ‘zoo’ 163s 163s The following objects are masked from ‘package:base’: 163s 163s as.Date, as.Date.numeric 163s 163s Error in .checkAttrIsUnique(object@sp, object@time, object@data) : 163s name conflict: attribute name(s) in data already present in sp slot of ST object 163s timeIndex 163s 2010-08-05 10:00:00 1 163s 163s Slot "endTime": 163s [1] "2010-08-05 11:00:00 GMT" 163s 163s > format(as.data.frame(stidf), tz="GMT") 163s x y sp.ID time endTime timeIndex values 163s 1 0 0 point1 2010-08-05 10:00:00 2010-08-05 11:00:00 1 8.77 163s 2 0 1 point2 2010-08-05 10:00:00 2010-08-05 11:00:00 1 18.70 163s 3 1 1 point3 2010-08-05 10:00:00 2010-08-05 11:00:00 1 29.70 163s 4 0 0 point1.1 2010-08-05 11:00:00 2010-08-05 12:00:00 2 8.47 163s 5 0 1 point2.1 2010-08-05 11:00:00 2010-08-05 12:00:00 2 21.10 163s 6 1 1 point3.1 2010-08-05 11:00:00 2010-08-05 12:00:00 2 32.50 163s 7 0 0 point1.2 2010-08-05 12:00:00 2010-08-05 13:00:00 3 10.80 163s 8 0 1 point2.2 2010-08-05 12:00:00 2010-08-05 13:00:00 3 20.20 163s 9 1 1 point3.2 2010-08-05 12:00:00 2010-08-05 13:00:00 3 29.00 163s 10 0 0 point1.3 2010-08-05 13:00:00 2010-08-05 14:00:00 4 9.74 163s 11 0 1 point2.3 2010-08-05 13:00:00 2010-08-05 14:00:00 4 20.70 163s 12 1 1 point3.3 2010-08-05 13:00:00 2010-08-05 14:00:00 4 30.50 163s ID newVal NewID 163s 1 OldIDs1 1.67415 NewIDs12 163s 2 OldIDs2 -1.47819 NewIDs11 163s 3 OldIDs3 -1.63290 NewIDs10 163s 4 OldIDs4 -0.97491 NewIDs9 163s 5 OldIDs5 -0.76499 NewIDs8 163s 6 OldIDs6 0.10300 NewIDs7 163s 7 OldIDs7 -1.06830 NewIDs6 163s 8 OldIDs8 0.47947 NewIDs5 163s 9 OldIDs9 1.17482 NewIDs4 163s 10 OldIDs10 1.03354 NewIDs3 163s 11 OldIDs11 0.82826 NewIDs2 163s 12 OldIDs12 -0.75862 NewIDs1 163s > format(as(stidf, "data.frame"), tz="GMT") 163s x y sp.ID time endTime timeIndex values 163s 1 0 0 point1 2010-08-05 10:00:00 2010-08-05 11:00:00 1 8.77 163s 2 0 1 point2 2010-08-05 10:00:00 2010-08-05 11:00:00 1 18.70 163s 3 1 1 point3 2010-08-05 10:00:00 2010-08-05 11:00:00 1 29.70 163s 4 0 0 point1.1 2010-08-05 11:00:00 2010-08-05 12:00:00 2 8.47 163s 5 0 1 point2.1 2010-08-05 11:00:00 2010-08-05 12:00:00 2 21.10 163s 6 1 1 point3.1 2010-08-05 11:00:00 2010-08-05 12:00:00 2 32.50 163s 7 0 0 point1.2 2010-08-05 12:00:00 2010-08-05 13:00:00 3 10.80 163s 8 0 1 point2.2 2010-08-05 12:00:00 2010-08-05 13:00:00 3 20.20 163s 9 1 1 point3.2 2010-08-05 12:00:00 2010-08-05 13:00:00 3 29.00 163s 10 0 0 point1.3 2010-08-05 13:00:00 2010-08-05 14:00:00 4 9.74 163s 11 0 1 point2.3 2010-08-05 13:00:00 2010-08-05 14:00:00 4 20.70 163s 12 1 1 point3.3 2010-08-05 13:00:00 2010-08-05 14:00:00 4 30.50 163s ID newVal NewID 163s 1 OldIDs1 1.67415 NewIDs12 163s 2 OldIDs2 -1.47819 NewIDs11 163s 3 OldIDs3 -1.63290 NewIDs10 163s 4 OldIDs4 -0.97491 NewIDs9 163s 5 OldIDs5 -0.76499 NewIDs8 163s 6 OldIDs6 0.10300 NewIDs7 163s 7 OldIDs7 -1.06830 NewIDs6 163s 8 OldIDs8 0.47947 NewIDs5 163s 9 OldIDs9 1.17482 NewIDs4 163s 10 OldIDs10 1.03354 NewIDs3 163s 11 OldIDs11 0.82826 NewIDs2 163s 12 OldIDs12 -0.75862 NewIDs1 163s > 163s > sp = cbind(x = c(0,0,1), y = c(0,1,1)) 163s > row.names(sp) = paste("point", 1:nrow(sp), sep="") 163s > sp = SpatialPoints(sp) 163s > library(xts) 163s > time = xts(1:4, as.POSIXct("2010-08-05", tz="GMT")+3600*(10:13)) 163s > mydata = rnorm(length(sp)*length(time),mean=rep(m, 4)) 163s > IDs = paste("ID", 1:length(mydata), sep = "_") 163s > mydata = data.frame(values = signif(mydata,3), ID=IDs) 163s > spx = SpatialPointsDataFrame(sp, data.frame(values = c("a", "b", "c"))) 163s > try(stfdf <- STFDF(spx, time, mydata)) 163s > timex = time 163s > names(timex) = "values" 163s > try(stfdf <- STFDF(sp, timex, mydata)) 163s > mydatax = mydata 163s > names(mydatax) = "x" 163s > try(stfdf <- STFDF(spx, timex, mydatax)) 163s Error in .checkAttrIsUnique(object@sp, object@time, object@data) : 163s name conflict: attribute name(s) in data already present in time slot of ST object 163s > stfdf = STFDF(sp, timex, mydatax) 163s Error in validityMethod(object) : 163s name conflict: attribute names in sp and time slot must differ 163s > try(stfdf[["values"]] <- 1:12) 163s > stfdf = STFDF(spx, time, mydatax) 163s Error in .checkAttrIsUnique(x@sp, x@time, x@data) : 163s name conflict: attribute name(s) in data already present in time slot of ST object 163s > try(stfdf[["values"]] <- 1:12) 163s Error in .checkAttrIsUnique(x@sp, x@time, x@data) : 163s name conflict: attribute name(s) in data already present in sp slot of ST object 163s > 163s BEGIN TEST over.R 163s 163s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 163s Copyright (C) 2024 The R Foundation for Statistical Computing 163s Platform: x86_64-pc-linux-gnu 163s 163s R is free software and comes with ABSOLUTELY NO WARRANTY. 163s You are welcome to redistribute it under certain conditions. 163s Type 'license()' or 'licence()' for distribution details. 163s 163s R is a collaborative project with many contributors. 163s Type 'contributors()' for more information and 163s 'citation()' on how to cite R or R packages in publications. 163s 163s Type 'demo()' for some demos, 'help()' for on-line help, or 163s 'help.start()' for an HTML browser interface to help. 163s Type 'q()' to quit R. 163s 163s > require(sp) 163s Loading required package: sp 163s > require(spacetime) 163s Loading required package: spacetime 164s > options(xts_check_TZ=FALSE) 164s > 164s > # go through time matching first: 164s > x = as.POSIXct("2000-01-01", tz="GMT") + (0:9) * 3600 164s > y = x + 1 164s > y[1] = y[2] 164s > format(x, tz="GMT") 164s [1] "2000-01-01 00:00:00" "2000-01-01 01:00:00" "2000-01-01 02:00:00" 164s [4] "2000-01-01 03:00:00" "2000-01-01 04:00:00" "2000-01-01 05:00:00" 164s [7] "2000-01-01 06:00:00" "2000-01-01 07:00:00" "2000-01-01 08:00:00" 164s [10] "2000-01-01 09:00:00" 164s > format(y, tz="GMT") 164s [1] "2000-01-01 01:00:01" "2000-01-01 01:00:01" "2000-01-01 02:00:01" 164s [4] "2000-01-01 03:00:01" "2000-01-01 04:00:01" "2000-01-01 05:00:01" 164s [7] "2000-01-01 06:00:01" "2000-01-01 07:00:01" "2000-01-01 08:00:01" 164s [10] "2000-01-01 09:00:01" 164s > end.x = delta(x) 164s > end.y = delta(y) 164s > timeMatch(y, y) 164s [1] 1 1 3 4 5 6 7 8 9 10 164s > timeMatch(y, y, end.x = end.y, end.y = end.y) 164s [1] NA 2 3 4 5 6 7 8 9 10 164s > 164s > timeMatch(x, y) 164s [1] NA NA NA NA NA NA NA NA NA NA 164s > timeMatch(x, y, end.y = end.y) 164s Warning messages: 164s 1: Some empty 'to' intervals encountered. Setting to NA... 164s 2: Some empty 'from' intervals encountered. Setting to NA... 164s [1] NA NA 2 3 4 5 6 7 8 9 164s > timeMatch(x, y, end.x = end.x) 164s Warning message: 164s Some empty 'to' intervals encountered. Setting to NA... 164s [1] NA 1 3 4 5 6 7 8 9 10 164s > timeMatch(x, y, end.x = end.x, end.y = end.y) 164s Warning message: 164s Some empty 'to' intervals encountered. Setting to NA... 164s [1] NA 2 2 3 4 5 6 7 8 9 164s > 164s > timeMatch(x, y, returnList = TRUE) 164s [[1]] 164s integer(0) 164s 164s [[2]] 164s integer(0) 164s 164s [[3]] 164s integer(0) 164s 164s [[4]] 164s integer(0) 164s 164s [[5]] 164s integer(0) 164s 164s [[6]] 164s integer(0) 164s 164s [[7]] 164s integer(0) 164s 164s [[8]] 164s integer(0) 164s 164s [[9]] 164s integer(0) 164s 164s [[10]] 164s integer(0) 164s 164s > timeMatch(x, y, returnList = TRUE, end.y = end.y) 164s [[1]] 164s integer(0) 164s 164s [[2]] 164s integer(0) 164s 164s [[3]] 164s [1] 2 164s 164s [[4]] 164s [1] 3 164s 164s [[5]] 164s [1] 4 164s 164s [[6]] 164s [1] 5 164s 164s [[7]] 164s [1] 6 164s 164s [[8]] 164s [1] 7 164s 164s [[9]] 164s [1] 8 164s 164s [[10]] 164s [1] 9 164s 164s > timeMatch(x, y, returnList = TRUE, end.x = end.x) 164s Warning message: 164s Some empty 'to' intervals encountered. Setting to NA... 164s [[1]] 164s integer(0) 164s 164s [[2]] 164s [1] 1 2 164s 164s [[3]] 164s [1] 3 164s 164s [[4]] 164s [1] 4 164s 164s [[5]] 164s [1] 5 164s 164s [[6]] 164s [1] 6 164s 164s [[7]] 164s [1] 7 164s 164s [[8]] 164s [1] 8 164s 164s [[9]] 164s [1] 9 164s 164s [[10]] 164s [1] 10 164s 164s > timeMatch(x, y, returnList = TRUE, end.x = end.x, end.y = end.y) 164s [[1]] 164s integer(0) 164s 164s [[2]] 164s [1] 2 164s 164s [[3]] 164s [1] 2 3 164s 164s [[4]] 164s [1] 3 4 164s 164s [[5]] 164s [1] 4 5 164s 164s [[6]] 164s [1] 5 6 164s 164s [[7]] 164s [1] 6 7 164s 164s [[8]] 164s [1] 7 8 164s 164s [[9]] 164s [1] 8 9 164s 164s [[10]] 164s [1] 9 10 164s 164s > 164s > end.x = delta(x) 164s Warning message: 164s Some empty 'to' intervals encountered. Setting to NA... 164s > y = x + 1 # don't replicate the first 164s > end.y = delta(y) 164s > 164s > a = timeMatch(x, y, end.x = end.x, end.y = end.y) 164s > library(intervals) 164s > b = timeMatch(x, y, end.x = end.x, end.y = end.y) 164s > detach() 164s > all.equal(a, b) 164s [1] TRUE 164s > 164s > a = timeMatch(x, y, end.y = end.y) 164s > library(intervals) 164s > b = timeMatch(x, y, end.y = end.y) 164s > detach() 164s > all.equal(a, b) 164s [1] TRUE 164s > 164s > a = timeMatch(x, y, end.x = end.x) 164s > library(intervals) 164s > b = timeMatch(x, y, end.x = end.x) 164s > detach() 164s > all.equal(a, b) 164s [1] TRUE 164s > 164s > # with end points: 164s > 164s > # next, try ST?DF objects: 164s > t = as.POSIXct("2010-05-01", tz="GMT")+3600*1:10 164s > xy = SpatialPixels(SpatialPoints(expand.grid(1:10,1:10))) 164s > y = STFDF(xy, t, data.frame(a = 1:1000)) 164s > stplot(y) 164s > x = y 164s > all(over(x, y) == 1:1000) 164s [1] TRUE 164s > 164s > t0 = c(t[1]-1,t[c(2,4,10)]) # c() drops TZ? 164s > attr(t0, "tzone") = attr(t, "tzone") 164s > x = c(4,5,6,8) 164s > xy = SpatialPixels(SpatialPoints(expand.grid(x,rep(1,4)))) 164s Warning messages: 164s 1: In points2grid(points, tolerance, round) : 164s grid has empty column/rows in dimension 1 164s 2: In points2grid(points, tolerance, round) : 164s cell size from constant coordinate 2 possibly taken from other coordinate 164s > x = STFDF(xy, t0, data.frame(a = 1:64)) 164s > over(x, y) 164s a 164s 1 4 164s 2 5 164s 3 6 164s 4 8 164s 5 4 164s 6 5 164s 7 6 164s 8 8 164s 9 4 164s 10 5 164s 11 6 164s 12 8 164s 13 4 164s 14 5 164s 15 6 164s 16 8 164s 17 104 164s 18 105 164s 19 106 164s 20 108 164s 21 104 164s 22 105 164s 23 106 164s 24 108 164s 25 104 164s 26 105 164s 27 106 164s 28 108 164s 29 104 164s 30 105 164s 31 106 164s 32 108 164s 33 304 164s 34 305 164s 35 306 164s 36 308 164s 37 304 164s 38 305 164s 39 306 164s 40 308 164s 41 304 164s 42 305 164s 43 306 164s 44 308 164s 45 304 164s 46 305 164s 47 306 164s 48 308 164s 49 904 164s 50 905 164s 51 906 164s 52 908 164s 53 904 164s 54 905 164s 55 906 164s 56 908 164s 57 904 164s 58 905 164s 59 906 164s 60 908 164s 61 904 164s 62 905 164s 63 906 164s 64 908 164s > 164s > x = as(x, "STSDF") 164s > over(x, y) 164s a 164s 1 4 164s 2 5 164s 3 6 164s 4 8 164s 5 4 164s 6 5 164s 7 6 164s 8 8 164s 9 4 164s 10 5 164s 11 6 164s 12 8 164s 13 4 164s 14 5 164s 15 6 164s 16 8 164s 17 104 164s 18 105 164s 19 106 164s 20 108 164s 21 104 164s 22 105 164s 23 106 164s 24 108 164s 25 104 164s 26 105 164s 27 106 164s 28 108 164s 29 104 164s 30 105 164s 31 106 164s 32 108 164s 33 304 164s 34 305 164s 35 306 164s 36 308 164s 37 304 164s 38 305 164s 39 306 164s 40 308 164s 41 304 164s 42 305 164s 43 306 164s 44 308 164s 45 304 164s 46 305 164s 47 306 164s 48 308 164s 49 904 164s 50 905 164s 51 906 164s 52 908 164s 53 904 164s 54 905 164s 55 906 164s 56 908 164s 57 904 164s 58 905 164s 59 906 164s 60 908 164s 61 904 164s 62 905 164s 63 906 164s 64 908 164s > 164s > xy = SpatialPoints(cbind(c(1,3,5,10),c(5, 3, 8, 2))) 164s > x = STIDF(xy, t0, data.frame(a = 1:4)) 164s > over(x,y) 164s a 164s 1 NA 164s 2 123 164s 3 375 164s 4 920 164s > 164s > t1 = c(t[1]-1,t[c(2,2,10)]) 164s > attr(t1, "tzone") = attr(t, "tzone") 164s > x1 = STIDF(xy[c(1,2,2,4)], t1, data.frame(a = 1:4)) 164s > 164s > over(x1, x) 164s a 164s 1 1 164s 2 2 164s 3 2 164s 4 4 164s > over(x, x1) 164s a 164s 1 1 164s 2 2 164s 3 NA 164s 4 4 164s > over(x1, x, returnList = TRUE) 164s [[1]] 164s a 164s 1 1 164s 164s [[2]] 164s a 164s 2 2 164s 164s [[3]] 164s a 164s 2 2 164s 164s [[4]] 164s a 164s 4 4 164s 164s > over(x, x1, returnList = TRUE) 164s [[1]] 164s a 164s 1 1 164s 164s [[2]] 164s a 164s 2 2 164s 4 4 164s 164s [[3]] 164s [1] a 164s <0 rows> (or 0-length row.names) 164s 164s [[4]] 164s a 164s 4 4 164s 164s > 164s BEGIN TEST raster.R 164s 164s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 164s Copyright (C) 2024 The R Foundation for Statistical Computing 164s Platform: x86_64-pc-linux-gnu 164s 164s R is free software and comes with ABSOLUTELY NO WARRANTY. 164s You are welcome to redistribute it under certain conditions. 164s Type 'license()' or 'licence()' for distribution details. 164s 164s R is a collaborative project with many contributors. 164s Type 'contributors()' for more information and 164s 'citation()' on how to cite R or R packages in publications. 164s 164s Type 'demo()' for some demos, 'help()' for on-line help, or 164s 'help.start()' for an HTML browser interface to help. 164s Type 'q()' to quit R. 164s 164s > library(spacetime) 165s > if (require(raster, quietly = TRUE)) { 165s + x <- brick(system.file("external/rlogo.grd", package="raster")) 165s + x <- setZ(x, as.Date(1:nlayers(x), origin = "1970-01-01")) 165s + stplot(x) 165s + } 166s code for methods in class “Rcpp_SpatCategories” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatCategories” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatDataFrame” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatDataFrame” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatExtent” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatExtent” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatFactor” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatFactor” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatGraph” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatGraph” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatMessages” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatMessages” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatOptions” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatOptions” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatRaster” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatRaster” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatRasterCollection” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatRasterCollection” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatRasterStack” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatRasterStack” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatSRS” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatSRS” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatTime_v” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatTime_v” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatVector” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatVector” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatVectorCollection” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatVectorCollection” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatVectorProxy” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 166s code for methods in class “Rcpp_SpatVectorProxy” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 167s code for methods in class “Rcpp_SpExtent” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 167s code for methods in class “Rcpp_SpExtent” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 167s code for methods in class “Rcpp_SpPoly” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 168s code for methods in class “Rcpp_SpPoly” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 168s code for methods in class “Rcpp_SpPolyPart” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 168s code for methods in class “Rcpp_SpPolyPart” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 168s code for methods in class “Rcpp_SpPolygons” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 168s code for methods in class “Rcpp_SpPolygons” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) 168s > 168s BEGIN TEST rw.R 168s 168s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 168s Copyright (C) 2024 The R Foundation for Statistical Computing 168s Platform: x86_64-pc-linux-gnu 168s 168s R is free software and comes with ABSOLUTELY NO WARRANTY. 168s You are welcome to redistribute it under certain conditions. 168s Type 'license()' or 'licence()' for distribution details. 168s 168s R is a collaborative project with many contributors. 168s Type 'contributors()' for more information and 168s 'citation()' on how to cite R or R packages in publications. 168s 168s Type 'demo()' for some demos, 'help()' for on-line help, or 168s 'help.start()' for an HTML browser interface to help. 168s Type 'q()' to quit R. 168s 169s > suppressPackageStartupMessages(library(sp)) 169s > suppressPackageStartupMessages(library(spacetime)) 169s > 169s > m = 3# nr of trajectories 169s > n = 100 # length of each 169s > l = vector("list", m) 169s > t0 = as.POSIXct("2013-05-05",tz="GMT") 169s > set.seed(1331) 169s > for (i in 1:m) { 169s + x = cumsum(rnorm(n)) 169s + y = cumsum(rnorm(n)) 169s + sp = SpatialPoints(cbind(x,y)) 169s + #t = t0 + (0:(n-1) + (i-1)*n) * 60 169s + t = t0 + (0:(n-1) + (i-1)*n/2) * 60 169s + l[[i]] = STI(sp, t) 169s + } 169s > stt= STT(l) 169s > sttdf = STTDF(stt, data.frame(attr = rnorm(n*m), id = paste("ID", rep(1:m, each=n)))) 169s > x = as(stt, "STI") 169s > stplot(sttdf, col=1:m, scales=list(draw=TRUE)) 169s > stplot(sttdf, by = "id") 169s > stplot(sttdf[1]) 169s > stplot(sttdf[1]) 169s > 169s > p = Polygon(cbind(x=c(-20,-15,-15,-20,-20),y=c(10,10,15,15,10))) 169s > pol=SpatialPolygons(list(Polygons(list(p), "ID"))) 169s > #if (require(rgeos, quietly = TRUE)) { 169s > # stplot(sttdf[pol]) 169s > # names(sttdf[pol]@traj) 169s > # stplot(sttdf[1:2],col=1:2) 169s > # stplot(sttdf[,t0]) 169s > # stplot(sttdf[,"2013"]) 169s > # stplot(sttdf[pol,"2013"]) 169s > # is.null(sttdf[pol,t0]) 169s > #} 169s > 169s BEGIN TEST stconstruct.R 169s 169s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 169s Copyright (C) 2024 The R Foundation for Statistical Computing 169s Platform: x86_64-pc-linux-gnu 169s 169s R is free software and comes with ABSOLUTELY NO WARRANTY. 169s You are welcome to redistribute it under certain conditions. 169s Type 'license()' or 'licence()' for distribution details. 169s 170s R is a collaborative project with many contributors. 170s Type 'contributors()' for more information and 170s 'citation()' on how to cite R or R packages in publications. 170s 170s Type 'demo()' for some demos, 'help()' for on-line help, or 170s 'help.start()' for an HTML browser interface to help. 170s Type 'q()' to quit R. 170s 170s > suppressPackageStartupMessages(library(sp)) 170s > suppressPackageStartupMessages(library(spacetime)) 170s > suppressPackageStartupMessages(library(xts)) 170s > 170s > # example 0: construction with STFDF: 170s > 170s > ## IGNORE_RDIFF_BEGIN 170s > if (require(maps, quietly = TRUE)) { 170s + states.m = map('state', plot=FALSE, fill=TRUE) 170s + IDs <- sapply(strsplit(states.m$names, ":"), function(x) x[1]) 170s + 170s + if (require(sf, quietly = TRUE)) { 170s + sta = st_as_sf(states.m) 170s + row.names(sta) = unique(IDs) 170s + states = geometry(as(sta, "Spatial")) 170s + 170s + if (require(plm, quietly = TRUE)) { 170s + data(Produc) 170s + 170s + yrs = 1970:1986 170s + time = xts(1:17, as.POSIXct(paste(yrs, "-01-01", sep=""), tz = "GMT")) 170s + # deselect District of Columbia, polygon 8, which is not present in Produc: 170s + Produc.st = STFDF(states[-8], time, Produc[(order(Produc[,2], Produc[,1])),]) 170s + #stplot(Produc.st[,,"unemp"], yrs) 170s + 170s + # example 1: st from long table, with states as Spatial object: 170s + # use Date format for time: 170s + Produc$time = as.Date(paste(yrs, "01", "01", sep = "-")) 170s + xy = coordinates(states[-8]) 170s + Produc$x = xy[,1] 170s + Produc$y = xy[,2] 170s + #using stConstruct, use polygon centroids for location: 170s + x = stConstruct(Produc, c("x", "y"), "time") 170s + class(x) 170s + stplot(x[,,"unemp"]) 170s + 170s + # alternatively, pass states: 170s + Produc$state = gsub("TENNESSE", "TENNESSEE", Produc$state) 170s + Produc$State = gsub("_", " ", tolower(Produc$state)) 170s + x = stConstruct(Produc, "State", "time", states[-8]) 170s + class(x) 170s + #stplot(x[,,"unemp"], yrs) 170s + 170s + if (require(sf, quietly = TRUE)) { 170s + # stConstruct multivariable, time-wide 170s + fname = system.file("shape/nc.shp", package="sf")[1] 170s + nc = as(read_sf(fname), "Spatial") 170s + timesList = list( 170s + BIR=c("BIR74", "BIR79"), 170s + NWBIR=c("NWBIR74", "NWBIR79"), 170s + SID=c("SID74", "SID79") 170s + ) 170s + t = xts(1:2, as.Date(c("1974-01-01","1979-01-01"))) 170s + nc.st = stConstruct(as(nc, "data.frame"), geometry(nc), timesList, 170s + TimeObj = t) 170s + } 170s + }}} 170s Linking to GEOS 3.12.2, GDAL 3.9.1, PROJ 9.4.0; sf_use_s2() is TRUE 170s WARNING: different compile-time and runtime versions for GEOS found: 170s Linked against: 3.12.2-CAPI-1.18.2 compiled against: 3.12.1-CAPI-1.18.1 170s It is probably a good idea to reinstall sf (and maybe lwgeom too) 171s Error in process_cpl_read_ogr(x, quiet, check_ring_dir = check_ring_dir, : 171s package tibble not available: install first? 171s Calls: as ... st_read -> st_read.character -> process_cpl_read_ogr 171s Execution halted 171s autopkgtest [16:07:37]: test run-unit-test: -----------------------] 172s autopkgtest [16:07:38]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 172s run-unit-test FAIL non-zero exit status 1 172s autopkgtest [16:07:38]: test pkg-r-autopkgtest: preparing testbed 236s autopkgtest [16:08:42]: testbed dpkg architecture: amd64 236s autopkgtest [16:08:42]: testbed apt version: 2.9.8 236s autopkgtest [16:08:42]: @@@@@@@@@@@@@@@@@@@@ test bed setup 237s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 238s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [998 kB] 238s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [104 kB] 238s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB] 238s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 238s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [156 kB] 238s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [106 kB] 238s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [32.6 kB] 238s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [327 kB] 238s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [748 kB] 239s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [37.7 kB] 239s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [13.0 kB] 239s Fetched 2618 kB in 2s (1732 kB/s) 239s Reading package lists... 241s Reading package lists... 241s Building dependency tree... 241s Reading state information... 242s Calculating upgrade... 242s The following NEW packages will be installed: 242s systemd-cryptsetup 242s The following packages will be upgraded: 242s base-passwd bash-completion libattr1 libbpf1 libbsd0 libbytesize-common 242s libbytesize1 libdrm-common libdrm2 libjson-glib-1.0-0 242s libjson-glib-1.0-common libmaxminddb0 libmnl0 libnghttp2-14 libnspr4 242s libnss-systemd libpam-systemd libpython3.12-minimal libpython3.12-stdlib 242s libpython3.12t64 libsystemd-shared libsystemd0 libudev1 libudisks2-0 242s liburcu8t64 linux-firmware openssh-client openssh-server openssh-sftp-server 242s pci.ids python3-gi python3-idna python3-jsonpatch python3-lazr.restfulclient 242s python3-urllib3 python3-wadllib python3.12 python3.12-gdbm 242s python3.12-minimal systemd systemd-resolved systemd-sysv systemd-timesyncd 242s udev udisks2 usbutils 242s 46 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 242s Need to get 558 MB of archives. 242s After this operation, 29.4 MB of additional disk space will be used. 242s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 base-passwd amd64 3.6.5 [53.4 kB] 242s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.12t64 amd64 3.12.7-2 [2372 kB] 243s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12 amd64 3.12.7-2 [661 kB] 244s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.12-stdlib amd64 3.12.7-2 [2079 kB] 244s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12-minimal amd64 3.12.7-2 [2345 kB] 245s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.12-minimal amd64 3.12.7-2 [836 kB] 246s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libnss-systemd amd64 256.5-2ubuntu4 [191 kB] 246s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-timesyncd amd64 256.5-2ubuntu4 [40.8 kB] 246s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-resolved amd64 256.5-2ubuntu4 [339 kB] 246s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd-shared amd64 256.5-2ubuntu4 [2289 kB] 247s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd0 amd64 256.5-2ubuntu4 [511 kB] 247s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-sysv amd64 256.5-2ubuntu4 [11.9 kB] 247s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-systemd amd64 256.5-2ubuntu4 [288 kB] 247s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd amd64 256.5-2ubuntu4 [3587 kB] 248s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 udev amd64 256.5-2ubuntu4 [2081 kB] 249s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libudev1 amd64 256.5-2ubuntu4 [209 kB] 249s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-sftp-server amd64 1:9.7p1-7ubuntu5 [40.8 kB] 249s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-server amd64 1:9.7p1-7ubuntu5 [583 kB] 249s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-client amd64 1:9.7p1-7ubuntu5 [1027 kB] 249s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libattr1 amd64 1:2.5.2-2 [12.1 kB] 249s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libbsd0 amd64 0.12.2-2 [49.9 kB] 249s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libbpf1 amd64 1:1.4.6-1 [184 kB] 249s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libmnl0 amd64 1.0.5-3 [12.6 kB] 249s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-3 [250 kB] 249s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 bash-completion all 1:2.14.0-2 [210 kB] 249s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libdrm-common all 2.4.123-1 [8436 B] 249s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libdrm2 amd64 2.4.123-1 [43.7 kB] 249s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libmaxminddb0 amd64 1.11.0-1 [19.9 kB] 249s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libnghttp2-14 amd64 1.64.0-1 [80.7 kB] 249s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 liburcu8t64 amd64 0.14.1-1 [68.6 kB] 250s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 pci.ids all 0.0~2024.10.24-1 [279 kB] 250s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12-gdbm amd64 3.12.7-2 [30.4 kB] 250s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 usbutils amd64 1:018-1 [84.5 kB] 250s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libbytesize1 amd64 2.11-1ubuntu1 [14.0 kB] 250s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libbytesize-common all 2.11-1ubuntu1 [3584 B] 250s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libjson-glib-1.0-common all 1.10.0+ds-2 [5502 B] 250s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libjson-glib-1.0-0 amd64 1.10.0+ds-2 [72.8 kB] 250s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libnspr4 amd64 2:4.35-1.1ubuntu2 [118 kB] 250s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 udisks2 amd64 2.10.1-11ubuntu1 [326 kB] 250s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libudisks2-0 amd64 2.10.1-11ubuntu1 [176 kB] 250s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-firmware amd64 20241108.git3bbb13a7-0ubuntu1 [536 MB] 285s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-idna all 3.8-2 [47.0 kB] 285s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jsonpatch all 1.32-4 [12.2 kB] 285s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-wadllib all 2.0.0-1 [36.7 kB] 285s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lazr.restfulclient all 0.14.6-2 [50.9 kB] 285s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-urllib3 all 2.0.7-2ubuntu0.1 [93.1 kB] 285s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-cryptsetup amd64 256.5-2ubuntu4 [120 kB] 285s Preconfiguring packages ... 285s Fetched 558 MB in 43s (13.0 MB/s) 285s (Reading database ... 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python3.12-gdbm (3.12.7-2) over (3.12.7-1) ... 288s Preparing to unpack .../11-usbutils_1%3a018-1_amd64.deb ... 288s Unpacking usbutils (1:018-1) over (1:017-3build1) ... 288s Preparing to unpack .../12-libbytesize1_2.11-1ubuntu1_amd64.deb ... 288s Unpacking libbytesize1:amd64 (2.11-1ubuntu1) over (2.10-1ubuntu2) ... 288s Preparing to unpack .../13-libbytesize-common_2.11-1ubuntu1_all.deb ... 288s Unpacking libbytesize-common (2.11-1ubuntu1) over (2.10-1ubuntu2) ... 288s Preparing to unpack .../14-libjson-glib-1.0-common_1.10.0+ds-2_all.deb ... 288s Unpacking libjson-glib-1.0-common (1.10.0+ds-2) over (1.8.0-2build2) ... 289s Preparing to unpack .../15-libjson-glib-1.0-0_1.10.0+ds-2_amd64.deb ... 289s Unpacking libjson-glib-1.0-0:amd64 (1.10.0+ds-2) over (1.8.0-2build2) ... 289s Preparing to unpack .../16-libnspr4_2%3a4.35-1.1ubuntu2_amd64.deb ... 289s Unpacking libnspr4:amd64 (2:4.35-1.1ubuntu2) over (2:4.35-1.1ubuntu1) ... 289s Preparing to unpack .../17-udisks2_2.10.1-11ubuntu1_amd64.deb ... 289s Unpacking udisks2 (2.10.1-11ubuntu1) over (2.10.1-9ubuntu2) ... 289s Preparing to unpack .../18-libudisks2-0_2.10.1-11ubuntu1_amd64.deb ... 289s Unpacking libudisks2-0:amd64 (2.10.1-11ubuntu1) over (2.10.1-9ubuntu2) ... 289s Preparing to unpack .../19-linux-firmware_20241108.git3bbb13a7-0ubuntu1_amd64.deb ... 289s Unpacking linux-firmware (20241108.git3bbb13a7-0ubuntu1) over (20240913.gita34e7a5f-0ubuntu2) ... 291s Preparing to unpack .../20-python3-idna_3.8-2_all.deb ... 291s Unpacking python3-idna (3.8-2) over (3.6-2.1) ... 291s Preparing to unpack .../21-python3-jsonpatch_1.32-4_all.deb ... 291s Unpacking python3-jsonpatch (1.32-4) over (1.32-3) ... 291s Preparing to unpack .../22-python3-wadllib_2.0.0-1_all.deb ... 291s Unpacking python3-wadllib (2.0.0-1) over (1.3.6-5) ... 291s Preparing to unpack .../23-python3-lazr.restfulclient_0.14.6-2_all.deb ... 292s Unpacking python3-lazr.restfulclient (0.14.6-2) over (0.14.6-1) ... 292s Preparing to unpack .../24-python3-urllib3_2.0.7-2ubuntu0.1_all.deb ... 292s Unpacking python3-urllib3 (2.0.7-2ubuntu0.1) over (2.0.7-2) ... 292s Selecting previously unselected package systemd-cryptsetup. 292s Preparing to unpack .../25-systemd-cryptsetup_256.5-2ubuntu4_amd64.deb ... 292s Unpacking systemd-cryptsetup (256.5-2ubuntu4) ... 292s Setting up liburcu8t64:amd64 (0.14.1-1) ... 292s Setting up pci.ids (0.0~2024.10.24-1) ... 292s Setting up linux-firmware (20241108.git3bbb13a7-0ubuntu1) ... 292s Setting up openssh-client (1:9.7p1-7ubuntu5) ... 292s Setting up libmaxminddb0:amd64 (1.11.0-1) ... 292s Setting up python3.12-gdbm (3.12.7-2) ... 292s Setting up python3-jsonpatch (1.32-4) ... 292s Setting up libpython3.12-minimal:amd64 (3.12.7-2) ... 292s Setting up libnghttp2-14:amd64 (1.64.0-1) ... 292s Setting up usbutils (1:018-1) ... 292s Setting up libnspr4:amd64 (2:4.35-1.1ubuntu2) ... 292s Setting up bash-completion (1:2.14.0-2) ... 292s Setting up python3-wadllib (2.0.0-1) ... 292s Setting up python3-gi (3.50.0-3) ... 292s Setting up libbytesize-common (2.11-1ubuntu1) ... 292s Setting up libmnl0:amd64 (1.0.5-3) ... 292s Setting up python3-idna (3.8-2) ... 292s Setting up libsystemd-shared:amd64 (256.5-2ubuntu4) ... 292s Setting up python3-urllib3 (2.0.7-2ubuntu0.1) ... 292s Setting up libjson-glib-1.0-common (1.10.0+ds-2) ... 292s Setting up libbytesize1:amd64 (2.11-1ubuntu1) ... 292s Setting up python3-lazr.restfulclient (0.14.6-2) ... 292s Setting up libdrm-common (2.4.123-1) ... 292s Setting up libbpf1:amd64 (1:1.4.6-1) ... 292s Setting up libudisks2-0:amd64 (2.10.1-11ubuntu1) ... 292s Setting up python3.12-minimal (3.12.7-2) ... 293s Setting up openssh-sftp-server (1:9.7p1-7ubuntu5) ... 293s Setting up libpython3.12-stdlib:amd64 (3.12.7-2) ... 293s Setting up openssh-server (1:9.7p1-7ubuntu5) ... 294s Setting up python3.12 (3.12.7-2) ... 295s Setting up systemd (256.5-2ubuntu4) ... 295s /usr/lib/tmpfiles.d/legacy.conf:13: Duplicate line for path "/run/lock", ignoring. 295s Created symlink '/run/systemd/system/tmp.mount' → '/dev/null'. 295s /usr/lib/tmpfiles.d/legacy.conf:13: Duplicate line for path "/run/lock", ignoring. 296s Setting up libjson-glib-1.0-0:amd64 (1.10.0+ds-2) ... 296s Setting up libpython3.12t64:amd64 (3.12.7-2) ... 296s Setting up systemd-cryptsetup (256.5-2ubuntu4) ... 296s Setting up systemd-timesyncd (256.5-2ubuntu4) ... 296s systemd-time-wait-sync.service is a disabled or a static unit not running, not starting it. 296s Setting up udev (256.5-2ubuntu4) ... 297s Setting up libdrm2:amd64 (2.4.123-1) ... 297s Setting up systemd-resolved (256.5-2ubuntu4) ... 297s Setting up udisks2 (2.10.1-11ubuntu1) ... 298s Setting up systemd-sysv (256.5-2ubuntu4) ... 298s Setting up libnss-systemd:amd64 (256.5-2ubuntu4) ... 298s Setting up libpam-systemd:amd64 (256.5-2ubuntu4) ... 298s Processing triggers for libc-bin (2.40-1ubuntu3) ... 298s Processing triggers for ufw (0.36.2-8) ... 298s Processing triggers for man-db (2.12.1-3) ... 299s Processing triggers for dbus (1.14.10-4ubuntu5) ... 299s Processing triggers for shared-mime-info (2.4-5) ... 299s Processing triggers for initramfs-tools (0.142ubuntu34) ... 299s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic 299s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 307s Reading package lists... 308s Building dependency tree... 308s Reading state information... 308s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 308s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 308s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 309s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 309s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 309s Reading package lists... 309s Reading package lists... 310s Building dependency tree... 310s Reading state information... 310s Calculating upgrade... 310s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 310s Reading package lists... 310s Building dependency tree... 310s Reading state information... 310s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 310s autopkgtest [16:09:56]: rebooting testbed after setup commands that affected boot 314s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 332s Reading package lists... 332s Building dependency tree... 332s Reading state information... 332s Starting pkgProblemResolver with broken count: 0 333s Starting 2 pkgProblemResolver with broken count: 0 333s Done 333s The following additional packages will be installed: 333s build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu 333s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 333s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-14 333s g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 333s gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gdal-data gdal-plugins gfortran 333s gfortran-14 gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu 333s icu-devtools javascript-common libaec0 libaom3 libarmadillo14 libarpack2t64 333s libasan8 libblas-dev libblas3 libblosc1 libbz2-dev libcairo2 libcc1-0 333s libcfitsio10t64 libdatrie1 libde265-0 libdeflate-dev libdeflate0 333s libfontconfig1 libfreexl1 libfyba0t64 libgcc-14-dev libgdal35 libgeos-c1t64 333s libgeos3.12.2 libgeotiff5 libgfortran-14-dev libgfortran5 libgif7 libgomp1 333s libgraphite2-3 libharfbuzz0b libhdf4-0-alt libhdf5-103-1t64 333s libhdf5-hl-100t64 libheif-plugin-aomdec libheif-plugin-libde265 libheif1 333s libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev 333s libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap 333s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 333s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 333s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 333s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 333s libkmlbase1t64 libkmldom1t64 libkmlengine1t64 liblapack-dev liblapack3 333s liblcms2-2 liblerc4 liblsan0 libltdl7 liblua5.4-0 liblzma-dev libminizip1t64 333s libmpc3 libmysqlclient21 libncurses-dev libnetcdf19t64 libodbc2 libodbcinst2 333s libogdi4.1 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 333s libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 333s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpoppler140 libpq5 333s libproj25 libqhull-r8.0 libquadmath0 libreadline-dev librttopo1 libsharpyuv0 333s libsm6 libsnappy1v5 libspatialite8t64 libstdc++-14-dev libsuperlu6 libsz2 333s libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 333s libubsan1 libudunits2-0 libudunits2-data liburiparser1 libwebp7 333s libxcb-render0 libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1 333s libxt6t64 littler mysql-common node-bootstrap-sass node-html5shiv 333s node-normalize.css pandoc pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin 333s proj-data r-base-core r-base-dev r-cran-base64enc r-cran-bdsmatrix 333s r-cran-bslib r-cran-cachem r-cran-class r-cran-classint r-cran-cli 333s r-cran-collapse r-cran-commonmark r-cran-crayon r-cran-dbi r-cran-digest 333s r-cran-e1071 r-cran-evaluate r-cran-fastmap r-cran-fontawesome 333s r-cran-foreign r-cran-formula r-cran-fs r-cran-generics r-cran-glue 333s r-cran-highr r-cran-htmltools r-cran-httpuv r-cran-intervals r-cran-isocodes 333s r-cran-jquerylib r-cran-jsonlite r-cran-kernsmooth r-cran-knitr r-cran-later 333s r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-lmtest r-cran-magrittr 333s r-cran-mapdata r-cran-maps r-cran-markdown r-cran-mass r-cran-maxlik 333s r-cran-memoise r-cran-mime r-cran-misctools r-cran-nlme r-cran-pkgkitten 333s r-cran-plm r-cran-promises r-cran-proxy r-cran-r6 r-cran-rappdirs 333s r-cran-raster r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp r-cran-rdpack 333s r-cran-rlang r-cran-rmarkdown r-cran-rpostgresql r-cran-s2 r-cran-sandwich 333s r-cran-sass r-cran-sf r-cran-shiny r-cran-sourcetools r-cran-sp 333s r-cran-spacetime r-cran-terra r-cran-tinytex r-cran-units r-cran-withr 333s r-cran-wk r-cran-xfun r-cran-xtable r-cran-xts r-cran-yaml r-cran-zoo 333s unixodbc-common unzip x11-common xdg-utils zip zlib1g-dev 333s Suggested packages: 333s cpp-doc gcc-14-locales cpp-14-doc debtags g++-multilib g++-14-multilib 333s gcc-14-doc gcc-multilib manpages-dev autoconf automake libtool flex bison 333s gdb gcc-doc gcc-14-multilib gdb-x86-64-linux-gnu gfortran-multilib 333s gfortran-doc gfortran-14-multilib gfortran-14-doc libcoarrays-dev apache2 333s | lighttpd | httpd liblapack-doc geotiff-bin gdal-bin libgeotiff-epsg 333s libhdf4-alt-dev hdf4-tools libheif-plugin-x265 libheif-plugin-ffmpegdec 333s libheif-plugin-jpegdec libheif-plugin-jpegenc libheif-plugin-j2kdec 333s libheif-plugin-j2kenc libheif-plugin-kvazaar libheif-plugin-rav1e 333s libheif-plugin-svtenc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras 333s fonts-stix libjs-mathjax-doc liblcms2-utils liblzma-doc ncurses-doc 333s odbc-postgresql tdsodbc ogdi-bin proj-bin readline-doc libstdc++-14-doc 333s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 333s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 333s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 333s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base 333s texlive-plain-generic texlive-fonts-recommended texlive-fonts-extra 333s texlive-extra-utils texinfo r-cran-rstudioapi r-cran-rmysql r-cran-covr 333s r-cran-tibble r-cran-testthat r-cran-getopt r-cran-mapproj r-cran-httr 333s r-cran-roxygen2 r-cran-inline r-cran-survival 333s Recommended packages: 333s bzip2-doc proj-bin libheif-plugin-aomenc node-jquery libpng-tools 333s poppler-data r-recommended r-doc-html r-cran-curl r-cran-future 333s r-cran-ggplot2 r-cran-testthat r-cran-thematic r-cran-spdata r-cran-tinytest 333s r-cran-callr r-cran-covr r-cran-htmlwidgets r-cran-mockery r-cran-processx 333s r-cran-ps r-cran-rprojroot r-cran-rstudioapi r-cran-tibble r-cran-whoami 333s r-cran-data.table r-cran-rcpparmadillo r-cran-rcppeigen r-cran-dplyr 333s r-cran-scales r-cran-microbenchmark r-cran-xml2 r-cran-rsvg r-cran-pillar 333s r-cran-spelling r-cran-vctrs r-cran-pkgload r-cran-rsqlite r-cran-waldo 333s r-cran-testit r-cran-cairo r-cran-ragg r-cran-httr r-cran-r.rsp 333s r-cran-codetools r-cran-formatr r-cran-gridsvg r-cran-jpeg r-cran-magick 333s r-cran-png r-cran-reticulate r-cran-rgl r-cran-tikzdevice r-cran-webshot 333s r-cran-svglite node-highlight.js r-cran-lintr r-cran-tidyverse r-cran-rcurl 333s r-cran-clue r-cran-plot3d r-cran-runit r-cran-aer r-cran-car r-cran-spdep 333s r-cran-statmod r-cran-urca r-cran-bookdown r-cran-purrr r-cran-cba 333s r-cran-ncdf4 r-cran-igraph r-cran-gstat r-cran-fields r-cran-exactextractr 333s r-cran-gbrd r-cran-usethis r-cran-dygraphs r-cran-rsconnect r-cran-downlit 333s r-cran-bit64 r-cran-blob r-cran-nanoarrow r-cran-lwgeom r-cran-matrix 333s r-cran-pbapply r-cran-spatstat r-cran-spatstat.geom r-cran-spatstat.random 333s r-cran-spatstat.linnet r-cran-spatstat.utils r-cran-stars r-cran-tidyr 333s r-cran-tidyselect r-cran-dt r-cran-deldir r-cran-sftime r-cran-xml 333s r-cran-vdiffr r-cran-readr r-cran-remotes r-cran-renv r-cran-timeseries 333s r-cran-timedate r-cran-tseries r-cran-chron libfile-mimeinfo-perl 333s libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils 333s The following NEW packages will be installed: 333s autopkgtest-satdep build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu 333s cpp-x86-64-linux-gnu dctrl-tools fontconfig fontconfig-config 333s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 333s fonts-glyphicons-halflings fonts-mathjax g++ g++-14 g++-14-x86-64-linux-gnu 333s g++-x86-64-linux-gnu gcc gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu 333s gdal-data gdal-plugins gfortran gfortran-14 gfortran-14-x86-64-linux-gnu 333s gfortran-x86-64-linux-gnu icu-devtools javascript-common libaec0 libaom3 333s libarmadillo14 libarpack2t64 libasan8 libblas-dev libblas3 libblosc1 333s libbz2-dev libcairo2 libcc1-0 libcfitsio10t64 libdatrie1 libde265-0 333s libdeflate-dev libdeflate0 libfontconfig1 libfreexl1 libfyba0t64 333s libgcc-14-dev libgdal35 libgeos-c1t64 libgeos3.12.2 libgeotiff5 333s libgfortran-14-dev libgfortran5 libgif7 libgomp1 libgraphite2-3 333s libharfbuzz0b libhdf4-0-alt libhdf5-103-1t64 libhdf5-hl-100t64 333s libheif-plugin-aomdec libheif-plugin-libde265 libheif1 libhwasan0 libice6 333s libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 333s libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 333s libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 333s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 333s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 333s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 333s libkmlbase1t64 libkmldom1t64 libkmlengine1t64 liblapack-dev liblapack3 333s liblcms2-2 liblerc4 liblsan0 libltdl7 liblua5.4-0 liblzma-dev libminizip1t64 333s libmpc3 libmysqlclient21 libncurses-dev libnetcdf19t64 libodbc2 libodbcinst2 333s libogdi4.1 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 333s libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 333s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpoppler140 libpq5 333s libproj25 libqhull-r8.0 libquadmath0 libreadline-dev librttopo1 libsharpyuv0 333s libsm6 libsnappy1v5 libspatialite8t64 libstdc++-14-dev libsuperlu6 libsz2 333s libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 333s libubsan1 libudunits2-0 libudunits2-data liburiparser1 libwebp7 333s libxcb-render0 libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1 333s libxt6t64 littler mysql-common node-bootstrap-sass node-html5shiv 333s node-normalize.css pandoc pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin 333s proj-data r-base-core r-base-dev r-cran-base64enc r-cran-bdsmatrix 333s r-cran-bslib r-cran-cachem r-cran-class r-cran-classint r-cran-cli 333s r-cran-collapse r-cran-commonmark r-cran-crayon r-cran-dbi r-cran-digest 333s r-cran-e1071 r-cran-evaluate r-cran-fastmap r-cran-fontawesome 333s r-cran-foreign r-cran-formula r-cran-fs r-cran-generics r-cran-glue 333s r-cran-highr r-cran-htmltools r-cran-httpuv r-cran-intervals r-cran-isocodes 333s r-cran-jquerylib r-cran-jsonlite r-cran-kernsmooth r-cran-knitr r-cran-later 333s r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-lmtest r-cran-magrittr 333s r-cran-mapdata r-cran-maps r-cran-markdown r-cran-mass r-cran-maxlik 333s r-cran-memoise r-cran-mime r-cran-misctools r-cran-nlme r-cran-pkgkitten 333s r-cran-plm r-cran-promises r-cran-proxy r-cran-r6 r-cran-rappdirs 333s r-cran-raster r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp r-cran-rdpack 333s r-cran-rlang r-cran-rmarkdown r-cran-rpostgresql r-cran-s2 r-cran-sandwich 333s r-cran-sass r-cran-sf r-cran-shiny r-cran-sourcetools r-cran-sp 333s r-cran-spacetime r-cran-terra r-cran-tinytex r-cran-units r-cran-withr 333s r-cran-wk r-cran-xfun r-cran-xtable r-cran-xts r-cran-yaml r-cran-zoo 333s unixodbc-common unzip x11-common xdg-utils zip zlib1g-dev 333s 0 upgraded, 255 newly installed, 0 to remove and 0 not upgraded. 333s Need to get 300 MB/300 MB of archives. 333s After this operation, 973 MB of additional disk space will be used. 333s Get:1 /tmp/autopkgtest.x1HKE3/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [792 B] 333s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 334s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 334s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-7ubuntu1 [11.9 MB] 340s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-7ubuntu1 [1026 B] 340s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [5452 B] 340s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.1.0-2ubuntu1 [22.4 kB] 340s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 14.2.0-7ubuntu1 [47.6 kB] 340s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-7ubuntu1 [148 kB] 340s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 14.2.0-7ubuntu1 [29.1 kB] 340s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 14.2.0-7ubuntu1 [2998 kB] 341s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 14.2.0-7ubuntu1 [1316 kB] 341s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 14.2.0-7ubuntu1 [2733 kB] 341s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 14.2.0-7ubuntu1 [1177 kB] 342s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 14.2.0-7ubuntu1 [1634 kB] 342s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 14.2.0-7ubuntu1 [153 kB] 342s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-7ubuntu1 [2814 kB] 342s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-7ubuntu1 [23.4 MB] 343s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-7ubuntu1 [526 kB] 343s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1214 B] 343s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.1.0-2ubuntu1 [5000 B] 343s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-7ubuntu1 [2503 kB] 344s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-7ubuntu1 [13.4 MB] 344s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-7ubuntu1 [19.8 kB] 344s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [966 B] 344s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.1.0-2ubuntu1 [1100 B] 344s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 344s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 dctrl-tools amd64 2.24-3build3 [106 kB] 344s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 344s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 344s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB] 344s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB] 344s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB] 344s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 344s Get:35 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 344s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 344s Get:37 http://ftpmaster.internal/ubuntu plucky/universe amd64 gdal-data all 3.9.1+dfsg-1build2 [269 kB] 344s Get:38 http://ftpmaster.internal/ubuntu plucky/universe amd64 gdal-plugins amd64 3.9.1+dfsg-1build2 [25.3 kB] 344s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-7ubuntu1 [909 kB] 344s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran-14-dev amd64 14.2.0-7ubuntu1 [965 kB] 344s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-7ubuntu1 [12.6 MB] 345s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14 amd64 14.2.0-7ubuntu1 [11.6 kB] 345s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1022 B] 345s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran amd64 4:14.1.0-2ubuntu1 [1172 B] 345s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 icu-devtools amd64 74.2-1ubuntu4 [213 kB] 345s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 11+nmu1 [5936 B] 345s Get:47 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 345s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libaom3 amd64 3.11.0~rc1-1 [2762 kB] 345s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-3build2 [247 kB] 345s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-3build2 [2668 kB] 345s Get:51 http://ftpmaster.internal/ubuntu plucky/universe amd64 libarpack2t64 amd64 3.9.1-1.1ubuntu1 [107 kB] 345s Get:52 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsuperlu6 amd64 6.0.1+dfsg1-1build3 [182 kB] 345s Get:53 http://ftpmaster.internal/ubuntu plucky/universe amd64 libarmadillo14 amd64 1:14.0.1+dfsg-2 [105 kB] 345s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas-dev amd64 3.12.0-3build2 [172 kB] 345s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libsnappy1v5 amd64 1.2.1-1 [30.4 kB] 345s Get:56 http://ftpmaster.internal/ubuntu plucky/universe amd64 libblosc1 amd64 1.21.5+ds-1build1 [36.2 kB] 345s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libbz2-dev amd64 1.0.8-6 [33.8 kB] 345s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-2 [427 kB] 345s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 345s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 345s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 345s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 345s Get:63 http://ftpmaster.internal/ubuntu plucky/universe amd64 libcfitsio10t64 amd64 4.4.1-2 [524 kB] 345s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 345s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libde265-0 amd64 1.0.15-1build4 [168 kB] 345s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.22-1 [64.5 kB] 345s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate-dev amd64 1.22-1 [72.2 kB] 345s Get:68 http://ftpmaster.internal/ubuntu plucky/universe amd64 libfyba0t64 amd64 4.1.1-11build1 [119 kB] 345s Get:69 http://ftpmaster.internal/ubuntu plucky/universe amd64 libminizip1t64 amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [22.9 kB] 345s Get:70 http://ftpmaster.internal/ubuntu plucky/universe amd64 libfreexl1 amd64 2.0.0-1build2 [41.7 kB] 345s Get:71 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeos3.12.2 amd64 3.12.2-1 [849 kB] 345s Get:72 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeos-c1t64 amd64 3.12.2-1 [94.4 kB] 345s Get:73 http://ftpmaster.internal/ubuntu plucky/universe amd64 proj-data all 9.4.1-1 [7892 kB] 346s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 346s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-2ubuntu2 [150 kB] 346s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 346s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-4ubuntu2 [179 kB] 346s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [17.5 kB] 346s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.4.0-0.1 [231 kB] 346s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 346s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 libproj25 amd64 9.4.1-1 [1398 kB] 346s Get:82 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeotiff5 amd64 1.7.3-1 [63.0 kB] 346s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 libgif7 amd64 5.2.2-1ubuntu1 [35.2 kB] 346s Get:84 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 346s Get:85 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf4-0-alt amd64 4.3.0-1 [285 kB] 346s Get:86 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-103-1t64 amd64 1.10.10+repack-4ubuntu3 [1280 kB] 346s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif-plugin-aomdec amd64 1.18.1-2 [11.1 kB] 346s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif-plugin-libde265 amd64 1.18.1-2 [8758 B] 346s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif1 amd64 1.18.1-2 [293 kB] 346s Get:90 http://ftpmaster.internal/ubuntu plucky/universe amd64 liburiparser1 amd64 0.9.8+dfsg-1 [35.9 kB] 346s Get:91 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmlbase1t64 amd64 1.3.0-12build1 [49.9 kB] 346s Get:92 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmldom1t64 amd64 1.3.0-12build1 [156 kB] 346s Get:93 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmlengine1t64 amd64 1.3.0-12build1 [71.4 kB] 346s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 mysql-common all 5.8+1.1.1 [6800 B] 346s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 libmysqlclient21 amd64 8.0.40-1 [1250 kB] 346s Get:96 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-4ubuntu3 [56.6 kB] 346s Get:97 http://ftpmaster.internal/ubuntu plucky/universe amd64 libnetcdf19t64 amd64 1:4.9.2-6ubuntu1 [472 kB] 346s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl7 amd64 2.4.7-7build1 [40.3 kB] 346s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 libodbc2 amd64 2.3.12-1ubuntu1 [158 kB] 346s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 unixodbc-common all 2.3.12-1ubuntu1 [8796 B] 346s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 libodbcinst2 amd64 2.3.12-1ubuntu1 [30.7 kB] 346s Get:102 http://ftpmaster.internal/ubuntu plucky/universe amd64 libogdi4.1 amd64 4.1.1+ds-5 [219 kB] 346s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 libopenjp2-7 amd64 2.5.0-2ubuntu1 [184 kB] 346s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 liblcms2-2 amd64 2.14-2build1 [161 kB] 346s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 libpoppler140 amd64 24.08.0-1 [1168 kB] 347s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libpq5 amd64 17.0-1 [249 kB] 347s Get:107 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqhull-r8.0 amd64 2020.2-6build1 [193 kB] 347s Get:108 http://ftpmaster.internal/ubuntu plucky/universe amd64 librttopo1 amd64 1.1.0-3build2 [191 kB] 347s Get:109 http://ftpmaster.internal/ubuntu plucky/universe amd64 libspatialite8t64 amd64 5.1.0-3build1 [1919 kB] 347s Get:110 http://ftpmaster.internal/ubuntu plucky/universe amd64 libxerces-c3.2t64 amd64 3.2.4+debian-1.3 [917 kB] 347s Get:111 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgdal35 amd64 3.9.1+dfsg-1build2 [9303 kB] 347s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 347s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 9.0.0-1 [487 kB] 347s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 347s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 347s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libicu-dev amd64 74.2-1ubuntu4 [11.9 MB] 348s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8-dev amd64 2.1.5-2ubuntu2 [295 kB] 348s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 348s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 348s Get:120 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 348s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 348s Get:122 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 348s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 348s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 348s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 348s Get:126 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 348s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 348s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 348s Get:129 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 348s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 348s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 348s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 348s Get:133 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 348s Get:134 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack-dev amd64 3.12.0-3build2 [5249 kB] 348s Get:135 http://ftpmaster.internal/ubuntu plucky/main amd64 liblua5.4-0 amd64 5.4.6-3build2 [166 kB] 348s Get:136 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses-dev amd64 6.5-2 [384 kB] 348s Get:137 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 348s Get:138 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 348s Get:139 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.54.0+ds-2 [235 kB] 348s Get:140 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.54.0+ds-2 [49.1 kB] 348s Get:141 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.54.0+ds-2 [28.8 kB] 348s Get:142 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper1 amd64 1.1.29build1 [13.4 kB] 348s Get:143 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 1.1.29build1 [8650 B] 348s Get:144 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.42-4ubuntu3 [214 kB] 348s Get:145 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-32-0 amd64 10.42-4ubuntu3 [201 kB] 348s Get:146 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-posix3 amd64 10.42-4ubuntu3 [6768 B] 348s Get:147 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-dev amd64 10.42-4ubuntu3 [747 kB] 348s Get:148 http://ftpmaster.internal/ubuntu plucky/main amd64 libpkgconf3 amd64 1.8.1-4 [32.3 kB] 348s Get:149 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 348s Get:150 http://ftpmaster.internal/ubuntu plucky/main amd64 libpng-dev amd64 1.6.44-1 [266 kB] 348s Get:151 http://ftpmaster.internal/ubuntu plucky/main amd64 libreadline-dev amd64 8.2-5 [169 kB] 348s Get:152 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 348s Get:153 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.14+dfsg-1build1 [988 kB] 348s Get:154 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 348s Get:155 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 348s Get:156 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.14-1build1 [779 kB] 348s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 libudunits2-data all 2.2.28-7build1 [19.4 kB] 348s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 libudunits2-0 amd64 2.2.28-7build1 [54.1 kB] 348s Get:159 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 348s Get:160 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14 [174 kB] 348s Get:161 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 348s Get:162 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 348s Get:163 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.2-1 [28.9 MB] 349s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-1 [96.0 kB] 349s Get:165 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-1 [2486 B] 349s Get:166 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 349s Get:167 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 349s Get:168 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 349s Get:169 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc-data all 3.1.11.1-3 [78.7 kB] 349s Get:170 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc amd64 3.1.11.1+ds-2 [27.2 MB] 350s Get:171 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma-dev amd64 5.6.2-2 [176 kB] 350s Get:172 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf-bin amd64 1.8.1-4 [21.6 kB] 350s Get:173 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf amd64 1.8.1-4 [16.8 kB] 350s Get:174 http://ftpmaster.internal/ubuntu plucky/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3 [193 kB] 350s Get:175 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-dev all 4.4.2-1 [4340 B] 350s Get:176 http://ftpmaster.internal/ubuntu plucky/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 350s Get:177 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 350s Get:178 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bdsmatrix amd64 1.3-7-1 [299 kB] 350s Get:179 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.4-1 [1708 kB] 350s Get:180 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 350s Get:181 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 350s Get:182 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB] 350s Get:183 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 350s Get:184 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 350s Get:185 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.8.8+dfsg-1 [441 kB] 350s Get:186 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.2-1 [1380 kB] 350s Get:187 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.7.0-1 [154 kB] 350s Get:188 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 350s Get:189 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 350s Get:190 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 350s Get:191 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.4+dfsg-1 [245 kB] 350s Get:192 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB] 350s Get:193 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 350s Get:194 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 350s Get:195 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.7.0+dfsg-1 [4255 kB] 350s Get:196 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mass amd64 7.3-61-1 [1109 kB] 350s Get:197 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-class amd64 7.3-22-2build1 [88.2 kB] 350s Get:198 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB] 350s Get:199 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-e1071 amd64 1.7-16-1 [565 kB] 350s Get:200 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernsmooth amd64 2.23-24-1 [92.9 kB] 350s Get:201 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-classint amd64 0.4-10+dfsg-1 [106 kB] 350s Get:202 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 350s Get:203 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.13-1 [1990 kB] 350s Get:204 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-collapse amd64 2.0.16-1 [3351 kB] 351s Get:205 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.1-1 [131 kB] 351s Get:206 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.2-1 [164 kB] 351s Get:207 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dbi all 1.2.3-1 [853 kB] 351s Get:208 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 0.24.0-1 [93.5 kB] 351s Get:209 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 351s Get:210 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-foreign amd64 0.8.87-1 [245 kB] 351s Get:211 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-formula all 1.2-5-1 [158 kB] 351s Get:212 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB] 351s Get:213 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xfun amd64 0.49+dfsg-1 [545 kB] 351s Get:214 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 351s Get:215 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.3.2+dfsg-1 [123 kB] 351s Get:216 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 351s Get:217 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.0+dfsg-1 [287 kB] 351s Get:218 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 351s Get:219 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-intervals amd64 0.15.4-1 [756 kB] 351s Get:220 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-isocodes all 2024.02.12-1 [312 kB] 351s Get:221 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.8-2 [108 kB] 351s Get:222 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 351s Get:223 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-knitr all 1.47+dfsg-1 [911 kB] 351s Get:224 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 351s Get:225 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-zoo amd64 1.8-12-2 [984 kB] 352s Get:226 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lmtest amd64 0.9.40-1 [396 kB] 352s Get:227 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-maps amd64 3.4.2-1 [2359 kB] 352s Get:228 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mapdata amd64 2.3.1-1 [23.5 MB] 352s Get:229 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-markdown all 1.12+dfsg-2 [179 kB] 352s Get:230 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-misctools all 0.6-28-1 [99.9 kB] 352s Get:231 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sandwich all 3.1-0-1 [1484 kB] 353s Get:232 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-maxlik all 1.5-2.1-1 [1083 kB] 353s Get:233 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nlme amd64 3.1.166-1 [2314 kB] 353s Get:234 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rbibutils amd64 2.3-1 [1023 kB] 353s Get:235 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rdpack all 2.6.1-1 [755 kB] 353s Get:236 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plm all 2.6-4-1 [2161 kB] 353s Get:237 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sp amd64 1:2.1-4+dfsg-1 [1472 kB] 353s Get:238 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-terra amd64 1.7-78-1 [3751 kB] 353s Get:239 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-raster amd64 3.6-30-1 [3145 kB] 353s Get:240 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 353s Get:241 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tinytex all 0.53-1 [145 kB] 353s Get:242 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-modernizr all 3.13.0-0.1 [101 kB] 353s Get:243 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 353s Get:244 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 353s Get:245 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.0+dfsg-1 [228 kB] 353s Get:246 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 353s Get:247 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.8.1.1+dfsg-1 [2873 kB] 353s Get:248 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-rmarkdown all 2.28+dfsg-1 [1501 kB] 353s Get:249 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rpostgresql amd64 0.7-7+dfsg-1 [365 kB] 353s Get:250 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-wk amd64 0.9.4-1 [1791 kB] 354s Get:251 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-s2 amd64 1.1.6-1build2 [1981 kB] 354s Get:252 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-units amd64 0.8-5+dfsg-1 [275 kB] 354s Get:253 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sf amd64 1.0-16+dfsg-1build1 [3064 kB] 354s Get:254 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xts amd64 0.14.0-1 [760 kB] 354s Get:255 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-spacetime all 1.3-2-1 [2776 kB] 354s Preconfiguring packages ... 355s Fetched 300 MB in 21s (14.5 MB/s) 355s Selecting previously unselected package libisl23:amd64. 355s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75551 files and directories currently installed.) 355s Preparing to unpack .../000-libisl23_0.27-1_amd64.deb ... 355s Unpacking libisl23:amd64 (0.27-1) ... 355s Selecting previously unselected package libmpc3:amd64. 355s Preparing to unpack .../001-libmpc3_1.3.1-1build2_amd64.deb ... 355s Unpacking libmpc3:amd64 (1.3.1-1build2) ... 355s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 355s Preparing to unpack .../002-cpp-14-x86-64-linux-gnu_14.2.0-7ubuntu1_amd64.deb ... 355s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-7ubuntu1) ... 355s Selecting previously unselected package cpp-14. 355s Preparing to unpack .../003-cpp-14_14.2.0-7ubuntu1_amd64.deb ... 355s Unpacking cpp-14 (14.2.0-7ubuntu1) ... 355s Selecting previously unselected package cpp-x86-64-linux-gnu. 355s Preparing to unpack .../004-cpp-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 355s Unpacking cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 355s Selecting previously unselected package cpp. 355s Preparing to unpack .../005-cpp_4%3a14.1.0-2ubuntu1_amd64.deb ... 355s Unpacking cpp (4:14.1.0-2ubuntu1) ... 355s Selecting previously unselected package libcc1-0:amd64. 355s Preparing to unpack .../006-libcc1-0_14.2.0-7ubuntu1_amd64.deb ... 355s Unpacking libcc1-0:amd64 (14.2.0-7ubuntu1) ... 355s Selecting previously unselected package libgomp1:amd64. 355s Preparing to unpack .../007-libgomp1_14.2.0-7ubuntu1_amd64.deb ... 355s Unpacking libgomp1:amd64 (14.2.0-7ubuntu1) ... 355s Selecting previously unselected package libitm1:amd64. 355s Preparing to unpack .../008-libitm1_14.2.0-7ubuntu1_amd64.deb ... 355s Unpacking libitm1:amd64 (14.2.0-7ubuntu1) ... 355s Selecting previously unselected package libasan8:amd64. 355s Preparing to unpack .../009-libasan8_14.2.0-7ubuntu1_amd64.deb ... 355s Unpacking libasan8:amd64 (14.2.0-7ubuntu1) ... 355s Selecting previously unselected package liblsan0:amd64. 355s Preparing to unpack .../010-liblsan0_14.2.0-7ubuntu1_amd64.deb ... 355s Unpacking liblsan0:amd64 (14.2.0-7ubuntu1) ... 355s Selecting previously unselected package libtsan2:amd64. 355s Preparing to unpack .../011-libtsan2_14.2.0-7ubuntu1_amd64.deb ... 355s Unpacking libtsan2:amd64 (14.2.0-7ubuntu1) ... 355s Selecting previously unselected package libubsan1:amd64. 355s Preparing to unpack .../012-libubsan1_14.2.0-7ubuntu1_amd64.deb ... 355s Unpacking libubsan1:amd64 (14.2.0-7ubuntu1) ... 355s Selecting previously unselected package libhwasan0:amd64. 355s Preparing to unpack .../013-libhwasan0_14.2.0-7ubuntu1_amd64.deb ... 355s Unpacking libhwasan0:amd64 (14.2.0-7ubuntu1) ... 355s Selecting previously unselected package libquadmath0:amd64. 355s Preparing to unpack .../014-libquadmath0_14.2.0-7ubuntu1_amd64.deb ... 355s Unpacking libquadmath0:amd64 (14.2.0-7ubuntu1) ... 355s Selecting previously unselected package libgcc-14-dev:amd64. 355s Preparing to unpack .../015-libgcc-14-dev_14.2.0-7ubuntu1_amd64.deb ... 355s Unpacking libgcc-14-dev:amd64 (14.2.0-7ubuntu1) ... 355s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 355s Preparing to unpack .../016-gcc-14-x86-64-linux-gnu_14.2.0-7ubuntu1_amd64.deb ... 355s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-7ubuntu1) ... 356s Selecting previously unselected package gcc-14. 356s Preparing to unpack .../017-gcc-14_14.2.0-7ubuntu1_amd64.deb ... 356s Unpacking gcc-14 (14.2.0-7ubuntu1) ... 356s Selecting previously unselected package gcc-x86-64-linux-gnu. 356s Preparing to unpack .../018-gcc-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 356s Unpacking gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 356s Selecting previously unselected package gcc. 356s Preparing to unpack .../019-gcc_4%3a14.1.0-2ubuntu1_amd64.deb ... 356s Unpacking gcc (4:14.1.0-2ubuntu1) ... 356s Selecting previously unselected package libstdc++-14-dev:amd64. 356s Preparing to unpack .../020-libstdc++-14-dev_14.2.0-7ubuntu1_amd64.deb ... 356s Unpacking libstdc++-14-dev:amd64 (14.2.0-7ubuntu1) ... 356s Selecting previously unselected package g++-14-x86-64-linux-gnu. 356s Preparing to unpack .../021-g++-14-x86-64-linux-gnu_14.2.0-7ubuntu1_amd64.deb ... 356s Unpacking g++-14-x86-64-linux-gnu (14.2.0-7ubuntu1) ... 356s Selecting previously unselected package g++-14. 356s Preparing to unpack .../022-g++-14_14.2.0-7ubuntu1_amd64.deb ... 356s Unpacking g++-14 (14.2.0-7ubuntu1) ... 356s Selecting previously unselected package g++-x86-64-linux-gnu. 356s Preparing to unpack .../023-g++-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 356s Unpacking g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 356s Selecting previously unselected package g++. 356s Preparing to unpack .../024-g++_4%3a14.1.0-2ubuntu1_amd64.deb ... 356s Unpacking g++ (4:14.1.0-2ubuntu1) ... 356s Selecting previously unselected package build-essential. 356s Preparing to unpack .../025-build-essential_12.10ubuntu1_amd64.deb ... 356s Unpacking build-essential (12.10ubuntu1) ... 356s Selecting previously unselected package dctrl-tools. 356s Preparing to unpack .../026-dctrl-tools_2.24-3build3_amd64.deb ... 356s Unpacking dctrl-tools (2.24-3build3) ... 356s Selecting previously unselected package fonts-dejavu-mono. 356s Preparing to unpack .../027-fonts-dejavu-mono_2.37-8_all.deb ... 356s Unpacking fonts-dejavu-mono (2.37-8) ... 356s Selecting previously unselected package fonts-dejavu-core. 356s Preparing to unpack .../028-fonts-dejavu-core_2.37-8_all.deb ... 356s Unpacking fonts-dejavu-core (2.37-8) ... 356s Selecting previously unselected package fontconfig-config. 356s Preparing to unpack .../029-fontconfig-config_2.15.0-1.1ubuntu2_amd64.deb ... 356s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 356s Selecting previously unselected package libfontconfig1:amd64. 356s Preparing to unpack .../030-libfontconfig1_2.15.0-1.1ubuntu2_amd64.deb ... 356s Unpacking libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ... 356s Selecting previously unselected package fontconfig. 357s Preparing to unpack .../031-fontconfig_2.15.0-1.1ubuntu2_amd64.deb ... 357s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 357s Selecting previously unselected package fonts-font-awesome. 357s Preparing to unpack .../032-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 357s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 357s Selecting previously unselected package fonts-glyphicons-halflings. 357s Preparing to unpack .../033-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 357s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 357s Selecting previously unselected package fonts-mathjax. 357s Preparing to unpack .../034-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 357s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 357s Selecting previously unselected package gdal-data. 357s Preparing to unpack .../035-gdal-data_3.9.1+dfsg-1build2_all.deb ... 357s Unpacking gdal-data (3.9.1+dfsg-1build2) ... 357s Selecting previously unselected package gdal-plugins:amd64. 357s Preparing to unpack .../036-gdal-plugins_3.9.1+dfsg-1build2_amd64.deb ... 357s Unpacking gdal-plugins:amd64 (3.9.1+dfsg-1build2) ... 357s Selecting previously unselected package libgfortran5:amd64. 357s Preparing to unpack .../037-libgfortran5_14.2.0-7ubuntu1_amd64.deb ... 357s Unpacking libgfortran5:amd64 (14.2.0-7ubuntu1) ... 357s Selecting previously unselected package libgfortran-14-dev:amd64. 357s Preparing to unpack .../038-libgfortran-14-dev_14.2.0-7ubuntu1_amd64.deb ... 357s Unpacking libgfortran-14-dev:amd64 (14.2.0-7ubuntu1) ... 357s Selecting previously unselected package gfortran-14-x86-64-linux-gnu. 357s Preparing to unpack .../039-gfortran-14-x86-64-linux-gnu_14.2.0-7ubuntu1_amd64.deb ... 357s Unpacking gfortran-14-x86-64-linux-gnu (14.2.0-7ubuntu1) ... 357s Selecting previously unselected package gfortran-14. 357s Preparing to unpack .../040-gfortran-14_14.2.0-7ubuntu1_amd64.deb ... 357s Unpacking gfortran-14 (14.2.0-7ubuntu1) ... 357s Selecting previously unselected package gfortran-x86-64-linux-gnu. 357s Preparing to unpack .../041-gfortran-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 357s Unpacking gfortran-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 357s Selecting previously unselected package gfortran. 357s Preparing to unpack .../042-gfortran_4%3a14.1.0-2ubuntu1_amd64.deb ... 357s Unpacking gfortran (4:14.1.0-2ubuntu1) ... 357s Selecting previously unselected package icu-devtools. 357s Preparing to unpack .../043-icu-devtools_74.2-1ubuntu4_amd64.deb ... 357s Unpacking icu-devtools (74.2-1ubuntu4) ... 357s Selecting previously unselected package javascript-common. 357s Preparing to unpack .../044-javascript-common_11+nmu1_all.deb ... 357s Unpacking javascript-common (11+nmu1) ... 357s Selecting previously unselected package libaec0:amd64. 357s Preparing to unpack .../045-libaec0_1.1.3-1_amd64.deb ... 357s Unpacking libaec0:amd64 (1.1.3-1) ... 357s Selecting previously unselected package libaom3:amd64. 357s Preparing to unpack .../046-libaom3_3.11.0~rc1-1_amd64.deb ... 357s Unpacking libaom3:amd64 (3.11.0~rc1-1) ... 357s Selecting previously unselected package libblas3:amd64. 357s Preparing to unpack .../047-libblas3_3.12.0-3build2_amd64.deb ... 357s Unpacking libblas3:amd64 (3.12.0-3build2) ... 357s Selecting previously unselected package liblapack3:amd64. 357s Preparing to unpack .../048-liblapack3_3.12.0-3build2_amd64.deb ... 357s Unpacking liblapack3:amd64 (3.12.0-3build2) ... 357s Selecting previously unselected package libarpack2t64:amd64. 357s Preparing to unpack .../049-libarpack2t64_3.9.1-1.1ubuntu1_amd64.deb ... 357s Unpacking libarpack2t64:amd64 (3.9.1-1.1ubuntu1) ... 357s Selecting previously unselected package libsuperlu6:amd64. 357s Preparing to unpack .../050-libsuperlu6_6.0.1+dfsg1-1build3_amd64.deb ... 357s Unpacking libsuperlu6:amd64 (6.0.1+dfsg1-1build3) ... 357s Selecting previously unselected package libarmadillo14. 357s Preparing to unpack .../051-libarmadillo14_1%3a14.0.1+dfsg-2_amd64.deb ... 357s Unpacking libarmadillo14 (1:14.0.1+dfsg-2) ... 357s Selecting previously unselected package libblas-dev:amd64. 357s Preparing to unpack .../052-libblas-dev_3.12.0-3build2_amd64.deb ... 357s Unpacking libblas-dev:amd64 (3.12.0-3build2) ... 357s Selecting previously unselected package libsnappy1v5:amd64. 357s Preparing to unpack .../053-libsnappy1v5_1.2.1-1_amd64.deb ... 357s Unpacking libsnappy1v5:amd64 (1.2.1-1) ... 358s Selecting previously unselected package libblosc1:amd64. 358s Preparing to unpack .../054-libblosc1_1.21.5+ds-1build1_amd64.deb ... 358s Unpacking libblosc1:amd64 (1.21.5+ds-1build1) ... 358s Selecting previously unselected package libbz2-dev:amd64. 358s Preparing to unpack .../055-libbz2-dev_1.0.8-6_amd64.deb ... 358s Unpacking libbz2-dev:amd64 (1.0.8-6) ... 358s Selecting previously unselected package libpixman-1-0:amd64. 358s Preparing to unpack .../056-libpixman-1-0_0.44.0-2_amd64.deb ... 358s Unpacking libpixman-1-0:amd64 (0.44.0-2) ... 358s Selecting previously unselected package libxcb-render0:amd64. 358s Preparing to unpack .../057-libxcb-render0_1.17.0-2_amd64.deb ... 358s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 358s Selecting previously unselected package libxcb-shm0:amd64. 358s Preparing to unpack .../058-libxcb-shm0_1.17.0-2_amd64.deb ... 358s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 358s Selecting previously unselected package libxrender1:amd64. 358s Preparing to unpack .../059-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 358s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 358s Selecting previously unselected package libcairo2:amd64. 358s Preparing to unpack .../060-libcairo2_1.18.2-2_amd64.deb ... 358s Unpacking libcairo2:amd64 (1.18.2-2) ... 358s Selecting previously unselected package libcfitsio10t64:amd64. 358s Preparing to unpack .../061-libcfitsio10t64_4.4.1-2_amd64.deb ... 358s Unpacking libcfitsio10t64:amd64 (4.4.1-2) ... 358s Selecting previously unselected package libdatrie1:amd64. 358s Preparing to unpack .../062-libdatrie1_0.2.13-3build1_amd64.deb ... 358s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 358s Selecting previously unselected package libde265-0:amd64. 358s Preparing to unpack .../063-libde265-0_1.0.15-1build4_amd64.deb ... 358s Unpacking libde265-0:amd64 (1.0.15-1build4) ... 358s Selecting previously unselected package libdeflate0:amd64. 358s Preparing to unpack .../064-libdeflate0_1.22-1_amd64.deb ... 358s Unpacking libdeflate0:amd64 (1.22-1) ... 358s Selecting previously unselected package libdeflate-dev:amd64. 358s Preparing to unpack .../065-libdeflate-dev_1.22-1_amd64.deb ... 358s Unpacking libdeflate-dev:amd64 (1.22-1) ... 358s Selecting previously unselected package libfyba0t64:amd64. 358s Preparing to unpack .../066-libfyba0t64_4.1.1-11build1_amd64.deb ... 358s Unpacking libfyba0t64:amd64 (4.1.1-11build1) ... 358s Selecting previously unselected package libminizip1t64:amd64. 358s Preparing to unpack .../067-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ... 358s Unpacking libminizip1t64:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 358s Selecting previously unselected package libfreexl1:amd64. 358s Preparing to unpack .../068-libfreexl1_2.0.0-1build2_amd64.deb ... 358s Unpacking libfreexl1:amd64 (2.0.0-1build2) ... 358s Selecting previously unselected package libgeos3.12.2:amd64. 358s Preparing to unpack .../069-libgeos3.12.2_3.12.2-1_amd64.deb ... 358s Unpacking libgeos3.12.2:amd64 (3.12.2-1) ... 358s Selecting previously unselected package libgeos-c1t64:amd64. 358s Preparing to unpack .../070-libgeos-c1t64_3.12.2-1_amd64.deb ... 358s Unpacking libgeos-c1t64:amd64 (3.12.2-1) ... 358s Selecting previously unselected package proj-data. 358s Preparing to unpack .../071-proj-data_9.4.1-1_all.deb ... 358s Unpacking proj-data (9.4.1-1) ... 358s Selecting previously unselected package libjbig0:amd64. 358s Preparing to unpack .../072-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 358s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 358s Selecting previously unselected package libjpeg-turbo8:amd64. 358s Preparing to unpack .../073-libjpeg-turbo8_2.1.5-2ubuntu2_amd64.deb ... 358s Unpacking libjpeg-turbo8:amd64 (2.1.5-2ubuntu2) ... 358s Selecting previously unselected package libjpeg8:amd64. 358s Preparing to unpack .../074-libjpeg8_8c-2ubuntu11_amd64.deb ... 358s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 358s Selecting previously unselected package liblerc4:amd64. 358s Preparing to unpack .../075-liblerc4_4.0.0+ds-4ubuntu2_amd64.deb ... 358s Unpacking liblerc4:amd64 (4.0.0+ds-4ubuntu2) ... 358s Selecting previously unselected package libsharpyuv0:amd64. 358s Preparing to unpack .../076-libsharpyuv0_1.4.0-0.1_amd64.deb ... 358s Unpacking libsharpyuv0:amd64 (1.4.0-0.1) ... 358s Selecting previously unselected package libwebp7:amd64. 358s Preparing to unpack .../077-libwebp7_1.4.0-0.1_amd64.deb ... 358s Unpacking libwebp7:amd64 (1.4.0-0.1) ... 358s Selecting previously unselected package libtiff6:amd64. 358s Preparing to unpack .../078-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ... 358s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 358s Selecting previously unselected package libproj25:amd64. 358s Preparing to unpack .../079-libproj25_9.4.1-1_amd64.deb ... 358s Unpacking libproj25:amd64 (9.4.1-1) ... 358s Selecting previously unselected package libgeotiff5:amd64. 358s 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previously unselected package librttopo1:amd64. 359s Preparing to unpack .../106-librttopo1_1.1.0-3build2_amd64.deb ... 359s Unpacking librttopo1:amd64 (1.1.0-3build2) ... 359s Selecting previously unselected package libspatialite8t64:amd64. 359s Preparing to unpack .../107-libspatialite8t64_5.1.0-3build1_amd64.deb ... 359s Unpacking libspatialite8t64:amd64 (5.1.0-3build1) ... 359s Selecting previously unselected package libxerces-c3.2t64:amd64. 359s Preparing to unpack .../108-libxerces-c3.2t64_3.2.4+debian-1.3_amd64.deb ... 359s Unpacking libxerces-c3.2t64:amd64 (3.2.4+debian-1.3) ... 359s Selecting previously unselected package libgdal35:amd64. 359s Preparing to unpack .../109-libgdal35_3.9.1+dfsg-1build2_amd64.deb ... 359s Unpacking libgdal35:amd64 (3.9.1+dfsg-1build2) ... 359s Selecting previously unselected package libgraphite2-3:amd64. 359s Preparing to unpack .../110-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 359s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 359s 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360s Selecting previously unselected package liblapack-dev:amd64. 360s Preparing to unpack .../132-liblapack-dev_3.12.0-3build2_amd64.deb ... 360s Unpacking liblapack-dev:amd64 (3.12.0-3build2) ... 360s Selecting previously unselected package liblua5.4-0:amd64. 360s Preparing to unpack .../133-liblua5.4-0_5.4.6-3build2_amd64.deb ... 360s Unpacking liblua5.4-0:amd64 (5.4.6-3build2) ... 360s Selecting previously unselected package libncurses-dev:amd64. 360s Preparing to unpack .../134-libncurses-dev_6.5-2_amd64.deb ... 360s Unpacking libncurses-dev:amd64 (6.5-2) ... 360s Selecting previously unselected package libthai-data. 360s Preparing to unpack .../135-libthai-data_0.1.29-2build1_all.deb ... 360s Unpacking libthai-data (0.1.29-2build1) ... 360s Selecting previously unselected package libthai0:amd64. 360s Preparing to unpack .../136-libthai0_0.1.29-2build1_amd64.deb ... 360s Unpacking libthai0:amd64 (0.1.29-2build1) ... 360s Selecting previously unselected package libpango-1.0-0:amd64. 360s Preparing to unpack .../137-libpango-1.0-0_1.54.0+ds-2_amd64.deb ... 360s Unpacking libpango-1.0-0:amd64 (1.54.0+ds-2) ... 360s Selecting previously unselected package libpangoft2-1.0-0:amd64. 360s Preparing to unpack .../138-libpangoft2-1.0-0_1.54.0+ds-2_amd64.deb ... 360s Unpacking libpangoft2-1.0-0:amd64 (1.54.0+ds-2) ... 360s Selecting previously unselected package libpangocairo-1.0-0:amd64. 360s Preparing to unpack .../139-libpangocairo-1.0-0_1.54.0+ds-2_amd64.deb ... 360s Unpacking libpangocairo-1.0-0:amd64 (1.54.0+ds-2) ... 360s Selecting previously unselected package libpaper1:amd64. 360s Preparing to unpack .../140-libpaper1_1.1.29build1_amd64.deb ... 360s Unpacking libpaper1:amd64 (1.1.29build1) ... 360s Selecting previously unselected package libpaper-utils. 360s Preparing to unpack .../141-libpaper-utils_1.1.29build1_amd64.deb ... 360s Unpacking libpaper-utils (1.1.29build1) ... 360s Selecting previously unselected package libpcre2-16-0:amd64. 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previously unselected package zip. 361s Preparing to unpack .../158-zip_3.0-14_amd64.deb ... 361s Unpacking zip (3.0-14) ... 361s Selecting previously unselected package unzip. 361s Preparing to unpack .../159-unzip_6.0-28ubuntu6_amd64.deb ... 361s Unpacking unzip (6.0-28ubuntu6) ... 361s Selecting previously unselected package xdg-utils. 361s Preparing to unpack .../160-xdg-utils_1.2.1-0ubuntu1_all.deb ... 361s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 361s Selecting previously unselected package r-base-core. 361s Preparing to unpack .../161-r-base-core_4.4.2-1_amd64.deb ... 361s Unpacking r-base-core (4.4.2-1) ... 361s Selecting previously unselected package r-cran-littler. 361s Preparing to unpack .../162-r-cran-littler_0.3.20-1_amd64.deb ... 361s Unpacking r-cran-littler (0.3.20-1) ... 361s Selecting previously unselected package littler. 361s Preparing to unpack .../163-littler_0.3.20-1_all.deb ... 361s Unpacking littler (0.3.20-1) ... 361s Selecting previously unselected package node-bootstrap-sass. 361s Preparing to unpack .../164-node-bootstrap-sass_3.4.3-2_all.deb ... 361s Unpacking node-bootstrap-sass (3.4.3-2) ... 361s Selecting previously unselected package node-html5shiv. 361s Preparing to unpack .../165-node-html5shiv_3.7.3+dfsg-5_all.deb ... 361s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 362s Selecting previously unselected package node-normalize.css. 362s Preparing to unpack .../166-node-normalize.css_8.0.1-5_all.deb ... 362s Unpacking node-normalize.css (8.0.1-5) ... 362s Selecting previously unselected package pandoc-data. 362s Preparing to unpack .../167-pandoc-data_3.1.11.1-3_all.deb ... 362s Unpacking pandoc-data (3.1.11.1-3) ... 362s Selecting previously unselected package pandoc. 362s Preparing to unpack .../168-pandoc_3.1.11.1+ds-2_amd64.deb ... 362s Unpacking pandoc (3.1.11.1+ds-2) ... 362s Selecting previously unselected package liblzma-dev:amd64. 362s Preparing to unpack .../169-liblzma-dev_5.6.2-2_amd64.deb ... 362s Unpacking liblzma-dev:amd64 (5.6.2-2) ... 362s Selecting previously unselected package pkgconf-bin. 362s Preparing to unpack .../170-pkgconf-bin_1.8.1-4_amd64.deb ... 362s Unpacking pkgconf-bin (1.8.1-4) ... 362s Selecting previously unselected package pkgconf:amd64. 362s Preparing to unpack .../171-pkgconf_1.8.1-4_amd64.deb ... 362s Unpacking pkgconf:amd64 (1.8.1-4) ... 362s Selecting previously unselected package libtirpc-dev:amd64. 362s Preparing to unpack .../172-libtirpc-dev_1.3.4+ds-1.3_amd64.deb ... 362s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1.3) ... 362s Selecting previously unselected package r-base-dev. 362s Preparing to unpack .../173-r-base-dev_4.4.2-1_all.deb ... 362s Unpacking r-base-dev (4.4.2-1) ... 362s Selecting previously unselected package pkg-r-autopkgtest. 362s Preparing to unpack .../174-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 362s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 362s Selecting previously unselected package r-cran-base64enc. 362s Preparing to unpack .../175-r-cran-base64enc_0.1-3-3_amd64.deb ... 362s Unpacking r-cran-base64enc (0.1-3-3) ... 362s Selecting previously unselected package r-cran-bdsmatrix. 362s Preparing to unpack .../176-r-cran-bdsmatrix_1.3-7-1_amd64.deb ... 362s Unpacking r-cran-bdsmatrix (1.3-7-1) ... 362s Selecting previously unselected package r-cran-rlang. 362s Preparing to unpack .../177-r-cran-rlang_1.1.4-1_amd64.deb ... 362s Unpacking r-cran-rlang (1.1.4-1) ... 362s Selecting previously unselected package r-cran-fastmap. 362s Preparing to unpack .../178-r-cran-fastmap_1.2.0-1_amd64.deb ... 362s Unpacking r-cran-fastmap (1.2.0-1) ... 363s Selecting previously unselected package r-cran-cachem. 363s Preparing to unpack .../179-r-cran-cachem_1.1.0-1_amd64.deb ... 363s Unpacking r-cran-cachem (1.1.0-1) ... 363s Selecting previously unselected package r-cran-digest. 363s Preparing to unpack .../180-r-cran-digest_0.6.37-1_amd64.deb ... 363s Unpacking r-cran-digest (0.6.37-1) ... 363s Selecting previously unselected package r-cran-htmltools. 363s Preparing to unpack .../181-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 363s Unpacking r-cran-htmltools (0.5.8.1-1) ... 363s Selecting previously unselected package r-cran-jquerylib. 363s Preparing to unpack .../182-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 363s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 363s Selecting previously unselected package r-cran-jsonlite. 363s Preparing to unpack .../183-r-cran-jsonlite_1.8.8+dfsg-1_amd64.deb ... 363s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 363s Selecting previously unselected package r-cran-cli. 363s Preparing to unpack .../184-r-cran-cli_3.6.2-1_amd64.deb ... 363s Unpacking r-cran-cli (3.6.2-1) ... 363s Selecting previously unselected package r-cran-glue. 363s Preparing to unpack .../185-r-cran-glue_1.7.0-1_amd64.deb ... 363s Unpacking r-cran-glue (1.7.0-1) ... 363s Selecting previously unselected package r-cran-lifecycle. 363s Preparing to unpack .../186-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 363s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 363s Selecting previously unselected package r-cran-memoise. 363s Preparing to unpack .../187-r-cran-memoise_2.0.1-1_all.deb ... 363s Unpacking r-cran-memoise (2.0.1-1) ... 363s Selecting previously unselected package r-cran-mime. 363s Preparing to unpack .../188-r-cran-mime_0.12-2_amd64.deb ... 363s Unpacking r-cran-mime (0.12-2) ... 363s Selecting previously unselected package r-cran-fs. 363s Preparing to unpack .../189-r-cran-fs_1.6.4+dfsg-1_amd64.deb ... 363s Unpacking r-cran-fs (1.6.4+dfsg-1) ... 363s Selecting previously unselected package r-cran-r6. 363s Preparing to unpack .../190-r-cran-r6_2.5.1-1_all.deb ... 363s Unpacking r-cran-r6 (2.5.1-1) ... 363s Selecting previously unselected package r-cran-rappdirs. 363s Preparing to unpack .../191-r-cran-rappdirs_0.3.3-1_amd64.deb ... 363s Unpacking r-cran-rappdirs (0.3.3-1) ... 363s Selecting previously unselected package r-cran-sass. 363s Preparing to unpack .../192-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 363s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 363s Selecting previously unselected package r-cran-bslib. 363s Preparing to unpack .../193-r-cran-bslib_0.7.0+dfsg-1_all.deb ... 363s Unpacking r-cran-bslib (0.7.0+dfsg-1) ... 363s Selecting previously unselected package r-cran-mass. 363s Preparing to unpack .../194-r-cran-mass_7.3-61-1_amd64.deb ... 363s Unpacking r-cran-mass (7.3-61-1) ... 363s Selecting previously unselected package r-cran-class. 363s Preparing to unpack .../195-r-cran-class_7.3-22-2build1_amd64.deb ... 363s Unpacking r-cran-class (7.3-22-2build1) ... 363s Selecting previously unselected package r-cran-proxy. 363s Preparing to unpack .../196-r-cran-proxy_0.4-27-1_amd64.deb ... 363s Unpacking r-cran-proxy (0.4-27-1) ... 363s Selecting previously unselected package r-cran-e1071. 363s Preparing to unpack .../197-r-cran-e1071_1.7-16-1_amd64.deb ... 363s Unpacking r-cran-e1071 (1.7-16-1) ... 363s Selecting previously unselected package r-cran-kernsmooth. 363s Preparing to unpack .../198-r-cran-kernsmooth_2.23-24-1_amd64.deb ... 363s Unpacking r-cran-kernsmooth (2.23-24-1) ... 363s Selecting previously unselected package r-cran-classint. 363s Preparing to unpack .../199-r-cran-classint_0.4-10+dfsg-1_amd64.deb ... 363s Unpacking r-cran-classint (0.4-10+dfsg-1) ... 363s Selecting previously unselected package r-cran-pkgkitten. 363s Preparing to unpack .../200-r-cran-pkgkitten_0.2.4-1_all.deb ... 363s Unpacking r-cran-pkgkitten (0.2.4-1) ... 363s Selecting previously unselected package r-cran-rcpp. 363s Preparing to unpack .../201-r-cran-rcpp_1.0.13-1_amd64.deb ... 363s Unpacking r-cran-rcpp (1.0.13-1) ... 363s Selecting previously unselected package r-cran-collapse. 363s Preparing to unpack .../202-r-cran-collapse_2.0.16-1_amd64.deb ... 363s Unpacking r-cran-collapse (2.0.16-1) ... 363s Selecting previously unselected package r-cran-commonmark. 363s Preparing to unpack .../203-r-cran-commonmark_1.9.1-1_amd64.deb ... 363s Unpacking r-cran-commonmark (1.9.1-1) ... 363s Selecting previously unselected package r-cran-crayon. 363s Preparing to unpack .../204-r-cran-crayon_1.5.2-1_all.deb ... 363s Unpacking r-cran-crayon (1.5.2-1) ... 364s Selecting previously unselected package r-cran-dbi. 364s Preparing to unpack .../205-r-cran-dbi_1.2.3-1_all.deb ... 364s Unpacking r-cran-dbi (1.2.3-1) ... 364s Selecting previously unselected package r-cran-evaluate. 364s Preparing to unpack .../206-r-cran-evaluate_0.24.0-1_all.deb ... 364s Unpacking r-cran-evaluate (0.24.0-1) ... 364s Selecting previously unselected package r-cran-fontawesome. 364s Preparing to unpack .../207-r-cran-fontawesome_0.5.2-1_all.deb ... 364s Unpacking r-cran-fontawesome (0.5.2-1) ... 364s Selecting previously unselected package r-cran-foreign. 364s Preparing to unpack .../208-r-cran-foreign_0.8.87-1_amd64.deb ... 364s Unpacking r-cran-foreign (0.8.87-1) ... 364s Selecting previously unselected package r-cran-formula. 364s Preparing to unpack .../209-r-cran-formula_1.2-5-1_all.deb ... 364s Unpacking r-cran-formula (1.2-5-1) ... 364s Selecting previously unselected package r-cran-generics. 364s Preparing to unpack .../210-r-cran-generics_0.1.3-1_all.deb ... 364s Unpacking r-cran-generics (0.1.3-1) ... 364s Selecting previously unselected package r-cran-xfun. 364s Preparing to unpack .../211-r-cran-xfun_0.49+dfsg-1_amd64.deb ... 364s Unpacking r-cran-xfun (0.49+dfsg-1) ... 364s Selecting previously unselected package r-cran-highr. 364s Preparing to unpack .../212-r-cran-highr_0.11+dfsg-1_all.deb ... 364s Unpacking r-cran-highr (0.11+dfsg-1) ... 364s Selecting previously unselected package r-cran-later. 364s Preparing to unpack .../213-r-cran-later_1.3.2+dfsg-1_amd64.deb ... 364s Unpacking r-cran-later (1.3.2+dfsg-1) ... 364s Selecting previously unselected package r-cran-magrittr. 364s Preparing to unpack .../214-r-cran-magrittr_2.0.3-1_amd64.deb ... 364s Unpacking r-cran-magrittr (2.0.3-1) ... 364s Selecting previously unselected package r-cran-promises. 364s Preparing to unpack .../215-r-cran-promises_1.3.0+dfsg-1_amd64.deb ... 364s Unpacking r-cran-promises (1.3.0+dfsg-1) ... 364s Selecting previously unselected package r-cran-httpuv. 364s Preparing to unpack .../216-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 364s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 364s Selecting previously unselected package r-cran-intervals. 364s Preparing to unpack .../217-r-cran-intervals_0.15.4-1_amd64.deb ... 364s Unpacking r-cran-intervals (0.15.4-1) ... 364s Selecting previously unselected package r-cran-isocodes. 364s Preparing to unpack .../218-r-cran-isocodes_2024.02.12-1_all.deb ... 364s Unpacking r-cran-isocodes (2024.02.12-1) ... 364s Selecting previously unselected package r-cran-yaml. 364s Preparing to unpack .../219-r-cran-yaml_2.3.8-2_amd64.deb ... 364s Unpacking r-cran-yaml (2.3.8-2) ... 364s Selecting previously unselected package libjs-mathjax. 364s Preparing to unpack .../220-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 364s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 365s Selecting previously unselected package r-cran-knitr. 365s Preparing to unpack .../221-r-cran-knitr_1.47+dfsg-1_all.deb ... 365s Unpacking r-cran-knitr (1.47+dfsg-1) ... 365s Selecting previously unselected package r-cran-lattice. 365s Preparing to unpack .../222-r-cran-lattice_0.22-6-1_amd64.deb ... 365s Unpacking r-cran-lattice (0.22-6-1) ... 365s Selecting previously unselected package r-cran-zoo. 365s Preparing to unpack .../223-r-cran-zoo_1.8-12-2_amd64.deb ... 365s Unpacking r-cran-zoo (1.8-12-2) ... 365s Selecting previously unselected package r-cran-lmtest. 365s Preparing to unpack .../224-r-cran-lmtest_0.9.40-1_amd64.deb ... 365s Unpacking r-cran-lmtest (0.9.40-1) ... 365s Selecting previously unselected package r-cran-maps. 365s Preparing to unpack .../225-r-cran-maps_3.4.2-1_amd64.deb ... 365s Unpacking r-cran-maps (3.4.2-1) ... 365s Selecting previously unselected package r-cran-mapdata. 365s Preparing to unpack .../226-r-cran-mapdata_2.3.1-1_amd64.deb ... 365s Unpacking r-cran-mapdata (2.3.1-1) ... 365s Selecting previously unselected package r-cran-markdown. 365s Preparing to unpack .../227-r-cran-markdown_1.12+dfsg-2_all.deb ... 365s Unpacking r-cran-markdown (1.12+dfsg-2) ... 365s Selecting previously unselected package r-cran-misctools. 365s Preparing to unpack .../228-r-cran-misctools_0.6-28-1_all.deb ... 365s Unpacking r-cran-misctools (0.6-28-1) ... 365s Selecting previously unselected package r-cran-sandwich. 365s Preparing to unpack .../229-r-cran-sandwich_3.1-0-1_all.deb ... 365s Unpacking r-cran-sandwich (3.1-0-1) ... 365s Selecting previously unselected package r-cran-maxlik. 365s Preparing to unpack .../230-r-cran-maxlik_1.5-2.1-1_all.deb ... 365s Unpacking r-cran-maxlik (1.5-2.1-1) ... 365s Selecting previously unselected package r-cran-nlme. 365s Preparing to unpack .../231-r-cran-nlme_3.1.166-1_amd64.deb ... 365s Unpacking r-cran-nlme (3.1.166-1) ... 365s Selecting previously unselected package r-cran-rbibutils. 365s Preparing to unpack .../232-r-cran-rbibutils_2.3-1_amd64.deb ... 365s Unpacking r-cran-rbibutils (2.3-1) ... 365s Selecting previously unselected package r-cran-rdpack. 365s Preparing to unpack .../233-r-cran-rdpack_2.6.1-1_all.deb ... 365s Unpacking r-cran-rdpack (2.6.1-1) ... 365s Selecting previously unselected package r-cran-plm. 365s Preparing to unpack .../234-r-cran-plm_2.6-4-1_all.deb ... 365s Unpacking r-cran-plm (2.6-4-1) ... 365s Selecting previously unselected package r-cran-sp. 365s Preparing to unpack .../235-r-cran-sp_1%3a2.1-4+dfsg-1_amd64.deb ... 365s Unpacking r-cran-sp (1:2.1-4+dfsg-1) ... 365s Selecting previously unselected package r-cran-terra. 365s Preparing to unpack .../236-r-cran-terra_1.7-78-1_amd64.deb ... 365s Unpacking r-cran-terra (1.7-78-1) ... 366s Selecting previously unselected package r-cran-raster. 366s Preparing to unpack .../237-r-cran-raster_3.6-30-1_amd64.deb ... 366s Unpacking r-cran-raster (3.6-30-1) ... 366s Selecting previously unselected package r-cran-rcolorbrewer. 366s Preparing to unpack .../238-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 366s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 366s Selecting previously unselected package r-cran-tinytex. 366s Preparing to unpack .../239-r-cran-tinytex_0.53-1_all.deb ... 366s Unpacking r-cran-tinytex (0.53-1) ... 366s Selecting previously unselected package libjs-modernizr. 366s Preparing to unpack .../240-libjs-modernizr_3.13.0-0.1_all.deb ... 366s Unpacking libjs-modernizr (3.13.0-0.1) ... 366s Selecting previously unselected package r-cran-xtable. 366s Preparing to unpack .../241-r-cran-xtable_1%3a1.8-4-2_all.deb ... 366s Unpacking r-cran-xtable (1:1.8-4-2) ... 366s Selecting previously unselected package r-cran-sourcetools. 366s Preparing to unpack .../242-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 366s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 366s Selecting previously unselected package r-cran-withr. 366s Preparing to unpack .../243-r-cran-withr_3.0.0+dfsg-1_all.deb ... 366s Unpacking r-cran-withr (3.0.0+dfsg-1) ... 366s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 366s Preparing to unpack .../244-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 366s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 366s Selecting previously unselected package r-cran-shiny. 366s Preparing to unpack .../245-r-cran-shiny_1.8.1.1+dfsg-1_all.deb ... 366s Unpacking r-cran-shiny (1.8.1.1+dfsg-1) ... 366s Selecting previously unselected package r-cran-rmarkdown. 366s Preparing to unpack .../246-r-cran-rmarkdown_2.28+dfsg-1_all.deb ... 366s Unpacking r-cran-rmarkdown (2.28+dfsg-1) ... 366s Selecting previously unselected package r-cran-rpostgresql. 366s Preparing to unpack .../247-r-cran-rpostgresql_0.7-7+dfsg-1_amd64.deb ... 366s Unpacking r-cran-rpostgresql (0.7-7+dfsg-1) ... 366s Selecting previously unselected package r-cran-wk. 366s Preparing to unpack .../248-r-cran-wk_0.9.4-1_amd64.deb ... 366s Unpacking r-cran-wk (0.9.4-1) ... 366s Selecting previously unselected package r-cran-s2. 366s Preparing to unpack .../249-r-cran-s2_1.1.6-1build2_amd64.deb ... 366s Unpacking r-cran-s2 (1.1.6-1build2) ... 366s Selecting previously unselected package r-cran-units. 366s Preparing to unpack .../250-r-cran-units_0.8-5+dfsg-1_amd64.deb ... 366s Unpacking r-cran-units (0.8-5+dfsg-1) ... 366s Selecting previously unselected package r-cran-sf. 366s Preparing to unpack .../251-r-cran-sf_1.0-16+dfsg-1build1_amd64.deb ... 366s Unpacking r-cran-sf (1.0-16+dfsg-1build1) ... 366s Selecting previously unselected package r-cran-xts. 366s Preparing to unpack .../252-r-cran-xts_0.14.0-1_amd64.deb ... 366s Unpacking r-cran-xts (0.14.0-1) ... 366s Selecting previously unselected package r-cran-spacetime. 366s Preparing to unpack .../253-r-cran-spacetime_1.3-2-1_all.deb ... 366s Unpacking r-cran-spacetime (1.3-2-1) ... 366s 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r-cran-misctools (0.6-28-1) ... 370s Setting up r-cran-class (7.3-22-2build1) ... 370s Setting up r-cran-sandwich (3.1-0-1) ... 370s Setting up r-cran-fontawesome (0.5.2-1) ... 370s Setting up r-cran-xts (0.14.0-1) ... 370s Setting up r-cran-rdpack (2.6.1-1) ... 370s Setting up gfortran (4:14.1.0-2ubuntu1) ... 370s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 370s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 370s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 370s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 370s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 370s Setting up r-cran-memoise (2.0.1-1) ... 370s Setting up r-cran-promises (1.3.0+dfsg-1) ... 370s Setting up r-cran-e1071 (1.7-16-1) ... 370s Setting up r-cran-maxlik (1.5-2.1-1) ... 370s Setting up r-cran-spacetime (1.3-2-1) ... 370s Setting up r-base-dev (4.4.2-1) ... 370s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 370s Setting up r-cran-plm (2.6-4-1) ... 370s Setting up r-cran-classint (0.4-10+dfsg-1) ... 370s Setting up r-cran-bslib (0.7.0+dfsg-1) ... 370s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 370s Setting up r-cran-shiny (1.8.1.1+dfsg-1) ... 370s Setting up r-cran-rmarkdown (2.28+dfsg-1) ... 370s Setting up libheif-plugin-aomdec:amd64 (1.18.1-2) ... 370s Setting up libheif-plugin-libde265:amd64 (1.18.1-2) ... 370s Setting up libheif1:amd64 (1.18.1-2) ... 370s Setting up libgdal35:amd64 (3.9.1+dfsg-1build2) ... 370s Setting up r-cran-terra (1.7-78-1) ... 370s Setting up r-cran-sf (1.0-16+dfsg-1build1) ... 370s Setting up r-cran-raster (3.6-30-1) ... 370s Setting up autopkgtest-satdep (0) ... 370s Processing triggers for libc-bin (2.40-1ubuntu3) ... 370s Processing triggers for man-db (2.12.1-3) ... 371s Processing triggers for install-info (7.1.1-1) ... 379s (Reading database ... 93994 files and directories currently installed.) 379s Removing autopkgtest-satdep (0) ... 380s autopkgtest [16:11:06]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 380s autopkgtest [16:11:06]: test pkg-r-autopkgtest: [----------------------- 381s Test: Try to load the R library spacetime 381s 381s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 381s Copyright (C) 2024 The R Foundation for Statistical Computing 381s Platform: x86_64-pc-linux-gnu 381s 381s R is free software and comes with ABSOLUTELY NO WARRANTY. 381s You are welcome to redistribute it under certain conditions. 381s Type 'license()' or 'licence()' for distribution details. 381s 381s R is a collaborative project with many contributors. 381s Type 'contributors()' for more information and 381s 'citation()' on how to cite R or R packages in publications. 381s 381s Type 'demo()' for some demos, 'help()' for on-line help, or 381s 'help.start()' for an HTML browser interface to help. 381s Type 'q()' to quit R. 381s 381s > library('spacetime') 381s > 381s > 381s Other tests are currently unsupported! 381s They will be progressively added. 382s autopkgtest [16:11:08]: test pkg-r-autopkgtest: -----------------------] 382s autopkgtest [16:11:08]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 382s pkg-r-autopkgtest PASS 382s autopkgtest [16:11:08]: @@@@@@@@@@@@@@@@@@@@ summary 382s run-unit-test FAIL non-zero exit status 1 382s pkg-r-autopkgtest PASS 387s virt: nova [W] Skipping flock for amd64 387s virt: Creating nova instance adt-plucky-amd64-r-cran-spacetime-20241109-160446-juju-7f2275-prod-proposed-migration-environment-2-4940ee92-0764-464f-b1b7-caca74fea485 from image adt/ubuntu-plucky-amd64-server-20241108.img (UUID 8e5f101b-f604-4dd5-a1be-68c34044e0a9)... 387s virt: nova [W] Skipping flock for amd64 387s virt: Creating nova instance adt-plucky-amd64-r-cran-spacetime-20241109-160446-juju-7f2275-prod-proposed-migration-environment-2-4940ee92-0764-464f-b1b7-caca74fea485 from image adt/ubuntu-plucky-amd64-server-20241108.img (UUID 8e5f101b-f604-4dd5-a1be-68c34044e0a9)...