0s autopkgtest [22:31:44]: starting date and time: 2025-02-15 22:31:44+0000 0s autopkgtest [22:31:44]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [22:31:44]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.aq33xgmy/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc,src:iproute2,src:php-twig,src:postgresql-17,src:postgresql-common,src:roundcube --apt-upgrade r-cran-seurat --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu1 iproute2/6.13.0-1ubuntu1 php-twig/3.19.0-1 postgresql-17/17.3-2 postgresql-common/273 roundcube/1.6.10+dfsg-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-8.secgroup --name adt-plucky-amd64-r-cran-seurat-20250215-223144-juju-7f2275-prod-proposed-migration-environment-15-220a5f6c-a67f-4bd1-863d-b8d0d69d27ce --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 53s autopkgtest [22:32:37]: testbed dpkg architecture: amd64 53s autopkgtest [22:32:37]: testbed apt version: 2.9.28 53s autopkgtest [22:32:37]: @@@@@@@@@@@@@@@@@@@@ test bed setup 53s autopkgtest [22:32:37]: testbed release detected to be: None 54s autopkgtest [22:32:38]: updating testbed package index (apt update) 54s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [110 kB] 55s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 55s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 55s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 55s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [3120 B] 55s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [74.3 kB] 55s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [828 kB] 55s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [13.1 kB] 55s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [154 kB] 55s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [175 kB] 55s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [7984 B] 55s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/restricted i386 Packages [2412 B] 55s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [403 kB] 55s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [949 kB] 55s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [3520 B] 55s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [10.3 kB] 55s Fetched 2734 kB in 1s (2824 kB/s) 56s Reading package lists... 57s + lsb_release --codename --short 57s + RELEASE=plucky 57s + cat 57s + [ plucky != trusty ] 57s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 57s Reading package lists... 57s Building dependency tree... 57s Reading state information... 57s Calculating upgrade... 57s The following packages will be upgraded: 57s libtasn1-6 57s 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 57s Need to get 51.2 kB of archives. 57s After this operation, 22.5 kB of additional disk space will be used. 57s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libtasn1-6 amd64 4.20.0-2 [51.2 kB] 58s Fetched 51.2 kB in 0s (186 kB/s) 58s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108914 files and directories currently installed.) 58s Preparing to unpack .../libtasn1-6_4.20.0-2_amd64.deb ... 58s Unpacking libtasn1-6:amd64 (4.20.0-2) over (4.19.0-3build1) ... 58s Setting up libtasn1-6:amd64 (4.20.0-2) ... 58s Processing triggers for libc-bin (2.40-4ubuntu1) ... 58s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 58s + /usr/lib/apt/apt-helper analyze-pattern ?true 58s + uname -r 58s + sed s/\./\\./g 58s + running_kernel_pattern=^linux-.*6\.12\.0-15-generic.* 58s + apt list ?obsolete 58s + tail -n+2 58s + + cut -d/ -f1 58s grep -v ^linux-.*6\.12\.0-15-generic.* 58s + true 58s + obsolete_pkgs= 58s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove 58s Reading package lists... 59s Building dependency tree... 59s Reading state information... 59s + grep -q trusty /etc/lsb-release 59s + 0 upgraded, 0 newly installed, 0 to remove and 6 not upgraded. 59s [ ! -d /usr/share/doc/unattended-upgrades ] 59s + [ ! -d /usr/share/doc/lxd ] 59s + [ ! -d /usr/share/doc/lxd-client ] 59s + [ ! -d /usr/share/doc/snapd ] 59s + type iptables 59s + cat 59s + chmod 755 /etc/rc.local 59s + . /etc/rc.local 59s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 59s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 59s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 59s + uname -m 59s + [ x86_64 = ppc64le ] 59s + [ -d /run/systemd/system ] 59s + systemd-detect-virt --quiet --vm 59s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 59s + cat 59s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 59s + echo COMPRESS=lz4 59s autopkgtest [22:32:43]: upgrading testbed (apt dist-upgrade and autopurge) 59s Reading package lists... 59s Building dependency tree... 59s Reading state information... 60s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 60s Starting 2 pkgProblemResolver with broken count: 0 60s Done 60s Entering ResolveByKeep 60s 61s The following packages will be upgraded: 61s iproute2 libc-bin libc-dev-bin libc6 libc6-dev locales 61s 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 61s Need to get 11.8 MB of archives. 61s After this operation, 746 kB of additional disk space will be used. 61s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-dev-bin amd64 2.41-1ubuntu1 [24.7 kB] 61s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6-dev amd64 2.41-1ubuntu1 [2182 kB] 61s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 locales all 2.41-1ubuntu1 [4246 kB] 62s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6 amd64 2.41-1ubuntu1 [3327 kB] 62s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-bin amd64 2.41-1ubuntu1 [701 kB] 62s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 iproute2 amd64 6.13.0-1ubuntu1 [1277 kB] 63s Preconfiguring packages ... 63s Fetched 11.8 MB in 2s (6262 kB/s) 63s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108914 files and directories currently installed.) 63s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu1_amd64.deb ... 63s Unpacking libc-dev-bin (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 63s Preparing to unpack .../libc6-dev_2.41-1ubuntu1_amd64.deb ... 63s Unpacking libc6-dev:amd64 (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 63s Preparing to unpack .../locales_2.41-1ubuntu1_all.deb ... 63s Unpacking locales (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 63s Preparing to unpack .../libc6_2.41-1ubuntu1_amd64.deb ... 63s Checking for services that may need to be restarted... 63s Checking init scripts... 63s Checking for services that may need to be restarted... 63s Checking init scripts... 64s Stopping some services possibly affected by the upgrade (will be restarted later): 64s cron: stopping...done. 64s 64s Unpacking libc6:amd64 (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 64s Setting up libc6:amd64 (2.41-1ubuntu1) ... 64s Checking for services that may need to be restarted... 64s Checking init scripts... 64s Restarting services possibly affected by the upgrade: 64s cron: restarting...done. 64s 64s Services restarted successfully. 64s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108915 files and directories currently installed.) 64s Preparing to unpack .../libc-bin_2.41-1ubuntu1_amd64.deb ... 64s Unpacking libc-bin (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 64s Setting up libc-bin (2.41-1ubuntu1) ... 64s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108915 files and directories currently installed.) 64s Preparing to unpack .../iproute2_6.13.0-1ubuntu1_amd64.deb ... 64s Unpacking iproute2 (6.13.0-1ubuntu1) over (6.10.0-2ubuntu1) ... 64s Setting up iproute2 (6.13.0-1ubuntu1) ... 65s Setting up locales (2.41-1ubuntu1) ... 65s Installing new version of config file /etc/locale.alias ... 65s Generating locales (this might take a while)... 67s en_US.UTF-8... done 67s Generation complete. 67s Setting up libc-dev-bin (2.41-1ubuntu1) ... 67s Setting up libc6-dev:amd64 (2.41-1ubuntu1) ... 67s Processing triggers for man-db (2.13.0-1) ... 68s Processing triggers for systemd (257.2-3ubuntu1) ... 69s Reading package lists... 69s Building dependency tree... 69s Reading state information... 69s Starting pkgProblemResolver with broken count: 0 69s Starting 2 pkgProblemResolver with broken count: 0 69s Done 69s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 72s autopkgtest [22:32:56]: testbed running kernel: Linux 6.12.0-15-generic #15-Ubuntu SMP PREEMPT_DYNAMIC Tue Feb 4 16:02:16 UTC 2025 72s autopkgtest [22:32:56]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-seurat 74s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-seurat 5.0.1-1 (dsc) [3385 B] 74s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-seurat 5.0.1-1 (tar) [2226 kB] 74s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-seurat 5.0.1-1 (diff) [4668 B] 74s gpgv: Signature made Fri Nov 24 16:12:03 2023 UTC 74s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 74s gpgv: issuer "tille@debian.org" 74s gpgv: Can't check signature: No public key 74s dpkg-source: warning: cannot verify inline signature for ./r-cran-seurat_5.0.1-1.dsc: no acceptable signature found 74s autopkgtest [22:32:58]: testing package r-cran-seurat version 5.0.1-1 75s autopkgtest [22:32:59]: build not needed 77s autopkgtest [22:33:01]: test run-unit-test: preparing testbed 77s Reading package lists... 78s Building dependency tree... 78s Reading state information... 78s Starting pkgProblemResolver with broken count: 0 78s Starting 2 pkgProblemResolver with broken count: 0 78s Done 79s The following NEW packages will be installed: 79s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 79s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax 79s javascript-common libaec0 libamd3 libasan8 libblas3 libboost-dev 79s libboost1.83-dev libcairo2 libcolamd3 libdatrie1 libdeflate0 79s libfftw3-double3 libfontconfig1 libgcc-14-dev libgfortran5 libglpk40 79s libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-310 libhdf5-hl-310 libhwasan0 79s libice6 libitm1 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap 79s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 79s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 79s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 79s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack3 79s liblerc4 liblsan0 libltdl7 liblua5.4-0 libpango-1.0-0 libpangocairo-1.0-0 79s libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 libquadmath0 79s libsharpyuv0 libsm6 libstdc++-14-dev libsuitesparseconfig7 libsz2 libtcl8.6 79s libthai-data libthai0 libtiff6 libtk8.6 libtsan2 libubsan1 libwebp7 79s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 littler 79s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 79s r-base-core r-bioc-biobase r-bioc-biocgenerics r-bioc-biocio 79s r-bioc-biocparallel r-bioc-biocviews r-bioc-biostrings r-bioc-delayedarray 79s r-bioc-deseq2 r-bioc-genomeinfodb r-bioc-genomeinfodbdata 79s r-bioc-genomicalignments r-bioc-genomicranges r-bioc-graph 79s r-bioc-hsmmsinglecell r-bioc-iranges r-bioc-limma r-bioc-matrixgenerics 79s r-bioc-monocle r-bioc-multtest r-bioc-rbgl r-bioc-rhtslib r-bioc-rsamtools 79s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors 79s r-bioc-singlecellexperiment r-bioc-sparsearray r-bioc-summarizedexperiment 79s r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-ape 79s r-cran-askpass r-cran-base64enc r-cran-beeswarm r-cran-bh r-cran-biocmanager 79s r-cran-bit r-cran-bit64 r-cran-bitops r-cran-brio r-cran-bslib r-cran-cachem 79s r-cran-cairo r-cran-callr r-cran-caret r-cran-catools r-cran-class 79s r-cran-cli r-cran-clock r-cran-cluster r-cran-codetools r-cran-colorspace 79s r-cran-colourpicker r-cran-combinat r-cran-commonmark r-cran-conquer 79s r-cran-cowplot r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl 79s r-cran-data.table r-cran-ddrtree r-cran-deldir r-cran-deoptimr r-cran-desc 79s r-cran-diagram r-cran-diffobj r-cran-digest r-cran-dotcall64 r-cran-dplyr 79s r-cran-dqrng r-cran-e1071 r-cran-evaluate r-cran-fansi r-cran-farver 79s r-cran-fastdummies r-cran-fastica r-cran-fastmap r-cran-fitdistrplus 79s r-cran-fnn r-cran-fontawesome r-cran-foreach r-cran-formatr r-cran-fs 79s r-cran-futile.logger r-cran-futile.options r-cran-future r-cran-future.apply 79s r-cran-gdata r-cran-generics r-cran-ggbeeswarm r-cran-ggplot2 r-cran-ggrastr 79s r-cran-ggrepel r-cran-ggridges r-cran-globals r-cran-glue r-cran-goftest 79s r-cran-gower r-cran-gplots r-cran-gridextra r-cran-gtable r-cran-gtools 79s r-cran-hardhat r-cran-hdf5r r-cran-here r-cran-highr r-cran-htmltools 79s r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-ica r-cran-igraph 79s r-cran-ipred r-cran-irlba r-cran-isoband r-cran-iterators r-cran-jquerylib 79s r-cran-jsonlite r-cran-kernlab r-cran-kernsmooth r-cran-knitr 79s r-cran-labeling r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lava 79s r-cran-lazyeval r-cran-leiden r-cran-leidenbase r-cran-lifecycle 79s r-cran-listenv r-cran-littler r-cran-lmtest r-cran-locfit r-cran-lubridate 79s r-cran-magrittr r-cran-mass r-cran-mathjaxr r-cran-matrix 79s r-cran-matrixmodels r-cran-matrixstats r-cran-memoise r-cran-metap 79s r-cran-mgcv r-cran-mime r-cran-miniui r-cran-mixtools r-cran-mnormt 79s r-cran-modelmetrics r-cran-multcomp r-cran-munsell r-cran-mutoss 79s r-cran-mvtnorm r-cran-nlme r-cran-nnet r-cran-numderiv r-cran-openssl 79s r-cran-parallelly r-cran-patchwork r-cran-pbapply r-cran-pheatmap 79s r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 79s r-cran-pkgload r-cran-plotly r-cran-plotrix r-cran-plyr r-cran-png 79s r-cran-polyclip r-cran-praise r-cran-proc r-cran-processx r-cran-prodlim 79s r-cran-progressr r-cran-promises r-cran-proxy r-cran-ps r-cran-purrr 79s r-cran-qqconf r-cran-quantreg r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils 79s r-cran-r6 r-cran-ragg r-cran-rann r-cran-rappdirs r-cran-rbibutils 79s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppannoy r-cran-rcpparmadillo 79s r-cran-rcppeigen r-cran-rcpphnsw r-cran-rcppprogress r-cran-rcpptoml 79s r-cran-rcurl r-cran-rdpack r-cran-recipes r-cran-reshape2 r-cran-restfulr 79s r-cran-reticulate r-cran-rjson r-cran-rlang r-cran-rmarkdown 79s r-cran-robustbase r-cran-rocr r-cran-rpart r-cran-rprojroot r-cran-rspectra 79s r-cran-rsvd r-cran-rtsne r-cran-runit r-cran-sandwich r-cran-sass 79s r-cran-scales r-cran-scattermore r-cran-sctransform r-cran-segmented 79s r-cran-seurat r-cran-seuratobject r-cran-shape r-cran-shiny r-cran-shinyjs 79s r-cran-sitmo r-cran-slam r-cran-sn r-cran-snow r-cran-sourcetools r-cran-sp 79s r-cran-spam r-cran-sparsem r-cran-spatstat.data r-cran-spatstat.explore 79s r-cran-spatstat.geom r-cran-spatstat.random r-cran-spatstat.sparse 79s r-cran-spatstat.utils r-cran-squarem r-cran-statmod r-cran-stringi 79s r-cran-stringr r-cran-survival r-cran-sys r-cran-systemfonts r-cran-tensor 79s r-cran-testthat r-cran-textshaping r-cran-tfisher r-cran-th.data 79s r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-timechange 79s r-cran-timedate r-cran-tinytex r-cran-tzdb r-cran-utf8 r-cran-uwot 79s r-cran-vctrs r-cran-vgam r-cran-vipor r-cran-viridis r-cran-viridislite 79s r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml r-cran-xtable r-cran-yaml 79s r-cran-zoo unzip x11-common xdg-utils zip zlib1g-dev 79s 0 upgraded, 371 newly installed, 0 to remove and 0 not upgraded. 79s Need to get 415 MB of archives. 79s After this operation, 1098 MB of additional disk space will be used. 79s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 80s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 80s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB] 80s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB] 80s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB] 80s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 80s Get:7 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 80s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 80s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 11+nmu1 [5936 B] 80s Get:10 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 80s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-17ubuntu1 [148 kB] 80s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libsuitesparseconfig7 amd64 1:7.8.3+dfsg-3 [13.5 kB] 80s Get:13 http://ftpmaster.internal/ubuntu plucky/universe amd64 libamd3 amd64 1:7.8.3+dfsg-3 [31.0 kB] 80s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 14.2.0-17ubuntu1 [2998 kB] 80s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 80s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 14.2.0-17ubuntu1 [28.9 kB] 80s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 14.2.0-17ubuntu1 [1317 kB] 80s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 14.2.0-17ubuntu1 [2733 kB] 81s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 14.2.0-17ubuntu1 [1177 kB] 81s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 14.2.0-17ubuntu1 [1634 kB] 81s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 14.2.0-17ubuntu1 [153 kB] 81s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-17ubuntu1 [2814 kB] 81s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-17ubuntu1 [2507 kB] 81s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost1.83-dev amd64 1.83.0-4.1ubuntu1 [10.7 MB] 82s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost-dev amd64 1.83.0.2ubuntu1 [4468 B] 82s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 82s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 82s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 82s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 82s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 82s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libcolamd3 amd64 1:7.8.3+dfsg-3 [19.5 kB] 82s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 82s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB] 82s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libfftw3-double3 amd64 3.3.10-2fakesync1build1 [839 kB] 82s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-17ubuntu1 [910 kB] 82s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl7 amd64 2.5.4-3build1 [46.2 kB] 82s Get:37 http://ftpmaster.internal/ubuntu plucky/universe amd64 libglpk40 amd64 5.0-1build2 [369 kB] 82s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 82s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB] 82s Get:40 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 82s Get:41 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-310 amd64 1.14.5+repack-3 [1519 kB] 82s Get:42 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-310 amd64 1.14.5+repack-3 [62.6 kB] 82s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 82s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 82s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 82s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 82s Get:47 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 82s Get:48 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 82s Get:49 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 82s Get:50 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 82s Get:51 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 82s Get:52 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 82s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 82s Get:54 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 82s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 82s Get:56 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 82s Get:57 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 82s Get:58 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 82s Get:59 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 82s Get:60 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 82s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 82s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 82s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 liblua5.4-0 amd64 5.4.7-1 [196 kB] 82s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 82s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 82s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.56.1-1 [255 kB] 82s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.56.1-1 [52.6 kB] 82s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.56.1-1 [29.1 kB] 82s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB] 82s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB] 82s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 82s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 82s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB] 82s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 82s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 82s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 82s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 82s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 82s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB] 82s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 82s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu2 [185 kB] 82s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 82s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 82s Get:84 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.2-1build1 [28.9 MB] 83s Get:85 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-2 [96.6 kB] 83s Get:86 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-2 [2554 B] 83s Get:87 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 83s Get:88 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 83s Get:89 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 83s Get:90 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 83s Get:91 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc amd64 3.1.11.1+ds-2 [27.2 MB] 84s Get:92 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 84s Get:93 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biobase amd64 2.66.0-2 [2332 kB] 84s Get:94 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2065 kB] 84s Get:95 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 84s Get:96 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-formatr all 1.14-2 [152 kB] 84s Get:97 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 84s Get:98 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 84s Get:99 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 84s Get:100 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 84s Get:101 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-codetools all 0.2-20-1 [90.5 kB] 85s Get:102 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bh all 1.84.0-1 [5962 B] 85s Get:103 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cpp11 all 0.5.1-1 [233 kB] 85s Get:104 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocparallel amd64 1.40.0-2 [1337 kB] 85s Get:105 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-graph amd64 1.84.1-1 [1298 kB] 85s Get:106 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rbgl amd64 1.82.0+dfsg-2 [588 kB] 85s Get:107 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xml amd64 3.99-0.18-1 [1748 kB] 85s Get:108 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bitops amd64 1.0-9-1 [30.3 kB] 85s Get:109 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcurl amd64 1.98-1.16+dfsg-1 [807 kB] 85s Get:110 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-runit all 0.4.33-1 [377 kB] 85s Get:111 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 85s Get:112 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocviews all 1.74.0-2 [670 kB] 85s Get:113 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-iranges amd64 2.40.1-2 [2310 kB] 85s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 85s Get:115 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 85s Get:116 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-xvector amd64 0.46.0-2 [620 kB] 85s Get:117 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-curl amd64 6.1.0+dfsg-1 [195 kB] 86s Get:118 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.8.9+dfsg-1 [445 kB] 86s Get:119 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 86s Get:120 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB] 86s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB] 86s Get:122 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-openssl amd64 2.2.0+dfsg-1 [405 kB] 86s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB] 86s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 86s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 86s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 86s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 86s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB] 86s Get:129 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biostrings amd64 2.74.1+dfsg-2 [13.3 MB] 87s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 87s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrix amd64 1.7-2-1 [4456 kB] 87s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixstats amd64 1.5.0-1 [542 kB] 87s Get:133 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 87s Get:134 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-abind all 1.4-8-1 [66.9 kB] 87s Get:135 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-s4arrays amd64 1.6.0+dfsg-2 [698 kB] 87s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-sparsearray amd64 1.6.1+dfsg-1 [1391 kB] 87s Get:137 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-delayedarray amd64 0.32.0+dfsg-2 [2064 kB] 88s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomicranges amd64 1.58.0+dfsg-2 [2083 kB] 88s Get:139 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 88s Get:140 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-locfit amd64 1.5-9.11-1 [550 kB] 88s Get:141 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.3-1 [1348 kB] 88s Get:142 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 88s Get:143 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.5-1 [1719 kB] 88s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 88s Get:145 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 88s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 88s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mass amd64 7.3-64-1 [1114 kB] 88s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nlme amd64 3.1.167-1 [2320 kB] 88s Get:149 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB] 88s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB] 88s Get:151 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 88s Get:152 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colorspace amd64 2.1-1+dfsg-1 [1563 kB] 88s Get:153 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-munsell all 0.5.1-1 [213 kB] 88s Get:154 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 88s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridislite all 0.4.2-2 [1088 kB] 88s Get:156 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scales all 1.3.0-1 [603 kB] 89s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 89s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 89s Get:159 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 89s Get:160 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 89s Get:161 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 89s Get:162 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 89s Get:163 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB] 89s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 89s Get:165 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 89s Get:166 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 89s Get:167 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.14-1 [1998 kB] 89s Get:168 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpparmadillo amd64 14.2.3-1-1 [864 kB] 89s Get:169 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-deseq2 amd64 1.46.0+dfsg-2 [1250 kB] 90s Get:170 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rhtslib amd64 3.2.0+dfsg-2 [1499 kB] 90s Get:171 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rsamtools amd64 2.22.0+dfsg-2 [3745 kB] 90s Get:172 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomicalignments amd64 1.42.0-2 [2165 kB] 90s Get:173 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-hsmmsinglecell all 1.26.0-2 [16.7 MB] 92s Get:174 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-statmod amd64 1.5.0-1 [295 kB] 92s Get:175 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-limma amd64 3.62.2+dfsg-1 [1969 kB] 92s Get:176 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vgam amd64 1.1-12-1 [7658 kB] 92s Get:177 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-irlba amd64 2.3.5.1-4 [295 kB] 92s Get:178 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1428 kB] 92s Get:179 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ddrtree amd64 0.1.5-2 [154 kB] 92s Get:180 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-igraph amd64 2.1.4-1 [5357 kB] 93s Get:181 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB] 93s Get:182 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cluster amd64 2.1.8-1 [579 kB] 93s Get:183 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-combinat all 0.0-8-7build1 [43.1 kB] 93s Get:184 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastica amd64 1.2-7-1 [46.6 kB] 93s Get:185 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rtsne amd64 0.17-1 [109 kB] 93s Get:186 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringi amd64 1.8.4-1build1 [927 kB] 93s Get:187 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 93s Get:188 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reshape2 amd64 1.4.4-2build1 [114 kB] 93s Get:189 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-leidenbase amd64 0.1.31-1 [2513 kB] 93s Get:190 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB] 93s Get:191 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB] 93s Get:192 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB] 93s Get:193 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pheatmap all 1.0.12-2build1 [78.2 kB] 93s Get:194 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB] 93s Get:195 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-slam amd64 0.1-55-1 [188 kB] 93s Get:196 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gridextra all 2.3-3build1 [1024 kB] 93s Get:197 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridis all 0.6.5-1 [2770 kB] 93s Get:198 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rann amd64 2.6.2-1 [46.3 kB] 93s Get:199 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-monocle amd64 2.34.0-2 [1522 kB] 94s Get:200 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-survival amd64 3.8-3-1 [8239 kB] 94s Get:201 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-multtest amd64 2.62.0-2 [844 kB] 94s Get:202 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rjson amd64 0.2.23-1 [104 kB] 95s Get:203 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB] 95s Get:204 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-restfulr amd64 0.0.15-1 [380 kB] 95s Get:205 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rtracklayer amd64 1.66.0-2 [5227 kB] 96s Get:206 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-singlecellexperiment all 1.28.1+ds-2 [829 kB] 96s Get:207 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB] 96s Get:208 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ape amd64 5.8-1-1 [2918 kB] 96s Get:209 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 96s Get:210 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-beeswarm amd64 0.4.0-1 [82.3 kB] 96s Get:211 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bit amd64 4.5.0.1-1 [1120 kB] 96s Get:212 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bit64 amd64 4.0.5-1 [465 kB] 96s Get:213 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 96s Get:214 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 96s Get:215 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 96s Get:216 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 96s Get:217 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 96s Get:218 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 96s Get:219 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB] 96s Get:220 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 96s Get:221 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 96s Get:222 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 97s Get:223 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cairo amd64 1.6-2-1 [88.8 kB] 97s Get:224 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ps amd64 1.8.1-1 [397 kB] 97s Get:225 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-processx amd64 3.8.5-1 [356 kB] 97s Get:226 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 97s Get:227 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-class amd64 7.3-23-1 [92.7 kB] 97s Get:228 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-e1071 amd64 1.7-16-1 [565 kB] 97s Get:229 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-iterators all 1.0.14-1 [336 kB] 97s Get:230 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-foreach all 1.5.2-1 [124 kB] 97s Get:231 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-data.table amd64 1.16.4+dfsg-1 [2032 kB] 97s Get:232 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-modelmetrics amd64 1.2.2.2-1build1 [128 kB] 97s Get:233 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proc amd64 1.18.5-1 [966 kB] 97s Get:234 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tzdb amd64 0.4.0-2 [521 kB] 97s Get:235 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-clock amd64 0.7.1-1 [1804 kB] 97s Get:236 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gower amd64 1.0.2-1 [210 kB] 97s Get:237 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-hardhat all 1.4.0+dfsg-1 [565 kB] 97s Get:238 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rpart amd64 4.1.24-1 [670 kB] 97s Get:239 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nnet amd64 7.3-20-1 [116 kB] 97s Get:240 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shape all 1.4.6.1-1 [749 kB] 97s Get:241 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diagram all 1.6.5-2 [656 kB] 97s Get:242 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernsmooth amd64 2.23-26-1 [94.5 kB] 97s Get:243 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-globals all 0.16.3-1 [120 kB] 97s Get:244 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-listenv all 0.9.1+dfsg-1 [112 kB] 97s Get:245 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-parallelly amd64 1.42.0-1 [540 kB] 98s Get:246 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-future all 1.34.0+dfsg-1 [646 kB] 98s Get:247 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-future.apply all 1.11.3+dfsg-1 [175 kB] 98s Get:248 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-numderiv all 2016.8-1.1-3 [115 kB] 98s Get:249 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-progressr all 0.15.1-1 [353 kB] 98s Get:250 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-squarem all 2021.1-1 [179 kB] 98s Get:251 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lava all 1.8.1+dfsg-1 [2191 kB] 98s Get:252 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-prodlim amd64 2024.06.25-1 [415 kB] 98s Get:253 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ipred amd64 0.9-15-1 [386 kB] 98s Get:254 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-timechange amd64 0.3.0-1 [178 kB] 98s Get:255 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lubridate amd64 1.9.4+dfsg-1 [1009 kB] 98s Get:256 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-purrr amd64 1.0.2-1 [502 kB] 98s Get:257 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 98s Get:258 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-timedate amd64 4041.110-1 [1208 kB] 98s Get:259 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-recipes all 1.1.0+dfsg-1 [2035 kB] 98s Get:260 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-caret amd64 7.0-1+dfsg-1 [3460 kB] 98s Get:261 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-catools amd64 1.18.2-1 [201 kB] 98s Get:262 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 1.0.3-1 [114 kB] 98s Get:263 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xfun amd64 0.50+dfsg-1 [568 kB] 98s Get:264 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 98s Get:265 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 99s Get:266 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 99s Get:267 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 99s Get:268 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tinytex all 0.54-1 [147 kB] 99s Get:269 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-modernizr all 3.13.0-0.1 [101 kB] 99s Get:270 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB] 99s Get:271 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB] 99s Get:272 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 99s Get:273 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 99s Get:274 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 99s Get:275 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.2-2 [137 kB] 99s Get:276 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 99s Get:277 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 99s Get:278 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 99s Get:279 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 99s Get:280 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-miniui all 0.1.1.1-3build1 [36.1 kB] 99s Get:281 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shinyjs all 2.1.0-1 [967 kB] 99s Get:282 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colourpicker all 1.3.0+dfsg-1 [1191 kB] 100s Get:283 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-conquer amd64 1.3.3-1 [499 kB] 100s Get:284 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cowplot all 1.1.3+dfsg-1 [614 kB] 100s Get:285 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lazyeval amd64 0.2.2-1build1 [144 kB] 100s Get:286 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 100s Get:287 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-deldir amd64 2.0-4-1build1 [270 kB] 100s Get:288 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-deoptimr all 1.1-3-1-1 [76.6 kB] 100s Get:289 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 100s Get:290 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 100s Get:291 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dotcall64 amd64 1.2-1 [36.8 kB] 100s Get:292 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sitmo amd64 2.0.2-1 [130 kB] 100s Get:293 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dqrng amd64 0.3.2+dfsg-1 [161 kB] 100s Get:294 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastdummies all 1.7.5-1 [51.1 kB] 100s Get:295 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fitdistrplus all 1.2-2-1 [2287 kB] 100s Get:296 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fnn amd64 1.1.4.1-1 [126 kB] 100s Get:297 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtools amd64 3.9.5-1 [340 kB] 100s Get:298 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gdata all 3.0.1-1 [491 kB] 100s Get:299 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vipor all 0.4.7-1 [4624 kB] 100s Get:300 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggbeeswarm all 0.7.2-1 [1732 kB] 100s Get:301 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-png amd64 0.1-8-1build2 [40.6 kB] 100s Get:302 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-systemfonts amd64 1.2.1-1 [347 kB] 100s Get:303 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-textshaping amd64 0.3.7-2 [95.5 kB] 101s Get:304 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ragg amd64 1.3.3-1 [510 kB] 101s Get:305 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggrastr all 1.0.2-1 [2566 kB] 101s Get:306 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggrepel amd64 0.9.6-1 [270 kB] 101s Get:307 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggridges all 0.5.6-1 [2195 kB] 101s Get:308 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-goftest amd64 1.2-3-1 [59.5 kB] 101s Get:309 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gplots all 3.2.0-1 [484 kB] 101s Get:310 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-hdf5r amd64 1.3.12+dfsg-1 [1985 kB] 102s Get:311 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rprojroot all 2.0.4-2 [125 kB] 102s Get:312 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-here all 1.0.1-2 [50.3 kB] 102s Get:313 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ica all 1.0-3-1 [85.4 kB] 102s Get:314 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernlab amd64 0.9-33-1 [1947 kB] 102s Get:315 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpptoml amd64 0.2.2+dfsg-1 [110 kB] 102s Get:316 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reticulate amd64 1.39.0+dfsg-1 [1238 kB] 102s Get:317 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-leiden all 0.4.3.1+dfsg-1 [71.9 kB] 102s Get:318 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-zoo amd64 1.8-12-2 [984 kB] 102s Get:319 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lmtest amd64 0.9.40-1 [396 kB] 102s Get:320 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mathjaxr all 1.6-0-1 [605 kB] 102s Get:321 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixmodels all 0.5-3-1 [361 kB] 102s Get:322 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rbibutils amd64 2.3-1 [1023 kB] 102s Get:323 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rdpack all 2.6.2-1 [757 kB] 102s Get:324 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mnormt amd64 2.1.1-2 [170 kB] 102s Get:325 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sparsem amd64 1.84-2-1 [813 kB] 102s Get:326 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-quantreg amd64 6.00-1 [1454 kB] 102s Get:327 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sn all 2.1.1-2 [1815 kB] 102s Get:328 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mvtnorm amd64 1.3-3-1 [923 kB] 102s Get:329 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tfisher all 0.2.0-3 [79.8 kB] 102s Get:330 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plotrix all 3.8-4-1 [1120 kB] 102s Get:331 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-th.data all 1.1-3-1 [8723 kB] 102s Get:332 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sandwich all 3.1-1-1 [1483 kB] 103s Get:333 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-multcomp all 1.4-28-1 [700 kB] 103s Get:334 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mutoss all 0.1-13-1 [1123 kB] 103s Get:335 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-robustbase amd64 0.99-4-1-1 [3038 kB] 103s Get:336 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-qqconf amd64 1.3.2+dfsg-1 [157 kB] 103s Get:337 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-metap all 1.11-2 [570 kB] 103s Get:338 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plotly all 4.10.4+dfsg-2 [3666 kB] 103s Get:339 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-segmented all 2.1-3-1 [1366 kB] 103s Get:340 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mixtools amd64 2.0.0-1 [1399 kB] 103s Get:341 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-patchwork all 1.3.0-1 [3220 kB] 103s Get:342 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pbapply all 1.7-2-1 [102 kB] 103s Get:343 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgbuild all 1.4.6-1 [213 kB] 103s Get:344 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgload all 1.4.0-1 [247 kB] 103s Get:345 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-polyclip amd64 1.10-7-1 [116 kB] 103s Get:346 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 103s Get:347 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 103s Get:348 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.oo all 1.27.0-1 [979 kB] 103s Get:349 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.utils all 2.12.3-1 [1386 kB] 103s Get:350 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppannoy amd64 0.0.22-1 [235 kB] 103s Get:351 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpphnsw amd64 0.6.0+ds-1 [185 kB] 103s Get:352 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppprogress all 0.4.2-2build1 [22.0 kB] 103s Get:353 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rocr all 1.0-11-3 [456 kB] 103s Get:354 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rspectra amd64 0.16-2-1 [448 kB] 103s Get:355 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rsvd all 1.0.5-1 [3589 kB] 103s Get:356 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scattermore amd64 1.2-1 [331 kB] 103s Get:357 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sctransform amd64 0.4.1-1 [504 kB] 103s Get:358 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sp amd64 1:2.1-4+dfsg-1 [1472 kB] 103s Get:359 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spam amd64 2.11-1-1 [2756 kB] 104s Get:360 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-seuratobject amd64 5.0.2-1 [1744 kB] 104s Get:361 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.utils amd64 3.1-2-1 [383 kB] 104s Get:362 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.data all 3.1-4-1 [4047 kB] 104s Get:363 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.geom amd64 3.2-9-2 [3946 kB] 104s Get:364 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.random amd64 3.2-3-1 [1169 kB] 104s Get:365 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tensor all 1.5-4 [15.7 kB] 104s Get:366 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.sparse amd64 3.1-0-1 [221 kB] 104s Get:367 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.explore amd64 3.2-7-1 [3432 kB] 104s Get:368 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-uwot amd64 0.2.2-2 [1044 kB] 104s Get:369 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-seurat amd64 5.0.1-1 [3543 kB] 104s Get:370 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-waldo all 0.6.1-2 [150 kB] 104s Get:371 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-testthat amd64 3.2.1.1-1 [1636 kB] 105s Preconfiguring packages ... 105s Fetched 415 MB in 25s (16.4 MB/s) 105s Selecting previously unselected package fonts-dejavu-mono. 105s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108916 files and directories currently installed.) 105s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8_all.deb ... 105s Unpacking fonts-dejavu-mono (2.37-8) ... 105s Selecting previously unselected package fonts-dejavu-core. 105s Preparing to unpack .../001-fonts-dejavu-core_2.37-8_all.deb ... 105s Unpacking fonts-dejavu-core (2.37-8) ... 105s Selecting previously unselected package fontconfig-config. 105s Preparing to unpack .../002-fontconfig-config_2.15.0-1.1ubuntu2_amd64.deb ... 105s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 105s Selecting previously unselected package libfontconfig1:amd64. 105s Preparing to unpack .../003-libfontconfig1_2.15.0-1.1ubuntu2_amd64.deb ... 105s Unpacking libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ... 106s Selecting previously unselected package fontconfig. 106s Preparing to unpack .../004-fontconfig_2.15.0-1.1ubuntu2_amd64.deb ... 106s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 106s Selecting previously unselected package fonts-font-awesome. 106s Preparing to unpack .../005-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 106s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 106s Selecting previously unselected package fonts-glyphicons-halflings. 106s Preparing to unpack .../006-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 106s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 106s Selecting previously unselected package fonts-mathjax. 106s Preparing to unpack .../007-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 106s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 106s Selecting previously unselected package javascript-common. 106s Preparing to unpack .../008-javascript-common_11+nmu1_all.deb ... 106s Unpacking javascript-common (11+nmu1) ... 106s Selecting previously unselected package libaec0:amd64. 106s Preparing to unpack .../009-libaec0_1.1.3-1_amd64.deb ... 106s Unpacking libaec0:amd64 (1.1.3-1) ... 106s Selecting previously unselected package libgomp1:amd64. 106s Preparing to unpack .../010-libgomp1_14.2.0-17ubuntu1_amd64.deb ... 106s Unpacking libgomp1:amd64 (14.2.0-17ubuntu1) ... 106s Selecting previously unselected package libsuitesparseconfig7:amd64. 106s Preparing to unpack .../011-libsuitesparseconfig7_1%3a7.8.3+dfsg-3_amd64.deb ... 106s Unpacking libsuitesparseconfig7:amd64 (1:7.8.3+dfsg-3) ... 106s Selecting previously unselected package libamd3:amd64. 106s Preparing to unpack .../012-libamd3_1%3a7.8.3+dfsg-3_amd64.deb ... 106s Unpacking libamd3:amd64 (1:7.8.3+dfsg-3) ... 106s Selecting previously unselected package libasan8:amd64. 106s Preparing to unpack .../013-libasan8_14.2.0-17ubuntu1_amd64.deb ... 106s Unpacking libasan8:amd64 (14.2.0-17ubuntu1) ... 106s Selecting previously unselected package libblas3:amd64. 106s Preparing to unpack .../014-libblas3_3.12.1-2_amd64.deb ... 106s Unpacking libblas3:amd64 (3.12.1-2) ... 106s Selecting previously unselected package libitm1:amd64. 106s Preparing to unpack .../015-libitm1_14.2.0-17ubuntu1_amd64.deb ... 106s Unpacking libitm1:amd64 (14.2.0-17ubuntu1) ... 106s Selecting previously unselected package liblsan0:amd64. 106s Preparing to unpack .../016-liblsan0_14.2.0-17ubuntu1_amd64.deb ... 106s Unpacking liblsan0:amd64 (14.2.0-17ubuntu1) ... 106s Selecting previously unselected package libtsan2:amd64. 106s Preparing to unpack .../017-libtsan2_14.2.0-17ubuntu1_amd64.deb ... 106s Unpacking libtsan2:amd64 (14.2.0-17ubuntu1) ... 106s Selecting previously unselected package libubsan1:amd64. 106s Preparing to unpack .../018-libubsan1_14.2.0-17ubuntu1_amd64.deb ... 106s Unpacking libubsan1:amd64 (14.2.0-17ubuntu1) ... 106s Selecting previously unselected package libhwasan0:amd64. 106s Preparing to unpack .../019-libhwasan0_14.2.0-17ubuntu1_amd64.deb ... 106s Unpacking libhwasan0:amd64 (14.2.0-17ubuntu1) ... 106s Selecting previously unselected package libquadmath0:amd64. 106s Preparing to unpack .../020-libquadmath0_14.2.0-17ubuntu1_amd64.deb ... 106s Unpacking libquadmath0:amd64 (14.2.0-17ubuntu1) ... 106s Selecting previously unselected package libgcc-14-dev:amd64. 106s Preparing to unpack .../021-libgcc-14-dev_14.2.0-17ubuntu1_amd64.deb ... 106s Unpacking libgcc-14-dev:amd64 (14.2.0-17ubuntu1) ... 106s Selecting previously unselected package libstdc++-14-dev:amd64. 106s Preparing to unpack .../022-libstdc++-14-dev_14.2.0-17ubuntu1_amd64.deb ... 106s Unpacking libstdc++-14-dev:amd64 (14.2.0-17ubuntu1) ... 107s Selecting previously unselected package libboost1.83-dev:amd64. 107s Preparing to unpack .../023-libboost1.83-dev_1.83.0-4.1ubuntu1_amd64.deb ... 107s Unpacking libboost1.83-dev:amd64 (1.83.0-4.1ubuntu1) ... 108s Selecting previously unselected package libboost-dev:amd64. 108s Preparing to unpack .../024-libboost-dev_1.83.0.2ubuntu1_amd64.deb ... 108s Unpacking libboost-dev:amd64 (1.83.0.2ubuntu1) ... 109s Selecting previously unselected package libpixman-1-0:amd64. 109s Preparing to unpack .../025-libpixman-1-0_0.44.0-3_amd64.deb ... 109s Unpacking libpixman-1-0:amd64 (0.44.0-3) ... 109s Selecting previously unselected package libxcb-render0:amd64. 109s Preparing to unpack .../026-libxcb-render0_1.17.0-2_amd64.deb ... 109s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 109s Selecting previously unselected package libxcb-shm0:amd64. 109s Preparing to unpack .../027-libxcb-shm0_1.17.0-2_amd64.deb ... 109s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 109s Selecting previously unselected package libxrender1:amd64. 109s Preparing to unpack .../028-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 109s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 109s Selecting previously unselected package libcairo2:amd64. 109s Preparing to unpack .../029-libcairo2_1.18.2-2_amd64.deb ... 109s Unpacking libcairo2:amd64 (1.18.2-2) ... 109s Selecting previously unselected package libcolamd3:amd64. 109s Preparing to unpack .../030-libcolamd3_1%3a7.8.3+dfsg-3_amd64.deb ... 109s Unpacking libcolamd3:amd64 (1:7.8.3+dfsg-3) ... 109s Selecting previously unselected package libdatrie1:amd64. 109s Preparing to unpack .../031-libdatrie1_0.2.13-3build1_amd64.deb ... 109s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 109s Selecting previously unselected package libdeflate0:amd64. 109s Preparing to unpack .../032-libdeflate0_1.23-1_amd64.deb ... 109s Unpacking libdeflate0:amd64 (1.23-1) ... 109s Selecting previously unselected package libfftw3-double3:amd64. 109s Preparing to unpack .../033-libfftw3-double3_3.3.10-2fakesync1build1_amd64.deb ... 109s Unpacking libfftw3-double3:amd64 (3.3.10-2fakesync1build1) ... 109s Selecting previously unselected package libgfortran5:amd64. 109s Preparing to unpack .../034-libgfortran5_14.2.0-17ubuntu1_amd64.deb ... 109s Unpacking libgfortran5:amd64 (14.2.0-17ubuntu1) ... 109s Selecting previously unselected package libltdl7:amd64. 109s Preparing to unpack .../035-libltdl7_2.5.4-3build1_amd64.deb ... 109s Unpacking libltdl7:amd64 (2.5.4-3build1) ... 109s Selecting previously unselected package libglpk40:amd64. 109s Preparing to unpack .../036-libglpk40_5.0-1build2_amd64.deb ... 109s Unpacking libglpk40:amd64 (5.0-1build2) ... 109s Selecting previously unselected package libgraphite2-3:amd64. 109s Preparing to unpack .../037-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 109s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 109s Selecting previously unselected package libharfbuzz0b:amd64. 109s Preparing to unpack .../038-libharfbuzz0b_10.2.0-1_amd64.deb ... 109s Unpacking libharfbuzz0b:amd64 (10.2.0-1) ... 109s Selecting previously unselected package libsz2:amd64. 109s Preparing to unpack .../039-libsz2_1.1.3-1_amd64.deb ... 109s Unpacking libsz2:amd64 (1.1.3-1) ... 109s Selecting previously unselected package libhdf5-310:amd64. 109s Preparing to unpack .../040-libhdf5-310_1.14.5+repack-3_amd64.deb ... 109s Unpacking libhdf5-310:amd64 (1.14.5+repack-3) ... 109s Selecting previously unselected package libhdf5-hl-310:amd64. 109s Preparing to unpack .../041-libhdf5-hl-310_1.14.5+repack-3_amd64.deb ... 109s Unpacking libhdf5-hl-310:amd64 (1.14.5+repack-3) ... 109s Selecting previously unselected package x11-common. 109s Preparing to unpack .../042-x11-common_1%3a7.7+23ubuntu3_all.deb ... 109s Unpacking x11-common (1:7.7+23ubuntu3) ... 109s Selecting previously unselected package libice6:amd64. 109s Preparing to unpack .../043-libice6_2%3a1.1.1-1_amd64.deb ... 109s Unpacking libice6:amd64 (2:1.1.1-1) ... 109s Selecting previously unselected package libjpeg-turbo8:amd64. 109s Preparing to unpack .../044-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ... 109s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 109s Selecting previously unselected package libjpeg8:amd64. 109s Preparing to unpack .../045-libjpeg8_8c-2ubuntu11_amd64.deb ... 109s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 109s Selecting previously unselected package libjs-bootstrap. 109s Preparing to unpack .../046-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 109s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 110s Selecting previously unselected package libjs-popper.js. 110s Preparing to unpack .../047-libjs-popper.js_1.16.1+ds-6_all.deb ... 110s Unpacking libjs-popper.js (1.16.1+ds-6) ... 110s Selecting previously unselected package libjs-bootstrap4. 110s Preparing to unpack .../048-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 110s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 110s Selecting previously unselected package libjs-d3. 110s Preparing to unpack .../049-libjs-d3_3.5.17-4_all.deb ... 110s Unpacking libjs-d3 (3.5.17-4) ... 110s Selecting previously unselected package libjs-es5-shim. 110s Preparing to unpack .../050-libjs-es5-shim_4.6.7-2_all.deb ... 110s Unpacking libjs-es5-shim (4.6.7-2) ... 110s Selecting previously unselected package libjs-highlight.js. 110s Preparing to unpack .../051-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 110s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 110s Selecting previously unselected package libjs-jquery. 110s Preparing to unpack .../052-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 110s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 110s Selecting previously unselected package libjs-jquery-datatables. 110s Preparing to unpack .../053-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 110s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 110s Selecting previously unselected package libjs-sifter.js. 110s Preparing to unpack .../054-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 110s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 110s Selecting previously unselected package libjs-microplugin.js. 110s Preparing to unpack .../055-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 110s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 110s Selecting previously unselected package libjs-jquery-selectize.js. 110s Preparing to unpack .../056-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 110s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 110s Selecting previously unselected package libjs-jquery-ui. 110s Preparing to unpack .../057-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 110s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 110s Selecting previously unselected package libjs-json. 110s Preparing to unpack .../058-libjs-json_0~20221030+~1.0.8-1_all.deb ... 110s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 110s Selecting previously unselected package libjs-prettify. 110s Preparing to unpack .../059-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 110s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 110s Selecting previously unselected package liblapack3:amd64. 110s Preparing to unpack .../060-liblapack3_3.12.1-2_amd64.deb ... 110s Unpacking liblapack3:amd64 (3.12.1-2) ... 110s Selecting previously unselected package liblerc4:amd64. 110s Preparing to unpack .../061-liblerc4_4.0.0+ds-5ubuntu1_amd64.deb ... 110s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 110s Selecting previously unselected package liblua5.4-0:amd64. 110s Preparing to unpack .../062-liblua5.4-0_5.4.7-1_amd64.deb ... 110s Unpacking liblua5.4-0:amd64 (5.4.7-1) ... 110s Selecting previously unselected package libthai-data. 110s Preparing to unpack .../063-libthai-data_0.1.29-2build1_all.deb ... 110s Unpacking libthai-data (0.1.29-2build1) ... 110s Selecting previously unselected package libthai0:amd64. 110s Preparing to unpack .../064-libthai0_0.1.29-2build1_amd64.deb ... 110s Unpacking libthai0:amd64 (0.1.29-2build1) ... 110s Selecting previously unselected package libpango-1.0-0:amd64. 110s Preparing to unpack .../065-libpango-1.0-0_1.56.1-1_amd64.deb ... 110s Unpacking libpango-1.0-0:amd64 (1.56.1-1) ... 110s Selecting previously unselected package libpangoft2-1.0-0:amd64. 110s Preparing to unpack .../066-libpangoft2-1.0-0_1.56.1-1_amd64.deb ... 110s Unpacking libpangoft2-1.0-0:amd64 (1.56.1-1) ... 110s Selecting previously unselected package libpangocairo-1.0-0:amd64. 110s Preparing to unpack .../067-libpangocairo-1.0-0_1.56.1-1_amd64.deb ... 110s Unpacking libpangocairo-1.0-0:amd64 (1.56.1-1) ... 110s Selecting previously unselected package libpaper2:amd64. 110s Preparing to unpack .../068-libpaper2_2.2.5-0.3_amd64.deb ... 110s Unpacking libpaper2:amd64 (2.2.5-0.3) ... 110s Selecting previously unselected package libpaper-utils. 110s Preparing to unpack .../069-libpaper-utils_2.2.5-0.3_amd64.deb ... 110s Unpacking libpaper-utils (2.2.5-0.3) ... 110s Selecting previously unselected package libsharpyuv0:amd64. 110s Preparing to unpack .../070-libsharpyuv0_1.5.0-0.1_amd64.deb ... 110s Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ... 110s Selecting previously unselected package libsm6:amd64. 110s Preparing to unpack .../071-libsm6_2%3a1.2.4-1_amd64.deb ... 110s Unpacking libsm6:amd64 (2:1.2.4-1) ... 111s Selecting previously unselected package libtcl8.6:amd64. 111s Preparing to unpack .../072-libtcl8.6_8.6.16+dfsg-1_amd64.deb ... 111s Unpacking libtcl8.6:amd64 (8.6.16+dfsg-1) ... 111s Selecting previously unselected package libjbig0:amd64. 111s Preparing to unpack .../073-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 111s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 111s Selecting previously unselected package libwebp7:amd64. 111s Preparing to unpack .../074-libwebp7_1.5.0-0.1_amd64.deb ... 111s Unpacking libwebp7:amd64 (1.5.0-0.1) ... 111s Selecting previously unselected package libtiff6:amd64. 111s Preparing to unpack .../075-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ... 111s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 111s Selecting previously unselected package libxft2:amd64. 111s Preparing to unpack .../076-libxft2_2.3.6-1build1_amd64.deb ... 111s Unpacking libxft2:amd64 (2.3.6-1build1) ... 111s Selecting previously unselected package libxss1:amd64. 111s Preparing to unpack .../077-libxss1_1%3a1.2.3-1build3_amd64.deb ... 111s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 111s Selecting previously unselected package libtk8.6:amd64. 111s Preparing to unpack .../078-libtk8.6_8.6.16-1_amd64.deb ... 111s Unpacking libtk8.6:amd64 (8.6.16-1) ... 111s Selecting previously unselected package libxt6t64:amd64. 111s Preparing to unpack .../079-libxt6t64_1%3a1.2.1-1.2build1_amd64.deb ... 111s Unpacking libxt6t64:amd64 (1:1.2.1-1.2build1) ... 111s Selecting previously unselected package zip. 111s Preparing to unpack .../080-zip_3.0-14ubuntu2_amd64.deb ... 111s Unpacking zip (3.0-14ubuntu2) ... 111s Selecting previously unselected package unzip. 111s Preparing to unpack .../081-unzip_6.0-28ubuntu6_amd64.deb ... 111s Unpacking unzip (6.0-28ubuntu6) ... 111s Selecting previously unselected package xdg-utils. 111s Preparing to unpack .../082-xdg-utils_1.2.1-2ubuntu1_all.deb ... 111s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 111s Selecting previously unselected package r-base-core. 111s Preparing to unpack .../083-r-base-core_4.4.2-1build1_amd64.deb ... 111s Unpacking r-base-core (4.4.2-1build1) ... 111s Selecting previously unselected package r-cran-littler. 111s Preparing to unpack .../084-r-cran-littler_0.3.20-2_amd64.deb ... 111s Unpacking r-cran-littler (0.3.20-2) ... 111s Selecting previously unselected package littler. 111s Preparing to unpack .../085-littler_0.3.20-2_all.deb ... 111s Unpacking littler (0.3.20-2) ... 111s Selecting previously unselected package node-bootstrap-sass. 111s Preparing to unpack .../086-node-bootstrap-sass_3.4.3-2_all.deb ... 111s Unpacking node-bootstrap-sass (3.4.3-2) ... 111s Selecting previously unselected package node-html5shiv. 111s Preparing to unpack .../087-node-html5shiv_3.7.3+dfsg-5_all.deb ... 111s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 111s Selecting previously unselected package node-normalize.css. 111s Preparing to unpack .../088-node-normalize.css_8.0.1-5_all.deb ... 111s Unpacking node-normalize.css (8.0.1-5) ... 111s Selecting previously unselected package pandoc-data. 111s Preparing to unpack .../089-pandoc-data_3.1.11.1-3build1_all.deb ... 111s Unpacking pandoc-data (3.1.11.1-3build1) ... 112s Selecting previously unselected package pandoc. 112s Preparing to unpack .../090-pandoc_3.1.11.1+ds-2_amd64.deb ... 112s Unpacking pandoc (3.1.11.1+ds-2) ... 112s Selecting previously unselected package r-bioc-biocgenerics. 112s Preparing to unpack .../091-r-bioc-biocgenerics_0.52.0-2_all.deb ... 112s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 112s Selecting previously unselected package r-bioc-biobase. 112s Preparing to unpack .../092-r-bioc-biobase_2.66.0-2_amd64.deb ... 112s Unpacking r-bioc-biobase (2.66.0-2) ... 112s Selecting previously unselected package r-bioc-s4vectors. 112s Preparing to unpack .../093-r-bioc-s4vectors_0.44.0+dfsg-2_amd64.deb ... 112s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 112s Selecting previously unselected package r-bioc-biocio. 112s Preparing to unpack .../094-r-bioc-biocio_1.16.0+dfsg-2_all.deb ... 112s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ... 112s Selecting previously unselected package r-cran-formatr. 112s Preparing to unpack .../095-r-cran-formatr_1.14-2_all.deb ... 112s Unpacking r-cran-formatr (1.14-2) ... 112s Selecting previously unselected package r-cran-lambda.r. 112s Preparing to unpack .../096-r-cran-lambda.r_1.2.4-2build1_all.deb ... 112s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 113s Selecting previously unselected package r-cran-futile.options. 113s Preparing to unpack .../097-r-cran-futile.options_1.0.1-3build1_all.deb ... 113s Unpacking r-cran-futile.options (1.0.1-3build1) ... 113s Selecting previously unselected package r-cran-futile.logger. 113s Preparing to unpack .../098-r-cran-futile.logger_1.4.3-4build1_all.deb ... 113s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 113s Selecting previously unselected package r-cran-snow. 113s Preparing to unpack .../099-r-cran-snow_1%3a0.4.4-2_all.deb ... 113s Unpacking r-cran-snow (1:0.4.4-2) ... 113s Selecting previously unselected package r-cran-codetools. 113s Preparing to unpack .../100-r-cran-codetools_0.2-20-1_all.deb ... 113s Unpacking r-cran-codetools (0.2-20-1) ... 113s Selecting previously unselected package r-cran-bh. 113s Preparing to unpack .../101-r-cran-bh_1.84.0-1_all.deb ... 113s Unpacking r-cran-bh (1.84.0-1) ... 113s Selecting previously unselected package r-cran-cpp11. 113s Preparing to unpack .../102-r-cran-cpp11_0.5.1-1_all.deb ... 113s Unpacking r-cran-cpp11 (0.5.1-1) ... 113s Selecting previously unselected package r-bioc-biocparallel. 113s Preparing to unpack .../103-r-bioc-biocparallel_1.40.0-2_amd64.deb ... 113s Unpacking r-bioc-biocparallel (1.40.0-2) ... 113s Selecting previously unselected package r-bioc-graph. 113s Preparing to unpack .../104-r-bioc-graph_1.84.1-1_amd64.deb ... 113s Unpacking r-bioc-graph (1.84.1-1) ... 113s Selecting previously unselected package r-bioc-rbgl. 113s Preparing to unpack .../105-r-bioc-rbgl_1.82.0+dfsg-2_amd64.deb ... 113s Unpacking r-bioc-rbgl (1.82.0+dfsg-2) ... 113s Selecting previously unselected package r-cran-xml. 113s Preparing to unpack .../106-r-cran-xml_3.99-0.18-1_amd64.deb ... 113s Unpacking r-cran-xml (3.99-0.18-1) ... 113s Selecting previously unselected package r-cran-bitops. 113s Preparing to unpack .../107-r-cran-bitops_1.0-9-1_amd64.deb ... 113s Unpacking r-cran-bitops (1.0-9-1) ... 113s Selecting previously unselected package r-cran-rcurl. 113s Preparing to unpack .../108-r-cran-rcurl_1.98-1.16+dfsg-1_amd64.deb ... 113s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 113s Selecting previously unselected package r-cran-runit. 113s Preparing to unpack .../109-r-cran-runit_0.4.33-1_all.deb ... 113s Unpacking r-cran-runit (0.4.33-1) ... 113s Selecting previously unselected package r-cran-biocmanager. 113s Preparing to unpack .../110-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 113s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 113s Selecting previously unselected package r-bioc-biocviews. 113s Preparing to unpack .../111-r-bioc-biocviews_1.74.0-2_all.deb ... 113s Unpacking r-bioc-biocviews (1.74.0-2) ... 113s Selecting previously unselected package r-bioc-iranges. 113s Preparing to unpack .../112-r-bioc-iranges_2.40.1-2_amd64.deb ... 113s Unpacking r-bioc-iranges (2.40.1-2) ... 113s Selecting previously unselected package zlib1g-dev:amd64. 113s Preparing to unpack .../113-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ... 113s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 113s Selecting previously unselected package r-bioc-zlibbioc. 113s Preparing to unpack .../114-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 113s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 113s Selecting previously unselected package r-bioc-xvector. 113s Preparing to unpack .../115-r-bioc-xvector_0.46.0-2_amd64.deb ... 113s Unpacking r-bioc-xvector (0.46.0-2) ... 113s Selecting previously unselected package r-cran-curl. 113s Preparing to unpack .../116-r-cran-curl_6.1.0+dfsg-1_amd64.deb ... 113s Unpacking r-cran-curl (6.1.0+dfsg-1) ... 113s Selecting previously unselected package r-cran-jsonlite. 113s Preparing to unpack .../117-r-cran-jsonlite_1.8.9+dfsg-1_amd64.deb ... 113s Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ... 113s Selecting previously unselected package r-cran-mime. 113s Preparing to unpack .../118-r-cran-mime_0.12-2_amd64.deb ... 113s Unpacking r-cran-mime (0.12-2) ... 113s Selecting previously unselected package r-cran-sys. 113s Preparing to unpack .../119-r-cran-sys_3.4.3-1_amd64.deb ... 113s Unpacking r-cran-sys (3.4.3-1) ... 113s Selecting previously unselected package r-cran-askpass. 113s Preparing to unpack .../120-r-cran-askpass_1.2.1-1_amd64.deb ... 113s Unpacking r-cran-askpass (1.2.1-1) ... 113s Selecting previously unselected package r-cran-openssl. 114s Preparing to unpack .../121-r-cran-openssl_2.2.0+dfsg-1_amd64.deb ... 114s Unpacking r-cran-openssl (2.2.0+dfsg-1) ... 114s Selecting previously unselected package r-cran-r6. 114s Preparing to unpack .../122-r-cran-r6_2.5.1-1_all.deb ... 114s Unpacking r-cran-r6 (2.5.1-1) ... 114s Selecting previously unselected package r-cran-httr. 114s Preparing to unpack .../123-r-cran-httr_1.4.7+dfsg-1_all.deb ... 114s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 114s Selecting previously unselected package r-bioc-ucsc.utils. 114s Preparing to unpack .../124-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 114s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 114s Selecting previously unselected package r-bioc-genomeinfodbdata. 114s Preparing to unpack .../125-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 114s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 114s Selecting previously unselected package r-bioc-genomeinfodb. 114s Preparing to unpack .../126-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 114s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 114s Selecting previously unselected package r-cran-crayon. 114s Preparing to unpack .../127-r-cran-crayon_1.5.3-1_all.deb ... 114s Unpacking r-cran-crayon (1.5.3-1) ... 114s Selecting previously unselected package r-bioc-biostrings. 114s Preparing to unpack .../128-r-bioc-biostrings_2.74.1+dfsg-2_amd64.deb ... 114s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 114s Selecting previously unselected package r-cran-lattice. 114s Preparing to unpack .../129-r-cran-lattice_0.22-6-1_amd64.deb ... 114s Unpacking r-cran-lattice (0.22-6-1) ... 114s Selecting previously unselected package r-cran-matrix. 114s Preparing to unpack .../130-r-cran-matrix_1.7-2-1_amd64.deb ... 114s Unpacking r-cran-matrix (1.7-2-1) ... 114s Selecting previously unselected package r-cran-matrixstats. 114s Preparing to unpack .../131-r-cran-matrixstats_1.5.0-1_amd64.deb ... 114s Unpacking r-cran-matrixstats (1.5.0-1) ... 114s Selecting previously unselected package r-bioc-matrixgenerics. 114s Preparing to unpack .../132-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 114s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 114s Selecting previously unselected package r-cran-abind. 114s Preparing to unpack .../133-r-cran-abind_1.4-8-1_all.deb ... 114s Unpacking r-cran-abind (1.4-8-1) ... 114s Selecting previously unselected package r-bioc-s4arrays. 114s Preparing to unpack .../134-r-bioc-s4arrays_1.6.0+dfsg-2_amd64.deb ... 114s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 114s Selecting previously unselected package r-bioc-sparsearray. 114s Preparing to unpack .../135-r-bioc-sparsearray_1.6.1+dfsg-1_amd64.deb ... 114s Unpacking r-bioc-sparsearray (1.6.1+dfsg-1) ... 114s Selecting previously unselected package r-bioc-delayedarray. 114s Preparing to unpack .../136-r-bioc-delayedarray_0.32.0+dfsg-2_amd64.deb ... 114s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 114s Selecting previously unselected package r-bioc-genomicranges. 114s Preparing to unpack .../137-r-bioc-genomicranges_1.58.0+dfsg-2_amd64.deb ... 114s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 114s Selecting previously unselected package r-bioc-summarizedexperiment. 114s Preparing to unpack .../138-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 114s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 114s Selecting previously unselected package r-cran-locfit. 114s Preparing to unpack .../139-r-cran-locfit_1.5-9.11-1_amd64.deb ... 114s Unpacking r-cran-locfit (1.5-9.11-1) ... 114s Selecting previously unselected package r-cran-cli. 114s Preparing to unpack .../140-r-cran-cli_3.6.3-1_amd64.deb ... 114s Unpacking r-cran-cli (3.6.3-1) ... 115s Selecting previously unselected package r-cran-glue. 115s Preparing to unpack .../141-r-cran-glue_1.8.0-1_amd64.deb ... 115s Unpacking r-cran-glue (1.8.0-1) ... 115s Selecting previously unselected package r-cran-rlang. 115s Preparing to unpack .../142-r-cran-rlang_1.1.5-1_amd64.deb ... 115s Unpacking r-cran-rlang (1.1.5-1) ... 115s Selecting previously unselected package r-cran-lifecycle. 115s Preparing to unpack .../143-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 115s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 115s Selecting previously unselected package r-cran-gtable. 115s Preparing to unpack .../144-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 115s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 115s Selecting previously unselected package r-cran-isoband. 115s Preparing to unpack .../145-r-cran-isoband_0.2.7-1_amd64.deb ... 115s Unpacking r-cran-isoband (0.2.7-1) ... 115s Selecting previously unselected package r-cran-mass. 115s Preparing to unpack .../146-r-cran-mass_7.3-64-1_amd64.deb ... 115s Unpacking r-cran-mass (7.3-64-1) ... 115s Selecting previously unselected package r-cran-nlme. 115s Preparing to unpack .../147-r-cran-nlme_3.1.167-1_amd64.deb ... 115s Unpacking r-cran-nlme (3.1.167-1) ... 115s Selecting previously unselected package r-cran-mgcv. 115s Preparing to unpack .../148-r-cran-mgcv_1.9-1-1_amd64.deb ... 115s Unpacking r-cran-mgcv (1.9-1-1) ... 115s Selecting previously unselected package r-cran-farver. 115s Preparing to unpack .../149-r-cran-farver_2.1.2-1_amd64.deb ... 115s Unpacking r-cran-farver (2.1.2-1) ... 115s Selecting previously unselected package r-cran-labeling. 115s Preparing to unpack .../150-r-cran-labeling_0.4.3-1_all.deb ... 115s Unpacking r-cran-labeling (0.4.3-1) ... 115s Selecting previously unselected package r-cran-colorspace. 115s Preparing to unpack .../151-r-cran-colorspace_2.1-1+dfsg-1_amd64.deb ... 115s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 115s Selecting previously unselected package r-cran-munsell. 115s Preparing to unpack .../152-r-cran-munsell_0.5.1-1_all.deb ... 115s Unpacking r-cran-munsell (0.5.1-1) ... 115s Selecting previously unselected package r-cran-rcolorbrewer. 115s Preparing to unpack .../153-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 115s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 115s Selecting previously unselected package r-cran-viridislite. 115s Preparing to unpack .../154-r-cran-viridislite_0.4.2-2_all.deb ... 115s Unpacking r-cran-viridislite (0.4.2-2) ... 115s Selecting previously unselected package r-cran-scales. 115s Preparing to unpack .../155-r-cran-scales_1.3.0-1_all.deb ... 115s Unpacking r-cran-scales (1.3.0-1) ... 115s Selecting previously unselected package r-cran-fansi. 115s Preparing to unpack .../156-r-cran-fansi_1.0.5-1_amd64.deb ... 115s Unpacking r-cran-fansi (1.0.5-1) ... 115s Selecting previously unselected package r-cran-magrittr. 115s Preparing to unpack .../157-r-cran-magrittr_2.0.3-1_amd64.deb ... 115s Unpacking r-cran-magrittr (2.0.3-1) ... 115s Selecting previously unselected package r-cran-utf8. 115s Preparing to unpack .../158-r-cran-utf8_1.2.4-1_amd64.deb ... 115s Unpacking r-cran-utf8 (1.2.4-1) ... 115s Selecting previously unselected package r-cran-vctrs. 115s Preparing to unpack .../159-r-cran-vctrs_0.6.5-1_amd64.deb ... 115s Unpacking r-cran-vctrs (0.6.5-1) ... 115s Selecting previously unselected package r-cran-pillar. 115s Preparing to unpack .../160-r-cran-pillar_1.10.1+dfsg-1_all.deb ... 115s Unpacking r-cran-pillar (1.10.1+dfsg-1) ... 115s Selecting previously unselected package r-cran-pkgconfig. 115s Preparing to unpack .../161-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 115s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 115s Selecting previously unselected package r-cran-tibble. 115s Preparing to unpack .../162-r-cran-tibble_3.2.1+dfsg-3_amd64.deb ... 115s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 115s Selecting previously unselected package r-cran-withr. 115s Preparing to unpack .../163-r-cran-withr_3.0.2+dfsg-1_all.deb ... 115s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 115s Selecting previously unselected package r-cran-ggplot2. 115s Preparing to unpack .../164-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 115s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 116s Selecting previously unselected package r-cran-pkgkitten. 116s Preparing to unpack .../165-r-cran-pkgkitten_0.2.4-1_all.deb ... 116s Unpacking r-cran-pkgkitten (0.2.4-1) ... 116s Selecting previously unselected package r-cran-rcpp. 116s Preparing to unpack .../166-r-cran-rcpp_1.0.14-1_amd64.deb ... 116s Unpacking r-cran-rcpp (1.0.14-1) ... 116s Selecting previously unselected package r-cran-rcpparmadillo. 116s Preparing to unpack .../167-r-cran-rcpparmadillo_14.2.3-1-1_amd64.deb ... 116s Unpacking r-cran-rcpparmadillo (14.2.3-1-1) ... 116s Selecting previously unselected package r-bioc-deseq2. 116s Preparing to unpack .../168-r-bioc-deseq2_1.46.0+dfsg-2_amd64.deb ... 116s Unpacking r-bioc-deseq2 (1.46.0+dfsg-2) ... 116s Selecting previously unselected package r-bioc-rhtslib. 116s Preparing to unpack .../169-r-bioc-rhtslib_3.2.0+dfsg-2_amd64.deb ... 116s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 116s Selecting previously unselected package r-bioc-rsamtools. 116s Preparing to unpack .../170-r-bioc-rsamtools_2.22.0+dfsg-2_amd64.deb ... 116s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 116s Selecting previously unselected package r-bioc-genomicalignments. 116s Preparing to unpack .../171-r-bioc-genomicalignments_1.42.0-2_amd64.deb ... 116s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 116s Selecting previously unselected package r-bioc-hsmmsinglecell. 116s Preparing to unpack .../172-r-bioc-hsmmsinglecell_1.26.0-2_all.deb ... 116s Unpacking r-bioc-hsmmsinglecell (1.26.0-2) ... 116s Selecting previously unselected package r-cran-statmod. 116s Preparing to unpack .../173-r-cran-statmod_1.5.0-1_amd64.deb ... 116s Unpacking r-cran-statmod (1.5.0-1) ... 116s Selecting previously unselected package r-bioc-limma. 116s Preparing to unpack .../174-r-bioc-limma_3.62.2+dfsg-1_amd64.deb ... 116s Unpacking r-bioc-limma (3.62.2+dfsg-1) ... 116s Selecting previously unselected package r-cran-vgam. 116s Preparing to unpack .../175-r-cran-vgam_1.1-12-1_amd64.deb ... 116s Unpacking r-cran-vgam (1.1-12-1) ... 116s Selecting previously unselected package r-cran-irlba. 116s Preparing to unpack .../176-r-cran-irlba_2.3.5.1-4_amd64.deb ... 116s Unpacking r-cran-irlba (2.3.5.1-4) ... 116s Selecting previously unselected package r-cran-rcppeigen. 116s Preparing to unpack .../177-r-cran-rcppeigen_0.3.4.0.2-1_amd64.deb ... 116s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 116s Selecting previously unselected package r-cran-ddrtree. 117s Preparing to unpack .../178-r-cran-ddrtree_0.1.5-2_amd64.deb ... 117s Unpacking r-cran-ddrtree (0.1.5-2) ... 117s Selecting previously unselected package r-cran-igraph. 117s Preparing to unpack .../179-r-cran-igraph_2.1.4-1_amd64.deb ... 117s Unpacking r-cran-igraph (2.1.4-1) ... 117s Selecting previously unselected package r-cran-plyr. 117s Preparing to unpack .../180-r-cran-plyr_1.8.9-1_amd64.deb ... 117s Unpacking r-cran-plyr (1.8.9-1) ... 117s Selecting previously unselected package r-cran-cluster. 117s Preparing to unpack .../181-r-cran-cluster_2.1.8-1_amd64.deb ... 117s Unpacking r-cran-cluster (2.1.8-1) ... 117s Selecting previously unselected package r-cran-combinat. 117s Preparing to unpack .../182-r-cran-combinat_0.0-8-7build1_all.deb ... 117s Unpacking r-cran-combinat (0.0-8-7build1) ... 117s Selecting previously unselected package r-cran-fastica. 117s Preparing to unpack .../183-r-cran-fastica_1.2-7-1_amd64.deb ... 117s Unpacking r-cran-fastica (1.2-7-1) ... 117s Selecting previously unselected package r-cran-rtsne. 117s Preparing to unpack .../184-r-cran-rtsne_0.17-1_amd64.deb ... 117s Unpacking r-cran-rtsne (0.17-1) ... 117s Selecting previously unselected package r-cran-stringi. 117s Preparing to unpack .../185-r-cran-stringi_1.8.4-1build1_amd64.deb ... 117s Unpacking r-cran-stringi (1.8.4-1build1) ... 117s Selecting previously unselected package r-cran-stringr. 117s Preparing to unpack .../186-r-cran-stringr_1.5.1-1_all.deb ... 117s Unpacking r-cran-stringr (1.5.1-1) ... 117s Selecting previously unselected package r-cran-reshape2. 117s Preparing to unpack .../187-r-cran-reshape2_1.4.4-2build1_amd64.deb ... 117s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 117s Selecting previously unselected package r-cran-leidenbase. 117s Preparing to unpack .../188-r-cran-leidenbase_0.1.31-1_amd64.deb ... 117s Unpacking r-cran-leidenbase (0.1.31-1) ... 117s Selecting previously unselected package r-cran-generics. 117s Preparing to unpack .../189-r-cran-generics_0.1.3-1_all.deb ... 117s Unpacking r-cran-generics (0.1.3-1) ... 117s Selecting previously unselected package r-cran-tidyselect. 117s Preparing to unpack .../190-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ... 117s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 117s Selecting previously unselected package r-cran-dplyr. 117s Preparing to unpack .../191-r-cran-dplyr_1.1.4-4_amd64.deb ... 117s Unpacking r-cran-dplyr (1.1.4-4) ... 117s Selecting previously unselected package r-cran-pheatmap. 117s Preparing to unpack .../192-r-cran-pheatmap_1.0.12-2build1_all.deb ... 117s Unpacking r-cran-pheatmap (1.0.12-2build1) ... 117s Selecting previously unselected package r-cran-proxy. 117s Preparing to unpack .../193-r-cran-proxy_0.4-27-1_amd64.deb ... 117s Unpacking r-cran-proxy (0.4-27-1) ... 117s Selecting previously unselected package r-cran-slam. 117s Preparing to unpack .../194-r-cran-slam_0.1-55-1_amd64.deb ... 117s Unpacking r-cran-slam (0.1-55-1) ... 117s Selecting previously unselected package r-cran-gridextra. 117s Preparing to unpack .../195-r-cran-gridextra_2.3-3build1_all.deb ... 117s Unpacking r-cran-gridextra (2.3-3build1) ... 117s Selecting previously unselected package r-cran-viridis. 117s Preparing to unpack .../196-r-cran-viridis_0.6.5-1_all.deb ... 117s Unpacking r-cran-viridis (0.6.5-1) ... 117s Selecting previously unselected package r-cran-rann. 117s Preparing to unpack .../197-r-cran-rann_2.6.2-1_amd64.deb ... 117s Unpacking r-cran-rann (2.6.2-1) ... 117s Selecting previously unselected package r-bioc-monocle. 117s Preparing to unpack .../198-r-bioc-monocle_2.34.0-2_amd64.deb ... 117s Unpacking r-bioc-monocle (2.34.0-2) ... 117s Selecting previously unselected package r-cran-survival. 117s Preparing to unpack .../199-r-cran-survival_3.8-3-1_amd64.deb ... 117s Unpacking r-cran-survival (3.8-3-1) ... 117s Selecting previously unselected package r-bioc-multtest. 118s Preparing to unpack .../200-r-bioc-multtest_2.62.0-2_amd64.deb ... 118s Unpacking r-bioc-multtest (2.62.0-2) ... 118s Selecting previously unselected package r-cran-rjson. 118s Preparing to unpack .../201-r-cran-rjson_0.2.23-1_amd64.deb ... 118s Unpacking r-cran-rjson (0.2.23-1) ... 118s Selecting previously unselected package r-cran-yaml. 118s Preparing to unpack .../202-r-cran-yaml_2.3.10-1_amd64.deb ... 118s Unpacking r-cran-yaml (2.3.10-1) ... 118s Selecting previously unselected package r-cran-restfulr. 118s Preparing to unpack .../203-r-cran-restfulr_0.0.15-1_amd64.deb ... 118s Unpacking r-cran-restfulr (0.0.15-1) ... 118s Selecting previously unselected package r-bioc-rtracklayer. 118s Preparing to unpack .../204-r-bioc-rtracklayer_1.66.0-2_amd64.deb ... 118s Unpacking r-bioc-rtracklayer (1.66.0-2) ... 118s Selecting previously unselected package r-bioc-singlecellexperiment. 118s Preparing to unpack .../205-r-bioc-singlecellexperiment_1.28.1+ds-2_all.deb ... 118s Unpacking r-bioc-singlecellexperiment (1.28.1+ds-2) ... 118s Selecting previously unselected package r-cran-digest. 118s Preparing to unpack .../206-r-cran-digest_0.6.37-1_amd64.deb ... 118s Unpacking r-cran-digest (0.6.37-1) ... 118s Selecting previously unselected package r-cran-ape. 118s Preparing to unpack .../207-r-cran-ape_5.8-1-1_amd64.deb ... 118s Unpacking r-cran-ape (5.8-1-1) ... 118s Selecting previously unselected package r-cran-base64enc. 118s Preparing to unpack .../208-r-cran-base64enc_0.1-3-3_amd64.deb ... 118s Unpacking r-cran-base64enc (0.1-3-3) ... 118s Selecting previously unselected package r-cran-beeswarm. 118s Preparing to unpack .../209-r-cran-beeswarm_0.4.0-1_amd64.deb ... 118s Unpacking r-cran-beeswarm (0.4.0-1) ... 118s Selecting previously unselected package r-cran-bit. 118s Preparing to unpack .../210-r-cran-bit_4.5.0.1-1_amd64.deb ... 118s Unpacking r-cran-bit (4.5.0.1-1) ... 118s Selecting previously unselected package r-cran-bit64. 118s Preparing to unpack .../211-r-cran-bit64_4.0.5-1_amd64.deb ... 118s Unpacking r-cran-bit64 (4.0.5-1) ... 118s Selecting previously unselected package r-cran-brio. 118s Preparing to unpack .../212-r-cran-brio_1.1.5-1_amd64.deb ... 118s Unpacking r-cran-brio (1.1.5-1) ... 118s Selecting previously unselected package r-cran-fastmap. 118s Preparing to unpack .../213-r-cran-fastmap_1.2.0-1_amd64.deb ... 118s Unpacking r-cran-fastmap (1.2.0-1) ... 118s Selecting previously unselected package r-cran-cachem. 118s Preparing to unpack .../214-r-cran-cachem_1.1.0-1_amd64.deb ... 118s Unpacking r-cran-cachem (1.1.0-1) ... 118s Selecting previously unselected package r-cran-htmltools. 118s Preparing to unpack .../215-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 118s Unpacking r-cran-htmltools (0.5.8.1-1) ... 118s Selecting previously unselected package r-cran-jquerylib. 118s Preparing to unpack .../216-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 118s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 118s Selecting previously unselected package r-cran-memoise. 118s Preparing to unpack .../217-r-cran-memoise_2.0.1-1_all.deb ... 118s Unpacking r-cran-memoise (2.0.1-1) ... 118s Selecting previously unselected package r-cran-fs. 118s Preparing to unpack .../218-r-cran-fs_1.6.5+dfsg-1_amd64.deb ... 118s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 118s Selecting previously unselected package r-cran-rappdirs. 118s Preparing to unpack .../219-r-cran-rappdirs_0.3.3-1_amd64.deb ... 118s Unpacking r-cran-rappdirs (0.3.3-1) ... 118s Selecting previously unselected package r-cran-sass. 118s Preparing to unpack .../220-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 118s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 118s Selecting previously unselected package r-cran-bslib. 118s Preparing to unpack .../221-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 118s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 119s Selecting previously unselected package r-cran-cairo. 119s Preparing to unpack .../222-r-cran-cairo_1.6-2-1_amd64.deb ... 119s Unpacking r-cran-cairo (1.6-2-1) ... 119s Selecting previously unselected package r-cran-ps. 119s Preparing to unpack .../223-r-cran-ps_1.8.1-1_amd64.deb ... 119s Unpacking r-cran-ps (1.8.1-1) ... 119s Selecting previously unselected package r-cran-processx. 119s Preparing to unpack .../224-r-cran-processx_3.8.5-1_amd64.deb ... 119s Unpacking r-cran-processx (3.8.5-1) ... 119s Selecting previously unselected package r-cran-callr. 119s Preparing to unpack .../225-r-cran-callr_3.7.6-1_all.deb ... 119s Unpacking r-cran-callr (3.7.6-1) ... 119s Selecting previously unselected package r-cran-class. 119s Preparing to unpack .../226-r-cran-class_7.3-23-1_amd64.deb ... 119s Unpacking r-cran-class (7.3-23-1) ... 119s Selecting previously unselected package r-cran-e1071. 119s Preparing to unpack .../227-r-cran-e1071_1.7-16-1_amd64.deb ... 119s Unpacking r-cran-e1071 (1.7-16-1) ... 119s Selecting previously unselected package r-cran-iterators. 119s Preparing to unpack .../228-r-cran-iterators_1.0.14-1_all.deb ... 119s Unpacking r-cran-iterators (1.0.14-1) ... 119s Selecting previously unselected package r-cran-foreach. 119s Preparing to unpack .../229-r-cran-foreach_1.5.2-1_all.deb ... 119s Unpacking r-cran-foreach (1.5.2-1) ... 119s Selecting previously unselected package r-cran-data.table. 119s Preparing to unpack .../230-r-cran-data.table_1.16.4+dfsg-1_amd64.deb ... 119s Unpacking r-cran-data.table (1.16.4+dfsg-1) ... 119s Selecting previously unselected package r-cran-modelmetrics. 119s Preparing to unpack .../231-r-cran-modelmetrics_1.2.2.2-1build1_amd64.deb ... 119s Unpacking r-cran-modelmetrics (1.2.2.2-1build1) ... 119s Selecting previously unselected package r-cran-proc. 119s Preparing to unpack .../232-r-cran-proc_1.18.5-1_amd64.deb ... 119s Unpacking r-cran-proc (1.18.5-1) ... 119s Selecting previously unselected package r-cran-tzdb. 119s Preparing to unpack .../233-r-cran-tzdb_0.4.0-2_amd64.deb ... 119s Unpacking r-cran-tzdb (0.4.0-2) ... 119s Selecting previously unselected package r-cran-clock. 119s Preparing to unpack .../234-r-cran-clock_0.7.1-1_amd64.deb ... 119s Unpacking r-cran-clock (0.7.1-1) ... 119s Selecting previously unselected package r-cran-gower. 119s Preparing to unpack .../235-r-cran-gower_1.0.2-1_amd64.deb ... 119s Unpacking r-cran-gower (1.0.2-1) ... 119s Selecting previously unselected package r-cran-hardhat. 119s Preparing to unpack .../236-r-cran-hardhat_1.4.0+dfsg-1_all.deb ... 119s Unpacking r-cran-hardhat (1.4.0+dfsg-1) ... 119s Selecting previously unselected package r-cran-rpart. 119s Preparing to unpack .../237-r-cran-rpart_4.1.24-1_amd64.deb ... 119s Unpacking r-cran-rpart (4.1.24-1) ... 119s Selecting previously unselected package r-cran-nnet. 119s Preparing to unpack .../238-r-cran-nnet_7.3-20-1_amd64.deb ... 119s Unpacking r-cran-nnet (7.3-20-1) ... 119s Selecting previously unselected package r-cran-shape. 119s Preparing to unpack .../239-r-cran-shape_1.4.6.1-1_all.deb ... 119s Unpacking r-cran-shape (1.4.6.1-1) ... 119s Selecting previously unselected package r-cran-diagram. 119s Preparing to unpack .../240-r-cran-diagram_1.6.5-2_all.deb ... 119s Unpacking r-cran-diagram (1.6.5-2) ... 119s Selecting previously unselected package r-cran-kernsmooth. 119s Preparing to unpack .../241-r-cran-kernsmooth_2.23-26-1_amd64.deb ... 119s Unpacking r-cran-kernsmooth (2.23-26-1) ... 119s Selecting previously unselected package r-cran-globals. 119s Preparing to unpack .../242-r-cran-globals_0.16.3-1_all.deb ... 119s Unpacking r-cran-globals (0.16.3-1) ... 119s Selecting previously unselected package r-cran-listenv. 119s Preparing to unpack .../243-r-cran-listenv_0.9.1+dfsg-1_all.deb ... 119s Unpacking r-cran-listenv (0.9.1+dfsg-1) ... 119s Selecting previously unselected package r-cran-parallelly. 119s Preparing to unpack .../244-r-cran-parallelly_1.42.0-1_amd64.deb ... 119s Unpacking r-cran-parallelly (1.42.0-1) ... 119s Selecting previously unselected package r-cran-future. 119s Preparing to unpack .../245-r-cran-future_1.34.0+dfsg-1_all.deb ... 119s Unpacking r-cran-future (1.34.0+dfsg-1) ... 120s Selecting previously unselected package r-cran-future.apply. 120s Preparing to unpack .../246-r-cran-future.apply_1.11.3+dfsg-1_all.deb ... 120s Unpacking r-cran-future.apply (1.11.3+dfsg-1) ... 120s Selecting previously unselected package r-cran-numderiv. 120s Preparing to unpack .../247-r-cran-numderiv_2016.8-1.1-3_all.deb ... 120s Unpacking r-cran-numderiv (2016.8-1.1-3) ... 120s Selecting previously unselected package r-cran-progressr. 120s Preparing to unpack .../248-r-cran-progressr_0.15.1-1_all.deb ... 120s Unpacking r-cran-progressr (0.15.1-1) ... 120s Selecting previously unselected package r-cran-squarem. 120s Preparing to unpack .../249-r-cran-squarem_2021.1-1_all.deb ... 120s Unpacking r-cran-squarem (2021.1-1) ... 120s Selecting previously unselected package r-cran-lava. 120s Preparing to unpack .../250-r-cran-lava_1.8.1+dfsg-1_all.deb ... 120s Unpacking r-cran-lava (1.8.1+dfsg-1) ... 120s Selecting previously unselected package r-cran-prodlim. 120s Preparing to unpack .../251-r-cran-prodlim_2024.06.25-1_amd64.deb ... 120s Unpacking r-cran-prodlim (2024.06.25-1) ... 120s Selecting previously unselected package r-cran-ipred. 120s Preparing to unpack .../252-r-cran-ipred_0.9-15-1_amd64.deb ... 120s Unpacking r-cran-ipred (0.9-15-1) ... 120s Selecting previously unselected package r-cran-timechange. 120s Preparing to unpack .../253-r-cran-timechange_0.3.0-1_amd64.deb ... 120s Unpacking r-cran-timechange (0.3.0-1) ... 120s Selecting previously unselected package r-cran-lubridate. 120s Preparing to unpack .../254-r-cran-lubridate_1.9.4+dfsg-1_amd64.deb ... 120s Unpacking r-cran-lubridate (1.9.4+dfsg-1) ... 120s Selecting previously unselected package r-cran-purrr. 120s Preparing to unpack .../255-r-cran-purrr_1.0.2-1_amd64.deb ... 120s Unpacking r-cran-purrr (1.0.2-1) ... 120s Selecting previously unselected package r-cran-tidyr. 120s Preparing to unpack .../256-r-cran-tidyr_1.3.1-1_amd64.deb ... 120s Unpacking r-cran-tidyr (1.3.1-1) ... 120s Selecting previously unselected package r-cran-timedate. 120s Preparing to unpack .../257-r-cran-timedate_4041.110-1_amd64.deb ... 120s Unpacking r-cran-timedate (4041.110-1) ... 120s Selecting previously unselected package r-cran-recipes. 120s Preparing to unpack .../258-r-cran-recipes_1.1.0+dfsg-1_all.deb ... 120s Unpacking r-cran-recipes (1.1.0+dfsg-1) ... 120s Selecting previously unselected package r-cran-caret. 120s Preparing to unpack .../259-r-cran-caret_7.0-1+dfsg-1_amd64.deb ... 120s Unpacking r-cran-caret (7.0-1+dfsg-1) ... 120s Selecting previously unselected package r-cran-catools. 120s Preparing to unpack .../260-r-cran-catools_1.18.2-1_amd64.deb ... 120s Unpacking r-cran-catools (1.18.2-1) ... 120s Selecting previously unselected package r-cran-evaluate. 120s Preparing to unpack .../261-r-cran-evaluate_1.0.3-1_all.deb ... 120s Unpacking r-cran-evaluate (1.0.3-1) ... 120s Selecting previously unselected package r-cran-xfun. 120s Preparing to unpack .../262-r-cran-xfun_0.50+dfsg-1_amd64.deb ... 120s Unpacking r-cran-xfun (0.50+dfsg-1) ... 120s Selecting previously unselected package r-cran-highr. 120s Preparing to unpack .../263-r-cran-highr_0.11+dfsg-1_all.deb ... 120s Unpacking r-cran-highr (0.11+dfsg-1) ... 120s Selecting previously unselected package libjs-mathjax. 120s Preparing to unpack .../264-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 120s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 121s Selecting previously unselected package r-cran-knitr. 121s Preparing to unpack .../265-r-cran-knitr_1.49+dfsg-1_all.deb ... 121s Unpacking r-cran-knitr (1.49+dfsg-1) ... 121s Selecting previously unselected package r-cran-fontawesome. 121s Preparing to unpack .../266-r-cran-fontawesome_0.5.3-1_all.deb ... 121s Unpacking r-cran-fontawesome (0.5.3-1) ... 121s Selecting previously unselected package r-cran-tinytex. 121s Preparing to unpack .../267-r-cran-tinytex_0.54-1_all.deb ... 121s Unpacking r-cran-tinytex (0.54-1) ... 121s Selecting previously unselected package libjs-modernizr. 121s Preparing to unpack .../268-libjs-modernizr_3.13.0-0.1_all.deb ... 121s Unpacking libjs-modernizr (3.13.0-0.1) ... 121s Selecting previously unselected package r-cran-later. 121s Preparing to unpack .../269-r-cran-later_1.4.1+dfsg-1_amd64.deb ... 121s Unpacking r-cran-later (1.4.1+dfsg-1) ... 121s Selecting previously unselected package r-cran-promises. 121s Preparing to unpack .../270-r-cran-promises_1.3.2+dfsg-1_amd64.deb ... 121s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 121s Selecting previously unselected package r-cran-httpuv. 121s Preparing to unpack .../271-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 121s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 121s Selecting previously unselected package r-cran-xtable. 121s Preparing to unpack .../272-r-cran-xtable_1%3a1.8-4-2_all.deb ... 121s Unpacking r-cran-xtable (1:1.8-4-2) ... 121s Selecting previously unselected package r-cran-sourcetools. 121s Preparing to unpack .../273-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 121s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 121s Selecting previously unselected package r-cran-commonmark. 121s Preparing to unpack .../274-r-cran-commonmark_1.9.2-2_amd64.deb ... 121s Unpacking r-cran-commonmark (1.9.2-2) ... 121s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 121s Preparing to unpack .../275-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 121s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 121s Selecting previously unselected package r-cran-shiny. 121s Preparing to unpack .../276-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 121s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 122s Selecting previously unselected package r-cran-rmarkdown. 122s Preparing to unpack .../277-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 122s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 122s Selecting previously unselected package r-cran-htmlwidgets. 122s Preparing to unpack .../278-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 122s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 122s Selecting previously unselected package r-cran-miniui. 122s Preparing to unpack .../279-r-cran-miniui_0.1.1.1-3build1_all.deb ... 122s Unpacking r-cran-miniui (0.1.1.1-3build1) ... 122s Selecting previously unselected package r-cran-shinyjs. 122s Preparing to unpack .../280-r-cran-shinyjs_2.1.0-1_all.deb ... 122s Unpacking r-cran-shinyjs (2.1.0-1) ... 122s Selecting previously unselected package r-cran-colourpicker. 122s Preparing to unpack .../281-r-cran-colourpicker_1.3.0+dfsg-1_all.deb ... 122s Unpacking r-cran-colourpicker (1.3.0+dfsg-1) ... 122s Selecting previously unselected package r-cran-conquer. 122s Preparing to unpack .../282-r-cran-conquer_1.3.3-1_amd64.deb ... 122s Unpacking r-cran-conquer (1.3.3-1) ... 122s Selecting previously unselected package r-cran-cowplot. 122s Preparing to unpack .../283-r-cran-cowplot_1.1.3+dfsg-1_all.deb ... 122s Unpacking r-cran-cowplot (1.1.3+dfsg-1) ... 122s Selecting previously unselected package r-cran-lazyeval. 122s Preparing to unpack .../284-r-cran-lazyeval_0.2.2-1build1_amd64.deb ... 122s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 122s Selecting previously unselected package r-cran-crosstalk. 122s Preparing to unpack .../285-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 122s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 122s Selecting previously unselected package r-cran-deldir. 122s Preparing to unpack .../286-r-cran-deldir_2.0-4-1build1_amd64.deb ... 122s Unpacking r-cran-deldir (2.0-4-1build1) ... 122s Selecting previously unselected package r-cran-deoptimr. 122s Preparing to unpack .../287-r-cran-deoptimr_1.1-3-1-1_all.deb ... 122s Unpacking r-cran-deoptimr (1.1-3-1-1) ... 122s Selecting previously unselected package r-cran-desc. 122s Preparing to unpack .../288-r-cran-desc_1.4.3-1_all.deb ... 122s Unpacking r-cran-desc (1.4.3-1) ... 122s Selecting previously unselected package r-cran-diffobj. 122s Preparing to unpack .../289-r-cran-diffobj_0.3.5-1_amd64.deb ... 122s Unpacking r-cran-diffobj (0.3.5-1) ... 122s Selecting previously unselected package r-cran-dotcall64. 122s Preparing to unpack .../290-r-cran-dotcall64_1.2-1_amd64.deb ... 122s Unpacking r-cran-dotcall64 (1.2-1) ... 122s Selecting previously unselected package r-cran-sitmo. 122s Preparing to unpack .../291-r-cran-sitmo_2.0.2-1_amd64.deb ... 122s Unpacking r-cran-sitmo (2.0.2-1) ... 122s Selecting previously unselected package r-cran-dqrng. 122s Preparing to unpack .../292-r-cran-dqrng_0.3.2+dfsg-1_amd64.deb ... 122s Unpacking r-cran-dqrng (0.3.2+dfsg-1) ... 122s Selecting previously unselected package r-cran-fastdummies. 122s Preparing to unpack .../293-r-cran-fastdummies_1.7.5-1_all.deb ... 122s Unpacking r-cran-fastdummies (1.7.5-1) ... 122s Selecting previously unselected package r-cran-fitdistrplus. 122s Preparing to unpack .../294-r-cran-fitdistrplus_1.2-2-1_all.deb ... 122s Unpacking r-cran-fitdistrplus (1.2-2-1) ... 122s Selecting previously unselected package r-cran-fnn. 122s Preparing to unpack .../295-r-cran-fnn_1.1.4.1-1_amd64.deb ... 122s Unpacking r-cran-fnn (1.1.4.1-1) ... 122s Selecting previously unselected package r-cran-gtools. 122s Preparing to unpack .../296-r-cran-gtools_3.9.5-1_amd64.deb ... 122s Unpacking r-cran-gtools (3.9.5-1) ... 122s Selecting previously unselected package r-cran-gdata. 122s Preparing to unpack .../297-r-cran-gdata_3.0.1-1_all.deb ... 122s Unpacking r-cran-gdata (3.0.1-1) ... 123s Selecting previously unselected package r-cran-vipor. 123s Preparing to unpack .../298-r-cran-vipor_0.4.7-1_all.deb ... 123s Unpacking r-cran-vipor (0.4.7-1) ... 123s Selecting previously unselected package r-cran-ggbeeswarm. 123s Preparing to unpack .../299-r-cran-ggbeeswarm_0.7.2-1_all.deb ... 123s Unpacking r-cran-ggbeeswarm (0.7.2-1) ... 123s Selecting previously unselected package r-cran-png. 123s Preparing to unpack .../300-r-cran-png_0.1-8-1build2_amd64.deb ... 123s Unpacking r-cran-png (0.1-8-1build2) ... 123s Selecting previously unselected package r-cran-systemfonts. 123s Preparing to unpack .../301-r-cran-systemfonts_1.2.1-1_amd64.deb ... 123s Unpacking r-cran-systemfonts (1.2.1-1) ... 123s Selecting previously unselected package r-cran-textshaping. 123s Preparing to unpack .../302-r-cran-textshaping_0.3.7-2_amd64.deb ... 123s Unpacking r-cran-textshaping (0.3.7-2) ... 123s Selecting previously unselected package r-cran-ragg. 123s Preparing to unpack .../303-r-cran-ragg_1.3.3-1_amd64.deb ... 123s Unpacking r-cran-ragg (1.3.3-1) ... 123s Selecting previously unselected package r-cran-ggrastr. 123s Preparing to unpack .../304-r-cran-ggrastr_1.0.2-1_all.deb ... 123s Unpacking r-cran-ggrastr (1.0.2-1) ... 123s Selecting previously unselected package r-cran-ggrepel. 123s Preparing to unpack .../305-r-cran-ggrepel_0.9.6-1_amd64.deb ... 123s Unpacking r-cran-ggrepel (0.9.6-1) ... 123s Selecting previously unselected package r-cran-ggridges. 123s Preparing to unpack .../306-r-cran-ggridges_0.5.6-1_all.deb ... 123s Unpacking r-cran-ggridges (0.5.6-1) ... 123s Selecting previously unselected package r-cran-goftest. 123s Preparing to unpack .../307-r-cran-goftest_1.2-3-1_amd64.deb ... 123s Unpacking r-cran-goftest (1.2-3-1) ... 123s Selecting previously unselected package r-cran-gplots. 123s Preparing to unpack .../308-r-cran-gplots_3.2.0-1_all.deb ... 123s Unpacking r-cran-gplots (3.2.0-1) ... 123s Selecting previously unselected package r-cran-hdf5r. 123s Preparing to unpack .../309-r-cran-hdf5r_1.3.12+dfsg-1_amd64.deb ... 123s Unpacking r-cran-hdf5r (1.3.12+dfsg-1) ... 123s Selecting previously unselected package r-cran-rprojroot. 123s Preparing to unpack .../310-r-cran-rprojroot_2.0.4-2_all.deb ... 123s Unpacking r-cran-rprojroot (2.0.4-2) ... 123s Selecting previously unselected package r-cran-here. 123s Preparing to unpack .../311-r-cran-here_1.0.1-2_all.deb ... 123s Unpacking r-cran-here (1.0.1-2) ... 123s Selecting previously unselected package r-cran-ica. 123s Preparing to unpack .../312-r-cran-ica_1.0-3-1_all.deb ... 123s Unpacking r-cran-ica (1.0-3-1) ... 123s Selecting previously unselected package r-cran-kernlab. 123s Preparing to unpack .../313-r-cran-kernlab_0.9-33-1_amd64.deb ... 123s Unpacking r-cran-kernlab (0.9-33-1) ... 123s Selecting previously unselected package r-cran-rcpptoml. 123s Preparing to unpack .../314-r-cran-rcpptoml_0.2.2+dfsg-1_amd64.deb ... 123s Unpacking r-cran-rcpptoml (0.2.2+dfsg-1) ... 123s Selecting previously unselected package r-cran-reticulate. 123s Preparing to unpack .../315-r-cran-reticulate_1.39.0+dfsg-1_amd64.deb ... 123s Unpacking r-cran-reticulate (1.39.0+dfsg-1) ... 123s Selecting previously unselected package r-cran-leiden. 123s Preparing to unpack .../316-r-cran-leiden_0.4.3.1+dfsg-1_all.deb ... 123s Unpacking r-cran-leiden (0.4.3.1+dfsg-1) ... 123s Selecting previously unselected package r-cran-zoo. 123s Preparing to unpack .../317-r-cran-zoo_1.8-12-2_amd64.deb ... 123s Unpacking r-cran-zoo (1.8-12-2) ... 123s Selecting previously unselected package r-cran-lmtest. 123s Preparing to unpack .../318-r-cran-lmtest_0.9.40-1_amd64.deb ... 123s Unpacking r-cran-lmtest (0.9.40-1) ... 123s Selecting previously unselected package r-cran-mathjaxr. 123s Preparing to unpack .../319-r-cran-mathjaxr_1.6-0-1_all.deb ... 123s Unpacking r-cran-mathjaxr (1.6-0-1) ... 124s Selecting previously unselected package r-cran-matrixmodels. 124s Preparing to unpack .../320-r-cran-matrixmodels_0.5-3-1_all.deb ... 124s Unpacking r-cran-matrixmodels (0.5-3-1) ... 124s Selecting previously unselected package r-cran-rbibutils. 124s Preparing to unpack .../321-r-cran-rbibutils_2.3-1_amd64.deb ... 124s Unpacking r-cran-rbibutils (2.3-1) ... 124s Selecting previously unselected package r-cran-rdpack. 124s Preparing to unpack .../322-r-cran-rdpack_2.6.2-1_all.deb ... 124s Unpacking r-cran-rdpack (2.6.2-1) ... 124s Selecting previously unselected package r-cran-mnormt. 124s Preparing to unpack .../323-r-cran-mnormt_2.1.1-2_amd64.deb ... 124s Unpacking r-cran-mnormt (2.1.1-2) ... 124s Selecting previously unselected package r-cran-sparsem. 124s Preparing to unpack .../324-r-cran-sparsem_1.84-2-1_amd64.deb ... 124s Unpacking r-cran-sparsem (1.84-2-1) ... 124s Selecting previously unselected package r-cran-quantreg. 124s Preparing to unpack .../325-r-cran-quantreg_6.00-1_amd64.deb ... 124s Unpacking r-cran-quantreg (6.00-1) ... 124s Selecting previously unselected package r-cran-sn. 124s Preparing to unpack .../326-r-cran-sn_2.1.1-2_all.deb ... 124s Unpacking r-cran-sn (2.1.1-2) ... 124s Selecting previously unselected package r-cran-mvtnorm. 124s Preparing to unpack .../327-r-cran-mvtnorm_1.3-3-1_amd64.deb ... 124s Unpacking r-cran-mvtnorm (1.3-3-1) ... 124s Selecting previously unselected package r-cran-tfisher. 124s Preparing to unpack .../328-r-cran-tfisher_0.2.0-3_all.deb ... 124s Unpacking r-cran-tfisher (0.2.0-3) ... 124s Selecting previously unselected package r-cran-plotrix. 124s Preparing to unpack .../329-r-cran-plotrix_3.8-4-1_all.deb ... 124s Unpacking r-cran-plotrix (3.8-4-1) ... 124s Selecting previously unselected package r-cran-th.data. 124s Preparing to unpack .../330-r-cran-th.data_1.1-3-1_all.deb ... 124s Unpacking r-cran-th.data (1.1-3-1) ... 124s Selecting previously unselected package r-cran-sandwich. 124s Preparing to unpack .../331-r-cran-sandwich_3.1-1-1_all.deb ... 124s Unpacking r-cran-sandwich (3.1-1-1) ... 124s Selecting previously unselected package r-cran-multcomp. 124s Preparing to unpack .../332-r-cran-multcomp_1.4-28-1_all.deb ... 124s Unpacking r-cran-multcomp (1.4-28-1) ... 124s Selecting previously unselected package r-cran-mutoss. 124s Preparing to unpack .../333-r-cran-mutoss_0.1-13-1_all.deb ... 124s Unpacking r-cran-mutoss (0.1-13-1) ... 124s Selecting previously unselected package r-cran-robustbase. 124s Preparing to unpack .../334-r-cran-robustbase_0.99-4-1-1_amd64.deb ... 124s Unpacking r-cran-robustbase (0.99-4-1-1) ... 124s Selecting previously unselected package r-cran-qqconf. 124s Preparing to unpack .../335-r-cran-qqconf_1.3.2+dfsg-1_amd64.deb ... 124s Unpacking r-cran-qqconf (1.3.2+dfsg-1) ... 124s Selecting previously unselected package r-cran-metap. 124s Preparing to unpack .../336-r-cran-metap_1.11-2_all.deb ... 124s Unpacking r-cran-metap (1.11-2) ... 124s Selecting previously unselected package r-cran-plotly. 124s Preparing to unpack .../337-r-cran-plotly_4.10.4+dfsg-2_all.deb ... 124s Unpacking r-cran-plotly (4.10.4+dfsg-2) ... 125s Selecting previously unselected package r-cran-segmented. 125s Preparing to unpack .../338-r-cran-segmented_2.1-3-1_all.deb ... 125s Unpacking r-cran-segmented (2.1-3-1) ... 125s Selecting previously unselected package r-cran-mixtools. 125s Preparing to unpack .../339-r-cran-mixtools_2.0.0-1_amd64.deb ... 125s Unpacking r-cran-mixtools (2.0.0-1) ... 125s Selecting previously unselected package r-cran-patchwork. 125s Preparing to unpack .../340-r-cran-patchwork_1.3.0-1_all.deb ... 125s Unpacking r-cran-patchwork (1.3.0-1) ... 125s Selecting previously unselected package r-cran-pbapply. 125s Preparing to unpack .../341-r-cran-pbapply_1.7-2-1_all.deb ... 125s Unpacking r-cran-pbapply (1.7-2-1) ... 125s Selecting previously unselected package r-cran-pkgbuild. 125s Preparing to unpack .../342-r-cran-pkgbuild_1.4.6-1_all.deb ... 125s Unpacking r-cran-pkgbuild (1.4.6-1) ... 125s Selecting previously unselected package r-cran-pkgload. 125s Preparing to unpack .../343-r-cran-pkgload_1.4.0-1_all.deb ... 125s Unpacking r-cran-pkgload (1.4.0-1) ... 125s Selecting previously unselected package r-cran-polyclip. 125s Preparing to unpack .../344-r-cran-polyclip_1.10-7-1_amd64.deb ... 125s Unpacking r-cran-polyclip (1.10-7-1) ... 125s Selecting previously unselected package r-cran-praise. 125s Preparing to unpack .../345-r-cran-praise_1.0.0-4build1_all.deb ... 125s Unpacking r-cran-praise (1.0.0-4build1) ... 125s Selecting previously unselected package r-cran-r.methodss3. 125s Preparing to unpack .../346-r-cran-r.methodss3_1.8.2-1_all.deb ... 125s Unpacking r-cran-r.methodss3 (1.8.2-1) ... 125s Selecting previously unselected package r-cran-r.oo. 125s Preparing to unpack .../347-r-cran-r.oo_1.27.0-1_all.deb ... 125s Unpacking r-cran-r.oo (1.27.0-1) ... 125s Selecting previously unselected package r-cran-r.utils. 125s Preparing to unpack .../348-r-cran-r.utils_2.12.3-1_all.deb ... 125s Unpacking r-cran-r.utils (2.12.3-1) ... 125s Selecting previously unselected package r-cran-rcppannoy. 125s Preparing to unpack .../349-r-cran-rcppannoy_0.0.22-1_amd64.deb ... 125s Unpacking r-cran-rcppannoy (0.0.22-1) ... 125s Selecting previously unselected package r-cran-rcpphnsw. 125s Preparing to unpack .../350-r-cran-rcpphnsw_0.6.0+ds-1_amd64.deb ... 125s Unpacking r-cran-rcpphnsw (0.6.0+ds-1) ... 125s Selecting previously unselected package r-cran-rcppprogress. 125s Preparing to unpack .../351-r-cran-rcppprogress_0.4.2-2build1_all.deb ... 125s Unpacking r-cran-rcppprogress (0.4.2-2build1) ... 125s Selecting previously unselected package r-cran-rocr. 125s Preparing to unpack .../352-r-cran-rocr_1.0-11-3_all.deb ... 125s Unpacking r-cran-rocr (1.0-11-3) ... 125s Selecting previously unselected package r-cran-rspectra. 125s Preparing to unpack .../353-r-cran-rspectra_0.16-2-1_amd64.deb ... 125s Unpacking r-cran-rspectra (0.16-2-1) ... 125s Selecting previously unselected package r-cran-rsvd. 125s Preparing to unpack .../354-r-cran-rsvd_1.0.5-1_all.deb ... 125s Unpacking r-cran-rsvd (1.0.5-1) ... 125s Selecting previously unselected package r-cran-scattermore. 125s Preparing to unpack .../355-r-cran-scattermore_1.2-1_amd64.deb ... 125s Unpacking r-cran-scattermore (1.2-1) ... 125s Selecting previously unselected package r-cran-sctransform. 125s Preparing to unpack .../356-r-cran-sctransform_0.4.1-1_amd64.deb ... 125s Unpacking r-cran-sctransform (0.4.1-1) ... 125s Selecting previously unselected package r-cran-sp. 125s Preparing to unpack .../357-r-cran-sp_1%3a2.1-4+dfsg-1_amd64.deb ... 125s Unpacking r-cran-sp (1:2.1-4+dfsg-1) ... 125s Selecting previously unselected package r-cran-spam. 125s Preparing to unpack .../358-r-cran-spam_2.11-1-1_amd64.deb ... 125s Unpacking r-cran-spam (2.11-1-1) ... 125s Selecting previously unselected package r-cran-seuratobject. 125s Preparing to unpack .../359-r-cran-seuratobject_5.0.2-1_amd64.deb ... 125s Unpacking r-cran-seuratobject (5.0.2-1) ... 125s Selecting previously unselected package r-cran-spatstat.utils. 125s Preparing to unpack .../360-r-cran-spatstat.utils_3.1-2-1_amd64.deb ... 125s Unpacking r-cran-spatstat.utils (3.1-2-1) ... 126s Selecting previously unselected package r-cran-spatstat.data. 126s Preparing to unpack .../361-r-cran-spatstat.data_3.1-4-1_all.deb ... 126s Unpacking r-cran-spatstat.data (3.1-4-1) ... 126s Selecting previously unselected package r-cran-spatstat.geom. 126s Preparing to 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Setting up r-bioc-xvector (0.46.0-2) ... 130s Setting up r-cran-pkgbuild (1.4.6-1) ... 130s Setting up r-cran-hardhat (1.4.0+dfsg-1) ... 130s Setting up r-cran-dplyr (1.1.4-4) ... 130s Setting up r-cran-rspectra (0.16-2-1) ... 130s Setting up r-cran-gplots (3.2.0-1) ... 130s Setting up r-cran-uwot (0.2.2-2) ... 130s Setting up r-cran-leiden (0.4.3.1+dfsg-1) ... 130s Setting up r-bioc-multtest (2.62.0-2) ... 130s Setting up r-cran-pheatmap (1.0.12-2build1) ... 130s Setting up r-cran-lubridate (1.9.4+dfsg-1) ... 130s Setting up r-cran-pkgload (1.4.0-1) ... 130s Setting up r-cran-r.utils (2.12.3-1) ... 130s Setting up r-cran-rocr (1.0-11-3) ... 130s Setting up r-cran-prodlim (2024.06.25-1) ... 130s Setting up r-cran-fitdistrplus (1.2-2-1) ... 130s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 130s Setting up r-bioc-sparsearray (1.6.1+dfsg-1) ... 130s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 130s Setting up r-cran-scattermore (1.2-1) ... 130s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 130s Setting up r-cran-rpart (4.1.24-1) ... 130s Setting up r-cran-spatstat.random (3.2-3-1) ... 130s Setting up r-cran-textshaping (0.3.7-2) ... 130s Setting up r-cran-ipred (0.9-15-1) ... 130s Setting up r-cran-viridis (0.6.5-1) ... 130s Setting up r-cran-testthat (3.2.1.1-1) ... 130s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 130s Setting up r-cran-bslib (0.8.0+dfsg-1) ... 130s Setting up r-cran-ragg (1.3.3-1) ... 130s Setting up r-cran-spatstat.explore (3.2-7-1) ... 130s Setting up r-cran-ggrepel (0.9.6-1) ... 130s Setting up r-cran-tidyr (1.3.1-1) ... 130s Setting up r-cran-recipes (1.1.0+dfsg-1) ... 130s Setting up r-cran-mutoss (0.1-13-1) ... 130s Setting up r-cran-ggridges (0.5.6-1) ... 130s Setting up r-cran-ggbeeswarm (0.7.2-1) ... 130s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 130s Setting up r-cran-cowplot (1.1.3+dfsg-1) ... 130s Setting up r-cran-sctransform (0.4.1-1) ... 130s Setting up r-cran-patchwork (1.3.0-1) ... 130s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 130s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 130s Setting up r-cran-caret (7.0-1+dfsg-1) ... 130s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 130s Setting up r-bioc-monocle (2.34.0-2) ... 130s Setting up r-cran-shinyjs (2.1.0-1) ... 130s Setting up r-cran-miniui (0.1.1.1-3build1) ... 130s Setting up r-cran-ggrastr (1.0.2-1) ... 130s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 130s Setting up r-cran-conquer (1.3.3-1) ... 130s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... 130s Setting up r-cran-crosstalk (1.2.1+dfsg-1) ... 130s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 130s Setting up r-cran-quantreg (6.00-1) ... 130s Setting up r-cran-sn (2.1.1-2) ... 130s Setting up r-bioc-deseq2 (1.46.0+dfsg-2) ... 130s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 130s Setting up r-cran-colourpicker (1.3.0+dfsg-1) ... 130s Setting up r-cran-tfisher (0.2.0-3) ... 130s Setting up r-bioc-genomicalignments (1.42.0-2) ... 130s Setting up r-cran-metap (1.11-2) ... 130s Setting up r-bioc-rtracklayer (1.66.0-2) ... 130s Setting up r-bioc-singlecellexperiment (1.28.1+ds-2) ... 130s Setting up r-cran-plotly (4.10.4+dfsg-2) ... 130s Setting up r-cran-mixtools (2.0.0-1) ... 130s Setting up r-cran-seurat (5.0.1-1) ... 130s Processing triggers for man-db (2.13.0-1) ... 130s Processing triggers for install-info (7.1.1-1) ... 130s Processing triggers for libc-bin (2.41-1ubuntu1) ... 131s autopkgtest [22:33:55]: test run-unit-test: [----------------------- 131s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 131s BEGIN TEST testthat.R 131s 131s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 131s Copyright (C) 2024 The R Foundation for Statistical Computing 131s Platform: x86_64-pc-linux-gnu 131s 131s R is free software and comes with ABSOLUTELY NO WARRANTY. 131s You are welcome to redistribute it under certain conditions. 131s Type 'license()' or 'licence()' for distribution details. 131s 131s R is a collaborative project with many contributors. 131s Type 'contributors()' for more information and 131s 'citation()' on how to cite R or R packages in publications. 131s 131s Type 'demo()' for some demos, 'help()' for on-line help, or 131s 'help.start()' for an HTML browser interface to help. 131s Type 'q()' to quit R. 131s 131s > library(testthat) 131s > library(Seurat) 131s Loading required package: SeuratObject 131s Loading required package: sp 133s ‘SeuratObject’ was built under R 4.4.1 but the current version is 133s 4.4.2; it is recomended that you reinstall ‘SeuratObject’ as the ABI 133s for R may have changed 133s ‘SeuratObject’ was built with package ‘Matrix’ 1.7.0 but the current 133s version is 1.7.2; it is recomended that you reinstall ‘SeuratObject’ as 133s the ABI for ‘Matrix’ may have changed 133s 133s Attaching package: ‘SeuratObject’ 133s 133s The following objects are masked from ‘package:base’: 133s 133s intersect, t 133s 134s > # 134s > # # Run tests for 'v3' 134s > # message('Run tests for v3 assay') 134s > # options(Seurat.object.assay.version = 'v3') 134s > # test_check("Seurat") 134s > 134s > # Run tests for 'v5' 134s > message('Run tests for v5 assay') 134s > options(Seurat.object.assay.version = 'v5') 134s > test_check("Seurat") 134s Run tests for v5 assay 135s | | | 0% | |======================================================================| 100% 160s Performing log-normalization 160s 0% 10 20 30 40 50 60 70 80 90 100% 160s [----|----|----|----|----|----|----|----|----|----| 160s **************************************************| 160s Performing log-normalization 160s 0% 10 20 30 40 50 60 70 80 90 100% 160s [----|----|----|----|----|----|----|----|----|----| 160s **************************************************| 160s Calculating gene variances 160s 0% 10 20 30 40 50 60 70 80 90 100% 160s [----|----|----|----|----|----|----|----|----|----| 160s **************************************************| 160s Calculating feature variances of standardized and clipped values 160s 0% 10 20 30 40 50 60 70 80 90 100% 160s [----|----|----|----|----|----|----|----|----|----| 160s **************************************************| 160s Calculating gene variances 160s 0% 10 20 30 40 50 60 70 80 90 100% 160s [----|----|----|----|----|----|----|----|----|----| 160s **************************************************| 160s Calculating feature variances of standardized and clipped values 160s 0% 10 20 30 40 50 60 70 80 90 100% 160s [----|----|----|----|----|----|----|----|----|----| 160s **************************************************| 160s | | | 0% | |======================================================================| 100% 171s Performing log-normalization 171s 0% 10 20 30 40 50 60 70 80 90 100% 171s [----|----|----|----|----|----|----|----|----|----| 171s **************************************************| 171s Performing log-normalization 171s 0% 10 20 30 40 50 60 70 80 90 100% 171s [----|----|----|----|----|----|----|----|----|----| 171s **************************************************| 171s Performing log-normalization 171s 0% 10 20 30 40 50 60 70 80 90 100% 171s [----|----|----|----|----|----|----|----|----|----| 171s **************************************************| 179s Performing log-normalization 179s 0% 10 20 30 40 50 60 70 80 90 100% 179s [----|----|----|----|----|----|----|----|----|----| 179s **************************************************| 179s | | | 0% | |======================================================================| 100% 179s | | | 0% | |======================================================================| 100% 180s [ FAIL 0 | WARN 160 | SKIP 29 | PASS 542 ] 180s 180s ══ Skipped tests (29) ══════════════════════════════════════════════════════════ 180s • On CRAN (29): 'test_differential_expression.R:286:3', 180s 'test_differential_expression.R:328:3', 180s 'test_differential_expression.R:425:3', 'test_dimensional_reduction.R:55:3', 180s 'test_integratedata.R:111:3', 'test_integratedata.R:180:3', 180s 'test_integration.R:74:3', 'test_integration.R:105:3', 180s 'test_integration.R:136:3', 'test_integration.R:170:3', 180s 'test_integration.R:202:3', 'test_integration.R:234:3', 180s 'test_integration.R:264:3', 'test_integration.R:306:3', 180s 'test_integration.R:335:3', 'test_integration.R:365:3', 'test_objects.R:6:3', 180s 'test_preprocessing.R:140:3', 'test_preprocessing.R:158:3', 180s 'test_preprocessing.R:401:3', 'test_preprocessing.R:455:3', 180s 'test_preprocessing.R:477:3', 'test_read_mtx.R:4:3', 'test_read_mtx.R:18:3', 180s 'test_transferdata.R:65:3', 'test_transferdata.R:88:3', 180s 'test_transferdata.R:100:3', 'test_transferdata.R:112:3', 180s 'test_transferdata.R:128:3' 180s 180s [ FAIL 0 | WARN 160 | SKIP 29 | PASS 542 ] 180s > 180s > 180s > 180s autopkgtest [22:34:44]: test run-unit-test: -----------------------] 181s autopkgtest [22:34:45]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 181s run-unit-test PASS 181s autopkgtest [22:34:45]: test pkg-r-autopkgtest: preparing testbed 263s autopkgtest [22:36:07]: testbed dpkg architecture: amd64 263s autopkgtest [22:36:07]: testbed apt version: 2.9.28 264s autopkgtest [22:36:08]: @@@@@@@@@@@@@@@@@@@@ test bed setup 264s autopkgtest [22:36:08]: testbed release detected to be: plucky 268s autopkgtest [22:36:12]: updating testbed package index (apt update) 269s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [110 kB] 269s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 269s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 269s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 269s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [13.1 kB] 269s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [3120 B] 269s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [74.3 kB] 269s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [828 kB] 270s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [175 kB] 270s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [154 kB] 270s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [7984 B] 270s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/restricted i386 Packages [2412 B] 270s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [949 kB] 271s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [403 kB] 271s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [3520 B] 271s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [10.3 kB] 271s Fetched 2734 kB in 2s (1168 kB/s) 272s Reading package lists... 272s + lsb_release --codename --short 272s + RELEASE=plucky 272s + cat 272s + [ plucky != trusty ] 272s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 272s Reading package lists... 272s Building dependency tree... 272s Reading state information... 273s Calculating upgrade... 273s The following packages will be upgraded: 273s libtasn1-6 273s 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 273s Need to get 51.2 kB of archives. 273s After this operation, 22.5 kB of additional disk space will be used. 273s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libtasn1-6 amd64 4.20.0-2 [51.2 kB] 273s Fetched 51.2 kB in 0s (184 kB/s) 274s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108914 files and directories currently installed.) 274s Preparing to unpack .../libtasn1-6_4.20.0-2_amd64.deb ... 274s Unpacking libtasn1-6:amd64 (4.20.0-2) over (4.19.0-3build1) ... 274s Setting up libtasn1-6:amd64 (4.20.0-2) ... 274s Processing triggers for libc-bin (2.40-4ubuntu1) ... 274s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 274s + /usr/lib/apt/apt-helper analyze-pattern ?true 274s + uname -r 274s + sed s/\./\\./g 274s + running_kernel_pattern=^linux-.*6\.12\.0-15-generic.* 274s + apt list ?obsolete 274s + + tail -n+2 274s grep -v ^linux-.*6\.12\.0-15-generic.* 274s + cut -d/ -f1 274s + true 274s + obsolete_pkgs= 274s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove 274s Reading package lists... 274s Building dependency tree... 274s Reading state information... 275s 0 upgraded, 0 newly installed, 0 to remove and 6 not upgraded. 275s + grep -q trusty /etc/lsb-release 275s + [ ! -d /usr/share/doc/unattended-upgrades ] 275s + [ ! -d /usr/share/doc/lxd ] 275s + [ ! -d /usr/share/doc/lxd-client ] 275s + [ ! -d /usr/share/doc/snapd ] 275s + type iptables 275s + cat 275s + chmod 755 /etc/rc.local 275s + . /etc/rc.local 275s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 275s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 275s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 275s + uname -m 275s + [ x86_64 = ppc64le ] 275s + [ -d /run/systemd/system ] 275s + systemd-detect-virt --quiet --vm 275s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 275s + cat 275s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 275s + echo COMPRESS=lz4 275s autopkgtest [22:36:19]: upgrading testbed (apt dist-upgrade and autopurge) 275s Reading package lists... 275s Building dependency tree... 275s Reading state information... 275s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 275s Starting 2 pkgProblemResolver with broken count: 0 275s Done 276s Entering ResolveByKeep 276s 276s The following packages will be upgraded: 276s iproute2 libc-bin libc-dev-bin libc6 libc6-dev locales 277s 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 277s Need to get 11.8 MB of archives. 277s After this operation, 746 kB of additional disk space will be used. 277s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-dev-bin amd64 2.41-1ubuntu1 [24.7 kB] 277s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6-dev amd64 2.41-1ubuntu1 [2182 kB] 279s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 locales all 2.41-1ubuntu1 [4246 kB] 280s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6 amd64 2.41-1ubuntu1 [3327 kB] 280s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-bin amd64 2.41-1ubuntu1 [701 kB] 281s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 iproute2 amd64 6.13.0-1ubuntu1 [1277 kB] 281s Preconfiguring packages ... 281s Fetched 11.8 MB in 4s (2710 kB/s) 281s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108914 files and directories currently installed.) 281s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu1_amd64.deb ... 281s Unpacking libc-dev-bin (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 281s Preparing to unpack .../libc6-dev_2.41-1ubuntu1_amd64.deb ... 281s Unpacking libc6-dev:amd64 (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 281s Preparing to unpack .../locales_2.41-1ubuntu1_all.deb ... 281s Unpacking locales (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 282s Preparing to unpack .../libc6_2.41-1ubuntu1_amd64.deb ... 282s Checking for services that may need to be restarted... 282s Checking init scripts... 282s Checking for services that may need to be restarted... 282s Checking init scripts... 282s Stopping some services possibly affected by the upgrade (will be restarted later): 282s cron: stopping...done. 282s 282s Unpacking libc6:amd64 (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 282s Setting up libc6:amd64 (2.41-1ubuntu1) ... 282s Checking for services that may need to be restarted... 282s Checking init scripts... 282s Restarting services possibly affected by the upgrade: 282s cron: restarting...done. 282s 282s Services restarted successfully. 282s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108915 files and directories currently installed.) 282s Preparing to unpack .../libc-bin_2.41-1ubuntu1_amd64.deb ... 282s Unpacking libc-bin (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 282s Setting up libc-bin (2.41-1ubuntu1) ... 282s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108915 files and directories currently installed.) 282s Preparing to unpack .../iproute2_6.13.0-1ubuntu1_amd64.deb ... 283s Unpacking iproute2 (6.13.0-1ubuntu1) over (6.10.0-2ubuntu1) ... 283s Setting up iproute2 (6.13.0-1ubuntu1) ... 283s Setting up locales (2.41-1ubuntu1) ... 283s Installing new version of config file /etc/locale.alias ... 283s Generating locales (this might take a while)... 285s en_US.UTF-8... done 285s Generation complete. 285s Setting up libc-dev-bin (2.41-1ubuntu1) ... 285s Setting up libc6-dev:amd64 (2.41-1ubuntu1) ... 285s Processing triggers for man-db (2.13.0-1) ... 286s Processing triggers for systemd (257.2-3ubuntu1) ... 287s Reading package lists... 288s Building dependency tree... 288s Reading state information... 288s Starting pkgProblemResolver with broken count: 0 288s Starting 2 pkgProblemResolver with broken count: 0 288s Done 288s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 295s Reading package lists... 295s Building dependency tree... 295s Reading state information... 295s Starting pkgProblemResolver with broken count: 0 295s Starting 2 pkgProblemResolver with broken count: 0 295s Done 296s The following NEW packages will be installed: 296s build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu 296s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 296s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-14 296s g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 296s gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-14 296s gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools 296s javascript-common libamd3 libasan8 libblas-dev libblas3 libboost-dev 296s libboost1.83-dev libbz2-dev libcairo2 libcc1-0 libcolamd3 libdatrie1 296s libdeflate-dev libdeflate0 libfftw3-double3 libfontconfig1 libgcc-14-dev 296s libgfortran-14-dev libgfortran5 libglpk40 libgomp1 libgraphite2-3 296s libharfbuzz0b libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 296s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 296s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 296s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 296s libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js 296s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 296s libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 liblerc4 296s liblsan0 libltdl7 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev 296s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 296s libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 296s libpixman-1-0 libpkgconf3 libpng-dev libquadmath0 libreadline-dev 296s libsharpyuv0 libsm6 libstdc++-14-dev libsuitesparseconfig7 libtcl8.6 296s libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 296s libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 296s littler node-bootstrap-sass node-html5shiv node-normalize.css pandoc 296s pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 296s r-bioc-biobase r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 296s r-bioc-biostrings r-bioc-delayedarray r-bioc-deseq2 r-bioc-genomeinfodb 296s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicranges 296s r-bioc-iranges r-bioc-limma r-bioc-matrixgenerics r-bioc-multtest 296s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 296s r-bioc-s4vectors r-bioc-sparsearray r-bioc-summarizedexperiment 296s r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-ape 296s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-bitops r-cran-brio 296s r-cran-bslib r-cran-cachem r-cran-callr r-cran-caret r-cran-catools 296s r-cran-class r-cran-cli r-cran-clock r-cran-cluster r-cran-codetools 296s r-cran-colorspace r-cran-colourpicker r-cran-commonmark r-cran-conquer 296s r-cran-cowplot r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl 296s r-cran-data.table r-cran-deldir r-cran-deoptimr r-cran-desc r-cran-diagram 296s r-cran-diffobj r-cran-digest r-cran-dotcall64 r-cran-dplyr r-cran-dqrng 296s r-cran-e1071 r-cran-evaluate r-cran-fansi r-cran-farver r-cran-fastdummies 296s r-cran-fastmap r-cran-fitdistrplus r-cran-fnn r-cran-fontawesome 296s r-cran-foreach r-cran-formatr r-cran-fs r-cran-futile.logger 296s r-cran-futile.options r-cran-future r-cran-future.apply r-cran-gdata 296s r-cran-generics r-cran-ggplot2 r-cran-ggrepel r-cran-ggridges r-cran-globals 296s r-cran-glue r-cran-goftest r-cran-gower r-cran-gplots r-cran-gridextra 296s r-cran-gtable r-cran-gtools r-cran-hardhat r-cran-here r-cran-highr 296s r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-ica 296s r-cran-igraph r-cran-ipred r-cran-irlba r-cran-isoband r-cran-iterators 296s r-cran-jquerylib r-cran-jsonlite r-cran-kernlab r-cran-kernsmooth 296s r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later r-cran-lattice 296s r-cran-lava r-cran-lazyeval r-cran-leiden r-cran-lifecycle r-cran-listenv 296s r-cran-littler r-cran-lmtest r-cran-locfit r-cran-lubridate r-cran-magrittr 296s r-cran-mass r-cran-mathjaxr r-cran-matrix r-cran-matrixmodels 296s r-cran-matrixstats r-cran-memoise r-cran-metap r-cran-mgcv r-cran-mime 296s r-cran-miniui r-cran-mixtools r-cran-mnormt r-cran-modelmetrics 296s r-cran-multcomp r-cran-munsell r-cran-mutoss r-cran-mvtnorm r-cran-nlme 296s r-cran-nnet r-cran-numderiv r-cran-openssl r-cran-parallelly 296s r-cran-patchwork r-cran-pbapply r-cran-pillar r-cran-pkgbuild 296s r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plotly 296s r-cran-plotrix r-cran-plyr r-cran-png r-cran-polyclip r-cran-praise 296s r-cran-proc r-cran-processx r-cran-prodlim r-cran-progressr r-cran-promises 296s r-cran-proxy r-cran-ps r-cran-purrr r-cran-qqconf r-cran-quantreg 296s r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils r-cran-r6 r-cran-rann 296s r-cran-rappdirs r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp 296s r-cran-rcppannoy r-cran-rcpparmadillo r-cran-rcppeigen r-cran-rcpphnsw 296s r-cran-rcppprogress r-cran-rcpptoml r-cran-rcurl r-cran-rdpack 296s r-cran-recipes r-cran-reshape2 r-cran-restfulr r-cran-reticulate 296s r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-robustbase r-cran-rocr 296s r-cran-rpart r-cran-rprojroot r-cran-rspectra r-cran-rsvd r-cran-rtsne 296s r-cran-sandwich r-cran-sass r-cran-scales r-cran-scattermore 296s r-cran-sctransform r-cran-segmented r-cran-seurat r-cran-seuratobject 296s r-cran-shape r-cran-shiny r-cran-shinyjs r-cran-sitmo r-cran-sn r-cran-snow 296s r-cran-sourcetools r-cran-sp r-cran-spam r-cran-sparsem r-cran-spatstat.data 296s r-cran-spatstat.explore r-cran-spatstat.geom r-cran-spatstat.random 296s r-cran-spatstat.sparse r-cran-spatstat.utils r-cran-squarem r-cran-statmod 296s r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys r-cran-tensor 296s r-cran-testthat r-cran-tfisher r-cran-th.data r-cran-tibble r-cran-tidyr 296s r-cran-tidyselect r-cran-timechange r-cran-timedate r-cran-tinytex 296s r-cran-tzdb r-cran-utf8 r-cran-uwot r-cran-vctrs r-cran-vgam 296s r-cran-viridislite r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml 296s r-cran-xtable r-cran-yaml r-cran-zoo unzip x11-common xdg-utils zip 296s zlib1g-dev 296s 0 upgraded, 386 newly installed, 0 to remove and 0 not upgraded. 296s Need to get 458 MB of archives. 296s After this operation, 1320 MB of additional disk space will be used. 296s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 296s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 296s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu1 [11.9 MB] 298s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-17ubuntu1 [1032 B] 298s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [5586 B] 298s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.2.0-1ubuntu1 [22.4 kB] 298s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 14.2.0-17ubuntu1 [47.6 kB] 298s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-17ubuntu1 [148 kB] 298s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 14.2.0-17ubuntu1 [28.9 kB] 299s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 14.2.0-17ubuntu1 [2998 kB] 299s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 14.2.0-17ubuntu1 [1317 kB] 299s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 14.2.0-17ubuntu1 [2733 kB] 299s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 14.2.0-17ubuntu1 [1177 kB] 299s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 14.2.0-17ubuntu1 [1634 kB] 300s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 14.2.0-17ubuntu1 [153 kB] 300s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-17ubuntu1 [2814 kB] 300s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu1 [23.3 MB] 301s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-17ubuntu1 [536 kB] 301s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1208 B] 301s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.2.0-1ubuntu1 [5004 B] 301s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-17ubuntu1 [2507 kB] 301s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu1 [13.4 MB] 301s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-17ubuntu1 [21.8 kB] 301s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [968 B] 301s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.2.0-1ubuntu1 [1100 B] 301s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 302s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 dctrl-tools amd64 2.24-3build3 [106 kB] 302s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 302s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 302s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB] 302s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB] 302s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB] 302s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 302s Get:34 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 302s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 302s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-17ubuntu1 [910 kB] 302s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran-14-dev amd64 14.2.0-17ubuntu1 [966 kB] 302s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu1 [12.5 MB] 302s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14 amd64 14.2.0-17ubuntu1 [13.6 kB] 302s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1022 B] 302s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran amd64 4:14.2.0-1ubuntu1 [1174 B] 302s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 icu-devtools amd64 76.1-1ubuntu2 [237 kB] 302s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 11+nmu1 [5936 B] 302s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libsuitesparseconfig7 amd64 1:7.8.3+dfsg-3 [13.5 kB] 302s Get:45 http://ftpmaster.internal/ubuntu plucky/universe amd64 libamd3 amd64 1:7.8.3+dfsg-3 [31.0 kB] 302s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 302s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas-dev amd64 3.12.1-2 [338 kB] 302s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost1.83-dev amd64 1.83.0-4.1ubuntu1 [10.7 MB] 303s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost-dev amd64 1.83.0.2ubuntu1 [4468 B] 303s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libbz2-dev amd64 1.0.8-6 [33.8 kB] 303s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 303s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 303s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 303s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 303s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 303s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libcolamd3 amd64 1:7.8.3+dfsg-3 [19.5 kB] 303s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 303s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB] 303s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate-dev amd64 1.23-1 [71.7 kB] 303s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libfftw3-double3 amd64 3.3.10-2fakesync1build1 [839 kB] 303s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl7 amd64 2.5.4-3build1 [46.2 kB] 303s Get:62 http://ftpmaster.internal/ubuntu plucky/universe amd64 libglpk40 amd64 5.0-1build2 [369 kB] 303s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 303s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB] 303s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 303s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 303s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libicu-dev amd64 76.1-1ubuntu2 [12.6 MB] 303s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 303s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8-dev amd64 2.1.5-3ubuntu2 [324 kB] 303s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 303s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 303s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 303s Get:73 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 303s Get:74 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 303s Get:75 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 303s Get:76 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 303s Get:77 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 303s Get:78 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 303s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 303s Get:80 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 303s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 303s Get:82 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 303s Get:83 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 303s Get:84 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 303s Get:85 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 303s Get:86 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 303s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 304s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack-dev amd64 3.12.1-2 [6489 kB] 304s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 304s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 liblua5.4-0 amd64 5.4.7-1 [196 kB] 304s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses-dev amd64 6.5+20250125-2 [425 kB] 304s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 304s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 304s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.56.1-1 [255 kB] 304s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.56.1-1 [52.6 kB] 304s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.56.1-1 [29.1 kB] 304s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB] 304s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB] 304s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.42-4ubuntu3 [214 kB] 304s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-32-0 amd64 10.42-4ubuntu3 [201 kB] 304s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-posix3 amd64 10.42-4ubuntu3 [6768 B] 304s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-dev amd64 10.42-4ubuntu3 [747 kB] 304s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 libpkgconf3 amd64 1.8.1-4 [32.3 kB] 304s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 304s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 libpng-dev amd64 1.6.46-4 [304 kB] 304s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libreadline-dev amd64 8.2-6 [184 kB] 304s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 304s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 304s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB] 304s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 304s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 304s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 304s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 304s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 304s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB] 305s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 305s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu2 [185 kB] 305s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 305s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 305s Get:120 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.2-1build1 [28.9 MB] 306s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-2 [96.6 kB] 306s Get:122 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-2 [2554 B] 306s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 306s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 306s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 306s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 306s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc amd64 3.1.11.1+ds-2 [27.2 MB] 307s Get:128 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma-dev amd64 5.6.3-1 [189 kB] 307s Get:129 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf-bin amd64 1.8.1-4 [21.6 kB] 307s Get:130 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf amd64 1.8.1-4 [16.8 kB] 307s Get:131 http://ftpmaster.internal/ubuntu plucky/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3 [193 kB] 307s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-dev all 4.4.2-1build1 [4342 B] 307s Get:133 http://ftpmaster.internal/ubuntu plucky/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 307s Get:134 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 307s Get:135 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biobase amd64 2.66.0-2 [2332 kB] 307s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2065 kB] 307s Get:137 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 307s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-formatr all 1.14-2 [152 kB] 307s Get:139 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 307s Get:140 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 307s Get:141 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 307s Get:142 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 307s Get:143 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-codetools all 0.2-20-1 [90.5 kB] 307s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bh all 1.84.0-1 [5962 B] 307s Get:145 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cpp11 all 0.5.1-1 [233 kB] 307s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocparallel amd64 1.40.0-2 [1337 kB] 307s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-iranges amd64 2.40.1-2 [2310 kB] 307s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 307s Get:149 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-xvector amd64 0.46.0-2 [620 kB] 307s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-curl amd64 6.1.0+dfsg-1 [195 kB] 307s Get:151 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.8.9+dfsg-1 [445 kB] 307s Get:152 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 307s Get:153 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB] 307s Get:154 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB] 307s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-openssl amd64 2.2.0+dfsg-1 [405 kB] 307s Get:156 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB] 307s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 307s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 307s Get:159 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 307s Get:160 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 308s Get:161 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB] 308s Get:162 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biostrings amd64 2.74.1+dfsg-2 [13.3 MB] 308s Get:163 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 308s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrix amd64 1.7-2-1 [4456 kB] 308s Get:165 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixstats amd64 1.5.0-1 [542 kB] 308s Get:166 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 308s Get:167 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-abind all 1.4-8-1 [66.9 kB] 308s Get:168 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-s4arrays amd64 1.6.0+dfsg-2 [698 kB] 308s Get:169 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-sparsearray amd64 1.6.1+dfsg-1 [1391 kB] 309s Get:170 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-delayedarray amd64 0.32.0+dfsg-2 [2064 kB] 309s Get:171 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomicranges amd64 1.58.0+dfsg-2 [2083 kB] 309s Get:172 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 309s Get:173 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-locfit amd64 1.5-9.11-1 [550 kB] 309s Get:174 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.3-1 [1348 kB] 309s Get:175 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 309s Get:176 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.5-1 [1719 kB] 309s Get:177 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 309s Get:178 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 309s Get:179 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 309s Get:180 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mass amd64 7.3-64-1 [1114 kB] 309s Get:181 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nlme amd64 3.1.167-1 [2320 kB] 309s Get:182 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB] 309s Get:183 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB] 309s Get:184 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 309s Get:185 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colorspace amd64 2.1-1+dfsg-1 [1563 kB] 309s Get:186 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-munsell all 0.5.1-1 [213 kB] 309s Get:187 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 309s Get:188 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridislite all 0.4.2-2 [1088 kB] 309s Get:189 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scales all 1.3.0-1 [603 kB] 309s Get:190 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 309s Get:191 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 309s Get:192 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 309s Get:193 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 309s Get:194 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 309s Get:195 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 309s Get:196 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB] 309s Get:197 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 309s Get:198 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 310s Get:199 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 310s Get:200 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.14-1 [1998 kB] 310s Get:201 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpparmadillo amd64 14.2.3-1-1 [864 kB] 310s Get:202 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-deseq2 amd64 1.46.0+dfsg-2 [1250 kB] 310s Get:203 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bitops amd64 1.0-9-1 [30.3 kB] 310s Get:204 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rhtslib amd64 3.2.0+dfsg-2 [1499 kB] 310s Get:205 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rsamtools amd64 2.22.0+dfsg-2 [3745 kB] 310s Get:206 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomicalignments amd64 1.42.0-2 [2165 kB] 311s Get:207 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-statmod amd64 1.5.0-1 [295 kB] 311s Get:208 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-limma amd64 3.62.2+dfsg-1 [1969 kB] 311s Get:209 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-survival amd64 3.8-3-1 [8239 kB] 311s Get:210 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-multtest amd64 2.62.0-2 [844 kB] 311s Get:211 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xml amd64 3.99-0.18-1 [1748 kB] 311s Get:212 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcurl amd64 1.98-1.16+dfsg-1 [807 kB] 311s Get:213 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rjson amd64 0.2.23-1 [104 kB] 311s Get:214 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB] 311s Get:215 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-restfulr amd64 0.0.15-1 [380 kB] 311s Get:216 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rtracklayer amd64 1.66.0-2 [5227 kB] 311s Get:217 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB] 311s Get:218 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ape amd64 5.8-1-1 [2918 kB] 311s Get:219 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 311s Get:220 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 311s Get:221 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 311s Get:222 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 311s Get:223 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 311s Get:224 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 311s Get:225 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 311s Get:226 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB] 311s Get:227 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 311s Get:228 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 311s Get:229 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 311s Get:230 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ps amd64 1.8.1-1 [397 kB] 311s Get:231 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-processx amd64 3.8.5-1 [356 kB] 311s Get:232 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 311s Get:233 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-class amd64 7.3-23-1 [92.7 kB] 311s Get:234 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB] 311s Get:235 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-e1071 amd64 1.7-16-1 [565 kB] 311s Get:236 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-iterators all 1.0.14-1 [336 kB] 311s Get:237 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-foreach all 1.5.2-1 [124 kB] 311s Get:238 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-data.table amd64 1.16.4+dfsg-1 [2032 kB] 311s Get:239 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-modelmetrics amd64 1.2.2.2-1build1 [128 kB] 311s Get:240 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB] 311s Get:241 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proc amd64 1.18.5-1 [966 kB] 311s Get:242 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB] 311s Get:243 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB] 311s Get:244 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB] 312s Get:245 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tzdb amd64 0.4.0-2 [521 kB] 312s Get:246 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-clock amd64 0.7.1-1 [1804 kB] 312s Get:247 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gower amd64 1.0.2-1 [210 kB] 312s Get:248 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-hardhat all 1.4.0+dfsg-1 [565 kB] 312s Get:249 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rpart amd64 4.1.24-1 [670 kB] 312s Get:250 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nnet amd64 7.3-20-1 [116 kB] 312s Get:251 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shape all 1.4.6.1-1 [749 kB] 312s Get:252 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diagram all 1.6.5-2 [656 kB] 312s Get:253 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernsmooth amd64 2.23-26-1 [94.5 kB] 312s Get:254 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-globals all 0.16.3-1 [120 kB] 312s Get:255 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-listenv all 0.9.1+dfsg-1 [112 kB] 312s Get:256 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-parallelly amd64 1.42.0-1 [540 kB] 312s Get:257 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-future all 1.34.0+dfsg-1 [646 kB] 312s Get:258 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-future.apply all 1.11.3+dfsg-1 [175 kB] 312s Get:259 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-numderiv all 2016.8-1.1-3 [115 kB] 312s Get:260 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-progressr all 0.15.1-1 [353 kB] 312s Get:261 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-squarem all 2021.1-1 [179 kB] 312s Get:262 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lava all 1.8.1+dfsg-1 [2191 kB] 312s Get:263 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-prodlim amd64 2024.06.25-1 [415 kB] 312s Get:264 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ipred amd64 0.9-15-1 [386 kB] 312s Get:265 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-timechange amd64 0.3.0-1 [178 kB] 312s Get:266 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lubridate amd64 1.9.4+dfsg-1 [1009 kB] 312s Get:267 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-purrr amd64 1.0.2-1 [502 kB] 312s Get:268 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringi amd64 1.8.4-1build1 [927 kB] 312s Get:269 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 312s Get:270 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 312s Get:271 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-timedate amd64 4041.110-1 [1208 kB] 312s Get:272 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-recipes all 1.1.0+dfsg-1 [2035 kB] 312s Get:273 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reshape2 amd64 1.4.4-2build1 [114 kB] 312s Get:274 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-caret amd64 7.0-1+dfsg-1 [3460 kB] 312s Get:275 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-catools amd64 1.18.2-1 [201 kB] 312s Get:276 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cluster amd64 2.1.8-1 [579 kB] 312s Get:277 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 1.0.3-1 [114 kB] 312s Get:278 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xfun amd64 0.50+dfsg-1 [568 kB] 312s Get:279 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 312s Get:280 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 312s Get:281 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 312s Get:282 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 312s Get:283 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tinytex all 0.54-1 [147 kB] 312s Get:284 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-modernizr all 3.13.0-0.1 [101 kB] 312s Get:285 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB] 312s Get:286 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB] 312s Get:287 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 312s Get:288 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 312s Get:289 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 312s Get:290 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.2-2 [137 kB] 312s Get:291 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 312s Get:292 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 312s Get:293 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 313s Get:294 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 313s Get:295 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-miniui all 0.1.1.1-3build1 [36.1 kB] 313s Get:296 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shinyjs all 2.1.0-1 [967 kB] 313s Get:297 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colourpicker all 1.3.0+dfsg-1 [1191 kB] 313s Get:298 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-conquer amd64 1.3.3-1 [499 kB] 313s Get:299 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cowplot all 1.1.3+dfsg-1 [614 kB] 313s Get:300 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lazyeval amd64 0.2.2-1build1 [144 kB] 313s Get:301 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 313s Get:302 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-deldir amd64 2.0-4-1build1 [270 kB] 313s Get:303 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-deoptimr all 1.1-3-1-1 [76.6 kB] 313s Get:304 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 313s Get:305 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 313s Get:306 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dotcall64 amd64 1.2-1 [36.8 kB] 313s Get:307 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sitmo amd64 2.0.2-1 [130 kB] 313s Get:308 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dqrng amd64 0.3.2+dfsg-1 [161 kB] 313s Get:309 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastdummies all 1.7.5-1 [51.1 kB] 313s Get:310 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fitdistrplus all 1.2-2-1 [2287 kB] 313s Get:311 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fnn amd64 1.1.4.1-1 [126 kB] 313s Get:312 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtools amd64 3.9.5-1 [340 kB] 314s Get:313 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gdata all 3.0.1-1 [491 kB] 314s Get:314 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggrepel amd64 0.9.6-1 [270 kB] 314s Get:315 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggridges all 0.5.6-1 [2195 kB] 314s Get:316 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-goftest amd64 1.2-3-1 [59.5 kB] 314s Get:317 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gplots all 3.2.0-1 [484 kB] 314s Get:318 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gridextra all 2.3-3build1 [1024 kB] 314s Get:319 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rprojroot all 2.0.4-2 [125 kB] 314s Get:320 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-here all 1.0.1-2 [50.3 kB] 314s Get:321 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ica all 1.0-3-1 [85.4 kB] 314s Get:322 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-igraph amd64 2.1.4-1 [5357 kB] 314s Get:323 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-irlba amd64 2.3.5.1-4 [295 kB] 314s Get:324 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernlab amd64 0.9-33-1 [1947 kB] 314s Get:325 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpptoml amd64 0.2.2+dfsg-1 [110 kB] 314s Get:326 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-png amd64 0.1-8-1build2 [40.6 kB] 314s Get:327 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reticulate amd64 1.39.0+dfsg-1 [1238 kB] 314s Get:328 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-leiden all 0.4.3.1+dfsg-1 [71.9 kB] 314s Get:329 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-zoo amd64 1.8-12-2 [984 kB] 314s Get:330 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lmtest amd64 0.9.40-1 [396 kB] 314s Get:331 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mathjaxr all 1.6-0-1 [605 kB] 314s Get:332 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixmodels all 0.5-3-1 [361 kB] 314s Get:333 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rbibutils amd64 2.3-1 [1023 kB] 314s Get:334 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rdpack all 2.6.2-1 [757 kB] 314s Get:335 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mnormt amd64 2.1.1-2 [170 kB] 314s Get:336 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sparsem amd64 1.84-2-1 [813 kB] 314s Get:337 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-quantreg amd64 6.00-1 [1454 kB] 314s Get:338 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sn all 2.1.1-2 [1815 kB] 314s Get:339 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mvtnorm amd64 1.3-3-1 [923 kB] 314s Get:340 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tfisher all 0.2.0-3 [79.8 kB] 314s Get:341 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plotrix all 3.8-4-1 [1120 kB] 314s Get:342 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-th.data all 1.1-3-1 [8723 kB] 315s Get:343 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sandwich all 3.1-1-1 [1483 kB] 315s Get:344 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-multcomp all 1.4-28-1 [700 kB] 315s Get:345 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mutoss all 0.1-13-1 [1123 kB] 315s Get:346 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-robustbase amd64 0.99-4-1-1 [3038 kB] 315s Get:347 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-qqconf amd64 1.3.2+dfsg-1 [157 kB] 315s Get:348 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-metap all 1.11-2 [570 kB] 315s Get:349 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plotly all 4.10.4+dfsg-2 [3666 kB] 315s Get:350 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-segmented all 2.1-3-1 [1366 kB] 315s Get:351 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mixtools amd64 2.0.0-1 [1399 kB] 315s Get:352 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-patchwork all 1.3.0-1 [3220 kB] 315s Get:353 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pbapply all 1.7-2-1 [102 kB] 315s Get:354 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgbuild all 1.4.6-1 [213 kB] 315s Get:355 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgload all 1.4.0-1 [247 kB] 315s Get:356 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-polyclip amd64 1.10-7-1 [116 kB] 315s Get:357 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 315s Get:358 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 315s Get:359 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.oo all 1.27.0-1 [979 kB] 315s Get:360 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.utils all 2.12.3-1 [1386 kB] 315s Get:361 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rann amd64 2.6.2-1 [46.3 kB] 315s Get:362 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppannoy amd64 0.0.22-1 [235 kB] 315s Get:363 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1428 kB] 315s Get:364 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpphnsw amd64 0.6.0+ds-1 [185 kB] 315s Get:365 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppprogress all 0.4.2-2build1 [22.0 kB] 315s Get:366 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rocr all 1.0-11-3 [456 kB] 315s Get:367 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rspectra amd64 0.16-2-1 [448 kB] 315s Get:368 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rsvd all 1.0.5-1 [3589 kB] 316s Get:369 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rtsne amd64 0.17-1 [109 kB] 316s Get:370 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scattermore amd64 1.2-1 [331 kB] 316s Get:371 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sctransform amd64 0.4.1-1 [504 kB] 316s Get:372 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sp amd64 1:2.1-4+dfsg-1 [1472 kB] 316s Get:373 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spam amd64 2.11-1-1 [2756 kB] 316s Get:374 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-seuratobject amd64 5.0.2-1 [1744 kB] 316s Get:375 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.utils amd64 3.1-2-1 [383 kB] 316s Get:376 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.data all 3.1-4-1 [4047 kB] 316s Get:377 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.geom amd64 3.2-9-2 [3946 kB] 316s Get:378 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.random amd64 3.2-3-1 [1169 kB] 316s Get:379 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tensor all 1.5-4 [15.7 kB] 316s Get:380 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.sparse amd64 3.1-0-1 [221 kB] 316s Get:381 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.explore amd64 3.2-7-1 [3432 kB] 316s Get:382 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-uwot amd64 0.2.2-2 [1044 kB] 316s Get:383 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-seurat amd64 5.0.1-1 [3543 kB] 317s Get:384 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-waldo all 0.6.1-2 [150 kB] 317s Get:385 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-testthat amd64 3.2.1.1-1 [1636 kB] 317s Get:386 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vgam amd64 1.1-12-1 [7658 kB] 318s Preconfiguring packages ... 318s Fetched 458 MB in 21s (21.6 MB/s) 318s Selecting previously unselected package libisl23:amd64. 318s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108916 files and directories currently installed.) 318s Preparing to unpack .../000-libisl23_0.27-1_amd64.deb ... 318s Unpacking libisl23:amd64 (0.27-1) ... 318s Selecting previously unselected package libmpc3:amd64. 318s Preparing to unpack .../001-libmpc3_1.3.1-1build2_amd64.deb ... 318s Unpacking libmpc3:amd64 (1.3.1-1build2) ... 318s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 318s Preparing to unpack .../002-cpp-14-x86-64-linux-gnu_14.2.0-17ubuntu1_amd64.deb ... 318s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-17ubuntu1) ... 318s Selecting previously unselected package cpp-14. 318s Preparing to unpack .../003-cpp-14_14.2.0-17ubuntu1_amd64.deb ... 318s Unpacking cpp-14 (14.2.0-17ubuntu1) ... 318s Selecting previously unselected package cpp-x86-64-linux-gnu. 318s Preparing to unpack .../004-cpp-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 318s Unpacking cpp-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 318s Selecting previously unselected package cpp. 318s Preparing to unpack .../005-cpp_4%3a14.2.0-1ubuntu1_amd64.deb ... 318s Unpacking cpp (4:14.2.0-1ubuntu1) ... 318s Selecting previously unselected package libcc1-0:amd64. 318s Preparing to unpack .../006-libcc1-0_14.2.0-17ubuntu1_amd64.deb ... 318s Unpacking libcc1-0:amd64 (14.2.0-17ubuntu1) ... 318s Selecting previously unselected package libgomp1:amd64. 318s Preparing to unpack .../007-libgomp1_14.2.0-17ubuntu1_amd64.deb ... 318s Unpacking libgomp1:amd64 (14.2.0-17ubuntu1) ... 318s Selecting previously unselected package libitm1:amd64. 318s Preparing to unpack .../008-libitm1_14.2.0-17ubuntu1_amd64.deb ... 318s Unpacking libitm1:amd64 (14.2.0-17ubuntu1) ... 318s Selecting previously unselected package libasan8:amd64. 318s Preparing to unpack .../009-libasan8_14.2.0-17ubuntu1_amd64.deb ... 318s Unpacking libasan8:amd64 (14.2.0-17ubuntu1) ... 318s Selecting previously unselected package liblsan0:amd64. 318s Preparing to unpack .../010-liblsan0_14.2.0-17ubuntu1_amd64.deb ... 318s Unpacking liblsan0:amd64 (14.2.0-17ubuntu1) ... 318s Selecting previously unselected package libtsan2:amd64. 319s Preparing to unpack .../011-libtsan2_14.2.0-17ubuntu1_amd64.deb ... 319s Unpacking libtsan2:amd64 (14.2.0-17ubuntu1) ... 319s Selecting previously unselected package libubsan1:amd64. 319s Preparing to unpack .../012-libubsan1_14.2.0-17ubuntu1_amd64.deb ... 319s Unpacking libubsan1:amd64 (14.2.0-17ubuntu1) ... 319s Selecting previously unselected package libhwasan0:amd64. 319s Preparing to unpack .../013-libhwasan0_14.2.0-17ubuntu1_amd64.deb ... 319s Unpacking libhwasan0:amd64 (14.2.0-17ubuntu1) ... 319s Selecting previously unselected package libquadmath0:amd64. 319s Preparing to unpack .../014-libquadmath0_14.2.0-17ubuntu1_amd64.deb ... 319s Unpacking libquadmath0:amd64 (14.2.0-17ubuntu1) ... 319s Selecting previously unselected package libgcc-14-dev:amd64. 319s Preparing to unpack .../015-libgcc-14-dev_14.2.0-17ubuntu1_amd64.deb ... 319s Unpacking libgcc-14-dev:amd64 (14.2.0-17ubuntu1) ... 319s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 319s Preparing to unpack .../016-gcc-14-x86-64-linux-gnu_14.2.0-17ubuntu1_amd64.deb ... 319s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-17ubuntu1) ... 319s Selecting previously unselected package gcc-14. 319s Preparing to unpack .../017-gcc-14_14.2.0-17ubuntu1_amd64.deb ... 319s Unpacking gcc-14 (14.2.0-17ubuntu1) ... 319s Selecting previously unselected package gcc-x86-64-linux-gnu. 319s Preparing to unpack .../018-gcc-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 319s Unpacking gcc-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 319s Selecting previously unselected package gcc. 319s Preparing to unpack .../019-gcc_4%3a14.2.0-1ubuntu1_amd64.deb ... 319s Unpacking gcc (4:14.2.0-1ubuntu1) ... 319s Selecting previously unselected package libstdc++-14-dev:amd64. 319s Preparing to unpack .../020-libstdc++-14-dev_14.2.0-17ubuntu1_amd64.deb ... 319s Unpacking libstdc++-14-dev:amd64 (14.2.0-17ubuntu1) ... 319s Selecting previously unselected package g++-14-x86-64-linux-gnu. 319s Preparing to unpack .../021-g++-14-x86-64-linux-gnu_14.2.0-17ubuntu1_amd64.deb ... 319s Unpacking g++-14-x86-64-linux-gnu (14.2.0-17ubuntu1) ... 320s Selecting previously unselected package g++-14. 320s Preparing to unpack .../022-g++-14_14.2.0-17ubuntu1_amd64.deb ... 320s Unpacking g++-14 (14.2.0-17ubuntu1) ... 320s Selecting previously unselected package g++-x86-64-linux-gnu. 320s Preparing to unpack .../023-g++-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 320s Unpacking g++-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 320s Selecting previously unselected package g++. 320s Preparing to unpack .../024-g++_4%3a14.2.0-1ubuntu1_amd64.deb ... 320s Unpacking g++ (4:14.2.0-1ubuntu1) ... 320s Selecting previously unselected package build-essential. 320s Preparing to unpack .../025-build-essential_12.10ubuntu1_amd64.deb ... 320s Unpacking build-essential (12.10ubuntu1) ... 320s Selecting previously unselected package dctrl-tools. 320s Preparing to unpack .../026-dctrl-tools_2.24-3build3_amd64.deb ... 320s Unpacking dctrl-tools (2.24-3build3) ... 320s Selecting previously unselected package fonts-dejavu-mono. 320s Preparing to unpack .../027-fonts-dejavu-mono_2.37-8_all.deb ... 320s Unpacking fonts-dejavu-mono (2.37-8) ... 320s Selecting previously unselected package fonts-dejavu-core. 320s Preparing to unpack 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unpack .../033-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 320s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 320s Selecting previously unselected package fonts-mathjax. 320s Preparing to unpack .../034-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 320s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 320s Selecting previously unselected package libgfortran5:amd64. 320s Preparing to unpack .../035-libgfortran5_14.2.0-17ubuntu1_amd64.deb ... 320s Unpacking libgfortran5:amd64 (14.2.0-17ubuntu1) ... 320s Selecting previously unselected package libgfortran-14-dev:amd64. 320s Preparing to unpack .../036-libgfortran-14-dev_14.2.0-17ubuntu1_amd64.deb ... 320s Unpacking libgfortran-14-dev:amd64 (14.2.0-17ubuntu1) ... 320s Selecting previously unselected package gfortran-14-x86-64-linux-gnu. 320s Preparing to unpack .../037-gfortran-14-x86-64-linux-gnu_14.2.0-17ubuntu1_amd64.deb ... 320s Unpacking gfortran-14-x86-64-linux-gnu (14.2.0-17ubuntu1) ... 321s Selecting previously unselected package gfortran-14. 321s Preparing to unpack .../038-gfortran-14_14.2.0-17ubuntu1_amd64.deb ... 321s Unpacking gfortran-14 (14.2.0-17ubuntu1) ... 321s Selecting previously unselected package gfortran-x86-64-linux-gnu. 321s Preparing to unpack .../039-gfortran-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 321s Unpacking gfortran-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 321s Selecting previously unselected package gfortran. 321s Preparing to unpack .../040-gfortran_4%3a14.2.0-1ubuntu1_amd64.deb ... 321s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 321s Selecting previously unselected package icu-devtools. 321s Preparing to unpack .../041-icu-devtools_76.1-1ubuntu2_amd64.deb ... 321s Unpacking icu-devtools (76.1-1ubuntu2) ... 321s Selecting previously unselected package javascript-common. 321s Preparing to unpack .../042-javascript-common_11+nmu1_all.deb ... 321s Unpacking javascript-common (11+nmu1) ... 321s Selecting previously unselected package libsuitesparseconfig7:amd64. 321s Preparing to unpack .../043-libsuitesparseconfig7_1%3a7.8.3+dfsg-3_amd64.deb ... 321s Unpacking libsuitesparseconfig7:amd64 (1:7.8.3+dfsg-3) ... 321s Selecting previously unselected package libamd3:amd64. 321s Preparing to unpack .../044-libamd3_1%3a7.8.3+dfsg-3_amd64.deb ... 321s Unpacking libamd3:amd64 (1:7.8.3+dfsg-3) ... 321s Selecting previously unselected package libblas3:amd64. 321s Preparing to unpack .../045-libblas3_3.12.1-2_amd64.deb ... 321s Unpacking libblas3:amd64 (3.12.1-2) ... 321s Selecting previously unselected package libblas-dev:amd64. 321s Preparing to unpack .../046-libblas-dev_3.12.1-2_amd64.deb ... 321s Unpacking libblas-dev:amd64 (3.12.1-2) ... 321s Selecting previously unselected package libboost1.83-dev:amd64. 321s Preparing to unpack .../047-libboost1.83-dev_1.83.0-4.1ubuntu1_amd64.deb ... 321s Unpacking libboost1.83-dev:amd64 (1.83.0-4.1ubuntu1) ... 323s Selecting previously unselected package libboost-dev:amd64. 323s 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323s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 324s Selecting previously unselected package libcairo2:amd64. 324s Preparing to unpack .../054-libcairo2_1.18.2-2_amd64.deb ... 324s Unpacking libcairo2:amd64 (1.18.2-2) ... 324s Selecting previously unselected package libcolamd3:amd64. 324s Preparing to unpack .../055-libcolamd3_1%3a7.8.3+dfsg-3_amd64.deb ... 324s Unpacking libcolamd3:amd64 (1:7.8.3+dfsg-3) ... 324s Selecting previously unselected package libdatrie1:amd64. 324s Preparing to unpack .../056-libdatrie1_0.2.13-3build1_amd64.deb ... 324s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 324s Selecting previously unselected package libdeflate0:amd64. 324s Preparing to unpack .../057-libdeflate0_1.23-1_amd64.deb ... 324s Unpacking libdeflate0:amd64 (1.23-1) ... 324s Selecting previously unselected package libdeflate-dev:amd64. 324s Preparing to unpack .../058-libdeflate-dev_1.23-1_amd64.deb ... 324s Unpacking libdeflate-dev:amd64 (1.23-1) ... 324s Selecting previously unselected package libfftw3-double3:amd64. 324s Preparing to unpack .../059-libfftw3-double3_3.3.10-2fakesync1build1_amd64.deb ... 324s Unpacking libfftw3-double3:amd64 (3.3.10-2fakesync1build1) ... 324s Selecting previously unselected package libltdl7:amd64. 324s Preparing to unpack .../060-libltdl7_2.5.4-3build1_amd64.deb ... 324s Unpacking libltdl7:amd64 (2.5.4-3build1) ... 324s Selecting previously unselected package libglpk40:amd64. 324s Preparing to unpack .../061-libglpk40_5.0-1build2_amd64.deb ... 324s Unpacking libglpk40:amd64 (5.0-1build2) ... 324s Selecting previously unselected package libgraphite2-3:amd64. 324s Preparing to unpack .../062-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 324s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 324s Selecting previously unselected package libharfbuzz0b:amd64. 324s Preparing to unpack .../063-libharfbuzz0b_10.2.0-1_amd64.deb ... 324s Unpacking libharfbuzz0b:amd64 (10.2.0-1) ... 324s Selecting previously unselected package x11-common. 324s Preparing to unpack .../064-x11-common_1%3a7.7+23ubuntu3_all.deb ... 324s Unpacking x11-common (1:7.7+23ubuntu3) ... 324s Selecting previously unselected package libice6:amd64. 324s Preparing to unpack .../065-libice6_2%3a1.1.1-1_amd64.deb ... 324s Unpacking libice6:amd64 (2:1.1.1-1) ... 324s Selecting previously unselected package libicu-dev:amd64. 324s Preparing to unpack .../066-libicu-dev_76.1-1ubuntu2_amd64.deb ... 324s Unpacking libicu-dev:amd64 (76.1-1ubuntu2) ... 324s Selecting previously unselected package libjpeg-turbo8:amd64. 324s Preparing to unpack .../067-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ... 324s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 324s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 324s Preparing to unpack .../068-libjpeg-turbo8-dev_2.1.5-3ubuntu2_amd64.deb ... 324s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-3ubuntu2) ... 324s Selecting previously unselected package libjpeg8:amd64. 324s Preparing to unpack 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package libjs-prettify. 325s Preparing to unpack .../085-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 325s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 325s Selecting previously unselected package liblapack3:amd64. 325s Preparing to unpack .../086-liblapack3_3.12.1-2_amd64.deb ... 325s Unpacking liblapack3:amd64 (3.12.1-2) ... 325s Selecting previously unselected package liblapack-dev:amd64. 325s Preparing to unpack .../087-liblapack-dev_3.12.1-2_amd64.deb ... 325s Unpacking liblapack-dev:amd64 (3.12.1-2) ... 325s Selecting previously unselected package liblerc4:amd64. 325s Preparing to unpack .../088-liblerc4_4.0.0+ds-5ubuntu1_amd64.deb ... 325s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 325s Selecting previously unselected package liblua5.4-0:amd64. 325s Preparing to unpack .../089-liblua5.4-0_5.4.7-1_amd64.deb ... 325s Unpacking liblua5.4-0:amd64 (5.4.7-1) ... 325s Selecting previously unselected package libncurses-dev:amd64. 325s Preparing to unpack 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libreadline-dev:amd64 (8.2-6) ... 326s Selecting previously unselected package libsharpyuv0:amd64. 326s Preparing to unpack .../106-libsharpyuv0_1.5.0-0.1_amd64.deb ... 326s Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ... 326s Selecting previously unselected package libsm6:amd64. 326s Preparing to unpack .../107-libsm6_2%3a1.2.4-1_amd64.deb ... 326s Unpacking libsm6:amd64 (2:1.2.4-1) ... 326s Selecting previously unselected package libtcl8.6:amd64. 326s Preparing to unpack .../108-libtcl8.6_8.6.16+dfsg-1_amd64.deb ... 326s Unpacking libtcl8.6:amd64 (8.6.16+dfsg-1) ... 326s Selecting previously unselected package libjbig0:amd64. 326s Preparing to unpack .../109-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 326s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 326s Selecting previously unselected package libwebp7:amd64. 326s Preparing to unpack .../110-libwebp7_1.5.0-0.1_amd64.deb ... 326s Unpacking libwebp7:amd64 (1.5.0-0.1) ... 326s Selecting previously unselected package libtiff6:amd64. 326s Preparing to unpack .../111-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ... 326s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 326s Selecting previously unselected package libxft2:amd64. 326s Preparing to unpack .../112-libxft2_2.3.6-1build1_amd64.deb ... 326s Unpacking libxft2:amd64 (2.3.6-1build1) ... 326s Selecting previously unselected package libxss1:amd64. 326s Preparing to unpack .../113-libxss1_1%3a1.2.3-1build3_amd64.deb ... 326s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 326s Selecting previously unselected package libtk8.6:amd64. 326s Preparing to unpack .../114-libtk8.6_8.6.16-1_amd64.deb ... 326s Unpacking libtk8.6:amd64 (8.6.16-1) ... 326s Selecting previously unselected package libxt6t64:amd64. 326s Preparing to unpack .../115-libxt6t64_1%3a1.2.1-1.2build1_amd64.deb ... 326s Unpacking libxt6t64:amd64 (1:1.2.1-1.2build1) ... 326s Selecting previously unselected package zip. 326s Preparing to unpack .../116-zip_3.0-14ubuntu2_amd64.deb ... 326s Unpacking zip (3.0-14ubuntu2) ... 326s Selecting previously unselected package unzip. 326s Preparing to unpack .../117-unzip_6.0-28ubuntu6_amd64.deb ... 326s Unpacking unzip (6.0-28ubuntu6) ... 326s Selecting previously unselected package xdg-utils. 326s Preparing to unpack .../118-xdg-utils_1.2.1-2ubuntu1_all.deb ... 326s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 327s Selecting previously unselected package r-base-core. 327s Preparing to unpack .../119-r-base-core_4.4.2-1build1_amd64.deb ... 327s Unpacking r-base-core (4.4.2-1build1) ... 327s Selecting previously unselected package r-cran-littler. 327s Preparing to unpack .../120-r-cran-littler_0.3.20-2_amd64.deb ... 327s Unpacking r-cran-littler (0.3.20-2) ... 327s Selecting previously unselected package littler. 327s Preparing to unpack .../121-littler_0.3.20-2_all.deb ... 327s Unpacking littler (0.3.20-2) ... 327s Selecting previously unselected package node-bootstrap-sass. 327s Preparing to unpack .../122-node-bootstrap-sass_3.4.3-2_all.deb ... 327s Unpacking node-bootstrap-sass (3.4.3-2) ... 327s Selecting previously unselected package node-html5shiv. 327s Preparing to unpack .../123-node-html5shiv_3.7.3+dfsg-5_all.deb ... 327s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 327s Selecting previously unselected package node-normalize.css. 327s Preparing to unpack .../124-node-normalize.css_8.0.1-5_all.deb ... 327s Unpacking node-normalize.css (8.0.1-5) ... 327s Selecting previously unselected package pandoc-data. 327s Preparing to unpack .../125-pandoc-data_3.1.11.1-3build1_all.deb ... 327s Unpacking pandoc-data (3.1.11.1-3build1) ... 327s Selecting previously unselected package pandoc. 327s Preparing to unpack .../126-pandoc_3.1.11.1+ds-2_amd64.deb ... 327s Unpacking pandoc (3.1.11.1+ds-2) ... 328s Selecting previously unselected package liblzma-dev:amd64. 328s Preparing to unpack .../127-liblzma-dev_5.6.3-1_amd64.deb ... 328s Unpacking liblzma-dev:amd64 (5.6.3-1) ... 328s Selecting previously unselected package pkgconf-bin. 328s Preparing to unpack .../128-pkgconf-bin_1.8.1-4_amd64.deb ... 328s Unpacking pkgconf-bin (1.8.1-4) ... 328s Selecting previously unselected package pkgconf:amd64. 328s Preparing to unpack .../129-pkgconf_1.8.1-4_amd64.deb ... 328s Unpacking pkgconf:amd64 (1.8.1-4) ... 328s Selecting previously unselected package libtirpc-dev:amd64. 328s Preparing to unpack .../130-libtirpc-dev_1.3.4+ds-1.3_amd64.deb ... 328s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1.3) ... 328s Selecting previously unselected package r-base-dev. 328s Preparing to unpack .../131-r-base-dev_4.4.2-1build1_all.deb ... 328s Unpacking r-base-dev (4.4.2-1build1) ... 328s Selecting previously unselected package pkg-r-autopkgtest. 328s Preparing to unpack .../132-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 328s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 328s Selecting previously unselected package r-bioc-biocgenerics. 328s Preparing to unpack .../133-r-bioc-biocgenerics_0.52.0-2_all.deb ... 328s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 328s Selecting previously unselected package r-bioc-biobase. 328s Preparing to unpack .../134-r-bioc-biobase_2.66.0-2_amd64.deb ... 328s Unpacking r-bioc-biobase (2.66.0-2) ... 328s Selecting previously unselected package r-bioc-s4vectors. 328s Preparing to unpack .../135-r-bioc-s4vectors_0.44.0+dfsg-2_amd64.deb ... 328s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 328s Selecting previously unselected package r-bioc-biocio. 328s Preparing to unpack .../136-r-bioc-biocio_1.16.0+dfsg-2_all.deb ... 328s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ... 328s Selecting previously unselected package r-cran-formatr. 328s Preparing to unpack .../137-r-cran-formatr_1.14-2_all.deb ... 328s Unpacking r-cran-formatr (1.14-2) ... 328s Selecting previously unselected package r-cran-lambda.r. 328s Preparing to unpack .../138-r-cran-lambda.r_1.2.4-2build1_all.deb ... 328s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 328s Selecting previously unselected package r-cran-futile.options. 328s Preparing to unpack .../139-r-cran-futile.options_1.0.1-3build1_all.deb ... 328s Unpacking r-cran-futile.options (1.0.1-3build1) ... 328s Selecting previously unselected package r-cran-futile.logger. 328s Preparing to unpack .../140-r-cran-futile.logger_1.4.3-4build1_all.deb ... 328s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 329s Selecting previously unselected package r-cran-snow. 329s Preparing to unpack .../141-r-cran-snow_1%3a0.4.4-2_all.deb ... 329s Unpacking r-cran-snow (1:0.4.4-2) ... 329s Selecting previously unselected package r-cran-codetools. 329s Preparing to unpack .../142-r-cran-codetools_0.2-20-1_all.deb ... 329s Unpacking r-cran-codetools (0.2-20-1) ... 329s Selecting previously unselected package r-cran-bh. 329s Preparing to unpack .../143-r-cran-bh_1.84.0-1_all.deb ... 329s Unpacking r-cran-bh (1.84.0-1) ... 329s Selecting previously unselected package r-cran-cpp11. 329s Preparing to unpack .../144-r-cran-cpp11_0.5.1-1_all.deb ... 329s Unpacking r-cran-cpp11 (0.5.1-1) ... 329s Selecting previously unselected package r-bioc-biocparallel. 329s Preparing to unpack .../145-r-bioc-biocparallel_1.40.0-2_amd64.deb ... 329s Unpacking r-bioc-biocparallel (1.40.0-2) ... 329s Selecting previously unselected package r-bioc-iranges. 329s Preparing to unpack .../146-r-bioc-iranges_2.40.1-2_amd64.deb ... 329s Unpacking r-bioc-iranges (2.40.1-2) ... 329s Selecting previously unselected package r-bioc-zlibbioc. 329s Preparing to unpack .../147-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 329s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 329s Selecting previously unselected package r-bioc-xvector. 329s Preparing to unpack .../148-r-bioc-xvector_0.46.0-2_amd64.deb ... 329s Unpacking r-bioc-xvector (0.46.0-2) ... 329s Selecting previously unselected package r-cran-curl. 329s Preparing to unpack .../149-r-cran-curl_6.1.0+dfsg-1_amd64.deb ... 329s Unpacking r-cran-curl (6.1.0+dfsg-1) ... 329s Selecting previously unselected package r-cran-jsonlite. 329s Preparing to unpack .../150-r-cran-jsonlite_1.8.9+dfsg-1_amd64.deb ... 329s Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ... 329s Selecting previously unselected package r-cran-mime. 329s Preparing to unpack .../151-r-cran-mime_0.12-2_amd64.deb ... 329s Unpacking r-cran-mime (0.12-2) ... 329s Selecting previously unselected package r-cran-sys. 329s Preparing to unpack .../152-r-cran-sys_3.4.3-1_amd64.deb ... 329s Unpacking r-cran-sys (3.4.3-1) ... 329s Selecting previously unselected package r-cran-askpass. 329s Preparing to unpack .../153-r-cran-askpass_1.2.1-1_amd64.deb ... 329s Unpacking r-cran-askpass (1.2.1-1) ... 329s Selecting previously unselected package r-cran-openssl. 329s Preparing to unpack .../154-r-cran-openssl_2.2.0+dfsg-1_amd64.deb ... 329s Unpacking r-cran-openssl (2.2.0+dfsg-1) ... 329s Selecting previously unselected package r-cran-r6. 329s Preparing to unpack .../155-r-cran-r6_2.5.1-1_all.deb ... 329s Unpacking r-cran-r6 (2.5.1-1) ... 329s Selecting previously unselected package r-cran-httr. 329s Preparing to unpack .../156-r-cran-httr_1.4.7+dfsg-1_all.deb ... 329s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 329s Selecting previously unselected package r-bioc-ucsc.utils. 329s Preparing to unpack .../157-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 329s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 329s Selecting previously unselected package r-bioc-genomeinfodbdata. 329s Preparing to unpack .../158-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 329s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 329s Selecting previously unselected package r-bioc-genomeinfodb. 329s Preparing to unpack .../159-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 329s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 329s Selecting previously unselected package r-cran-crayon. 329s Preparing to unpack .../160-r-cran-crayon_1.5.3-1_all.deb ... 329s Unpacking r-cran-crayon (1.5.3-1) ... 329s Selecting previously unselected package r-bioc-biostrings. 329s Preparing to unpack .../161-r-bioc-biostrings_2.74.1+dfsg-2_amd64.deb ... 329s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 330s Selecting previously unselected package r-cran-lattice. 330s Preparing to unpack .../162-r-cran-lattice_0.22-6-1_amd64.deb ... 330s Unpacking r-cran-lattice (0.22-6-1) ... 330s Selecting previously unselected package r-cran-matrix. 330s Preparing to unpack .../163-r-cran-matrix_1.7-2-1_amd64.deb ... 330s Unpacking r-cran-matrix (1.7-2-1) ... 330s Selecting previously unselected package r-cran-matrixstats. 330s Preparing to unpack .../164-r-cran-matrixstats_1.5.0-1_amd64.deb ... 330s Unpacking r-cran-matrixstats (1.5.0-1) ... 330s Selecting previously unselected package r-bioc-matrixgenerics. 330s Preparing to unpack .../165-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 330s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 330s Selecting previously unselected package r-cran-abind. 330s Preparing to unpack .../166-r-cran-abind_1.4-8-1_all.deb ... 330s Unpacking r-cran-abind (1.4-8-1) ... 330s Selecting previously unselected package r-bioc-s4arrays. 330s Preparing to unpack .../167-r-bioc-s4arrays_1.6.0+dfsg-2_amd64.deb ... 330s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 330s Selecting previously unselected package r-bioc-sparsearray. 330s Preparing to unpack .../168-r-bioc-sparsearray_1.6.1+dfsg-1_amd64.deb ... 330s Unpacking r-bioc-sparsearray (1.6.1+dfsg-1) ... 330s Selecting previously unselected package r-bioc-delayedarray. 330s Preparing to unpack .../169-r-bioc-delayedarray_0.32.0+dfsg-2_amd64.deb ... 330s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 330s Selecting previously unselected package r-bioc-genomicranges. 330s Preparing to unpack .../170-r-bioc-genomicranges_1.58.0+dfsg-2_amd64.deb ... 330s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 330s Selecting previously unselected package r-bioc-summarizedexperiment. 330s Preparing to unpack .../171-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 330s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 330s Selecting previously unselected package r-cran-locfit. 330s Preparing to unpack .../172-r-cran-locfit_1.5-9.11-1_amd64.deb ... 330s Unpacking r-cran-locfit (1.5-9.11-1) ... 330s Selecting previously unselected package r-cran-cli. 330s Preparing to unpack .../173-r-cran-cli_3.6.3-1_amd64.deb ... 330s Unpacking r-cran-cli (3.6.3-1) ... 330s Selecting previously unselected package r-cran-glue. 330s Preparing to unpack .../174-r-cran-glue_1.8.0-1_amd64.deb ... 330s Unpacking r-cran-glue (1.8.0-1) ... 330s Selecting previously unselected package r-cran-rlang. 330s Preparing to unpack .../175-r-cran-rlang_1.1.5-1_amd64.deb ... 330s Unpacking r-cran-rlang (1.1.5-1) ... 330s Selecting previously unselected package r-cran-lifecycle. 330s Preparing to unpack .../176-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 330s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 330s Selecting previously unselected package r-cran-gtable. 330s Preparing to unpack .../177-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 330s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 330s Selecting previously unselected package r-cran-isoband. 330s Preparing to unpack .../178-r-cran-isoband_0.2.7-1_amd64.deb ... 330s Unpacking r-cran-isoband (0.2.7-1) ... 330s Selecting previously unselected package r-cran-mass. 330s Preparing to unpack .../179-r-cran-mass_7.3-64-1_amd64.deb ... 330s Unpacking r-cran-mass (7.3-64-1) ... 330s Selecting previously unselected package r-cran-nlme. 330s Preparing to unpack .../180-r-cran-nlme_3.1.167-1_amd64.deb ... 330s Unpacking r-cran-nlme (3.1.167-1) ... 330s Selecting previously unselected package r-cran-mgcv. 330s Preparing to unpack .../181-r-cran-mgcv_1.9-1-1_amd64.deb ... 330s Unpacking r-cran-mgcv (1.9-1-1) ... 330s Selecting previously unselected package r-cran-farver. 330s Preparing to unpack .../182-r-cran-farver_2.1.2-1_amd64.deb ... 330s Unpacking r-cran-farver (2.1.2-1) ... 331s Selecting previously unselected package r-cran-labeling. 331s Preparing to unpack .../183-r-cran-labeling_0.4.3-1_all.deb ... 331s Unpacking r-cran-labeling (0.4.3-1) ... 331s Selecting previously unselected package r-cran-colorspace. 331s Preparing to unpack .../184-r-cran-colorspace_2.1-1+dfsg-1_amd64.deb ... 331s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 331s Selecting previously unselected package r-cran-munsell. 331s Preparing to unpack .../185-r-cran-munsell_0.5.1-1_all.deb ... 331s Unpacking r-cran-munsell (0.5.1-1) ... 331s Selecting previously unselected package r-cran-rcolorbrewer. 331s Preparing to unpack .../186-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 331s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 331s Selecting previously unselected package r-cran-viridislite. 331s Preparing to unpack .../187-r-cran-viridislite_0.4.2-2_all.deb ... 331s Unpacking r-cran-viridislite (0.4.2-2) ... 331s Selecting previously unselected package r-cran-scales. 331s Preparing to unpack .../188-r-cran-scales_1.3.0-1_all.deb ... 331s Unpacking r-cran-scales (1.3.0-1) ... 331s Selecting previously unselected package r-cran-fansi. 331s Preparing to unpack .../189-r-cran-fansi_1.0.5-1_amd64.deb ... 331s Unpacking r-cran-fansi (1.0.5-1) ... 331s Selecting previously unselected package r-cran-magrittr. 331s Preparing to unpack .../190-r-cran-magrittr_2.0.3-1_amd64.deb ... 331s Unpacking r-cran-magrittr (2.0.3-1) ... 331s Selecting previously unselected package r-cran-utf8. 331s Preparing to unpack .../191-r-cran-utf8_1.2.4-1_amd64.deb ... 331s Unpacking r-cran-utf8 (1.2.4-1) ... 331s Selecting previously unselected package r-cran-vctrs. 331s Preparing to unpack .../192-r-cran-vctrs_0.6.5-1_amd64.deb ... 331s Unpacking r-cran-vctrs (0.6.5-1) ... 331s Selecting previously unselected package r-cran-pillar. 331s Preparing to unpack .../193-r-cran-pillar_1.10.1+dfsg-1_all.deb ... 331s Unpacking r-cran-pillar (1.10.1+dfsg-1) ... 331s Selecting previously unselected package r-cran-pkgconfig. 331s Preparing to unpack .../194-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 331s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 331s Selecting previously unselected package r-cran-tibble. 331s Preparing to unpack .../195-r-cran-tibble_3.2.1+dfsg-3_amd64.deb ... 331s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 331s Selecting previously unselected package r-cran-withr. 331s Preparing to unpack .../196-r-cran-withr_3.0.2+dfsg-1_all.deb ... 331s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 331s Selecting previously unselected package r-cran-ggplot2. 331s Preparing to unpack .../197-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 331s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 331s Selecting previously unselected package r-cran-pkgkitten. 331s Preparing to unpack .../198-r-cran-pkgkitten_0.2.4-1_all.deb ... 331s Unpacking r-cran-pkgkitten (0.2.4-1) ... 331s Selecting previously unselected package r-cran-rcpp. 331s Preparing to unpack .../199-r-cran-rcpp_1.0.14-1_amd64.deb ... 331s Unpacking r-cran-rcpp (1.0.14-1) ... 331s Selecting previously unselected package r-cran-rcpparmadillo. 331s Preparing to unpack .../200-r-cran-rcpparmadillo_14.2.3-1-1_amd64.deb ... 331s Unpacking r-cran-rcpparmadillo (14.2.3-1-1) ... 332s Selecting previously unselected package r-bioc-deseq2. 332s Preparing to unpack .../201-r-bioc-deseq2_1.46.0+dfsg-2_amd64.deb ... 332s Unpacking r-bioc-deseq2 (1.46.0+dfsg-2) ... 332s Selecting previously unselected package r-cran-bitops. 332s Preparing to unpack .../202-r-cran-bitops_1.0-9-1_amd64.deb ... 332s Unpacking r-cran-bitops (1.0-9-1) ... 332s Selecting previously unselected package r-bioc-rhtslib. 332s Preparing to unpack .../203-r-bioc-rhtslib_3.2.0+dfsg-2_amd64.deb ... 332s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 332s Selecting previously unselected package r-bioc-rsamtools. 332s Preparing to unpack .../204-r-bioc-rsamtools_2.22.0+dfsg-2_amd64.deb ... 332s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 332s Selecting previously unselected package r-bioc-genomicalignments. 332s Preparing to unpack .../205-r-bioc-genomicalignments_1.42.0-2_amd64.deb ... 332s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 332s Selecting previously unselected package r-cran-statmod. 332s Preparing to unpack .../206-r-cran-statmod_1.5.0-1_amd64.deb ... 332s Unpacking r-cran-statmod (1.5.0-1) ... 332s Selecting previously unselected package r-bioc-limma. 332s Preparing to unpack .../207-r-bioc-limma_3.62.2+dfsg-1_amd64.deb ... 332s Unpacking r-bioc-limma (3.62.2+dfsg-1) ... 332s Selecting previously unselected package r-cran-survival. 332s Preparing to unpack .../208-r-cran-survival_3.8-3-1_amd64.deb ... 332s Unpacking r-cran-survival (3.8-3-1) ... 332s Selecting previously unselected package r-bioc-multtest. 332s Preparing to unpack .../209-r-bioc-multtest_2.62.0-2_amd64.deb ... 332s Unpacking r-bioc-multtest (2.62.0-2) ... 332s Selecting previously unselected package r-cran-xml. 332s Preparing to unpack .../210-r-cran-xml_3.99-0.18-1_amd64.deb ... 332s Unpacking r-cran-xml (3.99-0.18-1) ... 332s Selecting previously unselected package r-cran-rcurl. 332s Preparing to unpack .../211-r-cran-rcurl_1.98-1.16+dfsg-1_amd64.deb ... 332s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 332s Selecting previously unselected package r-cran-rjson. 332s Preparing to unpack .../212-r-cran-rjson_0.2.23-1_amd64.deb ... 332s Unpacking r-cran-rjson (0.2.23-1) ... 332s Selecting previously unselected package r-cran-yaml. 332s Preparing to unpack .../213-r-cran-yaml_2.3.10-1_amd64.deb ... 332s Unpacking r-cran-yaml (2.3.10-1) ... 332s Selecting previously unselected package r-cran-restfulr. 332s Preparing to unpack .../214-r-cran-restfulr_0.0.15-1_amd64.deb ... 332s Unpacking r-cran-restfulr (0.0.15-1) ... 332s Selecting previously unselected package r-bioc-rtracklayer. 332s Preparing to unpack .../215-r-bioc-rtracklayer_1.66.0-2_amd64.deb ... 332s Unpacking r-bioc-rtracklayer (1.66.0-2) ... 332s Selecting previously unselected package r-cran-digest. 332s Preparing to unpack .../216-r-cran-digest_0.6.37-1_amd64.deb ... 332s Unpacking r-cran-digest (0.6.37-1) ... 332s Selecting previously unselected package r-cran-ape. 332s Preparing to unpack .../217-r-cran-ape_5.8-1-1_amd64.deb ... 332s Unpacking r-cran-ape (5.8-1-1) ... 332s Selecting previously unselected package r-cran-base64enc. 332s Preparing to unpack .../218-r-cran-base64enc_0.1-3-3_amd64.deb ... 332s Unpacking r-cran-base64enc (0.1-3-3) ... 333s Selecting previously unselected package r-cran-brio. 333s Preparing to unpack .../219-r-cran-brio_1.1.5-1_amd64.deb ... 333s Unpacking r-cran-brio (1.1.5-1) ... 333s Selecting previously unselected package r-cran-fastmap. 333s Preparing to unpack .../220-r-cran-fastmap_1.2.0-1_amd64.deb ... 333s Unpacking r-cran-fastmap (1.2.0-1) ... 333s Selecting previously unselected package r-cran-cachem. 333s Preparing to unpack .../221-r-cran-cachem_1.1.0-1_amd64.deb ... 333s Unpacking r-cran-cachem (1.1.0-1) ... 333s Selecting previously unselected package r-cran-htmltools. 333s Preparing to unpack .../222-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 333s Unpacking r-cran-htmltools (0.5.8.1-1) ... 333s Selecting previously unselected package r-cran-jquerylib. 333s Preparing to unpack .../223-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 333s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 333s Selecting previously unselected package r-cran-memoise. 333s Preparing to unpack .../224-r-cran-memoise_2.0.1-1_all.deb ... 333s Unpacking r-cran-memoise (2.0.1-1) ... 333s Selecting previously unselected package r-cran-fs. 333s Preparing to unpack .../225-r-cran-fs_1.6.5+dfsg-1_amd64.deb ... 333s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 333s Selecting previously unselected package r-cran-rappdirs. 333s Preparing to unpack .../226-r-cran-rappdirs_0.3.3-1_amd64.deb ... 333s Unpacking r-cran-rappdirs (0.3.3-1) ... 333s Selecting previously unselected package r-cran-sass. 333s Preparing to unpack .../227-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 333s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 333s Selecting previously unselected package r-cran-bslib. 333s Preparing to unpack .../228-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 333s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 333s Selecting previously unselected package r-cran-ps. 333s Preparing to unpack .../229-r-cran-ps_1.8.1-1_amd64.deb ... 333s Unpacking r-cran-ps (1.8.1-1) ... 333s Selecting previously unselected package r-cran-processx. 333s Preparing to unpack .../230-r-cran-processx_3.8.5-1_amd64.deb ... 333s Unpacking r-cran-processx (3.8.5-1) ... 333s Selecting previously unselected package r-cran-callr. 333s Preparing to unpack .../231-r-cran-callr_3.7.6-1_all.deb ... 333s Unpacking r-cran-callr (3.7.6-1) ... 333s Selecting previously unselected package r-cran-class. 333s Preparing to unpack .../232-r-cran-class_7.3-23-1_amd64.deb ... 333s Unpacking r-cran-class (7.3-23-1) ... 333s Selecting previously unselected package r-cran-proxy. 333s Preparing to unpack .../233-r-cran-proxy_0.4-27-1_amd64.deb ... 333s Unpacking r-cran-proxy (0.4-27-1) ... 333s Selecting previously unselected package r-cran-e1071. 333s Preparing to unpack .../234-r-cran-e1071_1.7-16-1_amd64.deb ... 333s Unpacking r-cran-e1071 (1.7-16-1) ... 333s Selecting previously unselected package r-cran-iterators. 333s Preparing to unpack .../235-r-cran-iterators_1.0.14-1_all.deb ... 333s Unpacking r-cran-iterators (1.0.14-1) ... 333s Selecting previously unselected package r-cran-foreach. 333s Preparing to unpack .../236-r-cran-foreach_1.5.2-1_all.deb ... 333s Unpacking r-cran-foreach (1.5.2-1) ... 333s Selecting previously unselected package r-cran-data.table. 333s Preparing to unpack .../237-r-cran-data.table_1.16.4+dfsg-1_amd64.deb ... 333s Unpacking r-cran-data.table (1.16.4+dfsg-1) ... 333s Selecting previously unselected package r-cran-modelmetrics. 333s Preparing to unpack .../238-r-cran-modelmetrics_1.2.2.2-1build1_amd64.deb ... 333s Unpacking r-cran-modelmetrics (1.2.2.2-1build1) ... 333s Selecting previously unselected package r-cran-plyr. 333s Preparing to unpack .../239-r-cran-plyr_1.8.9-1_amd64.deb ... 333s Unpacking r-cran-plyr (1.8.9-1) ... 334s Selecting previously unselected package r-cran-proc. 334s Preparing to unpack .../240-r-cran-proc_1.18.5-1_amd64.deb ... 334s Unpacking r-cran-proc (1.18.5-1) ... 334s Selecting previously unselected package r-cran-generics. 334s Preparing to unpack .../241-r-cran-generics_0.1.3-1_all.deb ... 334s Unpacking r-cran-generics (0.1.3-1) ... 334s Selecting previously unselected package r-cran-tidyselect. 334s Preparing to unpack .../242-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ... 334s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 334s Selecting previously unselected package r-cran-dplyr. 334s Preparing to unpack .../243-r-cran-dplyr_1.1.4-4_amd64.deb ... 334s Unpacking r-cran-dplyr (1.1.4-4) ... 334s Selecting previously unselected package r-cran-tzdb. 334s Preparing to unpack .../244-r-cran-tzdb_0.4.0-2_amd64.deb ... 334s Unpacking r-cran-tzdb (0.4.0-2) ... 334s Selecting previously unselected package r-cran-clock. 334s Preparing to unpack .../245-r-cran-clock_0.7.1-1_amd64.deb ... 334s Unpacking r-cran-clock (0.7.1-1) ... 334s Selecting previously unselected package r-cran-gower. 334s Preparing to unpack .../246-r-cran-gower_1.0.2-1_amd64.deb ... 334s Unpacking r-cran-gower (1.0.2-1) ... 334s Selecting previously unselected package r-cran-hardhat. 334s Preparing to unpack .../247-r-cran-hardhat_1.4.0+dfsg-1_all.deb ... 334s Unpacking r-cran-hardhat (1.4.0+dfsg-1) ... 334s Selecting previously unselected package r-cran-rpart. 334s Preparing to unpack .../248-r-cran-rpart_4.1.24-1_amd64.deb ... 334s Unpacking r-cran-rpart (4.1.24-1) ... 334s Selecting previously unselected package r-cran-nnet. 334s Preparing to unpack .../249-r-cran-nnet_7.3-20-1_amd64.deb ... 334s Unpacking r-cran-nnet (7.3-20-1) ... 334s Selecting previously unselected package r-cran-shape. 334s Preparing to unpack .../250-r-cran-shape_1.4.6.1-1_all.deb ... 334s Unpacking r-cran-shape (1.4.6.1-1) ... 334s Selecting previously unselected package r-cran-diagram. 334s Preparing to unpack .../251-r-cran-diagram_1.6.5-2_all.deb ... 334s Unpacking r-cran-diagram (1.6.5-2) ... 334s Selecting previously unselected package r-cran-kernsmooth. 334s Preparing to unpack .../252-r-cran-kernsmooth_2.23-26-1_amd64.deb ... 334s Unpacking r-cran-kernsmooth (2.23-26-1) ... 334s Selecting previously unselected package r-cran-globals. 334s Preparing to unpack .../253-r-cran-globals_0.16.3-1_all.deb ... 334s Unpacking r-cran-globals (0.16.3-1) ... 334s Selecting previously unselected package r-cran-listenv. 334s Preparing to unpack .../254-r-cran-listenv_0.9.1+dfsg-1_all.deb ... 334s Unpacking r-cran-listenv (0.9.1+dfsg-1) ... 334s Selecting previously unselected package r-cran-parallelly. 334s Preparing to unpack .../255-r-cran-parallelly_1.42.0-1_amd64.deb ... 334s Unpacking r-cran-parallelly (1.42.0-1) ... 334s Selecting previously unselected package r-cran-future. 334s Preparing to unpack .../256-r-cran-future_1.34.0+dfsg-1_all.deb ... 334s Unpacking r-cran-future (1.34.0+dfsg-1) ... 334s Selecting previously unselected package r-cran-future.apply. 334s Preparing to unpack .../257-r-cran-future.apply_1.11.3+dfsg-1_all.deb ... 334s Unpacking r-cran-future.apply (1.11.3+dfsg-1) ... 334s Selecting previously unselected package r-cran-numderiv. 334s Preparing to unpack .../258-r-cran-numderiv_2016.8-1.1-3_all.deb ... 334s Unpacking r-cran-numderiv (2016.8-1.1-3) ... 334s Selecting previously unselected package r-cran-progressr. 334s Preparing to unpack .../259-r-cran-progressr_0.15.1-1_all.deb ... 334s Unpacking r-cran-progressr (0.15.1-1) ... 335s Selecting previously unselected package r-cran-squarem. 335s Preparing to unpack .../260-r-cran-squarem_2021.1-1_all.deb ... 335s Unpacking r-cran-squarem (2021.1-1) ... 335s Selecting previously unselected package r-cran-lava. 335s Preparing to unpack .../261-r-cran-lava_1.8.1+dfsg-1_all.deb ... 335s Unpacking r-cran-lava (1.8.1+dfsg-1) ... 335s Selecting previously unselected package r-cran-prodlim. 335s Preparing to unpack .../262-r-cran-prodlim_2024.06.25-1_amd64.deb ... 335s Unpacking r-cran-prodlim (2024.06.25-1) ... 335s Selecting previously unselected package r-cran-ipred. 335s Preparing to unpack .../263-r-cran-ipred_0.9-15-1_amd64.deb ... 335s Unpacking r-cran-ipred (0.9-15-1) ... 335s Selecting previously unselected package r-cran-timechange. 335s Preparing to unpack .../264-r-cran-timechange_0.3.0-1_amd64.deb ... 335s Unpacking r-cran-timechange (0.3.0-1) ... 335s Selecting previously unselected package r-cran-lubridate. 335s Preparing to unpack .../265-r-cran-lubridate_1.9.4+dfsg-1_amd64.deb ... 335s Unpacking r-cran-lubridate (1.9.4+dfsg-1) ... 335s Selecting previously unselected package r-cran-purrr. 335s Preparing to unpack .../266-r-cran-purrr_1.0.2-1_amd64.deb ... 335s Unpacking r-cran-purrr (1.0.2-1) ... 335s Selecting previously unselected package r-cran-stringi. 335s Preparing to unpack .../267-r-cran-stringi_1.8.4-1build1_amd64.deb ... 335s Unpacking r-cran-stringi (1.8.4-1build1) ... 335s Selecting previously unselected package r-cran-stringr. 335s Preparing to unpack .../268-r-cran-stringr_1.5.1-1_all.deb ... 335s Unpacking r-cran-stringr (1.5.1-1) ... 335s Selecting previously unselected package r-cran-tidyr. 335s Preparing to unpack .../269-r-cran-tidyr_1.3.1-1_amd64.deb ... 335s Unpacking r-cran-tidyr (1.3.1-1) ... 335s Selecting previously unselected package r-cran-timedate. 335s Preparing to unpack .../270-r-cran-timedate_4041.110-1_amd64.deb ... 335s Unpacking r-cran-timedate (4041.110-1) ... 335s Selecting previously unselected package r-cran-recipes. 335s Preparing to unpack .../271-r-cran-recipes_1.1.0+dfsg-1_all.deb ... 335s Unpacking r-cran-recipes (1.1.0+dfsg-1) ... 335s Selecting previously unselected package r-cran-reshape2. 335s Preparing to unpack .../272-r-cran-reshape2_1.4.4-2build1_amd64.deb ... 335s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 335s Selecting previously unselected package r-cran-caret. 335s Preparing to unpack .../273-r-cran-caret_7.0-1+dfsg-1_amd64.deb ... 335s Unpacking r-cran-caret (7.0-1+dfsg-1) ... 335s Selecting previously unselected package r-cran-catools. 335s Preparing to unpack .../274-r-cran-catools_1.18.2-1_amd64.deb ... 335s Unpacking r-cran-catools (1.18.2-1) ... 335s Selecting previously unselected package r-cran-cluster. 335s Preparing to unpack .../275-r-cran-cluster_2.1.8-1_amd64.deb ... 335s Unpacking r-cran-cluster (2.1.8-1) ... 335s Selecting previously unselected package r-cran-evaluate. 335s Preparing to unpack .../276-r-cran-evaluate_1.0.3-1_all.deb ... 335s Unpacking r-cran-evaluate (1.0.3-1) ... 335s Selecting previously unselected package r-cran-xfun. 335s Preparing to unpack .../277-r-cran-xfun_0.50+dfsg-1_amd64.deb ... 335s Unpacking r-cran-xfun (0.50+dfsg-1) ... 335s Selecting previously unselected package r-cran-highr. 336s Preparing to unpack .../278-r-cran-highr_0.11+dfsg-1_all.deb ... 336s Unpacking r-cran-highr (0.11+dfsg-1) ... 336s Selecting previously unselected package libjs-mathjax. 336s Preparing to unpack .../279-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 336s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 336s Selecting previously unselected package r-cran-knitr. 336s Preparing to unpack .../280-r-cran-knitr_1.49+dfsg-1_all.deb ... 336s Unpacking r-cran-knitr (1.49+dfsg-1) ... 336s Selecting previously unselected package r-cran-fontawesome. 336s Preparing to unpack .../281-r-cran-fontawesome_0.5.3-1_all.deb ... 336s Unpacking r-cran-fontawesome (0.5.3-1) ... 337s Selecting previously unselected package r-cran-tinytex. 337s Preparing to unpack .../282-r-cran-tinytex_0.54-1_all.deb ... 337s Unpacking r-cran-tinytex (0.54-1) ... 337s Selecting previously unselected package libjs-modernizr. 337s Preparing to unpack .../283-libjs-modernizr_3.13.0-0.1_all.deb ... 337s Unpacking libjs-modernizr (3.13.0-0.1) ... 337s Selecting previously unselected package r-cran-later. 337s Preparing to unpack .../284-r-cran-later_1.4.1+dfsg-1_amd64.deb ... 337s Unpacking r-cran-later (1.4.1+dfsg-1) ... 337s Selecting previously unselected package r-cran-promises. 337s Preparing to unpack .../285-r-cran-promises_1.3.2+dfsg-1_amd64.deb ... 337s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 337s Selecting previously unselected package r-cran-httpuv. 337s Preparing to unpack .../286-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 337s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 337s Selecting previously unselected package r-cran-xtable. 337s Preparing to unpack .../287-r-cran-xtable_1%3a1.8-4-2_all.deb ... 337s Unpacking r-cran-xtable (1:1.8-4-2) ... 337s Selecting previously unselected package r-cran-sourcetools. 337s Preparing to unpack .../288-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 337s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 337s Selecting previously unselected package r-cran-commonmark. 337s Preparing to unpack .../289-r-cran-commonmark_1.9.2-2_amd64.deb ... 337s Unpacking r-cran-commonmark (1.9.2-2) ... 337s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 337s Preparing to unpack .../290-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 337s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 337s Selecting previously unselected package r-cran-shiny. 337s Preparing to unpack .../291-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 337s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 337s Selecting previously unselected package r-cran-rmarkdown. 337s Preparing to unpack .../292-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 337s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 337s Selecting previously unselected package r-cran-htmlwidgets. 337s Preparing to unpack .../293-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 337s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 337s Selecting previously unselected package r-cran-miniui. 337s Preparing to unpack .../294-r-cran-miniui_0.1.1.1-3build1_all.deb ... 337s Unpacking r-cran-miniui (0.1.1.1-3build1) ... 337s Selecting previously unselected package r-cran-shinyjs. 337s Preparing to unpack .../295-r-cran-shinyjs_2.1.0-1_all.deb ... 337s Unpacking r-cran-shinyjs (2.1.0-1) ... 337s Selecting previously unselected package r-cran-colourpicker. 337s Preparing to unpack .../296-r-cran-colourpicker_1.3.0+dfsg-1_all.deb ... 337s Unpacking r-cran-colourpicker (1.3.0+dfsg-1) ... 337s Selecting previously unselected package r-cran-conquer. 337s Preparing to unpack .../297-r-cran-conquer_1.3.3-1_amd64.deb ... 337s Unpacking r-cran-conquer (1.3.3-1) ... 337s Selecting previously unselected package r-cran-cowplot. 337s Preparing to unpack .../298-r-cran-cowplot_1.1.3+dfsg-1_all.deb ... 337s Unpacking r-cran-cowplot (1.1.3+dfsg-1) ... 337s Selecting previously unselected package r-cran-lazyeval. 337s Preparing to unpack .../299-r-cran-lazyeval_0.2.2-1build1_amd64.deb ... 337s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 337s Selecting previously unselected package r-cran-crosstalk. 337s Preparing to unpack .../300-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 337s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 337s Selecting previously unselected package r-cran-deldir. 337s Preparing to unpack .../301-r-cran-deldir_2.0-4-1build1_amd64.deb ... 337s Unpacking r-cran-deldir (2.0-4-1build1) ... 337s Selecting previously unselected package r-cran-deoptimr. 338s Preparing to unpack .../302-r-cran-deoptimr_1.1-3-1-1_all.deb ... 338s Unpacking r-cran-deoptimr (1.1-3-1-1) ... 338s Selecting previously unselected package r-cran-desc. 338s Preparing to unpack .../303-r-cran-desc_1.4.3-1_all.deb ... 338s Unpacking r-cran-desc (1.4.3-1) ... 338s Selecting previously unselected package r-cran-diffobj. 338s Preparing to unpack .../304-r-cran-diffobj_0.3.5-1_amd64.deb ... 338s Unpacking r-cran-diffobj (0.3.5-1) ... 338s Selecting previously unselected package r-cran-dotcall64. 338s Preparing to unpack .../305-r-cran-dotcall64_1.2-1_amd64.deb ... 338s Unpacking r-cran-dotcall64 (1.2-1) ... 338s Selecting previously unselected package r-cran-sitmo. 338s Preparing to unpack .../306-r-cran-sitmo_2.0.2-1_amd64.deb ... 338s Unpacking r-cran-sitmo (2.0.2-1) ... 338s Selecting previously unselected package r-cran-dqrng. 338s Preparing to unpack .../307-r-cran-dqrng_0.3.2+dfsg-1_amd64.deb ... 338s Unpacking r-cran-dqrng (0.3.2+dfsg-1) ... 338s Selecting previously unselected package r-cran-fastdummies. 338s Preparing to unpack .../308-r-cran-fastdummies_1.7.5-1_all.deb ... 338s Unpacking r-cran-fastdummies (1.7.5-1) ... 338s Selecting previously unselected package r-cran-fitdistrplus. 338s Preparing to unpack .../309-r-cran-fitdistrplus_1.2-2-1_all.deb ... 338s Unpacking r-cran-fitdistrplus (1.2-2-1) ... 338s Selecting previously unselected package r-cran-fnn. 338s Preparing to unpack .../310-r-cran-fnn_1.1.4.1-1_amd64.deb ... 338s Unpacking r-cran-fnn (1.1.4.1-1) ... 338s Selecting previously unselected package r-cran-gtools. 338s Preparing to unpack .../311-r-cran-gtools_3.9.5-1_amd64.deb ... 338s Unpacking r-cran-gtools (3.9.5-1) ... 338s Selecting previously unselected package r-cran-gdata. 338s Preparing to unpack .../312-r-cran-gdata_3.0.1-1_all.deb ... 338s Unpacking r-cran-gdata (3.0.1-1) ... 338s Selecting previously unselected package r-cran-ggrepel. 338s Preparing to unpack .../313-r-cran-ggrepel_0.9.6-1_amd64.deb ... 338s Unpacking r-cran-ggrepel (0.9.6-1) ... 338s Selecting previously unselected package r-cran-ggridges. 338s Preparing to unpack .../314-r-cran-ggridges_0.5.6-1_all.deb ... 338s Unpacking r-cran-ggridges (0.5.6-1) ... 338s Selecting previously unselected package r-cran-goftest. 338s Preparing to unpack .../315-r-cran-goftest_1.2-3-1_amd64.deb ... 338s Unpacking r-cran-goftest (1.2-3-1) ... 338s Selecting previously unselected package r-cran-gplots. 338s Preparing to unpack .../316-r-cran-gplots_3.2.0-1_all.deb ... 338s Unpacking r-cran-gplots (3.2.0-1) ... 338s Selecting previously unselected package r-cran-gridextra. 338s Preparing to unpack .../317-r-cran-gridextra_2.3-3build1_all.deb ... 338s Unpacking r-cran-gridextra (2.3-3build1) ... 338s Selecting previously unselected package r-cran-rprojroot. 338s Preparing to unpack .../318-r-cran-rprojroot_2.0.4-2_all.deb ... 338s Unpacking r-cran-rprojroot (2.0.4-2) ... 338s Selecting previously unselected package r-cran-here. 338s Preparing to unpack .../319-r-cran-here_1.0.1-2_all.deb ... 338s Unpacking r-cran-here (1.0.1-2) ... 338s Selecting previously unselected package r-cran-ica. 338s Preparing to unpack .../320-r-cran-ica_1.0-3-1_all.deb ... 338s Unpacking r-cran-ica (1.0-3-1) ... 338s Selecting previously unselected package r-cran-igraph. 338s Preparing to unpack .../321-r-cran-igraph_2.1.4-1_amd64.deb ... 338s Unpacking r-cran-igraph (2.1.4-1) ... 339s Selecting previously unselected package r-cran-irlba. 339s Preparing to unpack .../322-r-cran-irlba_2.3.5.1-4_amd64.deb ... 339s Unpacking r-cran-irlba (2.3.5.1-4) ... 339s Selecting previously unselected package r-cran-kernlab. 339s Preparing to unpack .../323-r-cran-kernlab_0.9-33-1_amd64.deb ... 339s Unpacking r-cran-kernlab (0.9-33-1) ... 339s Selecting previously unselected package r-cran-rcpptoml. 339s Preparing to unpack .../324-r-cran-rcpptoml_0.2.2+dfsg-1_amd64.deb ... 339s Unpacking r-cran-rcpptoml (0.2.2+dfsg-1) ... 339s Selecting previously unselected package r-cran-png. 339s Preparing to unpack .../325-r-cran-png_0.1-8-1build2_amd64.deb ... 339s Unpacking r-cran-png (0.1-8-1build2) ... 339s Selecting previously unselected package r-cran-reticulate. 339s Preparing to unpack .../326-r-cran-reticulate_1.39.0+dfsg-1_amd64.deb ... 339s Unpacking r-cran-reticulate (1.39.0+dfsg-1) ... 339s Selecting previously unselected package r-cran-leiden. 339s Preparing to unpack .../327-r-cran-leiden_0.4.3.1+dfsg-1_all.deb ... 339s Unpacking r-cran-leiden (0.4.3.1+dfsg-1) ... 339s Selecting previously unselected package r-cran-zoo. 339s Preparing to unpack .../328-r-cran-zoo_1.8-12-2_amd64.deb ... 339s Unpacking r-cran-zoo (1.8-12-2) ... 339s Selecting previously unselected package r-cran-lmtest. 339s Preparing to unpack .../329-r-cran-lmtest_0.9.40-1_amd64.deb ... 339s Unpacking r-cran-lmtest (0.9.40-1) ... 339s Selecting previously unselected package r-cran-mathjaxr. 339s Preparing to unpack .../330-r-cran-mathjaxr_1.6-0-1_all.deb ... 339s Unpacking r-cran-mathjaxr (1.6-0-1) ... 339s Selecting previously unselected package r-cran-matrixmodels. 339s Preparing to unpack .../331-r-cran-matrixmodels_0.5-3-1_all.deb ... 339s Unpacking r-cran-matrixmodels (0.5-3-1) ... 339s Selecting previously unselected package r-cran-rbibutils. 339s Preparing to unpack .../332-r-cran-rbibutils_2.3-1_amd64.deb ... 339s Unpacking r-cran-rbibutils (2.3-1) ... 339s Selecting previously unselected package r-cran-rdpack. 339s Preparing to unpack .../333-r-cran-rdpack_2.6.2-1_all.deb ... 339s Unpacking r-cran-rdpack (2.6.2-1) ... 339s Selecting previously unselected package r-cran-mnormt. 339s Preparing to unpack .../334-r-cran-mnormt_2.1.1-2_amd64.deb ... 339s Unpacking r-cran-mnormt (2.1.1-2) ... 339s Selecting previously unselected package r-cran-sparsem. 339s Preparing to unpack .../335-r-cran-sparsem_1.84-2-1_amd64.deb ... 339s Unpacking r-cran-sparsem (1.84-2-1) ... 339s Selecting previously unselected package r-cran-quantreg. 339s Preparing to unpack .../336-r-cran-quantreg_6.00-1_amd64.deb ... 339s Unpacking r-cran-quantreg (6.00-1) ... 339s Selecting previously unselected package r-cran-sn. 339s Preparing to unpack .../337-r-cran-sn_2.1.1-2_all.deb ... 339s Unpacking r-cran-sn (2.1.1-2) ... 339s Selecting previously unselected package r-cran-mvtnorm. 339s Preparing to unpack .../338-r-cran-mvtnorm_1.3-3-1_amd64.deb ... 339s Unpacking r-cran-mvtnorm (1.3-3-1) ... 339s Selecting previously unselected package r-cran-tfisher. 339s Preparing to unpack .../339-r-cran-tfisher_0.2.0-3_all.deb ... 339s Unpacking r-cran-tfisher (0.2.0-3) ... 339s Selecting previously unselected package r-cran-plotrix. 339s Preparing to unpack .../340-r-cran-plotrix_3.8-4-1_all.deb ... 339s Unpacking r-cran-plotrix (3.8-4-1) ... 339s Selecting previously unselected package r-cran-th.data. 339s Preparing to unpack .../341-r-cran-th.data_1.1-3-1_all.deb ... 339s Unpacking r-cran-th.data (1.1-3-1) ... 340s Selecting previously unselected package r-cran-sandwich. 340s Preparing to unpack .../342-r-cran-sandwich_3.1-1-1_all.deb ... 340s Unpacking r-cran-sandwich (3.1-1-1) ... 340s Selecting previously unselected package r-cran-multcomp. 340s Preparing to unpack .../343-r-cran-multcomp_1.4-28-1_all.deb ... 340s Unpacking r-cran-multcomp (1.4-28-1) ... 340s Selecting previously unselected package r-cran-mutoss. 340s Preparing to unpack .../344-r-cran-mutoss_0.1-13-1_all.deb ... 340s Unpacking r-cran-mutoss (0.1-13-1) ... 340s Selecting previously unselected package r-cran-robustbase. 340s Preparing to unpack .../345-r-cran-robustbase_0.99-4-1-1_amd64.deb ... 340s Unpacking r-cran-robustbase (0.99-4-1-1) ... 340s Selecting previously unselected package r-cran-qqconf. 340s Preparing to unpack .../346-r-cran-qqconf_1.3.2+dfsg-1_amd64.deb ... 340s Unpacking r-cran-qqconf (1.3.2+dfsg-1) ... 340s Selecting previously unselected package r-cran-metap. 340s Preparing to unpack .../347-r-cran-metap_1.11-2_all.deb ... 340s Unpacking r-cran-metap (1.11-2) ... 340s Selecting previously unselected package r-cran-plotly. 340s Preparing to unpack .../348-r-cran-plotly_4.10.4+dfsg-2_all.deb ... 340s Unpacking r-cran-plotly (4.10.4+dfsg-2) ... 340s Selecting previously unselected package r-cran-segmented. 340s Preparing to unpack .../349-r-cran-segmented_2.1-3-1_all.deb ... 340s Unpacking r-cran-segmented (2.1-3-1) ... 340s Selecting previously unselected package r-cran-mixtools. 340s Preparing to unpack .../350-r-cran-mixtools_2.0.0-1_amd64.deb ... 340s Unpacking r-cran-mixtools (2.0.0-1) ... 340s Selecting previously unselected package r-cran-patchwork. 340s Preparing to unpack .../351-r-cran-patchwork_1.3.0-1_all.deb ... 340s Unpacking r-cran-patchwork (1.3.0-1) ... 340s Selecting previously unselected package r-cran-pbapply. 340s Preparing to unpack .../352-r-cran-pbapply_1.7-2-1_all.deb ... 340s Unpacking r-cran-pbapply (1.7-2-1) ... 340s Selecting previously unselected package r-cran-pkgbuild. 340s Preparing to unpack .../353-r-cran-pkgbuild_1.4.6-1_all.deb ... 340s Unpacking r-cran-pkgbuild (1.4.6-1) ... 340s Selecting previously unselected package r-cran-pkgload. 340s Preparing to unpack .../354-r-cran-pkgload_1.4.0-1_all.deb ... 340s Unpacking r-cran-pkgload (1.4.0-1) ... 340s Selecting previously unselected package r-cran-polyclip. 340s Preparing to unpack .../355-r-cran-polyclip_1.10-7-1_amd64.deb ... 340s Unpacking r-cran-polyclip (1.10-7-1) ... 340s Selecting previously unselected package r-cran-praise. 340s Preparing to unpack .../356-r-cran-praise_1.0.0-4build1_all.deb ... 340s Unpacking r-cran-praise (1.0.0-4build1) ... 340s Selecting previously unselected package r-cran-r.methodss3. 340s Preparing to unpack .../357-r-cran-r.methodss3_1.8.2-1_all.deb ... 340s Unpacking r-cran-r.methodss3 (1.8.2-1) ... 340s Selecting previously unselected package r-cran-r.oo. 340s Preparing to unpack .../358-r-cran-r.oo_1.27.0-1_all.deb ... 340s Unpacking r-cran-r.oo (1.27.0-1) ... 340s Selecting previously unselected package r-cran-r.utils. 340s Preparing to unpack .../359-r-cran-r.utils_2.12.3-1_all.deb ... 340s Unpacking r-cran-r.utils (2.12.3-1) ... 341s Selecting previously unselected package r-cran-rann. 341s Preparing to unpack .../360-r-cran-rann_2.6.2-1_amd64.deb ... 341s Unpacking r-cran-rann (2.6.2-1) ... 341s Selecting previously unselected package r-cran-rcppannoy. 341s Preparing to unpack .../361-r-cran-rcppannoy_0.0.22-1_amd64.deb ... 341s Unpacking r-cran-rcppannoy (0.0.22-1) ... 341s Selecting previously unselected package r-cran-rcppeigen. 341s Preparing to unpack .../362-r-cran-rcppeigen_0.3.4.0.2-1_amd64.deb ... 341s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 341s Selecting previously unselected package r-cran-rcpphnsw. 341s Preparing to unpack .../363-r-cran-rcpphnsw_0.6.0+ds-1_amd64.deb ... 341s Unpacking r-cran-rcpphnsw (0.6.0+ds-1) ... 341s Selecting previously unselected package r-cran-rcppprogress. 341s Preparing to unpack .../364-r-cran-rcppprogress_0.4.2-2build1_all.deb ... 341s Unpacking r-cran-rcppprogress (0.4.2-2build1) ... 341s Selecting previously unselected package r-cran-rocr. 341s Preparing to unpack .../365-r-cran-rocr_1.0-11-3_all.deb ... 341s Unpacking r-cran-rocr (1.0-11-3) ... 341s Selecting previously unselected package r-cran-rspectra. 341s Preparing to unpack .../366-r-cran-rspectra_0.16-2-1_amd64.deb ... 341s Unpacking 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up r-bioc-biostrings (2.74.1+dfsg-2) ... 345s Setting up r-cran-caret (7.0-1+dfsg-1) ... 345s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 345s Setting up r-cran-shinyjs (2.1.0-1) ... 345s Setting up r-cran-miniui (0.1.1.1-3build1) ... 345s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 345s Setting up r-cran-conquer (1.3.3-1) ... 345s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... 345s Setting up r-cran-crosstalk (1.2.1+dfsg-1) ... 345s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 345s Setting up r-cran-quantreg (6.00-1) ... 345s Setting up r-cran-sn (2.1.1-2) ... 345s Setting up r-bioc-deseq2 (1.46.0+dfsg-2) ... 345s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 345s Setting up r-cran-colourpicker (1.3.0+dfsg-1) ... 345s Setting up r-cran-tfisher (0.2.0-3) ... 345s Setting up r-bioc-genomicalignments (1.42.0-2) ... 345s Setting up r-cran-metap (1.11-2) ... 345s Setting up r-bioc-rtracklayer (1.66.0-2) ... 345s Setting up r-cran-plotly (4.10.4+dfsg-2) ... 345s Setting up r-cran-mixtools (2.0.0-1) ... 345s Setting up r-cran-seurat (5.0.1-1) ... 345s Processing triggers for man-db (2.13.0-1) ... 346s Processing triggers for install-info (7.1.1-1) ... 346s Processing triggers for libc-bin (2.41-1ubuntu1) ... 349s autopkgtest [22:37:33]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 349s autopkgtest [22:37:33]: test pkg-r-autopkgtest: [----------------------- 349s Test: Try to load the R library Seurat 349s 349s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 349s Copyright (C) 2024 The R Foundation for Statistical Computing 349s Platform: x86_64-pc-linux-gnu 349s 349s R is free software and comes with ABSOLUTELY NO WARRANTY. 349s You are welcome to redistribute it under certain conditions. 349s Type 'license()' or 'licence()' for distribution details. 349s 349s R is a collaborative project with many contributors. 349s Type 'contributors()' for more information and 349s 'citation()' on how to cite R or R packages in publications. 349s 349s Type 'demo()' for some demos, 'help()' for on-line help, or 349s 'help.start()' for an HTML browser interface to help. 349s Type 'q()' to quit R. 349s 350s > library('Seurat') 350s Loading required package: SeuratObject 350s Loading required package: sp 351s ‘SeuratObject’ was built under R 4.4.1 but the current version is 351s 4.4.2; it is recomended that you reinstall ‘SeuratObject’ as the ABI 351s for R may have changed 351s ‘SeuratObject’ was built with package ‘Matrix’ 1.7.0 but the current 351s version is 1.7.2; it is recomended that you reinstall ‘SeuratObject’ as 351s the ABI for ‘Matrix’ may have changed 351s 351s Attaching package: ‘SeuratObject’ 351s 351s The following objects are masked from ‘package:base’: 351s 351s intersect, t 351s 353s > 353s > 353s Other tests are currently unsupported! 353s They will be progressively added. 353s autopkgtest [22:37:37]: test pkg-r-autopkgtest: -----------------------] 354s pkg-r-autopkgtest PASS 354s autopkgtest [22:37:38]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 354s autopkgtest [22:37:38]: @@@@@@@@@@@@@@@@@@@@ summary 354s run-unit-test PASS 354s pkg-r-autopkgtest PASS 373s nova [W] Skipping flock for amd64 373s Creating nova instance adt-plucky-amd64-r-cran-seurat-20250215-223144-juju-7f2275-prod-proposed-migration-environment-15-220a5f6c-a67f-4bd1-863d-b8d0d69d27ce from image adt/ubuntu-plucky-amd64-server-20250215.img (UUID d1f7bb98-7df8-4026-816e-9f6798166d8b)... 373s nova [W] Timed out waiting for 89658bf6-5087-41fa-8242-6de70f106b6c to get deleted. 373s nova [W] Skipping flock for amd64 373s Creating nova instance adt-plucky-amd64-r-cran-seurat-20250215-223144-juju-7f2275-prod-proposed-migration-environment-15-220a5f6c-a67f-4bd1-863d-b8d0d69d27ce from image adt/ubuntu-plucky-amd64-server-20250215.img (UUID d1f7bb98-7df8-4026-816e-9f6798166d8b)... 373s nova [W] Timed out waiting for d9cc5924-ef1b-417c-b82a-48968cf10a3c to get deleted.