0s autopkgtest [19:24:48]: starting date and time: 2025-02-03 19:24:48+0000 0s autopkgtest [19:24:48]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [19:24:48]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.yu6zcg0x/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-testthat --apt-upgrade r-cran-seurat --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-testthat/3.2.3-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@lcy02-5.secgroup --name adt-plucky-amd64-r-cran-seurat-20250203-192448-juju-7f2275-prod-proposed-migration-environment-20-c4db2358-357b-4764-8226-71d60a31cf04 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 51s autopkgtest [19:25:39]: testbed dpkg architecture: amd64 51s autopkgtest [19:25:39]: testbed apt version: 2.9.18 51s autopkgtest [19:25:39]: @@@@@@@@@@@@@@@@@@@@ test bed setup 51s autopkgtest [19:25:39]: testbed release detected to be: None 52s autopkgtest [19:25:40]: updating testbed package index (apt update) 52s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [110 kB] 52s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 52s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 52s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 52s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB] 52s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [884 kB] 52s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.4 kB] 52s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [95.5 kB] 52s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [125 kB] 52s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [832 kB] 52s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [299 kB] 52s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [7208 B] 52s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [1328 B] 52s Fetched 2446 kB in 0s (5910 kB/s) 53s Reading package lists... 53s Reading package lists... 54s Building dependency tree... 54s Reading state information... 54s Calculating upgrade... 54s The following packages will be upgraded: 54s initramfs-tools initramfs-tools-bin initramfs-tools-core 54s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 54s Need to get 84.0 kB of archives. 54s After this operation, 9216 B of additional disk space will be used. 54s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools all 0.145ubuntu1 [7942 B] 54s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-core all 0.145ubuntu1 [51.2 kB] 54s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-bin amd64 0.145ubuntu1 [24.8 kB] 55s Fetched 84.0 kB in 0s (4052 kB/s) 55s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108876 files and directories currently installed.) 55s Preparing to unpack .../initramfs-tools_0.145ubuntu1_all.deb ... 55s Unpacking initramfs-tools (0.145ubuntu1) over (0.142ubuntu35) ... 55s Preparing to unpack .../initramfs-tools-core_0.145ubuntu1_all.deb ... 55s Unpacking initramfs-tools-core (0.145ubuntu1) over (0.142ubuntu35) ... 55s Preparing to unpack .../initramfs-tools-bin_0.145ubuntu1_amd64.deb ... 55s Unpacking initramfs-tools-bin (0.145ubuntu1) over (0.142ubuntu35) ... 55s Setting up initramfs-tools-bin (0.145ubuntu1) ... 55s Setting up initramfs-tools-core (0.145ubuntu1) ... 55s Setting up initramfs-tools (0.145ubuntu1) ... 55s update-initramfs: deferring update (trigger activated) 55s Processing triggers for man-db (2.13.0-1) ... 56s Processing triggers for initramfs-tools (0.145ubuntu1) ... 56s update-initramfs: Generating /boot/initrd.img-6.12.0-12-generic 56s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 67s Reading package lists... 67s Building dependency tree... 67s Reading state information... 68s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 68s autopkgtest [19:25:56]: upgrading testbed (apt dist-upgrade and autopurge) 68s Reading package lists... 69s Building dependency tree... 69s Reading state information... 69s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 69s Starting 2 pkgProblemResolver with broken count: 0 69s Done 70s Entering ResolveByKeep 70s 71s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 71s Reading package lists... 71s Building dependency tree... 71s Reading state information... 71s Starting pkgProblemResolver with broken count: 0 71s Starting 2 pkgProblemResolver with broken count: 0 71s Done 72s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 72s autopkgtest [19:26:00]: rebooting testbed after setup commands that affected boot 76s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 87s autopkgtest [19:26:15]: testbed running kernel: Linux 6.12.0-12-generic #12-Ubuntu SMP PREEMPT_DYNAMIC Wed Jan 22 16:36:37 UTC 2025 88s autopkgtest [19:26:16]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-seurat 89s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-seurat 5.0.1-1 (dsc) [3385 B] 89s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-seurat 5.0.1-1 (tar) [2226 kB] 89s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-seurat 5.0.1-1 (diff) [4668 B] 89s gpgv: Signature made Fri Nov 24 16:12:03 2023 UTC 89s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 89s gpgv: issuer "tille@debian.org" 89s gpgv: Can't check signature: No public key 89s dpkg-source: warning: cannot verify inline signature for ./r-cran-seurat_5.0.1-1.dsc: no acceptable signature found 89s autopkgtest [19:26:17]: testing package r-cran-seurat version 5.0.1-1 89s autopkgtest [19:26:17]: build not needed 90s autopkgtest [19:26:18]: test run-unit-test: preparing testbed 90s Reading package lists... 91s Building dependency tree... 91s Reading state information... 91s Starting pkgProblemResolver with broken count: 0 91s Starting 2 pkgProblemResolver with broken count: 0 91s Done 92s The following NEW packages will be installed: 92s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 92s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax 92s javascript-common libaec0 libamd3 libasan8 libblas3 libboost-dev 92s libboost1.83-dev libcairo2 libcolamd3 libdatrie1 libdeflate0 92s libfftw3-double3 libfontconfig1 libgcc-14-dev libgfortran5 libglpk40 92s libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-310 libhdf5-hl-310 libhwasan0 92s libice6 libitm1 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap 92s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 92s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 92s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 92s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack3 92s liblerc4 liblsan0 libltdl7 liblua5.4-0 libpango-1.0-0 libpangocairo-1.0-0 92s libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 libquadmath0 92s libsharpyuv0 libsm6 libstdc++-14-dev libsuitesparseconfig7 libsz2 libtcl8.6 92s libthai-data libthai0 libtiff6 libtk8.6 libtsan2 libubsan1 libwebp7 92s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 littler 92s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 92s r-base-core r-bioc-biobase r-bioc-biocgenerics r-bioc-biocio 92s r-bioc-biocparallel r-bioc-biocviews r-bioc-biostrings r-bioc-delayedarray 92s r-bioc-deseq2 r-bioc-genomeinfodb r-bioc-genomeinfodbdata 92s r-bioc-genomicalignments r-bioc-genomicranges r-bioc-graph 92s r-bioc-hsmmsinglecell r-bioc-iranges r-bioc-limma r-bioc-matrixgenerics 92s r-bioc-monocle r-bioc-multtest r-bioc-rbgl r-bioc-rhtslib r-bioc-rsamtools 92s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors 92s r-bioc-singlecellexperiment r-bioc-sparsearray r-bioc-summarizedexperiment 92s r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-ape 92s r-cran-askpass r-cran-base64enc r-cran-beeswarm r-cran-bh r-cran-biocmanager 92s r-cran-bit r-cran-bit64 r-cran-bitops r-cran-brio r-cran-bslib r-cran-cachem 92s r-cran-cairo r-cran-callr r-cran-caret r-cran-catools r-cran-class 92s r-cran-cli r-cran-clock r-cran-cluster r-cran-codetools r-cran-colorspace 92s r-cran-colourpicker r-cran-combinat r-cran-commonmark r-cran-conquer 92s r-cran-cowplot r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl 92s r-cran-data.table r-cran-ddrtree r-cran-deldir r-cran-deoptimr r-cran-desc 92s r-cran-diagram r-cran-diffobj r-cran-digest r-cran-dotcall64 r-cran-dplyr 92s r-cran-dqrng r-cran-e1071 r-cran-evaluate r-cran-fansi r-cran-farver 92s r-cran-fastdummies r-cran-fastica r-cran-fastmap r-cran-fitdistrplus 92s r-cran-fnn r-cran-fontawesome r-cran-foreach r-cran-formatr r-cran-fs 92s r-cran-futile.logger r-cran-futile.options r-cran-future r-cran-future.apply 92s r-cran-gdata r-cran-generics r-cran-ggbeeswarm r-cran-ggplot2 r-cran-ggrastr 92s r-cran-ggrepel r-cran-ggridges r-cran-globals r-cran-glue r-cran-goftest 92s r-cran-gower r-cran-gplots r-cran-gridextra r-cran-gtable r-cran-gtools 92s r-cran-hardhat r-cran-hdf5r r-cran-here r-cran-highr r-cran-htmltools 92s r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-ica r-cran-igraph 92s r-cran-ipred r-cran-irlba r-cran-isoband r-cran-iterators r-cran-jquerylib 92s r-cran-jsonlite r-cran-kernlab r-cran-kernsmooth r-cran-knitr 92s r-cran-labeling r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lava 92s r-cran-lazyeval r-cran-leiden r-cran-leidenbase r-cran-lifecycle 92s r-cran-listenv r-cran-littler r-cran-lmtest r-cran-locfit r-cran-lubridate 92s r-cran-magrittr r-cran-mass r-cran-mathjaxr r-cran-matrix 92s r-cran-matrixmodels r-cran-matrixstats r-cran-memoise r-cran-metap 92s r-cran-mgcv r-cran-mime r-cran-miniui r-cran-mixtools r-cran-mnormt 92s r-cran-modelmetrics r-cran-multcomp r-cran-munsell r-cran-mutoss 92s r-cran-mvtnorm r-cran-nlme r-cran-nnet r-cran-numderiv r-cran-openssl 92s r-cran-parallelly r-cran-patchwork r-cran-pbapply r-cran-pheatmap 92s r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 92s r-cran-pkgload r-cran-plotly r-cran-plotrix r-cran-plyr r-cran-png 92s r-cran-polyclip r-cran-praise r-cran-proc r-cran-processx r-cran-prodlim 92s r-cran-progressr r-cran-promises r-cran-proxy r-cran-ps r-cran-purrr 92s r-cran-qqconf r-cran-quantreg r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils 92s r-cran-r6 r-cran-ragg r-cran-rann r-cran-rappdirs r-cran-rbibutils 92s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppannoy r-cran-rcpparmadillo 92s r-cran-rcppeigen r-cran-rcpphnsw r-cran-rcppprogress r-cran-rcpptoml 92s r-cran-rcurl r-cran-rdpack r-cran-recipes r-cran-reshape2 r-cran-restfulr 92s r-cran-reticulate r-cran-rjson r-cran-rlang r-cran-rmarkdown 92s r-cran-robustbase r-cran-rocr r-cran-rpart r-cran-rprojroot r-cran-rspectra 92s r-cran-rsvd r-cran-rtsne r-cran-runit r-cran-sandwich r-cran-sass 92s r-cran-scales r-cran-scattermore r-cran-sctransform r-cran-segmented 92s r-cran-seurat r-cran-seuratobject r-cran-shape r-cran-shiny r-cran-shinyjs 92s r-cran-sitmo r-cran-slam r-cran-sn r-cran-snow r-cran-sourcetools r-cran-sp 92s r-cran-spam r-cran-sparsem r-cran-spatstat.data r-cran-spatstat.explore 92s r-cran-spatstat.geom r-cran-spatstat.random r-cran-spatstat.sparse 92s r-cran-spatstat.utils r-cran-squarem r-cran-statmod r-cran-stringi 92s r-cran-stringr r-cran-survival r-cran-sys r-cran-systemfonts r-cran-tensor 92s r-cran-testthat r-cran-textshaping r-cran-tfisher r-cran-th.data 92s r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-timechange 92s r-cran-timedate r-cran-tinytex r-cran-tzdb r-cran-utf8 r-cran-uwot 92s r-cran-vctrs r-cran-vgam r-cran-vipor r-cran-viridis r-cran-viridislite 92s r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml r-cran-xtable r-cran-yaml 92s r-cran-zoo unzip x11-common xdg-utils zip zlib1g-dev 92s 0 upgraded, 371 newly installed, 0 to remove and 0 not upgraded. 92s Need to get 415 MB of archives. 92s After this operation, 1097 MB of additional disk space will be used. 92s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 92s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 92s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB] 92s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB] 92s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB] 92s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 92s Get:7 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 92s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 92s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 11+nmu1 [5936 B] 92s Get:10 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 92s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-13ubuntu1 [148 kB] 92s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libsuitesparseconfig7 amd64 1:7.8.3+dfsg-2 [13.4 kB] 92s Get:13 http://ftpmaster.internal/ubuntu plucky/universe amd64 libamd3 amd64 1:7.8.3+dfsg-2 [31.1 kB] 92s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 14.2.0-13ubuntu1 [2998 kB] 92s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-4 [332 kB] 92s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 14.2.0-13ubuntu1 [29.1 kB] 92s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 14.2.0-13ubuntu1 [1317 kB] 92s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 14.2.0-13ubuntu1 [2732 kB] 92s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 14.2.0-13ubuntu1 [1177 kB] 92s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 14.2.0-13ubuntu1 [1634 kB] 92s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 14.2.0-13ubuntu1 [153 kB] 92s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-13ubuntu1 [2815 kB] 92s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-13ubuntu1 [2508 kB] 92s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost1.83-dev amd64 1.83.0-4ubuntu2 [10.7 MB] 92s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost-dev amd64 1.83.0.2ubuntu1 [4468 B] 92s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 92s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 92s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 92s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 92s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 92s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libcolamd3 amd64 1:7.8.3+dfsg-2 [19.5 kB] 92s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 92s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB] 92s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libfftw3-double3 amd64 3.3.10-2fakesync1build1 [839 kB] 92s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-13ubuntu1 [909 kB] 92s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl7 amd64 2.5.4-2.1 [46.1 kB] 92s Get:37 http://ftpmaster.internal/ubuntu plucky/universe amd64 libglpk40 amd64 5.0-1build2 [369 kB] 92s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 92s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB] 92s Get:40 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 92s Get:41 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-310 amd64 1.14.5+repack-3 [1519 kB] 92s Get:42 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-310 amd64 1.14.5+repack-3 [62.6 kB] 92s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 92s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 92s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 92s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 92s Get:47 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 92s Get:48 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 92s Get:49 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 92s Get:50 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 92s Get:51 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 92s Get:52 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 92s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 93s Get:54 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 93s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 93s Get:56 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 93s Get:57 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 93s Get:58 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 93s Get:59 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 93s Get:60 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 93s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-4 [3177 kB] 93s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 93s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 liblua5.4-0 amd64 5.4.7-1 [196 kB] 93s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 93s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 93s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.56.1-1 [255 kB] 93s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.56.1-1 [52.6 kB] 93s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.56.1-1 [29.1 kB] 93s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB] 93s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB] 93s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 93s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 93s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB] 93s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 93s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 93s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 93s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 93s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 93s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB] 93s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 93s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu2 [185 kB] 93s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 93s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 93s Get:84 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.2-1build1 [28.9 MB] 93s Get:85 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-2 [96.6 kB] 93s Get:86 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-2 [2554 B] 93s Get:87 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 93s Get:88 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 93s Get:89 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 93s Get:90 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 93s Get:91 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc amd64 3.1.11.1+ds-2 [27.2 MB] 93s Get:92 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 93s Get:93 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biobase amd64 2.66.0-2 [2332 kB] 93s Get:94 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2065 kB] 93s Get:95 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 93s Get:96 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-formatr all 1.14-2 [152 kB] 93s Get:97 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 93s Get:98 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 93s Get:99 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 93s Get:100 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 93s Get:101 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-codetools all 0.2-20-1 [90.5 kB] 93s Get:102 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bh all 1.84.0-1 [5962 B] 93s Get:103 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cpp11 all 0.5.1-1 [233 kB] 93s Get:104 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocparallel amd64 1.40.0-2 [1337 kB] 94s Get:105 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-graph amd64 1.84.1-1 [1298 kB] 94s Get:106 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rbgl amd64 1.82.0+dfsg-2 [588 kB] 94s Get:107 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xml amd64 3.99-0.18-1 [1748 kB] 94s Get:108 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bitops amd64 1.0-9-1 [30.3 kB] 94s Get:109 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcurl amd64 1.98-1.16+dfsg-1 [807 kB] 94s Get:110 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-runit all 0.4.33-1 [377 kB] 94s Get:111 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 94s Get:112 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocviews all 1.74.0-2 [670 kB] 94s Get:113 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-iranges amd64 2.40.1-2 [2310 kB] 94s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 94s Get:115 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 94s Get:116 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-xvector amd64 0.46.0-2 [620 kB] 94s Get:117 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-curl amd64 6.1.0+dfsg-1 [195 kB] 94s Get:118 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.8.9+dfsg-1 [445 kB] 94s Get:119 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 94s Get:120 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB] 94s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB] 94s Get:122 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-openssl amd64 2.2.0+dfsg-1 [405 kB] 94s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB] 94s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 94s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 94s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 94s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodb all 1.42.1+dfsg-2 [3883 kB] 94s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB] 94s Get:129 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biostrings amd64 2.74.1+dfsg-2 [13.3 MB] 95s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 95s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrix amd64 1.7-2-1 [4456 kB] 95s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixstats amd64 1.5.0-1 [542 kB] 95s Get:133 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 95s Get:134 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-abind all 1.4-8-1 [66.9 kB] 95s Get:135 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-s4arrays amd64 1.6.0+dfsg-2 [698 kB] 95s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-sparsearray amd64 1.6.1+dfsg-1 [1391 kB] 95s Get:137 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-delayedarray amd64 0.32.0+dfsg-2 [2064 kB] 95s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomicranges amd64 1.58.0+dfsg-2 [2083 kB] 95s Get:139 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 95s Get:140 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-locfit amd64 1.5-9.10-1 [518 kB] 95s Get:141 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.3-1 [1348 kB] 95s Get:142 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 95s Get:143 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.5-1 [1719 kB] 95s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 95s Get:145 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 95s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 95s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mass amd64 7.3-64-1 [1114 kB] 95s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nlme amd64 3.1.167-1 [2320 kB] 95s Get:149 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB] 95s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB] 95s Get:151 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 95s Get:152 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colorspace amd64 2.1-1+dfsg-1 [1563 kB] 95s Get:153 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-munsell all 0.5.1-1 [213 kB] 95s Get:154 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 95s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridislite all 0.4.2-2 [1088 kB] 95s Get:156 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scales all 1.3.0-1 [603 kB] 95s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 95s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 95s Get:159 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 95s Get:160 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 95s Get:161 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 95s Get:162 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 95s Get:163 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB] 95s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 95s Get:165 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 95s Get:166 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 95s Get:167 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.14-1 [1998 kB] 95s Get:168 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpparmadillo amd64 14.2.2-1-1 [864 kB] 95s Get:169 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-deseq2 amd64 1.46.0+dfsg-2 [1250 kB] 95s Get:170 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rhtslib amd64 3.2.0+dfsg-2 [1499 kB] 95s Get:171 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rsamtools amd64 2.22.0+dfsg-2 [3745 kB] 95s Get:172 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomicalignments amd64 1.42.0-2 [2165 kB] 95s Get:173 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-hsmmsinglecell all 1.26.0-2 [16.7 MB] 95s Get:174 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-statmod amd64 1.5.0-1 [295 kB] 95s Get:175 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-limma amd64 3.62.2+dfsg-1 [1969 kB] 95s Get:176 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vgam amd64 1.1-12-1 [7658 kB] 96s Get:177 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-irlba amd64 2.3.5.1-4 [295 kB] 96s Get:178 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1428 kB] 96s Get:179 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ddrtree amd64 0.1.5-2 [154 kB] 96s Get:180 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-igraph amd64 2.1.4-1 [5357 kB] 96s Get:181 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB] 96s Get:182 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cluster amd64 2.1.8-1 [579 kB] 96s Get:183 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-combinat all 0.0-8-7build1 [43.1 kB] 96s Get:184 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastica amd64 1.2-7-1 [46.6 kB] 96s Get:185 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rtsne amd64 0.17-1 [109 kB] 96s Get:186 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringi amd64 1.8.4-1build1 [927 kB] 96s Get:187 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 96s Get:188 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reshape2 amd64 1.4.4-2build1 [114 kB] 96s Get:189 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-leidenbase amd64 0.1.31-1 [2513 kB] 96s Get:190 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB] 96s Get:191 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB] 96s Get:192 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB] 96s Get:193 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pheatmap all 1.0.12-2build1 [78.2 kB] 96s Get:194 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB] 96s Get:195 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-slam amd64 0.1-55-1 [188 kB] 96s Get:196 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gridextra all 2.3-3build1 [1024 kB] 96s Get:197 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridis all 0.6.5-1 [2770 kB] 96s Get:198 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rann amd64 2.6.2-1 [46.3 kB] 96s Get:199 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-monocle amd64 2.34.0-2 [1522 kB] 96s Get:200 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-survival amd64 3.8-3-1 [8239 kB] 96s Get:201 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-multtest amd64 2.62.0-2 [844 kB] 96s Get:202 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rjson amd64 0.2.23-1 [104 kB] 96s Get:203 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB] 96s Get:204 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-restfulr amd64 0.0.15-1 [380 kB] 96s Get:205 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rtracklayer amd64 1.66.0-2 [5227 kB] 96s Get:206 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-singlecellexperiment all 1.28.1+ds-2 [829 kB] 96s Get:207 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB] 96s Get:208 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ape amd64 5.8-1-1 [2918 kB] 96s Get:209 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 96s Get:210 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-beeswarm amd64 0.4.0-1 [82.3 kB] 96s Get:211 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bit amd64 4.0.5-1 [1063 kB] 96s Get:212 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bit64 amd64 4.0.5-1 [465 kB] 96s Get:213 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 96s Get:214 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 96s Get:215 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 96s Get:216 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 96s Get:217 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 96s Get:218 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 96s Get:219 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB] 96s Get:220 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 96s Get:221 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 96s Get:222 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 96s Get:223 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cairo amd64 1.6-2-1 [88.8 kB] 96s Get:224 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ps amd64 1.8.1-1 [397 kB] 96s Get:225 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-processx amd64 3.8.5-1 [356 kB] 96s Get:226 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 96s Get:227 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-class amd64 7.3-23-1 [92.7 kB] 96s Get:228 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-e1071 amd64 1.7-16-1 [565 kB] 96s Get:229 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-iterators all 1.0.14-1 [336 kB] 96s Get:230 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-foreach all 1.5.2-1 [124 kB] 96s Get:231 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-data.table amd64 1.16.4+dfsg-1 [2032 kB] 96s Get:232 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-modelmetrics amd64 1.2.2.2-1build1 [128 kB] 96s Get:233 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proc amd64 1.18.5-1 [966 kB] 96s Get:234 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tzdb amd64 0.4.0-2 [521 kB] 96s Get:235 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-clock amd64 0.7.1-1 [1804 kB] 96s Get:236 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gower amd64 1.0.2-1 [210 kB] 96s Get:237 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-hardhat all 1.4.0+dfsg-1 [565 kB] 96s Get:238 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rpart amd64 4.1.24-1 [670 kB] 96s Get:239 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nnet amd64 7.3-20-1 [116 kB] 96s Get:240 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shape all 1.4.6.1-1 [749 kB] 96s Get:241 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diagram all 1.6.5-2 [656 kB] 96s Get:242 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernsmooth amd64 2.23-26-1 [94.5 kB] 96s Get:243 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-globals all 0.16.3-1 [120 kB] 96s Get:244 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-listenv all 0.9.1+dfsg-1 [112 kB] 96s Get:245 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-parallelly amd64 1.41.0-1 [507 kB] 96s Get:246 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-future all 1.34.0+dfsg-1 [646 kB] 96s Get:247 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-future.apply all 1.11.3+dfsg-1 [175 kB] 96s Get:248 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-numderiv all 2016.8-1.1-3 [115 kB] 96s Get:249 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-progressr all 0.15.1-1 [353 kB] 96s Get:250 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-squarem all 2021.1-1 [179 kB] 96s Get:251 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lava all 1.7.3+dfsg-2 [2156 kB] 96s Get:252 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-prodlim amd64 2024.06.25-1 [415 kB] 96s Get:253 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ipred amd64 0.9-15-1 [386 kB] 96s Get:254 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-timechange amd64 0.3.0-1 [178 kB] 96s Get:255 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lubridate amd64 1.9.4+dfsg-1 [1009 kB] 96s Get:256 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-purrr amd64 1.0.2-1 [502 kB] 96s Get:257 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 96s Get:258 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-timedate amd64 4041.110-1 [1208 kB] 96s Get:259 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-recipes all 1.1.0+dfsg-1 [2035 kB] 96s Get:260 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-caret amd64 7.0-1+dfsg-1 [3460 kB] 96s Get:261 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-catools amd64 1.18.2-1 [201 kB] 96s Get:262 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 1.0.3-1 [114 kB] 96s Get:263 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xfun amd64 0.50+dfsg-1 [568 kB] 96s Get:264 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 97s Get:265 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 97s Get:266 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 97s Get:267 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 97s Get:268 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tinytex all 0.54-1 [147 kB] 97s Get:269 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-modernizr all 3.13.0-0.1 [101 kB] 97s Get:270 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB] 97s Get:271 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB] 97s Get:272 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 97s Get:273 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 97s Get:274 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 97s Get:275 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.2-2 [137 kB] 97s Get:276 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 97s Get:277 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.9.1+dfsg-1 [3111 kB] 97s Get:278 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 97s Get:279 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 97s Get:280 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-miniui all 0.1.1.1-3build1 [36.1 kB] 97s Get:281 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shinyjs all 2.1.0-1 [967 kB] 97s Get:282 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colourpicker all 1.3.0+dfsg-1 [1191 kB] 97s Get:283 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-conquer amd64 1.3.3-1 [499 kB] 97s Get:284 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cowplot all 1.1.3+dfsg-1 [614 kB] 97s Get:285 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lazyeval amd64 0.2.2-1build1 [144 kB] 97s Get:286 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 97s Get:287 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-deldir amd64 2.0-4-1build1 [270 kB] 97s Get:288 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-deoptimr all 1.1-3-1-1 [76.6 kB] 97s Get:289 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 97s Get:290 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 97s Get:291 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dotcall64 amd64 1.1-1-1 [38.1 kB] 97s Get:292 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sitmo amd64 2.0.2-1 [130 kB] 97s Get:293 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dqrng amd64 0.3.2+dfsg-1 [161 kB] 97s Get:294 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastdummies all 1.7.5-1 [51.1 kB] 97s Get:295 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fitdistrplus all 1.2-2-1 [2287 kB] 97s Get:296 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fnn amd64 1.1.4.1-1 [126 kB] 97s Get:297 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtools amd64 3.9.5-1 [340 kB] 97s Get:298 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gdata all 3.0.1-1 [491 kB] 97s Get:299 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vipor all 0.4.7-1 [4624 kB] 97s Get:300 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggbeeswarm all 0.7.2-1 [1732 kB] 97s Get:301 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-png amd64 0.1-8-1build2 [40.6 kB] 97s Get:302 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-systemfonts amd64 1.2.1-1 [347 kB] 97s Get:303 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-textshaping amd64 0.3.7-2 [95.5 kB] 97s Get:304 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ragg amd64 1.3.3-1 [510 kB] 97s Get:305 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggrastr all 1.0.2-1 [2566 kB] 97s Get:306 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggrepel amd64 0.9.6-1 [270 kB] 97s Get:307 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggridges all 0.5.6-1 [2195 kB] 97s Get:308 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-goftest amd64 1.2-3-1 [59.5 kB] 97s Get:309 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gplots all 3.2.0-1 [484 kB] 97s Get:310 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-hdf5r amd64 1.3.12+dfsg-1 [1985 kB] 97s Get:311 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rprojroot all 2.0.4-2 [125 kB] 97s Get:312 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-here all 1.0.1-2 [50.3 kB] 97s Get:313 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ica all 1.0-3-1 [85.4 kB] 97s Get:314 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernlab amd64 0.9-33-1 [1947 kB] 97s Get:315 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpptoml amd64 0.2.2+dfsg-1 [110 kB] 97s Get:316 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reticulate amd64 1.39.0+dfsg-1 [1238 kB] 97s Get:317 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-leiden all 0.4.3.1+dfsg-1 [71.9 kB] 97s Get:318 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-zoo amd64 1.8-12-2 [984 kB] 97s Get:319 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lmtest amd64 0.9.40-1 [396 kB] 97s Get:320 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mathjaxr all 1.6-0-1 [605 kB] 97s Get:321 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixmodels all 0.5-3-1 [361 kB] 97s Get:322 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rbibutils amd64 2.3-1 [1023 kB] 97s Get:323 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rdpack all 2.6.2-1 [757 kB] 97s Get:324 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mnormt amd64 2.1.1-2 [170 kB] 97s Get:325 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sparsem amd64 1.84-2-1 [813 kB] 97s Get:326 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-quantreg amd64 6.00-1 [1454 kB] 97s Get:327 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sn all 2.1.1-2 [1815 kB] 97s Get:328 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mvtnorm amd64 1.3-3-1 [923 kB] 97s Get:329 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tfisher all 0.2.0-3 [79.8 kB] 97s Get:330 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plotrix all 3.8-4-1 [1120 kB] 97s Get:331 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-th.data all 1.1-3-1 [8723 kB] 98s Get:332 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sandwich all 3.1-1-1 [1483 kB] 98s Get:333 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-multcomp all 1.4-28-1 [700 kB] 98s Get:334 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mutoss all 0.1-13-1 [1123 kB] 98s Get:335 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-robustbase amd64 0.99-4-1-1 [3038 kB] 98s Get:336 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-qqconf amd64 1.3.2+dfsg-1 [157 kB] 98s Get:337 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-metap all 1.11-2 [570 kB] 98s Get:338 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plotly all 4.10.4+dfsg-2 [3666 kB] 98s Get:339 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-segmented all 2.1-3-1 [1366 kB] 98s Get:340 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mixtools amd64 2.0.0-1 [1399 kB] 98s Get:341 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-patchwork all 1.3.0-1 [3220 kB] 98s Get:342 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pbapply all 1.7-2-1 [102 kB] 98s Get:343 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgbuild all 1.4.6-1 [213 kB] 98s Get:344 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgload all 1.4.0-1 [247 kB] 98s Get:345 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-polyclip amd64 1.10-7-1 [116 kB] 98s Get:346 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 98s Get:347 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 98s Get:348 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.oo all 1.27.0-1 [979 kB] 98s Get:349 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.utils all 2.12.3-1 [1386 kB] 98s Get:350 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppannoy amd64 0.0.22-1 [235 kB] 98s Get:351 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpphnsw amd64 0.5.0+ds-1 [171 kB] 98s Get:352 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppprogress all 0.4.2-2build1 [22.0 kB] 98s Get:353 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rocr all 1.0-11-3 [456 kB] 98s Get:354 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rspectra amd64 0.16-2-1 [448 kB] 98s Get:355 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rsvd all 1.0.5-1 [3589 kB] 98s Get:356 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scattermore amd64 1.2-1 [331 kB] 98s Get:357 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sctransform amd64 0.4.1-1 [504 kB] 98s Get:358 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sp amd64 1:2.1-4+dfsg-1 [1472 kB] 98s Get:359 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spam amd64 2.11-1-1 [2756 kB] 98s Get:360 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-seuratobject amd64 5.0.2-1 [1744 kB] 98s Get:361 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.utils amd64 3.1-2-1 [383 kB] 98s Get:362 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.data all 3.1-4-1 [4047 kB] 98s Get:363 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.geom amd64 3.2-9-2 [3946 kB] 98s Get:364 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.random amd64 3.2-3-1 [1169 kB] 98s Get:365 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tensor all 1.5-4 [15.7 kB] 98s Get:366 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.sparse amd64 3.1-0-1 [221 kB] 98s Get:367 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.explore amd64 3.2-7-1 [3432 kB] 98s Get:368 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-uwot amd64 0.2.2-2 [1044 kB] 98s Get:369 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-seurat amd64 5.0.1-1 [3543 kB] 98s Get:370 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-waldo all 0.6.1-1 [150 kB] 98s Get:371 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-testthat amd64 3.2.3-1 [1651 kB] 100s Preconfiguring packages ... 100s Fetched 415 MB in 7s (63.3 MB/s) 100s Selecting previously unselected package fonts-dejavu-mono. 100s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108876 files and directories currently installed.) 100s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8_all.deb ... 100s Unpacking fonts-dejavu-mono (2.37-8) ... 100s Selecting previously unselected package fonts-dejavu-core. 100s Preparing to unpack .../001-fonts-dejavu-core_2.37-8_all.deb ... 100s Unpacking fonts-dejavu-core (2.37-8) ... 100s Selecting previously unselected package fontconfig-config. 100s Preparing to unpack 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109s Unpacking r-cran-futile.options (1.0.1-3build1) ... 109s Selecting previously unselected package r-cran-futile.logger. 109s Preparing to unpack .../098-r-cran-futile.logger_1.4.3-4build1_all.deb ... 109s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 109s Selecting previously unselected package r-cran-snow. 109s Preparing to unpack .../099-r-cran-snow_1%3a0.4.4-2_all.deb ... 109s Unpacking r-cran-snow (1:0.4.4-2) ... 109s Selecting previously unselected package r-cran-codetools. 109s Preparing to unpack .../100-r-cran-codetools_0.2-20-1_all.deb ... 109s Unpacking r-cran-codetools (0.2-20-1) ... 109s Selecting previously unselected package r-cran-bh. 109s Preparing to unpack .../101-r-cran-bh_1.84.0-1_all.deb ... 109s Unpacking r-cran-bh (1.84.0-1) ... 109s Selecting previously unselected package r-cran-cpp11. 109s Preparing to unpack .../102-r-cran-cpp11_0.5.1-1_all.deb ... 109s Unpacking r-cran-cpp11 (0.5.1-1) ... 109s Selecting previously unselected package r-bioc-biocparallel. 109s Preparing to unpack .../103-r-bioc-biocparallel_1.40.0-2_amd64.deb ... 109s Unpacking r-bioc-biocparallel (1.40.0-2) ... 109s Selecting previously unselected package r-bioc-graph. 109s Preparing to unpack .../104-r-bioc-graph_1.84.1-1_amd64.deb ... 109s Unpacking r-bioc-graph (1.84.1-1) ... 109s Selecting previously unselected package r-bioc-rbgl. 109s Preparing to unpack .../105-r-bioc-rbgl_1.82.0+dfsg-2_amd64.deb ... 109s Unpacking r-bioc-rbgl (1.82.0+dfsg-2) ... 109s Selecting previously unselected package r-cran-xml. 109s Preparing to unpack .../106-r-cran-xml_3.99-0.18-1_amd64.deb ... 109s Unpacking r-cran-xml (3.99-0.18-1) ... 110s Selecting previously unselected package r-cran-bitops. 110s Preparing to unpack .../107-r-cran-bitops_1.0-9-1_amd64.deb ... 110s Unpacking r-cran-bitops (1.0-9-1) ... 110s Selecting previously unselected package r-cran-rcurl. 110s Preparing to unpack .../108-r-cran-rcurl_1.98-1.16+dfsg-1_amd64.deb ... 110s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 110s Selecting previously unselected package r-cran-runit. 110s Preparing to unpack .../109-r-cran-runit_0.4.33-1_all.deb ... 110s Unpacking r-cran-runit (0.4.33-1) ... 110s Selecting previously unselected package r-cran-biocmanager. 110s Preparing to unpack .../110-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 110s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 110s Selecting previously unselected package r-bioc-biocviews. 110s Preparing to unpack .../111-r-bioc-biocviews_1.74.0-2_all.deb ... 110s Unpacking r-bioc-biocviews (1.74.0-2) ... 110s Selecting previously unselected package r-bioc-iranges. 110s Preparing to unpack .../112-r-bioc-iranges_2.40.1-2_amd64.deb ... 110s Unpacking r-bioc-iranges (2.40.1-2) ... 110s Selecting previously unselected package zlib1g-dev:amd64. 110s Preparing to unpack .../113-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ... 110s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 110s Selecting previously unselected package r-bioc-zlibbioc. 110s Preparing to unpack .../114-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 110s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 110s Selecting previously unselected package r-bioc-xvector. 110s Preparing to unpack .../115-r-bioc-xvector_0.46.0-2_amd64.deb ... 110s Unpacking r-bioc-xvector (0.46.0-2) ... 110s Selecting previously unselected package r-cran-curl. 110s Preparing to unpack .../116-r-cran-curl_6.1.0+dfsg-1_amd64.deb ... 110s Unpacking r-cran-curl (6.1.0+dfsg-1) ... 110s Selecting previously unselected package r-cran-jsonlite. 110s Preparing to unpack .../117-r-cran-jsonlite_1.8.9+dfsg-1_amd64.deb ... 110s Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ... 110s Selecting previously unselected package r-cran-mime. 110s Preparing to unpack .../118-r-cran-mime_0.12-2_amd64.deb ... 110s Unpacking r-cran-mime (0.12-2) ... 110s Selecting previously unselected package r-cran-sys. 110s Preparing to unpack .../119-r-cran-sys_3.4.3-1_amd64.deb ... 110s Unpacking r-cran-sys (3.4.3-1) ... 110s Selecting previously unselected package r-cran-askpass. 110s Preparing to unpack .../120-r-cran-askpass_1.2.1-1_amd64.deb ... 110s Unpacking r-cran-askpass (1.2.1-1) ... 110s Selecting previously unselected package r-cran-openssl. 110s Preparing to unpack .../121-r-cran-openssl_2.2.0+dfsg-1_amd64.deb ... 110s Unpacking r-cran-openssl (2.2.0+dfsg-1) ... 110s Selecting previously unselected package r-cran-r6. 110s Preparing to unpack .../122-r-cran-r6_2.5.1-1_all.deb ... 110s Unpacking r-cran-r6 (2.5.1-1) ... 110s Selecting previously unselected package r-cran-httr. 110s Preparing to unpack .../123-r-cran-httr_1.4.7+dfsg-1_all.deb ... 110s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 110s Selecting previously unselected package r-bioc-ucsc.utils. 110s Preparing to unpack .../124-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 110s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 110s Selecting previously unselected package r-bioc-genomeinfodbdata. 110s Preparing to unpack .../125-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 110s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 110s Selecting previously unselected package r-bioc-genomeinfodb. 110s Preparing to unpack .../126-r-bioc-genomeinfodb_1.42.1+dfsg-2_all.deb ... 110s Unpacking r-bioc-genomeinfodb (1.42.1+dfsg-2) ... 111s Selecting previously unselected package r-cran-crayon. 111s Preparing to unpack .../127-r-cran-crayon_1.5.3-1_all.deb ... 111s Unpacking r-cran-crayon (1.5.3-1) ... 111s Selecting previously unselected package r-bioc-biostrings. 111s Preparing to unpack .../128-r-bioc-biostrings_2.74.1+dfsg-2_amd64.deb ... 111s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 111s Selecting previously unselected package r-cran-lattice. 111s Preparing to unpack .../129-r-cran-lattice_0.22-6-1_amd64.deb ... 111s Unpacking r-cran-lattice (0.22-6-1) ... 111s Selecting previously unselected package r-cran-matrix. 111s Preparing to unpack .../130-r-cran-matrix_1.7-2-1_amd64.deb ... 111s Unpacking r-cran-matrix (1.7-2-1) ... 111s Selecting previously unselected package r-cran-matrixstats. 111s Preparing to unpack .../131-r-cran-matrixstats_1.5.0-1_amd64.deb ... 111s Unpacking r-cran-matrixstats (1.5.0-1) ... 111s Selecting previously unselected package r-bioc-matrixgenerics. 111s Preparing to unpack .../132-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 111s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 111s Selecting previously unselected package r-cran-abind. 111s Preparing to unpack .../133-r-cran-abind_1.4-8-1_all.deb ... 111s Unpacking r-cran-abind (1.4-8-1) ... 111s Selecting previously unselected package r-bioc-s4arrays. 111s Preparing to unpack .../134-r-bioc-s4arrays_1.6.0+dfsg-2_amd64.deb ... 111s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 111s Selecting previously unselected package r-bioc-sparsearray. 111s Preparing to unpack .../135-r-bioc-sparsearray_1.6.1+dfsg-1_amd64.deb ... 111s Unpacking r-bioc-sparsearray (1.6.1+dfsg-1) ... 111s Selecting previously unselected package r-bioc-delayedarray. 111s Preparing to unpack .../136-r-bioc-delayedarray_0.32.0+dfsg-2_amd64.deb ... 111s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 111s Selecting previously unselected package r-bioc-genomicranges. 111s Preparing to unpack .../137-r-bioc-genomicranges_1.58.0+dfsg-2_amd64.deb ... 111s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 111s Selecting previously unselected package r-bioc-summarizedexperiment. 111s Preparing to unpack .../138-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 111s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 111s Selecting previously unselected package r-cran-locfit. 111s Preparing to unpack .../139-r-cran-locfit_1.5-9.10-1_amd64.deb ... 111s Unpacking r-cran-locfit (1.5-9.10-1) ... 111s Selecting previously unselected package r-cran-cli. 111s Preparing to unpack .../140-r-cran-cli_3.6.3-1_amd64.deb ... 111s Unpacking r-cran-cli (3.6.3-1) ... 111s Selecting previously unselected package r-cran-glue. 111s Preparing to unpack .../141-r-cran-glue_1.8.0-1_amd64.deb ... 111s Unpacking r-cran-glue (1.8.0-1) ... 112s Selecting previously unselected package r-cran-rlang. 112s Preparing to unpack .../142-r-cran-rlang_1.1.5-1_amd64.deb ... 112s Unpacking r-cran-rlang (1.1.5-1) ... 112s Selecting previously unselected package r-cran-lifecycle. 112s Preparing to unpack .../143-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 112s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 112s Selecting previously unselected package r-cran-gtable. 112s Preparing to unpack .../144-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 112s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 112s Selecting previously unselected package r-cran-isoband. 112s Preparing to unpack .../145-r-cran-isoband_0.2.7-1_amd64.deb ... 112s Unpacking r-cran-isoband (0.2.7-1) ... 112s Selecting previously unselected package r-cran-mass. 112s Preparing to unpack .../146-r-cran-mass_7.3-64-1_amd64.deb ... 112s Unpacking r-cran-mass (7.3-64-1) ... 112s Selecting previously unselected package r-cran-nlme. 112s Preparing to unpack .../147-r-cran-nlme_3.1.167-1_amd64.deb ... 112s Unpacking r-cran-nlme (3.1.167-1) ... 112s Selecting previously unselected package r-cran-mgcv. 112s Preparing to unpack .../148-r-cran-mgcv_1.9-1-1_amd64.deb ... 112s Unpacking r-cran-mgcv (1.9-1-1) ... 112s Selecting previously unselected package r-cran-farver. 112s Preparing to unpack .../149-r-cran-farver_2.1.2-1_amd64.deb ... 112s Unpacking r-cran-farver (2.1.2-1) ... 112s Selecting previously unselected package r-cran-labeling. 112s Preparing to unpack .../150-r-cran-labeling_0.4.3-1_all.deb ... 112s Unpacking r-cran-labeling (0.4.3-1) ... 112s Selecting previously unselected package r-cran-colorspace. 112s Preparing to unpack .../151-r-cran-colorspace_2.1-1+dfsg-1_amd64.deb ... 112s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 112s Selecting previously unselected package r-cran-munsell. 112s Preparing to unpack .../152-r-cran-munsell_0.5.1-1_all.deb ... 112s Unpacking r-cran-munsell (0.5.1-1) ... 112s Selecting previously unselected package r-cran-rcolorbrewer. 112s Preparing to unpack .../153-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 112s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 112s Selecting previously unselected package r-cran-viridislite. 112s Preparing to unpack .../154-r-cran-viridislite_0.4.2-2_all.deb ... 112s Unpacking r-cran-viridislite (0.4.2-2) ... 112s Selecting previously unselected package r-cran-scales. 112s Preparing to unpack .../155-r-cran-scales_1.3.0-1_all.deb ... 112s Unpacking r-cran-scales (1.3.0-1) ... 112s Selecting previously unselected package r-cran-fansi. 112s Preparing to unpack .../156-r-cran-fansi_1.0.5-1_amd64.deb ... 112s Unpacking r-cran-fansi (1.0.5-1) ... 112s Selecting previously unselected package r-cran-magrittr. 112s Preparing to unpack .../157-r-cran-magrittr_2.0.3-1_amd64.deb ... 112s Unpacking r-cran-magrittr (2.0.3-1) ... 112s Selecting previously unselected package r-cran-utf8. 113s Preparing to unpack .../158-r-cran-utf8_1.2.4-1_amd64.deb ... 113s Unpacking r-cran-utf8 (1.2.4-1) ... 113s Selecting previously unselected package r-cran-vctrs. 113s Preparing to unpack .../159-r-cran-vctrs_0.6.5-1_amd64.deb ... 113s Unpacking r-cran-vctrs (0.6.5-1) ... 113s Selecting previously unselected package r-cran-pillar. 113s Preparing to unpack .../160-r-cran-pillar_1.10.1+dfsg-1_all.deb ... 113s Unpacking r-cran-pillar (1.10.1+dfsg-1) ... 113s Selecting previously unselected package r-cran-pkgconfig. 113s Preparing to unpack .../161-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 113s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 113s Selecting previously unselected package r-cran-tibble. 113s Preparing to unpack .../162-r-cran-tibble_3.2.1+dfsg-3_amd64.deb ... 113s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 113s Selecting previously unselected package r-cran-withr. 113s Preparing to unpack .../163-r-cran-withr_3.0.2+dfsg-1_all.deb ... 113s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 113s Selecting previously unselected package r-cran-ggplot2. 113s Preparing to unpack .../164-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 113s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 113s Selecting previously unselected package r-cran-pkgkitten. 113s Preparing to unpack .../165-r-cran-pkgkitten_0.2.4-1_all.deb ... 113s Unpacking r-cran-pkgkitten (0.2.4-1) ... 113s Selecting previously unselected package r-cran-rcpp. 113s Preparing to unpack .../166-r-cran-rcpp_1.0.14-1_amd64.deb ... 113s Unpacking r-cran-rcpp (1.0.14-1) ... 113s Selecting previously unselected package r-cran-rcpparmadillo. 113s Preparing to unpack .../167-r-cran-rcpparmadillo_14.2.2-1-1_amd64.deb ... 113s Unpacking r-cran-rcpparmadillo (14.2.2-1-1) ... 113s Selecting previously unselected package r-bioc-deseq2. 113s Preparing to unpack .../168-r-bioc-deseq2_1.46.0+dfsg-2_amd64.deb ... 113s Unpacking r-bioc-deseq2 (1.46.0+dfsg-2) ... 114s Selecting previously unselected package r-bioc-rhtslib. 114s Preparing to unpack .../169-r-bioc-rhtslib_3.2.0+dfsg-2_amd64.deb ... 114s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 114s Selecting previously unselected package r-bioc-rsamtools. 114s Preparing to unpack .../170-r-bioc-rsamtools_2.22.0+dfsg-2_amd64.deb ... 114s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 114s Selecting previously unselected package r-bioc-genomicalignments. 114s Preparing to unpack .../171-r-bioc-genomicalignments_1.42.0-2_amd64.deb ... 114s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 114s Selecting previously unselected package r-bioc-hsmmsinglecell. 114s Preparing to unpack .../172-r-bioc-hsmmsinglecell_1.26.0-2_all.deb ... 114s Unpacking r-bioc-hsmmsinglecell (1.26.0-2) ... 114s Selecting previously unselected package r-cran-statmod. 114s Preparing to unpack .../173-r-cran-statmod_1.5.0-1_amd64.deb ... 114s Unpacking r-cran-statmod (1.5.0-1) ... 114s Selecting previously unselected package r-bioc-limma. 114s Preparing to unpack .../174-r-bioc-limma_3.62.2+dfsg-1_amd64.deb ... 114s Unpacking r-bioc-limma (3.62.2+dfsg-1) ... 114s Selecting previously unselected package r-cran-vgam. 114s Preparing to unpack .../175-r-cran-vgam_1.1-12-1_amd64.deb ... 114s Unpacking r-cran-vgam (1.1-12-1) ... 114s Selecting previously unselected package r-cran-irlba. 114s Preparing to unpack .../176-r-cran-irlba_2.3.5.1-4_amd64.deb ... 114s Unpacking r-cran-irlba (2.3.5.1-4) ... 114s Selecting previously unselected package r-cran-rcppeigen. 114s Preparing to unpack .../177-r-cran-rcppeigen_0.3.4.0.2-1_amd64.deb ... 114s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 114s Selecting previously unselected package r-cran-ddrtree. 114s Preparing to unpack .../178-r-cran-ddrtree_0.1.5-2_amd64.deb ... 114s Unpacking r-cran-ddrtree (0.1.5-2) ... 114s Selecting previously unselected package r-cran-igraph. 114s Preparing to unpack .../179-r-cran-igraph_2.1.4-1_amd64.deb ... 114s Unpacking r-cran-igraph (2.1.4-1) ... 114s Selecting previously unselected package r-cran-plyr. 114s Preparing to unpack .../180-r-cran-plyr_1.8.9-1_amd64.deb ... 114s Unpacking r-cran-plyr (1.8.9-1) ... 114s Selecting previously unselected package r-cran-cluster. 114s Preparing to unpack .../181-r-cran-cluster_2.1.8-1_amd64.deb ... 114s Unpacking r-cran-cluster (2.1.8-1) ... 115s Selecting previously unselected package r-cran-combinat. 115s Preparing to unpack .../182-r-cran-combinat_0.0-8-7build1_all.deb ... 115s Unpacking r-cran-combinat (0.0-8-7build1) ... 115s Selecting previously unselected package r-cran-fastica. 115s Preparing to unpack .../183-r-cran-fastica_1.2-7-1_amd64.deb ... 115s Unpacking r-cran-fastica (1.2-7-1) ... 115s Selecting previously unselected package r-cran-rtsne. 115s Preparing to unpack .../184-r-cran-rtsne_0.17-1_amd64.deb ... 115s Unpacking r-cran-rtsne (0.17-1) ... 115s Selecting previously unselected package r-cran-stringi. 115s Preparing to unpack .../185-r-cran-stringi_1.8.4-1build1_amd64.deb ... 115s Unpacking r-cran-stringi (1.8.4-1build1) ... 115s Selecting previously unselected package r-cran-stringr. 115s Preparing to unpack .../186-r-cran-stringr_1.5.1-1_all.deb ... 115s Unpacking r-cran-stringr (1.5.1-1) ... 115s Selecting previously unselected package r-cran-reshape2. 115s Preparing to unpack .../187-r-cran-reshape2_1.4.4-2build1_amd64.deb ... 115s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 115s Selecting previously unselected package r-cran-leidenbase. 115s Preparing to unpack .../188-r-cran-leidenbase_0.1.31-1_amd64.deb ... 115s Unpacking r-cran-leidenbase (0.1.31-1) ... 115s Selecting previously unselected package r-cran-generics. 115s Preparing to unpack .../189-r-cran-generics_0.1.3-1_all.deb ... 115s Unpacking r-cran-generics (0.1.3-1) ... 115s Selecting previously unselected package r-cran-tidyselect. 115s Preparing to unpack .../190-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ... 115s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 115s Selecting previously unselected package r-cran-dplyr. 115s Preparing to unpack .../191-r-cran-dplyr_1.1.4-4_amd64.deb ... 115s Unpacking r-cran-dplyr (1.1.4-4) ... 115s Selecting previously unselected package r-cran-pheatmap. 115s Preparing to unpack .../192-r-cran-pheatmap_1.0.12-2build1_all.deb ... 115s Unpacking r-cran-pheatmap (1.0.12-2build1) ... 115s Selecting previously unselected package r-cran-proxy. 115s Preparing to unpack .../193-r-cran-proxy_0.4-27-1_amd64.deb ... 115s Unpacking r-cran-proxy (0.4-27-1) ... 115s Selecting previously unselected package r-cran-slam. 115s Preparing to unpack .../194-r-cran-slam_0.1-55-1_amd64.deb ... 115s Unpacking r-cran-slam (0.1-55-1) ... 115s Selecting previously unselected package r-cran-gridextra. 115s Preparing to unpack .../195-r-cran-gridextra_2.3-3build1_all.deb ... 115s Unpacking r-cran-gridextra (2.3-3build1) ... 115s Selecting previously unselected package r-cran-viridis. 115s Preparing to unpack .../196-r-cran-viridis_0.6.5-1_all.deb ... 115s Unpacking r-cran-viridis (0.6.5-1) ... 115s Selecting previously unselected package r-cran-rann. 115s Preparing to unpack .../197-r-cran-rann_2.6.2-1_amd64.deb ... 115s Unpacking r-cran-rann (2.6.2-1) ... 115s Selecting previously unselected package r-bioc-monocle. 115s Preparing to unpack .../198-r-bioc-monocle_2.34.0-2_amd64.deb ... 115s Unpacking r-bioc-monocle (2.34.0-2) ... 115s Selecting previously unselected package r-cran-survival. 115s Preparing to unpack .../199-r-cran-survival_3.8-3-1_amd64.deb ... 115s Unpacking r-cran-survival (3.8-3-1) ... 116s Selecting previously unselected package r-bioc-multtest. 116s Preparing to unpack .../200-r-bioc-multtest_2.62.0-2_amd64.deb ... 116s Unpacking r-bioc-multtest (2.62.0-2) ... 116s Selecting previously unselected package r-cran-rjson. 116s Preparing to unpack .../201-r-cran-rjson_0.2.23-1_amd64.deb ... 116s Unpacking r-cran-rjson (0.2.23-1) ... 116s Selecting previously unselected package r-cran-yaml. 116s Preparing to unpack .../202-r-cran-yaml_2.3.10-1_amd64.deb ... 116s Unpacking r-cran-yaml (2.3.10-1) ... 116s Selecting previously unselected package r-cran-restfulr. 116s Preparing to unpack .../203-r-cran-restfulr_0.0.15-1_amd64.deb ... 116s Unpacking r-cran-restfulr (0.0.15-1) ... 116s Selecting previously unselected package r-bioc-rtracklayer. 116s Preparing to unpack .../204-r-bioc-rtracklayer_1.66.0-2_amd64.deb ... 116s Unpacking r-bioc-rtracklayer (1.66.0-2) ... 116s Selecting previously unselected package r-bioc-singlecellexperiment. 116s Preparing to unpack .../205-r-bioc-singlecellexperiment_1.28.1+ds-2_all.deb ... 116s Unpacking r-bioc-singlecellexperiment (1.28.1+ds-2) ... 116s Selecting previously unselected package r-cran-digest. 116s Preparing to unpack .../206-r-cran-digest_0.6.37-1_amd64.deb ... 116s Unpacking r-cran-digest (0.6.37-1) ... 116s Selecting previously unselected package r-cran-ape. 116s Preparing to unpack .../207-r-cran-ape_5.8-1-1_amd64.deb ... 116s Unpacking r-cran-ape (5.8-1-1) ... 116s Selecting previously unselected package r-cran-base64enc. 116s Preparing to unpack .../208-r-cran-base64enc_0.1-3-3_amd64.deb ... 116s Unpacking r-cran-base64enc (0.1-3-3) ... 116s Selecting previously unselected package r-cran-beeswarm. 116s Preparing to unpack .../209-r-cran-beeswarm_0.4.0-1_amd64.deb ... 116s Unpacking r-cran-beeswarm (0.4.0-1) ... 116s Selecting previously unselected package r-cran-bit. 116s Preparing to unpack .../210-r-cran-bit_4.0.5-1_amd64.deb ... 116s Unpacking r-cran-bit (4.0.5-1) ... 116s Selecting previously unselected package r-cran-bit64. 116s Preparing to unpack .../211-r-cran-bit64_4.0.5-1_amd64.deb ... 116s Unpacking r-cran-bit64 (4.0.5-1) ... 116s Selecting previously unselected package r-cran-brio. 116s Preparing to unpack .../212-r-cran-brio_1.1.5-1_amd64.deb ... 116s Unpacking r-cran-brio (1.1.5-1) ... 116s Selecting previously unselected package r-cran-fastmap. 116s Preparing to unpack .../213-r-cran-fastmap_1.2.0-1_amd64.deb ... 116s Unpacking r-cran-fastmap (1.2.0-1) ... 116s Selecting previously unselected package r-cran-cachem. 116s Preparing to unpack .../214-r-cran-cachem_1.1.0-1_amd64.deb ... 116s Unpacking r-cran-cachem (1.1.0-1) ... 116s Selecting previously unselected package r-cran-htmltools. 116s Preparing to unpack .../215-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 116s Unpacking r-cran-htmltools (0.5.8.1-1) ... 116s Selecting previously unselected package r-cran-jquerylib. 116s Preparing to unpack .../216-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 116s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 116s Selecting previously unselected package r-cran-memoise. 116s Preparing to unpack .../217-r-cran-memoise_2.0.1-1_all.deb ... 116s Unpacking r-cran-memoise (2.0.1-1) ... 117s Selecting previously unselected package r-cran-fs. 117s Preparing to unpack .../218-r-cran-fs_1.6.5+dfsg-1_amd64.deb ... 117s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 117s Selecting previously unselected package r-cran-rappdirs. 117s Preparing to unpack .../219-r-cran-rappdirs_0.3.3-1_amd64.deb ... 117s Unpacking r-cran-rappdirs (0.3.3-1) ... 117s Selecting previously unselected package r-cran-sass. 117s Preparing to unpack .../220-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 117s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 117s Selecting previously unselected package r-cran-bslib. 117s Preparing to unpack .../221-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 117s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 117s Selecting previously unselected package r-cran-cairo. 117s Preparing to unpack .../222-r-cran-cairo_1.6-2-1_amd64.deb ... 117s Unpacking r-cran-cairo (1.6-2-1) ... 117s Selecting previously unselected package r-cran-ps. 117s Preparing to unpack .../223-r-cran-ps_1.8.1-1_amd64.deb ... 117s Unpacking r-cran-ps (1.8.1-1) ... 117s Selecting previously unselected package r-cran-processx. 117s Preparing to unpack .../224-r-cran-processx_3.8.5-1_amd64.deb ... 117s Unpacking r-cran-processx (3.8.5-1) ... 117s Selecting previously unselected package r-cran-callr. 117s Preparing to unpack .../225-r-cran-callr_3.7.6-1_all.deb ... 117s Unpacking r-cran-callr (3.7.6-1) ... 117s Selecting previously unselected package r-cran-class. 117s Preparing to unpack .../226-r-cran-class_7.3-23-1_amd64.deb ... 117s Unpacking r-cran-class (7.3-23-1) ... 117s Selecting previously unselected package r-cran-e1071. 117s Preparing to unpack .../227-r-cran-e1071_1.7-16-1_amd64.deb ... 117s Unpacking r-cran-e1071 (1.7-16-1) ... 117s Selecting previously unselected package r-cran-iterators. 117s Preparing to unpack .../228-r-cran-iterators_1.0.14-1_all.deb ... 117s Unpacking r-cran-iterators (1.0.14-1) ... 117s Selecting previously unselected package r-cran-foreach. 117s Preparing to unpack .../229-r-cran-foreach_1.5.2-1_all.deb ... 117s Unpacking r-cran-foreach (1.5.2-1) ... 117s Selecting previously unselected package r-cran-data.table. 117s Preparing to unpack .../230-r-cran-data.table_1.16.4+dfsg-1_amd64.deb ... 117s Unpacking r-cran-data.table (1.16.4+dfsg-1) ... 117s Selecting previously unselected package r-cran-modelmetrics. 117s Preparing to unpack .../231-r-cran-modelmetrics_1.2.2.2-1build1_amd64.deb ... 117s Unpacking r-cran-modelmetrics (1.2.2.2-1build1) ... 117s Selecting previously unselected package r-cran-proc. 117s Preparing to unpack .../232-r-cran-proc_1.18.5-1_amd64.deb ... 117s Unpacking r-cran-proc (1.18.5-1) ... 117s Selecting previously unselected package r-cran-tzdb. 117s Preparing to unpack .../233-r-cran-tzdb_0.4.0-2_amd64.deb ... 117s Unpacking r-cran-tzdb (0.4.0-2) ... 118s Selecting previously unselected package r-cran-clock. 118s Preparing to unpack .../234-r-cran-clock_0.7.1-1_amd64.deb ... 118s Unpacking r-cran-clock (0.7.1-1) ... 118s Selecting previously unselected package r-cran-gower. 118s Preparing to unpack .../235-r-cran-gower_1.0.2-1_amd64.deb ... 118s Unpacking r-cran-gower (1.0.2-1) ... 118s Selecting previously unselected package r-cran-hardhat. 118s Preparing to unpack .../236-r-cran-hardhat_1.4.0+dfsg-1_all.deb ... 118s Unpacking r-cran-hardhat (1.4.0+dfsg-1) ... 118s Selecting previously unselected package r-cran-rpart. 118s Preparing to unpack .../237-r-cran-rpart_4.1.24-1_amd64.deb ... 118s Unpacking r-cran-rpart (4.1.24-1) ... 118s Selecting previously unselected package r-cran-nnet. 118s Preparing to unpack .../238-r-cran-nnet_7.3-20-1_amd64.deb ... 118s Unpacking r-cran-nnet (7.3-20-1) ... 118s Selecting previously unselected package r-cran-shape. 118s Preparing to unpack .../239-r-cran-shape_1.4.6.1-1_all.deb ... 118s Unpacking r-cran-shape (1.4.6.1-1) ... 118s Selecting previously unselected package r-cran-diagram. 118s Preparing to unpack .../240-r-cran-diagram_1.6.5-2_all.deb ... 118s Unpacking r-cran-diagram (1.6.5-2) ... 118s Selecting previously unselected package r-cran-kernsmooth. 118s Preparing to unpack .../241-r-cran-kernsmooth_2.23-26-1_amd64.deb ... 118s Unpacking r-cran-kernsmooth (2.23-26-1) ... 118s Selecting previously unselected package r-cran-globals. 118s Preparing to unpack .../242-r-cran-globals_0.16.3-1_all.deb ... 118s Unpacking r-cran-globals (0.16.3-1) ... 118s Selecting previously unselected package r-cran-listenv. 118s Preparing to unpack .../243-r-cran-listenv_0.9.1+dfsg-1_all.deb ... 118s Unpacking r-cran-listenv (0.9.1+dfsg-1) ... 118s Selecting previously unselected package r-cran-parallelly. 118s Preparing to unpack .../244-r-cran-parallelly_1.41.0-1_amd64.deb ... 118s Unpacking r-cran-parallelly (1.41.0-1) ... 118s Selecting previously unselected package r-cran-future. 118s Preparing to unpack .../245-r-cran-future_1.34.0+dfsg-1_all.deb ... 118s Unpacking r-cran-future (1.34.0+dfsg-1) ... 118s Selecting previously unselected package r-cran-future.apply. 118s Preparing to unpack .../246-r-cran-future.apply_1.11.3+dfsg-1_all.deb ... 118s Unpacking r-cran-future.apply (1.11.3+dfsg-1) ... 118s Selecting previously unselected package r-cran-numderiv. 118s Preparing to unpack .../247-r-cran-numderiv_2016.8-1.1-3_all.deb ... 118s Unpacking r-cran-numderiv (2016.8-1.1-3) ... 118s Selecting previously unselected package r-cran-progressr. 118s Preparing to unpack .../248-r-cran-progressr_0.15.1-1_all.deb ... 118s Unpacking r-cran-progressr (0.15.1-1) ... 118s Selecting previously unselected package r-cran-squarem. 118s Preparing to unpack .../249-r-cran-squarem_2021.1-1_all.deb ... 118s Unpacking r-cran-squarem (2021.1-1) ... 118s Selecting previously unselected package r-cran-lava. 118s Preparing to unpack .../250-r-cran-lava_1.7.3+dfsg-2_all.deb ... 118s Unpacking r-cran-lava (1.7.3+dfsg-2) ... 118s Selecting previously unselected package r-cran-prodlim. 119s Preparing to unpack .../251-r-cran-prodlim_2024.06.25-1_amd64.deb ... 119s Unpacking r-cran-prodlim (2024.06.25-1) ... 119s Selecting previously unselected package r-cran-ipred. 119s Preparing to unpack .../252-r-cran-ipred_0.9-15-1_amd64.deb ... 119s Unpacking r-cran-ipred (0.9-15-1) ... 119s Selecting previously unselected package r-cran-timechange. 119s Preparing to unpack .../253-r-cran-timechange_0.3.0-1_amd64.deb ... 119s Unpacking r-cran-timechange (0.3.0-1) ... 119s Selecting previously unselected package r-cran-lubridate. 119s Preparing to unpack .../254-r-cran-lubridate_1.9.4+dfsg-1_amd64.deb ... 119s Unpacking r-cran-lubridate (1.9.4+dfsg-1) ... 119s Selecting previously unselected package r-cran-purrr. 119s Preparing to unpack .../255-r-cran-purrr_1.0.2-1_amd64.deb ... 119s Unpacking r-cran-purrr (1.0.2-1) ... 119s Selecting previously unselected package r-cran-tidyr. 119s Preparing to unpack .../256-r-cran-tidyr_1.3.1-1_amd64.deb ... 119s Unpacking r-cran-tidyr (1.3.1-1) ... 119s Selecting previously unselected package r-cran-timedate. 119s Preparing to unpack .../257-r-cran-timedate_4041.110-1_amd64.deb ... 119s Unpacking r-cran-timedate (4041.110-1) ... 119s Selecting previously unselected package r-cran-recipes. 119s Preparing to unpack .../258-r-cran-recipes_1.1.0+dfsg-1_all.deb ... 119s Unpacking r-cran-recipes (1.1.0+dfsg-1) ... 119s Selecting previously unselected package r-cran-caret. 119s Preparing to unpack .../259-r-cran-caret_7.0-1+dfsg-1_amd64.deb ... 119s Unpacking r-cran-caret (7.0-1+dfsg-1) ... 119s Selecting previously unselected package r-cran-catools. 119s Preparing to unpack .../260-r-cran-catools_1.18.2-1_amd64.deb ... 119s Unpacking r-cran-catools (1.18.2-1) ... 119s Selecting previously unselected package r-cran-evaluate. 119s Preparing to unpack .../261-r-cran-evaluate_1.0.3-1_all.deb ... 119s Unpacking r-cran-evaluate (1.0.3-1) ... 119s Selecting previously unselected package r-cran-xfun. 119s Preparing to unpack .../262-r-cran-xfun_0.50+dfsg-1_amd64.deb ... 119s Unpacking r-cran-xfun (0.50+dfsg-1) ... 119s Selecting previously unselected package r-cran-highr. 119s Preparing to unpack .../263-r-cran-highr_0.11+dfsg-1_all.deb ... 119s Unpacking r-cran-highr (0.11+dfsg-1) ... 119s Selecting previously unselected package libjs-mathjax. 119s Preparing to unpack .../264-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 119s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 120s Selecting previously unselected package r-cran-knitr. 120s Preparing to unpack .../265-r-cran-knitr_1.49+dfsg-1_all.deb ... 120s Unpacking r-cran-knitr (1.49+dfsg-1) ... 120s Selecting previously unselected package r-cran-fontawesome. 120s Preparing to unpack .../266-r-cran-fontawesome_0.5.3-1_all.deb ... 120s Unpacking r-cran-fontawesome (0.5.3-1) ... 120s Selecting previously unselected package r-cran-tinytex. 120s Preparing to unpack .../267-r-cran-tinytex_0.54-1_all.deb ... 120s Unpacking r-cran-tinytex (0.54-1) ... 120s Selecting previously unselected package libjs-modernizr. 120s Preparing to unpack .../268-libjs-modernizr_3.13.0-0.1_all.deb ... 120s Unpacking libjs-modernizr (3.13.0-0.1) ... 120s Selecting previously unselected package r-cran-later. 120s Preparing to unpack .../269-r-cran-later_1.4.1+dfsg-1_amd64.deb ... 120s Unpacking r-cran-later (1.4.1+dfsg-1) ... 121s Selecting previously unselected package r-cran-promises. 121s Preparing to unpack .../270-r-cran-promises_1.3.2+dfsg-1_amd64.deb ... 121s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 121s Selecting previously unselected package r-cran-httpuv. 121s Preparing to unpack .../271-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 121s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 121s Selecting previously unselected package r-cran-xtable. 121s Preparing to unpack .../272-r-cran-xtable_1%3a1.8-4-2_all.deb ... 121s Unpacking r-cran-xtable (1:1.8-4-2) ... 121s Selecting previously unselected package r-cran-sourcetools. 121s Preparing to unpack .../273-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 121s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 121s Selecting previously unselected package r-cran-commonmark. 121s Preparing to unpack .../274-r-cran-commonmark_1.9.2-2_amd64.deb ... 121s Unpacking r-cran-commonmark (1.9.2-2) ... 121s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 121s Preparing to unpack .../275-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 121s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 121s Selecting previously unselected package r-cran-shiny. 121s Preparing to unpack .../276-r-cran-shiny_1.9.1+dfsg-1_all.deb ... 121s Unpacking r-cran-shiny (1.9.1+dfsg-1) ... 121s Selecting previously unselected package r-cran-rmarkdown. 121s Preparing to unpack .../277-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 121s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 121s Selecting previously unselected package r-cran-htmlwidgets. 121s Preparing to unpack .../278-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 121s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 121s Selecting previously unselected package r-cran-miniui. 121s Preparing to unpack .../279-r-cran-miniui_0.1.1.1-3build1_all.deb ... 121s Unpacking r-cran-miniui (0.1.1.1-3build1) ... 121s Selecting previously unselected package r-cran-shinyjs. 121s Preparing to unpack .../280-r-cran-shinyjs_2.1.0-1_all.deb ... 121s Unpacking r-cran-shinyjs (2.1.0-1) ... 121s Selecting previously unselected package r-cran-colourpicker. 121s Preparing to unpack .../281-r-cran-colourpicker_1.3.0+dfsg-1_all.deb ... 121s Unpacking r-cran-colourpicker (1.3.0+dfsg-1) ... 121s Selecting previously unselected package r-cran-conquer. 121s Preparing to unpack .../282-r-cran-conquer_1.3.3-1_amd64.deb ... 121s Unpacking r-cran-conquer (1.3.3-1) ... 121s Selecting previously unselected package r-cran-cowplot. 121s Preparing to unpack .../283-r-cran-cowplot_1.1.3+dfsg-1_all.deb ... 121s Unpacking r-cran-cowplot (1.1.3+dfsg-1) ... 122s Selecting previously unselected package r-cran-lazyeval. 122s Preparing to unpack .../284-r-cran-lazyeval_0.2.2-1build1_amd64.deb ... 122s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 122s Selecting previously unselected package r-cran-crosstalk. 122s Preparing to unpack .../285-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 122s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 122s Selecting previously unselected package r-cran-deldir. 122s Preparing to unpack .../286-r-cran-deldir_2.0-4-1build1_amd64.deb ... 122s Unpacking r-cran-deldir (2.0-4-1build1) ... 122s Selecting previously unselected package r-cran-deoptimr. 122s Preparing to unpack .../287-r-cran-deoptimr_1.1-3-1-1_all.deb ... 122s Unpacking r-cran-deoptimr (1.1-3-1-1) ... 122s Selecting previously unselected package r-cran-desc. 122s Preparing to unpack .../288-r-cran-desc_1.4.3-1_all.deb ... 122s Unpacking r-cran-desc (1.4.3-1) ... 122s Selecting previously unselected package r-cran-diffobj. 122s Preparing to unpack .../289-r-cran-diffobj_0.3.5-1_amd64.deb ... 122s Unpacking r-cran-diffobj (0.3.5-1) ... 122s Selecting previously unselected package r-cran-dotcall64. 122s Preparing to unpack .../290-r-cran-dotcall64_1.1-1-1_amd64.deb ... 122s Unpacking r-cran-dotcall64 (1.1-1-1) ... 122s Selecting previously unselected package r-cran-sitmo. 122s Preparing to unpack .../291-r-cran-sitmo_2.0.2-1_amd64.deb ... 122s Unpacking r-cran-sitmo (2.0.2-1) ... 122s Selecting previously unselected package r-cran-dqrng. 122s Preparing to unpack .../292-r-cran-dqrng_0.3.2+dfsg-1_amd64.deb ... 122s Unpacking r-cran-dqrng (0.3.2+dfsg-1) ... 122s Selecting previously unselected package r-cran-fastdummies. 122s Preparing to unpack .../293-r-cran-fastdummies_1.7.5-1_all.deb ... 122s Unpacking r-cran-fastdummies (1.7.5-1) ... 122s Selecting previously unselected package r-cran-fitdistrplus. 122s Preparing to unpack .../294-r-cran-fitdistrplus_1.2-2-1_all.deb ... 122s Unpacking r-cran-fitdistrplus (1.2-2-1) ... 122s Selecting previously unselected package r-cran-fnn. 122s Preparing to unpack .../295-r-cran-fnn_1.1.4.1-1_amd64.deb ... 122s Unpacking r-cran-fnn (1.1.4.1-1) ... 122s Selecting previously unselected package r-cran-gtools. 122s Preparing to unpack .../296-r-cran-gtools_3.9.5-1_amd64.deb ... 122s Unpacking r-cran-gtools (3.9.5-1) ... 122s Selecting previously unselected package r-cran-gdata. 122s Preparing to unpack .../297-r-cran-gdata_3.0.1-1_all.deb ... 122s Unpacking r-cran-gdata (3.0.1-1) ... 122s Selecting previously unselected package r-cran-vipor. 122s Preparing to unpack .../298-r-cran-vipor_0.4.7-1_all.deb ... 122s Unpacking r-cran-vipor (0.4.7-1) ... 123s Selecting previously unselected package r-cran-ggbeeswarm. 123s Preparing to unpack .../299-r-cran-ggbeeswarm_0.7.2-1_all.deb ... 123s Unpacking r-cran-ggbeeswarm (0.7.2-1) ... 123s Selecting previously unselected package r-cran-png. 123s Preparing to unpack .../300-r-cran-png_0.1-8-1build2_amd64.deb ... 123s Unpacking r-cran-png (0.1-8-1build2) ... 123s Selecting previously unselected package r-cran-systemfonts. 123s Preparing to unpack .../301-r-cran-systemfonts_1.2.1-1_amd64.deb ... 123s Unpacking r-cran-systemfonts (1.2.1-1) ... 123s Selecting previously unselected package r-cran-textshaping. 123s Preparing to unpack .../302-r-cran-textshaping_0.3.7-2_amd64.deb ... 123s Unpacking r-cran-textshaping (0.3.7-2) ... 123s Selecting previously unselected package r-cran-ragg. 123s Preparing to unpack .../303-r-cran-ragg_1.3.3-1_amd64.deb ... 123s Unpacking r-cran-ragg (1.3.3-1) ... 123s Selecting previously unselected package r-cran-ggrastr. 123s Preparing to unpack .../304-r-cran-ggrastr_1.0.2-1_all.deb ... 123s Unpacking r-cran-ggrastr (1.0.2-1) ... 123s Selecting previously unselected package r-cran-ggrepel. 123s Preparing to unpack .../305-r-cran-ggrepel_0.9.6-1_amd64.deb ... 123s Unpacking r-cran-ggrepel (0.9.6-1) ... 123s Selecting previously unselected package r-cran-ggridges. 123s Preparing to unpack .../306-r-cran-ggridges_0.5.6-1_all.deb ... 123s Unpacking r-cran-ggridges (0.5.6-1) ... 123s Selecting previously unselected package r-cran-goftest. 123s Preparing to unpack .../307-r-cran-goftest_1.2-3-1_amd64.deb ... 123s Unpacking r-cran-goftest (1.2-3-1) ... 123s Selecting previously unselected package r-cran-gplots. 123s Preparing to unpack .../308-r-cran-gplots_3.2.0-1_all.deb ... 123s Unpacking r-cran-gplots (3.2.0-1) ... 123s Selecting previously unselected package r-cran-hdf5r. 123s Preparing to unpack .../309-r-cran-hdf5r_1.3.12+dfsg-1_amd64.deb ... 123s Unpacking r-cran-hdf5r (1.3.12+dfsg-1) ... 123s Selecting previously unselected package r-cran-rprojroot. 123s Preparing to unpack .../310-r-cran-rprojroot_2.0.4-2_all.deb ... 123s Unpacking r-cran-rprojroot (2.0.4-2) ... 123s Selecting previously unselected package r-cran-here. 123s Preparing to unpack .../311-r-cran-here_1.0.1-2_all.deb ... 123s Unpacking r-cran-here (1.0.1-2) ... 123s Selecting previously unselected package r-cran-ica. 123s Preparing to unpack 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unselected package r-cran-r.methodss3. 126s Preparing to unpack .../346-r-cran-r.methodss3_1.8.2-1_all.deb ... 126s Unpacking r-cran-r.methodss3 (1.8.2-1) ... 126s Selecting previously unselected package r-cran-r.oo. 126s Preparing to unpack .../347-r-cran-r.oo_1.27.0-1_all.deb ... 126s Unpacking r-cran-r.oo (1.27.0-1) ... 126s Selecting previously unselected package r-cran-r.utils. 126s Preparing to unpack .../348-r-cran-r.utils_2.12.3-1_all.deb ... 126s Unpacking r-cran-r.utils (2.12.3-1) ... 126s Selecting previously unselected package r-cran-rcppannoy. 126s Preparing to unpack .../349-r-cran-rcppannoy_0.0.22-1_amd64.deb ... 126s Unpacking r-cran-rcppannoy (0.0.22-1) ... 126s Selecting previously unselected package r-cran-rcpphnsw. 126s Preparing to unpack .../350-r-cran-rcpphnsw_0.5.0+ds-1_amd64.deb ... 126s Unpacking r-cran-rcpphnsw (0.5.0+ds-1) ... 126s Selecting previously unselected package r-cran-rcppprogress. 126s Preparing to unpack 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(1.11-2) ... 131s Setting up r-bioc-rtracklayer (1.66.0-2) ... 131s Setting up r-bioc-singlecellexperiment (1.28.1+ds-2) ... 131s Setting up r-cran-plotly (4.10.4+dfsg-2) ... 131s Setting up r-cran-mixtools (2.0.0-1) ... 131s Setting up r-cran-seurat (5.0.1-1) ... 131s Processing triggers for man-db (2.13.0-1) ... 133s Processing triggers for install-info (7.1.1-1) ... 133s Processing triggers for libc-bin (2.40-4ubuntu1) ... 134s autopkgtest [19:27:02]: test run-unit-test: [----------------------- 134s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 134s BEGIN TEST testthat.R 134s 134s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 134s Copyright (C) 2024 The R Foundation for Statistical Computing 134s Platform: x86_64-pc-linux-gnu 134s 134s R is free software and comes with ABSOLUTELY NO WARRANTY. 134s You are welcome to redistribute it under certain conditions. 134s Type 'license()' or 'licence()' for distribution details. 134s 134s R is a collaborative project with many contributors. 134s Type 'contributors()' for more information and 134s 'citation()' on how to cite R or R packages in publications. 134s 134s Type 'demo()' for some demos, 'help()' for on-line help, or 134s 'help.start()' for an HTML browser interface to help. 134s Type 'q()' to quit R. 134s 134s > library(testthat) 134s > library(Seurat) 134s Loading required package: SeuratObject 134s Loading required package: sp 136s ‘SeuratObject’ was built under R 4.4.1 but the current version is 136s 4.4.2; it is recomended that you reinstall ‘SeuratObject’ as the ABI 136s for R may have changed 136s ‘SeuratObject’ was built with package ‘Matrix’ 1.7.0 but the current 136s version is 1.7.2; it is recomended that you reinstall ‘SeuratObject’ as 136s the ABI for ‘Matrix’ may have changed 136s 136s Attaching package: ‘SeuratObject’ 136s 136s The following objects are masked from ‘package:base’: 136s 136s intersect, t 136s 138s > # 138s > # # Run tests for 'v3' 138s > # message('Run tests for v3 assay') 138s > # options(Seurat.object.assay.version = 'v3') 138s > # test_check("Seurat") 138s > 138s > # Run tests for 'v5' 138s > message('Run tests for v5 assay') 138s Run tests for v5 assay 138s > options(Seurat.object.assay.version = 'v5') 138s > test_check("Seurat") 139s | | | 0% | |======================================================================| 100% 172s Performing log-normalization 172s 0% 10 20 30 40 50 60 70 80 90 100% 172s [----|----|----|----|----|----|----|----|----|----| 172s **************************************************| 172s Performing log-normalization 172s 0% 10 20 30 40 50 60 70 80 90 100% 172s [----|----|----|----|----|----|----|----|----|----| 172s **************************************************| 172s Calculating gene variances 172s 0% 10 20 30 40 50 60 70 80 90 100% 172s [----|----|----|----|----|----|----|----|----|----| 172s **************************************************| 172s Calculating feature variances of standardized and clipped values 172s 0% 10 20 30 40 50 60 70 80 90 100% 172s [----|----|----|----|----|----|----|----|----|----| 172s **************************************************| 172s Calculating gene variances 172s 0% 10 20 30 40 50 60 70 80 90 100% 172s [----|----|----|----|----|----|----|----|----|----| 172s **************************************************| 172s Calculating feature variances of standardized and clipped values 172s 0% 10 20 30 40 50 60 70 80 90 100% 172s [----|----|----|----|----|----|----|----|----|----| 172s **************************************************| 172s | | | 0% | |======================================================================| 100% 185s Performing log-normalization 185s 0% 10 20 30 40 50 60 70 80 90 100% 185s [----|----|----|----|----|----|----|----|----|----| 185s **************************************************| 185s Performing log-normalization 185s 0% 10 20 30 40 50 60 70 80 90 100% 185s [----|----|----|----|----|----|----|----|----|----| 185s **************************************************| 186s Performing log-normalization 186s 0% 10 20 30 40 50 60 70 80 90 100% 186s [----|----|----|----|----|----|----|----|----|----| 186s **************************************************| 195s Performing log-normalization 195s 0% 10 20 30 40 50 60 70 80 90 100% 195s [----|----|----|----|----|----|----|----|----|----| 195s **************************************************| 196s | | | 0% | |======================================================================| 100% 196s | | | 0% | |======================================================================| 100% 196s [ FAIL 0 | WARN 8 | SKIP 29 | PASS 542 ] 196s 196s ══ Skipped tests (29) ══════════════════════════════════════════════════════════ 197s • On CRAN (29): 'test_differential_expression.R:286:3', 197s 'test_differential_expression.R:328:3', 197s 'test_differential_expression.R:425:3', 'test_dimensional_reduction.R:55:3', 197s 'test_integratedata.R:111:3', 'test_integratedata.R:180:3', 197s 'test_integration.R:74:3', 'test_integration.R:105:3', 197s 'test_integration.R:136:3', 'test_integration.R:170:3', 197s 'test_integration.R:202:3', 'test_integration.R:234:3', 197s 'test_integration.R:264:3', 'test_integration.R:306:3', 197s 'test_integration.R:335:3', 'test_integration.R:365:3', 'test_objects.R:6:3', 197s 'test_preprocessing.R:140:3', 'test_preprocessing.R:158:3', 197s 'test_preprocessing.R:401:3', 'test_preprocessing.R:455:3', 197s 'test_preprocessing.R:477:3', 'test_read_mtx.R:4:3', 'test_read_mtx.R:18:3', 197s 'test_transferdata.R:65:3', 'test_transferdata.R:88:3', 197s 'test_transferdata.R:100:3', 'test_transferdata.R:112:3', 197s 'test_transferdata.R:128:3' 197s 197s [ FAIL 0 | WARN 8 | SKIP 29 | PASS 542 ] 197s > 197s > 197s > 197s autopkgtest [19:28:05]: test run-unit-test: -----------------------] 197s autopkgtest [19:28:05]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 197s run-unit-test PASS 198s autopkgtest [19:28:06]: test pkg-r-autopkgtest: preparing testbed 258s autopkgtest [19:29:06]: testbed dpkg architecture: amd64 258s autopkgtest [19:29:06]: testbed apt version: 2.9.18 258s autopkgtest [19:29:06]: @@@@@@@@@@@@@@@@@@@@ test bed setup 258s autopkgtest [19:29:06]: testbed release detected to be: plucky 259s autopkgtest [19:29:07]: updating testbed package index (apt update) 259s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [110 kB] 259s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 259s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 259s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 259s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.4 kB] 259s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [884 kB] 259s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB] 259s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [125 kB] 259s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [95.5 kB] 259s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [299 kB] 259s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [832 kB] 259s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [7208 B] 259s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [1328 B] 259s Fetched 2446 kB in 0s (7061 kB/s) 260s Reading package lists... 260s Reading package lists... 260s Building dependency tree... 260s Reading state information... 261s Calculating upgrade... 261s The following packages will be upgraded: 261s initramfs-tools initramfs-tools-bin initramfs-tools-core 261s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 261s Need to get 84.0 kB of archives. 261s After this operation, 9216 B of additional disk space will be used. 261s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools all 0.145ubuntu1 [7942 B] 261s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-core all 0.145ubuntu1 [51.2 kB] 261s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-bin amd64 0.145ubuntu1 [24.8 kB] 261s Fetched 84.0 kB in 0s (2757 kB/s) 261s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108876 files and directories currently installed.) 262s Preparing to unpack .../initramfs-tools_0.145ubuntu1_all.deb ... 262s Unpacking initramfs-tools (0.145ubuntu1) over (0.142ubuntu35) ... 262s Preparing to unpack .../initramfs-tools-core_0.145ubuntu1_all.deb ... 262s Unpacking initramfs-tools-core (0.145ubuntu1) over (0.142ubuntu35) ... 262s Preparing to unpack .../initramfs-tools-bin_0.145ubuntu1_amd64.deb ... 262s Unpacking initramfs-tools-bin (0.145ubuntu1) over (0.142ubuntu35) ... 262s Setting up initramfs-tools-bin (0.145ubuntu1) ... 262s Setting up initramfs-tools-core (0.145ubuntu1) ... 262s Setting up initramfs-tools (0.145ubuntu1) ... 262s update-initramfs: deferring update (trigger activated) 262s Processing triggers for man-db (2.13.0-1) ... 262s Processing triggers for initramfs-tools (0.145ubuntu1) ... 263s update-initramfs: Generating /boot/initrd.img-6.12.0-12-generic 263s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 272s Reading package lists... 272s Building dependency tree... 272s Reading state information... 273s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 273s autopkgtest [19:29:21]: upgrading testbed (apt dist-upgrade and autopurge) 273s Reading package lists... 273s Building dependency tree... 273s Reading state information... 273s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 273s Starting 2 pkgProblemResolver with broken count: 0 273s Done 274s Entering ResolveByKeep 274s 274s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 274s Reading package lists... 275s Building dependency tree... 275s Reading state information... 275s Starting pkgProblemResolver with broken count: 0 275s Starting 2 pkgProblemResolver with broken count: 0 275s Done 276s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 276s autopkgtest [19:29:24]: rebooting testbed after setup commands that affected boot 279s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 291s Reading package lists... 292s Building dependency tree... 292s Reading state information... 292s Starting pkgProblemResolver with broken count: 0 292s Starting 2 pkgProblemResolver with broken count: 0 292s Done 293s The following NEW packages will be installed: 293s build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu 293s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 293s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-14 293s g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 293s gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-14 293s gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools 293s javascript-common libamd3 libasan8 libblas-dev libblas3 libboost-dev 293s libboost1.83-dev libbz2-dev libcairo2 libcc1-0 libcolamd3 libdatrie1 293s libdeflate-dev libdeflate0 libfftw3-double3 libfontconfig1 libgcc-14-dev 293s libgfortran-14-dev libgfortran5 libglpk40 libgomp1 libgraphite2-3 293s libharfbuzz0b libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 293s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 293s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 293s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 293s libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js 293s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 293s libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 liblerc4 293s liblsan0 libltdl7 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev 293s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 293s libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 293s libpixman-1-0 libpkgconf3 libpng-dev libquadmath0 libreadline-dev 293s libsharpyuv0 libsm6 libstdc++-14-dev libsuitesparseconfig7 libtcl8.6 293s libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 293s libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 293s littler node-bootstrap-sass node-html5shiv node-normalize.css pandoc 293s pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 293s r-bioc-biobase r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 293s r-bioc-biostrings r-bioc-delayedarray r-bioc-deseq2 r-bioc-genomeinfodb 293s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicranges 293s r-bioc-iranges r-bioc-limma r-bioc-matrixgenerics r-bioc-multtest 293s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 293s r-bioc-s4vectors r-bioc-sparsearray r-bioc-summarizedexperiment 293s r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-ape 293s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-bitops r-cran-brio 293s r-cran-bslib r-cran-cachem r-cran-callr r-cran-caret r-cran-catools 293s r-cran-class r-cran-cli r-cran-clock r-cran-cluster r-cran-codetools 293s r-cran-colorspace r-cran-colourpicker r-cran-commonmark r-cran-conquer 293s r-cran-cowplot r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl 293s r-cran-data.table r-cran-deldir r-cran-deoptimr r-cran-desc r-cran-diagram 293s r-cran-diffobj r-cran-digest r-cran-dotcall64 r-cran-dplyr r-cran-dqrng 293s r-cran-e1071 r-cran-evaluate r-cran-fansi r-cran-farver r-cran-fastdummies 293s r-cran-fastmap r-cran-fitdistrplus r-cran-fnn r-cran-fontawesome 293s r-cran-foreach r-cran-formatr r-cran-fs r-cran-futile.logger 293s r-cran-futile.options r-cran-future r-cran-future.apply r-cran-gdata 293s r-cran-generics r-cran-ggplot2 r-cran-ggrepel r-cran-ggridges r-cran-globals 293s r-cran-glue r-cran-goftest r-cran-gower r-cran-gplots r-cran-gridextra 293s r-cran-gtable r-cran-gtools r-cran-hardhat r-cran-here r-cran-highr 293s r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-ica 293s r-cran-igraph r-cran-ipred r-cran-irlba r-cran-isoband r-cran-iterators 293s r-cran-jquerylib r-cran-jsonlite r-cran-kernlab r-cran-kernsmooth 293s r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later r-cran-lattice 293s r-cran-lava r-cran-lazyeval r-cran-leiden r-cran-lifecycle r-cran-listenv 293s r-cran-littler r-cran-lmtest r-cran-locfit r-cran-lubridate r-cran-magrittr 293s r-cran-mass r-cran-mathjaxr r-cran-matrix r-cran-matrixmodels 293s r-cran-matrixstats r-cran-memoise r-cran-metap r-cran-mgcv r-cran-mime 293s r-cran-miniui r-cran-mixtools r-cran-mnormt r-cran-modelmetrics 293s r-cran-multcomp r-cran-munsell r-cran-mutoss r-cran-mvtnorm r-cran-nlme 293s r-cran-nnet r-cran-numderiv r-cran-openssl r-cran-parallelly 293s r-cran-patchwork r-cran-pbapply r-cran-pillar r-cran-pkgbuild 293s r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plotly 293s r-cran-plotrix r-cran-plyr r-cran-png r-cran-polyclip r-cran-praise 293s r-cran-proc r-cran-processx r-cran-prodlim r-cran-progressr r-cran-promises 293s r-cran-proxy r-cran-ps r-cran-purrr r-cran-qqconf r-cran-quantreg 293s r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils r-cran-r6 r-cran-rann 293s r-cran-rappdirs r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp 293s r-cran-rcppannoy r-cran-rcpparmadillo r-cran-rcppeigen r-cran-rcpphnsw 293s r-cran-rcppprogress r-cran-rcpptoml r-cran-rcurl r-cran-rdpack 293s r-cran-recipes r-cran-reshape2 r-cran-restfulr r-cran-reticulate 293s r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-robustbase r-cran-rocr 293s r-cran-rpart r-cran-rprojroot r-cran-rspectra r-cran-rsvd r-cran-rtsne 293s r-cran-sandwich r-cran-sass r-cran-scales r-cran-scattermore 293s r-cran-sctransform r-cran-segmented r-cran-seurat r-cran-seuratobject 293s r-cran-shape r-cran-shiny r-cran-shinyjs r-cran-sitmo r-cran-sn r-cran-snow 293s r-cran-sourcetools r-cran-sp r-cran-spam r-cran-sparsem r-cran-spatstat.data 293s r-cran-spatstat.explore r-cran-spatstat.geom r-cran-spatstat.random 293s r-cran-spatstat.sparse r-cran-spatstat.utils r-cran-squarem r-cran-statmod 293s r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys r-cran-tensor 293s r-cran-testthat r-cran-tfisher r-cran-th.data r-cran-tibble r-cran-tidyr 293s r-cran-tidyselect r-cran-timechange r-cran-timedate r-cran-tinytex 293s r-cran-tzdb r-cran-utf8 r-cran-uwot r-cran-vctrs r-cran-vgam 293s r-cran-viridislite r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml 293s r-cran-xtable r-cran-yaml r-cran-zoo unzip x11-common xdg-utils zip 293s zlib1g-dev 293s 0 upgraded, 386 newly installed, 0 to remove and 0 not upgraded. 293s Need to get 458 MB of archives. 293s After this operation, 1320 MB of additional disk space will be used. 293s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 293s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 293s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-13ubuntu1 [11.9 MB] 293s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-13ubuntu1 [1032 B] 293s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [5452 B] 293s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.1.0-2ubuntu1 [22.4 kB] 293s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 14.2.0-13ubuntu1 [47.6 kB] 293s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-13ubuntu1 [148 kB] 293s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 14.2.0-13ubuntu1 [29.1 kB] 293s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 14.2.0-13ubuntu1 [2998 kB] 293s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 14.2.0-13ubuntu1 [1317 kB] 293s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 14.2.0-13ubuntu1 [2732 kB] 294s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 14.2.0-13ubuntu1 [1177 kB] 294s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 14.2.0-13ubuntu1 [1634 kB] 294s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 14.2.0-13ubuntu1 [153 kB] 294s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-13ubuntu1 [2815 kB] 294s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-13ubuntu1 [23.4 MB] 294s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-13ubuntu1 [534 kB] 294s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1214 B] 294s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.1.0-2ubuntu1 [5000 B] 294s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-13ubuntu1 [2508 kB] 294s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-13ubuntu1 [13.3 MB] 294s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-13ubuntu1 [21.1 kB] 294s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [966 B] 294s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.1.0-2ubuntu1 [1100 B] 294s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 294s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 dctrl-tools amd64 2.24-3build3 [106 kB] 294s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 294s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 294s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB] 294s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB] 294s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB] 294s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 294s Get:34 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 294s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 294s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-13ubuntu1 [909 kB] 294s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran-14-dev amd64 14.2.0-13ubuntu1 [965 kB] 294s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-13ubuntu1 [12.5 MB] 294s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14 amd64 14.2.0-13ubuntu1 [13.2 kB] 294s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1022 B] 294s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran amd64 4:14.1.0-2ubuntu1 [1172 B] 294s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 icu-devtools amd64 76.1-1ubuntu2 [237 kB] 294s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 11+nmu1 [5936 B] 294s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libsuitesparseconfig7 amd64 1:7.8.3+dfsg-2 [13.4 kB] 294s Get:45 http://ftpmaster.internal/ubuntu plucky/universe amd64 libamd3 amd64 1:7.8.3+dfsg-2 [31.1 kB] 294s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-4 [332 kB] 294s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas-dev amd64 3.12.0-4 [307 kB] 294s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost1.83-dev amd64 1.83.0-4ubuntu2 [10.7 MB] 295s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost-dev amd64 1.83.0.2ubuntu1 [4468 B] 295s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libbz2-dev amd64 1.0.8-6 [33.8 kB] 295s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 295s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 295s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 295s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 295s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 295s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libcolamd3 amd64 1:7.8.3+dfsg-2 [19.5 kB] 295s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 295s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB] 295s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate-dev amd64 1.23-1 [71.7 kB] 295s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libfftw3-double3 amd64 3.3.10-2fakesync1build1 [839 kB] 295s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl7 amd64 2.5.4-2.1 [46.1 kB] 295s Get:62 http://ftpmaster.internal/ubuntu plucky/universe amd64 libglpk40 amd64 5.0-1build2 [369 kB] 295s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 295s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB] 295s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 295s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 295s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libicu-dev amd64 76.1-1ubuntu2 [12.6 MB] 295s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 295s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8-dev amd64 2.1.5-3ubuntu2 [324 kB] 295s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 295s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 295s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 295s Get:73 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 295s Get:74 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 295s Get:75 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 295s Get:76 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 295s Get:77 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 295s Get:78 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 295s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 295s Get:80 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 295s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 295s Get:82 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 295s Get:83 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 295s Get:84 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 295s Get:85 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 295s Get:86 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 295s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-4 [3177 kB] 295s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack-dev amd64 3.12.0-4 [6486 kB] 295s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 295s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 liblua5.4-0 amd64 5.4.7-1 [196 kB] 295s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses-dev amd64 6.5-2 [384 kB] 295s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 295s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 295s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.56.1-1 [255 kB] 295s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.56.1-1 [52.6 kB] 295s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.56.1-1 [29.1 kB] 295s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB] 295s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB] 295s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.42-4ubuntu3 [214 kB] 295s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-32-0 amd64 10.42-4ubuntu3 [201 kB] 295s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-posix3 amd64 10.42-4ubuntu3 [6768 B] 295s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-dev amd64 10.42-4ubuntu3 [747 kB] 295s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 libpkgconf3 amd64 1.8.1-4 [32.3 kB] 295s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 295s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 libpng-dev amd64 1.6.44-3 [300 kB] 295s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libreadline-dev amd64 8.2-6 [184 kB] 295s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 295s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 295s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB] 295s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 295s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 295s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 295s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 295s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 295s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB] 295s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 295s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu2 [185 kB] 295s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 295s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 295s Get:120 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.2-1build1 [28.9 MB] 295s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-2 [96.6 kB] 295s Get:122 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-2 [2554 B] 295s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 295s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 295s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 295s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 295s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc amd64 3.1.11.1+ds-2 [27.2 MB] 296s Get:128 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma-dev amd64 5.6.3-1 [189 kB] 296s Get:129 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf-bin amd64 1.8.1-4 [21.6 kB] 296s Get:130 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf amd64 1.8.1-4 [16.8 kB] 296s Get:131 http://ftpmaster.internal/ubuntu plucky/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3 [193 kB] 296s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-dev all 4.4.2-1build1 [4342 B] 296s Get:133 http://ftpmaster.internal/ubuntu plucky/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 296s Get:134 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 296s Get:135 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biobase amd64 2.66.0-2 [2332 kB] 296s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2065 kB] 296s Get:137 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 296s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-formatr all 1.14-2 [152 kB] 296s Get:139 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 296s Get:140 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 296s Get:141 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 296s Get:142 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 296s Get:143 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-codetools all 0.2-20-1 [90.5 kB] 296s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bh all 1.84.0-1 [5962 B] 296s Get:145 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cpp11 all 0.5.1-1 [233 kB] 296s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocparallel amd64 1.40.0-2 [1337 kB] 296s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-iranges amd64 2.40.1-2 [2310 kB] 296s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 296s Get:149 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-xvector amd64 0.46.0-2 [620 kB] 296s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-curl amd64 6.1.0+dfsg-1 [195 kB] 296s Get:151 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.8.9+dfsg-1 [445 kB] 296s Get:152 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 296s Get:153 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB] 296s Get:154 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB] 296s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-openssl amd64 2.2.0+dfsg-1 [405 kB] 296s Get:156 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB] 296s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 296s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 296s Get:159 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 296s Get:160 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodb all 1.42.1+dfsg-2 [3883 kB] 296s Get:161 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB] 296s Get:162 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biostrings amd64 2.74.1+dfsg-2 [13.3 MB] 296s Get:163 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 296s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrix amd64 1.7-2-1 [4456 kB] 296s Get:165 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixstats amd64 1.5.0-1 [542 kB] 296s Get:166 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 296s Get:167 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-abind all 1.4-8-1 [66.9 kB] 296s Get:168 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-s4arrays amd64 1.6.0+dfsg-2 [698 kB] 296s Get:169 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-sparsearray amd64 1.6.1+dfsg-1 [1391 kB] 296s Get:170 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-delayedarray amd64 0.32.0+dfsg-2 [2064 kB] 296s Get:171 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomicranges amd64 1.58.0+dfsg-2 [2083 kB] 296s Get:172 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 296s Get:173 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-locfit amd64 1.5-9.10-1 [518 kB] 296s Get:174 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.3-1 [1348 kB] 296s Get:175 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 296s Get:176 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.5-1 [1719 kB] 296s Get:177 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 296s Get:178 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 296s Get:179 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 297s Get:180 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mass amd64 7.3-64-1 [1114 kB] 297s Get:181 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nlme amd64 3.1.167-1 [2320 kB] 297s Get:182 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB] 297s Get:183 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB] 297s Get:184 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 297s Get:185 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colorspace amd64 2.1-1+dfsg-1 [1563 kB] 297s Get:186 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-munsell all 0.5.1-1 [213 kB] 297s Get:187 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 297s Get:188 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridislite all 0.4.2-2 [1088 kB] 297s Get:189 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scales all 1.3.0-1 [603 kB] 297s Get:190 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 297s Get:191 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 297s Get:192 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 297s Get:193 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 297s Get:194 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 297s Get:195 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 297s Get:196 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB] 297s Get:197 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 297s Get:198 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 297s Get:199 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 297s Get:200 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.14-1 [1998 kB] 297s Get:201 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpparmadillo amd64 14.2.2-1-1 [864 kB] 297s Get:202 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-deseq2 amd64 1.46.0+dfsg-2 [1250 kB] 297s Get:203 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bitops amd64 1.0-9-1 [30.3 kB] 297s Get:204 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rhtslib amd64 3.2.0+dfsg-2 [1499 kB] 297s Get:205 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rsamtools amd64 2.22.0+dfsg-2 [3745 kB] 297s Get:206 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomicalignments amd64 1.42.0-2 [2165 kB] 297s Get:207 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-statmod amd64 1.5.0-1 [295 kB] 297s Get:208 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-limma amd64 3.62.2+dfsg-1 [1969 kB] 297s Get:209 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-survival amd64 3.8-3-1 [8239 kB] 297s Get:210 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-multtest amd64 2.62.0-2 [844 kB] 297s Get:211 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xml amd64 3.99-0.18-1 [1748 kB] 297s Get:212 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcurl amd64 1.98-1.16+dfsg-1 [807 kB] 297s Get:213 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rjson amd64 0.2.23-1 [104 kB] 297s Get:214 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB] 297s Get:215 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-restfulr amd64 0.0.15-1 [380 kB] 297s Get:216 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rtracklayer amd64 1.66.0-2 [5227 kB] 297s Get:217 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB] 297s Get:218 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ape amd64 5.8-1-1 [2918 kB] 297s Get:219 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 297s Get:220 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 297s Get:221 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 297s Get:222 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 297s Get:223 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 297s Get:224 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 297s Get:225 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 297s Get:226 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB] 297s Get:227 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 297s Get:228 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 297s Get:229 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 297s Get:230 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ps amd64 1.8.1-1 [397 kB] 297s Get:231 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-processx amd64 3.8.5-1 [356 kB] 297s Get:232 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 297s Get:233 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-class amd64 7.3-23-1 [92.7 kB] 297s Get:234 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB] 297s Get:235 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-e1071 amd64 1.7-16-1 [565 kB] 297s Get:236 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-iterators all 1.0.14-1 [336 kB] 297s Get:237 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-foreach all 1.5.2-1 [124 kB] 297s Get:238 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-data.table amd64 1.16.4+dfsg-1 [2032 kB] 297s Get:239 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-modelmetrics amd64 1.2.2.2-1build1 [128 kB] 297s Get:240 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB] 297s Get:241 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proc amd64 1.18.5-1 [966 kB] 297s Get:242 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB] 297s Get:243 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB] 297s Get:244 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB] 297s Get:245 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tzdb amd64 0.4.0-2 [521 kB] 297s Get:246 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-clock amd64 0.7.1-1 [1804 kB] 297s Get:247 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gower amd64 1.0.2-1 [210 kB] 297s Get:248 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-hardhat all 1.4.0+dfsg-1 [565 kB] 297s Get:249 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rpart amd64 4.1.24-1 [670 kB] 297s Get:250 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nnet amd64 7.3-20-1 [116 kB] 297s Get:251 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shape all 1.4.6.1-1 [749 kB] 297s Get:252 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diagram all 1.6.5-2 [656 kB] 297s Get:253 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernsmooth amd64 2.23-26-1 [94.5 kB] 297s Get:254 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-globals all 0.16.3-1 [120 kB] 297s Get:255 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-listenv all 0.9.1+dfsg-1 [112 kB] 297s Get:256 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-parallelly amd64 1.41.0-1 [507 kB] 297s Get:257 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-future all 1.34.0+dfsg-1 [646 kB] 297s Get:258 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-future.apply all 1.11.3+dfsg-1 [175 kB] 297s Get:259 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-numderiv all 2016.8-1.1-3 [115 kB] 297s Get:260 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-progressr all 0.15.1-1 [353 kB] 297s Get:261 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-squarem all 2021.1-1 [179 kB] 297s Get:262 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lava all 1.7.3+dfsg-2 [2156 kB] 297s Get:263 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-prodlim amd64 2024.06.25-1 [415 kB] 297s Get:264 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ipred amd64 0.9-15-1 [386 kB] 297s Get:265 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-timechange amd64 0.3.0-1 [178 kB] 297s Get:266 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lubridate amd64 1.9.4+dfsg-1 [1009 kB] 297s Get:267 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-purrr amd64 1.0.2-1 [502 kB] 297s Get:268 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringi amd64 1.8.4-1build1 [927 kB] 297s Get:269 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 297s Get:270 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 297s Get:271 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-timedate amd64 4041.110-1 [1208 kB] 297s Get:272 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-recipes all 1.1.0+dfsg-1 [2035 kB] 297s Get:273 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reshape2 amd64 1.4.4-2build1 [114 kB] 297s Get:274 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-caret amd64 7.0-1+dfsg-1 [3460 kB] 297s Get:275 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-catools amd64 1.18.2-1 [201 kB] 297s Get:276 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cluster amd64 2.1.8-1 [579 kB] 297s Get:277 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 1.0.3-1 [114 kB] 297s Get:278 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xfun amd64 0.50+dfsg-1 [568 kB] 297s Get:279 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 297s Get:280 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 297s Get:281 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 297s Get:282 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 297s Get:283 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tinytex all 0.54-1 [147 kB] 297s Get:284 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-modernizr all 3.13.0-0.1 [101 kB] 297s Get:285 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB] 297s Get:286 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB] 297s Get:287 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 297s Get:288 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 297s Get:289 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 297s Get:290 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.2-2 [137 kB] 297s Get:291 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 297s Get:292 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.9.1+dfsg-1 [3111 kB] 297s Get:293 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 297s Get:294 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 297s Get:295 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-miniui all 0.1.1.1-3build1 [36.1 kB] 297s Get:296 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shinyjs all 2.1.0-1 [967 kB] 297s Get:297 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colourpicker all 1.3.0+dfsg-1 [1191 kB] 297s Get:298 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-conquer amd64 1.3.3-1 [499 kB] 297s Get:299 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cowplot all 1.1.3+dfsg-1 [614 kB] 297s Get:300 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lazyeval amd64 0.2.2-1build1 [144 kB] 297s Get:301 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 297s Get:302 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-deldir amd64 2.0-4-1build1 [270 kB] 297s Get:303 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-deoptimr all 1.1-3-1-1 [76.6 kB] 297s Get:304 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 297s Get:305 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 298s Get:306 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dotcall64 amd64 1.1-1-1 [38.1 kB] 298s Get:307 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sitmo amd64 2.0.2-1 [130 kB] 298s Get:308 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dqrng amd64 0.3.2+dfsg-1 [161 kB] 298s Get:309 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastdummies all 1.7.5-1 [51.1 kB] 298s Get:310 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fitdistrplus all 1.2-2-1 [2287 kB] 298s Get:311 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fnn amd64 1.1.4.1-1 [126 kB] 298s Get:312 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtools amd64 3.9.5-1 [340 kB] 298s Get:313 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gdata all 3.0.1-1 [491 kB] 298s Get:314 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggrepel amd64 0.9.6-1 [270 kB] 298s Get:315 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggridges all 0.5.6-1 [2195 kB] 298s Get:316 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-goftest amd64 1.2-3-1 [59.5 kB] 298s Get:317 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gplots all 3.2.0-1 [484 kB] 298s Get:318 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gridextra all 2.3-3build1 [1024 kB] 298s Get:319 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rprojroot all 2.0.4-2 [125 kB] 298s Get:320 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-here all 1.0.1-2 [50.3 kB] 298s Get:321 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ica all 1.0-3-1 [85.4 kB] 298s Get:322 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-igraph amd64 2.1.4-1 [5357 kB] 298s Get:323 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-irlba amd64 2.3.5.1-4 [295 kB] 298s Get:324 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernlab amd64 0.9-33-1 [1947 kB] 298s Get:325 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpptoml amd64 0.2.2+dfsg-1 [110 kB] 298s Get:326 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-png amd64 0.1-8-1build2 [40.6 kB] 298s Get:327 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reticulate amd64 1.39.0+dfsg-1 [1238 kB] 298s Get:328 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-leiden all 0.4.3.1+dfsg-1 [71.9 kB] 298s Get:329 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-zoo amd64 1.8-12-2 [984 kB] 298s Get:330 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lmtest amd64 0.9.40-1 [396 kB] 298s Get:331 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mathjaxr all 1.6-0-1 [605 kB] 298s Get:332 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixmodels all 0.5-3-1 [361 kB] 298s Get:333 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rbibutils amd64 2.3-1 [1023 kB] 298s Get:334 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rdpack all 2.6.2-1 [757 kB] 298s Get:335 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mnormt amd64 2.1.1-2 [170 kB] 298s Get:336 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sparsem amd64 1.84-2-1 [813 kB] 298s Get:337 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-quantreg amd64 6.00-1 [1454 kB] 298s Get:338 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sn all 2.1.1-2 [1815 kB] 298s Get:339 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mvtnorm amd64 1.3-3-1 [923 kB] 298s Get:340 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tfisher all 0.2.0-3 [79.8 kB] 298s Get:341 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plotrix all 3.8-4-1 [1120 kB] 298s Get:342 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-th.data all 1.1-3-1 [8723 kB] 298s Get:343 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sandwich all 3.1-1-1 [1483 kB] 298s Get:344 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-multcomp all 1.4-28-1 [700 kB] 298s Get:345 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mutoss all 0.1-13-1 [1123 kB] 298s Get:346 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-robustbase amd64 0.99-4-1-1 [3038 kB] 298s Get:347 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-qqconf amd64 1.3.2+dfsg-1 [157 kB] 298s Get:348 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-metap all 1.11-2 [570 kB] 298s Get:349 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plotly all 4.10.4+dfsg-2 [3666 kB] 298s Get:350 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-segmented all 2.1-3-1 [1366 kB] 298s Get:351 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mixtools amd64 2.0.0-1 [1399 kB] 298s Get:352 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-patchwork all 1.3.0-1 [3220 kB] 298s Get:353 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pbapply all 1.7-2-1 [102 kB] 298s Get:354 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgbuild all 1.4.6-1 [213 kB] 298s Get:355 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgload all 1.4.0-1 [247 kB] 298s Get:356 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-polyclip amd64 1.10-7-1 [116 kB] 298s Get:357 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 298s Get:358 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 298s Get:359 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.oo all 1.27.0-1 [979 kB] 298s Get:360 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.utils all 2.12.3-1 [1386 kB] 298s Get:361 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rann amd64 2.6.2-1 [46.3 kB] 298s Get:362 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppannoy amd64 0.0.22-1 [235 kB] 298s Get:363 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1428 kB] 298s Get:364 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpphnsw amd64 0.5.0+ds-1 [171 kB] 298s Get:365 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppprogress all 0.4.2-2build1 [22.0 kB] 298s Get:366 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rocr all 1.0-11-3 [456 kB] 298s Get:367 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rspectra amd64 0.16-2-1 [448 kB] 298s Get:368 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rsvd all 1.0.5-1 [3589 kB] 298s Get:369 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rtsne amd64 0.17-1 [109 kB] 298s Get:370 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scattermore amd64 1.2-1 [331 kB] 298s Get:371 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sctransform amd64 0.4.1-1 [504 kB] 298s Get:372 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sp amd64 1:2.1-4+dfsg-1 [1472 kB] 298s Get:373 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spam amd64 2.11-1-1 [2756 kB] 298s Get:374 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-seuratobject amd64 5.0.2-1 [1744 kB] 298s Get:375 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.utils amd64 3.1-2-1 [383 kB] 298s Get:376 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.data all 3.1-4-1 [4047 kB] 298s Get:377 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.geom amd64 3.2-9-2 [3946 kB] 298s Get:378 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.random amd64 3.2-3-1 [1169 kB] 298s Get:379 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tensor all 1.5-4 [15.7 kB] 298s Get:380 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.sparse amd64 3.1-0-1 [221 kB] 298s Get:381 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.explore amd64 3.2-7-1 [3432 kB] 298s Get:382 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-uwot amd64 0.2.2-2 [1044 kB] 298s Get:383 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-seurat amd64 5.0.1-1 [3543 kB] 298s Get:384 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-waldo all 0.6.1-1 [150 kB] 298s Get:385 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-testthat amd64 3.2.3-1 [1651 kB] 298s Get:386 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vgam amd64 1.1-12-1 [7658 kB] 299s Preconfiguring packages ... 299s Fetched 458 MB in 6s (81.1 MB/s) 299s Selecting previously unselected package libisl23:amd64. 300s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108876 files and directories currently installed.) 300s Preparing to unpack .../000-libisl23_0.27-1_amd64.deb ... 300s Unpacking libisl23:amd64 (0.27-1) ... 300s Selecting previously unselected package libmpc3:amd64. 300s Preparing to unpack .../001-libmpc3_1.3.1-1build2_amd64.deb ... 300s Unpacking libmpc3:amd64 (1.3.1-1build2) ... 300s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 300s Preparing to unpack .../002-cpp-14-x86-64-linux-gnu_14.2.0-13ubuntu1_amd64.deb ... 300s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-13ubuntu1) ... 300s Selecting previously unselected package cpp-14. 300s Preparing to unpack .../003-cpp-14_14.2.0-13ubuntu1_amd64.deb ... 300s Unpacking cpp-14 (14.2.0-13ubuntu1) ... 300s Selecting previously unselected package cpp-x86-64-linux-gnu. 300s Preparing to unpack .../004-cpp-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 300s Unpacking cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 300s Selecting previously unselected package cpp. 300s Preparing to unpack .../005-cpp_4%3a14.1.0-2ubuntu1_amd64.deb ... 300s Unpacking cpp (4:14.1.0-2ubuntu1) ... 300s Selecting previously unselected package libcc1-0:amd64. 300s Preparing to unpack .../006-libcc1-0_14.2.0-13ubuntu1_amd64.deb ... 300s Unpacking libcc1-0:amd64 (14.2.0-13ubuntu1) ... 300s Selecting previously unselected package libgomp1:amd64. 300s Preparing to unpack .../007-libgomp1_14.2.0-13ubuntu1_amd64.deb ... 300s Unpacking libgomp1:amd64 (14.2.0-13ubuntu1) ... 300s Selecting previously unselected package libitm1:amd64. 300s Preparing to unpack .../008-libitm1_14.2.0-13ubuntu1_amd64.deb ... 300s Unpacking libitm1:amd64 (14.2.0-13ubuntu1) ... 300s Selecting previously unselected package libasan8:amd64. 300s Preparing to unpack .../009-libasan8_14.2.0-13ubuntu1_amd64.deb ... 300s Unpacking libasan8:amd64 (14.2.0-13ubuntu1) ... 300s Selecting previously unselected package liblsan0:amd64. 300s Preparing to unpack .../010-liblsan0_14.2.0-13ubuntu1_amd64.deb ... 300s Unpacking liblsan0:amd64 (14.2.0-13ubuntu1) ... 300s Selecting previously unselected package libtsan2:amd64. 300s Preparing to unpack .../011-libtsan2_14.2.0-13ubuntu1_amd64.deb ... 300s Unpacking libtsan2:amd64 (14.2.0-13ubuntu1) ... 300s Selecting previously unselected package libubsan1:amd64. 300s Preparing to unpack .../012-libubsan1_14.2.0-13ubuntu1_amd64.deb ... 300s Unpacking libubsan1:amd64 (14.2.0-13ubuntu1) ... 300s Selecting previously unselected package libhwasan0:amd64. 300s Preparing to unpack .../013-libhwasan0_14.2.0-13ubuntu1_amd64.deb ... 300s Unpacking libhwasan0:amd64 (14.2.0-13ubuntu1) ... 300s Selecting previously unselected package libquadmath0:amd64. 300s Preparing to unpack .../014-libquadmath0_14.2.0-13ubuntu1_amd64.deb ... 300s Unpacking libquadmath0:amd64 (14.2.0-13ubuntu1) ... 300s Selecting previously unselected package libgcc-14-dev:amd64. 300s Preparing to unpack .../015-libgcc-14-dev_14.2.0-13ubuntu1_amd64.deb ... 300s Unpacking libgcc-14-dev:amd64 (14.2.0-13ubuntu1) ... 301s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 301s Preparing to unpack .../016-gcc-14-x86-64-linux-gnu_14.2.0-13ubuntu1_amd64.deb ... 301s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-13ubuntu1) ... 301s Selecting previously unselected package gcc-14. 301s Preparing to unpack .../017-gcc-14_14.2.0-13ubuntu1_amd64.deb ... 301s Unpacking gcc-14 (14.2.0-13ubuntu1) ... 301s Selecting previously unselected package gcc-x86-64-linux-gnu. 301s Preparing to unpack .../018-gcc-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 301s Unpacking gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 301s Selecting previously unselected package gcc. 301s Preparing to unpack .../019-gcc_4%3a14.1.0-2ubuntu1_amd64.deb ... 301s Unpacking gcc (4:14.1.0-2ubuntu1) ... 301s Selecting previously unselected package libstdc++-14-dev:amd64. 301s Preparing to unpack .../020-libstdc++-14-dev_14.2.0-13ubuntu1_amd64.deb ... 301s Unpacking libstdc++-14-dev:amd64 (14.2.0-13ubuntu1) ... 301s Selecting previously unselected package g++-14-x86-64-linux-gnu. 301s Preparing to unpack .../021-g++-14-x86-64-linux-gnu_14.2.0-13ubuntu1_amd64.deb ... 301s Unpacking g++-14-x86-64-linux-gnu (14.2.0-13ubuntu1) ... 301s Selecting previously unselected package g++-14. 301s Preparing to unpack .../022-g++-14_14.2.0-13ubuntu1_amd64.deb ... 301s Unpacking g++-14 (14.2.0-13ubuntu1) ... 301s Selecting previously unselected package g++-x86-64-linux-gnu. 301s Preparing to unpack .../023-g++-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 301s Unpacking g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 301s Selecting previously unselected package g++. 302s Preparing to unpack .../024-g++_4%3a14.1.0-2ubuntu1_amd64.deb ... 302s Unpacking g++ (4:14.1.0-2ubuntu1) ... 302s Selecting previously unselected package build-essential. 302s Preparing to unpack .../025-build-essential_12.10ubuntu1_amd64.deb ... 302s Unpacking build-essential (12.10ubuntu1) ... 302s Selecting previously unselected package dctrl-tools. 302s Preparing to unpack .../026-dctrl-tools_2.24-3build3_amd64.deb ... 302s Unpacking dctrl-tools (2.24-3build3) ... 302s Selecting previously unselected package fonts-dejavu-mono. 302s Preparing to unpack .../027-fonts-dejavu-mono_2.37-8_all.deb ... 302s Unpacking fonts-dejavu-mono (2.37-8) ... 302s Selecting previously unselected package fonts-dejavu-core. 302s Preparing to unpack .../028-fonts-dejavu-core_2.37-8_all.deb ... 302s Unpacking fonts-dejavu-core (2.37-8) ... 302s Selecting previously unselected package fontconfig-config. 302s Preparing to unpack .../029-fontconfig-config_2.15.0-1.1ubuntu2_amd64.deb ... 302s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 302s Selecting previously unselected package libfontconfig1:amd64. 302s Preparing to unpack .../030-libfontconfig1_2.15.0-1.1ubuntu2_amd64.deb ... 302s Unpacking libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ... 302s Selecting previously unselected package fontconfig. 302s Preparing to unpack .../031-fontconfig_2.15.0-1.1ubuntu2_amd64.deb ... 302s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 302s Selecting previously unselected package fonts-font-awesome. 302s Preparing to unpack .../032-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 302s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 302s Selecting previously unselected package fonts-glyphicons-halflings. 302s Preparing to unpack .../033-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 302s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 302s Selecting previously unselected package fonts-mathjax. 302s Preparing to unpack .../034-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 302s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 302s Selecting previously unselected package libgfortran5:amd64. 302s Preparing to unpack .../035-libgfortran5_14.2.0-13ubuntu1_amd64.deb ... 302s Unpacking libgfortran5:amd64 (14.2.0-13ubuntu1) ... 302s Selecting previously unselected package libgfortran-14-dev:amd64. 302s Preparing to unpack .../036-libgfortran-14-dev_14.2.0-13ubuntu1_amd64.deb ... 302s Unpacking libgfortran-14-dev:amd64 (14.2.0-13ubuntu1) ... 302s Selecting previously unselected package gfortran-14-x86-64-linux-gnu. 302s Preparing to unpack .../037-gfortran-14-x86-64-linux-gnu_14.2.0-13ubuntu1_amd64.deb ... 302s Unpacking gfortran-14-x86-64-linux-gnu (14.2.0-13ubuntu1) ... 303s Selecting previously unselected package gfortran-14. 303s Preparing to unpack .../038-gfortran-14_14.2.0-13ubuntu1_amd64.deb ... 303s Unpacking gfortran-14 (14.2.0-13ubuntu1) ... 303s Selecting previously unselected package gfortran-x86-64-linux-gnu. 303s Preparing to unpack .../039-gfortran-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 303s Unpacking gfortran-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 303s Selecting previously unselected package gfortran. 303s Preparing to unpack .../040-gfortran_4%3a14.1.0-2ubuntu1_amd64.deb ... 303s Unpacking gfortran (4:14.1.0-2ubuntu1) ... 303s Selecting previously unselected package icu-devtools. 303s Preparing to unpack .../041-icu-devtools_76.1-1ubuntu2_amd64.deb ... 303s Unpacking icu-devtools (76.1-1ubuntu2) ... 303s Selecting previously unselected package javascript-common. 303s Preparing to unpack .../042-javascript-common_11+nmu1_all.deb ... 303s Unpacking javascript-common (11+nmu1) ... 303s Selecting previously unselected package libsuitesparseconfig7:amd64. 303s Preparing to unpack .../043-libsuitesparseconfig7_1%3a7.8.3+dfsg-2_amd64.deb ... 303s Unpacking libsuitesparseconfig7:amd64 (1:7.8.3+dfsg-2) ... 303s Selecting previously unselected package libamd3:amd64. 303s Preparing to unpack .../044-libamd3_1%3a7.8.3+dfsg-2_amd64.deb ... 303s Unpacking libamd3:amd64 (1:7.8.3+dfsg-2) ... 303s Selecting previously unselected package libblas3:amd64. 303s Preparing to unpack .../045-libblas3_3.12.0-4_amd64.deb ... 303s Unpacking libblas3:amd64 (3.12.0-4) ... 303s Selecting previously unselected package libblas-dev:amd64. 303s Preparing to unpack .../046-libblas-dev_3.12.0-4_amd64.deb ... 303s Unpacking libblas-dev:amd64 (3.12.0-4) ... 303s Selecting previously unselected package libboost1.83-dev:amd64. 303s Preparing to unpack .../047-libboost1.83-dev_1.83.0-4ubuntu2_amd64.deb ... 303s Unpacking libboost1.83-dev:amd64 (1.83.0-4ubuntu2) ... 305s Selecting previously unselected package libboost-dev:amd64. 305s Preparing to unpack .../048-libboost-dev_1.83.0.2ubuntu1_amd64.deb ... 305s Unpacking libboost-dev:amd64 (1.83.0.2ubuntu1) ... 305s Selecting previously unselected package libbz2-dev:amd64. 305s Preparing to unpack .../049-libbz2-dev_1.0.8-6_amd64.deb ... 305s Unpacking libbz2-dev:amd64 (1.0.8-6) ... 305s Selecting previously unselected package libpixman-1-0:amd64. 305s Preparing to unpack .../050-libpixman-1-0_0.44.0-3_amd64.deb ... 305s Unpacking libpixman-1-0:amd64 (0.44.0-3) ... 305s Selecting previously unselected package libxcb-render0:amd64. 305s Preparing to unpack .../051-libxcb-render0_1.17.0-2_amd64.deb ... 305s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 306s Selecting previously unselected package libxcb-shm0:amd64. 306s Preparing to unpack .../052-libxcb-shm0_1.17.0-2_amd64.deb ... 306s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 306s Selecting previously unselected package libxrender1:amd64. 306s Preparing to unpack .../053-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 306s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 306s Selecting previously unselected package libcairo2:amd64. 306s Preparing to unpack .../054-libcairo2_1.18.2-2_amd64.deb ... 306s Unpacking libcairo2:amd64 (1.18.2-2) ... 306s Selecting previously unselected package libcolamd3:amd64. 306s Preparing to unpack .../055-libcolamd3_1%3a7.8.3+dfsg-2_amd64.deb ... 306s Unpacking libcolamd3:amd64 (1:7.8.3+dfsg-2) ... 306s Selecting previously unselected package libdatrie1:amd64. 306s Preparing to unpack .../056-libdatrie1_0.2.13-3build1_amd64.deb ... 306s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 306s Selecting previously unselected package libdeflate0:amd64. 306s Preparing to unpack .../057-libdeflate0_1.23-1_amd64.deb ... 306s Unpacking libdeflate0:amd64 (1.23-1) ... 306s Selecting previously unselected package libdeflate-dev:amd64. 306s Preparing to unpack .../058-libdeflate-dev_1.23-1_amd64.deb ... 306s Unpacking libdeflate-dev:amd64 (1.23-1) ... 306s Selecting previously unselected package libfftw3-double3:amd64. 306s Preparing to unpack .../059-libfftw3-double3_3.3.10-2fakesync1build1_amd64.deb ... 306s Unpacking libfftw3-double3:amd64 (3.3.10-2fakesync1build1) ... 306s Selecting previously unselected package libltdl7:amd64. 306s Preparing to unpack .../060-libltdl7_2.5.4-2.1_amd64.deb ... 306s Unpacking libltdl7:amd64 (2.5.4-2.1) ... 306s Selecting previously unselected package libglpk40:amd64. 306s Preparing to unpack .../061-libglpk40_5.0-1build2_amd64.deb ... 306s Unpacking libglpk40:amd64 (5.0-1build2) ... 306s Selecting previously unselected package libgraphite2-3:amd64. 306s Preparing to unpack .../062-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 306s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 306s Selecting previously unselected package libharfbuzz0b:amd64. 306s Preparing to unpack .../063-libharfbuzz0b_10.2.0-1_amd64.deb ... 306s Unpacking libharfbuzz0b:amd64 (10.2.0-1) ... 306s Selecting previously unselected package x11-common. 306s Preparing to unpack .../064-x11-common_1%3a7.7+23ubuntu3_all.deb ... 306s Unpacking x11-common (1:7.7+23ubuntu3) ... 306s Selecting previously unselected package libice6:amd64. 306s Preparing to unpack .../065-libice6_2%3a1.1.1-1_amd64.deb ... 306s Unpacking libice6:amd64 (2:1.1.1-1) ... 306s Selecting previously unselected package libicu-dev:amd64. 306s Preparing to unpack .../066-libicu-dev_76.1-1ubuntu2_amd64.deb ... 306s Unpacking libicu-dev:amd64 (76.1-1ubuntu2) ... 307s Selecting previously unselected package libjpeg-turbo8:amd64. 307s Preparing to unpack .../067-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ... 307s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 307s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 307s Preparing to unpack .../068-libjpeg-turbo8-dev_2.1.5-3ubuntu2_amd64.deb ... 307s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-3ubuntu2) ... 307s Selecting previously unselected package libjpeg8:amd64. 307s Preparing to unpack .../069-libjpeg8_8c-2ubuntu11_amd64.deb ... 307s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 307s Selecting previously unselected package libjpeg8-dev:amd64. 307s Preparing to unpack .../070-libjpeg8-dev_8c-2ubuntu11_amd64.deb ... 307s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu11) ... 307s Selecting previously unselected package libjpeg-dev:amd64. 307s Preparing to unpack .../071-libjpeg-dev_8c-2ubuntu11_amd64.deb ... 307s Unpacking libjpeg-dev:amd64 (8c-2ubuntu11) ... 307s Selecting previously unselected package libjs-bootstrap. 307s Preparing to unpack .../072-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 307s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 307s Selecting previously unselected package libjs-popper.js. 307s Preparing to unpack .../073-libjs-popper.js_1.16.1+ds-6_all.deb ... 307s Unpacking libjs-popper.js (1.16.1+ds-6) ... 307s Selecting previously unselected package libjs-bootstrap4. 307s Preparing to unpack .../074-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 307s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 307s Selecting previously unselected package libjs-d3. 307s Preparing to unpack .../075-libjs-d3_3.5.17-4_all.deb ... 307s Unpacking libjs-d3 (3.5.17-4) ... 307s Selecting previously unselected package libjs-es5-shim. 307s Preparing to unpack .../076-libjs-es5-shim_4.6.7-2_all.deb ... 307s Unpacking libjs-es5-shim (4.6.7-2) ... 307s Selecting previously unselected package libjs-highlight.js. 307s Preparing to unpack .../077-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 307s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 307s Selecting previously unselected package libjs-jquery. 307s Preparing to unpack .../078-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 307s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 307s Selecting previously unselected package libjs-jquery-datatables. 307s Preparing to unpack .../079-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 307s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 307s Selecting previously 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package libjs-prettify. 307s Preparing to unpack .../085-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 307s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 308s Selecting previously unselected package liblapack3:amd64. 308s Preparing to unpack .../086-liblapack3_3.12.0-4_amd64.deb ... 308s Unpacking liblapack3:amd64 (3.12.0-4) ... 308s Selecting previously unselected package liblapack-dev:amd64. 308s Preparing to unpack .../087-liblapack-dev_3.12.0-4_amd64.deb ... 308s Unpacking liblapack-dev:amd64 (3.12.0-4) ... 308s Selecting previously unselected package liblerc4:amd64. 308s Preparing to unpack .../088-liblerc4_4.0.0+ds-5ubuntu1_amd64.deb ... 308s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 308s Selecting previously unselected package liblua5.4-0:amd64. 308s Preparing to unpack .../089-liblua5.4-0_5.4.7-1_amd64.deb ... 308s Unpacking liblua5.4-0:amd64 (5.4.7-1) ... 308s Selecting previously unselected package libncurses-dev:amd64. 308s Preparing to unpack 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previously unselected package libsharpyuv0:amd64. 309s Preparing to unpack .../106-libsharpyuv0_1.5.0-0.1_amd64.deb ... 309s Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ... 309s Selecting previously unselected package libsm6:amd64. 309s Preparing to unpack .../107-libsm6_2%3a1.2.4-1_amd64.deb ... 309s Unpacking libsm6:amd64 (2:1.2.4-1) ... 309s Selecting previously unselected package libtcl8.6:amd64. 309s Preparing to unpack .../108-libtcl8.6_8.6.16+dfsg-1_amd64.deb ... 309s Unpacking libtcl8.6:amd64 (8.6.16+dfsg-1) ... 309s Selecting previously unselected package libjbig0:amd64. 309s Preparing to unpack .../109-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 309s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 309s Selecting previously unselected package libwebp7:amd64. 309s Preparing to unpack .../110-libwebp7_1.5.0-0.1_amd64.deb ... 309s Unpacking libwebp7:amd64 (1.5.0-0.1) ... 309s Selecting previously unselected package libtiff6:amd64. 309s Preparing to unpack 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309s Selecting previously unselected package unzip. 309s Preparing to unpack .../117-unzip_6.0-28ubuntu6_amd64.deb ... 309s Unpacking unzip (6.0-28ubuntu6) ... 309s Selecting previously unselected package xdg-utils. 309s Preparing to unpack .../118-xdg-utils_1.2.1-0ubuntu1_all.deb ... 309s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 309s Selecting previously unselected package r-base-core. 309s Preparing to unpack .../119-r-base-core_4.4.2-1build1_amd64.deb ... 309s Unpacking r-base-core (4.4.2-1build1) ... 310s Selecting previously unselected package r-cran-littler. 310s Preparing to unpack .../120-r-cran-littler_0.3.20-2_amd64.deb ... 310s Unpacking r-cran-littler (0.3.20-2) ... 310s Selecting previously unselected package littler. 310s Preparing to unpack .../121-littler_0.3.20-2_all.deb ... 310s Unpacking littler (0.3.20-2) ... 310s Selecting previously unselected package node-bootstrap-sass. 310s Preparing to unpack .../122-node-bootstrap-sass_3.4.3-2_all.deb ... 310s Unpacking node-bootstrap-sass (3.4.3-2) ... 310s Selecting previously unselected package node-html5shiv. 310s Preparing to unpack .../123-node-html5shiv_3.7.3+dfsg-5_all.deb ... 310s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 310s Selecting previously unselected package node-normalize.css. 310s Preparing to unpack .../124-node-normalize.css_8.0.1-5_all.deb ... 310s Unpacking node-normalize.css (8.0.1-5) ... 310s Selecting previously unselected package pandoc-data. 310s Preparing to unpack .../125-pandoc-data_3.1.11.1-3build1_all.deb ... 310s Unpacking pandoc-data (3.1.11.1-3build1) ... 310s Selecting previously unselected package pandoc. 310s Preparing to unpack .../126-pandoc_3.1.11.1+ds-2_amd64.deb ... 310s Unpacking pandoc (3.1.11.1+ds-2) ... 311s Selecting previously unselected package liblzma-dev:amd64. 311s Preparing to unpack .../127-liblzma-dev_5.6.3-1_amd64.deb ... 311s Unpacking liblzma-dev:amd64 (5.6.3-1) ... 311s Selecting previously unselected package pkgconf-bin. 311s Preparing to 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to unpack .../150-r-cran-jsonlite_1.8.9+dfsg-1_amd64.deb ... 312s Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ... 312s Selecting previously unselected package r-cran-mime. 312s Preparing to unpack .../151-r-cran-mime_0.12-2_amd64.deb ... 312s Unpacking r-cran-mime (0.12-2) ... 312s Selecting previously unselected package r-cran-sys. 312s Preparing to unpack .../152-r-cran-sys_3.4.3-1_amd64.deb ... 312s Unpacking r-cran-sys (3.4.3-1) ... 312s Selecting previously unselected package r-cran-askpass. 312s Preparing to unpack .../153-r-cran-askpass_1.2.1-1_amd64.deb ... 312s Unpacking r-cran-askpass (1.2.1-1) ... 312s Selecting previously unselected package r-cran-openssl. 312s Preparing to unpack .../154-r-cran-openssl_2.2.0+dfsg-1_amd64.deb ... 312s Unpacking r-cran-openssl (2.2.0+dfsg-1) ... 312s Selecting previously unselected package r-cran-r6. 312s Preparing to unpack .../155-r-cran-r6_2.5.1-1_all.deb ... 312s Unpacking r-cran-r6 (2.5.1-1) ... 312s Selecting previously unselected package r-cran-httr. 312s Preparing to unpack .../156-r-cran-httr_1.4.7+dfsg-1_all.deb ... 312s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 312s Selecting previously unselected package r-bioc-ucsc.utils. 312s Preparing to unpack .../157-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 312s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 312s Selecting previously unselected package r-bioc-genomeinfodbdata. 312s Preparing to unpack .../158-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 312s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 312s Selecting previously unselected package r-bioc-genomeinfodb. 312s Preparing to unpack .../159-r-bioc-genomeinfodb_1.42.1+dfsg-2_all.deb ... 312s Unpacking r-bioc-genomeinfodb (1.42.1+dfsg-2) ... 312s Selecting previously unselected package r-cran-crayon. 312s Preparing to unpack .../160-r-cran-crayon_1.5.3-1_all.deb ... 312s Unpacking r-cran-crayon (1.5.3-1) ... 312s Selecting previously unselected package r-bioc-biostrings. 312s Preparing to unpack .../161-r-bioc-biostrings_2.74.1+dfsg-2_amd64.deb ... 312s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 312s Selecting previously unselected package r-cran-lattice. 312s Preparing to unpack .../162-r-cran-lattice_0.22-6-1_amd64.deb ... 312s Unpacking r-cran-lattice (0.22-6-1) ... 313s Selecting previously unselected package r-cran-matrix. 313s Preparing to unpack .../163-r-cran-matrix_1.7-2-1_amd64.deb ... 313s Unpacking r-cran-matrix (1.7-2-1) ... 313s Selecting previously unselected package r-cran-matrixstats. 313s Preparing to unpack .../164-r-cran-matrixstats_1.5.0-1_amd64.deb ... 313s Unpacking r-cran-matrixstats (1.5.0-1) ... 313s Selecting previously unselected package r-bioc-matrixgenerics. 313s Preparing to unpack .../165-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 313s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 313s Selecting previously unselected package r-cran-abind. 313s Preparing to unpack .../166-r-cran-abind_1.4-8-1_all.deb ... 313s Unpacking r-cran-abind (1.4-8-1) ... 313s Selecting previously unselected package r-bioc-s4arrays. 313s Preparing to unpack .../167-r-bioc-s4arrays_1.6.0+dfsg-2_amd64.deb ... 313s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 313s Selecting previously unselected package r-bioc-sparsearray. 313s Preparing to unpack .../168-r-bioc-sparsearray_1.6.1+dfsg-1_amd64.deb ... 313s Unpacking r-bioc-sparsearray (1.6.1+dfsg-1) ... 313s Selecting previously unselected package r-bioc-delayedarray. 313s Preparing to unpack .../169-r-bioc-delayedarray_0.32.0+dfsg-2_amd64.deb ... 313s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 313s Selecting previously unselected package r-bioc-genomicranges. 313s Preparing to unpack .../170-r-bioc-genomicranges_1.58.0+dfsg-2_amd64.deb ... 313s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 313s Selecting previously unselected package r-bioc-summarizedexperiment. 313s Preparing to unpack .../171-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 313s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 313s Selecting previously unselected package r-cran-locfit. 313s Preparing to unpack .../172-r-cran-locfit_1.5-9.10-1_amd64.deb ... 313s Unpacking r-cran-locfit (1.5-9.10-1) ... 313s Selecting previously unselected package r-cran-cli. 313s Preparing to unpack .../173-r-cran-cli_3.6.3-1_amd64.deb ... 313s Unpacking r-cran-cli (3.6.3-1) ... 313s Selecting previously unselected package r-cran-glue. 313s Preparing to unpack .../174-r-cran-glue_1.8.0-1_amd64.deb ... 313s Unpacking r-cran-glue (1.8.0-1) ... 313s Selecting previously unselected package r-cran-rlang. 313s Preparing to unpack .../175-r-cran-rlang_1.1.5-1_amd64.deb ... 313s Unpacking r-cran-rlang (1.1.5-1) ... 313s Selecting previously unselected package r-cran-lifecycle. 313s Preparing to unpack .../176-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 313s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 313s Selecting previously unselected package r-cran-gtable. 313s Preparing to unpack .../177-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 313s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 313s Selecting previously unselected package r-cran-isoband. 313s Preparing to unpack .../178-r-cran-isoband_0.2.7-1_amd64.deb ... 313s Unpacking r-cran-isoband (0.2.7-1) ... 313s Selecting previously unselected package r-cran-mass. 313s Preparing to unpack .../179-r-cran-mass_7.3-64-1_amd64.deb ... 313s Unpacking r-cran-mass (7.3-64-1) ... 313s Selecting previously unselected package r-cran-nlme. 313s Preparing to unpack .../180-r-cran-nlme_3.1.167-1_amd64.deb ... 313s Unpacking r-cran-nlme (3.1.167-1) ... 313s Selecting previously unselected package r-cran-mgcv. 314s Preparing to unpack .../181-r-cran-mgcv_1.9-1-1_amd64.deb ... 314s Unpacking r-cran-mgcv (1.9-1-1) ... 314s Selecting previously unselected package r-cran-farver. 314s Preparing to unpack .../182-r-cran-farver_2.1.2-1_amd64.deb ... 314s Unpacking r-cran-farver (2.1.2-1) ... 314s Selecting previously unselected package r-cran-labeling. 314s Preparing to unpack .../183-r-cran-labeling_0.4.3-1_all.deb ... 314s Unpacking r-cran-labeling (0.4.3-1) ... 314s Selecting previously unselected package r-cran-colorspace. 314s Preparing to unpack .../184-r-cran-colorspace_2.1-1+dfsg-1_amd64.deb ... 314s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 314s Selecting previously unselected package r-cran-munsell. 314s Preparing to unpack .../185-r-cran-munsell_0.5.1-1_all.deb ... 314s Unpacking r-cran-munsell (0.5.1-1) ... 314s Selecting previously unselected package r-cran-rcolorbrewer. 314s Preparing to unpack .../186-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 314s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 314s Selecting previously unselected package r-cran-viridislite. 314s Preparing to unpack .../187-r-cran-viridislite_0.4.2-2_all.deb ... 314s Unpacking r-cran-viridislite (0.4.2-2) ... 314s Selecting previously unselected package r-cran-scales. 314s Preparing to unpack .../188-r-cran-scales_1.3.0-1_all.deb ... 314s Unpacking r-cran-scales (1.3.0-1) ... 314s Selecting previously unselected package r-cran-fansi. 314s Preparing to unpack .../189-r-cran-fansi_1.0.5-1_amd64.deb ... 314s Unpacking r-cran-fansi (1.0.5-1) ... 314s Selecting previously unselected package r-cran-magrittr. 314s Preparing to unpack .../190-r-cran-magrittr_2.0.3-1_amd64.deb ... 314s Unpacking r-cran-magrittr (2.0.3-1) ... 314s Selecting previously unselected package r-cran-utf8. 314s Preparing to unpack .../191-r-cran-utf8_1.2.4-1_amd64.deb ... 314s Unpacking r-cran-utf8 (1.2.4-1) ... 314s Selecting previously unselected package r-cran-vctrs. 314s Preparing to unpack .../192-r-cran-vctrs_0.6.5-1_amd64.deb ... 314s Unpacking r-cran-vctrs (0.6.5-1) ... 314s Selecting previously unselected package r-cran-pillar. 314s Preparing to unpack .../193-r-cran-pillar_1.10.1+dfsg-1_all.deb ... 314s Unpacking r-cran-pillar (1.10.1+dfsg-1) ... 314s Selecting previously unselected package r-cran-pkgconfig. 314s Preparing to unpack .../194-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 314s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 314s Selecting previously unselected package r-cran-tibble. 314s Preparing to unpack .../195-r-cran-tibble_3.2.1+dfsg-3_amd64.deb ... 314s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 314s Selecting previously unselected package r-cran-withr. 314s Preparing to unpack .../196-r-cran-withr_3.0.2+dfsg-1_all.deb ... 314s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 314s Selecting previously unselected package r-cran-ggplot2. 314s Preparing to unpack .../197-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 314s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 314s Selecting previously unselected package r-cran-pkgkitten. 314s Preparing to unpack .../198-r-cran-pkgkitten_0.2.4-1_all.deb ... 314s Unpacking r-cran-pkgkitten (0.2.4-1) ... 314s Selecting previously unselected package r-cran-rcpp. 314s Preparing to unpack .../199-r-cran-rcpp_1.0.14-1_amd64.deb ... 314s Unpacking r-cran-rcpp (1.0.14-1) ... 315s Selecting previously unselected package r-cran-rcpparmadillo. 315s Preparing to unpack .../200-r-cran-rcpparmadillo_14.2.2-1-1_amd64.deb ... 315s Unpacking r-cran-rcpparmadillo (14.2.2-1-1) ... 315s Selecting previously unselected package r-bioc-deseq2. 315s Preparing to unpack .../201-r-bioc-deseq2_1.46.0+dfsg-2_amd64.deb ... 315s Unpacking r-bioc-deseq2 (1.46.0+dfsg-2) ... 315s Selecting previously unselected package r-cran-bitops. 315s Preparing to unpack .../202-r-cran-bitops_1.0-9-1_amd64.deb ... 315s Unpacking r-cran-bitops (1.0-9-1) ... 315s Selecting previously unselected package r-bioc-rhtslib. 315s Preparing to unpack .../203-r-bioc-rhtslib_3.2.0+dfsg-2_amd64.deb ... 315s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 315s Selecting previously unselected package r-bioc-rsamtools. 315s Preparing to unpack .../204-r-bioc-rsamtools_2.22.0+dfsg-2_amd64.deb ... 315s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 315s Selecting previously unselected package r-bioc-genomicalignments. 315s Preparing to unpack .../205-r-bioc-genomicalignments_1.42.0-2_amd64.deb ... 315s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 315s Selecting previously unselected package r-cran-statmod. 315s Preparing to unpack .../206-r-cran-statmod_1.5.0-1_amd64.deb ... 315s Unpacking r-cran-statmod (1.5.0-1) ... 315s Selecting previously unselected package r-bioc-limma. 315s Preparing to unpack .../207-r-bioc-limma_3.62.2+dfsg-1_amd64.deb ... 315s Unpacking r-bioc-limma (3.62.2+dfsg-1) ... 315s Selecting previously unselected package r-cran-survival. 315s Preparing to unpack .../208-r-cran-survival_3.8-3-1_amd64.deb ... 315s Unpacking r-cran-survival (3.8-3-1) ... 315s Selecting previously unselected package r-bioc-multtest. 315s Preparing to unpack .../209-r-bioc-multtest_2.62.0-2_amd64.deb ... 315s Unpacking r-bioc-multtest (2.62.0-2) ... 315s Selecting previously unselected package r-cran-xml. 315s Preparing to unpack .../210-r-cran-xml_3.99-0.18-1_amd64.deb ... 315s Unpacking r-cran-xml (3.99-0.18-1) ... 315s Selecting previously unselected package r-cran-rcurl. 315s Preparing to unpack .../211-r-cran-rcurl_1.98-1.16+dfsg-1_amd64.deb ... 315s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 315s Selecting previously unselected package r-cran-rjson. 315s Preparing to unpack .../212-r-cran-rjson_0.2.23-1_amd64.deb ... 315s Unpacking r-cran-rjson (0.2.23-1) ... 315s Selecting previously unselected package r-cran-yaml. 315s Preparing to unpack .../213-r-cran-yaml_2.3.10-1_amd64.deb ... 315s Unpacking r-cran-yaml (2.3.10-1) ... 315s Selecting previously unselected package r-cran-restfulr. 315s Preparing to unpack .../214-r-cran-restfulr_0.0.15-1_amd64.deb ... 315s Unpacking r-cran-restfulr (0.0.15-1) ... 316s Selecting previously unselected package r-bioc-rtracklayer. 316s Preparing to unpack .../215-r-bioc-rtracklayer_1.66.0-2_amd64.deb ... 316s Unpacking r-bioc-rtracklayer (1.66.0-2) ... 316s Selecting previously unselected package r-cran-digest. 316s Preparing to unpack .../216-r-cran-digest_0.6.37-1_amd64.deb ... 316s Unpacking r-cran-digest (0.6.37-1) ... 316s Selecting previously unselected package r-cran-ape. 316s Preparing to unpack .../217-r-cran-ape_5.8-1-1_amd64.deb ... 316s Unpacking r-cran-ape (5.8-1-1) ... 316s Selecting previously unselected package r-cran-base64enc. 316s Preparing to unpack .../218-r-cran-base64enc_0.1-3-3_amd64.deb ... 316s Unpacking r-cran-base64enc (0.1-3-3) ... 316s Selecting previously unselected package r-cran-brio. 316s Preparing to unpack .../219-r-cran-brio_1.1.5-1_amd64.deb ... 316s Unpacking r-cran-brio (1.1.5-1) ... 316s Selecting previously unselected package r-cran-fastmap. 316s Preparing to unpack .../220-r-cran-fastmap_1.2.0-1_amd64.deb ... 316s Unpacking r-cran-fastmap (1.2.0-1) ... 316s Selecting previously unselected package r-cran-cachem. 316s Preparing to unpack .../221-r-cran-cachem_1.1.0-1_amd64.deb ... 316s Unpacking r-cran-cachem (1.1.0-1) ... 316s Selecting previously unselected package r-cran-htmltools. 316s Preparing to unpack .../222-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 316s Unpacking r-cran-htmltools (0.5.8.1-1) ... 316s Selecting previously unselected package r-cran-jquerylib. 316s Preparing to unpack .../223-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 316s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 316s Selecting previously unselected package r-cran-memoise. 316s Preparing to unpack .../224-r-cran-memoise_2.0.1-1_all.deb ... 316s Unpacking r-cran-memoise (2.0.1-1) ... 316s Selecting previously unselected package r-cran-fs. 316s Preparing to unpack .../225-r-cran-fs_1.6.5+dfsg-1_amd64.deb ... 316s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 316s Selecting previously unselected package r-cran-rappdirs. 316s Preparing to unpack .../226-r-cran-rappdirs_0.3.3-1_amd64.deb ... 316s Unpacking r-cran-rappdirs (0.3.3-1) ... 316s Selecting previously unselected package r-cran-sass. 316s Preparing to unpack .../227-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 316s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 316s Selecting previously unselected package r-cran-bslib. 316s Preparing to unpack .../228-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 316s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 316s Selecting previously unselected package r-cran-ps. 316s Preparing to unpack .../229-r-cran-ps_1.8.1-1_amd64.deb ... 316s Unpacking r-cran-ps (1.8.1-1) ... 316s Selecting previously unselected package r-cran-processx. 317s Preparing to unpack .../230-r-cran-processx_3.8.5-1_amd64.deb ... 317s Unpacking r-cran-processx (3.8.5-1) ... 317s Selecting previously unselected package r-cran-callr. 317s Preparing to unpack .../231-r-cran-callr_3.7.6-1_all.deb ... 317s Unpacking r-cran-callr (3.7.6-1) ... 317s Selecting previously unselected package r-cran-class. 317s Preparing to unpack .../232-r-cran-class_7.3-23-1_amd64.deb ... 317s Unpacking r-cran-class (7.3-23-1) ... 317s Selecting previously unselected package r-cran-proxy. 317s Preparing to unpack .../233-r-cran-proxy_0.4-27-1_amd64.deb ... 317s Unpacking r-cran-proxy (0.4-27-1) ... 317s Selecting previously unselected package r-cran-e1071. 317s Preparing to unpack .../234-r-cran-e1071_1.7-16-1_amd64.deb ... 317s Unpacking r-cran-e1071 (1.7-16-1) ... 317s Selecting previously unselected package r-cran-iterators. 317s Preparing to unpack .../235-r-cran-iterators_1.0.14-1_all.deb ... 317s Unpacking r-cran-iterators (1.0.14-1) ... 317s Selecting previously unselected package r-cran-foreach. 317s Preparing to unpack .../236-r-cran-foreach_1.5.2-1_all.deb ... 317s Unpacking r-cran-foreach (1.5.2-1) ... 317s Selecting previously unselected package r-cran-data.table. 317s Preparing to unpack .../237-r-cran-data.table_1.16.4+dfsg-1_amd64.deb ... 317s Unpacking r-cran-data.table (1.16.4+dfsg-1) ... 317s Selecting previously unselected package r-cran-modelmetrics. 317s Preparing to unpack .../238-r-cran-modelmetrics_1.2.2.2-1build1_amd64.deb ... 317s Unpacking r-cran-modelmetrics (1.2.2.2-1build1) ... 317s Selecting previously unselected package r-cran-plyr. 317s Preparing to unpack .../239-r-cran-plyr_1.8.9-1_amd64.deb ... 317s Unpacking r-cran-plyr (1.8.9-1) ... 317s Selecting previously unselected package r-cran-proc. 317s Preparing to unpack .../240-r-cran-proc_1.18.5-1_amd64.deb ... 317s Unpacking r-cran-proc (1.18.5-1) ... 317s Selecting previously unselected package r-cran-generics. 317s Preparing to unpack .../241-r-cran-generics_0.1.3-1_all.deb ... 317s Unpacking r-cran-generics (0.1.3-1) ... 317s Selecting previously unselected package r-cran-tidyselect. 317s Preparing to unpack .../242-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ... 317s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 317s Selecting previously unselected package r-cran-dplyr. 317s Preparing to unpack .../243-r-cran-dplyr_1.1.4-4_amd64.deb ... 317s Unpacking r-cran-dplyr (1.1.4-4) ... 317s Selecting previously unselected package r-cran-tzdb. 317s Preparing to unpack .../244-r-cran-tzdb_0.4.0-2_amd64.deb ... 317s Unpacking r-cran-tzdb (0.4.0-2) ... 317s Selecting previously unselected package r-cran-clock. 317s Preparing to unpack .../245-r-cran-clock_0.7.1-1_amd64.deb ... 317s Unpacking r-cran-clock (0.7.1-1) ... 317s Selecting previously unselected package r-cran-gower. 317s Preparing to unpack .../246-r-cran-gower_1.0.2-1_amd64.deb ... 317s Unpacking r-cran-gower (1.0.2-1) ... 317s Selecting previously unselected package r-cran-hardhat. 317s Preparing to unpack .../247-r-cran-hardhat_1.4.0+dfsg-1_all.deb ... 317s Unpacking r-cran-hardhat (1.4.0+dfsg-1) ... 318s Selecting previously unselected package r-cran-rpart. 318s Preparing to unpack .../248-r-cran-rpart_4.1.24-1_amd64.deb ... 318s Unpacking r-cran-rpart (4.1.24-1) ... 318s Selecting previously unselected package r-cran-nnet. 318s Preparing to unpack .../249-r-cran-nnet_7.3-20-1_amd64.deb ... 318s Unpacking r-cran-nnet (7.3-20-1) ... 318s Selecting previously unselected package r-cran-shape. 318s Preparing to unpack .../250-r-cran-shape_1.4.6.1-1_all.deb ... 318s Unpacking r-cran-shape (1.4.6.1-1) ... 318s Selecting previously unselected package r-cran-diagram. 318s Preparing to unpack .../251-r-cran-diagram_1.6.5-2_all.deb ... 318s Unpacking r-cran-diagram (1.6.5-2) ... 318s Selecting previously unselected package r-cran-kernsmooth. 318s Preparing to unpack .../252-r-cran-kernsmooth_2.23-26-1_amd64.deb ... 318s Unpacking r-cran-kernsmooth (2.23-26-1) ... 318s Selecting previously unselected package r-cran-globals. 318s Preparing to unpack .../253-r-cran-globals_0.16.3-1_all.deb ... 318s Unpacking r-cran-globals (0.16.3-1) ... 318s Selecting previously unselected package r-cran-listenv. 318s Preparing to unpack .../254-r-cran-listenv_0.9.1+dfsg-1_all.deb ... 318s Unpacking r-cran-listenv (0.9.1+dfsg-1) ... 318s Selecting previously unselected package r-cran-parallelly. 318s Preparing to unpack .../255-r-cran-parallelly_1.41.0-1_amd64.deb ... 318s Unpacking r-cran-parallelly (1.41.0-1) ... 318s Selecting previously unselected package r-cran-future. 318s Preparing to unpack .../256-r-cran-future_1.34.0+dfsg-1_all.deb ... 318s Unpacking r-cran-future (1.34.0+dfsg-1) ... 318s Selecting previously unselected package r-cran-future.apply. 318s Preparing to unpack .../257-r-cran-future.apply_1.11.3+dfsg-1_all.deb ... 318s Unpacking r-cran-future.apply (1.11.3+dfsg-1) ... 318s Selecting previously unselected package r-cran-numderiv. 318s Preparing to unpack .../258-r-cran-numderiv_2016.8-1.1-3_all.deb ... 318s Unpacking r-cran-numderiv (2016.8-1.1-3) ... 318s Selecting previously unselected package r-cran-progressr. 318s Preparing to unpack .../259-r-cran-progressr_0.15.1-1_all.deb ... 318s Unpacking r-cran-progressr (0.15.1-1) ... 318s Selecting previously unselected package r-cran-squarem. 318s Preparing to unpack .../260-r-cran-squarem_2021.1-1_all.deb ... 318s Unpacking r-cran-squarem (2021.1-1) ... 318s Selecting previously unselected package r-cran-lava. 318s Preparing to unpack .../261-r-cran-lava_1.7.3+dfsg-2_all.deb ... 318s Unpacking r-cran-lava (1.7.3+dfsg-2) ... 318s Selecting previously unselected package r-cran-prodlim. 318s Preparing to unpack .../262-r-cran-prodlim_2024.06.25-1_amd64.deb ... 318s Unpacking r-cran-prodlim (2024.06.25-1) ... 318s Selecting previously unselected package r-cran-ipred. 318s Preparing to unpack .../263-r-cran-ipred_0.9-15-1_amd64.deb ... 318s Unpacking r-cran-ipred (0.9-15-1) ... 318s Selecting previously unselected package r-cran-timechange. 318s Preparing to unpack .../264-r-cran-timechange_0.3.0-1_amd64.deb ... 318s Unpacking r-cran-timechange (0.3.0-1) ... 318s Selecting previously unselected package r-cran-lubridate. 318s Preparing to unpack .../265-r-cran-lubridate_1.9.4+dfsg-1_amd64.deb ... 318s Unpacking r-cran-lubridate (1.9.4+dfsg-1) ... 318s Selecting previously unselected package r-cran-purrr. 318s Preparing to unpack .../266-r-cran-purrr_1.0.2-1_amd64.deb ... 318s Unpacking r-cran-purrr (1.0.2-1) ... 319s Selecting previously unselected package r-cran-stringi. 319s Preparing to unpack .../267-r-cran-stringi_1.8.4-1build1_amd64.deb ... 319s Unpacking r-cran-stringi (1.8.4-1build1) ... 319s Selecting previously unselected package r-cran-stringr. 319s Preparing to unpack .../268-r-cran-stringr_1.5.1-1_all.deb ... 319s Unpacking r-cran-stringr (1.5.1-1) ... 319s Selecting previously unselected package r-cran-tidyr. 319s Preparing to unpack .../269-r-cran-tidyr_1.3.1-1_amd64.deb ... 319s Unpacking r-cran-tidyr (1.3.1-1) ... 319s Selecting previously unselected package r-cran-timedate. 319s Preparing to unpack .../270-r-cran-timedate_4041.110-1_amd64.deb ... 319s Unpacking r-cran-timedate (4041.110-1) ... 319s Selecting previously unselected package r-cran-recipes. 319s Preparing to unpack .../271-r-cran-recipes_1.1.0+dfsg-1_all.deb ... 319s Unpacking r-cran-recipes (1.1.0+dfsg-1) ... 319s Selecting previously unselected package r-cran-reshape2. 319s Preparing to unpack .../272-r-cran-reshape2_1.4.4-2build1_amd64.deb ... 319s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 319s Selecting previously unselected package r-cran-caret. 319s Preparing to unpack .../273-r-cran-caret_7.0-1+dfsg-1_amd64.deb ... 319s Unpacking r-cran-caret (7.0-1+dfsg-1) ... 319s Selecting previously unselected package r-cran-catools. 319s Preparing to unpack .../274-r-cran-catools_1.18.2-1_amd64.deb ... 319s Unpacking r-cran-catools (1.18.2-1) ... 319s Selecting previously unselected package r-cran-cluster. 319s Preparing to unpack .../275-r-cran-cluster_2.1.8-1_amd64.deb ... 319s Unpacking r-cran-cluster (2.1.8-1) ... 319s Selecting previously unselected package r-cran-evaluate. 319s Preparing to unpack .../276-r-cran-evaluate_1.0.3-1_all.deb ... 319s Unpacking r-cran-evaluate (1.0.3-1) ... 319s Selecting previously unselected package r-cran-xfun. 319s Preparing to unpack .../277-r-cran-xfun_0.50+dfsg-1_amd64.deb ... 319s Unpacking r-cran-xfun (0.50+dfsg-1) ... 319s Selecting previously unselected package r-cran-highr. 319s Preparing to unpack .../278-r-cran-highr_0.11+dfsg-1_all.deb ... 319s Unpacking r-cran-highr (0.11+dfsg-1) ... 319s Selecting previously unselected package libjs-mathjax. 319s Preparing to unpack .../279-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 319s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 320s Selecting previously unselected package r-cran-knitr. 320s Preparing to unpack .../280-r-cran-knitr_1.49+dfsg-1_all.deb ... 320s Unpacking r-cran-knitr (1.49+dfsg-1) ... 320s Selecting previously unselected package r-cran-fontawesome. 320s Preparing to unpack .../281-r-cran-fontawesome_0.5.3-1_all.deb ... 320s Unpacking r-cran-fontawesome (0.5.3-1) ... 320s Selecting previously unselected package r-cran-tinytex. 320s Preparing to unpack .../282-r-cran-tinytex_0.54-1_all.deb ... 320s Unpacking r-cran-tinytex (0.54-1) ... 320s Selecting previously unselected package libjs-modernizr. 320s Preparing to unpack .../283-libjs-modernizr_3.13.0-0.1_all.deb ... 320s Unpacking libjs-modernizr (3.13.0-0.1) ... 320s Selecting previously unselected package r-cran-later. 320s Preparing to unpack .../284-r-cran-later_1.4.1+dfsg-1_amd64.deb ... 320s Unpacking r-cran-later (1.4.1+dfsg-1) ... 320s Selecting previously unselected package r-cran-promises. 320s Preparing to unpack .../285-r-cran-promises_1.3.2+dfsg-1_amd64.deb ... 320s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 320s Selecting previously unselected package r-cran-httpuv. 320s Preparing to unpack .../286-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 320s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 320s Selecting previously unselected package r-cran-xtable. 320s Preparing to unpack .../287-r-cran-xtable_1%3a1.8-4-2_all.deb ... 320s Unpacking r-cran-xtable (1:1.8-4-2) ... 320s Selecting previously unselected package r-cran-sourcetools. 320s Preparing to unpack .../288-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 320s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 320s Selecting previously unselected package r-cran-commonmark. 320s Preparing to unpack .../289-r-cran-commonmark_1.9.2-2_amd64.deb ... 320s Unpacking r-cran-commonmark (1.9.2-2) ... 320s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 320s Preparing to unpack .../290-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 320s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 320s Selecting previously unselected package r-cran-shiny. 320s Preparing to unpack .../291-r-cran-shiny_1.9.1+dfsg-1_all.deb ... 320s Unpacking r-cran-shiny (1.9.1+dfsg-1) ... 321s Selecting previously unselected package r-cran-rmarkdown. 321s Preparing to unpack .../292-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 321s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 321s Selecting previously unselected package r-cran-htmlwidgets. 321s Preparing to unpack .../293-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 321s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 321s Selecting previously unselected package r-cran-miniui. 321s Preparing to unpack .../294-r-cran-miniui_0.1.1.1-3build1_all.deb ... 321s Unpacking r-cran-miniui (0.1.1.1-3build1) ... 321s Selecting previously unselected package r-cran-shinyjs. 321s Preparing to unpack .../295-r-cran-shinyjs_2.1.0-1_all.deb ... 321s Unpacking r-cran-shinyjs (2.1.0-1) ... 321s Selecting previously unselected package r-cran-colourpicker. 321s Preparing to unpack .../296-r-cran-colourpicker_1.3.0+dfsg-1_all.deb ... 321s Unpacking r-cran-colourpicker (1.3.0+dfsg-1) ... 321s Selecting previously unselected package r-cran-conquer. 321s Preparing to unpack .../297-r-cran-conquer_1.3.3-1_amd64.deb ... 321s Unpacking r-cran-conquer (1.3.3-1) ... 321s Selecting previously unselected package r-cran-cowplot. 321s Preparing to unpack .../298-r-cran-cowplot_1.1.3+dfsg-1_all.deb ... 321s Unpacking r-cran-cowplot (1.1.3+dfsg-1) ... 321s Selecting previously unselected package r-cran-lazyeval. 321s Preparing to unpack .../299-r-cran-lazyeval_0.2.2-1build1_amd64.deb ... 321s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 321s Selecting previously unselected package r-cran-crosstalk. 321s Preparing to unpack .../300-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 321s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 321s Selecting previously unselected package r-cran-deldir. 321s Preparing to unpack .../301-r-cran-deldir_2.0-4-1build1_amd64.deb ... 321s Unpacking r-cran-deldir (2.0-4-1build1) ... 321s Selecting previously unselected package r-cran-deoptimr. 321s Preparing to unpack .../302-r-cran-deoptimr_1.1-3-1-1_all.deb ... 321s Unpacking r-cran-deoptimr (1.1-3-1-1) ... 321s Selecting previously unselected package r-cran-desc. 321s Preparing to unpack .../303-r-cran-desc_1.4.3-1_all.deb ... 321s Unpacking r-cran-desc (1.4.3-1) ... 321s Selecting previously unselected package r-cran-diffobj. 321s Preparing to unpack .../304-r-cran-diffobj_0.3.5-1_amd64.deb ... 321s Unpacking r-cran-diffobj (0.3.5-1) ... 321s Selecting previously unselected package r-cran-dotcall64. 321s Preparing to unpack .../305-r-cran-dotcall64_1.1-1-1_amd64.deb ... 321s Unpacking r-cran-dotcall64 (1.1-1-1) ... 321s Selecting previously unselected package r-cran-sitmo. 321s Preparing to unpack .../306-r-cran-sitmo_2.0.2-1_amd64.deb ... 321s Unpacking r-cran-sitmo (2.0.2-1) ... 321s Selecting previously unselected package r-cran-dqrng. 321s Preparing to unpack .../307-r-cran-dqrng_0.3.2+dfsg-1_amd64.deb ... 321s Unpacking r-cran-dqrng (0.3.2+dfsg-1) ... 321s Selecting previously unselected package r-cran-fastdummies. 321s Preparing to unpack .../308-r-cran-fastdummies_1.7.5-1_all.deb ... 321s Unpacking r-cran-fastdummies (1.7.5-1) ... 321s Selecting previously unselected package r-cran-fitdistrplus. 322s Preparing to unpack .../309-r-cran-fitdistrplus_1.2-2-1_all.deb ... 322s Unpacking r-cran-fitdistrplus (1.2-2-1) ... 322s Selecting previously unselected package r-cran-fnn. 322s Preparing to unpack .../310-r-cran-fnn_1.1.4.1-1_amd64.deb ... 322s Unpacking r-cran-fnn (1.1.4.1-1) ... 322s Selecting previously unselected package r-cran-gtools. 322s Preparing to unpack .../311-r-cran-gtools_3.9.5-1_amd64.deb ... 322s Unpacking r-cran-gtools (3.9.5-1) ... 322s Selecting previously unselected package r-cran-gdata. 322s Preparing to unpack .../312-r-cran-gdata_3.0.1-1_all.deb ... 322s Unpacking r-cran-gdata (3.0.1-1) ... 322s Selecting previously unselected package r-cran-ggrepel. 322s Preparing to unpack .../313-r-cran-ggrepel_0.9.6-1_amd64.deb ... 322s Unpacking r-cran-ggrepel (0.9.6-1) ... 322s Selecting previously unselected package r-cran-ggridges. 322s Preparing to unpack .../314-r-cran-ggridges_0.5.6-1_all.deb ... 322s Unpacking r-cran-ggridges (0.5.6-1) ... 322s Selecting previously unselected package r-cran-goftest. 322s Preparing to unpack .../315-r-cran-goftest_1.2-3-1_amd64.deb ... 322s Unpacking r-cran-goftest (1.2-3-1) ... 322s Selecting previously unselected package r-cran-gplots. 322s Preparing to unpack .../316-r-cran-gplots_3.2.0-1_all.deb ... 322s Unpacking r-cran-gplots (3.2.0-1) ... 322s Selecting previously unselected package r-cran-gridextra. 322s Preparing to unpack .../317-r-cran-gridextra_2.3-3build1_all.deb ... 322s Unpacking r-cran-gridextra (2.3-3build1) ... 322s Selecting previously unselected package r-cran-rprojroot. 322s Preparing to unpack .../318-r-cran-rprojroot_2.0.4-2_all.deb ... 322s Unpacking r-cran-rprojroot (2.0.4-2) ... 322s Selecting previously unselected package r-cran-here. 322s Preparing to unpack .../319-r-cran-here_1.0.1-2_all.deb ... 322s Unpacking r-cran-here (1.0.1-2) ... 322s Selecting previously unselected package r-cran-ica. 322s Preparing to unpack .../320-r-cran-ica_1.0-3-1_all.deb ... 322s Unpacking r-cran-ica (1.0-3-1) ... 322s Selecting previously unselected package r-cran-igraph. 322s Preparing to unpack .../321-r-cran-igraph_2.1.4-1_amd64.deb ... 322s Unpacking r-cran-igraph (2.1.4-1) ... 322s Selecting previously unselected package r-cran-irlba. 322s Preparing to unpack .../322-r-cran-irlba_2.3.5.1-4_amd64.deb ... 322s Unpacking r-cran-irlba (2.3.5.1-4) ... 322s Selecting previously unselected package r-cran-kernlab. 322s Preparing to unpack .../323-r-cran-kernlab_0.9-33-1_amd64.deb ... 322s Unpacking r-cran-kernlab (0.9-33-1) ... 322s Selecting previously unselected package r-cran-rcpptoml. 322s Preparing to unpack .../324-r-cran-rcpptoml_0.2.2+dfsg-1_amd64.deb ... 322s Unpacking r-cran-rcpptoml (0.2.2+dfsg-1) ... 322s Selecting previously unselected package r-cran-png. 322s Preparing to unpack .../325-r-cran-png_0.1-8-1build2_amd64.deb ... 322s Unpacking r-cran-png (0.1-8-1build2) ... 322s Selecting previously unselected package r-cran-reticulate. 322s Preparing to unpack .../326-r-cran-reticulate_1.39.0+dfsg-1_amd64.deb ... 322s Unpacking r-cran-reticulate (1.39.0+dfsg-1) ... 322s Selecting previously unselected package r-cran-leiden. 322s Preparing to unpack .../327-r-cran-leiden_0.4.3.1+dfsg-1_all.deb ... 322s Unpacking r-cran-leiden (0.4.3.1+dfsg-1) ... 323s Selecting previously unselected package r-cran-zoo. 323s Preparing to unpack .../328-r-cran-zoo_1.8-12-2_amd64.deb ... 323s Unpacking r-cran-zoo (1.8-12-2) ... 323s Selecting previously unselected package r-cran-lmtest. 323s Preparing to unpack .../329-r-cran-lmtest_0.9.40-1_amd64.deb ... 323s Unpacking r-cran-lmtest (0.9.40-1) ... 323s Selecting previously unselected package r-cran-mathjaxr. 323s Preparing to unpack .../330-r-cran-mathjaxr_1.6-0-1_all.deb ... 323s Unpacking r-cran-mathjaxr (1.6-0-1) ... 323s Selecting previously unselected package r-cran-matrixmodels. 323s Preparing to unpack .../331-r-cran-matrixmodels_0.5-3-1_all.deb ... 323s Unpacking r-cran-matrixmodels (0.5-3-1) ... 323s Selecting previously unselected package r-cran-rbibutils. 323s Preparing to unpack .../332-r-cran-rbibutils_2.3-1_amd64.deb ... 323s Unpacking r-cran-rbibutils (2.3-1) ... 323s Selecting previously unselected package r-cran-rdpack. 323s Preparing to unpack .../333-r-cran-rdpack_2.6.2-1_all.deb ... 323s Unpacking r-cran-rdpack (2.6.2-1) ... 323s Selecting previously unselected package r-cran-mnormt. 323s Preparing to unpack .../334-r-cran-mnormt_2.1.1-2_amd64.deb ... 323s Unpacking r-cran-mnormt (2.1.1-2) ... 323s Selecting previously unselected package r-cran-sparsem. 323s Preparing to unpack .../335-r-cran-sparsem_1.84-2-1_amd64.deb ... 323s Unpacking r-cran-sparsem (1.84-2-1) ... 323s Selecting previously unselected package r-cran-quantreg. 323s Preparing to unpack .../336-r-cran-quantreg_6.00-1_amd64.deb ... 323s Unpacking r-cran-quantreg (6.00-1) ... 323s Selecting previously unselected package r-cran-sn. 323s Preparing to unpack .../337-r-cran-sn_2.1.1-2_all.deb ... 323s Unpacking r-cran-sn (2.1.1-2) ... 323s Selecting previously unselected package r-cran-mvtnorm. 323s Preparing to unpack .../338-r-cran-mvtnorm_1.3-3-1_amd64.deb ... 323s Unpacking r-cran-mvtnorm (1.3-3-1) ... 323s Selecting previously unselected package r-cran-tfisher. 323s Preparing to unpack .../339-r-cran-tfisher_0.2.0-3_all.deb ... 323s Unpacking r-cran-tfisher (0.2.0-3) ... 323s Selecting previously unselected package r-cran-plotrix. 323s Preparing to unpack .../340-r-cran-plotrix_3.8-4-1_all.deb ... 323s Unpacking r-cran-plotrix (3.8-4-1) ... 323s Selecting previously unselected package r-cran-th.data. 323s Preparing to unpack .../341-r-cran-th.data_1.1-3-1_all.deb ... 323s Unpacking r-cran-th.data (1.1-3-1) ... 323s Selecting previously unselected package r-cran-sandwich. 323s Preparing to unpack .../342-r-cran-sandwich_3.1-1-1_all.deb ... 323s Unpacking r-cran-sandwich (3.1-1-1) ... 323s Selecting previously unselected package r-cran-multcomp. 323s Preparing to unpack .../343-r-cran-multcomp_1.4-28-1_all.deb ... 323s Unpacking r-cran-multcomp (1.4-28-1) ... 323s Selecting previously unselected package r-cran-mutoss. 323s Preparing to unpack .../344-r-cran-mutoss_0.1-13-1_all.deb ... 323s Unpacking r-cran-mutoss (0.1-13-1) ... 323s Selecting previously unselected package r-cran-robustbase. 323s Preparing to unpack .../345-r-cran-robustbase_0.99-4-1-1_amd64.deb ... 323s Unpacking r-cran-robustbase (0.99-4-1-1) ... 323s Selecting previously unselected package r-cran-qqconf. 323s Preparing to unpack .../346-r-cran-qqconf_1.3.2+dfsg-1_amd64.deb ... 323s Unpacking r-cran-qqconf (1.3.2+dfsg-1) ... 324s Selecting previously unselected package r-cran-metap. 324s Preparing to unpack .../347-r-cran-metap_1.11-2_all.deb ... 324s Unpacking r-cran-metap (1.11-2) ... 324s Selecting previously unselected package r-cran-plotly. 324s Preparing to unpack .../348-r-cran-plotly_4.10.4+dfsg-2_all.deb ... 324s Unpacking r-cran-plotly (4.10.4+dfsg-2) ... 324s Selecting previously unselected package r-cran-segmented. 324s Preparing to unpack .../349-r-cran-segmented_2.1-3-1_all.deb ... 324s Unpacking r-cran-segmented (2.1-3-1) ... 324s Selecting previously unselected package r-cran-mixtools. 324s Preparing to unpack .../350-r-cran-mixtools_2.0.0-1_amd64.deb ... 324s Unpacking r-cran-mixtools (2.0.0-1) ... 324s Selecting previously unselected package r-cran-patchwork. 324s Preparing to unpack .../351-r-cran-patchwork_1.3.0-1_all.deb ... 324s Unpacking r-cran-patchwork (1.3.0-1) ... 324s Selecting previously unselected package r-cran-pbapply. 324s Preparing to unpack .../352-r-cran-pbapply_1.7-2-1_all.deb ... 324s Unpacking r-cran-pbapply (1.7-2-1) ... 324s Selecting previously unselected package r-cran-pkgbuild. 324s Preparing to unpack .../353-r-cran-pkgbuild_1.4.6-1_all.deb ... 324s Unpacking r-cran-pkgbuild (1.4.6-1) ... 324s Selecting previously unselected package r-cran-pkgload. 324s Preparing to unpack .../354-r-cran-pkgload_1.4.0-1_all.deb ... 324s Unpacking r-cran-pkgload (1.4.0-1) ... 324s Selecting previously unselected package r-cran-polyclip. 324s Preparing to unpack .../355-r-cran-polyclip_1.10-7-1_amd64.deb ... 324s Unpacking r-cran-polyclip (1.10-7-1) ... 324s Selecting previously unselected package r-cran-praise. 324s Preparing to unpack .../356-r-cran-praise_1.0.0-4build1_all.deb ... 324s Unpacking r-cran-praise (1.0.0-4build1) ... 324s Selecting previously unselected package r-cran-r.methodss3. 324s Preparing to unpack .../357-r-cran-r.methodss3_1.8.2-1_all.deb ... 324s Unpacking r-cran-r.methodss3 (1.8.2-1) ... 324s Selecting previously unselected package r-cran-r.oo. 324s Preparing to unpack .../358-r-cran-r.oo_1.27.0-1_all.deb ... 324s Unpacking r-cran-r.oo (1.27.0-1) ... 324s Selecting previously unselected package r-cran-r.utils. 324s Preparing to unpack .../359-r-cran-r.utils_2.12.3-1_all.deb ... 324s Unpacking r-cran-r.utils (2.12.3-1) ... 324s Selecting previously unselected package r-cran-rann. 324s Preparing to unpack .../360-r-cran-rann_2.6.2-1_amd64.deb ... 324s Unpacking r-cran-rann (2.6.2-1) ... 324s Selecting previously unselected package r-cran-rcppannoy. 324s Preparing to unpack .../361-r-cran-rcppannoy_0.0.22-1_amd64.deb ... 324s Unpacking r-cran-rcppannoy (0.0.22-1) ... 325s Selecting previously unselected package r-cran-rcppeigen. 325s Preparing to unpack .../362-r-cran-rcppeigen_0.3.4.0.2-1_amd64.deb ... 325s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 325s Selecting previously unselected package r-cran-rcpphnsw. 325s Preparing to unpack .../363-r-cran-rcpphnsw_0.5.0+ds-1_amd64.deb ... 325s Unpacking r-cran-rcpphnsw (0.5.0+ds-1) ... 325s Selecting previously unselected package r-cran-rcppprogress. 325s Preparing to unpack .../364-r-cran-rcppprogress_0.4.2-2build1_all.deb ... 325s Unpacking r-cran-rcppprogress (0.4.2-2build1) ... 325s Selecting previously unselected package r-cran-rocr. 325s Preparing to unpack .../365-r-cran-rocr_1.0-11-3_all.deb ... 325s Unpacking r-cran-rocr (1.0-11-3) ... 325s Selecting previously unselected package r-cran-rspectra. 325s Preparing to unpack .../366-r-cran-rspectra_0.16-2-1_amd64.deb ... 325s Unpacking r-cran-rspectra (0.16-2-1) ... 325s Selecting previously unselected package r-cran-rsvd. 325s Preparing to unpack .../367-r-cran-rsvd_1.0.5-1_all.deb ... 325s Unpacking r-cran-rsvd (1.0.5-1) ... 325s Selecting previously unselected package r-cran-rtsne. 325s Preparing to unpack .../368-r-cran-rtsne_0.17-1_amd64.deb ... 325s Unpacking r-cran-rtsne (0.17-1) ... 325s Selecting previously unselected package r-cran-scattermore. 325s Preparing to unpack .../369-r-cran-scattermore_1.2-1_amd64.deb ... 325s Unpacking r-cran-scattermore (1.2-1) ... 325s Selecting previously unselected package r-cran-sctransform. 325s Preparing to unpack .../370-r-cran-sctransform_0.4.1-1_amd64.deb ... 325s Unpacking r-cran-sctransform (0.4.1-1) ... 325s Selecting previously unselected package r-cran-sp. 325s Preparing to unpack .../371-r-cran-sp_1%3a2.1-4+dfsg-1_amd64.deb ... 325s Unpacking r-cran-sp (1:2.1-4+dfsg-1) ... 325s Selecting previously unselected package r-cran-spam. 325s Preparing to unpack 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(1.39.0+dfsg-1) ... 329s Setting up r-cran-globals (0.16.3-1) ... 329s Setting up r-cran-rcurl (1.98-1.16+dfsg-1) ... 329s Setting up r-cran-spam (2.11-1-1) ... 329s Setting up r-cran-restfulr (0.0.15-1) ... 329s Setting up r-cran-gdata (3.0.1-1) ... 329s Setting up r-cran-vctrs (0.6.5-1) ... 329s Setting up r-cran-rcppeigen (0.3.4.0.2-1) ... 329s Setting up r-cran-pillar (1.10.1+dfsg-1) ... 329s Setting up r-cran-rcppannoy (0.0.22-1) ... 329s Setting up r-cran-openssl (2.2.0+dfsg-1) ... 329s Setting up r-bioc-s4arrays (1.6.0+dfsg-2) ... 329s Setting up r-cran-stringr (1.5.1-1) ... 329s Setting up r-cran-class (7.3-23-1) ... 329s Setting up r-bioc-biocparallel (1.40.0-2) ... 329s Setting up r-cran-modelmetrics (1.2.2.2-1build1) ... 329s Setting up r-cran-callr (3.7.6-1) ... 329s Setting up r-cran-matrixmodels (0.5-3-1) ... 329s Setting up r-bioc-rhtslib (3.2.0+dfsg-2) ... 329s Setting up r-cran-desc (1.4.3-1) ... 329s Setting up r-cran-munsell (0.5.1-1) ... 329s Setting up r-cran-tibble (3.2.1+dfsg-3) ... 329s Setting up r-cran-clock (0.7.1-1) ... 329s Setting up r-cran-sandwich (3.1-1-1) ... 329s Setting up r-cran-proc (1.18.5-1) ... 329s Setting up r-cran-fontawesome (0.5.3-1) ... 329s Setting up r-cran-survival (3.8-3-1) ... 329s Setting up r-cran-igraph (2.1.4-1) ... 329s Setting up r-bioc-biocio (1.16.0+dfsg-2) ... 329s Setting up r-cran-r.oo (1.27.0-1) ... 329s Setting up r-cran-rdpack (2.6.2-1) ... 329s Setting up r-cran-future (1.34.0+dfsg-1) ... 329s Setting up gfortran (4:14.1.0-2ubuntu1) ... 329s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 329s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 329s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 329s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 329s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 329s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... 329s Setting up r-cran-reshape2 (1.4.4-2build1) ... 329s Setting up r-cran-rsvd (1.0.5-1) ... 329s Setting up r-cran-future.apply (1.11.3+dfsg-1) ... 329s Setting up r-cran-timechange (0.3.0-1) ... 329s Setting up r-cran-th.data (1.1-3-1) ... 329s Setting up r-cran-httr (1.4.7+dfsg-1) ... 329s Setting up r-cran-gridextra (2.3-3build1) ... 329s Setting up r-cran-scales (1.3.0-1) ... 329s Setting up r-cran-memoise (2.0.1-1) ... 329s Setting up r-cran-lava (1.7.3+dfsg-2) ... 329s Setting up r-cran-promises (1.3.2+dfsg-1) ... 329s Setting up r-cran-purrr (1.0.2-1) ... 329s Setting up r-cran-e1071 (1.7-16-1) ... 329s Setting up r-cran-spatstat.data (3.1-4-1) ... 329s Setting up r-cran-fastdummies (1.7.5-1) ... 329s Setting up r-cran-multcomp (1.4-28-1) ... 329s Setting up r-cran-qqconf (1.3.2+dfsg-1) ... 329s Setting up r-cran-seuratobject (5.0.2-1) ... 329s Setting up r-cran-spatstat.geom (3.2-9-2) ... 329s Setting up r-bioc-xvector (0.46.0-2) ... 329s Setting up r-cran-pkgbuild (1.4.6-1) ... 329s Setting up r-cran-hardhat (1.4.0+dfsg-1) ... 329s Setting up r-cran-dplyr (1.1.4-4) ... 329s Setting up r-cran-rspectra (0.16-2-1) ... 329s Setting up r-cran-gplots (3.2.0-1) ... 329s Setting up r-cran-uwot (0.2.2-2) ... 329s Setting up r-cran-leiden (0.4.3.1+dfsg-1) ... 329s Setting up r-bioc-multtest (2.62.0-2) ... 329s Setting up r-cran-lubridate (1.9.4+dfsg-1) ... 329s Setting up r-cran-pkgload (1.4.0-1) ... 329s Setting up r-cran-r.utils (2.12.3-1) ... 329s Setting up r-cran-rocr (1.0-11-3) ... 329s Setting up r-base-dev (4.4.2-1build1) ... 329s Setting up r-cran-prodlim (2024.06.25-1) ... 329s Setting up r-cran-fitdistrplus (1.2-2-1) ... 329s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 329s Setting up r-bioc-sparsearray (1.6.1+dfsg-1) ... 329s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 329s Setting up r-cran-scattermore (1.2-1) ... 329s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 329s Setting up r-cran-rpart (4.1.24-1) ... 329s Setting up r-cran-spatstat.random (3.2-3-1) ... 329s Setting up r-cran-ipred (0.9-15-1) ... 329s Setting up r-cran-testthat (3.2.3-1) ... 329s Setting up r-bioc-genomeinfodb (1.42.1+dfsg-2) ... 329s Setting up r-cran-bslib (0.8.0+dfsg-1) ... 329s Setting up r-cran-spatstat.explore (3.2-7-1) ... 329s Setting up r-cran-ggrepel (0.9.6-1) ... 329s Setting up r-cran-tidyr (1.3.1-1) ... 329s Setting up r-cran-recipes (1.1.0+dfsg-1) ... 329s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 329s Setting up r-cran-mutoss (0.1-13-1) ... 329s Setting up r-cran-ggridges (0.5.6-1) ... 329s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 329s Setting up r-cran-cowplot (1.1.3+dfsg-1) ... 329s Setting up r-cran-sctransform (0.4.1-1) ... 329s Setting up r-cran-patchwork (1.3.0-1) ... 329s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 329s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 329s Setting up r-cran-caret (7.0-1+dfsg-1) ... 329s Setting up r-cran-shiny (1.9.1+dfsg-1) ... 329s Setting up r-cran-shinyjs (2.1.0-1) ... 329s Setting up r-cran-miniui (0.1.1.1-3build1) ... 329s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 329s Setting up r-cran-conquer (1.3.3-1) ... 329s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... 329s Setting up r-cran-crosstalk (1.2.1+dfsg-1) ... 329s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 329s Setting up r-cran-quantreg (6.00-1) ... 329s Setting up r-cran-sn (2.1.1-2) ... 329s Setting up r-bioc-deseq2 (1.46.0+dfsg-2) ... 329s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 329s Setting up r-cran-colourpicker (1.3.0+dfsg-1) ... 329s Setting up r-cran-tfisher (0.2.0-3) ... 329s Setting up r-bioc-genomicalignments (1.42.0-2) ... 329s Setting up r-cran-metap (1.11-2) ... 329s Setting up r-bioc-rtracklayer (1.66.0-2) ... 329s Setting up r-cran-plotly (4.10.4+dfsg-2) ... 329s Setting up r-cran-mixtools (2.0.0-1) ... 329s Setting up r-cran-seurat (5.0.1-1) ... 329s Processing triggers for man-db (2.13.0-1) ... 331s Processing triggers for install-info (7.1.1-1) ... 331s Processing triggers for libc-bin (2.40-4ubuntu1) ... 332s autopkgtest [19:30:20]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 332s autopkgtest [19:30:20]: test pkg-r-autopkgtest: [----------------------- 332s Test: Try to load the R library Seurat 332s 332s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 332s Copyright (C) 2024 The R Foundation for Statistical Computing 332s Platform: x86_64-pc-linux-gnu 332s 332s R is free software and comes with ABSOLUTELY NO WARRANTY. 332s You are welcome to redistribute it under certain conditions. 332s Type 'license()' or 'licence()' for distribution details. 332s 332s R is a collaborative project with many contributors. 332s Type 'contributors()' for more information and 332s 'citation()' on how to cite R or R packages in publications. 332s 332s Type 'demo()' for some demos, 'help()' for on-line help, or 332s 'help.start()' for an HTML browser interface to help. 332s Type 'q()' to quit R. 332s 333s > library('Seurat') 333s Loading required package: SeuratObject 333s Loading required package: sp 334s ‘SeuratObject’ was built under R 4.4.1 but the current version is 334s 4.4.2; it is recomended that you reinstall ‘SeuratObject’ as the ABI 334s for R may have changed 334s ‘SeuratObject’ was built with package ‘Matrix’ 1.7.0 but the current 334s version is 1.7.2; it is recomended that you reinstall ‘SeuratObject’ as 334s the ABI for ‘Matrix’ may have changed 334s 334s Attaching package: ‘SeuratObject’ 334s 334s The following objects are masked from ‘package:base’: 334s 334s intersect, t 334s 336s > 336s > 336s Other tests are currently unsupported! 336s They will be progressively added. 337s autopkgtest [19:30:25]: test pkg-r-autopkgtest: -----------------------] 337s pkg-r-autopkgtest PASS 337s autopkgtest [19:30:25]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 337s autopkgtest [19:30:25]: @@@@@@@@@@@@@@@@@@@@ summary 337s run-unit-test PASS 337s pkg-r-autopkgtest PASS 359s nova [W] Skipping flock for amd64 359s Creating nova instance adt-plucky-amd64-r-cran-seurat-20250203-192448-juju-7f2275-prod-proposed-migration-environment-20-c4db2358-357b-4764-8226-71d60a31cf04 from image adt/ubuntu-plucky-amd64-server-20250203.img (UUID 15dc8987-472a-4c3f-84bb-7526fd9e1ef2)... 359s nova [W] Timed out waiting for b92c6946-d56c-46d3-9066-ff85c08d4a3d to get deleted. 359s nova [W] Skipping flock for amd64 359s Creating nova instance adt-plucky-amd64-r-cran-seurat-20250203-192448-juju-7f2275-prod-proposed-migration-environment-20-c4db2358-357b-4764-8226-71d60a31cf04 from image adt/ubuntu-plucky-amd64-server-20250203.img (UUID 15dc8987-472a-4c3f-84bb-7526fd9e1ef2)... 359s nova [W] Timed out waiting for 0b38b2f8-5721-4788-8a29-3f7847745b02 to get deleted.