0s autopkgtest [15:30:39]: starting date and time: 2025-01-17 15:30:39+0000 0s autopkgtest [15:30:39]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [15:30:39]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.sx1c0zh8/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-bioc-genomicranges,src:r-bioc-biocgenerics,src:r-cran-seurat --apt-upgrade r-cran-seurat --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-bioc-genomicranges/1.58.0+dfsg-2 r-bioc-biocgenerics/0.52.0-2 r-cran-seurat/5.1.0-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-15.secgroup --name adt-plucky-amd64-r-cran-seurat-20250117-153039-juju-7f2275-prod-proposed-migration-environment-15-cada56ed-0770-4e78-a123-8333d2d60c87 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 52s autopkgtest [15:31:31]: testbed dpkg architecture: amd64 52s autopkgtest [15:31:31]: testbed apt version: 2.9.18 53s autopkgtest [15:31:32]: @@@@@@@@@@@@@@@@@@@@ test bed setup 53s autopkgtest [15:31:32]: testbed release detected to be: None 54s autopkgtest [15:31:33]: updating testbed package index (apt update) 54s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 54s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 54s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 54s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 54s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [178 kB] 55s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [868 kB] 55s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.1 kB] 55s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 55s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [228 kB] 55s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [331 kB] 55s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [40.1 kB] 55s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/restricted i386 Packages [2408 B] 55s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [1095 kB] 55s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [468 kB] 55s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [24.9 kB] 55s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [4444 B] 55s Fetched 3337 kB in 1s (3357 kB/s) 56s Reading package lists... 56s Reading package lists... 57s Building dependency tree... 57s Reading state information... 57s Calculating upgrade... 57s The following packages will be upgraded: 57s libgudev-1.0-0 usb.ids 57s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 57s Need to get 239 kB of archives. 57s After this operation, 0 B of additional disk space will be used. 57s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 usb.ids all 2025.01.14-1 [223 kB] 58s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libgudev-1.0-0 amd64 1:238-6 [15.8 kB] 58s Fetched 239 kB in 0s (500 kB/s) 58s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75824 files and directories currently installed.) 58s Preparing to unpack .../usb.ids_2025.01.14-1_all.deb ... 58s Unpacking usb.ids (2025.01.14-1) over (2024.12.04-1) ... 58s Preparing to unpack .../libgudev-1.0-0_1%3a238-6_amd64.deb ... 58s Unpacking libgudev-1.0-0:amd64 (1:238-6) over (1:238-5ubuntu1) ... 58s Setting up usb.ids (2025.01.14-1) ... 58s Setting up libgudev-1.0-0:amd64 (1:238-6) ... 58s Processing triggers for libc-bin (2.40-4ubuntu1) ... 58s Reading package lists... 59s Building dependency tree... 59s Reading state information... 59s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 59s autopkgtest [15:31:38]: upgrading testbed (apt dist-upgrade and autopurge) 59s Reading package lists... 60s Building dependency tree... 60s Reading state information... 60s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 60s Starting 2 pkgProblemResolver with broken count: 0 60s Done 61s Entering ResolveByKeep 61s 61s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 61s Reading package lists... 62s Building dependency tree... 62s Reading state information... 62s Starting pkgProblemResolver with broken count: 0 62s Starting 2 pkgProblemResolver with broken count: 0 62s Done 62s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 65s autopkgtest [15:31:44]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 13:41:20 UTC 2024 65s autopkgtest [15:31:44]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-seurat 67s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-seurat 5.1.0-1 (dsc) [3385 B] 67s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-seurat 5.1.0-1 (tar) [2064 kB] 67s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-seurat 5.1.0-1 (diff) [4724 B] 67s gpgv: Signature made Tue Sep 10 23:46:06 2024 UTC 67s gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 67s gpgv: issuer "plessy@debian.org" 67s gpgv: Can't check signature: No public key 67s dpkg-source: warning: cannot verify inline signature for ./r-cran-seurat_5.1.0-1.dsc: no acceptable signature found 67s autopkgtest [15:31:46]: testing package r-cran-seurat version 5.1.0-1 68s autopkgtest [15:31:47]: build not needed 71s autopkgtest [15:31:50]: test run-unit-test: preparing testbed 71s Reading package lists... 71s Building dependency tree... 71s Reading state information... 71s Starting pkgProblemResolver with broken count: 13 71s Starting 2 pkgProblemResolver with broken count: 13 71s Investigating (0) r-bioc-s4vectors:amd64 < none -> 0.42.1+dfsg-2 @un puN Ib > 71s Broken r-bioc-s4vectors:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 71s Considering r-bioc-biocgenerics:amd64 58 as a solution to r-bioc-s4vectors:amd64 37 71s Re-Instated r-bioc-biocgenerics:amd64 71s Investigating (0) r-bioc-iranges:amd64 < none -> 2.38.1-1 @un puN Ib > 71s Broken r-bioc-iranges:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 71s Considering r-bioc-biocgenerics:amd64 37 as a solution to r-bioc-iranges:amd64 26 71s Investigating (0) r-bioc-genomeinfodb:amd64 < none -> 1.40.1+dfsg-1 @un puN Ib > 71s Broken r-bioc-genomeinfodb:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 71s Considering r-bioc-biocgenerics:amd64 37 as a solution to r-bioc-genomeinfodb:amd64 13 71s Broken r-bioc-genomeinfodb:amd64 Depends on r-bioc-ucsc.utils:amd64 < none | 1.0.0+ds-2 @un uH > (> 1.0.0+ds-1) 71s Considering r-bioc-ucsc.utils:amd64 0 as a solution to r-bioc-genomeinfodb:amd64 13 71s Reinst Failed because of protected r-bioc-biocgenerics:amd64 71s Considering r-bioc-ucsc.utils:amd64 0 as a solution to r-bioc-genomeinfodb:amd64 13 71s Broken r-bioc-genomeinfodb:amd64 Depends on r-bioc-genomeinfodbdata:amd64 < none | 1.2.13-2 @un uH > (>= 1.2.12) 71s Considering r-bioc-genomeinfodbdata:amd64 0 as a solution to r-bioc-genomeinfodb:amd64 13 71s Re-Instated r-bioc-genomeinfodbdata:amd64 71s Investigating (0) r-bioc-biobase:amd64 < none -> 2.64.0-4 @un puN Ib > 71s Broken r-bioc-biobase:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 71s Considering r-bioc-biocgenerics:amd64 37 as a solution to r-bioc-biobase:amd64 10 71s Investigating (0) r-bioc-xvector:amd64 < none -> 0.44.0-1 @un puN Ib > 71s Broken r-bioc-xvector:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 71s Considering r-bioc-biocgenerics:amd64 37 as a solution to r-bioc-xvector:amd64 7 71s Broken r-bioc-xvector:amd64 Depends on r-bioc-zlibbioc:amd64 < none | 1.50.0+dfsg-2 @un uH > (>= 1.50.0) 71s Considering r-bioc-zlibbioc:amd64 0 as a solution to r-bioc-xvector:amd64 7 71s Reinst Failed because of protected r-bioc-biocgenerics:amd64 71s Considering r-bioc-zlibbioc:amd64 0 as a solution to r-bioc-xvector:amd64 7 71s Investigating (0) r-bioc-delayedarray:amd64 < none -> 0.30.1+dfsg-1 @un puN Ib > 71s Broken r-bioc-delayedarray:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 71s Considering r-bioc-biocgenerics:amd64 37 as a solution to r-bioc-delayedarray:amd64 7 71s Broken r-bioc-delayedarray:amd64 Depends on r-bioc-matrixgenerics:amd64 < none | 1.16.0-2 @un uH > (>= 1.16.0) 71s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-delayedarray:amd64 7 71s Reinst Failed because of protected r-bioc-biocgenerics:amd64 71s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-delayedarray:amd64 7 71s Broken r-bioc-delayedarray:amd64 Depends on r-bioc-s4arrays:amd64 < none | 1.4.1+dfsg-1 @un uH > (>= 1.4.1) 71s Considering r-bioc-s4arrays:amd64 0 as a solution to r-bioc-delayedarray:amd64 7 71s Reinst Failed because of protected r-bioc-biocgenerics:amd64 71s Considering r-bioc-s4arrays:amd64 0 as a solution to r-bioc-delayedarray:amd64 7 71s Broken r-bioc-delayedarray:amd64 Depends on r-bioc-sparsearray:amd64 < none | 1.4.8+dfsg-1 @un uH > (>= 1.4.8) 71s Considering r-bioc-sparsearray:amd64 0 as a solution to r-bioc-delayedarray:amd64 7 71s Reinst Failed because of protected r-bioc-biocgenerics:amd64 71s Considering r-bioc-sparsearray:amd64 0 as a solution to r-bioc-delayedarray:amd64 7 71s Investigating (0) r-bioc-summarizedexperiment:amd64 < none -> 1.34.0+dfsg-1 @un puN Ib > 71s Broken r-bioc-summarizedexperiment:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 71s Considering r-bioc-biocgenerics:amd64 37 as a solution to r-bioc-summarizedexperiment:amd64 5 71s Broken r-bioc-summarizedexperiment:amd64 Depends on r-bioc-matrixgenerics:amd64 < none | 1.16.0-2 @un uH > (>= 1.16.0) 71s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-summarizedexperiment:amd64 5 71s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-summarizedexperiment:amd64 5 71s Broken r-bioc-summarizedexperiment:amd64 Depends on r-bioc-s4arrays:amd64 < none | 1.4.1+dfsg-1 @un uH > (>= 1.4.1) 71s Considering r-bioc-s4arrays:amd64 0 as a solution to r-bioc-summarizedexperiment:amd64 5 71s Considering r-bioc-s4arrays:amd64 0 as a solution to r-bioc-summarizedexperiment:amd64 5 71s Investigating (0) r-bioc-limma:amd64 < none -> 3.60.6+dfsg-1 @un puN Ib > 71s Broken r-bioc-limma:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 71s Considering r-bioc-biocgenerics:amd64 37 as a solution to r-bioc-limma:amd64 3 71s Broken r-bioc-limma:amd64 Depends on r-cran-statmod:amd64 < none | 1.5.0-1 @un uH > 71s Considering r-cran-statmod:amd64 1 as a solution to r-bioc-limma:amd64 3 71s Re-Instated r-cran-statmod:amd64 71s Investigating (0) r-bioc-rtracklayer:amd64 < none -> 1.64.0-1 @un puN Ib > 71s Broken r-bioc-rtracklayer:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 71s Considering r-bioc-biocgenerics:amd64 37 as a solution to r-bioc-rtracklayer:amd64 1 71s Broken r-bioc-rtracklayer:amd64 Depends on r-cran-xml:amd64 < none | 3.99-0.18-1 @un uH > (>= 1.98-0) 71s Considering r-cran-xml:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 71s Re-Instated r-cran-xml:amd64 71s Broken r-bioc-rtracklayer:amd64 Depends on r-bioc-biostrings:amd64 < none | 2.72.1+dfsg-1 @un uH > (>= 2.72.1) 71s Considering r-bioc-biostrings:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 71s Reinst Failed because of protected r-bioc-biocgenerics:amd64 71s Considering r-bioc-biostrings:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 71s Broken r-bioc-rtracklayer:amd64 Depends on r-bioc-zlibbioc:amd64 < none | 1.50.0+dfsg-2 @un uH > (>= 1.50.0) 71s Considering r-bioc-zlibbioc:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 71s Considering r-bioc-zlibbioc:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 71s Broken r-bioc-rtracklayer:amd64 Depends on r-bioc-rsamtools:amd64 < none | 2.20.0+dfsg-1 @un uH > (>= 2.20.0) 71s Considering r-bioc-rsamtools:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 71s Reinst Failed because of protected r-bioc-biocgenerics:amd64 71s Considering r-bioc-rsamtools:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 71s Broken r-bioc-rtracklayer:amd64 Depends on r-bioc-genomicalignments:amd64 < none | 1.40.0-1 @un uH > (>= 1.40.0) 71s Considering r-bioc-genomicalignments:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 71s Reinst Failed because of protected r-bioc-biocgenerics:amd64 71s Considering r-bioc-genomicalignments:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 71s Broken r-bioc-rtracklayer:amd64 Depends on r-bioc-biocio:amd64 < none | 1.14.0+dfsg-1 @un uH > (>= 1.14.0) 71s Considering r-bioc-biocio:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 71s Reinst Failed because of protected r-bioc-biocgenerics:amd64 71s Considering r-bioc-biocio:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 71s Broken r-bioc-rtracklayer:amd64 Depends on r-cran-restfulr:amd64 < none | 0.0.15-1 @un uH > (>= 0.0.13) 71s Considering r-cran-restfulr:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 71s Re-Instated r-cran-rcurl:amd64 71s Re-Instated r-cran-rjson:amd64 71s Re-Instated r-cran-restfulr:amd64 71s Investigating (0) r-bioc-deseq2:amd64 < none -> 1.44.0+dfsg-1 @un puN Ib > 71s Broken r-bioc-deseq2:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 71s Considering r-bioc-biocgenerics:amd64 37 as a solution to r-bioc-deseq2:amd64 1 71s Broken r-bioc-deseq2:amd64 Depends on r-bioc-biocparallel:amd64 < none | 1.38.0-2 @un uH > (>= 1.38.0) 71s Considering r-bioc-biocparallel:amd64 0 as a solution to r-bioc-deseq2:amd64 1 71s Reinst Failed because of protected r-bioc-biocgenerics:amd64 71s Considering r-bioc-biocparallel:amd64 0 as a solution to r-bioc-deseq2:amd64 1 71s Broken r-bioc-deseq2:amd64 Depends on r-cran-locfit:amd64 < none | 1.5-9.10-1 @un uH > 71s Considering r-cran-locfit:amd64 2 as a solution to r-bioc-deseq2:amd64 1 71s Re-Instated r-cran-locfit:amd64 71s Broken r-bioc-deseq2:amd64 Depends on r-bioc-matrixgenerics:amd64 < none | 1.16.0-2 @un uH > (>= 1.16.0) 71s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-deseq2:amd64 1 71s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-deseq2:amd64 1 71s Investigating (0) r-bioc-singlecellexperiment:amd64 < none -> 1.26.0+ds-1 @un puN Ib > 71s Broken r-bioc-singlecellexperiment:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 71s Considering r-bioc-biocgenerics:amd64 37 as a solution to r-bioc-singlecellexperiment:amd64 1 71s Investigating (0) r-bioc-monocle:amd64 < none -> 2.32.0-1 @un puN Ib > 71s Broken r-bioc-monocle:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 71s Considering r-bioc-biocgenerics:amd64 37 as a solution to r-bioc-monocle:amd64 1 71s Broken r-bioc-monocle:amd64 Depends on r-cran-ddrtree:amd64 < none | 0.1.5-2 @un uH > (>= 0.1.4) 71s Considering r-cran-ddrtree:amd64 0 as a solution to r-bioc-monocle:amd64 1 71s Re-Instated r-cran-ddrtree:amd64 71s Broken r-bioc-monocle:amd64 Depends on r-bioc-hsmmsinglecell:amd64 < none | 1.24.0-1 @un uH > (>= 0.101.5) 71s Considering r-bioc-hsmmsinglecell:amd64 0 as a solution to r-bioc-monocle:amd64 1 71s Reinst Failed because of protected r-bioc-biocgenerics:amd64 71s Considering r-bioc-hsmmsinglecell:amd64 0 as a solution to r-bioc-monocle:amd64 1 71s Broken r-bioc-monocle:amd64 Depends on r-cran-combinat:amd64 < none | 0.0-8-7build1 @un uH > 71s Considering r-cran-combinat:amd64 1 as a solution to r-bioc-monocle:amd64 1 71s Re-Instated r-cran-combinat:amd64 71s Broken r-bioc-monocle:amd64 Depends on r-cran-fastica:amd64 < none | 1.2-7-1 @un uH > 71s Considering r-cran-fastica:amd64 3 as a solution to r-bioc-monocle:amd64 1 71s Re-Instated r-cran-fastica:amd64 71s Broken r-bioc-monocle:amd64 Depends on r-cran-leidenbase:amd64 < none | 0.1.27-1 @un uH > (>= 0.1.9) 71s Considering r-cran-leidenbase:amd64 0 as a solution to r-bioc-monocle:amd64 1 71s Re-Instated r-cran-leidenbase:amd64 71s Broken r-bioc-monocle:amd64 Depends on r-cran-pheatmap:amd64 < none | 1.0.12-2build1 @un uH > 71s Considering r-cran-pheatmap:amd64 1 as a solution to r-bioc-monocle:amd64 1 71s Re-Instated r-cran-pheatmap:amd64 71s Broken r-bioc-monocle:amd64 Depends on r-cran-slam:amd64 < none | 0.1-55-1 @un uH > 71s Considering r-cran-slam:amd64 1 as a solution to r-bioc-monocle:amd64 1 71s Re-Instated r-cran-slam:amd64 71s Broken r-bioc-monocle:amd64 Depends on r-cran-viridis:amd64 < none | 0.6.5-1 @un uH > 71s Considering r-cran-viridis:amd64 2 as a solution to r-bioc-monocle:amd64 1 71s Re-Instated r-cran-viridis:amd64 71s Broken r-bioc-monocle:amd64 Depends on r-bioc-biocviews:amd64 < none | 1.72.0-1 @un uH > 71s Considering r-bioc-biocviews:amd64 1 as a solution to r-bioc-monocle:amd64 1 71s Reinst Failed because of protected r-bioc-biocgenerics:amd64 71s Considering r-bioc-biocviews:amd64 1 as a solution to r-bioc-monocle:amd64 1 71s Investigating (0) r-bioc-multtest:amd64 < none -> 2.60.0-1 @un puN Ib > 71s Broken r-bioc-multtest:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 71s Considering r-bioc-biocgenerics:amd64 37 as a solution to r-bioc-multtest:amd64 0 71s Done 71s Some packages could not be installed. This may mean that you have 71s requested an impossible situation or if you are using the unstable 71s distribution that some required packages have not yet been created 71s or been moved out of Incoming. 71s The following information may help to resolve the situation: 71s 71s The following packages have unmet dependencies: 71s r-bioc-biobase : Depends: r-api-bioc-3.19 71s r-bioc-delayedarray : Depends: r-api-bioc-3.19 71s Depends: r-bioc-matrixgenerics (>= 1.16.0) but it is not going to be installed 71s Depends: r-bioc-s4arrays (>= 1.4.1) but it is not going to be installed 71s Depends: r-bioc-sparsearray (>= 1.4.8) but it is not going to be installed 71s r-bioc-deseq2 : Depends: r-api-bioc-3.19 71s Depends: r-bioc-biocparallel (>= 1.38.0) but it is not going to be installed 71s Depends: r-bioc-matrixgenerics (>= 1.16.0) but it is not going to be installed 71s r-bioc-genomeinfodb : Depends: r-api-bioc-3.19 71s Depends: r-bioc-ucsc.utils (> 1.0.0+ds-1) but it is not going to be installed 71s r-bioc-iranges : Depends: r-api-bioc-3.19 71s r-bioc-limma : Depends: r-api-bioc-3.19 71s r-bioc-monocle : Depends: r-api-bioc-3.19 71s Depends: r-bioc-hsmmsinglecell (>= 0.101.5) but it is not going to be installed 71s Depends: r-bioc-biocviews but it is not going to be installed 71s r-bioc-multtest : Depends: r-api-bioc-3.19 71s r-bioc-rtracklayer : Depends: r-api-bioc-3.19 71s Depends: r-bioc-biostrings (>= 2.72.1) but it is not going to be installed 71s Depends: r-bioc-zlibbioc (>= 1.50.0) but it is not going to be installed 71s Depends: r-bioc-rsamtools (>= 2.20.0) but it is not going to be installed 71s Depends: r-bioc-genomicalignments (>= 1.40.0) but it is not going to be installed 71s Depends: r-bioc-biocio (>= 1.14.0) but it is not going to be installed 71s r-bioc-s4vectors : Depends: r-api-bioc-3.19 71s r-bioc-singlecellexperiment : Depends: r-api-bioc-3.19 71s r-bioc-summarizedexperiment : Depends: r-api-bioc-3.19 71s Depends: r-bioc-matrixgenerics (>= 1.16.0) but it is not going to be installed 71s Depends: r-bioc-s4arrays (>= 1.4.1) but it is not going to be installed 71s r-bioc-xvector : Depends: r-api-bioc-3.19 71s Depends: r-bioc-zlibbioc (>= 1.50.0) but it is not going to be installed 71s E: Unable to correct problems, you have held broken packages. 71s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from plucky-proposed 72s Reading package lists... 72s Building dependency tree... 72s Reading state information... 72s Starting pkgProblemResolver with broken count: 0 72s Starting 2 pkgProblemResolver with broken count: 0 72s Done 73s The following NEW packages will be installed: 73s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 73s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax 73s javascript-common libaec0 libamd3 libasan8 libblas3 libboost-dev 73s libboost1.83-dev libcairo2 libcolamd3 libdatrie1 libdeflate0 73s libfftw3-double3 libfontconfig1 libgcc-14-dev libgfortran5 libglpk40 73s libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-103-1t64 libhdf5-hl-100t64 73s libhwasan0 libice6 libitm1 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap 73s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 73s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 73s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 73s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack3 73s liblerc4 liblsan0 libltdl7 liblua5.4-0 libpango-1.0-0 libpangocairo-1.0-0 73s libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 libquadmath0 73s libsharpyuv0 libsm6 libstdc++-14-dev libsuitesparseconfig7 libsz2 libtcl8.6 73s libthai-data libthai0 libtiff6 libtk8.6 libtsan2 libubsan1 libwebp7 73s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 littler 73s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 73s r-base-core r-bioc-biobase r-bioc-biocgenerics r-bioc-biocio 73s r-bioc-biocparallel r-bioc-biocviews r-bioc-biostrings r-bioc-delayedarray 73s r-bioc-deseq2 r-bioc-genomeinfodb r-bioc-genomeinfodbdata 73s r-bioc-genomicalignments r-bioc-genomicranges r-bioc-graph 73s r-bioc-hsmmsinglecell r-bioc-iranges r-bioc-limma r-bioc-matrixgenerics 73s r-bioc-monocle r-bioc-multtest r-bioc-rbgl r-bioc-rhtslib r-bioc-rsamtools 73s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors 73s r-bioc-singlecellexperiment r-bioc-sparsearray r-bioc-summarizedexperiment 73s r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-ape 73s r-cran-askpass r-cran-base64enc r-cran-beeswarm r-cran-bh r-cran-biocmanager 73s r-cran-bit r-cran-bit64 r-cran-bitops r-cran-brio r-cran-bslib r-cran-cachem 73s r-cran-cairo r-cran-callr r-cran-caret r-cran-catools r-cran-class 73s r-cran-cli r-cran-clock r-cran-cluster r-cran-codetools r-cran-colorspace 73s r-cran-colourpicker r-cran-combinat r-cran-commonmark r-cran-conquer 73s r-cran-cowplot r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl 73s r-cran-data.table r-cran-ddrtree r-cran-deldir r-cran-deoptimr r-cran-desc 73s r-cran-diagram r-cran-diffobj r-cran-digest r-cran-dotcall64 r-cran-dplyr 73s r-cran-dqrng r-cran-e1071 r-cran-evaluate r-cran-fansi r-cran-farver 73s r-cran-fastdummies r-cran-fastica r-cran-fastmap r-cran-fitdistrplus 73s r-cran-fnn r-cran-fontawesome r-cran-foreach r-cran-formatr r-cran-fs 73s r-cran-futile.logger r-cran-futile.options r-cran-future r-cran-future.apply 73s r-cran-gdata r-cran-generics r-cran-ggbeeswarm r-cran-ggplot2 r-cran-ggrastr 73s r-cran-ggrepel r-cran-ggridges r-cran-globals r-cran-glue r-cran-goftest 73s r-cran-gower r-cran-gplots r-cran-gridextra r-cran-gtable r-cran-gtools 73s r-cran-hardhat r-cran-hdf5r r-cran-here r-cran-highr r-cran-htmltools 73s r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-ica r-cran-igraph 73s r-cran-ipred r-cran-irlba r-cran-isoband r-cran-iterators r-cran-jquerylib 73s r-cran-jsonlite r-cran-kernlab r-cran-kernsmooth r-cran-knitr 73s r-cran-labeling r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lava 73s r-cran-lazyeval r-cran-leiden r-cran-leidenbase r-cran-lifecycle 73s r-cran-listenv r-cran-littler r-cran-lmtest r-cran-locfit r-cran-lubridate 73s r-cran-magrittr r-cran-mass r-cran-mathjaxr r-cran-matrix 73s r-cran-matrixmodels r-cran-matrixstats r-cran-memoise r-cran-metap 73s r-cran-mgcv r-cran-mime r-cran-miniui r-cran-mixtools r-cran-mnormt 73s r-cran-modelmetrics r-cran-multcomp r-cran-munsell r-cran-mutoss 73s r-cran-mvtnorm r-cran-nlme r-cran-nnet r-cran-numderiv r-cran-openssl 73s r-cran-parallelly r-cran-patchwork r-cran-pbapply r-cran-pheatmap 73s r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 73s r-cran-pkgload r-cran-plotly r-cran-plotrix r-cran-plyr r-cran-png 73s r-cran-polyclip r-cran-praise r-cran-proc r-cran-processx r-cran-prodlim 73s r-cran-progressr r-cran-promises r-cran-proxy r-cran-ps r-cran-purrr 73s r-cran-qqconf r-cran-quantreg r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils 73s r-cran-r6 r-cran-ragg r-cran-rann r-cran-rappdirs r-cran-rbibutils 73s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppannoy r-cran-rcpparmadillo 73s r-cran-rcppeigen r-cran-rcpphnsw r-cran-rcppprogress r-cran-rcpptoml 73s r-cran-rcurl r-cran-rdpack r-cran-recipes r-cran-reshape2 r-cran-restfulr 73s r-cran-reticulate r-cran-rjson r-cran-rlang r-cran-rmarkdown 73s r-cran-robustbase r-cran-rocr r-cran-rpart r-cran-rprojroot r-cran-rspectra 73s r-cran-rsvd r-cran-rtsne r-cran-runit r-cran-sandwich r-cran-sass 73s r-cran-scales r-cran-scattermore r-cran-sctransform r-cran-segmented 73s r-cran-seurat r-cran-seuratobject r-cran-shape r-cran-shiny r-cran-shinyjs 73s r-cran-sitmo r-cran-slam r-cran-sn r-cran-snow r-cran-sourcetools r-cran-sp 73s r-cran-spam r-cran-sparsem r-cran-spatstat.data r-cran-spatstat.explore 73s r-cran-spatstat.geom r-cran-spatstat.random r-cran-spatstat.sparse 73s r-cran-spatstat.utils r-cran-squarem r-cran-statmod r-cran-stringi 73s r-cran-stringr r-cran-survival r-cran-sys r-cran-systemfonts r-cran-tensor 73s r-cran-testthat r-cran-textshaping r-cran-tfisher r-cran-th.data 73s r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-timechange 73s r-cran-timedate r-cran-tinytex r-cran-tzdb r-cran-utf8 r-cran-uwot 73s r-cran-vctrs r-cran-vgam r-cran-vipor r-cran-viridis r-cran-viridislite 73s r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml r-cran-xtable r-cran-yaml 73s r-cran-zoo unzip x11-common xdg-utils zip zlib1g-dev 73s The following packages will be upgraded: 73s gcc-14-base libatomic1 libgcc-s1 libstdc++6 73s 4 upgraded, 371 newly installed, 0 to remove and 126 not upgraded. 73s Need to get 414 MB of archives. 73s After this operation, 1094 MB of additional disk space will be used. 73s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 gcc-14-base amd64 14.2.0-13ubuntu1 [53.0 kB] 73s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libstdc++6 amd64 14.2.0-13ubuntu1 [787 kB] 73s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libatomic1 amd64 14.2.0-13ubuntu1 [10.3 kB] 73s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libgcc-s1 amd64 14.2.0-13ubuntu1 [78.2 kB] 73s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 74s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 74s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB] 74s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB] 74s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB] 74s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 74s Get:11 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 74s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 74s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 11+nmu1 [5936 B] 74s Get:14 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 74s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libgomp1 amd64 14.2.0-13ubuntu1 [148 kB] 74s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libsuitesparseconfig7 amd64 1:7.8.3+dfsg-2 [13.4 kB] 74s Get:17 http://ftpmaster.internal/ubuntu plucky/universe amd64 libamd3 amd64 1:7.8.3+dfsg-2 [31.1 kB] 74s Get:18 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libasan8 amd64 14.2.0-13ubuntu1 [2998 kB] 74s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-4 [332 kB] 74s Get:20 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libitm1 amd64 14.2.0-13ubuntu1 [29.1 kB] 74s Get:21 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 liblsan0 amd64 14.2.0-13ubuntu1 [1317 kB] 74s Get:22 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libtsan2 amd64 14.2.0-13ubuntu1 [2732 kB] 74s Get:23 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libubsan1 amd64 14.2.0-13ubuntu1 [1177 kB] 74s Get:24 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libhwasan0 amd64 14.2.0-13ubuntu1 [1634 kB] 74s Get:25 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libquadmath0 amd64 14.2.0-13ubuntu1 [153 kB] 74s Get:26 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libgcc-14-dev amd64 14.2.0-13ubuntu1 [2815 kB] 74s Get:27 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libstdc++-14-dev amd64 14.2.0-13ubuntu1 [2508 kB] 74s Get:28 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libboost1.83-dev amd64 1.83.0-4ubuntu2 [10.7 MB] 74s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost-dev amd64 1.83.0.2ubuntu1 [4468 B] 74s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 74s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 74s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 74s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 74s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 74s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libcolamd3 amd64 1:7.8.3+dfsg-2 [19.5 kB] 74s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 74s Get:37 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB] 75s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libfftw3-double3 amd64 3.3.10-2fakesync1build1 [839 kB] 75s Get:39 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libgfortran5 amd64 14.2.0-13ubuntu1 [909 kB] 75s Get:40 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libltdl7 amd64 2.5.4-2 [46.0 kB] 75s Get:41 http://ftpmaster.internal/ubuntu plucky/universe amd64 libglpk40 amd64 5.0-1build2 [369 kB] 75s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 75s Get:43 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB] 75s Get:44 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 75s Get:45 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-103-1t64 amd64 1.10.10+repack-5ubuntu1 [1367 kB] 75s Get:46 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-5ubuntu1 [59.5 kB] 75s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 75s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 75s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 75s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 75s Get:51 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 75s Get:52 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 75s Get:53 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 75s Get:54 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 75s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 75s Get:56 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 75s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 75s Get:58 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 75s Get:59 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 75s Get:60 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 75s Get:61 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 75s Get:62 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 75s Get:63 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 75s Get:64 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 75s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-4 [3177 kB] 75s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 75s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 liblua5.4-0 amd64 5.4.7-1 [196 kB] 75s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 75s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 75s Get:70 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpango-1.0-0 amd64 1.56.0-3 [255 kB] 75s Get:71 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpangoft2-1.0-0 amd64 1.56.0-3 [52.5 kB] 75s Get:72 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpangocairo-1.0-0 amd64 1.56.0-3 [29.1 kB] 75s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB] 75s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB] 75s Get:75 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 75s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 75s Get:77 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB] 75s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 75s Get:79 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 75s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 75s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 75s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 75s Get:83 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB] 75s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 75s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu1 [185 kB] 75s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 75s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 75s Get:88 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-base-core amd64 4.4.2-1build1 [28.9 MB] 76s Get:89 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-2 [96.6 kB] 76s Get:90 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-2 [2554 B] 76s Get:91 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 76s Get:92 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 76s Get:93 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 76s Get:94 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 76s Get:95 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc amd64 3.1.11.1+ds-2 [27.2 MB] 77s Get:96 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 77s Get:97 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-biobase amd64 2.66.0-2 [2332 kB] 77s Get:98 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2065 kB] 77s Get:99 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 77s Get:100 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-formatr all 1.14-2 [152 kB] 77s Get:101 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 77s Get:102 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 77s Get:103 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 77s Get:104 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 77s Get:105 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-codetools all 0.2-20-1 [90.5 kB] 77s Get:106 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bh all 1.84.0-1 [5962 B] 77s Get:107 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cpp11 all 0.5.0-1 [221 kB] 77s Get:108 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-biocparallel amd64 1.40.0-2 [1337 kB] 77s Get:109 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-graph amd64 1.84.1-1 [1298 kB] 77s Get:110 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-rbgl amd64 1.82.0+dfsg-2 [588 kB] 77s Get:111 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xml amd64 3.99-0.18-1 [1748 kB] 77s Get:112 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bitops amd64 1.0-8-1 [30.3 kB] 77s Get:113 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcurl amd64 1.98-1.16+dfsg-1 [807 kB] 77s Get:114 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-runit all 0.4.33-1 [377 kB] 77s Get:115 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 77s Get:116 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-biocviews all 1.74.0-2 [670 kB] 77s Get:117 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-iranges amd64 2.40.1-2 [2310 kB] 78s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 78s Get:119 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 78s Get:120 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-xvector amd64 0.46.0-2 [620 kB] 78s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-curl amd64 5.2.3+dfsg-1ubuntu1 [180 kB] 78s Get:122 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.8.9+dfsg-1 [445 kB] 78s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 78s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB] 78s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB] 78s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-openssl amd64 2.2.0+dfsg-1 [405 kB] 78s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB] 78s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 78s Get:129 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 78s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 78s Get:131 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-genomeinfodb all 1.42.1+dfsg-2 [3883 kB] 78s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.2-1 [164 kB] 78s Get:133 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-biostrings amd64 2.74.1+dfsg-2 [13.3 MB] 79s Get:134 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 79s Get:135 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrix amd64 1.7-1-1 [4199 kB] 79s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixstats amd64 1.4.1-1 [513 kB] 79s Get:137 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-matrixgenerics all 1.18.0-2 [446 kB] 79s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-abind all 1.4-8-1 [66.9 kB] 79s Get:139 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-s4arrays amd64 1.6.0+dfsg-2 [698 kB] 79s Get:140 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-sparsearray amd64 1.6.0+dfsg-2 [1392 kB] 79s Get:141 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-delayedarray amd64 0.32.0+dfsg-2 [2064 kB] 79s Get:142 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-genomicranges amd64 1.58.0+dfsg-2 [2083 kB] 80s Get:143 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 80s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-locfit amd64 1.5-9.10-1 [518 kB] 80s Get:145 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.3-1 [1348 kB] 80s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 80s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.4-1 [1708 kB] 80s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 80s Get:149 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 80s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 80s Get:151 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-mass amd64 7.3-64-1 [1114 kB] 80s Get:152 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nlme amd64 3.1.166-1 [2314 kB] 80s Get:153 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB] 80s Get:154 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB] 80s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 80s Get:156 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colorspace amd64 2.1-1+dfsg-1 [1563 kB] 81s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-munsell all 0.5.1-1 [213 kB] 81s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 81s Get:159 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridislite all 0.4.2-2 [1088 kB] 81s Get:160 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scales all 1.3.0-1 [603 kB] 81s Get:161 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 81s Get:162 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 81s Get:163 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 81s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 81s Get:165 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 81s Get:166 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 81s Get:167 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-2 [415 kB] 81s Get:168 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 81s Get:169 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 81s Get:170 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 81s Get:171 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-rcpp amd64 1.0.14-1 [1998 kB] 82s Get:172 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpparmadillo amd64 14.2.2-1-1 [864 kB] 82s Get:173 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-deseq2 amd64 1.46.0+dfsg-2 [1250 kB] 82s Get:174 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-rhtslib amd64 3.2.0+dfsg-2 [1499 kB] 82s Get:175 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-rsamtools amd64 2.22.0+dfsg-2 [3745 kB] 82s Get:176 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-genomicalignments amd64 1.42.0-2 [2165 kB] 82s Get:177 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-hsmmsinglecell all 1.26.0-2 [16.7 MB] 84s Get:178 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-statmod amd64 1.5.0-1 [295 kB] 84s Get:179 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-limma amd64 3.62.2+dfsg-1 [1969 kB] 84s Get:180 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vgam amd64 1.1-11-1 [7726 kB] 84s Get:181 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-irlba amd64 2.3.5.1-4 [295 kB] 84s Get:182 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1428 kB] 84s Get:183 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ddrtree amd64 0.1.5-2 [154 kB] 84s Get:184 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-igraph amd64 2.0.3-1 [5098 kB] 85s Get:185 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB] 85s Get:186 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cluster amd64 2.1.8-1 [579 kB] 85s Get:187 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-combinat all 0.0-8-7build1 [43.1 kB] 85s Get:188 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastica amd64 1.2-7-1 [46.6 kB] 85s Get:189 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rtsne amd64 0.17-1 [109 kB] 85s Get:190 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-stringi amd64 1.8.4-1build1 [927 kB] 85s Get:191 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 85s Get:192 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reshape2 amd64 1.4.4-2build1 [114 kB] 85s Get:193 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-leidenbase amd64 0.1.27-1 [2366 kB] 85s Get:194 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB] 85s Get:195 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB] 85s Get:196 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB] 85s Get:197 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pheatmap all 1.0.12-2build1 [78.2 kB] 85s Get:198 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB] 85s Get:199 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-slam amd64 0.1-55-1 [188 kB] 85s Get:200 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gridextra all 2.3-3build1 [1024 kB] 85s Get:201 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridis all 0.6.5-1 [2770 kB] 85s Get:202 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rann amd64 2.6.2-1 [46.3 kB] 86s Get:203 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-monocle amd64 2.34.0-2 [1522 kB] 86s Get:204 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-survival amd64 3.8-3-1 [8239 kB] 87s Get:205 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-multtest amd64 2.62.0-2 [844 kB] 87s Get:206 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rjson amd64 0.2.23-1 [104 kB] 87s Get:207 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB] 87s Get:208 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-restfulr amd64 0.0.15-1 [380 kB] 87s Get:209 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-rtracklayer amd64 1.66.0-2 [5227 kB] 87s Get:210 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-singlecellexperiment all 1.28.1+ds-2 [829 kB] 87s Get:211 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB] 87s Get:212 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ape amd64 5.8-1 [2923 kB] 87s Get:213 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 87s Get:214 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-beeswarm amd64 0.4.0-1 [82.3 kB] 87s Get:215 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bit amd64 4.0.5-1 [1063 kB] 87s Get:216 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bit64 amd64 4.0.5-1 [465 kB] 87s Get:217 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 87s Get:218 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 87s Get:219 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 87s Get:220 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 87s Get:221 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 87s Get:222 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 87s Get:223 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.4+dfsg-1 [245 kB] 87s Get:224 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 87s Get:225 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 87s Get:226 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.7.0+dfsg-1 [4255 kB] 88s Get:227 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cairo amd64 1.6-2-1 [88.8 kB] 88s Get:228 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ps amd64 1.8.0-1 [395 kB] 88s Get:229 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-processx amd64 3.8.4-1 [353 kB] 88s Get:230 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 88s Get:231 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-class amd64 7.3-23-1 [92.7 kB] 88s Get:232 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-e1071 amd64 1.7-16-1 [565 kB] 88s Get:233 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-iterators all 1.0.14-1 [336 kB] 88s Get:234 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-foreach all 1.5.2-1 [124 kB] 88s Get:235 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-data.table amd64 1.16.4+dfsg-1 [2032 kB] 88s Get:236 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-modelmetrics amd64 1.2.2.2-1build1 [128 kB] 88s Get:237 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proc amd64 1.18.5-1 [966 kB] 88s Get:238 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tzdb amd64 0.4.0-2 [521 kB] 88s Get:239 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-clock amd64 0.7.1-1 [1804 kB] 88s Get:240 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gower amd64 1.0.1-1 [207 kB] 88s Get:241 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-hardhat all 1.4.0+dfsg-1 [565 kB] 88s Get:242 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rpart amd64 4.1.24-1 [670 kB] 88s Get:243 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nnet amd64 7.3-20-1 [116 kB] 88s Get:244 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shape all 1.4.6.1-1 [749 kB] 88s Get:245 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diagram all 1.6.5-2 [656 kB] 88s Get:246 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernsmooth amd64 2.23-26-1 [94.5 kB] 88s Get:247 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-globals all 0.16.3-1 [120 kB] 88s Get:248 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-listenv all 0.9.1+dfsg-1 [112 kB] 88s Get:249 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-parallelly amd64 1.38.0-1 [385 kB] 88s Get:250 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-future all 1.34.0+dfsg-1 [646 kB] 88s Get:251 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-future.apply all 1.11.2+dfsg-1 [172 kB] 88s Get:252 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-numderiv all 2016.8-1.1-3 [115 kB] 88s Get:253 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-progressr all 0.14.0-1 [338 kB] 88s Get:254 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-squarem all 2021.1-1 [179 kB] 88s Get:255 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lava all 1.7.3+dfsg-1 [2166 kB] 88s Get:256 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-prodlim amd64 2024.06.25-1 [415 kB] 88s Get:257 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ipred amd64 0.9-15-1 [386 kB] 88s Get:258 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-timechange amd64 0.3.0-1 [178 kB] 88s Get:259 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lubridate amd64 1.9.3+dfsg-1 [1010 kB] 88s Get:260 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-purrr amd64 1.0.2-1 [502 kB] 88s Get:261 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 88s Get:262 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-timedate amd64 4041.110-1 [1208 kB] 88s Get:263 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-recipes all 1.1.0+dfsg-1 [2035 kB] 88s Get:264 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-caret amd64 6.0-94+dfsg-1 [3434 kB] 88s Get:265 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-catools amd64 1.18.2-1 [201 kB] 88s Get:266 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 1.0.0-1 [111 kB] 88s Get:267 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xfun amd64 0.49+dfsg-1 [545 kB] 88s Get:268 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 88s Get:269 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 89s Get:270 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 89s Get:271 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 89s Get:272 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tinytex all 0.53-1 [145 kB] 89s Get:273 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-modernizr all 3.13.0-0.1 [101 kB] 89s Get:274 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.3.2+dfsg-1 [123 kB] 89s Get:275 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.0+dfsg-1 [287 kB] 89s Get:276 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 89s Get:277 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 89s Get:278 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 89s Get:279 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.2-2 [137 kB] 89s Get:280 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 89s Get:281 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.9.1+dfsg-1 [3111 kB] 89s Get:282 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rmarkdown all 2.28+dfsg-1 [1501 kB] 89s Get:283 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 89s Get:284 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-miniui all 0.1.1.1-3build1 [36.1 kB] 89s Get:285 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shinyjs all 2.1.0-1 [967 kB] 89s Get:286 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colourpicker all 1.3.0+dfsg-1 [1191 kB] 89s Get:287 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-conquer amd64 1.3.3-1 [499 kB] 89s Get:288 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cowplot all 1.1.3+dfsg-1 [614 kB] 89s Get:289 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lazyeval amd64 0.2.2-1build1 [144 kB] 89s Get:290 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 89s Get:291 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-deldir amd64 2.0-4-1build1 [270 kB] 89s Get:292 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-deoptimr all 1.1-3-1-1 [76.6 kB] 89s Get:293 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 89s Get:294 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 89s Get:295 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dotcall64 amd64 1.1-1-1 [38.1 kB] 89s Get:296 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sitmo amd64 2.0.2-1 [130 kB] 89s Get:297 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dqrng amd64 0.3.2+dfsg-1 [161 kB] 89s Get:298 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastdummies all 1.7.4-1 [49.7 kB] 89s Get:299 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fitdistrplus all 1.2-1-1 [2038 kB] 89s Get:300 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fnn amd64 1.1.4.1-1 [126 kB] 89s Get:301 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtools amd64 3.9.5-1 [340 kB] 89s Get:302 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gdata all 3.0.1-1 [491 kB] 89s Get:303 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vipor all 0.4.7-1 [4624 kB] 90s Get:304 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggbeeswarm all 0.7.2-1 [1732 kB] 90s Get:305 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-png amd64 0.1-8-1build2 [40.6 kB] 90s Get:306 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-systemfonts amd64 1.1.0-1 [245 kB] 90s Get:307 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-textshaping amd64 0.3.7-2 [95.5 kB] 90s Get:308 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ragg amd64 1.3.3-1 [510 kB] 90s Get:309 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggrastr all 1.0.2-1 [2566 kB] 90s Get:310 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggrepel amd64 0.9.5-2 [254 kB] 90s Get:311 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggridges all 0.5.6-1 [2195 kB] 90s Get:312 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-goftest amd64 1.2-3-1 [59.5 kB] 90s Get:313 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gplots all 3.2.0-1 [484 kB] 90s Get:314 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-hdf5r amd64 1.3.11+dfsg-1 [1979 kB] 90s Get:315 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rprojroot all 2.0.4-1 [124 kB] 90s Get:316 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-here all 1.0.1-2 [50.3 kB] 90s Get:317 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ica all 1.0-3-1 [85.4 kB] 90s Get:318 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernlab amd64 0.9-33-1 [1947 kB] 90s Get:319 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpptoml amd64 0.2.2+dfsg-1 [110 kB] 90s Get:320 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reticulate amd64 1.39.0+dfsg-1 [1238 kB] 90s Get:321 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-leiden all 0.4.3.1+dfsg-1 [71.9 kB] 90s Get:322 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-zoo amd64 1.8-12-2 [984 kB] 91s Get:323 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lmtest amd64 0.9.40-1 [396 kB] 91s Get:324 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mathjaxr all 1.6-0-1 [605 kB] 91s Get:325 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixmodels all 0.5-3-1 [361 kB] 91s Get:326 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rbibutils amd64 2.3-1 [1023 kB] 91s Get:327 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rdpack all 2.6.2-1 [757 kB] 91s Get:328 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mnormt amd64 2.1.1-2 [170 kB] 91s Get:329 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sparsem amd64 1.84-2-1 [813 kB] 91s Get:330 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-quantreg amd64 5.99.1-1 [1455 kB] 91s Get:331 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sn all 2.1.1-2 [1815 kB] 91s Get:332 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-mvtnorm amd64 1.3-3-1 [923 kB] 91s Get:333 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tfisher all 0.2.0-3 [79.8 kB] 91s Get:334 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plotrix all 3.8-4-1 [1120 kB] 91s Get:335 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-th.data all 1.1-2-2 [8794 kB] 91s Get:336 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sandwich all 3.1-1-1 [1483 kB] 91s Get:337 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-multcomp all 1.4-26-2 [699 kB] 91s Get:338 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mutoss all 0.1-13-1 [1123 kB] 91s Get:339 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-robustbase amd64 0.99-4-1-1 [3038 kB] 91s Get:340 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-qqconf amd64 1.3.2+dfsg-1 [157 kB] 91s Get:341 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-metap all 1.11-1 [570 kB] 91s Get:342 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plotly all 4.10.4+dfsg-2 [3666 kB] 92s Get:343 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-segmented all 2.1-3-1 [1366 kB] 92s Get:344 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mixtools amd64 2.0.0-1 [1399 kB] 92s Get:345 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-patchwork all 1.3.0-1 [3220 kB] 92s Get:346 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pbapply all 1.7-2-1 [102 kB] 92s Get:347 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgbuild all 1.4.4-1 [212 kB] 92s Get:348 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgload all 1.4.0-1 [247 kB] 92s Get:349 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-polyclip amd64 1.10-7-1 [116 kB] 92s Get:350 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 92s Get:351 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 92s Get:352 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.oo all 1.26.0-1 [955 kB] 92s Get:353 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.utils all 2.12.3-1 [1386 kB] 92s Get:354 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppannoy amd64 0.0.22-1 [235 kB] 92s Get:355 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpphnsw amd64 0.5.0+ds-1 [171 kB] 92s Get:356 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppprogress all 0.4.2-2build1 [22.0 kB] 92s Get:357 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rocr all 1.0-11-3 [456 kB] 92s Get:358 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rspectra amd64 0.16-2-1 [448 kB] 92s Get:359 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rsvd all 1.0.5-1 [3589 kB] 92s Get:360 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scattermore amd64 1.2-1 [331 kB] 92s Get:361 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sctransform amd64 0.4.1-1 [504 kB] 92s Get:362 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sp amd64 1:2.1-4+dfsg-1 [1472 kB] 92s Get:363 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spam amd64 2.11-0-1 [2758 kB] 92s Get:364 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-seuratobject amd64 5.0.2-1 [1744 kB] 92s Get:365 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.utils amd64 3.1-0-1 [381 kB] 92s Get:366 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.data all 3.1-2-1 [4039 kB] 92s Get:367 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.geom amd64 3.2-9-2 [3946 kB] 93s Get:368 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.random amd64 3.2-3-1 [1169 kB] 93s Get:369 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tensor all 1.5-4 [15.7 kB] 93s Get:370 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.sparse amd64 3.0-3-1 [215 kB] 93s Get:371 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.explore amd64 3.2-7-1 [3432 kB] 93s Get:372 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-uwot amd64 0.2.2-1 [947 kB] 93s Get:373 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-seurat amd64 5.1.0-1 [3255 kB] 93s Get:374 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-waldo all 0.6.1-1 [150 kB] 93s Get:375 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-testthat amd64 3.2.1.1-1 [1636 kB] 94s Preconfiguring packages ... 94s Fetched 414 MB in 20s (20.6 MB/s) 94s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75824 files and directories currently installed.) 94s Preparing to unpack .../gcc-14-base_14.2.0-13ubuntu1_amd64.deb ... 94s Unpacking gcc-14-base:amd64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 94s Setting up gcc-14-base:amd64 (14.2.0-13ubuntu1) ... 94s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75824 files and directories currently installed.) 94s Preparing to unpack .../libstdc++6_14.2.0-13ubuntu1_amd64.deb ... 94s Unpacking libstdc++6:amd64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 94s Setting up libstdc++6:amd64 (14.2.0-13ubuntu1) ... 94s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75824 files and directories currently installed.) 94s Preparing to unpack .../libatomic1_14.2.0-13ubuntu1_amd64.deb ... 94s Unpacking libatomic1:amd64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 94s Preparing to unpack .../libgcc-s1_14.2.0-13ubuntu1_amd64.deb ... 94s Unpacking libgcc-s1:amd64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 94s Setting up libgcc-s1:amd64 (14.2.0-13ubuntu1) ... 94s Selecting previously unselected package fonts-dejavu-mono. 94s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75824 files and directories currently installed.) 94s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8_all.deb ... 94s Unpacking fonts-dejavu-mono (2.37-8) ... 94s Selecting previously unselected package fonts-dejavu-core. 94s Preparing to unpack .../001-fonts-dejavu-core_2.37-8_all.deb ... 94s Unpacking fonts-dejavu-core (2.37-8) ... 94s Selecting previously unselected package fontconfig-config. 94s Preparing to unpack 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unpack .../093-r-bioc-s4vectors_0.44.0+dfsg-2_amd64.deb ... 102s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 102s Selecting previously unselected package r-bioc-biocio. 102s Preparing to unpack .../094-r-bioc-biocio_1.16.0+dfsg-2_all.deb ... 102s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ... 102s Selecting previously unselected package r-cran-formatr. 102s Preparing to unpack .../095-r-cran-formatr_1.14-2_all.deb ... 102s Unpacking r-cran-formatr (1.14-2) ... 102s Selecting previously unselected package r-cran-lambda.r. 102s Preparing to unpack .../096-r-cran-lambda.r_1.2.4-2build1_all.deb ... 102s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 102s Selecting previously unselected package r-cran-futile.options. 102s Preparing to unpack .../097-r-cran-futile.options_1.0.1-3build1_all.deb ... 102s Unpacking r-cran-futile.options (1.0.1-3build1) ... 102s Selecting previously unselected package r-cran-futile.logger. 102s Preparing to unpack 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previously unselected package r-bioc-graph. 102s Preparing to unpack .../104-r-bioc-graph_1.84.1-1_amd64.deb ... 102s Unpacking r-bioc-graph (1.84.1-1) ... 102s Selecting previously unselected package r-bioc-rbgl. 102s Preparing to unpack .../105-r-bioc-rbgl_1.82.0+dfsg-2_amd64.deb ... 102s Unpacking r-bioc-rbgl (1.82.0+dfsg-2) ... 102s Selecting previously unselected package r-cran-xml. 102s Preparing to unpack .../106-r-cran-xml_3.99-0.18-1_amd64.deb ... 102s Unpacking r-cran-xml (3.99-0.18-1) ... 102s Selecting previously unselected package r-cran-bitops. 102s Preparing to unpack .../107-r-cran-bitops_1.0-8-1_amd64.deb ... 102s Unpacking r-cran-bitops (1.0-8-1) ... 102s Selecting previously unselected package r-cran-rcurl. 102s Preparing to unpack .../108-r-cran-rcurl_1.98-1.16+dfsg-1_amd64.deb ... 102s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 102s Selecting previously unselected package r-cran-runit. 102s Preparing to unpack .../109-r-cran-runit_0.4.33-1_all.deb ... 102s Unpacking r-cran-runit (0.4.33-1) ... 102s Selecting previously unselected package r-cran-biocmanager. 102s Preparing to unpack .../110-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 102s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 102s Selecting previously unselected package r-bioc-biocviews. 102s Preparing to unpack .../111-r-bioc-biocviews_1.74.0-2_all.deb ... 102s Unpacking r-bioc-biocviews (1.74.0-2) ... 102s Selecting previously unselected package r-bioc-iranges. 102s Preparing to unpack .../112-r-bioc-iranges_2.40.1-2_amd64.deb ... 102s Unpacking r-bioc-iranges (2.40.1-2) ... 103s Selecting previously unselected package zlib1g-dev:amd64. 103s Preparing to unpack .../113-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ... 103s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 103s Selecting previously unselected package r-bioc-zlibbioc. 103s Preparing to unpack .../114-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 103s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 103s Selecting previously unselected package r-bioc-xvector. 103s Preparing to unpack .../115-r-bioc-xvector_0.46.0-2_amd64.deb ... 103s Unpacking r-bioc-xvector (0.46.0-2) ... 103s Selecting previously unselected package r-cran-curl. 103s Preparing to unpack .../116-r-cran-curl_5.2.3+dfsg-1ubuntu1_amd64.deb ... 103s Unpacking r-cran-curl (5.2.3+dfsg-1ubuntu1) ... 103s Selecting previously unselected package r-cran-jsonlite. 103s Preparing to unpack .../117-r-cran-jsonlite_1.8.9+dfsg-1_amd64.deb ... 103s Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ... 103s Selecting previously unselected package r-cran-mime. 103s Preparing to unpack .../118-r-cran-mime_0.12-2_amd64.deb ... 103s Unpacking r-cran-mime (0.12-2) ... 103s Selecting previously unselected package r-cran-sys. 103s Preparing to unpack .../119-r-cran-sys_3.4.3-1_amd64.deb ... 103s Unpacking r-cran-sys (3.4.3-1) ... 103s Selecting previously unselected package r-cran-askpass. 103s Preparing to unpack .../120-r-cran-askpass_1.2.1-1_amd64.deb ... 103s Unpacking r-cran-askpass (1.2.1-1) ... 103s Selecting previously unselected package r-cran-openssl. 103s Preparing to unpack .../121-r-cran-openssl_2.2.0+dfsg-1_amd64.deb ... 103s Unpacking r-cran-openssl (2.2.0+dfsg-1) ... 103s Selecting previously unselected package r-cran-r6. 103s Preparing to unpack .../122-r-cran-r6_2.5.1-1_all.deb ... 103s Unpacking r-cran-r6 (2.5.1-1) ... 103s Selecting previously unselected package r-cran-httr. 103s Preparing to unpack .../123-r-cran-httr_1.4.7+dfsg-1_all.deb ... 103s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 103s Selecting previously unselected package r-bioc-ucsc.utils. 103s Preparing to unpack .../124-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 103s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 103s Selecting previously unselected package r-bioc-genomeinfodbdata. 103s Preparing to unpack .../125-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 103s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 103s Selecting previously unselected package r-bioc-genomeinfodb. 103s Preparing to unpack .../126-r-bioc-genomeinfodb_1.42.1+dfsg-2_all.deb ... 103s Unpacking r-bioc-genomeinfodb (1.42.1+dfsg-2) ... 103s Selecting previously unselected package r-cran-crayon. 103s Preparing to unpack .../127-r-cran-crayon_1.5.2-1_all.deb ... 103s Unpacking r-cran-crayon (1.5.2-1) ... 103s Selecting previously unselected package r-bioc-biostrings. 103s Preparing to unpack .../128-r-bioc-biostrings_2.74.1+dfsg-2_amd64.deb ... 103s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 103s Selecting previously unselected package r-cran-lattice. 103s Preparing to unpack .../129-r-cran-lattice_0.22-6-1_amd64.deb ... 103s Unpacking r-cran-lattice (0.22-6-1) ... 103s Selecting previously unselected package r-cran-matrix. 103s Preparing to unpack .../130-r-cran-matrix_1.7-1-1_amd64.deb ... 103s Unpacking r-cran-matrix (1.7-1-1) ... 103s Selecting previously unselected package r-cran-matrixstats. 103s Preparing to unpack .../131-r-cran-matrixstats_1.4.1-1_amd64.deb ... 103s Unpacking r-cran-matrixstats (1.4.1-1) ... 103s Selecting previously unselected package r-bioc-matrixgenerics. 103s Preparing to unpack .../132-r-bioc-matrixgenerics_1.18.0-2_all.deb ... 103s Unpacking r-bioc-matrixgenerics (1.18.0-2) ... 103s Selecting previously unselected package r-cran-abind. 103s Preparing to unpack .../133-r-cran-abind_1.4-8-1_all.deb ... 103s Unpacking r-cran-abind (1.4-8-1) ... 104s Selecting previously unselected package r-bioc-s4arrays. 104s Preparing to unpack .../134-r-bioc-s4arrays_1.6.0+dfsg-2_amd64.deb ... 104s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 104s Selecting previously unselected package r-bioc-sparsearray. 104s Preparing to unpack .../135-r-bioc-sparsearray_1.6.0+dfsg-2_amd64.deb ... 104s Unpacking r-bioc-sparsearray (1.6.0+dfsg-2) ... 104s Selecting previously unselected package r-bioc-delayedarray. 104s Preparing to unpack .../136-r-bioc-delayedarray_0.32.0+dfsg-2_amd64.deb ... 104s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 104s Selecting previously unselected package r-bioc-genomicranges. 104s Preparing to unpack .../137-r-bioc-genomicranges_1.58.0+dfsg-2_amd64.deb ... 104s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 104s Selecting previously unselected package r-bioc-summarizedexperiment. 104s Preparing to unpack .../138-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 104s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 104s Selecting previously unselected package r-cran-locfit. 104s Preparing to unpack .../139-r-cran-locfit_1.5-9.10-1_amd64.deb ... 104s Unpacking r-cran-locfit (1.5-9.10-1) ... 104s Selecting previously unselected package r-cran-cli. 104s Preparing to unpack .../140-r-cran-cli_3.6.3-1_amd64.deb ... 104s Unpacking r-cran-cli (3.6.3-1) ... 104s Selecting previously unselected package r-cran-glue. 104s Preparing to unpack .../141-r-cran-glue_1.8.0-1_amd64.deb ... 104s Unpacking r-cran-glue (1.8.0-1) ... 104s Selecting previously unselected package r-cran-rlang. 104s Preparing to unpack .../142-r-cran-rlang_1.1.4-1_amd64.deb ... 104s Unpacking r-cran-rlang (1.1.4-1) ... 104s Selecting previously unselected package r-cran-lifecycle. 104s Preparing to unpack .../143-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 104s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 104s Selecting previously unselected package r-cran-gtable. 104s Preparing to unpack .../144-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 104s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 104s Selecting previously unselected package r-cran-isoband. 104s Preparing to unpack .../145-r-cran-isoband_0.2.7-1_amd64.deb ... 104s Unpacking r-cran-isoband (0.2.7-1) ... 104s Selecting previously unselected package r-cran-mass. 104s Preparing to unpack .../146-r-cran-mass_7.3-64-1_amd64.deb ... 104s Unpacking r-cran-mass (7.3-64-1) ... 104s Selecting previously unselected package r-cran-nlme. 104s Preparing to unpack .../147-r-cran-nlme_3.1.166-1_amd64.deb ... 104s Unpacking r-cran-nlme (3.1.166-1) ... 104s Selecting previously unselected package r-cran-mgcv. 104s Preparing to unpack .../148-r-cran-mgcv_1.9-1-1_amd64.deb ... 104s Unpacking r-cran-mgcv (1.9-1-1) ... 104s Selecting previously unselected package r-cran-farver. 104s Preparing to unpack .../149-r-cran-farver_2.1.2-1_amd64.deb ... 104s Unpacking r-cran-farver (2.1.2-1) ... 104s Selecting previously unselected package r-cran-labeling. 104s Preparing to unpack .../150-r-cran-labeling_0.4.3-1_all.deb ... 104s Unpacking r-cran-labeling (0.4.3-1) ... 104s Selecting previously unselected package r-cran-colorspace. 104s Preparing to unpack .../151-r-cran-colorspace_2.1-1+dfsg-1_amd64.deb ... 104s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 104s Selecting previously unselected package r-cran-munsell. 104s Preparing to unpack .../152-r-cran-munsell_0.5.1-1_all.deb ... 104s Unpacking r-cran-munsell (0.5.1-1) ... 104s Selecting previously unselected package r-cran-rcolorbrewer. 104s Preparing to unpack .../153-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 104s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 104s Selecting previously unselected package r-cran-viridislite. 104s Preparing to unpack .../154-r-cran-viridislite_0.4.2-2_all.deb ... 104s Unpacking r-cran-viridislite (0.4.2-2) ... 105s Selecting previously unselected package r-cran-scales. 105s Preparing to unpack .../155-r-cran-scales_1.3.0-1_all.deb ... 105s Unpacking r-cran-scales (1.3.0-1) ... 105s Selecting previously unselected package r-cran-fansi. 105s Preparing to unpack .../156-r-cran-fansi_1.0.5-1_amd64.deb ... 105s Unpacking r-cran-fansi (1.0.5-1) ... 105s Selecting previously unselected package r-cran-magrittr. 105s Preparing to unpack .../157-r-cran-magrittr_2.0.3-1_amd64.deb ... 105s Unpacking r-cran-magrittr (2.0.3-1) ... 105s Selecting previously unselected package r-cran-utf8. 105s Preparing to unpack .../158-r-cran-utf8_1.2.4-1_amd64.deb ... 105s Unpacking r-cran-utf8 (1.2.4-1) ... 105s Selecting previously unselected package r-cran-vctrs. 105s Preparing to unpack .../159-r-cran-vctrs_0.6.5-1_amd64.deb ... 105s Unpacking r-cran-vctrs (0.6.5-1) ... 105s Selecting previously unselected package r-cran-pillar. 105s Preparing to unpack .../160-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 105s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 105s Selecting previously unselected package r-cran-pkgconfig. 105s Preparing to unpack .../161-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 105s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 105s Selecting previously unselected package r-cran-tibble. 105s Preparing to unpack .../162-r-cran-tibble_3.2.1+dfsg-2_amd64.deb ... 105s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 105s Selecting previously unselected package r-cran-withr. 105s Preparing to unpack .../163-r-cran-withr_3.0.2+dfsg-1_all.deb ... 105s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 105s Selecting previously unselected package r-cran-ggplot2. 105s Preparing to unpack .../164-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 105s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 105s Selecting previously unselected package r-cran-pkgkitten. 105s Preparing to unpack .../165-r-cran-pkgkitten_0.2.4-1_all.deb ... 105s Unpacking r-cran-pkgkitten (0.2.4-1) ... 105s Selecting previously unselected package r-cran-rcpp. 105s Preparing to unpack .../166-r-cran-rcpp_1.0.14-1_amd64.deb ... 105s Unpacking r-cran-rcpp (1.0.14-1) ... 105s Selecting previously unselected package r-cran-rcpparmadillo. 105s Preparing to unpack .../167-r-cran-rcpparmadillo_14.2.2-1-1_amd64.deb ... 105s Unpacking r-cran-rcpparmadillo (14.2.2-1-1) ... 105s Selecting previously unselected package r-bioc-deseq2. 105s Preparing to unpack .../168-r-bioc-deseq2_1.46.0+dfsg-2_amd64.deb ... 105s Unpacking r-bioc-deseq2 (1.46.0+dfsg-2) ... 105s Selecting previously unselected package r-bioc-rhtslib. 105s Preparing to unpack .../169-r-bioc-rhtslib_3.2.0+dfsg-2_amd64.deb ... 105s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 106s Selecting previously unselected package r-bioc-rsamtools. 106s Preparing to unpack .../170-r-bioc-rsamtools_2.22.0+dfsg-2_amd64.deb ... 106s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 106s Selecting previously unselected package r-bioc-genomicalignments. 106s Preparing to unpack .../171-r-bioc-genomicalignments_1.42.0-2_amd64.deb ... 106s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 106s Selecting previously unselected package r-bioc-hsmmsinglecell. 106s Preparing to unpack .../172-r-bioc-hsmmsinglecell_1.26.0-2_all.deb ... 106s Unpacking r-bioc-hsmmsinglecell (1.26.0-2) ... 106s Selecting previously unselected package r-cran-statmod. 106s Preparing to unpack .../173-r-cran-statmod_1.5.0-1_amd64.deb ... 106s Unpacking r-cran-statmod (1.5.0-1) ... 106s Selecting previously unselected package r-bioc-limma. 106s Preparing to unpack .../174-r-bioc-limma_3.62.2+dfsg-1_amd64.deb ... 106s Unpacking r-bioc-limma (3.62.2+dfsg-1) ... 106s Selecting previously unselected package r-cran-vgam. 106s Preparing to unpack .../175-r-cran-vgam_1.1-11-1_amd64.deb ... 106s Unpacking r-cran-vgam (1.1-11-1) ... 106s Selecting previously unselected package r-cran-irlba. 106s Preparing to unpack .../176-r-cran-irlba_2.3.5.1-4_amd64.deb ... 106s Unpacking r-cran-irlba (2.3.5.1-4) ... 106s Selecting previously unselected package r-cran-rcppeigen. 106s Preparing to unpack .../177-r-cran-rcppeigen_0.3.4.0.2-1_amd64.deb ... 106s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 106s Selecting previously unselected package r-cran-ddrtree. 106s Preparing to unpack .../178-r-cran-ddrtree_0.1.5-2_amd64.deb ... 106s Unpacking r-cran-ddrtree (0.1.5-2) ... 106s Selecting previously unselected package r-cran-igraph. 106s Preparing to unpack .../179-r-cran-igraph_2.0.3-1_amd64.deb ... 106s Unpacking r-cran-igraph (2.0.3-1) ... 106s Selecting previously unselected package r-cran-plyr. 106s Preparing to unpack .../180-r-cran-plyr_1.8.9-1_amd64.deb ... 106s Unpacking r-cran-plyr (1.8.9-1) ... 106s Selecting previously unselected package r-cran-cluster. 106s Preparing to unpack .../181-r-cran-cluster_2.1.8-1_amd64.deb ... 106s Unpacking r-cran-cluster (2.1.8-1) ... 106s Selecting previously unselected package r-cran-combinat. 106s Preparing to unpack .../182-r-cran-combinat_0.0-8-7build1_all.deb ... 106s Unpacking r-cran-combinat (0.0-8-7build1) ... 106s Selecting previously unselected package r-cran-fastica. 106s Preparing to unpack .../183-r-cran-fastica_1.2-7-1_amd64.deb ... 106s Unpacking r-cran-fastica (1.2-7-1) ... 106s Selecting previously unselected package r-cran-rtsne. 106s Preparing to unpack .../184-r-cran-rtsne_0.17-1_amd64.deb ... 106s Unpacking r-cran-rtsne (0.17-1) ... 106s Selecting previously unselected package r-cran-stringi. 106s Preparing to unpack .../185-r-cran-stringi_1.8.4-1build1_amd64.deb ... 106s Unpacking r-cran-stringi (1.8.4-1build1) ... 107s Selecting previously unselected package r-cran-stringr. 107s Preparing to unpack .../186-r-cran-stringr_1.5.1-1_all.deb ... 107s Unpacking r-cran-stringr (1.5.1-1) ... 107s Selecting previously unselected package r-cran-reshape2. 107s Preparing to unpack .../187-r-cran-reshape2_1.4.4-2build1_amd64.deb ... 107s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 107s Selecting previously unselected package r-cran-leidenbase. 107s Preparing to unpack .../188-r-cran-leidenbase_0.1.27-1_amd64.deb ... 107s Unpacking r-cran-leidenbase (0.1.27-1) ... 107s Selecting previously unselected package r-cran-generics. 107s Preparing to unpack .../189-r-cran-generics_0.1.3-1_all.deb ... 107s Unpacking r-cran-generics (0.1.3-1) ... 107s Selecting previously unselected package r-cran-tidyselect. 107s Preparing to unpack .../190-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ... 107s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 107s Selecting previously unselected package r-cran-dplyr. 107s Preparing to unpack .../191-r-cran-dplyr_1.1.4-4_amd64.deb ... 107s Unpacking r-cran-dplyr (1.1.4-4) ... 107s Selecting previously unselected package r-cran-pheatmap. 107s Preparing to unpack .../192-r-cran-pheatmap_1.0.12-2build1_all.deb ... 107s Unpacking r-cran-pheatmap (1.0.12-2build1) ... 107s Selecting previously unselected package r-cran-proxy. 107s Preparing to unpack .../193-r-cran-proxy_0.4-27-1_amd64.deb ... 107s Unpacking r-cran-proxy (0.4-27-1) ... 107s Selecting previously unselected package r-cran-slam. 107s Preparing to unpack .../194-r-cran-slam_0.1-55-1_amd64.deb ... 107s Unpacking r-cran-slam (0.1-55-1) ... 107s Selecting previously unselected package r-cran-gridextra. 107s Preparing to unpack .../195-r-cran-gridextra_2.3-3build1_all.deb ... 107s Unpacking r-cran-gridextra (2.3-3build1) ... 107s Selecting previously unselected package r-cran-viridis. 107s Preparing to unpack .../196-r-cran-viridis_0.6.5-1_all.deb ... 107s Unpacking r-cran-viridis (0.6.5-1) ... 107s Selecting previously unselected package r-cran-rann. 107s Preparing to unpack .../197-r-cran-rann_2.6.2-1_amd64.deb ... 107s Unpacking r-cran-rann (2.6.2-1) ... 107s Selecting previously unselected package r-bioc-monocle. 107s Preparing to unpack .../198-r-bioc-monocle_2.34.0-2_amd64.deb ... 107s Unpacking r-bioc-monocle (2.34.0-2) ... 107s Selecting previously unselected package r-cran-survival. 107s Preparing to unpack .../199-r-cran-survival_3.8-3-1_amd64.deb ... 107s Unpacking r-cran-survival (3.8-3-1) ... 107s Selecting previously unselected package r-bioc-multtest. 107s Preparing to unpack .../200-r-bioc-multtest_2.62.0-2_amd64.deb ... 107s Unpacking r-bioc-multtest (2.62.0-2) ... 107s Selecting previously unselected package r-cran-rjson. 107s Preparing to unpack .../201-r-cran-rjson_0.2.23-1_amd64.deb ... 107s Unpacking r-cran-rjson (0.2.23-1) ... 107s Selecting previously unselected package r-cran-yaml. 107s Preparing to unpack .../202-r-cran-yaml_2.3.10-1_amd64.deb ... 107s Unpacking r-cran-yaml (2.3.10-1) ... 107s Selecting previously unselected package r-cran-restfulr. 107s Preparing to unpack .../203-r-cran-restfulr_0.0.15-1_amd64.deb ... 107s Unpacking r-cran-restfulr (0.0.15-1) ... 107s Selecting previously unselected package r-bioc-rtracklayer. 107s Preparing to unpack .../204-r-bioc-rtracklayer_1.66.0-2_amd64.deb ... 107s Unpacking r-bioc-rtracklayer (1.66.0-2) ... 107s Selecting previously unselected package r-bioc-singlecellexperiment. 107s Preparing to unpack .../205-r-bioc-singlecellexperiment_1.28.1+ds-2_all.deb ... 107s Unpacking r-bioc-singlecellexperiment (1.28.1+ds-2) ... 107s Selecting previously unselected package r-cran-digest. 107s Preparing to unpack .../206-r-cran-digest_0.6.37-1_amd64.deb ... 107s Unpacking r-cran-digest (0.6.37-1) ... 108s Selecting previously unselected package r-cran-ape. 108s Preparing to unpack .../207-r-cran-ape_5.8-1_amd64.deb ... 108s Unpacking r-cran-ape (5.8-1) ... 108s Selecting previously unselected package r-cran-base64enc. 108s Preparing to unpack .../208-r-cran-base64enc_0.1-3-3_amd64.deb ... 108s Unpacking r-cran-base64enc (0.1-3-3) ... 108s Selecting previously unselected package r-cran-beeswarm. 108s Preparing to unpack .../209-r-cran-beeswarm_0.4.0-1_amd64.deb ... 108s Unpacking r-cran-beeswarm (0.4.0-1) ... 108s Selecting previously unselected package r-cran-bit. 108s Preparing to unpack .../210-r-cran-bit_4.0.5-1_amd64.deb ... 108s Unpacking r-cran-bit (4.0.5-1) ... 108s Selecting previously unselected package r-cran-bit64. 108s Preparing to unpack .../211-r-cran-bit64_4.0.5-1_amd64.deb ... 108s Unpacking r-cran-bit64 (4.0.5-1) ... 108s Selecting previously unselected package r-cran-brio. 108s Preparing to unpack .../212-r-cran-brio_1.1.5-1_amd64.deb ... 108s Unpacking r-cran-brio (1.1.5-1) ... 108s Selecting previously unselected package r-cran-fastmap. 108s Preparing to unpack .../213-r-cran-fastmap_1.2.0-1_amd64.deb ... 108s Unpacking r-cran-fastmap (1.2.0-1) ... 108s Selecting previously unselected package r-cran-cachem. 108s Preparing to unpack .../214-r-cran-cachem_1.1.0-1_amd64.deb ... 108s Unpacking r-cran-cachem (1.1.0-1) ... 108s Selecting previously unselected package r-cran-htmltools. 108s Preparing to unpack .../215-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 108s Unpacking r-cran-htmltools (0.5.8.1-1) ... 108s Selecting previously unselected package r-cran-jquerylib. 108s Preparing to unpack .../216-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 108s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 108s Selecting previously unselected package r-cran-memoise. 108s Preparing to unpack .../217-r-cran-memoise_2.0.1-1_all.deb ... 108s Unpacking r-cran-memoise (2.0.1-1) ... 108s Selecting previously unselected package r-cran-fs. 108s Preparing to unpack .../218-r-cran-fs_1.6.4+dfsg-1_amd64.deb ... 108s Unpacking r-cran-fs (1.6.4+dfsg-1) ... 108s Selecting previously unselected package r-cran-rappdirs. 108s Preparing to unpack .../219-r-cran-rappdirs_0.3.3-1_amd64.deb ... 108s Unpacking r-cran-rappdirs (0.3.3-1) ... 108s Selecting previously unselected package r-cran-sass. 108s Preparing to unpack .../220-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 108s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 108s Selecting previously unselected package r-cran-bslib. 108s Preparing to unpack .../221-r-cran-bslib_0.7.0+dfsg-1_all.deb ... 108s Unpacking r-cran-bslib (0.7.0+dfsg-1) ... 108s Selecting previously unselected package r-cran-cairo. 108s Preparing to unpack .../222-r-cran-cairo_1.6-2-1_amd64.deb ... 108s Unpacking r-cran-cairo (1.6-2-1) ... 108s Selecting previously unselected package r-cran-ps. 108s Preparing to unpack .../223-r-cran-ps_1.8.0-1_amd64.deb ... 108s Unpacking r-cran-ps (1.8.0-1) ... 108s Selecting previously unselected package r-cran-processx. 108s Preparing to unpack .../224-r-cran-processx_3.8.4-1_amd64.deb ... 108s Unpacking r-cran-processx (3.8.4-1) ... 108s Selecting previously unselected package r-cran-callr. 108s Preparing to unpack .../225-r-cran-callr_3.7.6-1_all.deb ... 108s Unpacking r-cran-callr (3.7.6-1) ... 108s Selecting previously unselected package r-cran-class. 109s Preparing to unpack .../226-r-cran-class_7.3-23-1_amd64.deb ... 109s Unpacking r-cran-class (7.3-23-1) ... 109s Selecting previously unselected package r-cran-e1071. 109s Preparing to unpack .../227-r-cran-e1071_1.7-16-1_amd64.deb ... 109s Unpacking r-cran-e1071 (1.7-16-1) ... 109s Selecting previously unselected package r-cran-iterators. 109s Preparing to unpack .../228-r-cran-iterators_1.0.14-1_all.deb ... 109s Unpacking r-cran-iterators (1.0.14-1) ... 109s Selecting previously unselected package r-cran-foreach. 109s Preparing to unpack .../229-r-cran-foreach_1.5.2-1_all.deb ... 109s Unpacking r-cran-foreach (1.5.2-1) ... 109s Selecting previously unselected package r-cran-data.table. 109s Preparing to unpack .../230-r-cran-data.table_1.16.4+dfsg-1_amd64.deb ... 109s Unpacking r-cran-data.table (1.16.4+dfsg-1) ... 109s Selecting previously unselected package r-cran-modelmetrics. 109s Preparing to unpack .../231-r-cran-modelmetrics_1.2.2.2-1build1_amd64.deb ... 109s Unpacking r-cran-modelmetrics (1.2.2.2-1build1) ... 109s Selecting previously unselected package r-cran-proc. 109s Preparing to unpack .../232-r-cran-proc_1.18.5-1_amd64.deb ... 109s Unpacking r-cran-proc (1.18.5-1) ... 109s Selecting previously unselected package r-cran-tzdb. 109s Preparing to unpack .../233-r-cran-tzdb_0.4.0-2_amd64.deb ... 109s Unpacking r-cran-tzdb (0.4.0-2) ... 109s Selecting previously unselected package r-cran-clock. 109s Preparing to unpack .../234-r-cran-clock_0.7.1-1_amd64.deb ... 109s Unpacking r-cran-clock (0.7.1-1) ... 109s Selecting previously unselected package r-cran-gower. 109s Preparing to unpack .../235-r-cran-gower_1.0.1-1_amd64.deb ... 109s Unpacking r-cran-gower (1.0.1-1) ... 109s Selecting previously unselected package r-cran-hardhat. 109s Preparing to unpack .../236-r-cran-hardhat_1.4.0+dfsg-1_all.deb ... 109s Unpacking r-cran-hardhat (1.4.0+dfsg-1) ... 109s Selecting previously unselected package r-cran-rpart. 109s Preparing to unpack .../237-r-cran-rpart_4.1.24-1_amd64.deb ... 109s Unpacking r-cran-rpart (4.1.24-1) ... 109s Selecting previously unselected package r-cran-nnet. 109s Preparing to unpack .../238-r-cran-nnet_7.3-20-1_amd64.deb ... 109s Unpacking r-cran-nnet (7.3-20-1) ... 109s Selecting previously unselected package r-cran-shape. 109s Preparing to unpack .../239-r-cran-shape_1.4.6.1-1_all.deb ... 109s Unpacking r-cran-shape (1.4.6.1-1) ... 109s Selecting previously unselected package r-cran-diagram. 109s Preparing to unpack .../240-r-cran-diagram_1.6.5-2_all.deb ... 109s Unpacking r-cran-diagram (1.6.5-2) ... 109s Selecting previously unselected package r-cran-kernsmooth. 109s Preparing to unpack .../241-r-cran-kernsmooth_2.23-26-1_amd64.deb ... 109s Unpacking r-cran-kernsmooth (2.23-26-1) ... 109s Selecting previously unselected package r-cran-globals. 109s Preparing to unpack .../242-r-cran-globals_0.16.3-1_all.deb ... 109s Unpacking r-cran-globals (0.16.3-1) ... 109s Selecting previously unselected package r-cran-listenv. 109s Preparing to unpack .../243-r-cran-listenv_0.9.1+dfsg-1_all.deb ... 109s Unpacking r-cran-listenv (0.9.1+dfsg-1) ... 109s Selecting previously unselected package r-cran-parallelly. 109s Preparing to unpack .../244-r-cran-parallelly_1.38.0-1_amd64.deb ... 109s Unpacking r-cran-parallelly (1.38.0-1) ... 109s Selecting previously unselected package r-cran-future. 109s Preparing to unpack .../245-r-cran-future_1.34.0+dfsg-1_all.deb ... 109s Unpacking r-cran-future (1.34.0+dfsg-1) ... 110s Selecting previously unselected package r-cran-future.apply. 110s Preparing to unpack .../246-r-cran-future.apply_1.11.2+dfsg-1_all.deb ... 110s Unpacking r-cran-future.apply (1.11.2+dfsg-1) ... 110s Selecting previously unselected package r-cran-numderiv. 110s Preparing to unpack .../247-r-cran-numderiv_2016.8-1.1-3_all.deb ... 110s Unpacking r-cran-numderiv (2016.8-1.1-3) ... 110s Selecting previously unselected package r-cran-progressr. 110s Preparing to unpack .../248-r-cran-progressr_0.14.0-1_all.deb ... 110s Unpacking r-cran-progressr (0.14.0-1) ... 110s Selecting previously unselected package r-cran-squarem. 110s Preparing to unpack .../249-r-cran-squarem_2021.1-1_all.deb ... 110s Unpacking r-cran-squarem (2021.1-1) ... 110s Selecting previously unselected package r-cran-lava. 110s Preparing to unpack .../250-r-cran-lava_1.7.3+dfsg-1_all.deb ... 110s Unpacking r-cran-lava (1.7.3+dfsg-1) ... 110s Selecting previously unselected package r-cran-prodlim. 110s Preparing to unpack .../251-r-cran-prodlim_2024.06.25-1_amd64.deb ... 110s Unpacking r-cran-prodlim (2024.06.25-1) ... 110s Selecting previously unselected package r-cran-ipred. 110s Preparing to unpack .../252-r-cran-ipred_0.9-15-1_amd64.deb ... 110s Unpacking r-cran-ipred (0.9-15-1) ... 110s Selecting previously unselected package r-cran-timechange. 110s Preparing to unpack .../253-r-cran-timechange_0.3.0-1_amd64.deb ... 110s Unpacking r-cran-timechange (0.3.0-1) ... 110s Selecting previously unselected package r-cran-lubridate. 110s Preparing to unpack .../254-r-cran-lubridate_1.9.3+dfsg-1_amd64.deb ... 110s Unpacking r-cran-lubridate (1.9.3+dfsg-1) ... 110s Selecting previously unselected package r-cran-purrr. 110s Preparing to unpack .../255-r-cran-purrr_1.0.2-1_amd64.deb ... 110s Unpacking r-cran-purrr (1.0.2-1) ... 110s Selecting previously unselected package r-cran-tidyr. 110s Preparing to unpack .../256-r-cran-tidyr_1.3.1-1_amd64.deb ... 110s Unpacking r-cran-tidyr (1.3.1-1) ... 110s Selecting previously unselected package r-cran-timedate. 110s Preparing to unpack .../257-r-cran-timedate_4041.110-1_amd64.deb ... 110s Unpacking r-cran-timedate (4041.110-1) ... 110s Selecting previously unselected package r-cran-recipes. 110s Preparing to unpack .../258-r-cran-recipes_1.1.0+dfsg-1_all.deb ... 110s Unpacking r-cran-recipes (1.1.0+dfsg-1) ... 110s Selecting previously unselected package r-cran-caret. 110s Preparing to unpack .../259-r-cran-caret_6.0-94+dfsg-1_amd64.deb ... 110s Unpacking r-cran-caret (6.0-94+dfsg-1) ... 110s Selecting previously unselected package r-cran-catools. 110s Preparing to unpack .../260-r-cran-catools_1.18.2-1_amd64.deb ... 110s Unpacking r-cran-catools (1.18.2-1) ... 110s Selecting previously unselected package r-cran-evaluate. 110s Preparing to unpack .../261-r-cran-evaluate_1.0.0-1_all.deb ... 110s Unpacking r-cran-evaluate (1.0.0-1) ... 110s Selecting previously unselected package r-cran-xfun. 110s Preparing to unpack .../262-r-cran-xfun_0.49+dfsg-1_amd64.deb ... 110s Unpacking r-cran-xfun (0.49+dfsg-1) ... 110s Selecting previously unselected package r-cran-highr. 110s Preparing to unpack .../263-r-cran-highr_0.11+dfsg-1_all.deb ... 110s Unpacking r-cran-highr (0.11+dfsg-1) ... 110s Selecting previously unselected package libjs-mathjax. 110s Preparing to unpack .../264-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 110s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 111s Selecting previously unselected package r-cran-knitr. 111s Preparing to unpack .../265-r-cran-knitr_1.49+dfsg-1_all.deb ... 111s Unpacking r-cran-knitr (1.49+dfsg-1) ... 111s Selecting previously unselected package r-cran-fontawesome. 111s Preparing to unpack .../266-r-cran-fontawesome_0.5.2-1_all.deb ... 111s Unpacking r-cran-fontawesome (0.5.2-1) ... 111s Selecting previously unselected package r-cran-tinytex. 111s Preparing to unpack .../267-r-cran-tinytex_0.53-1_all.deb ... 111s Unpacking r-cran-tinytex (0.53-1) ... 111s Selecting previously unselected package libjs-modernizr. 111s Preparing to unpack .../268-libjs-modernizr_3.13.0-0.1_all.deb ... 111s Unpacking libjs-modernizr (3.13.0-0.1) ... 111s Selecting previously unselected package r-cran-later. 111s Preparing to unpack .../269-r-cran-later_1.3.2+dfsg-1_amd64.deb ... 111s Unpacking r-cran-later (1.3.2+dfsg-1) ... 111s Selecting previously unselected package r-cran-promises. 111s Preparing to unpack .../270-r-cran-promises_1.3.0+dfsg-1_amd64.deb ... 111s Unpacking r-cran-promises (1.3.0+dfsg-1) ... 111s Selecting previously unselected package r-cran-httpuv. 111s Preparing to unpack .../271-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 111s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 111s Selecting previously unselected package r-cran-xtable. 111s Preparing to unpack .../272-r-cran-xtable_1%3a1.8-4-2_all.deb ... 111s Unpacking r-cran-xtable (1:1.8-4-2) ... 111s Selecting previously unselected package r-cran-sourcetools. 111s Preparing to unpack .../273-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 111s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 112s Selecting previously unselected package r-cran-commonmark. 112s Preparing to unpack .../274-r-cran-commonmark_1.9.2-2_amd64.deb ... 112s Unpacking r-cran-commonmark (1.9.2-2) ... 112s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 112s Preparing to unpack .../275-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 112s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 112s Selecting previously unselected package r-cran-shiny. 112s Preparing to unpack .../276-r-cran-shiny_1.9.1+dfsg-1_all.deb ... 112s Unpacking r-cran-shiny (1.9.1+dfsg-1) ... 112s Selecting previously unselected package r-cran-rmarkdown. 112s Preparing to unpack .../277-r-cran-rmarkdown_2.28+dfsg-1_all.deb ... 112s Unpacking r-cran-rmarkdown (2.28+dfsg-1) ... 112s Selecting previously unselected package r-cran-htmlwidgets. 112s Preparing to unpack .../278-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 112s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 112s Selecting previously unselected package r-cran-miniui. 112s Preparing to unpack .../279-r-cran-miniui_0.1.1.1-3build1_all.deb ... 112s Unpacking r-cran-miniui (0.1.1.1-3build1) ... 112s Selecting previously unselected package r-cran-shinyjs. 112s Preparing to unpack .../280-r-cran-shinyjs_2.1.0-1_all.deb ... 112s Unpacking r-cran-shinyjs (2.1.0-1) ... 112s Selecting previously unselected package r-cran-colourpicker. 112s Preparing to unpack .../281-r-cran-colourpicker_1.3.0+dfsg-1_all.deb ... 112s Unpacking r-cran-colourpicker (1.3.0+dfsg-1) ... 112s Selecting previously unselected package r-cran-conquer. 112s Preparing to unpack .../282-r-cran-conquer_1.3.3-1_amd64.deb ... 112s Unpacking r-cran-conquer (1.3.3-1) ... 112s Selecting previously unselected package r-cran-cowplot. 112s Preparing to unpack .../283-r-cran-cowplot_1.1.3+dfsg-1_all.deb ... 112s Unpacking r-cran-cowplot (1.1.3+dfsg-1) ... 112s Selecting previously unselected package r-cran-lazyeval. 112s Preparing to unpack .../284-r-cran-lazyeval_0.2.2-1build1_amd64.deb ... 112s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 112s Selecting previously unselected package r-cran-crosstalk. 112s Preparing to unpack .../285-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 112s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 112s Selecting previously unselected package r-cran-deldir. 112s Preparing to unpack .../286-r-cran-deldir_2.0-4-1build1_amd64.deb ... 112s Unpacking r-cran-deldir (2.0-4-1build1) ... 112s Selecting previously unselected package r-cran-deoptimr. 112s Preparing to unpack .../287-r-cran-deoptimr_1.1-3-1-1_all.deb ... 112s Unpacking r-cran-deoptimr (1.1-3-1-1) ... 112s Selecting previously unselected package r-cran-desc. 112s Preparing to unpack .../288-r-cran-desc_1.4.3-1_all.deb ... 112s Unpacking r-cran-desc (1.4.3-1) ... 112s Selecting previously unselected package r-cran-diffobj. 112s Preparing to unpack .../289-r-cran-diffobj_0.3.5-1_amd64.deb ... 112s Unpacking r-cran-diffobj (0.3.5-1) ... 112s Selecting previously unselected package r-cran-dotcall64. 112s Preparing to unpack .../290-r-cran-dotcall64_1.1-1-1_amd64.deb ... 112s Unpacking r-cran-dotcall64 (1.1-1-1) ... 113s Selecting previously unselected package r-cran-sitmo. 113s Preparing to unpack .../291-r-cran-sitmo_2.0.2-1_amd64.deb ... 113s Unpacking r-cran-sitmo (2.0.2-1) ... 113s Selecting previously unselected package r-cran-dqrng. 113s Preparing to unpack .../292-r-cran-dqrng_0.3.2+dfsg-1_amd64.deb ... 113s Unpacking r-cran-dqrng (0.3.2+dfsg-1) ... 113s Selecting previously unselected package r-cran-fastdummies. 113s Preparing to unpack .../293-r-cran-fastdummies_1.7.4-1_all.deb ... 113s Unpacking r-cran-fastdummies (1.7.4-1) ... 113s Selecting previously unselected package r-cran-fitdistrplus. 113s Preparing to unpack .../294-r-cran-fitdistrplus_1.2-1-1_all.deb ... 113s Unpacking r-cran-fitdistrplus (1.2-1-1) ... 113s Selecting previously unselected package r-cran-fnn. 113s Preparing to unpack .../295-r-cran-fnn_1.1.4.1-1_amd64.deb ... 113s Unpacking r-cran-fnn (1.1.4.1-1) ... 113s Selecting previously unselected package r-cran-gtools. 113s Preparing to unpack .../296-r-cran-gtools_3.9.5-1_amd64.deb ... 113s Unpacking r-cran-gtools (3.9.5-1) ... 113s Selecting previously unselected package r-cran-gdata. 113s Preparing to unpack .../297-r-cran-gdata_3.0.1-1_all.deb ... 113s Unpacking r-cran-gdata (3.0.1-1) ... 113s Selecting previously unselected package r-cran-vipor. 113s Preparing to unpack .../298-r-cran-vipor_0.4.7-1_all.deb ... 113s Unpacking r-cran-vipor (0.4.7-1) ... 113s Selecting previously unselected package r-cran-ggbeeswarm. 113s Preparing to unpack .../299-r-cran-ggbeeswarm_0.7.2-1_all.deb ... 113s Unpacking r-cran-ggbeeswarm (0.7.2-1) ... 113s Selecting previously unselected package r-cran-png. 113s Preparing to unpack .../300-r-cran-png_0.1-8-1build2_amd64.deb ... 113s Unpacking r-cran-png (0.1-8-1build2) ... 113s Selecting previously unselected package r-cran-systemfonts. 113s Preparing to unpack .../301-r-cran-systemfonts_1.1.0-1_amd64.deb ... 113s Unpacking r-cran-systemfonts (1.1.0-1) ... 113s Selecting previously unselected package r-cran-textshaping. 113s Preparing to unpack .../302-r-cran-textshaping_0.3.7-2_amd64.deb ... 113s Unpacking r-cran-textshaping (0.3.7-2) ... 113s Selecting previously unselected package r-cran-ragg. 113s Preparing to unpack .../303-r-cran-ragg_1.3.3-1_amd64.deb ... 113s Unpacking r-cran-ragg (1.3.3-1) ... 113s Selecting previously unselected package r-cran-ggrastr. 113s Preparing to unpack .../304-r-cran-ggrastr_1.0.2-1_all.deb ... 113s Unpacking r-cran-ggrastr (1.0.2-1) ... 113s Selecting previously unselected package r-cran-ggrepel. 113s Preparing to unpack .../305-r-cran-ggrepel_0.9.5-2_amd64.deb ... 113s Unpacking r-cran-ggrepel (0.9.5-2) ... 113s Selecting previously unselected package r-cran-ggridges. 113s Preparing to unpack .../306-r-cran-ggridges_0.5.6-1_all.deb ... 113s Unpacking r-cran-ggridges (0.5.6-1) ... 113s Selecting previously unselected package r-cran-goftest. 113s Preparing to unpack .../307-r-cran-goftest_1.2-3-1_amd64.deb ... 113s Unpacking r-cran-goftest (1.2-3-1) ... 113s Selecting previously unselected package r-cran-gplots. 113s Preparing to unpack .../308-r-cran-gplots_3.2.0-1_all.deb ... 113s Unpacking r-cran-gplots (3.2.0-1) ... 113s Selecting previously unselected package r-cran-hdf5r. 113s Preparing to unpack .../309-r-cran-hdf5r_1.3.11+dfsg-1_amd64.deb ... 113s Unpacking r-cran-hdf5r (1.3.11+dfsg-1) ... 114s Selecting previously unselected package r-cran-rprojroot. 114s Preparing to unpack .../310-r-cran-rprojroot_2.0.4-1_all.deb ... 114s Unpacking r-cran-rprojroot (2.0.4-1) ... 114s Selecting previously unselected package r-cran-here. 114s Preparing to unpack .../311-r-cran-here_1.0.1-2_all.deb ... 114s Unpacking r-cran-here (1.0.1-2) ... 114s Selecting previously unselected package r-cran-ica. 114s Preparing to unpack .../312-r-cran-ica_1.0-3-1_all.deb ... 114s Unpacking r-cran-ica (1.0-3-1) ... 114s Selecting previously unselected package r-cran-kernlab. 114s Preparing to unpack .../313-r-cran-kernlab_0.9-33-1_amd64.deb ... 114s Unpacking r-cran-kernlab (0.9-33-1) ... 114s Selecting previously unselected package r-cran-rcpptoml. 114s Preparing to unpack .../314-r-cran-rcpptoml_0.2.2+dfsg-1_amd64.deb ... 114s Unpacking r-cran-rcpptoml (0.2.2+dfsg-1) ... 114s Selecting previously unselected package r-cran-reticulate. 114s Preparing to unpack .../315-r-cran-reticulate_1.39.0+dfsg-1_amd64.deb ... 114s Unpacking r-cran-reticulate (1.39.0+dfsg-1) ... 114s Selecting previously unselected package r-cran-leiden. 114s Preparing to unpack .../316-r-cran-leiden_0.4.3.1+dfsg-1_all.deb ... 114s Unpacking r-cran-leiden (0.4.3.1+dfsg-1) ... 114s Selecting previously unselected package r-cran-zoo. 114s Preparing to unpack .../317-r-cran-zoo_1.8-12-2_amd64.deb ... 114s Unpacking r-cran-zoo (1.8-12-2) ... 114s Selecting previously unselected package r-cran-lmtest. 114s Preparing to unpack .../318-r-cran-lmtest_0.9.40-1_amd64.deb ... 114s Unpacking r-cran-lmtest (0.9.40-1) ... 114s Selecting previously unselected package r-cran-mathjaxr. 114s Preparing to unpack .../319-r-cran-mathjaxr_1.6-0-1_all.deb ... 114s Unpacking r-cran-mathjaxr (1.6-0-1) ... 114s Selecting previously unselected package r-cran-matrixmodels. 114s Preparing to unpack .../320-r-cran-matrixmodels_0.5-3-1_all.deb ... 114s Unpacking r-cran-matrixmodels (0.5-3-1) ... 114s Selecting previously unselected package r-cran-rbibutils. 114s Preparing to unpack .../321-r-cran-rbibutils_2.3-1_amd64.deb ... 114s Unpacking r-cran-rbibutils (2.3-1) ... 114s Selecting previously unselected package r-cran-rdpack. 114s Preparing to unpack .../322-r-cran-rdpack_2.6.2-1_all.deb ... 114s Unpacking r-cran-rdpack (2.6.2-1) ... 114s Selecting previously unselected package r-cran-mnormt. 114s Preparing to unpack .../323-r-cran-mnormt_2.1.1-2_amd64.deb ... 114s Unpacking r-cran-mnormt (2.1.1-2) ... 114s Selecting previously unselected package r-cran-sparsem. 114s Preparing to unpack .../324-r-cran-sparsem_1.84-2-1_amd64.deb ... 114s Unpacking r-cran-sparsem (1.84-2-1) ... 114s Selecting previously unselected package r-cran-quantreg. 114s Preparing to unpack .../325-r-cran-quantreg_5.99.1-1_amd64.deb ... 114s Unpacking r-cran-quantreg (5.99.1-1) ... 114s Selecting previously unselected package r-cran-sn. 114s Preparing to unpack .../326-r-cran-sn_2.1.1-2_all.deb ... 114s Unpacking r-cran-sn (2.1.1-2) ... 114s Selecting previously unselected package r-cran-mvtnorm. 114s Preparing to unpack .../327-r-cran-mvtnorm_1.3-3-1_amd64.deb ... 114s Unpacking r-cran-mvtnorm (1.3-3-1) ... 114s Selecting previously unselected package r-cran-tfisher. 114s Preparing to unpack .../328-r-cran-tfisher_0.2.0-3_all.deb ... 114s Unpacking r-cran-tfisher (0.2.0-3) ... 115s Selecting previously unselected package r-cran-plotrix. 115s Preparing to unpack .../329-r-cran-plotrix_3.8-4-1_all.deb ... 115s Unpacking r-cran-plotrix (3.8-4-1) ... 115s Selecting previously unselected package r-cran-th.data. 115s Preparing to unpack .../330-r-cran-th.data_1.1-2-2_all.deb ... 115s Unpacking r-cran-th.data (1.1-2-2) ... 115s Selecting previously unselected package r-cran-sandwich. 115s Preparing to unpack .../331-r-cran-sandwich_3.1-1-1_all.deb ... 115s Unpacking r-cran-sandwich (3.1-1-1) ... 115s Selecting previously unselected package r-cran-multcomp. 115s Preparing to unpack .../332-r-cran-multcomp_1.4-26-2_all.deb ... 115s Unpacking r-cran-multcomp (1.4-26-2) ... 115s Selecting previously unselected package r-cran-mutoss. 115s Preparing to unpack .../333-r-cran-mutoss_0.1-13-1_all.deb ... 115s Unpacking r-cran-mutoss (0.1-13-1) ... 115s Selecting previously unselected package r-cran-robustbase. 115s Preparing to unpack .../334-r-cran-robustbase_0.99-4-1-1_amd64.deb ... 115s Unpacking r-cran-robustbase (0.99-4-1-1) ... 115s Selecting previously unselected package r-cran-qqconf. 115s Preparing to unpack .../335-r-cran-qqconf_1.3.2+dfsg-1_amd64.deb ... 115s Unpacking r-cran-qqconf (1.3.2+dfsg-1) ... 115s Selecting previously unselected package r-cran-metap. 115s Preparing to unpack .../336-r-cran-metap_1.11-1_all.deb ... 115s Unpacking r-cran-metap (1.11-1) ... 115s Selecting previously unselected package r-cran-plotly. 115s Preparing to unpack .../337-r-cran-plotly_4.10.4+dfsg-2_all.deb ... 115s Unpacking r-cran-plotly (4.10.4+dfsg-2) ... 115s Selecting previously unselected package r-cran-segmented. 115s Preparing to unpack .../338-r-cran-segmented_2.1-3-1_all.deb ... 115s Unpacking r-cran-segmented (2.1-3-1) ... 115s Selecting previously unselected package r-cran-mixtools. 115s Preparing to unpack .../339-r-cran-mixtools_2.0.0-1_amd64.deb ... 115s Unpacking r-cran-mixtools (2.0.0-1) ... 115s Selecting previously unselected package r-cran-patchwork. 115s Preparing to unpack .../340-r-cran-patchwork_1.3.0-1_all.deb ... 115s Unpacking r-cran-patchwork (1.3.0-1) ... 115s Selecting previously unselected package r-cran-pbapply. 115s Preparing to unpack .../341-r-cran-pbapply_1.7-2-1_all.deb ... 115s Unpacking r-cran-pbapply (1.7-2-1) ... 115s Selecting previously unselected package r-cran-pkgbuild. 115s Preparing to unpack .../342-r-cran-pkgbuild_1.4.4-1_all.deb ... 115s Unpacking r-cran-pkgbuild (1.4.4-1) ... 115s Selecting previously unselected package r-cran-pkgload. 115s Preparing to unpack .../343-r-cran-pkgload_1.4.0-1_all.deb ... 115s Unpacking r-cran-pkgload (1.4.0-1) ... 116s Selecting previously unselected package r-cran-polyclip. 116s Preparing to unpack .../344-r-cran-polyclip_1.10-7-1_amd64.deb ... 116s Unpacking r-cran-polyclip (1.10-7-1) ... 116s Selecting previously unselected package r-cran-praise. 116s Preparing to unpack .../345-r-cran-praise_1.0.0-4build1_all.deb ... 116s Unpacking r-cran-praise (1.0.0-4build1) ... 116s Selecting previously unselected package r-cran-r.methodss3. 116s Preparing to unpack .../346-r-cran-r.methodss3_1.8.2-1_all.deb ... 116s Unpacking r-cran-r.methodss3 (1.8.2-1) ... 116s Selecting previously unselected package r-cran-r.oo. 116s Preparing to unpack .../347-r-cran-r.oo_1.26.0-1_all.deb ... 116s Unpacking r-cran-r.oo (1.26.0-1) ... 116s Selecting previously unselected package r-cran-r.utils. 116s Preparing to unpack .../348-r-cran-r.utils_2.12.3-1_all.deb ... 116s Unpacking r-cran-r.utils (2.12.3-1) ... 116s Selecting previously unselected package r-cran-rcppannoy. 116s Preparing to unpack .../349-r-cran-rcppannoy_0.0.22-1_amd64.deb ... 116s Unpacking r-cran-rcppannoy (0.0.22-1) ... 116s Selecting previously unselected package r-cran-rcpphnsw. 116s Preparing to unpack .../350-r-cran-rcpphnsw_0.5.0+ds-1_amd64.deb ... 116s Unpacking r-cran-rcpphnsw (0.5.0+ds-1) ... 116s Selecting previously unselected package r-cran-rcppprogress. 116s Preparing to unpack .../351-r-cran-rcppprogress_0.4.2-2build1_all.deb ... 116s Unpacking r-cran-rcppprogress (0.4.2-2build1) ... 116s Selecting previously unselected package r-cran-rocr. 116s Preparing to unpack .../352-r-cran-rocr_1.0-11-3_all.deb ... 116s Unpacking r-cran-rocr (1.0-11-3) ... 116s Selecting previously unselected package r-cran-rspectra. 116s Preparing to unpack .../353-r-cran-rspectra_0.16-2-1_amd64.deb ... 116s Unpacking r-cran-rspectra (0.16-2-1) ... 116s Selecting previously unselected package r-cran-rsvd. 116s Preparing to unpack .../354-r-cran-rsvd_1.0.5-1_all.deb ... 116s Unpacking r-cran-rsvd (1.0.5-1) ... 116s Selecting previously unselected package r-cran-scattermore. 116s Preparing to unpack .../355-r-cran-scattermore_1.2-1_amd64.deb ... 116s Unpacking r-cran-scattermore (1.2-1) ... 116s Selecting previously unselected package r-cran-sctransform. 116s Preparing to unpack .../356-r-cran-sctransform_0.4.1-1_amd64.deb ... 116s Unpacking r-cran-sctransform (0.4.1-1) ... 116s Selecting previously unselected package r-cran-sp. 116s Preparing to unpack .../357-r-cran-sp_1%3a2.1-4+dfsg-1_amd64.deb ... 116s Unpacking r-cran-sp (1:2.1-4+dfsg-1) ... 116s Selecting previously unselected package r-cran-spam. 116s Preparing to unpack .../358-r-cran-spam_2.11-0-1_amd64.deb ... 116s Unpacking r-cran-spam (2.11-0-1) ... 116s Selecting previously 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Processing triggers for man-db (2.13.0-1) ... 121s Processing triggers for install-info (7.1.1-1) ... 122s Processing triggers for libc-bin (2.40-4ubuntu1) ... 123s autopkgtest [15:32:42]: test run-unit-test: [----------------------- 123s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 123s BEGIN TEST testthat.R 123s 123s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 123s Copyright (C) 2024 The R Foundation for Statistical Computing 123s Platform: x86_64-pc-linux-gnu 123s 123s R is free software and comes with ABSOLUTELY NO WARRANTY. 123s You are welcome to redistribute it under certain conditions. 123s Type 'license()' or 'licence()' for distribution details. 123s 123s R is a collaborative project with many contributors. 123s Type 'contributors()' for more information and 123s 'citation()' on how to cite R or R packages in publications. 123s 123s Type 'demo()' for some demos, 'help()' for on-line help, or 123s 'help.start()' for an HTML browser interface to help. 123s Type 'q()' to quit R. 123s 123s > library(testthat) 123s > library(Seurat) 123s Loading required package: SeuratObject 123s Loading required package: sp 125s ‘SeuratObject’ was built under R 4.4.1 but the current version is 125s 4.4.2; it is recomended that you reinstall ‘SeuratObject’ as the ABI 125s for R may have changed 125s ‘SeuratObject’ was built with package ‘Matrix’ 1.7.0 but the current 125s version is 1.7.1; it is recomended that you reinstall ‘SeuratObject’ as 125s the ABI for ‘Matrix’ may have changed 125s 125s Attaching package: ‘SeuratObject’ 125s 125s The following objects are masked from ‘package:base’: 125s 125s intersect, t 125s 126s > # 126s > # # Run tests for 'v3' 126s > # message('Run tests for v3 assay') 126s > # options(Seurat.object.assay.version = 'v3') 126s > # test_check("Seurat") 126s > 126s > # Run tests for 'v5' 126s > message('Run tests for v5 assay') 126s > options(Seurat.object.assay.version = 'v5') 126s > test_check("Seurat") 126s Run tests for v5 assay 127s | | | 0% | |======================================================================| 100% 176s Performing log-normalization 176s 0% 10 20 30 40 50 60 70 80 90 100% 176s [----|----|----|----|----|----|----|----|----|----| 176s **************************************************| 176s Performing log-normalization 176s 0% 10 20 30 40 50 60 70 80 90 100% 176s [----|----|----|----|----|----|----|----|----|----| 176s **************************************************| 176s Performing log-normalization 176s 0% 10 20 30 40 50 60 70 80 90 100% 176s [----|----|----|----|----|----|----|----|----|----| 176s **************************************************| 183s | | | 0% | |======================================================================| 100% 185s | | | 0% | |======================================================================| 100% 185s | | | 0% | |======================================================================| 100% 208s Performing log-normalization 208s 0% 10 20 30 40 50 60 70 80 90 100% 208s [----|----|----|----|----|----|----|----|----|----| 208s **************************************************| 208s Calculating gene variances 208s 0% 10 20 30 40 50 60 70 80 90 100% 208s [----|----|----|----|----|----|----|----|----|----| 208s **************************************************| 208s Calculating feature variances of standardized and clipped values 208s 0% 10 20 30 40 50 60 70 80 90 100% 208s [----|----|----|----|----|----|----|----|----|----| 208s **************************************************| 209s | | | 0%Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck 209s 209s Number of nodes: 80 209s Number of edges: 2045 209s 209s Running Louvain algorithm... 209s Maximum modularity in 10 random starts: -0.0613 209s Number of communities: 64 209s Elapsed time: 0 seconds 209s | |======================================================================| 100% 209s 0% 10 20 30 40 50 60 70 80 90 100% 209s [----|----|----|----|----|----|----|----|----|----| 209s **************************************************| 209s Performing log-normalization 209s 0% 10 20 30 40 50 60 70 80 90 100% 209s [----|----|----|----|----|----|----|----|----|----| 209s **************************************************| 209s | | | 0% | |======================================================================| 100% 209s | | | 0% | |======================================================================| 100% 210s | | | 0% | |======================================================================| 100% 211s | | | 0% | |======================================================================| 100% 212s | | | 0% | |======================================================================| 100% 212s [ FAIL 0 | WARN 210 | SKIP 32 | PASS 661 ] 212s 212s ══ Skipped tests (32) ══════════════════════════════════════════════════════════ 213s • arrow cannot be loaded (1): 'test_load_10X.R:179:3' 213s • On CRAN (29): 'test_differential_expression.R:307:3', 213s 'test_differential_expression.R:349:3', 213s 'test_differential_expression.R:446:3', 'test_dimensional_reduction.R:55:3', 213s 'test_integratedata.R:111:3', 'test_integration.R:74:3', 213s 'test_integration.R:105:3', 'test_integration.R:136:3', 213s 'test_integration.R:170:3', 'test_integration.R:202:3', 213s 'test_integration.R:234:3', 'test_integration.R:264:3', 213s 'test_integration.R:306:3', 'test_integration.R:335:3', 213s 'test_integration.R:365:3', 'test_integration5.R:38:3', 213s 'test_integration5.R:219:3', 'test_objects.R:6:3', 213s 'test_preprocessing.R:140:3', 'test_preprocessing.R:158:3', 213s 'test_preprocessing.R:433:3', 'test_preprocessing.R:554:3', 213s 'test_read_mtx.R:4:3', 'test_read_mtx.R:18:3', 'test_transferdata.R:65:3', 213s 'test_transferdata.R:88:3', 'test_transferdata.R:100:3', 213s 'test_transferdata.R:112:3', 'test_transferdata.R:128:3' 213s • sf cannot be loaded (2): 'test_spatial.R:115:3', 'test_spatial.R:266:3' 213s 213s [ FAIL 0 | WARN 210 | SKIP 32 | PASS 661 ] 213s > 213s > 213s > 213s autopkgtest [15:34:12]: test run-unit-test: -----------------------] 214s autopkgtest [15:34:13]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 214s run-unit-test PASS 214s autopkgtest [15:34:13]: test pkg-r-autopkgtest: preparing testbed 288s autopkgtest [15:35:27]: testbed dpkg architecture: amd64 288s autopkgtest [15:35:27]: testbed apt version: 2.9.18 289s autopkgtest [15:35:28]: @@@@@@@@@@@@@@@@@@@@ test bed setup 289s autopkgtest [15:35:28]: testbed release detected to be: plucky 290s autopkgtest [15:35:29]: updating testbed package index (apt update) 290s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 290s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 290s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 290s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 290s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [868 kB] 291s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 291s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.1 kB] 291s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [178 kB] 291s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [228 kB] 291s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [331 kB] 291s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [40.1 kB] 291s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/restricted i386 Packages [2408 B] 291s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [1095 kB] 291s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [468 kB] 291s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [4444 B] 291s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [24.9 kB] 291s Fetched 3337 kB in 1s (3204 kB/s) 292s Reading package lists... 292s Reading package lists... 293s Building dependency tree... 293s Reading state information... 293s Calculating upgrade... 293s The following packages will be upgraded: 293s libgudev-1.0-0 usb.ids 293s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 293s Need to get 239 kB of archives. 293s After this operation, 0 B of additional disk space will be used. 293s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 usb.ids all 2025.01.14-1 [223 kB] 294s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libgudev-1.0-0 amd64 1:238-6 [15.8 kB] 294s Fetched 239 kB in 0s (482 kB/s) 294s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75824 files and directories currently installed.) 294s Preparing to unpack .../usb.ids_2025.01.14-1_all.deb ... 294s Unpacking usb.ids (2025.01.14-1) over (2024.12.04-1) ... 294s Preparing to unpack .../libgudev-1.0-0_1%3a238-6_amd64.deb ... 294s Unpacking libgudev-1.0-0:amd64 (1:238-6) over (1:238-5ubuntu1) ... 294s Setting up usb.ids (2025.01.14-1) ... 294s Setting up libgudev-1.0-0:amd64 (1:238-6) ... 294s Processing triggers for libc-bin (2.40-4ubuntu1) ... 294s Reading package lists... 295s Building dependency tree... 295s Reading state information... 295s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 295s autopkgtest [15:35:34]: upgrading testbed (apt dist-upgrade and autopurge) 295s Reading package lists... 295s Building dependency tree... 295s Reading state information... 296s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 296s Starting 2 pkgProblemResolver with broken count: 0 296s Done 296s Entering ResolveByKeep 297s 297s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 297s Reading package lists... 297s Building dependency tree... 297s Reading state information... 297s Starting pkgProblemResolver with broken count: 0 297s Starting 2 pkgProblemResolver with broken count: 0 297s Done 298s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 301s Reading package lists... 301s Building dependency tree... 301s Reading state information... 301s Starting pkgProblemResolver with broken count: 11 301s Starting 2 pkgProblemResolver with broken count: 11 301s Investigating (0) r-bioc-s4vectors:amd64 < none -> 0.42.1+dfsg-2 @un puN Ib > 301s Broken r-bioc-s4vectors:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 301s Considering r-bioc-biocgenerics:amd64 49 as a solution to r-bioc-s4vectors:amd64 32 301s Re-Instated r-bioc-biocgenerics:amd64 301s Investigating (0) r-bioc-iranges:amd64 < none -> 2.38.1-1 @un puN Ib > 301s Broken r-bioc-iranges:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 301s Considering r-bioc-biocgenerics:amd64 32 as a solution to r-bioc-iranges:amd64 23 301s Investigating (0) r-bioc-genomeinfodb:amd64 < none -> 1.40.1+dfsg-1 @un puN Ib > 301s Broken r-bioc-genomeinfodb:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 301s Considering r-bioc-biocgenerics:amd64 32 as a solution to r-bioc-genomeinfodb:amd64 11 301s Broken r-bioc-genomeinfodb:amd64 Depends on r-bioc-ucsc.utils:amd64 < none | 1.0.0+ds-2 @un uH > (> 1.0.0+ds-1) 301s Considering r-bioc-ucsc.utils:amd64 0 as a solution to r-bioc-genomeinfodb:amd64 11 301s Reinst Failed because of protected r-bioc-biocgenerics:amd64 301s Considering r-bioc-ucsc.utils:amd64 0 as a solution to r-bioc-genomeinfodb:amd64 11 301s Broken r-bioc-genomeinfodb:amd64 Depends on r-bioc-genomeinfodbdata:amd64 < none | 1.2.13-2 @un uH > (>= 1.2.12) 301s Considering r-bioc-genomeinfodbdata:amd64 0 as a solution to r-bioc-genomeinfodb:amd64 11 301s Re-Instated r-bioc-genomeinfodbdata:amd64 301s Investigating (0) r-bioc-biobase:amd64 < none -> 2.64.0-4 @un puN Ib > 301s Broken r-bioc-biobase:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 301s Considering r-bioc-biocgenerics:amd64 32 as a solution to r-bioc-biobase:amd64 7 301s Investigating (0) r-bioc-xvector:amd64 < none -> 0.44.0-1 @un puN Ib > 301s Broken r-bioc-xvector:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 301s Considering r-bioc-biocgenerics:amd64 32 as a solution to r-bioc-xvector:amd64 6 301s Broken r-bioc-xvector:amd64 Depends on r-bioc-zlibbioc:amd64 < none | 1.50.0+dfsg-2 @un uH > (>= 1.50.0) 301s Considering r-bioc-zlibbioc:amd64 0 as a solution to r-bioc-xvector:amd64 6 301s Reinst Failed because of protected r-bioc-biocgenerics:amd64 301s Considering r-bioc-zlibbioc:amd64 0 as a solution to r-bioc-xvector:amd64 6 301s Investigating (0) r-bioc-delayedarray:amd64 < none -> 0.30.1+dfsg-1 @un puN Ib > 301s Broken r-bioc-delayedarray:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 301s Considering r-bioc-biocgenerics:amd64 32 as a solution to r-bioc-delayedarray:amd64 4 301s Broken r-bioc-delayedarray:amd64 Depends on r-bioc-matrixgenerics:amd64 < none | 1.16.0-2 @un uH > (>= 1.16.0) 301s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-delayedarray:amd64 4 301s Reinst Failed because of protected r-bioc-biocgenerics:amd64 301s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-delayedarray:amd64 4 301s Broken r-bioc-delayedarray:amd64 Depends on r-bioc-s4arrays:amd64 < none | 1.4.1+dfsg-1 @un uH > (>= 1.4.1) 301s Considering r-bioc-s4arrays:amd64 0 as a solution to r-bioc-delayedarray:amd64 4 301s Reinst Failed because of protected r-bioc-biocgenerics:amd64 301s Considering r-bioc-s4arrays:amd64 0 as a solution to r-bioc-delayedarray:amd64 4 301s Broken r-bioc-delayedarray:amd64 Depends on r-bioc-sparsearray:amd64 < none | 1.4.8+dfsg-1 @un uH > (>= 1.4.8) 301s Considering r-bioc-sparsearray:amd64 0 as a solution to r-bioc-delayedarray:amd64 4 301s Reinst Failed because of protected r-bioc-biocgenerics:amd64 301s Considering r-bioc-sparsearray:amd64 0 as a solution to r-bioc-delayedarray:amd64 4 301s Investigating (0) r-bioc-summarizedexperiment:amd64 < none -> 1.34.0+dfsg-1 @un puN Ib > 301s Broken r-bioc-summarizedexperiment:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 301s Considering r-bioc-biocgenerics:amd64 32 as a solution to r-bioc-summarizedexperiment:amd64 3 301s Broken r-bioc-summarizedexperiment:amd64 Depends on r-bioc-matrixgenerics:amd64 < none | 1.16.0-2 @un uH > (>= 1.16.0) 301s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-summarizedexperiment:amd64 3 301s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-summarizedexperiment:amd64 3 301s Broken r-bioc-summarizedexperiment:amd64 Depends on r-bioc-s4arrays:amd64 < none | 1.4.1+dfsg-1 @un uH > (>= 1.4.1) 301s Considering r-bioc-s4arrays:amd64 0 as a solution to r-bioc-summarizedexperiment:amd64 3 301s Considering r-bioc-s4arrays:amd64 0 as a solution to r-bioc-summarizedexperiment:amd64 3 301s Investigating (0) r-bioc-deseq2:amd64 < none -> 1.44.0+dfsg-1 @un puN Ib > 301s Broken r-bioc-deseq2:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 301s Considering r-bioc-biocgenerics:amd64 32 as a solution to r-bioc-deseq2:amd64 1 301s Broken r-bioc-deseq2:amd64 Depends on r-bioc-biocparallel:amd64 < none | 1.38.0-2 @un uH > (>= 1.38.0) 301s Considering r-bioc-biocparallel:amd64 0 as a solution to r-bioc-deseq2:amd64 1 301s Reinst Failed because of protected r-bioc-biocgenerics:amd64 301s Considering r-bioc-biocparallel:amd64 0 as a solution to r-bioc-deseq2:amd64 1 301s Broken r-bioc-deseq2:amd64 Depends on r-cran-locfit:amd64 < none | 1.5-9.10-1 @un uH > 301s Considering r-cran-locfit:amd64 2 as a solution to r-bioc-deseq2:amd64 1 301s Re-Instated r-cran-locfit:amd64 301s Broken r-bioc-deseq2:amd64 Depends on r-bioc-matrixgenerics:amd64 < none | 1.16.0-2 @un uH > (>= 1.16.0) 301s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-deseq2:amd64 1 301s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-deseq2:amd64 1 301s Investigating (0) r-bioc-rtracklayer:amd64 < none -> 1.64.0-1 @un puN Ib > 301s Broken r-bioc-rtracklayer:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 301s Considering r-bioc-biocgenerics:amd64 32 as a solution to r-bioc-rtracklayer:amd64 1 301s Broken r-bioc-rtracklayer:amd64 Depends on r-cran-xml:amd64 < none | 3.99-0.18-1 @un uH > (>= 1.98-0) 301s Considering r-cran-xml:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 301s Re-Instated r-cran-xml:amd64 301s Broken r-bioc-rtracklayer:amd64 Depends on r-bioc-biostrings:amd64 < none | 2.72.1+dfsg-1 @un uH > (>= 2.72.1) 301s Considering r-bioc-biostrings:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 301s Reinst Failed because of protected r-bioc-biocgenerics:amd64 301s Considering r-bioc-biostrings:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 301s Broken r-bioc-rtracklayer:amd64 Depends on r-bioc-zlibbioc:amd64 < none | 1.50.0+dfsg-2 @un uH > (>= 1.50.0) 301s Considering r-bioc-zlibbioc:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 301s Considering r-bioc-zlibbioc:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 301s Broken r-bioc-rtracklayer:amd64 Depends on r-bioc-rsamtools:amd64 < none | 2.20.0+dfsg-1 @un uH > (>= 2.20.0) 301s Considering r-bioc-rsamtools:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 301s Reinst Failed because of protected r-bioc-biocgenerics:amd64 301s Considering r-bioc-rsamtools:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 301s Broken r-bioc-rtracklayer:amd64 Depends on r-bioc-genomicalignments:amd64 < none | 1.40.0-1 @un uH > (>= 1.40.0) 301s Considering r-bioc-genomicalignments:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 301s Reinst Failed because of protected r-bioc-biocgenerics:amd64 301s Considering r-bioc-genomicalignments:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 301s Broken r-bioc-rtracklayer:amd64 Depends on r-bioc-biocio:amd64 < none | 1.14.0+dfsg-1 @un uH > (>= 1.14.0) 301s Considering r-bioc-biocio:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 301s Reinst Failed because of protected r-bioc-biocgenerics:amd64 301s Considering r-bioc-biocio:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 301s Broken r-bioc-rtracklayer:amd64 Depends on r-cran-restfulr:amd64 < none | 0.0.15-1 @un uH > (>= 0.0.13) 301s Considering r-cran-restfulr:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 301s Re-Instated r-cran-rcurl:amd64 301s Re-Instated r-cran-rjson:amd64 301s Re-Instated r-cran-restfulr:amd64 301s Investigating (0) r-bioc-limma:amd64 < none -> 3.60.6+dfsg-1 @un puN Ib > 301s Broken r-bioc-limma:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 301s Considering r-bioc-biocgenerics:amd64 32 as a solution to r-bioc-limma:amd64 1 301s Broken r-bioc-limma:amd64 Depends on r-cran-statmod:amd64 < none | 1.5.0-1 @un uH > 301s Considering r-cran-statmod:amd64 1 as a solution to r-bioc-limma:amd64 1 301s Re-Instated r-cran-statmod:amd64 301s Investigating (0) r-bioc-multtest:amd64 < none -> 2.60.0-1 @un puN Ib > 301s Broken r-bioc-multtest:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 301s Considering r-bioc-biocgenerics:amd64 32 as a solution to r-bioc-multtest:amd64 0 301s Done 301s Some packages could not be installed. This may mean that you have 301s requested an impossible situation or if you are using the unstable 301s distribution that some required packages have not yet been created 301s or been moved out of Incoming. 301s The following information may help to resolve the situation: 301s 301s The following packages have unmet dependencies: 301s r-bioc-biobase : Depends: r-api-bioc-3.19 301s r-bioc-delayedarray : Depends: r-api-bioc-3.19 301s Depends: r-bioc-matrixgenerics (>= 1.16.0) but it is not going to be installed 301s Depends: r-bioc-s4arrays (>= 1.4.1) but it is not going to be installed 301s Depends: r-bioc-sparsearray (>= 1.4.8) but it is not going to be installed 301s r-bioc-deseq2 : Depends: r-api-bioc-3.19 301s Depends: r-bioc-biocparallel (>= 1.38.0) but it is not going to be installed 301s Depends: r-bioc-matrixgenerics (>= 1.16.0) but it is not going to be installed 301s r-bioc-genomeinfodb : Depends: r-api-bioc-3.19 301s Depends: r-bioc-ucsc.utils (> 1.0.0+ds-1) but it is not going to be installed 301s r-bioc-iranges : Depends: r-api-bioc-3.19 301s r-bioc-limma : Depends: r-api-bioc-3.19 301s r-bioc-multtest : Depends: r-api-bioc-3.19 301s r-bioc-rtracklayer : Depends: r-api-bioc-3.19 301s Depends: r-bioc-biostrings (>= 2.72.1) but it is not going to be installed 301s Depends: r-bioc-zlibbioc (>= 1.50.0) but it is not going to be installed 301s Depends: r-bioc-rsamtools (>= 2.20.0) but it is not going to be installed 301s Depends: r-bioc-genomicalignments (>= 1.40.0) but it is not going to be installed 301s Depends: r-bioc-biocio (>= 1.14.0) but it is not going to be installed 301s r-bioc-s4vectors : Depends: r-api-bioc-3.19 301s r-bioc-summarizedexperiment : Depends: r-api-bioc-3.19 301s Depends: r-bioc-matrixgenerics (>= 1.16.0) but it is not going to be installed 301s Depends: r-bioc-s4arrays (>= 1.4.1) but it is not going to be installed 301s r-bioc-xvector : Depends: r-api-bioc-3.19 301s Depends: r-bioc-zlibbioc (>= 1.50.0) but it is not going to be installed 301s E: Unable to correct problems, you have held broken packages. 301s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from plucky-proposed 302s Reading package lists... 302s Building dependency tree... 302s Reading state information... 302s Starting pkgProblemResolver with broken count: 0 302s Starting 2 pkgProblemResolver with broken count: 0 302s Done 303s The following NEW packages will be installed: 303s build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu 303s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 303s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-14 303s g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 303s gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-14 303s gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools 303s javascript-common libamd3 libasan8 libblas-dev libblas3 libboost-dev 303s libboost1.83-dev libbz2-dev libcairo2 libcc1-0 libcolamd3 libdatrie1 303s libdeflate-dev libdeflate0 libfftw3-double3 libfontconfig1 libgcc-14-dev 303s libgfortran-14-dev libgfortran5 libglpk40 libgomp1 libgraphite2-3 303s libharfbuzz0b libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 303s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 303s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 303s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 303s libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js 303s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 303s libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 liblerc4 303s liblsan0 libltdl7 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev 303s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 303s libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 303s libpixman-1-0 libpkgconf3 libpng-dev libquadmath0 libreadline-dev 303s libsharpyuv0 libsm6 libstdc++-14-dev libsuitesparseconfig7 libtcl8.6 303s libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 303s libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 303s littler node-bootstrap-sass node-html5shiv node-normalize.css pandoc 303s pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 303s r-bioc-biobase r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 303s r-bioc-biostrings r-bioc-delayedarray r-bioc-deseq2 r-bioc-genomeinfodb 303s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicranges 303s r-bioc-iranges r-bioc-limma r-bioc-matrixgenerics r-bioc-multtest 303s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 303s r-bioc-s4vectors r-bioc-sparsearray r-bioc-summarizedexperiment 303s r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-ape 303s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-bitops r-cran-brio 303s r-cran-bslib r-cran-cachem r-cran-callr r-cran-caret r-cran-catools 303s r-cran-class r-cran-cli r-cran-clock r-cran-cluster r-cran-codetools 303s r-cran-colorspace r-cran-colourpicker r-cran-commonmark r-cran-conquer 303s r-cran-cowplot r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl 303s r-cran-data.table r-cran-deldir r-cran-deoptimr r-cran-desc r-cran-diagram 303s r-cran-diffobj r-cran-digest r-cran-dotcall64 r-cran-dplyr r-cran-dqrng 303s r-cran-e1071 r-cran-evaluate r-cran-fansi r-cran-farver r-cran-fastdummies 303s r-cran-fastmap r-cran-fitdistrplus r-cran-fnn r-cran-fontawesome 303s r-cran-foreach r-cran-formatr r-cran-fs r-cran-futile.logger 303s r-cran-futile.options r-cran-future r-cran-future.apply r-cran-gdata 303s r-cran-generics r-cran-ggplot2 r-cran-ggrepel r-cran-ggridges r-cran-globals 303s r-cran-glue r-cran-goftest r-cran-gower r-cran-gplots r-cran-gridextra 303s r-cran-gtable r-cran-gtools r-cran-hardhat r-cran-here r-cran-highr 303s r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-ica 303s r-cran-igraph r-cran-ipred r-cran-irlba r-cran-isoband r-cran-iterators 303s r-cran-jquerylib r-cran-jsonlite r-cran-kernlab r-cran-kernsmooth 303s r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later r-cran-lattice 303s r-cran-lava r-cran-lazyeval r-cran-leiden r-cran-lifecycle r-cran-listenv 303s r-cran-littler r-cran-lmtest r-cran-locfit r-cran-lubridate r-cran-magrittr 303s r-cran-mass r-cran-mathjaxr r-cran-matrix r-cran-matrixmodels 303s r-cran-matrixstats r-cran-memoise r-cran-metap r-cran-mgcv r-cran-mime 303s r-cran-miniui r-cran-mixtools r-cran-mnormt r-cran-modelmetrics 303s r-cran-multcomp r-cran-munsell r-cran-mutoss r-cran-mvtnorm r-cran-nlme 303s r-cran-nnet r-cran-numderiv r-cran-openssl r-cran-parallelly 303s r-cran-patchwork r-cran-pbapply r-cran-pillar r-cran-pkgbuild 303s r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plotly 303s r-cran-plotrix r-cran-plyr r-cran-png r-cran-polyclip r-cran-praise 303s r-cran-proc r-cran-processx r-cran-prodlim r-cran-progressr r-cran-promises 303s r-cran-proxy r-cran-ps r-cran-purrr r-cran-qqconf r-cran-quantreg 303s r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils r-cran-r6 r-cran-rann 303s r-cran-rappdirs r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp 303s r-cran-rcppannoy r-cran-rcpparmadillo r-cran-rcppeigen r-cran-rcpphnsw 303s r-cran-rcppprogress r-cran-rcpptoml r-cran-rcurl r-cran-rdpack 303s r-cran-recipes r-cran-reshape2 r-cran-restfulr r-cran-reticulate 303s r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-robustbase r-cran-rocr 303s r-cran-rpart r-cran-rprojroot r-cran-rspectra r-cran-rsvd r-cran-rtsne 303s r-cran-sandwich r-cran-sass r-cran-scales r-cran-scattermore 303s r-cran-sctransform r-cran-segmented r-cran-seurat r-cran-seuratobject 303s r-cran-shape r-cran-shiny r-cran-shinyjs r-cran-sitmo r-cran-sn r-cran-snow 303s r-cran-sourcetools r-cran-sp r-cran-spam r-cran-sparsem r-cran-spatstat.data 303s r-cran-spatstat.explore r-cran-spatstat.geom r-cran-spatstat.random 303s r-cran-spatstat.sparse r-cran-spatstat.utils r-cran-squarem r-cran-statmod 303s r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys r-cran-tensor 303s r-cran-testthat r-cran-tfisher r-cran-th.data r-cran-tibble r-cran-tidyr 303s r-cran-tidyselect r-cran-timechange r-cran-timedate r-cran-tinytex 303s r-cran-tzdb r-cran-utf8 r-cran-uwot r-cran-vctrs r-cran-vgam 303s r-cran-viridislite r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml 303s r-cran-xtable r-cran-yaml r-cran-zoo unzip x11-common xdg-utils zip 303s zlib1g-dev 303s The following packages will be upgraded: 303s gcc-14-base libatomic1 libgcc-s1 libpng16-16t64 libstdc++6 303s 5 upgraded, 386 newly installed, 0 to remove and 125 not upgraded. 303s Need to get 458 MB of archives. 303s After this operation, 1318 MB of additional disk space will be used. 303s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 gcc-14-base amd64 14.2.0-13ubuntu1 [53.0 kB] 303s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libstdc++6 amd64 14.2.0-13ubuntu1 [787 kB] 303s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libatomic1 amd64 14.2.0-13ubuntu1 [10.3 kB] 303s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libgcc-s1 amd64 14.2.0-13ubuntu1 [78.2 kB] 303s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpng16-16t64 amd64 1.6.45-1 [219 kB] 303s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 303s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 303s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-13ubuntu1 [11.9 MB] 304s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 cpp-14 amd64 14.2.0-13ubuntu1 [1032 B] 304s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [5452 B] 304s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.1.0-2ubuntu1 [22.4 kB] 304s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libcc1-0 amd64 14.2.0-13ubuntu1 [47.6 kB] 304s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libgomp1 amd64 14.2.0-13ubuntu1 [148 kB] 304s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libitm1 amd64 14.2.0-13ubuntu1 [29.1 kB] 304s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libasan8 amd64 14.2.0-13ubuntu1 [2998 kB] 304s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 liblsan0 amd64 14.2.0-13ubuntu1 [1317 kB] 304s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libtsan2 amd64 14.2.0-13ubuntu1 [2732 kB] 304s Get:18 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libubsan1 amd64 14.2.0-13ubuntu1 [1177 kB] 304s Get:19 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libhwasan0 amd64 14.2.0-13ubuntu1 [1634 kB] 304s Get:20 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libquadmath0 amd64 14.2.0-13ubuntu1 [153 kB] 304s Get:21 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libgcc-14-dev amd64 14.2.0-13ubuntu1 [2815 kB] 304s Get:22 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-13ubuntu1 [23.4 MB] 305s Get:23 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 gcc-14 amd64 14.2.0-13ubuntu1 [534 kB] 305s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1214 B] 305s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.1.0-2ubuntu1 [5000 B] 305s Get:26 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libstdc++-14-dev amd64 14.2.0-13ubuntu1 [2508 kB] 305s Get:27 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-13ubuntu1 [13.3 MB] 306s Get:28 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 g++-14 amd64 14.2.0-13ubuntu1 [21.1 kB] 306s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [966 B] 306s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.1.0-2ubuntu1 [1100 B] 306s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 306s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 dctrl-tools amd64 2.24-3build3 [106 kB] 306s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 306s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 306s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB] 306s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB] 306s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB] 306s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 306s Get:39 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 306s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 306s Get:41 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libgfortran5 amd64 14.2.0-13ubuntu1 [909 kB] 306s Get:42 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libgfortran-14-dev amd64 14.2.0-13ubuntu1 [965 kB] 306s Get:43 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-13ubuntu1 [12.5 MB] 307s Get:44 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 gfortran-14 amd64 14.2.0-13ubuntu1 [13.2 kB] 307s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1022 B] 307s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran amd64 4:14.1.0-2ubuntu1 [1172 B] 307s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 icu-devtools amd64 76.1-1ubuntu2 [237 kB] 307s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 11+nmu1 [5936 B] 307s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libsuitesparseconfig7 amd64 1:7.8.3+dfsg-2 [13.4 kB] 307s Get:50 http://ftpmaster.internal/ubuntu plucky/universe amd64 libamd3 amd64 1:7.8.3+dfsg-2 [31.1 kB] 307s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-4 [332 kB] 307s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas-dev amd64 3.12.0-4 [307 kB] 307s Get:53 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libboost1.83-dev amd64 1.83.0-4ubuntu2 [10.7 MB] 308s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost-dev amd64 1.83.0.2ubuntu1 [4468 B] 308s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libbz2-dev amd64 1.0.8-6 [33.8 kB] 308s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 308s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 308s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 308s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 308s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 308s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libcolamd3 amd64 1:7.8.3+dfsg-2 [19.5 kB] 308s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 308s Get:63 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB] 308s Get:64 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libdeflate-dev amd64 1.23-1 [71.7 kB] 308s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libfftw3-double3 amd64 3.3.10-2fakesync1build1 [839 kB] 308s Get:66 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libltdl7 amd64 2.5.4-2 [46.0 kB] 308s Get:67 http://ftpmaster.internal/ubuntu plucky/universe amd64 libglpk40 amd64 5.0-1build2 [369 kB] 308s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 308s Get:69 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB] 308s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 308s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 308s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 libicu-dev amd64 76.1-1ubuntu2 [12.6 MB] 309s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 309s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8-dev amd64 2.1.5-3ubuntu2 [324 kB] 309s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 309s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 309s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 309s Get:78 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 309s Get:79 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 309s Get:80 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 309s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 309s Get:82 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 309s Get:83 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 309s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 309s Get:85 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 309s Get:86 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 309s Get:87 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 309s Get:88 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 309s Get:89 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 309s Get:90 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 309s Get:91 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 309s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-4 [3177 kB] 309s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack-dev amd64 3.12.0-4 [6486 kB] 310s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 310s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 liblua5.4-0 amd64 5.4.7-1 [196 kB] 310s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses-dev amd64 6.5-2 [384 kB] 310s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 310s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 310s Get:99 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpango-1.0-0 amd64 1.56.0-3 [255 kB] 310s Get:100 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpangoft2-1.0-0 amd64 1.56.0-3 [52.5 kB] 310s Get:101 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpangocairo-1.0-0 amd64 1.56.0-3 [29.1 kB] 310s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB] 310s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB] 310s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.42-4ubuntu3 [214 kB] 311s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-32-0 amd64 10.42-4ubuntu3 [201 kB] 311s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-posix3 amd64 10.42-4ubuntu3 [6768 B] 311s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-dev amd64 10.42-4ubuntu3 [747 kB] 311s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 libpkgconf3 amd64 1.8.1-4 [32.3 kB] 311s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 311s Get:110 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpng-dev amd64 1.6.45-1 [300 kB] 311s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 libreadline-dev amd64 8.2-6 [184 kB] 311s Get:112 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 311s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 311s Get:114 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB] 311s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 311s Get:116 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 311s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 311s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 311s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 311s Get:120 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB] 311s Get:121 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 311s Get:122 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu1 [185 kB] 311s Get:123 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 311s Get:124 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 311s Get:125 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-base-core amd64 4.4.2-1build1 [28.9 MB] 312s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-2 [96.6 kB] 312s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-2 [2554 B] 312s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 312s Get:129 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 312s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 312s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 312s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc amd64 3.1.11.1+ds-2 [27.2 MB] 313s Get:133 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma-dev amd64 5.6.3-1 [189 kB] 313s Get:134 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf-bin amd64 1.8.1-4 [21.6 kB] 313s Get:135 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf amd64 1.8.1-4 [16.8 kB] 313s Get:136 http://ftpmaster.internal/ubuntu plucky/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3 [193 kB] 313s Get:137 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-base-dev all 4.4.2-1build1 [4342 B] 313s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 313s Get:139 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 313s Get:140 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-biobase amd64 2.66.0-2 [2332 kB] 313s Get:141 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2065 kB] 313s Get:142 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 313s Get:143 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-formatr all 1.14-2 [152 kB] 313s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 313s Get:145 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 313s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 313s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 313s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-codetools all 0.2-20-1 [90.5 kB] 313s Get:149 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bh all 1.84.0-1 [5962 B] 313s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cpp11 all 0.5.0-1 [221 kB] 313s Get:151 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-biocparallel amd64 1.40.0-2 [1337 kB] 313s Get:152 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-iranges amd64 2.40.1-2 [2310 kB] 313s Get:153 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 313s Get:154 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-xvector amd64 0.46.0-2 [620 kB] 313s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-curl amd64 5.2.3+dfsg-1ubuntu1 [180 kB] 313s Get:156 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.8.9+dfsg-1 [445 kB] 313s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 313s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB] 313s Get:159 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB] 313s Get:160 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-openssl amd64 2.2.0+dfsg-1 [405 kB] 314s Get:161 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB] 314s Get:162 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 314s Get:163 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 314s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 314s Get:165 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-genomeinfodb all 1.42.1+dfsg-2 [3883 kB] 314s Get:166 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.2-1 [164 kB] 314s Get:167 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-biostrings amd64 2.74.1+dfsg-2 [13.3 MB] 315s Get:168 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 315s Get:169 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrix amd64 1.7-1-1 [4199 kB] 315s Get:170 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixstats amd64 1.4.1-1 [513 kB] 315s Get:171 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-matrixgenerics all 1.18.0-2 [446 kB] 315s Get:172 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-abind all 1.4-8-1 [66.9 kB] 315s Get:173 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-s4arrays amd64 1.6.0+dfsg-2 [698 kB] 315s Get:174 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-sparsearray amd64 1.6.0+dfsg-2 [1392 kB] 315s Get:175 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-delayedarray amd64 0.32.0+dfsg-2 [2064 kB] 315s Get:176 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-genomicranges amd64 1.58.0+dfsg-2 [2083 kB] 315s Get:177 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 315s Get:178 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-locfit amd64 1.5-9.10-1 [518 kB] 315s Get:179 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.3-1 [1348 kB] 316s Get:180 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 316s Get:181 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.4-1 [1708 kB] 316s Get:182 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 316s Get:183 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 316s Get:184 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 316s Get:185 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-mass amd64 7.3-64-1 [1114 kB] 316s Get:186 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nlme amd64 3.1.166-1 [2314 kB] 316s Get:187 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB] 316s Get:188 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB] 316s Get:189 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 316s Get:190 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colorspace amd64 2.1-1+dfsg-1 [1563 kB] 316s Get:191 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-munsell all 0.5.1-1 [213 kB] 316s Get:192 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 316s Get:193 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridislite all 0.4.2-2 [1088 kB] 316s Get:194 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scales all 1.3.0-1 [603 kB] 316s Get:195 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 316s Get:196 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 316s Get:197 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 316s Get:198 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 316s Get:199 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 316s Get:200 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 316s Get:201 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-2 [415 kB] 316s Get:202 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 316s Get:203 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 317s Get:204 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 317s Get:205 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-rcpp amd64 1.0.14-1 [1998 kB] 317s Get:206 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpparmadillo amd64 14.2.2-1-1 [864 kB] 317s Get:207 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-deseq2 amd64 1.46.0+dfsg-2 [1250 kB] 317s Get:208 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bitops amd64 1.0-8-1 [30.3 kB] 317s Get:209 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-rhtslib amd64 3.2.0+dfsg-2 [1499 kB] 317s Get:210 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-rsamtools amd64 2.22.0+dfsg-2 [3745 kB] 317s Get:211 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-genomicalignments amd64 1.42.0-2 [2165 kB] 317s Get:212 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-statmod amd64 1.5.0-1 [295 kB] 317s Get:213 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-limma amd64 3.62.2+dfsg-1 [1969 kB] 318s Get:214 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-survival amd64 3.8-3-1 [8239 kB] 318s Get:215 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-multtest amd64 2.62.0-2 [844 kB] 318s Get:216 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xml amd64 3.99-0.18-1 [1748 kB] 318s Get:217 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcurl amd64 1.98-1.16+dfsg-1 [807 kB] 318s Get:218 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rjson amd64 0.2.23-1 [104 kB] 318s Get:219 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB] 318s Get:220 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-restfulr amd64 0.0.15-1 [380 kB] 318s Get:221 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-rtracklayer amd64 1.66.0-2 [5227 kB] 318s Get:222 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB] 318s Get:223 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ape amd64 5.8-1 [2923 kB] 318s Get:224 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 318s Get:225 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 318s Get:226 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 318s Get:227 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 318s Get:228 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 318s Get:229 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 318s Get:230 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 318s Get:231 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.4+dfsg-1 [245 kB] 318s Get:232 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 318s Get:233 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 318s Get:234 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.7.0+dfsg-1 [4255 kB] 319s Get:235 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ps amd64 1.8.0-1 [395 kB] 319s Get:236 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-processx amd64 3.8.4-1 [353 kB] 319s Get:237 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 319s Get:238 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-class amd64 7.3-23-1 [92.7 kB] 319s Get:239 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB] 319s Get:240 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-e1071 amd64 1.7-16-1 [565 kB] 319s Get:241 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-iterators all 1.0.14-1 [336 kB] 319s Get:242 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-foreach all 1.5.2-1 [124 kB] 319s Get:243 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-data.table amd64 1.16.4+dfsg-1 [2032 kB] 319s Get:244 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-modelmetrics amd64 1.2.2.2-1build1 [128 kB] 319s Get:245 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB] 319s Get:246 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proc amd64 1.18.5-1 [966 kB] 319s Get:247 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB] 319s Get:248 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB] 319s Get:249 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB] 319s Get:250 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tzdb amd64 0.4.0-2 [521 kB] 319s Get:251 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-clock amd64 0.7.1-1 [1804 kB] 319s Get:252 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gower amd64 1.0.1-1 [207 kB] 319s Get:253 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-hardhat all 1.4.0+dfsg-1 [565 kB] 319s Get:254 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rpart amd64 4.1.24-1 [670 kB] 319s Get:255 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nnet amd64 7.3-20-1 [116 kB] 319s Get:256 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shape all 1.4.6.1-1 [749 kB] 319s Get:257 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diagram all 1.6.5-2 [656 kB] 319s Get:258 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernsmooth amd64 2.23-26-1 [94.5 kB] 319s Get:259 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-globals all 0.16.3-1 [120 kB] 319s Get:260 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-listenv all 0.9.1+dfsg-1 [112 kB] 319s Get:261 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-parallelly amd64 1.38.0-1 [385 kB] 319s Get:262 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-future all 1.34.0+dfsg-1 [646 kB] 319s Get:263 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-future.apply all 1.11.2+dfsg-1 [172 kB] 319s Get:264 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-numderiv all 2016.8-1.1-3 [115 kB] 319s Get:265 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-progressr all 0.14.0-1 [338 kB] 319s Get:266 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-squarem all 2021.1-1 [179 kB] 319s Get:267 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lava all 1.7.3+dfsg-1 [2166 kB] 319s Get:268 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-prodlim amd64 2024.06.25-1 [415 kB] 319s Get:269 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ipred amd64 0.9-15-1 [386 kB] 319s Get:270 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-timechange amd64 0.3.0-1 [178 kB] 319s Get:271 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lubridate amd64 1.9.3+dfsg-1 [1010 kB] 319s Get:272 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-purrr amd64 1.0.2-1 [502 kB] 319s Get:273 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-stringi amd64 1.8.4-1build1 [927 kB] 319s Get:274 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 319s Get:275 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 319s Get:276 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-timedate amd64 4041.110-1 [1208 kB] 319s Get:277 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-recipes all 1.1.0+dfsg-1 [2035 kB] 319s Get:278 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reshape2 amd64 1.4.4-2build1 [114 kB] 319s Get:279 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-caret amd64 6.0-94+dfsg-1 [3434 kB] 320s Get:280 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-catools amd64 1.18.2-1 [201 kB] 320s Get:281 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cluster amd64 2.1.8-1 [579 kB] 320s Get:282 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 1.0.0-1 [111 kB] 320s Get:283 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xfun amd64 0.49+dfsg-1 [545 kB] 320s Get:284 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 320s Get:285 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 320s Get:286 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 320s Get:287 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 320s Get:288 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tinytex all 0.53-1 [145 kB] 320s Get:289 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-modernizr all 3.13.0-0.1 [101 kB] 320s Get:290 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.3.2+dfsg-1 [123 kB] 320s Get:291 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.0+dfsg-1 [287 kB] 320s Get:292 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 320s Get:293 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 320s Get:294 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 320s Get:295 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.2-2 [137 kB] 320s Get:296 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 320s Get:297 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.9.1+dfsg-1 [3111 kB] 320s Get:298 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rmarkdown all 2.28+dfsg-1 [1501 kB] 320s Get:299 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 320s Get:300 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-miniui all 0.1.1.1-3build1 [36.1 kB] 320s Get:301 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shinyjs all 2.1.0-1 [967 kB] 320s Get:302 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colourpicker all 1.3.0+dfsg-1 [1191 kB] 321s Get:303 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-conquer amd64 1.3.3-1 [499 kB] 321s Get:304 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cowplot all 1.1.3+dfsg-1 [614 kB] 321s Get:305 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lazyeval amd64 0.2.2-1build1 [144 kB] 321s Get:306 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 321s Get:307 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-deldir amd64 2.0-4-1build1 [270 kB] 321s Get:308 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-deoptimr all 1.1-3-1-1 [76.6 kB] 321s Get:309 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 321s Get:310 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 321s Get:311 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dotcall64 amd64 1.1-1-1 [38.1 kB] 321s Get:312 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sitmo amd64 2.0.2-1 [130 kB] 321s Get:313 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dqrng amd64 0.3.2+dfsg-1 [161 kB] 321s Get:314 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastdummies all 1.7.4-1 [49.7 kB] 321s Get:315 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fitdistrplus all 1.2-1-1 [2038 kB] 321s Get:316 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fnn amd64 1.1.4.1-1 [126 kB] 321s Get:317 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtools amd64 3.9.5-1 [340 kB] 321s Get:318 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gdata all 3.0.1-1 [491 kB] 321s Get:319 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggrepel amd64 0.9.5-2 [254 kB] 321s Get:320 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggridges all 0.5.6-1 [2195 kB] 321s Get:321 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-goftest amd64 1.2-3-1 [59.5 kB] 321s Get:322 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gplots all 3.2.0-1 [484 kB] 321s Get:323 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gridextra all 2.3-3build1 [1024 kB] 322s Get:324 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rprojroot all 2.0.4-1 [124 kB] 322s Get:325 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-here all 1.0.1-2 [50.3 kB] 322s Get:326 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ica all 1.0-3-1 [85.4 kB] 322s Get:327 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-igraph amd64 2.0.3-1 [5098 kB] 322s Get:328 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-irlba amd64 2.3.5.1-4 [295 kB] 322s Get:329 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernlab amd64 0.9-33-1 [1947 kB] 322s Get:330 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpptoml amd64 0.2.2+dfsg-1 [110 kB] 322s Get:331 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-png amd64 0.1-8-1build2 [40.6 kB] 322s Get:332 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reticulate amd64 1.39.0+dfsg-1 [1238 kB] 322s Get:333 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-leiden all 0.4.3.1+dfsg-1 [71.9 kB] 322s Get:334 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-zoo amd64 1.8-12-2 [984 kB] 322s Get:335 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lmtest amd64 0.9.40-1 [396 kB] 322s Get:336 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mathjaxr all 1.6-0-1 [605 kB] 322s Get:337 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixmodels all 0.5-3-1 [361 kB] 322s Get:338 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rbibutils amd64 2.3-1 [1023 kB] 322s Get:339 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rdpack all 2.6.2-1 [757 kB] 322s Get:340 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mnormt amd64 2.1.1-2 [170 kB] 322s Get:341 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sparsem amd64 1.84-2-1 [813 kB] 322s Get:342 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-quantreg amd64 5.99.1-1 [1455 kB] 322s Get:343 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sn all 2.1.1-2 [1815 kB] 322s Get:344 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-mvtnorm amd64 1.3-3-1 [923 kB] 322s Get:345 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tfisher all 0.2.0-3 [79.8 kB] 322s Get:346 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plotrix all 3.8-4-1 [1120 kB] 322s Get:347 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-th.data all 1.1-2-2 [8794 kB] 322s Get:348 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sandwich all 3.1-1-1 [1483 kB] 322s Get:349 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-multcomp all 1.4-26-2 [699 kB] 322s Get:350 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mutoss all 0.1-13-1 [1123 kB] 322s Get:351 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-robustbase amd64 0.99-4-1-1 [3038 kB] 322s Get:352 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-qqconf amd64 1.3.2+dfsg-1 [157 kB] 322s Get:353 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-metap all 1.11-1 [570 kB] 322s Get:354 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plotly all 4.10.4+dfsg-2 [3666 kB] 323s Get:355 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-segmented all 2.1-3-1 [1366 kB] 323s Get:356 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mixtools amd64 2.0.0-1 [1399 kB] 323s Get:357 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-patchwork all 1.3.0-1 [3220 kB] 323s Get:358 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pbapply all 1.7-2-1 [102 kB] 323s Get:359 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgbuild all 1.4.4-1 [212 kB] 323s Get:360 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgload all 1.4.0-1 [247 kB] 323s Get:361 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-polyclip amd64 1.10-7-1 [116 kB] 323s Get:362 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 323s Get:363 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 323s Get:364 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.oo all 1.26.0-1 [955 kB] 323s Get:365 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.utils all 2.12.3-1 [1386 kB] 323s Get:366 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rann amd64 2.6.2-1 [46.3 kB] 323s Get:367 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppannoy amd64 0.0.22-1 [235 kB] 323s Get:368 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1428 kB] 323s Get:369 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpphnsw amd64 0.5.0+ds-1 [171 kB] 323s Get:370 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppprogress all 0.4.2-2build1 [22.0 kB] 323s Get:371 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rocr all 1.0-11-3 [456 kB] 323s Get:372 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rspectra amd64 0.16-2-1 [448 kB] 323s Get:373 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rsvd all 1.0.5-1 [3589 kB] 323s Get:374 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rtsne amd64 0.17-1 [109 kB] 323s Get:375 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scattermore amd64 1.2-1 [331 kB] 323s Get:376 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sctransform amd64 0.4.1-1 [504 kB] 323s Get:377 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sp amd64 1:2.1-4+dfsg-1 [1472 kB] 323s Get:378 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spam amd64 2.11-0-1 [2758 kB] 323s Get:379 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-seuratobject amd64 5.0.2-1 [1744 kB] 323s Get:380 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.utils amd64 3.1-0-1 [381 kB] 323s Get:381 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.data all 3.1-2-1 [4039 kB] 323s Get:382 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.geom amd64 3.2-9-2 [3946 kB] 323s Get:383 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.random amd64 3.2-3-1 [1169 kB] 323s Get:384 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tensor all 1.5-4 [15.7 kB] 323s Get:385 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.sparse amd64 3.0-3-1 [215 kB] 323s Get:386 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.explore amd64 3.2-7-1 [3432 kB] 323s Get:387 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-uwot amd64 0.2.2-1 [947 kB] 324s Get:388 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-seurat amd64 5.1.0-1 [3255 kB] 324s Get:389 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-waldo all 0.6.1-1 [150 kB] 324s Get:390 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-testthat amd64 3.2.1.1-1 [1636 kB] 324s Get:391 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vgam amd64 1.1-11-1 [7726 kB] 325s Preconfiguring packages ... 325s Fetched 458 MB in 21s (21.7 MB/s) 325s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75824 files and directories currently installed.) 325s Preparing to unpack .../gcc-14-base_14.2.0-13ubuntu1_amd64.deb ... 325s Unpacking gcc-14-base:amd64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 325s Setting up gcc-14-base:amd64 (14.2.0-13ubuntu1) ... 325s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75824 files and directories currently installed.) 325s Preparing to unpack .../libstdc++6_14.2.0-13ubuntu1_amd64.deb ... 325s Unpacking libstdc++6:amd64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 325s Setting up libstdc++6:amd64 (14.2.0-13ubuntu1) ... 325s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75824 files and directories currently installed.) 325s Preparing to unpack .../libatomic1_14.2.0-13ubuntu1_amd64.deb ... 325s Unpacking libatomic1:amd64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 325s Preparing to unpack .../libgcc-s1_14.2.0-13ubuntu1_amd64.deb ... 325s Unpacking libgcc-s1:amd64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 325s Setting up libgcc-s1:amd64 (14.2.0-13ubuntu1) ... 325s (Reading database ... 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previously unselected package libubsan1:amd64. 326s Preparing to unpack .../013-libubsan1_14.2.0-13ubuntu1_amd64.deb ... 326s Unpacking libubsan1:amd64 (14.2.0-13ubuntu1) ... 326s Selecting previously unselected package libhwasan0:amd64. 326s Preparing to unpack .../014-libhwasan0_14.2.0-13ubuntu1_amd64.deb ... 326s Unpacking libhwasan0:amd64 (14.2.0-13ubuntu1) ... 326s Selecting previously unselected package libquadmath0:amd64. 326s Preparing to unpack .../015-libquadmath0_14.2.0-13ubuntu1_amd64.deb ... 326s Unpacking libquadmath0:amd64 (14.2.0-13ubuntu1) ... 326s Selecting previously unselected package libgcc-14-dev:amd64. 326s Preparing to unpack .../016-libgcc-14-dev_14.2.0-13ubuntu1_amd64.deb ... 326s Unpacking libgcc-14-dev:amd64 (14.2.0-13ubuntu1) ... 326s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 326s Preparing to unpack .../017-gcc-14-x86-64-linux-gnu_14.2.0-13ubuntu1_amd64.deb ... 326s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-13ubuntu1) ... 326s 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unselected package g++-14. 327s Preparing to unpack .../023-g++-14_14.2.0-13ubuntu1_amd64.deb ... 327s Unpacking g++-14 (14.2.0-13ubuntu1) ... 327s Selecting previously unselected package g++-x86-64-linux-gnu. 327s Preparing to unpack .../024-g++-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 327s Unpacking g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 327s Selecting previously unselected package g++. 327s Preparing to unpack .../025-g++_4%3a14.1.0-2ubuntu1_amd64.deb ... 327s Unpacking g++ (4:14.1.0-2ubuntu1) ... 327s Selecting previously unselected package build-essential. 327s Preparing to unpack .../026-build-essential_12.10ubuntu1_amd64.deb ... 327s Unpacking build-essential (12.10ubuntu1) ... 327s Selecting previously unselected package dctrl-tools. 327s Preparing to unpack .../027-dctrl-tools_2.24-3build3_amd64.deb ... 327s Unpacking dctrl-tools (2.24-3build3) ... 327s Selecting previously unselected package fonts-dejavu-mono. 327s Preparing to unpack .../028-fonts-dejavu-mono_2.37-8_all.deb ... 327s Unpacking fonts-dejavu-mono (2.37-8) ... 327s Selecting previously unselected package fonts-dejavu-core. 327s Preparing to unpack .../029-fonts-dejavu-core_2.37-8_all.deb ... 327s Unpacking fonts-dejavu-core (2.37-8) ... 327s Selecting previously unselected package fontconfig-config. 327s Preparing to unpack .../030-fontconfig-config_2.15.0-1.1ubuntu2_amd64.deb ... 327s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 327s Selecting previously unselected package libfontconfig1:amd64. 327s Preparing to unpack .../031-libfontconfig1_2.15.0-1.1ubuntu2_amd64.deb ... 327s Unpacking libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ... 327s Selecting previously unselected package fontconfig. 327s Preparing to unpack .../032-fontconfig_2.15.0-1.1ubuntu2_amd64.deb ... 327s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 327s Selecting previously unselected package fonts-font-awesome. 327s Preparing to unpack .../033-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 327s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 327s Selecting previously unselected package fonts-glyphicons-halflings. 327s Preparing to unpack .../034-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 327s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 327s Selecting previously unselected package fonts-mathjax. 327s Preparing to unpack .../035-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 327s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 327s Selecting previously unselected package libgfortran5:amd64. 327s Preparing to unpack .../036-libgfortran5_14.2.0-13ubuntu1_amd64.deb ... 327s Unpacking libgfortran5:amd64 (14.2.0-13ubuntu1) ... 327s Selecting previously unselected package libgfortran-14-dev:amd64. 327s Preparing to unpack .../037-libgfortran-14-dev_14.2.0-13ubuntu1_amd64.deb ... 327s Unpacking libgfortran-14-dev:amd64 (14.2.0-13ubuntu1) ... 327s Selecting previously unselected package gfortran-14-x86-64-linux-gnu. 327s Preparing to unpack .../038-gfortran-14-x86-64-linux-gnu_14.2.0-13ubuntu1_amd64.deb ... 327s Unpacking gfortran-14-x86-64-linux-gnu (14.2.0-13ubuntu1) ... 328s Selecting previously unselected package gfortran-14. 328s Preparing to unpack .../039-gfortran-14_14.2.0-13ubuntu1_amd64.deb ... 328s Unpacking gfortran-14 (14.2.0-13ubuntu1) ... 328s Selecting previously unselected package gfortran-x86-64-linux-gnu. 328s Preparing to unpack .../040-gfortran-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 328s Unpacking gfortran-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 328s Selecting previously unselected package gfortran. 328s Preparing to unpack .../041-gfortran_4%3a14.1.0-2ubuntu1_amd64.deb ... 328s Unpacking gfortran (4:14.1.0-2ubuntu1) ... 328s Selecting previously unselected package icu-devtools. 328s Preparing to unpack .../042-icu-devtools_76.1-1ubuntu2_amd64.deb ... 328s Unpacking icu-devtools (76.1-1ubuntu2) ... 328s Selecting previously unselected package javascript-common. 328s Preparing to unpack .../043-javascript-common_11+nmu1_all.deb ... 328s Unpacking javascript-common (11+nmu1) ... 328s Selecting previously unselected package libsuitesparseconfig7:amd64. 328s Preparing to unpack .../044-libsuitesparseconfig7_1%3a7.8.3+dfsg-2_amd64.deb ... 328s Unpacking libsuitesparseconfig7:amd64 (1:7.8.3+dfsg-2) ... 328s Selecting previously unselected package libamd3:amd64. 328s Preparing to unpack .../045-libamd3_1%3a7.8.3+dfsg-2_amd64.deb ... 328s Unpacking libamd3:amd64 (1:7.8.3+dfsg-2) ... 328s Selecting previously unselected package libblas3:amd64. 328s Preparing to unpack .../046-libblas3_3.12.0-4_amd64.deb ... 328s Unpacking libblas3:amd64 (3.12.0-4) ... 328s Selecting previously unselected package libblas-dev:amd64. 328s Preparing to unpack .../047-libblas-dev_3.12.0-4_amd64.deb ... 328s Unpacking libblas-dev:amd64 (3.12.0-4) ... 328s Selecting previously unselected package libboost1.83-dev:amd64. 328s Preparing to unpack .../048-libboost1.83-dev_1.83.0-4ubuntu2_amd64.deb ... 328s Unpacking libboost1.83-dev:amd64 (1.83.0-4ubuntu2) ... 330s Selecting previously unselected package libboost-dev:amd64. 330s Preparing to unpack .../049-libboost-dev_1.83.0.2ubuntu1_amd64.deb ... 330s Unpacking libboost-dev:amd64 (1.83.0.2ubuntu1) ... 330s Selecting previously unselected package libbz2-dev:amd64. 330s Preparing to unpack .../050-libbz2-dev_1.0.8-6_amd64.deb ... 330s Unpacking libbz2-dev:amd64 (1.0.8-6) ... 330s Selecting previously unselected package libpixman-1-0:amd64. 330s Preparing to unpack .../051-libpixman-1-0_0.44.0-3_amd64.deb ... 330s Unpacking libpixman-1-0:amd64 (0.44.0-3) ... 330s Selecting previously unselected package libxcb-render0:amd64. 330s Preparing to unpack .../052-libxcb-render0_1.17.0-2_amd64.deb ... 330s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 330s Selecting previously unselected package libxcb-shm0:amd64. 330s Preparing to unpack .../053-libxcb-shm0_1.17.0-2_amd64.deb ... 330s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 330s Selecting previously unselected package libxrender1:amd64. 330s Preparing to unpack .../054-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 330s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 330s Selecting previously unselected package libcairo2:amd64. 330s Preparing to unpack .../055-libcairo2_1.18.2-2_amd64.deb ... 330s Unpacking libcairo2:amd64 (1.18.2-2) ... 330s Selecting previously unselected package libcolamd3:amd64. 330s Preparing to unpack .../056-libcolamd3_1%3a7.8.3+dfsg-2_amd64.deb ... 330s Unpacking libcolamd3:amd64 (1:7.8.3+dfsg-2) ... 330s Selecting previously unselected package libdatrie1:amd64. 330s Preparing to unpack .../057-libdatrie1_0.2.13-3build1_amd64.deb ... 330s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 330s Selecting previously unselected package libdeflate0:amd64. 330s Preparing to unpack .../058-libdeflate0_1.23-1_amd64.deb ... 330s Unpacking libdeflate0:amd64 (1.23-1) ... 330s Selecting previously unselected package libdeflate-dev:amd64. 330s Preparing to unpack .../059-libdeflate-dev_1.23-1_amd64.deb ... 330s Unpacking libdeflate-dev:amd64 (1.23-1) ... 331s Selecting previously unselected package libfftw3-double3:amd64. 331s Preparing to unpack .../060-libfftw3-double3_3.3.10-2fakesync1build1_amd64.deb ... 331s Unpacking libfftw3-double3:amd64 (3.3.10-2fakesync1build1) ... 331s Selecting previously unselected package libltdl7:amd64. 331s Preparing to unpack .../061-libltdl7_2.5.4-2_amd64.deb ... 331s Unpacking libltdl7:amd64 (2.5.4-2) ... 331s Selecting previously unselected package libglpk40:amd64. 331s Preparing to unpack .../062-libglpk40_5.0-1build2_amd64.deb ... 331s Unpacking libglpk40:amd64 (5.0-1build2) ... 331s Selecting previously unselected package libgraphite2-3:amd64. 331s Preparing to unpack .../063-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 331s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 331s Selecting previously unselected package libharfbuzz0b:amd64. 331s Preparing to unpack .../064-libharfbuzz0b_10.2.0-1_amd64.deb ... 331s Unpacking libharfbuzz0b:amd64 (10.2.0-1) ... 331s Selecting previously unselected package x11-common. 331s Preparing to unpack .../065-x11-common_1%3a7.7+23ubuntu3_all.deb ... 331s Unpacking x11-common (1:7.7+23ubuntu3) ... 331s Selecting previously unselected package libice6:amd64. 331s Preparing to unpack .../066-libice6_2%3a1.1.1-1_amd64.deb ... 331s Unpacking libice6:amd64 (2:1.1.1-1) ... 331s Selecting previously unselected package libicu-dev:amd64. 331s Preparing to unpack .../067-libicu-dev_76.1-1ubuntu2_amd64.deb ... 331s Unpacking libicu-dev:amd64 (76.1-1ubuntu2) ... 331s Selecting previously unselected package libjpeg-turbo8:amd64. 331s Preparing to unpack .../068-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ... 331s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 331s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 331s Preparing to unpack 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package libjs-jquery-datatables. 331s Preparing to unpack .../080-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 331s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 331s Selecting previously unselected package libjs-sifter.js. 331s Preparing to unpack .../081-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 331s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 331s Selecting previously unselected package libjs-microplugin.js. 331s Preparing to unpack .../082-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 331s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 331s Selecting previously unselected package libjs-jquery-selectize.js. 331s Preparing to unpack .../083-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 331s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 331s Selecting previously unselected package libjs-jquery-ui. 331s Preparing to unpack .../084-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 331s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 332s Selecting previously unselected package libjs-json. 332s Preparing to unpack .../085-libjs-json_0~20221030+~1.0.8-1_all.deb ... 332s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 332s Selecting previously unselected package libjs-prettify. 332s Preparing to unpack .../086-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 332s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 332s Selecting previously unselected package liblapack3:amd64. 332s Preparing to unpack .../087-liblapack3_3.12.0-4_amd64.deb ... 332s Unpacking liblapack3:amd64 (3.12.0-4) ... 332s Selecting previously unselected package liblapack-dev:amd64. 332s Preparing to unpack .../088-liblapack-dev_3.12.0-4_amd64.deb ... 332s Unpacking liblapack-dev:amd64 (3.12.0-4) ... 332s Selecting previously unselected package liblerc4:amd64. 332s Preparing to unpack .../089-liblerc4_4.0.0+ds-5ubuntu1_amd64.deb ... 332s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 332s Selecting previously unselected package liblua5.4-0:amd64. 332s Preparing to unpack .../090-liblua5.4-0_5.4.7-1_amd64.deb ... 332s Unpacking liblua5.4-0:amd64 (5.4.7-1) ... 332s Selecting previously unselected package libncurses-dev:amd64. 332s Preparing to unpack .../091-libncurses-dev_6.5-2_amd64.deb ... 332s Unpacking libncurses-dev:amd64 (6.5-2) ... 332s Selecting previously unselected package libthai-data. 332s Preparing to unpack .../092-libthai-data_0.1.29-2build1_all.deb ... 332s Unpacking libthai-data (0.1.29-2build1) ... 332s Selecting previously unselected package libthai0:amd64. 332s Preparing to unpack .../093-libthai0_0.1.29-2build1_amd64.deb ... 332s Unpacking libthai0:amd64 (0.1.29-2build1) ... 332s Selecting previously unselected package libpango-1.0-0:amd64. 332s Preparing to unpack .../094-libpango-1.0-0_1.56.0-3_amd64.deb ... 332s Unpacking libpango-1.0-0:amd64 (1.56.0-3) ... 332s Selecting previously unselected package libpangoft2-1.0-0:amd64. 332s Preparing to unpack .../095-libpangoft2-1.0-0_1.56.0-3_amd64.deb ... 332s Unpacking libpangoft2-1.0-0:amd64 (1.56.0-3) ... 332s Selecting previously unselected package libpangocairo-1.0-0:amd64. 332s Preparing to unpack .../096-libpangocairo-1.0-0_1.56.0-3_amd64.deb ... 332s Unpacking libpangocairo-1.0-0:amd64 (1.56.0-3) ... 332s Selecting previously unselected package libpaper2:amd64. 332s Preparing to unpack .../097-libpaper2_2.2.5-0.3_amd64.deb ... 332s Unpacking libpaper2:amd64 (2.2.5-0.3) ... 332s Selecting previously unselected package libpaper-utils. 332s Preparing to unpack .../098-libpaper-utils_2.2.5-0.3_amd64.deb ... 332s Unpacking libpaper-utils (2.2.5-0.3) ... 332s Selecting previously unselected package libpcre2-16-0:amd64. 332s Preparing to unpack .../099-libpcre2-16-0_10.42-4ubuntu3_amd64.deb ... 332s Unpacking libpcre2-16-0:amd64 (10.42-4ubuntu3) ... 332s Selecting previously unselected package libpcre2-32-0:amd64. 332s Preparing to unpack .../100-libpcre2-32-0_10.42-4ubuntu3_amd64.deb ... 332s Unpacking libpcre2-32-0:amd64 (10.42-4ubuntu3) ... 332s Selecting previously unselected package libpcre2-posix3:amd64. 332s Preparing to unpack .../101-libpcre2-posix3_10.42-4ubuntu3_amd64.deb ... 332s Unpacking libpcre2-posix3:amd64 (10.42-4ubuntu3) ... 332s Selecting previously unselected package libpcre2-dev:amd64. 332s Preparing to unpack .../102-libpcre2-dev_10.42-4ubuntu3_amd64.deb ... 332s Unpacking libpcre2-dev:amd64 (10.42-4ubuntu3) ... 332s Selecting previously unselected package libpkgconf3:amd64. 332s Preparing to unpack .../103-libpkgconf3_1.8.1-4_amd64.deb ... 332s Unpacking libpkgconf3:amd64 (1.8.1-4) ... 332s Selecting previously unselected package zlib1g-dev:amd64. 332s Preparing to unpack .../104-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ... 332s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 332s Selecting previously unselected package libpng-dev:amd64. 332s Preparing to unpack .../105-libpng-dev_1.6.45-1_amd64.deb ... 332s Unpacking libpng-dev:amd64 (1.6.45-1) ... 332s Selecting previously unselected package libreadline-dev:amd64. 332s Preparing to unpack .../106-libreadline-dev_8.2-6_amd64.deb ... 332s Unpacking libreadline-dev:amd64 (8.2-6) ... 332s Selecting previously unselected package libsharpyuv0:amd64. 332s Preparing to unpack .../107-libsharpyuv0_1.5.0-0.1_amd64.deb ... 332s Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ... 332s Selecting previously unselected package libsm6:amd64. 332s Preparing to unpack .../108-libsm6_2%3a1.2.4-1_amd64.deb ... 332s Unpacking libsm6:amd64 (2:1.2.4-1) ... 332s Selecting previously unselected package libtcl8.6:amd64. 332s Preparing to unpack .../109-libtcl8.6_8.6.16+dfsg-1_amd64.deb ... 332s Unpacking libtcl8.6:amd64 (8.6.16+dfsg-1) ... 333s Selecting previously unselected package libjbig0:amd64. 333s Preparing to unpack .../110-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 333s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 333s Selecting previously unselected package libwebp7:amd64. 333s Preparing to unpack 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(1:1.2.1-1.2build1) ... 333s Selecting previously unselected package zip. 333s Preparing to unpack .../117-zip_3.0-14ubuntu1_amd64.deb ... 333s Unpacking zip (3.0-14ubuntu1) ... 333s Selecting previously unselected package unzip. 333s Preparing to unpack .../118-unzip_6.0-28ubuntu6_amd64.deb ... 333s Unpacking unzip (6.0-28ubuntu6) ... 333s Selecting previously unselected package xdg-utils. 333s Preparing to unpack .../119-xdg-utils_1.2.1-0ubuntu1_all.deb ... 333s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 333s Selecting previously unselected package r-base-core. 333s Preparing to unpack .../120-r-base-core_4.4.2-1build1_amd64.deb ... 333s Unpacking r-base-core (4.4.2-1build1) ... 333s Selecting previously unselected package r-cran-littler. 333s Preparing to unpack .../121-r-cran-littler_0.3.20-2_amd64.deb ... 333s Unpacking r-cran-littler (0.3.20-2) ... 333s Selecting previously unselected package littler. 333s Preparing to unpack .../122-littler_0.3.20-2_all.deb ... 333s Unpacking littler (0.3.20-2) ... 333s Selecting previously unselected package node-bootstrap-sass. 333s Preparing to unpack .../123-node-bootstrap-sass_3.4.3-2_all.deb ... 333s Unpacking node-bootstrap-sass (3.4.3-2) ... 333s Selecting previously unselected package node-html5shiv. 333s Preparing to unpack .../124-node-html5shiv_3.7.3+dfsg-5_all.deb ... 333s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 333s Selecting previously unselected package node-normalize.css. 333s Preparing to unpack .../125-node-normalize.css_8.0.1-5_all.deb ... 333s Unpacking node-normalize.css (8.0.1-5) ... 333s Selecting previously unselected package pandoc-data. 333s Preparing to unpack .../126-pandoc-data_3.1.11.1-3build1_all.deb ... 333s Unpacking pandoc-data (3.1.11.1-3build1) ... 334s Selecting previously unselected package pandoc. 334s Preparing to unpack .../127-pandoc_3.1.11.1+ds-2_amd64.deb ... 334s Unpacking pandoc (3.1.11.1+ds-2) ... 334s Selecting previously unselected package liblzma-dev:amd64. 334s Preparing to unpack .../128-liblzma-dev_5.6.3-1_amd64.deb ... 334s Unpacking liblzma-dev:amd64 (5.6.3-1) ... 334s Selecting previously unselected package pkgconf-bin. 334s Preparing to unpack .../129-pkgconf-bin_1.8.1-4_amd64.deb ... 334s Unpacking pkgconf-bin (1.8.1-4) ... 334s Selecting previously unselected package pkgconf:amd64. 334s Preparing to unpack .../130-pkgconf_1.8.1-4_amd64.deb ... 334s Unpacking pkgconf:amd64 (1.8.1-4) ... 334s Selecting previously unselected package libtirpc-dev:amd64. 334s Preparing to unpack .../131-libtirpc-dev_1.3.4+ds-1.3_amd64.deb ... 334s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1.3) ... 334s Selecting previously unselected package r-base-dev. 334s Preparing to unpack .../132-r-base-dev_4.4.2-1build1_all.deb ... 334s Unpacking r-base-dev (4.4.2-1build1) ... 334s Selecting previously unselected package pkg-r-autopkgtest. 334s Preparing to unpack .../133-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 334s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 334s Selecting previously unselected package r-bioc-biocgenerics. 334s Preparing to unpack .../134-r-bioc-biocgenerics_0.52.0-2_all.deb ... 334s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 334s Selecting previously unselected package r-bioc-biobase. 334s Preparing to unpack .../135-r-bioc-biobase_2.66.0-2_amd64.deb ... 334s Unpacking r-bioc-biobase (2.66.0-2) ... 334s Selecting previously unselected package r-bioc-s4vectors. 334s Preparing to unpack .../136-r-bioc-s4vectors_0.44.0+dfsg-2_amd64.deb ... 334s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 335s Selecting previously unselected package r-bioc-biocio. 335s Preparing to unpack .../137-r-bioc-biocio_1.16.0+dfsg-2_all.deb ... 335s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ... 335s Selecting previously unselected package r-cran-formatr. 335s Preparing to unpack .../138-r-cran-formatr_1.14-2_all.deb ... 335s Unpacking r-cran-formatr (1.14-2) ... 335s Selecting previously unselected package r-cran-lambda.r. 335s Preparing to unpack .../139-r-cran-lambda.r_1.2.4-2build1_all.deb ... 335s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 335s Selecting previously unselected package r-cran-futile.options. 335s Preparing to unpack .../140-r-cran-futile.options_1.0.1-3build1_all.deb ... 335s Unpacking r-cran-futile.options (1.0.1-3build1) ... 335s Selecting previously unselected package r-cran-futile.logger. 335s Preparing to unpack .../141-r-cran-futile.logger_1.4.3-4build1_all.deb ... 335s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 335s Selecting previously unselected package r-cran-snow. 335s Preparing to unpack .../142-r-cran-snow_1%3a0.4.4-2_all.deb ... 335s Unpacking r-cran-snow (1:0.4.4-2) ... 335s Selecting previously unselected package r-cran-codetools. 335s Preparing to unpack .../143-r-cran-codetools_0.2-20-1_all.deb ... 335s Unpacking r-cran-codetools (0.2-20-1) ... 335s Selecting previously unselected package r-cran-bh. 335s Preparing to unpack .../144-r-cran-bh_1.84.0-1_all.deb ... 335s Unpacking r-cran-bh (1.84.0-1) ... 335s Selecting previously unselected package r-cran-cpp11. 335s Preparing to unpack .../145-r-cran-cpp11_0.5.0-1_all.deb ... 335s Unpacking r-cran-cpp11 (0.5.0-1) ... 335s Selecting previously unselected package r-bioc-biocparallel. 335s Preparing to unpack .../146-r-bioc-biocparallel_1.40.0-2_amd64.deb ... 335s Unpacking r-bioc-biocparallel (1.40.0-2) ... 335s Selecting previously unselected package r-bioc-iranges. 335s Preparing to unpack .../147-r-bioc-iranges_2.40.1-2_amd64.deb ... 335s Unpacking r-bioc-iranges (2.40.1-2) ... 335s Selecting previously unselected package r-bioc-zlibbioc. 335s Preparing to unpack .../148-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 335s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 335s Selecting previously unselected package r-bioc-xvector. 335s Preparing to unpack .../149-r-bioc-xvector_0.46.0-2_amd64.deb ... 335s Unpacking r-bioc-xvector (0.46.0-2) ... 335s Selecting previously unselected package r-cran-curl. 335s Preparing to unpack .../150-r-cran-curl_5.2.3+dfsg-1ubuntu1_amd64.deb ... 335s Unpacking r-cran-curl (5.2.3+dfsg-1ubuntu1) ... 335s Selecting previously unselected package r-cran-jsonlite. 335s Preparing to unpack .../151-r-cran-jsonlite_1.8.9+dfsg-1_amd64.deb ... 335s Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ... 335s Selecting previously unselected package r-cran-mime. 335s Preparing to unpack .../152-r-cran-mime_0.12-2_amd64.deb ... 335s Unpacking r-cran-mime (0.12-2) ... 335s Selecting previously unselected package r-cran-sys. 335s Preparing to unpack .../153-r-cran-sys_3.4.3-1_amd64.deb ... 335s Unpacking r-cran-sys (3.4.3-1) ... 335s Selecting previously unselected package r-cran-askpass. 335s Preparing to unpack .../154-r-cran-askpass_1.2.1-1_amd64.deb ... 335s Unpacking r-cran-askpass (1.2.1-1) ... 335s Selecting previously unselected package r-cran-openssl. 335s Preparing to unpack .../155-r-cran-openssl_2.2.0+dfsg-1_amd64.deb ... 335s Unpacking r-cran-openssl (2.2.0+dfsg-1) ... 335s Selecting previously unselected package r-cran-r6. 335s Preparing to unpack .../156-r-cran-r6_2.5.1-1_all.deb ... 335s Unpacking r-cran-r6 (2.5.1-1) ... 335s Selecting previously unselected package r-cran-httr. 335s Preparing to unpack .../157-r-cran-httr_1.4.7+dfsg-1_all.deb ... 335s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 335s Selecting previously unselected package r-bioc-ucsc.utils. 335s Preparing to unpack .../158-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 335s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 335s Selecting previously unselected package r-bioc-genomeinfodbdata. 335s Preparing to unpack .../159-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 335s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 335s Selecting previously unselected package r-bioc-genomeinfodb. 335s Preparing to unpack .../160-r-bioc-genomeinfodb_1.42.1+dfsg-2_all.deb ... 335s Unpacking r-bioc-genomeinfodb (1.42.1+dfsg-2) ... 335s Selecting previously unselected package r-cran-crayon. 335s Preparing to unpack .../161-r-cran-crayon_1.5.2-1_all.deb ... 335s Unpacking r-cran-crayon (1.5.2-1) ... 335s Selecting previously unselected package r-bioc-biostrings. 335s Preparing to unpack .../162-r-bioc-biostrings_2.74.1+dfsg-2_amd64.deb ... 335s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 336s Selecting previously unselected package r-cran-lattice. 336s Preparing to unpack .../163-r-cran-lattice_0.22-6-1_amd64.deb ... 336s Unpacking r-cran-lattice (0.22-6-1) ... 336s Selecting previously unselected package r-cran-matrix. 336s Preparing to unpack .../164-r-cran-matrix_1.7-1-1_amd64.deb ... 336s Unpacking r-cran-matrix (1.7-1-1) ... 336s Selecting previously unselected package r-cran-matrixstats. 336s Preparing to unpack .../165-r-cran-matrixstats_1.4.1-1_amd64.deb ... 336s Unpacking r-cran-matrixstats (1.4.1-1) ... 336s Selecting previously unselected package r-bioc-matrixgenerics. 336s Preparing to unpack .../166-r-bioc-matrixgenerics_1.18.0-2_all.deb ... 336s Unpacking r-bioc-matrixgenerics (1.18.0-2) ... 336s Selecting previously unselected package r-cran-abind. 336s Preparing to unpack .../167-r-cran-abind_1.4-8-1_all.deb ... 336s Unpacking r-cran-abind (1.4-8-1) ... 336s Selecting previously unselected package r-bioc-s4arrays. 336s Preparing to unpack .../168-r-bioc-s4arrays_1.6.0+dfsg-2_amd64.deb ... 336s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 336s Selecting previously unselected package r-bioc-sparsearray. 336s Preparing to unpack .../169-r-bioc-sparsearray_1.6.0+dfsg-2_amd64.deb ... 336s Unpacking r-bioc-sparsearray (1.6.0+dfsg-2) ... 336s Selecting previously unselected package r-bioc-delayedarray. 336s Preparing to unpack .../170-r-bioc-delayedarray_0.32.0+dfsg-2_amd64.deb ... 336s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 336s Selecting previously unselected package r-bioc-genomicranges. 336s Preparing to unpack .../171-r-bioc-genomicranges_1.58.0+dfsg-2_amd64.deb ... 336s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 336s Selecting previously unselected package r-bioc-summarizedexperiment. 336s Preparing to unpack .../172-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 336s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 336s Selecting previously unselected package r-cran-locfit. 336s Preparing to unpack .../173-r-cran-locfit_1.5-9.10-1_amd64.deb ... 336s Unpacking r-cran-locfit (1.5-9.10-1) ... 336s Selecting previously unselected package r-cran-cli. 336s Preparing to unpack .../174-r-cran-cli_3.6.3-1_amd64.deb ... 336s Unpacking r-cran-cli (3.6.3-1) ... 336s Selecting previously unselected package r-cran-glue. 336s Preparing to unpack .../175-r-cran-glue_1.8.0-1_amd64.deb ... 336s Unpacking r-cran-glue (1.8.0-1) ... 336s Selecting previously unselected package r-cran-rlang. 336s Preparing to unpack .../176-r-cran-rlang_1.1.4-1_amd64.deb ... 336s Unpacking r-cran-rlang (1.1.4-1) ... 336s Selecting previously unselected package r-cran-lifecycle. 336s Preparing to unpack .../177-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 336s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 336s Selecting previously unselected package r-cran-gtable. 336s Preparing to unpack .../178-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 336s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 336s Selecting previously unselected package r-cran-isoband. 336s Preparing to unpack .../179-r-cran-isoband_0.2.7-1_amd64.deb ... 336s Unpacking r-cran-isoband (0.2.7-1) ... 336s Selecting previously unselected package r-cran-mass. 336s Preparing to unpack .../180-r-cran-mass_7.3-64-1_amd64.deb ... 336s Unpacking r-cran-mass (7.3-64-1) ... 336s Selecting previously unselected package r-cran-nlme. 336s Preparing to unpack .../181-r-cran-nlme_3.1.166-1_amd64.deb ... 336s Unpacking r-cran-nlme (3.1.166-1) ... 336s Selecting previously unselected package r-cran-mgcv. 336s Preparing to unpack .../182-r-cran-mgcv_1.9-1-1_amd64.deb ... 336s Unpacking r-cran-mgcv (1.9-1-1) ... 336s Selecting previously unselected package r-cran-farver. 337s Preparing to unpack .../183-r-cran-farver_2.1.2-1_amd64.deb ... 337s Unpacking r-cran-farver (2.1.2-1) ... 337s Selecting previously unselected package r-cran-labeling. 337s Preparing to unpack .../184-r-cran-labeling_0.4.3-1_all.deb ... 337s Unpacking r-cran-labeling (0.4.3-1) ... 337s Selecting previously unselected package r-cran-colorspace. 337s Preparing to unpack .../185-r-cran-colorspace_2.1-1+dfsg-1_amd64.deb ... 337s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 337s Selecting previously unselected package r-cran-munsell. 337s Preparing to unpack .../186-r-cran-munsell_0.5.1-1_all.deb ... 337s Unpacking r-cran-munsell (0.5.1-1) ... 337s Selecting previously unselected package r-cran-rcolorbrewer. 337s Preparing to unpack .../187-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 337s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 337s Selecting previously unselected package r-cran-viridislite. 337s Preparing to unpack .../188-r-cran-viridislite_0.4.2-2_all.deb ... 337s Unpacking r-cran-viridislite (0.4.2-2) ... 337s Selecting previously unselected package r-cran-scales. 337s Preparing to unpack .../189-r-cran-scales_1.3.0-1_all.deb ... 337s Unpacking r-cran-scales (1.3.0-1) ... 337s Selecting previously unselected package r-cran-fansi. 337s Preparing to unpack .../190-r-cran-fansi_1.0.5-1_amd64.deb ... 337s Unpacking r-cran-fansi (1.0.5-1) ... 337s Selecting previously unselected package r-cran-magrittr. 337s Preparing to unpack .../191-r-cran-magrittr_2.0.3-1_amd64.deb ... 337s Unpacking r-cran-magrittr (2.0.3-1) ... 337s Selecting previously unselected package r-cran-utf8. 337s Preparing to unpack .../192-r-cran-utf8_1.2.4-1_amd64.deb ... 337s Unpacking r-cran-utf8 (1.2.4-1) ... 337s Selecting previously unselected package r-cran-vctrs. 337s Preparing to unpack .../193-r-cran-vctrs_0.6.5-1_amd64.deb ... 337s Unpacking r-cran-vctrs (0.6.5-1) ... 337s Selecting previously unselected package r-cran-pillar. 337s Preparing to unpack .../194-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 337s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 337s Selecting previously unselected package r-cran-pkgconfig. 337s Preparing to unpack .../195-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 337s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 337s Selecting previously unselected package r-cran-tibble. 337s Preparing to unpack .../196-r-cran-tibble_3.2.1+dfsg-2_amd64.deb ... 337s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 337s Selecting previously unselected package r-cran-withr. 337s Preparing to unpack .../197-r-cran-withr_3.0.2+dfsg-1_all.deb ... 337s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 337s Selecting previously unselected package r-cran-ggplot2. 337s Preparing to unpack .../198-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 337s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 337s Selecting previously unselected package r-cran-pkgkitten. 337s Preparing to unpack .../199-r-cran-pkgkitten_0.2.4-1_all.deb ... 337s Unpacking r-cran-pkgkitten (0.2.4-1) ... 337s Selecting previously unselected package r-cran-rcpp. 337s Preparing to unpack .../200-r-cran-rcpp_1.0.14-1_amd64.deb ... 337s Unpacking r-cran-rcpp (1.0.14-1) ... 338s Selecting previously unselected package r-cran-rcpparmadillo. 338s Preparing to unpack .../201-r-cran-rcpparmadillo_14.2.2-1-1_amd64.deb ... 338s Unpacking r-cran-rcpparmadillo (14.2.2-1-1) ... 338s Selecting previously unselected package r-bioc-deseq2. 338s Preparing to unpack .../202-r-bioc-deseq2_1.46.0+dfsg-2_amd64.deb ... 338s Unpacking r-bioc-deseq2 (1.46.0+dfsg-2) ... 338s Selecting previously unselected package r-cran-bitops. 338s Preparing to unpack .../203-r-cran-bitops_1.0-8-1_amd64.deb ... 338s Unpacking r-cran-bitops (1.0-8-1) ... 338s Selecting previously unselected package r-bioc-rhtslib. 338s Preparing to unpack .../204-r-bioc-rhtslib_3.2.0+dfsg-2_amd64.deb ... 338s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 338s Selecting previously unselected package r-bioc-rsamtools. 338s Preparing to unpack .../205-r-bioc-rsamtools_2.22.0+dfsg-2_amd64.deb ... 338s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 338s Selecting previously unselected package r-bioc-genomicalignments. 338s Preparing to unpack .../206-r-bioc-genomicalignments_1.42.0-2_amd64.deb ... 338s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 338s Selecting previously unselected package r-cran-statmod. 338s Preparing to unpack .../207-r-cran-statmod_1.5.0-1_amd64.deb ... 338s Unpacking r-cran-statmod (1.5.0-1) ... 338s Selecting previously unselected package r-bioc-limma. 338s Preparing to unpack .../208-r-bioc-limma_3.62.2+dfsg-1_amd64.deb ... 338s Unpacking r-bioc-limma (3.62.2+dfsg-1) ... 338s Selecting previously unselected package r-cran-survival. 338s Preparing to unpack .../209-r-cran-survival_3.8-3-1_amd64.deb ... 338s Unpacking r-cran-survival (3.8-3-1) ... 338s Selecting previously unselected package r-bioc-multtest. 338s Preparing to unpack .../210-r-bioc-multtest_2.62.0-2_amd64.deb ... 338s Unpacking r-bioc-multtest (2.62.0-2) ... 338s Selecting previously unselected package r-cran-xml. 338s Preparing to unpack .../211-r-cran-xml_3.99-0.18-1_amd64.deb ... 338s Unpacking r-cran-xml (3.99-0.18-1) ... 338s Selecting previously unselected package r-cran-rcurl. 338s Preparing to unpack .../212-r-cran-rcurl_1.98-1.16+dfsg-1_amd64.deb ... 338s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 339s Selecting previously unselected package r-cran-rjson. 339s Preparing to unpack .../213-r-cran-rjson_0.2.23-1_amd64.deb ... 339s Unpacking r-cran-rjson (0.2.23-1) ... 339s Selecting previously unselected package r-cran-yaml. 339s Preparing to unpack .../214-r-cran-yaml_2.3.10-1_amd64.deb ... 339s Unpacking r-cran-yaml (2.3.10-1) ... 339s Selecting previously unselected package r-cran-restfulr. 339s Preparing to unpack .../215-r-cran-restfulr_0.0.15-1_amd64.deb ... 339s Unpacking r-cran-restfulr (0.0.15-1) ... 339s Selecting previously unselected package r-bioc-rtracklayer. 339s Preparing to unpack .../216-r-bioc-rtracklayer_1.66.0-2_amd64.deb ... 339s Unpacking r-bioc-rtracklayer (1.66.0-2) ... 339s Selecting previously unselected package r-cran-digest. 339s Preparing to unpack .../217-r-cran-digest_0.6.37-1_amd64.deb ... 339s Unpacking r-cran-digest (0.6.37-1) ... 339s Selecting previously unselected package r-cran-ape. 339s Preparing to unpack .../218-r-cran-ape_5.8-1_amd64.deb ... 339s Unpacking r-cran-ape (5.8-1) ... 339s Selecting previously unselected package r-cran-base64enc. 339s Preparing to unpack .../219-r-cran-base64enc_0.1-3-3_amd64.deb ... 339s Unpacking r-cran-base64enc (0.1-3-3) ... 339s Selecting previously unselected package r-cran-brio. 339s Preparing to unpack .../220-r-cran-brio_1.1.5-1_amd64.deb ... 339s Unpacking r-cran-brio (1.1.5-1) ... 339s Selecting previously unselected package r-cran-fastmap. 339s Preparing to unpack .../221-r-cran-fastmap_1.2.0-1_amd64.deb ... 339s Unpacking r-cran-fastmap (1.2.0-1) ... 339s Selecting previously unselected package r-cran-cachem. 339s Preparing to unpack .../222-r-cran-cachem_1.1.0-1_amd64.deb ... 339s Unpacking r-cran-cachem (1.1.0-1) ... 339s Selecting previously unselected package r-cran-htmltools. 339s Preparing to unpack .../223-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 339s Unpacking r-cran-htmltools (0.5.8.1-1) ... 339s Selecting previously unselected package r-cran-jquerylib. 339s Preparing to unpack .../224-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 339s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 339s Selecting previously unselected package r-cran-memoise. 339s Preparing to unpack .../225-r-cran-memoise_2.0.1-1_all.deb ... 339s Unpacking r-cran-memoise (2.0.1-1) ... 339s Selecting previously unselected package r-cran-fs. 339s Preparing to unpack .../226-r-cran-fs_1.6.4+dfsg-1_amd64.deb ... 339s Unpacking r-cran-fs (1.6.4+dfsg-1) ... 339s Selecting previously unselected package r-cran-rappdirs. 339s Preparing to unpack .../227-r-cran-rappdirs_0.3.3-1_amd64.deb ... 339s Unpacking r-cran-rappdirs (0.3.3-1) ... 339s Selecting previously unselected package r-cran-sass. 339s Preparing to unpack .../228-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 339s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 339s Selecting previously unselected package r-cran-bslib. 339s Preparing to unpack .../229-r-cran-bslib_0.7.0+dfsg-1_all.deb ... 339s Unpacking r-cran-bslib (0.7.0+dfsg-1) ... 339s Selecting previously unselected package r-cran-ps. 339s Preparing to unpack .../230-r-cran-ps_1.8.0-1_amd64.deb ... 339s Unpacking r-cran-ps (1.8.0-1) ... 339s Selecting previously unselected package r-cran-processx. 339s Preparing to unpack .../231-r-cran-processx_3.8.4-1_amd64.deb ... 339s Unpacking r-cran-processx (3.8.4-1) ... 339s Selecting previously unselected package r-cran-callr. 339s Preparing to unpack .../232-r-cran-callr_3.7.6-1_all.deb ... 339s Unpacking r-cran-callr (3.7.6-1) ... 339s Selecting previously unselected package r-cran-class. 339s Preparing to unpack .../233-r-cran-class_7.3-23-1_amd64.deb ... 339s Unpacking r-cran-class (7.3-23-1) ... 339s Selecting previously unselected package r-cran-proxy. 339s Preparing to unpack .../234-r-cran-proxy_0.4-27-1_amd64.deb ... 339s Unpacking r-cran-proxy (0.4-27-1) ... 340s Selecting previously unselected package r-cran-e1071. 340s Preparing to unpack .../235-r-cran-e1071_1.7-16-1_amd64.deb ... 340s Unpacking r-cran-e1071 (1.7-16-1) ... 340s Selecting previously unselected package r-cran-iterators. 340s Preparing to unpack .../236-r-cran-iterators_1.0.14-1_all.deb ... 340s Unpacking r-cran-iterators (1.0.14-1) ... 340s Selecting previously unselected package r-cran-foreach. 340s Preparing to unpack .../237-r-cran-foreach_1.5.2-1_all.deb ... 340s Unpacking r-cran-foreach (1.5.2-1) ... 340s Selecting previously unselected package r-cran-data.table. 340s Preparing to unpack .../238-r-cran-data.table_1.16.4+dfsg-1_amd64.deb ... 340s Unpacking r-cran-data.table (1.16.4+dfsg-1) ... 340s Selecting previously unselected package r-cran-modelmetrics. 340s Preparing to unpack .../239-r-cran-modelmetrics_1.2.2.2-1build1_amd64.deb ... 340s Unpacking r-cran-modelmetrics (1.2.2.2-1build1) ... 340s Selecting previously unselected package r-cran-plyr. 340s Preparing to unpack .../240-r-cran-plyr_1.8.9-1_amd64.deb ... 340s Unpacking r-cran-plyr (1.8.9-1) ... 340s Selecting previously unselected package r-cran-proc. 340s Preparing to unpack .../241-r-cran-proc_1.18.5-1_amd64.deb ... 340s Unpacking r-cran-proc (1.18.5-1) ... 340s Selecting previously unselected package r-cran-generics. 340s Preparing to unpack .../242-r-cran-generics_0.1.3-1_all.deb ... 340s Unpacking r-cran-generics (0.1.3-1) ... 340s Selecting previously unselected package r-cran-tidyselect. 340s Preparing to unpack .../243-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ... 340s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 340s Selecting previously unselected package r-cran-dplyr. 340s Preparing to unpack .../244-r-cran-dplyr_1.1.4-4_amd64.deb ... 340s Unpacking r-cran-dplyr (1.1.4-4) ... 340s Selecting previously unselected package r-cran-tzdb. 340s Preparing to unpack .../245-r-cran-tzdb_0.4.0-2_amd64.deb ... 340s Unpacking r-cran-tzdb (0.4.0-2) ... 340s Selecting previously unselected package r-cran-clock. 340s Preparing to unpack .../246-r-cran-clock_0.7.1-1_amd64.deb ... 340s Unpacking r-cran-clock (0.7.1-1) ... 340s Selecting previously unselected package r-cran-gower. 340s Preparing to unpack .../247-r-cran-gower_1.0.1-1_amd64.deb ... 340s Unpacking r-cran-gower (1.0.1-1) ... 340s Selecting previously unselected package r-cran-hardhat. 340s Preparing to unpack .../248-r-cran-hardhat_1.4.0+dfsg-1_all.deb ... 340s Unpacking r-cran-hardhat (1.4.0+dfsg-1) ... 340s Selecting previously unselected package r-cran-rpart. 340s Preparing to unpack .../249-r-cran-rpart_4.1.24-1_amd64.deb ... 340s Unpacking r-cran-rpart (4.1.24-1) ... 340s Selecting previously unselected package r-cran-nnet. 340s Preparing to unpack .../250-r-cran-nnet_7.3-20-1_amd64.deb ... 340s Unpacking r-cran-nnet (7.3-20-1) ... 340s Selecting previously unselected package r-cran-shape. 340s Preparing to unpack .../251-r-cran-shape_1.4.6.1-1_all.deb ... 340s Unpacking r-cran-shape (1.4.6.1-1) ... 340s Selecting previously unselected package r-cran-diagram. 340s Preparing to unpack .../252-r-cran-diagram_1.6.5-2_all.deb ... 340s Unpacking r-cran-diagram (1.6.5-2) ... 340s Selecting previously unselected package r-cran-kernsmooth. 340s Preparing to unpack .../253-r-cran-kernsmooth_2.23-26-1_amd64.deb ... 340s Unpacking r-cran-kernsmooth (2.23-26-1) ... 340s Selecting previously unselected package r-cran-globals. 340s Preparing to unpack .../254-r-cran-globals_0.16.3-1_all.deb ... 340s Unpacking r-cran-globals (0.16.3-1) ... 340s Selecting previously unselected package r-cran-listenv. 340s Preparing to unpack .../255-r-cran-listenv_0.9.1+dfsg-1_all.deb ... 340s Unpacking r-cran-listenv (0.9.1+dfsg-1) ... 340s Selecting previously unselected package r-cran-parallelly. 341s Preparing to unpack .../256-r-cran-parallelly_1.38.0-1_amd64.deb ... 341s Unpacking r-cran-parallelly (1.38.0-1) ... 341s Selecting previously unselected package r-cran-future. 341s Preparing to unpack .../257-r-cran-future_1.34.0+dfsg-1_all.deb ... 341s Unpacking r-cran-future (1.34.0+dfsg-1) ... 341s Selecting previously unselected package r-cran-future.apply. 341s Preparing to unpack .../258-r-cran-future.apply_1.11.2+dfsg-1_all.deb ... 341s Unpacking r-cran-future.apply (1.11.2+dfsg-1) ... 341s Selecting previously unselected package r-cran-numderiv. 341s Preparing to unpack .../259-r-cran-numderiv_2016.8-1.1-3_all.deb ... 341s Unpacking r-cran-numderiv (2016.8-1.1-3) ... 341s Selecting previously unselected package r-cran-progressr. 341s Preparing to unpack .../260-r-cran-progressr_0.14.0-1_all.deb ... 341s Unpacking r-cran-progressr (0.14.0-1) ... 341s Selecting previously unselected package r-cran-squarem. 341s Preparing to unpack .../261-r-cran-squarem_2021.1-1_all.deb ... 341s Unpacking r-cran-squarem (2021.1-1) ... 341s Selecting previously unselected package r-cran-lava. 341s Preparing to unpack .../262-r-cran-lava_1.7.3+dfsg-1_all.deb ... 341s Unpacking r-cran-lava (1.7.3+dfsg-1) ... 341s Selecting previously unselected package r-cran-prodlim. 341s Preparing to unpack .../263-r-cran-prodlim_2024.06.25-1_amd64.deb ... 341s Unpacking r-cran-prodlim (2024.06.25-1) ... 341s Selecting previously unselected package r-cran-ipred. 341s Preparing to unpack .../264-r-cran-ipred_0.9-15-1_amd64.deb ... 341s Unpacking r-cran-ipred (0.9-15-1) ... 341s Selecting previously unselected package r-cran-timechange. 341s Preparing to unpack .../265-r-cran-timechange_0.3.0-1_amd64.deb ... 341s Unpacking r-cran-timechange (0.3.0-1) ... 341s Selecting previously unselected package r-cran-lubridate. 341s Preparing to unpack .../266-r-cran-lubridate_1.9.3+dfsg-1_amd64.deb ... 341s Unpacking r-cran-lubridate (1.9.3+dfsg-1) ... 341s Selecting previously unselected package r-cran-purrr. 341s Preparing to unpack .../267-r-cran-purrr_1.0.2-1_amd64.deb ... 341s Unpacking r-cran-purrr (1.0.2-1) ... 341s Selecting previously unselected package r-cran-stringi. 341s Preparing to unpack .../268-r-cran-stringi_1.8.4-1build1_amd64.deb ... 341s Unpacking r-cran-stringi (1.8.4-1build1) ... 341s Selecting previously unselected package r-cran-stringr. 341s Preparing to unpack .../269-r-cran-stringr_1.5.1-1_all.deb ... 341s Unpacking r-cran-stringr (1.5.1-1) ... 341s Selecting previously unselected package r-cran-tidyr. 341s Preparing to unpack .../270-r-cran-tidyr_1.3.1-1_amd64.deb ... 341s Unpacking r-cran-tidyr (1.3.1-1) ... 341s Selecting previously unselected package r-cran-timedate. 341s Preparing to unpack .../271-r-cran-timedate_4041.110-1_amd64.deb ... 341s Unpacking r-cran-timedate (4041.110-1) ... 341s Selecting previously unselected package r-cran-recipes. 341s Preparing to unpack .../272-r-cran-recipes_1.1.0+dfsg-1_all.deb ... 341s Unpacking r-cran-recipes (1.1.0+dfsg-1) ... 341s Selecting previously unselected package r-cran-reshape2. 341s Preparing to unpack .../273-r-cran-reshape2_1.4.4-2build1_amd64.deb ... 341s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 341s Selecting previously unselected package r-cran-caret. 341s Preparing to unpack .../274-r-cran-caret_6.0-94+dfsg-1_amd64.deb ... 341s Unpacking r-cran-caret (6.0-94+dfsg-1) ... 341s Selecting previously unselected package r-cran-catools. 341s Preparing to unpack .../275-r-cran-catools_1.18.2-1_amd64.deb ... 341s Unpacking r-cran-catools (1.18.2-1) ... 341s Selecting previously unselected package r-cran-cluster. 341s Preparing to unpack .../276-r-cran-cluster_2.1.8-1_amd64.deb ... 341s Unpacking r-cran-cluster (2.1.8-1) ... 341s Selecting previously unselected package r-cran-evaluate. 341s Preparing to unpack .../277-r-cran-evaluate_1.0.0-1_all.deb ... 341s Unpacking r-cran-evaluate (1.0.0-1) ... 341s Selecting previously unselected package r-cran-xfun. 341s Preparing to unpack .../278-r-cran-xfun_0.49+dfsg-1_amd64.deb ... 341s Unpacking r-cran-xfun (0.49+dfsg-1) ... 342s Selecting previously unselected package r-cran-highr. 342s Preparing to unpack .../279-r-cran-highr_0.11+dfsg-1_all.deb ... 342s Unpacking r-cran-highr (0.11+dfsg-1) ... 342s Selecting previously unselected package libjs-mathjax. 342s Preparing to unpack .../280-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 342s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 342s Selecting previously unselected package r-cran-knitr. 342s Preparing to unpack .../281-r-cran-knitr_1.49+dfsg-1_all.deb ... 342s Unpacking r-cran-knitr (1.49+dfsg-1) ... 342s Selecting previously unselected package r-cran-fontawesome. 342s Preparing to unpack .../282-r-cran-fontawesome_0.5.2-1_all.deb ... 342s Unpacking r-cran-fontawesome (0.5.2-1) ... 342s Selecting previously unselected package r-cran-tinytex. 342s Preparing to unpack .../283-r-cran-tinytex_0.53-1_all.deb ... 342s Unpacking r-cran-tinytex (0.53-1) ... 343s Selecting previously unselected package libjs-modernizr. 343s Preparing to unpack .../284-libjs-modernizr_3.13.0-0.1_all.deb ... 343s Unpacking libjs-modernizr (3.13.0-0.1) ... 343s Selecting previously unselected package r-cran-later. 343s Preparing to unpack .../285-r-cran-later_1.3.2+dfsg-1_amd64.deb ... 343s Unpacking r-cran-later (1.3.2+dfsg-1) ... 343s Selecting previously unselected package r-cran-promises. 343s Preparing to unpack .../286-r-cran-promises_1.3.0+dfsg-1_amd64.deb ... 343s Unpacking r-cran-promises (1.3.0+dfsg-1) ... 343s Selecting previously unselected package r-cran-httpuv. 343s Preparing to unpack .../287-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 343s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 343s Selecting previously unselected package r-cran-xtable. 343s Preparing to unpack .../288-r-cran-xtable_1%3a1.8-4-2_all.deb ... 343s Unpacking r-cran-xtable (1:1.8-4-2) ... 343s Selecting previously unselected package r-cran-sourcetools. 343s Preparing to unpack .../289-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 343s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 343s Selecting previously unselected package r-cran-commonmark. 343s Preparing to unpack .../290-r-cran-commonmark_1.9.2-2_amd64.deb ... 343s Unpacking r-cran-commonmark (1.9.2-2) ... 343s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 343s Preparing to unpack .../291-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 343s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 343s Selecting previously unselected package r-cran-shiny. 343s Preparing to unpack .../292-r-cran-shiny_1.9.1+dfsg-1_all.deb ... 343s Unpacking r-cran-shiny (1.9.1+dfsg-1) ... 343s Selecting previously unselected package r-cran-rmarkdown. 343s Preparing to unpack .../293-r-cran-rmarkdown_2.28+dfsg-1_all.deb ... 343s Unpacking r-cran-rmarkdown (2.28+dfsg-1) ... 343s Selecting previously unselected package r-cran-htmlwidgets. 343s Preparing to unpack .../294-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 343s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 343s Selecting previously unselected package r-cran-miniui. 343s Preparing to unpack .../295-r-cran-miniui_0.1.1.1-3build1_all.deb ... 343s Unpacking r-cran-miniui (0.1.1.1-3build1) ... 343s Selecting previously unselected package r-cran-shinyjs. 343s Preparing to unpack .../296-r-cran-shinyjs_2.1.0-1_all.deb ... 343s Unpacking r-cran-shinyjs (2.1.0-1) ... 343s Selecting previously unselected package r-cran-colourpicker. 343s Preparing to unpack .../297-r-cran-colourpicker_1.3.0+dfsg-1_all.deb ... 343s Unpacking r-cran-colourpicker (1.3.0+dfsg-1) ... 343s Selecting previously unselected package r-cran-conquer. 343s Preparing to unpack .../298-r-cran-conquer_1.3.3-1_amd64.deb ... 343s Unpacking r-cran-conquer (1.3.3-1) ... 343s Selecting previously unselected package r-cran-cowplot. 343s Preparing to unpack .../299-r-cran-cowplot_1.1.3+dfsg-1_all.deb ... 343s Unpacking r-cran-cowplot (1.1.3+dfsg-1) ... 343s Selecting previously unselected package r-cran-lazyeval. 343s Preparing to unpack .../300-r-cran-lazyeval_0.2.2-1build1_amd64.deb ... 343s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 343s Selecting previously unselected package r-cran-crosstalk. 343s Preparing to unpack .../301-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 343s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 343s Selecting previously unselected package r-cran-deldir. 343s Preparing to unpack .../302-r-cran-deldir_2.0-4-1build1_amd64.deb ... 343s Unpacking r-cran-deldir (2.0-4-1build1) ... 343s Selecting previously unselected package r-cran-deoptimr. 343s Preparing to unpack .../303-r-cran-deoptimr_1.1-3-1-1_all.deb ... 343s Unpacking r-cran-deoptimr (1.1-3-1-1) ... 343s Selecting previously unselected package r-cran-desc. 343s Preparing to unpack .../304-r-cran-desc_1.4.3-1_all.deb ... 343s Unpacking r-cran-desc (1.4.3-1) ... 344s Selecting previously unselected package r-cran-diffobj. 344s Preparing to unpack .../305-r-cran-diffobj_0.3.5-1_amd64.deb ... 344s Unpacking r-cran-diffobj (0.3.5-1) ... 344s Selecting previously unselected package r-cran-dotcall64. 344s Preparing to unpack .../306-r-cran-dotcall64_1.1-1-1_amd64.deb ... 344s Unpacking r-cran-dotcall64 (1.1-1-1) ... 344s Selecting previously unselected package r-cran-sitmo. 344s Preparing to unpack .../307-r-cran-sitmo_2.0.2-1_amd64.deb ... 344s Unpacking r-cran-sitmo (2.0.2-1) ... 344s Selecting previously unselected package r-cran-dqrng. 344s Preparing to unpack .../308-r-cran-dqrng_0.3.2+dfsg-1_amd64.deb ... 344s Unpacking r-cran-dqrng (0.3.2+dfsg-1) ... 344s Selecting previously unselected package r-cran-fastdummies. 344s Preparing to unpack .../309-r-cran-fastdummies_1.7.4-1_all.deb ... 344s Unpacking r-cran-fastdummies (1.7.4-1) ... 344s Selecting previously unselected package r-cran-fitdistrplus. 344s Preparing to unpack .../310-r-cran-fitdistrplus_1.2-1-1_all.deb ... 344s Unpacking r-cran-fitdistrplus (1.2-1-1) ... 344s Selecting previously unselected package r-cran-fnn. 344s Preparing to unpack .../311-r-cran-fnn_1.1.4.1-1_amd64.deb ... 344s Unpacking r-cran-fnn (1.1.4.1-1) ... 344s Selecting previously unselected package r-cran-gtools. 344s Preparing to unpack .../312-r-cran-gtools_3.9.5-1_amd64.deb ... 344s Unpacking r-cran-gtools (3.9.5-1) ... 344s Selecting previously unselected package r-cran-gdata. 344s Preparing to unpack .../313-r-cran-gdata_3.0.1-1_all.deb ... 344s Unpacking r-cran-gdata (3.0.1-1) ... 344s Selecting previously unselected package r-cran-ggrepel. 344s Preparing to unpack .../314-r-cran-ggrepel_0.9.5-2_amd64.deb ... 344s Unpacking r-cran-ggrepel (0.9.5-2) ... 344s Selecting previously unselected package r-cran-ggridges. 344s Preparing to unpack .../315-r-cran-ggridges_0.5.6-1_all.deb ... 344s Unpacking r-cran-ggridges (0.5.6-1) ... 344s Selecting previously unselected package r-cran-goftest. 344s Preparing to unpack .../316-r-cran-goftest_1.2-3-1_amd64.deb ... 344s Unpacking r-cran-goftest (1.2-3-1) ... 344s Selecting previously unselected package r-cran-gplots. 344s Preparing to unpack .../317-r-cran-gplots_3.2.0-1_all.deb ... 344s Unpacking r-cran-gplots (3.2.0-1) ... 344s Selecting previously unselected package r-cran-gridextra. 344s Preparing to unpack .../318-r-cran-gridextra_2.3-3build1_all.deb ... 344s Unpacking r-cran-gridextra (2.3-3build1) ... 344s Selecting previously unselected package r-cran-rprojroot. 344s Preparing to unpack .../319-r-cran-rprojroot_2.0.4-1_all.deb ... 344s Unpacking r-cran-rprojroot (2.0.4-1) ... 344s Selecting previously unselected package r-cran-here. 344s Preparing to unpack .../320-r-cran-here_1.0.1-2_all.deb ... 344s Unpacking r-cran-here (1.0.1-2) ... 344s Selecting previously unselected package r-cran-ica. 344s Preparing to unpack .../321-r-cran-ica_1.0-3-1_all.deb ... 344s Unpacking r-cran-ica (1.0-3-1) ... 344s Selecting previously unselected package r-cran-igraph. 344s Preparing to unpack .../322-r-cran-igraph_2.0.3-1_amd64.deb ... 344s Unpacking r-cran-igraph (2.0.3-1) ... 344s Selecting previously unselected package r-cran-irlba. 344s Preparing to unpack .../323-r-cran-irlba_2.3.5.1-4_amd64.deb ... 344s Unpacking r-cran-irlba (2.3.5.1-4) ... 344s Selecting previously unselected package r-cran-kernlab. 344s Preparing to unpack .../324-r-cran-kernlab_0.9-33-1_amd64.deb ... 344s Unpacking r-cran-kernlab (0.9-33-1) ... 344s Selecting previously unselected package r-cran-rcpptoml. 345s Preparing to unpack .../325-r-cran-rcpptoml_0.2.2+dfsg-1_amd64.deb ... 345s Unpacking r-cran-rcpptoml (0.2.2+dfsg-1) ... 345s Selecting previously unselected package r-cran-png. 345s Preparing to unpack .../326-r-cran-png_0.1-8-1build2_amd64.deb ... 345s Unpacking r-cran-png (0.1-8-1build2) ... 345s Selecting previously unselected package r-cran-reticulate. 345s Preparing to unpack .../327-r-cran-reticulate_1.39.0+dfsg-1_amd64.deb ... 345s Unpacking r-cran-reticulate (1.39.0+dfsg-1) ... 345s Selecting previously unselected package r-cran-leiden. 345s Preparing to unpack .../328-r-cran-leiden_0.4.3.1+dfsg-1_all.deb ... 345s Unpacking r-cran-leiden (0.4.3.1+dfsg-1) ... 345s Selecting previously unselected package r-cran-zoo. 345s Preparing to unpack .../329-r-cran-zoo_1.8-12-2_amd64.deb ... 345s Unpacking r-cran-zoo (1.8-12-2) ... 345s Selecting previously unselected package r-cran-lmtest. 345s Preparing to unpack .../330-r-cran-lmtest_0.9.40-1_amd64.deb ... 345s Unpacking r-cran-lmtest (0.9.40-1) ... 345s Selecting previously unselected package r-cran-mathjaxr. 345s Preparing to unpack .../331-r-cran-mathjaxr_1.6-0-1_all.deb ... 345s Unpacking r-cran-mathjaxr (1.6-0-1) ... 345s Selecting previously unselected package r-cran-matrixmodels. 345s Preparing to unpack .../332-r-cran-matrixmodels_0.5-3-1_all.deb ... 345s Unpacking r-cran-matrixmodels (0.5-3-1) ... 345s Selecting previously unselected package r-cran-rbibutils. 345s Preparing to unpack .../333-r-cran-rbibutils_2.3-1_amd64.deb ... 345s Unpacking r-cran-rbibutils (2.3-1) ... 345s Selecting previously unselected package r-cran-rdpack. 345s Preparing to unpack .../334-r-cran-rdpack_2.6.2-1_all.deb ... 345s Unpacking r-cran-rdpack (2.6.2-1) ... 345s Selecting previously unselected package r-cran-mnormt. 345s Preparing to unpack .../335-r-cran-mnormt_2.1.1-2_amd64.deb ... 345s Unpacking r-cran-mnormt (2.1.1-2) ... 345s Selecting previously unselected package r-cran-sparsem. 345s Preparing to unpack .../336-r-cran-sparsem_1.84-2-1_amd64.deb ... 345s Unpacking r-cran-sparsem (1.84-2-1) ... 345s Selecting previously unselected package r-cran-quantreg. 345s Preparing to unpack .../337-r-cran-quantreg_5.99.1-1_amd64.deb ... 345s Unpacking r-cran-quantreg (5.99.1-1) ... 345s Selecting previously unselected package r-cran-sn. 345s Preparing to unpack .../338-r-cran-sn_2.1.1-2_all.deb ... 345s Unpacking r-cran-sn (2.1.1-2) ... 345s Selecting previously unselected package r-cran-mvtnorm. 345s Preparing to unpack .../339-r-cran-mvtnorm_1.3-3-1_amd64.deb ... 345s Unpacking r-cran-mvtnorm (1.3-3-1) ... 345s Selecting previously unselected package r-cran-tfisher. 345s Preparing to unpack .../340-r-cran-tfisher_0.2.0-3_all.deb ... 345s Unpacking r-cran-tfisher (0.2.0-3) ... 345s Selecting previously unselected package r-cran-plotrix. 345s Preparing to unpack .../341-r-cran-plotrix_3.8-4-1_all.deb ... 345s Unpacking r-cran-plotrix (3.8-4-1) ... 345s Selecting previously unselected package r-cran-th.data. 345s Preparing to unpack .../342-r-cran-th.data_1.1-2-2_all.deb ... 345s Unpacking r-cran-th.data (1.1-2-2) ... 345s Selecting previously unselected package r-cran-sandwich. 345s Preparing to unpack .../343-r-cran-sandwich_3.1-1-1_all.deb ... 345s Unpacking r-cran-sandwich (3.1-1-1) ... 345s Selecting previously unselected package r-cran-multcomp. 345s Preparing to unpack .../344-r-cran-multcomp_1.4-26-2_all.deb ... 345s Unpacking r-cran-multcomp (1.4-26-2) ... 346s Selecting previously unselected package r-cran-mutoss. 346s Preparing to unpack .../345-r-cran-mutoss_0.1-13-1_all.deb ... 346s Unpacking r-cran-mutoss (0.1-13-1) ... 346s Selecting previously unselected package r-cran-robustbase. 346s Preparing to unpack .../346-r-cran-robustbase_0.99-4-1-1_amd64.deb ... 346s Unpacking r-cran-robustbase (0.99-4-1-1) ... 346s Selecting previously unselected package r-cran-qqconf. 346s Preparing to unpack .../347-r-cran-qqconf_1.3.2+dfsg-1_amd64.deb ... 346s Unpacking r-cran-qqconf (1.3.2+dfsg-1) ... 346s Selecting previously unselected package r-cran-metap. 346s Preparing to unpack .../348-r-cran-metap_1.11-1_all.deb ... 346s Unpacking r-cran-metap (1.11-1) ... 346s Selecting previously unselected package r-cran-plotly. 346s Preparing to unpack .../349-r-cran-plotly_4.10.4+dfsg-2_all.deb ... 346s Unpacking r-cran-plotly (4.10.4+dfsg-2) ... 346s Selecting previously unselected package r-cran-segmented. 346s Preparing to unpack .../350-r-cran-segmented_2.1-3-1_all.deb ... 346s Unpacking r-cran-segmented (2.1-3-1) ... 346s Selecting previously unselected package r-cran-mixtools. 346s Preparing to unpack .../351-r-cran-mixtools_2.0.0-1_amd64.deb ... 346s Unpacking r-cran-mixtools (2.0.0-1) ... 346s Selecting previously unselected package r-cran-patchwork. 346s Preparing to unpack .../352-r-cran-patchwork_1.3.0-1_all.deb ... 346s Unpacking r-cran-patchwork (1.3.0-1) ... 346s Selecting previously unselected package r-cran-pbapply. 346s Preparing to unpack .../353-r-cran-pbapply_1.7-2-1_all.deb ... 346s Unpacking r-cran-pbapply (1.7-2-1) ... 346s Selecting previously unselected package r-cran-pkgbuild. 346s Preparing to unpack .../354-r-cran-pkgbuild_1.4.4-1_all.deb ... 346s Unpacking r-cran-pkgbuild (1.4.4-1) ... 346s Selecting previously unselected package r-cran-pkgload. 346s Preparing to unpack .../355-r-cran-pkgload_1.4.0-1_all.deb ... 346s Unpacking r-cran-pkgload (1.4.0-1) ... 346s Selecting previously unselected package r-cran-polyclip. 346s Preparing to unpack .../356-r-cran-polyclip_1.10-7-1_amd64.deb ... 346s Unpacking r-cran-polyclip (1.10-7-1) ... 346s Selecting previously unselected package r-cran-praise. 346s Preparing to unpack .../357-r-cran-praise_1.0.0-4build1_all.deb ... 346s Unpacking r-cran-praise (1.0.0-4build1) ... 346s Selecting previously unselected package r-cran-r.methodss3. 346s Preparing to unpack .../358-r-cran-r.methodss3_1.8.2-1_all.deb ... 346s Unpacking r-cran-r.methodss3 (1.8.2-1) ... 346s Selecting previously unselected package r-cran-r.oo. 346s Preparing to unpack .../359-r-cran-r.oo_1.26.0-1_all.deb ... 346s Unpacking r-cran-r.oo (1.26.0-1) ... 346s Selecting previously unselected package r-cran-r.utils. 347s Preparing to unpack .../360-r-cran-r.utils_2.12.3-1_all.deb ... 347s Unpacking r-cran-r.utils (2.12.3-1) ... 347s Selecting previously unselected package r-cran-rann. 347s Preparing to unpack .../361-r-cran-rann_2.6.2-1_amd64.deb ... 347s Unpacking r-cran-rann (2.6.2-1) ... 347s Selecting previously unselected package r-cran-rcppannoy. 347s Preparing to unpack .../362-r-cran-rcppannoy_0.0.22-1_amd64.deb ... 347s Unpacking r-cran-rcppannoy (0.0.22-1) ... 347s Selecting previously unselected package r-cran-rcppeigen. 347s Preparing to unpack .../363-r-cran-rcppeigen_0.3.4.0.2-1_amd64.deb ... 347s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 347s Selecting previously unselected package r-cran-rcpphnsw. 347s Preparing to unpack .../364-r-cran-rcpphnsw_0.5.0+ds-1_amd64.deb ... 347s Unpacking r-cran-rcpphnsw (0.5.0+ds-1) ... 347s Selecting previously unselected package r-cran-rcppprogress. 347s Preparing to unpack .../365-r-cran-rcppprogress_0.4.2-2build1_all.deb ... 347s Unpacking r-cran-rcppprogress (0.4.2-2build1) ... 347s Selecting previously unselected package r-cran-rocr. 347s Preparing to unpack .../366-r-cran-rocr_1.0-11-3_all.deb ... 347s Unpacking r-cran-rocr (1.0-11-3) ... 347s Selecting previously unselected package r-cran-rspectra. 347s Preparing to unpack .../367-r-cran-rspectra_0.16-2-1_amd64.deb ... 347s Unpacking r-cran-rspectra (0.16-2-1) ... 347s Selecting previously unselected package r-cran-rsvd. 347s Preparing to unpack .../368-r-cran-rsvd_1.0.5-1_all.deb ... 347s Unpacking r-cran-rsvd (1.0.5-1) ... 347s Selecting previously unselected package r-cran-rtsne. 347s Preparing to unpack .../369-r-cran-rtsne_0.17-1_amd64.deb ... 347s Unpacking r-cran-rtsne (0.17-1) ... 347s Selecting previously unselected package r-cran-scattermore. 347s Preparing to unpack .../370-r-cran-scattermore_1.2-1_amd64.deb ... 347s Unpacking r-cran-scattermore (1.2-1) ... 347s Selecting previously unselected package r-cran-sctransform. 347s Preparing to unpack .../371-r-cran-sctransform_0.4.1-1_amd64.deb ... 347s Unpacking r-cran-sctransform (0.4.1-1) ... 347s Selecting previously unselected package r-cran-sp. 347s Preparing to unpack .../372-r-cran-sp_1%3a2.1-4+dfsg-1_amd64.deb ... 347s Unpacking r-cran-sp (1:2.1-4+dfsg-1) ... 347s Selecting previously unselected package r-cran-spam. 347s Preparing to unpack .../373-r-cran-spam_2.11-0-1_amd64.deb ... 347s Unpacking r-cran-spam (2.11-0-1) ... 347s Selecting previously unselected package r-cran-seuratobject. 347s Preparing to unpack .../374-r-cran-seuratobject_5.0.2-1_amd64.deb ... 347s Unpacking r-cran-seuratobject (5.0.2-1) ... 347s Selecting previously unselected package r-cran-spatstat.utils. 347s Preparing to unpack .../375-r-cran-spatstat.utils_3.1-0-1_amd64.deb ... 347s Unpacking r-cran-spatstat.utils (3.1-0-1) ... 347s Selecting previously unselected package r-cran-spatstat.data. 347s Preparing to unpack .../376-r-cran-spatstat.data_3.1-2-1_all.deb ... 347s Unpacking r-cran-spatstat.data (3.1-2-1) ... 347s Selecting previously unselected package r-cran-spatstat.geom. 347s Preparing to unpack .../377-r-cran-spatstat.geom_3.2-9-2_amd64.deb ... 347s Unpacking r-cran-spatstat.geom (3.2-9-2) ... 348s Selecting previously unselected package r-cran-spatstat.random. 348s Preparing to unpack .../378-r-cran-spatstat.random_3.2-3-1_amd64.deb ... 348s Unpacking r-cran-spatstat.random (3.2-3-1) ... 348s Selecting previously unselected package r-cran-tensor. 348s Preparing to unpack .../379-r-cran-tensor_1.5-4_all.deb ... 348s Unpacking r-cran-tensor (1.5-4) ... 348s Selecting previously unselected package r-cran-spatstat.sparse. 348s Preparing to unpack .../380-r-cran-spatstat.sparse_3.0-3-1_amd64.deb ... 348s Unpacking r-cran-spatstat.sparse (3.0-3-1) ... 348s Selecting previously unselected package r-cran-spatstat.explore. 348s Preparing to unpack .../381-r-cran-spatstat.explore_3.2-7-1_amd64.deb ... 348s Unpacking r-cran-spatstat.explore (3.2-7-1) ... 348s Selecting previously unselected package r-cran-uwot. 348s Preparing to unpack .../382-r-cran-uwot_0.2.2-1_amd64.deb ... 348s Unpacking r-cran-uwot (0.2.2-1) ... 348s Selecting previously unselected package r-cran-seurat. 348s Preparing to unpack .../383-r-cran-seurat_5.1.0-1_amd64.deb ... 348s Unpacking r-cran-seurat (5.1.0-1) ... 348s Selecting previously unselected package r-cran-waldo. 348s Preparing to unpack .../384-r-cran-waldo_0.6.1-1_all.deb ... 348s Unpacking r-cran-waldo (0.6.1-1) ... 348s Selecting previously unselected package r-cran-testthat. 348s Preparing to unpack .../385-r-cran-testthat_3.2.1.1-1_amd64.deb ... 348s Unpacking r-cran-testthat (3.2.1.1-1) ... 348s Selecting previously unselected package r-cran-vgam. 348s Preparing to unpack .../386-r-cran-vgam_1.1-11-1_amd64.deb ... 348s Unpacking r-cran-vgam (1.1-11-1) ... 348s Setting up libjs-json (0~20221030+~1.0.8-1) ... 348s Setting up javascript-common (11+nmu1) ... 348s Setting up libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 348s Setting up libpixman-1-0:amd64 (0.44.0-3) ... 348s Setting up libsharpyuv0:amd64 (1.5.0-0.1) ... 348s Setting up libncurses-dev:amd64 (6.5-2) ... 348s Setting up 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(1.2.2.2-1build1) ... 351s Setting up r-cran-callr (3.7.6-1) ... 351s Setting up r-cran-matrixmodels (0.5-3-1) ... 351s Setting up r-bioc-rhtslib (3.2.0+dfsg-2) ... 351s Setting up r-cran-desc (1.4.3-1) ... 351s Setting up r-cran-munsell (0.5.1-1) ... 351s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 351s Setting up r-cran-clock (0.7.1-1) ... 351s Setting up r-cran-sandwich (3.1-1-1) ... 351s Setting up r-cran-proc (1.18.5-1) ... 351s Setting up r-cran-fontawesome (0.5.2-1) ... 351s Setting up r-cran-survival (3.8-3-1) ... 351s Setting up r-cran-igraph (2.0.3-1) ... 351s Setting up r-bioc-biocio (1.16.0+dfsg-2) ... 351s Setting up r-cran-r.oo (1.26.0-1) ... 351s Setting up r-cran-rdpack (2.6.2-1) ... 351s Setting up r-cran-future (1.34.0+dfsg-1) ... 351s Setting up gfortran (4:14.1.0-2ubuntu1) ... 351s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 351s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 351s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 351s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 351s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 351s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... 351s Setting up r-cran-reshape2 (1.4.4-2build1) ... 351s Setting up r-cran-rsvd (1.0.5-1) ... 351s Setting up r-cran-future.apply (1.11.2+dfsg-1) ... 351s Setting up r-cran-timechange (0.3.0-1) ... 351s Setting up r-cran-th.data (1.1-2-2) ... 351s Setting up r-cran-httr (1.4.7+dfsg-1) ... 351s Setting up r-cran-gridextra (2.3-3build1) ... 351s Setting up r-cran-scales (1.3.0-1) ... 351s Setting up r-cran-memoise (2.0.1-1) ... 351s Setting up r-cran-lava (1.7.3+dfsg-1) ... 351s Setting up r-cran-promises (1.3.0+dfsg-1) ... 351s Setting up r-cran-purrr (1.0.2-1) ... 351s Setting up r-cran-e1071 (1.7-16-1) ... 351s Setting up r-cran-spatstat.data (3.1-2-1) ... 351s Setting up r-cran-fastdummies (1.7.4-1) ... 351s Setting up r-cran-multcomp (1.4-26-2) ... 351s Setting up r-cran-qqconf (1.3.2+dfsg-1) ... 351s Setting up r-cran-seuratobject (5.0.2-1) ... 351s Setting up r-cran-spatstat.geom (3.2-9-2) ... 351s Setting up r-bioc-xvector (0.46.0-2) ... 351s Setting up r-cran-pkgbuild (1.4.4-1) ... 351s Setting up r-cran-hardhat (1.4.0+dfsg-1) ... 351s Setting up r-cran-dplyr (1.1.4-4) ... 351s Setting up r-cran-rspectra (0.16-2-1) ... 351s Setting up r-cran-gplots (3.2.0-1) ... 351s Setting up r-cran-uwot (0.2.2-1) ... 351s Setting up r-cran-leiden (0.4.3.1+dfsg-1) ... 351s Setting up r-bioc-multtest (2.62.0-2) ... 351s Setting up r-cran-lubridate (1.9.3+dfsg-1) ... 351s Setting up r-cran-pkgload (1.4.0-1) ... 351s Setting up r-cran-r.utils (2.12.3-1) ... 351s Setting up r-cran-rocr (1.0-11-3) ... 351s Setting up r-base-dev (4.4.2-1build1) ... 351s Setting up r-cran-prodlim (2024.06.25-1) ... 351s Setting up r-cran-fitdistrplus (1.2-1-1) ... 351s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 351s Setting up r-bioc-sparsearray (1.6.0+dfsg-2) ... 351s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 351s Setting up r-cran-scattermore (1.2-1) ... 351s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 351s Setting up r-cran-rpart (4.1.24-1) ... 351s Setting up r-cran-spatstat.random (3.2-3-1) ... 351s Setting up r-cran-ipred (0.9-15-1) ... 351s Setting up r-cran-testthat (3.2.1.1-1) ... 351s Setting up r-bioc-genomeinfodb (1.42.1+dfsg-2) ... 351s Setting up r-cran-bslib (0.7.0+dfsg-1) ... 351s Setting up r-cran-spatstat.explore (3.2-7-1) ... 351s Setting up r-cran-ggrepel (0.9.5-2) ... 351s Setting up r-cran-tidyr (1.3.1-1) ... 351s Setting up r-cran-recipes (1.1.0+dfsg-1) ... 351s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 351s Setting up r-cran-mutoss (0.1-13-1) ... 351s Setting up r-cran-ggridges (0.5.6-1) ... 351s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 351s Setting up r-cran-cowplot (1.1.3+dfsg-1) ... 351s Setting up r-cran-sctransform (0.4.1-1) ... 351s Setting up r-cran-patchwork (1.3.0-1) ... 351s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 351s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 351s Setting up r-cran-caret (6.0-94+dfsg-1) ... 351s Setting up r-cran-shiny (1.9.1+dfsg-1) ... 351s Setting up r-cran-shinyjs (2.1.0-1) ... 351s Setting up r-cran-miniui (0.1.1.1-3build1) ... 351s Setting up r-cran-rmarkdown (2.28+dfsg-1) ... 351s Setting up r-cran-conquer (1.3.3-1) ... 351s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... 351s Setting up r-cran-crosstalk (1.2.1+dfsg-1) ... 351s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 351s Setting up r-cran-quantreg (5.99.1-1) ... 351s Setting up r-cran-sn (2.1.1-2) ... 351s Setting up r-bioc-deseq2 (1.46.0+dfsg-2) ... 351s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 351s Setting up r-cran-colourpicker (1.3.0+dfsg-1) ... 351s Setting up r-cran-tfisher (0.2.0-3) ... 352s Setting up r-bioc-genomicalignments (1.42.0-2) ... 352s Setting up r-cran-metap (1.11-1) ... 352s Setting up r-bioc-rtracklayer (1.66.0-2) ... 352s Setting up r-cran-plotly (4.10.4+dfsg-2) ... 352s Setting up r-cran-mixtools (2.0.0-1) ... 352s Setting up r-cran-seurat (5.1.0-1) ... 352s Processing triggers for man-db (2.13.0-1) ... 353s Processing triggers for install-info (7.1.1-1) ... 353s Processing triggers for libc-bin (2.40-4ubuntu1) ... 356s autopkgtest [15:36:35]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 356s autopkgtest [15:36:35]: test pkg-r-autopkgtest: [----------------------- 357s Test: Try to load the R library Seurat 357s 357s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 357s Copyright (C) 2024 The R Foundation for Statistical Computing 357s Platform: x86_64-pc-linux-gnu 357s 357s R is free software and comes with ABSOLUTELY NO WARRANTY. 357s You are welcome to redistribute it under certain conditions. 357s Type 'license()' or 'licence()' for distribution details. 357s 357s R is a collaborative project with many contributors. 357s Type 'contributors()' for more information and 357s 'citation()' on how to cite R or R packages in publications. 357s 357s Type 'demo()' for some demos, 'help()' for on-line help, or 357s 'help.start()' for an HTML browser interface to help. 357s Type 'q()' to quit R. 357s 357s > library('Seurat') 357s Loading required package: SeuratObject 357s Loading required package: sp 358s ‘SeuratObject’ was built under R 4.4.1 but the current version is 358s 4.4.2; it is recomended that you reinstall ‘SeuratObject’ as the ABI 358s for R may have changed 358s ‘SeuratObject’ was built with package ‘Matrix’ 1.7.0 but the current 358s version is 1.7.1; it is recomended that you reinstall ‘SeuratObject’ as 358s the ABI for ‘Matrix’ may have changed 358s 358s Attaching package: ‘SeuratObject’ 358s 358s The following objects are masked from ‘package:base’: 358s 358s intersect, t 358s 360s > 360s > 360s Other tests are currently unsupported! 360s They will be progressively added. 360s autopkgtest [15:36:39]: test pkg-r-autopkgtest: -----------------------] 361s autopkgtest [15:36:40]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 361s pkg-r-autopkgtest PASS 361s autopkgtest [15:36:40]: @@@@@@@@@@@@@@@@@@@@ summary 361s run-unit-test PASS 361s pkg-r-autopkgtest PASS 468s nova [W] Skipping flock for amd64 468s Creating nova instance adt-plucky-amd64-r-cran-seurat-20250117-153039-juju-7f2275-prod-proposed-migration-environment-15-cada56ed-0770-4e78-a123-8333d2d60c87 from image adt/ubuntu-plucky-amd64-server-20250117.img (UUID 8f35863a-398a-4b7d-9594-544c7b7656c3)... 468s nova [W] Timed out waiting for c05056e3-3559-4fbf-8ca2-b166c9d0a98d to get deleted. 468s nova [W] Skipping flock for amd64 468s Creating nova instance adt-plucky-amd64-r-cran-seurat-20250117-153039-juju-7f2275-prod-proposed-migration-environment-15-cada56ed-0770-4e78-a123-8333d2d60c87 from image adt/ubuntu-plucky-amd64-server-20250117.img (UUID 8f35863a-398a-4b7d-9594-544c7b7656c3)... 468s nova [W] Timed out waiting for 855ac910-f994-4565-b10d-d0db17d7233f to get deleted.