0s autopkgtest [15:19:25]: starting date and time: 2025-01-17 15:19:25+0000 0s autopkgtest [15:19:25]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [15:19:25]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.t1fkzwjw/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-bioc-genomeinfodb,src:r-bioc-biocgenerics,src:r-cran-seurat --apt-upgrade r-cran-seurat --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-bioc-genomeinfodb/1.42.1+dfsg-2 r-bioc-biocgenerics/0.52.0-2 r-cran-seurat/5.1.0-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-2.secgroup --name adt-plucky-amd64-r-cran-seurat-20250117-151924-juju-7f2275-prod-proposed-migration-environment-20-fc2ca2be-58be-4e13-9bce-5bd026845870 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 180s autopkgtest [15:22:25]: testbed dpkg architecture: amd64 180s autopkgtest [15:22:25]: testbed apt version: 2.9.18 181s autopkgtest [15:22:26]: @@@@@@@@@@@@@@@@@@@@ test bed setup 181s autopkgtest [15:22:26]: testbed release detected to be: None 182s autopkgtest [15:22:27]: updating testbed package index (apt update) 182s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 182s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 182s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 182s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 182s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [178 kB] 183s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [868 kB] 183s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.1 kB] 183s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 183s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [228 kB] 183s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [331 kB] 183s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted i386 Packages [2408 B] 183s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [40.1 kB] 183s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [1095 kB] 183s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [468 kB] 183s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [4444 B] 183s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [24.9 kB] 183s Fetched 3337 kB in 1s (3358 kB/s) 184s Reading package lists... 184s Reading package lists... 185s Building dependency tree... 185s Reading state information... 185s Calculating upgrade... 185s The following packages will be upgraded: 185s libgudev-1.0-0 usb.ids 185s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 185s Need to get 239 kB of archives. 185s After this operation, 0 B of additional disk space will be used. 185s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 usb.ids all 2025.01.14-1 [223 kB] 185s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libgudev-1.0-0 amd64 1:238-6 [15.8 kB] 186s Fetched 239 kB in 0s (482 kB/s) 186s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75824 files and directories currently installed.) 186s Preparing to unpack .../usb.ids_2025.01.14-1_all.deb ... 186s Unpacking usb.ids (2025.01.14-1) over (2024.12.04-1) ... 186s Preparing to unpack .../libgudev-1.0-0_1%3a238-6_amd64.deb ... 186s Unpacking libgudev-1.0-0:amd64 (1:238-6) over (1:238-5ubuntu1) ... 186s Setting up usb.ids (2025.01.14-1) ... 186s Setting up libgudev-1.0-0:amd64 (1:238-6) ... 186s Processing triggers for libc-bin (2.40-4ubuntu1) ... 186s Reading package lists... 186s Building dependency tree... 186s Reading state information... 187s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 187s autopkgtest [15:22:32]: upgrading testbed (apt dist-upgrade and autopurge) 187s Reading package lists... 187s Building dependency tree... 187s Reading state information... 187s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 187s Starting 2 pkgProblemResolver with broken count: 0 187s Done 188s Entering ResolveByKeep 188s 188s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 188s Reading package lists... 189s Building dependency tree... 189s Reading state information... 189s Starting pkgProblemResolver with broken count: 0 189s Starting 2 pkgProblemResolver with broken count: 0 189s Done 189s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 192s autopkgtest [15:22:37]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 13:41:20 UTC 2024 192s autopkgtest [15:22:37]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-seurat 194s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-seurat 5.1.0-1 (dsc) [3385 B] 194s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-seurat 5.1.0-1 (tar) [2064 kB] 194s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-seurat 5.1.0-1 (diff) [4724 B] 194s gpgv: Signature made Tue Sep 10 23:46:06 2024 UTC 194s gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 194s gpgv: issuer "plessy@debian.org" 194s gpgv: Can't check signature: No public key 194s dpkg-source: warning: cannot verify inline signature for ./r-cran-seurat_5.1.0-1.dsc: no acceptable signature found 194s autopkgtest [15:22:39]: testing package r-cran-seurat version 5.1.0-1 194s autopkgtest [15:22:39]: build not needed 196s autopkgtest [15:22:41]: test run-unit-test: preparing testbed 196s Reading package lists... 197s Building dependency tree... 197s Reading state information... 197s Starting pkgProblemResolver with broken count: 13 197s Starting 2 pkgProblemResolver with broken count: 13 197s Investigating (0) r-bioc-s4vectors:amd64 < none -> 0.42.1+dfsg-2 @un puN Ib > 197s Broken r-bioc-s4vectors:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 197s Considering r-bioc-biocgenerics:amd64 55 as a solution to r-bioc-s4vectors:amd64 35 197s Re-Instated r-bioc-biocgenerics:amd64 197s Investigating (0) r-bioc-iranges:amd64 < none -> 2.38.1-1 @un puN Ib > 197s Broken r-bioc-iranges:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 197s Considering r-bioc-biocgenerics:amd64 35 as a solution to r-bioc-iranges:amd64 24 197s Investigating (0) r-bioc-genomicranges:amd64 < none -> 1.56.2+dfsg-1 @un puN Ib > 197s Broken r-bioc-genomicranges:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 197s Considering r-bioc-biocgenerics:amd64 35 as a solution to r-bioc-genomicranges:amd64 11 197s Broken r-bioc-genomicranges:amd64 Depends on r-bioc-xvector:amd64 < none | 0.44.0-1 @un uH > (>= 0.29.2) 197s Considering r-bioc-xvector:amd64 0 as a solution to r-bioc-genomicranges:amd64 11 197s Reinst Failed because of protected r-bioc-biocgenerics:amd64 197s Considering r-bioc-xvector:amd64 0 as a solution to r-bioc-genomicranges:amd64 11 197s Investigating (0) r-bioc-biobase:amd64 < none -> 2.64.0-4 @un puN Ib > 197s Broken r-bioc-biobase:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 197s Considering r-bioc-biocgenerics:amd64 35 as a solution to r-bioc-biobase:amd64 10 197s Investigating (0) r-bioc-delayedarray:amd64 < none -> 0.30.1+dfsg-1 @un puN Ib > 197s Broken r-bioc-delayedarray:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 197s Considering r-bioc-biocgenerics:amd64 35 as a solution to r-bioc-delayedarray:amd64 7 197s Broken r-bioc-delayedarray:amd64 Depends on r-bioc-matrixgenerics:amd64 < none | 1.16.0-2 @un uH > (>= 1.16.0) 197s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-delayedarray:amd64 7 197s Reinst Failed because of protected r-bioc-biocgenerics:amd64 197s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-delayedarray:amd64 7 197s Broken r-bioc-delayedarray:amd64 Depends on r-bioc-s4arrays:amd64 < none | 1.4.1+dfsg-1 @un uH > (>= 1.4.1) 197s Considering r-bioc-s4arrays:amd64 0 as a solution to r-bioc-delayedarray:amd64 7 197s Reinst Failed because of protected r-bioc-biocgenerics:amd64 197s Considering r-bioc-s4arrays:amd64 0 as a solution to r-bioc-delayedarray:amd64 7 197s Broken r-bioc-delayedarray:amd64 Depends on r-bioc-sparsearray:amd64 < none | 1.4.8+dfsg-1 @un uH > (>= 1.4.8) 197s Considering r-bioc-sparsearray:amd64 0 as a solution to r-bioc-delayedarray:amd64 7 197s Reinst Failed because of protected r-bioc-biocgenerics:amd64 197s Considering r-bioc-sparsearray:amd64 0 as a solution to r-bioc-delayedarray:amd64 7 197s Investigating (0) r-bioc-summarizedexperiment:amd64 < none -> 1.34.0+dfsg-1 @un puN Ib > 197s Broken r-bioc-summarizedexperiment:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 197s Considering r-bioc-biocgenerics:amd64 35 as a solution to r-bioc-summarizedexperiment:amd64 5 197s Broken r-bioc-summarizedexperiment:amd64 Depends on r-bioc-matrixgenerics:amd64 < none | 1.16.0-2 @un uH > (>= 1.16.0) 197s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-summarizedexperiment:amd64 5 197s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-summarizedexperiment:amd64 5 197s Broken r-bioc-summarizedexperiment:amd64 Depends on r-bioc-s4arrays:amd64 < none | 1.4.1+dfsg-1 @un uH > (>= 1.4.1) 197s Considering r-bioc-s4arrays:amd64 0 as a solution to r-bioc-summarizedexperiment:amd64 5 197s Considering r-bioc-s4arrays:amd64 0 as a solution to r-bioc-summarizedexperiment:amd64 5 197s Investigating (0) r-bioc-ucsc.utils:amd64 < none -> 1.0.0+ds-2 @un puN Ib > 197s Broken r-bioc-ucsc.utils:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 197s Considering r-bioc-biocgenerics:amd64 35 as a solution to r-bioc-ucsc.utils:amd64 4 197s Investigating (0) r-bioc-limma:amd64 < none -> 3.60.6+dfsg-1 @un puN Ib > 197s Broken r-bioc-limma:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 197s Considering r-bioc-biocgenerics:amd64 35 as a solution to r-bioc-limma:amd64 3 197s Broken r-bioc-limma:amd64 Depends on r-cran-statmod:amd64 < none | 1.5.0-1 @un uH > 197s Considering r-cran-statmod:amd64 1 as a solution to r-bioc-limma:amd64 3 197s Re-Instated r-cran-statmod:amd64 197s Investigating (0) r-bioc-rtracklayer:amd64 < none -> 1.64.0-1 @un puN Ib > 197s Broken r-bioc-rtracklayer:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 197s Considering r-bioc-biocgenerics:amd64 35 as a solution to r-bioc-rtracklayer:amd64 1 197s Broken r-bioc-rtracklayer:amd64 Depends on r-cran-xml:amd64 < none | 3.99-0.18-1 @un uH > (>= 1.98-0) 197s Considering r-cran-xml:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 197s Re-Instated r-cran-xml:amd64 197s Broken r-bioc-rtracklayer:amd64 Depends on r-bioc-xvector:amd64 < none | 0.44.0-1 @un uH > (>= 0.44.0) 197s Considering r-bioc-xvector:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 197s Considering r-bioc-xvector:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 197s Broken r-bioc-rtracklayer:amd64 Depends on r-bioc-biostrings:amd64 < none | 2.72.1+dfsg-1 @un uH > (>= 2.72.1) 197s Considering r-bioc-biostrings:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 197s Reinst Failed because of protected r-bioc-biocgenerics:amd64 197s Considering r-bioc-biostrings:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 197s Broken r-bioc-rtracklayer:amd64 Depends on r-bioc-zlibbioc:amd64 < none | 1.50.0+dfsg-2 @un uH > (>= 1.50.0) 197s Considering r-bioc-zlibbioc:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 197s Reinst Failed because of protected r-bioc-biocgenerics:amd64 197s Considering r-bioc-zlibbioc:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 197s Broken r-bioc-rtracklayer:amd64 Depends on r-bioc-rsamtools:amd64 < none | 2.20.0+dfsg-1 @un uH > (>= 2.20.0) 197s Considering r-bioc-rsamtools:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 197s Reinst Failed because of protected r-bioc-biocgenerics:amd64 197s Considering r-bioc-rsamtools:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 197s Broken r-bioc-rtracklayer:amd64 Depends on r-bioc-genomicalignments:amd64 < none | 1.40.0-1 @un uH > (>= 1.40.0) 197s Considering r-bioc-genomicalignments:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 197s Reinst Failed because of protected r-bioc-biocgenerics:amd64 197s Considering r-bioc-genomicalignments:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 197s Broken r-bioc-rtracklayer:amd64 Depends on r-bioc-biocio:amd64 < none | 1.14.0+dfsg-1 @un uH > (>= 1.14.0) 197s Considering r-bioc-biocio:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 197s Reinst Failed because of protected r-bioc-biocgenerics:amd64 197s Considering r-bioc-biocio:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 197s Broken r-bioc-rtracklayer:amd64 Depends on r-cran-restfulr:amd64 < none | 0.0.15-1 @un uH > (>= 0.0.13) 197s Considering r-cran-restfulr:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 197s Re-Instated r-cran-rcurl:amd64 197s Re-Instated r-cran-rjson:amd64 197s Re-Instated r-cran-restfulr:amd64 197s Investigating (0) r-bioc-deseq2:amd64 < none -> 1.44.0+dfsg-1 @un puN Ib > 197s Broken r-bioc-deseq2:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 197s Considering r-bioc-biocgenerics:amd64 35 as a solution to r-bioc-deseq2:amd64 1 197s Broken r-bioc-deseq2:amd64 Depends on r-bioc-biocparallel:amd64 < none | 1.38.0-2 @un uH > (>= 1.38.0) 197s Considering r-bioc-biocparallel:amd64 0 as a solution to r-bioc-deseq2:amd64 1 197s Reinst Failed because of protected r-bioc-biocgenerics:amd64 197s Considering r-bioc-biocparallel:amd64 0 as a solution to r-bioc-deseq2:amd64 1 197s Broken r-bioc-deseq2:amd64 Depends on r-cran-locfit:amd64 < none | 1.5-9.10-1 @un uH > 197s Considering r-cran-locfit:amd64 2 as a solution to r-bioc-deseq2:amd64 1 197s Re-Instated r-cran-locfit:amd64 197s Broken r-bioc-deseq2:amd64 Depends on r-bioc-matrixgenerics:amd64 < none | 1.16.0-2 @un uH > (>= 1.16.0) 197s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-deseq2:amd64 1 197s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-deseq2:amd64 1 197s Investigating (0) r-bioc-singlecellexperiment:amd64 < none -> 1.26.0+ds-1 @un puN Ib > 197s Broken r-bioc-singlecellexperiment:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 197s Considering r-bioc-biocgenerics:amd64 35 as a solution to r-bioc-singlecellexperiment:amd64 1 197s Investigating (0) r-bioc-monocle:amd64 < none -> 2.32.0-1 @un puN Ib > 197s Broken r-bioc-monocle:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 197s Considering r-bioc-biocgenerics:amd64 35 as a solution to r-bioc-monocle:amd64 1 197s Broken r-bioc-monocle:amd64 Depends on r-cran-ddrtree:amd64 < none | 0.1.5-2 @un uH > (>= 0.1.4) 197s Considering r-cran-ddrtree:amd64 0 as a solution to r-bioc-monocle:amd64 1 197s Re-Instated r-cran-ddrtree:amd64 197s Broken r-bioc-monocle:amd64 Depends on r-bioc-hsmmsinglecell:amd64 < none | 1.24.0-1 @un uH > (>= 0.101.5) 197s Considering r-bioc-hsmmsinglecell:amd64 0 as a solution to r-bioc-monocle:amd64 1 197s Reinst Failed because of protected r-bioc-biocgenerics:amd64 197s Considering r-bioc-hsmmsinglecell:amd64 0 as a solution to r-bioc-monocle:amd64 1 197s Broken r-bioc-monocle:amd64 Depends on r-cran-combinat:amd64 < none | 0.0-8-7build1 @un uH > 197s Considering r-cran-combinat:amd64 1 as a solution to r-bioc-monocle:amd64 1 197s Re-Instated r-cran-combinat:amd64 197s Broken r-bioc-monocle:amd64 Depends on r-cran-fastica:amd64 < none | 1.2-7-1 @un uH > 197s Considering r-cran-fastica:amd64 3 as a solution to r-bioc-monocle:amd64 1 197s Re-Instated r-cran-fastica:amd64 197s Broken r-bioc-monocle:amd64 Depends on r-cran-leidenbase:amd64 < none | 0.1.27-1 @un uH > (>= 0.1.9) 197s Considering r-cran-leidenbase:amd64 0 as a solution to r-bioc-monocle:amd64 1 197s Re-Instated r-cran-leidenbase:amd64 197s Broken r-bioc-monocle:amd64 Depends on r-cran-pheatmap:amd64 < none | 1.0.12-2build1 @un uH > 197s Considering r-cran-pheatmap:amd64 1 as a solution to r-bioc-monocle:amd64 1 197s Re-Instated r-cran-pheatmap:amd64 197s Broken r-bioc-monocle:amd64 Depends on r-cran-slam:amd64 < none | 0.1-55-1 @un uH > 197s Considering r-cran-slam:amd64 1 as a solution to r-bioc-monocle:amd64 1 197s Re-Instated r-cran-slam:amd64 197s Broken r-bioc-monocle:amd64 Depends on r-cran-viridis:amd64 < none | 0.6.5-1 @un uH > 197s Considering r-cran-viridis:amd64 2 as a solution to r-bioc-monocle:amd64 1 197s Re-Instated r-cran-viridis:amd64 197s Broken r-bioc-monocle:amd64 Depends on r-bioc-biocviews:amd64 < none | 1.72.0-1 @un uH > 197s Considering r-bioc-biocviews:amd64 1 as a solution to r-bioc-monocle:amd64 1 197s Reinst Failed because of protected r-bioc-biocgenerics:amd64 197s Considering r-bioc-biocviews:amd64 1 as a solution to r-bioc-monocle:amd64 1 197s Investigating (0) r-bioc-multtest:amd64 < none -> 2.60.0-1 @un puN Ib > 197s Broken r-bioc-multtest:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 197s Considering r-bioc-biocgenerics:amd64 35 as a solution to r-bioc-multtest:amd64 0 197s Done 197s Some packages could not be installed. This may mean that you have 197s requested an impossible situation or if you are using the unstable 197s distribution that some required packages have not yet been created 197s or been moved out of Incoming. 197s The following information may help to resolve the situation: 197s 197s The following packages have unmet dependencies: 197s r-bioc-biobase : Depends: r-api-bioc-3.19 197s r-bioc-delayedarray : Depends: r-api-bioc-3.19 197s Depends: r-bioc-matrixgenerics (>= 1.16.0) but it is not going to be installed 197s Depends: r-bioc-s4arrays (>= 1.4.1) but it is not going to be installed 197s Depends: r-bioc-sparsearray (>= 1.4.8) but it is not going to be installed 197s r-bioc-deseq2 : Depends: r-api-bioc-3.19 197s Depends: r-bioc-biocparallel (>= 1.38.0) but it is not going to be installed 197s Depends: r-bioc-matrixgenerics (>= 1.16.0) but it is not going to be installed 197s r-bioc-genomicranges : Depends: r-api-bioc-3.19 197s Depends: r-bioc-xvector (>= 0.29.2) but it is not going to be installed 197s r-bioc-iranges : Depends: r-api-bioc-3.19 197s r-bioc-limma : Depends: r-api-bioc-3.19 197s r-bioc-monocle : Depends: r-api-bioc-3.19 197s Depends: r-bioc-hsmmsinglecell (>= 0.101.5) but it is not going to be installed 197s Depends: r-bioc-biocviews but it is not going to be installed 197s r-bioc-multtest : Depends: r-api-bioc-3.19 197s r-bioc-rtracklayer : Depends: r-api-bioc-3.19 197s Depends: r-bioc-xvector (>= 0.44.0) but it is not going to be installed 197s Depends: r-bioc-biostrings (>= 2.72.1) but it is not going to be installed 197s Depends: r-bioc-zlibbioc (>= 1.50.0) but it is not going to be installed 197s Depends: r-bioc-rsamtools (>= 2.20.0) but it is not going to be installed 197s Depends: r-bioc-genomicalignments (>= 1.40.0) but it is not going to be installed 197s Depends: r-bioc-biocio (>= 1.14.0) but it is not going to be installed 197s r-bioc-s4vectors : Depends: r-api-bioc-3.19 197s r-bioc-singlecellexperiment : Depends: r-api-bioc-3.19 197s r-bioc-summarizedexperiment : Depends: r-api-bioc-3.19 197s Depends: r-bioc-matrixgenerics (>= 1.16.0) but it is not going to be installed 197s Depends: r-bioc-s4arrays (>= 1.4.1) but it is not going to be installed 197s r-bioc-ucsc.utils : Depends: r-api-bioc-3.19 197s E: Unable to correct problems, you have held broken packages. 197s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from plucky-proposed 197s Reading package lists... 198s Building dependency tree... 198s Reading state information... 198s Starting pkgProblemResolver with broken count: 0 198s Starting 2 pkgProblemResolver with broken count: 0 198s Done 200s The following NEW packages will be installed: 200s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 200s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax 200s javascript-common libaec0 libamd3 libasan8 libblas3 libboost-dev 200s libboost1.83-dev libcairo2 libcolamd3 libdatrie1 libdeflate0 200s libfftw3-double3 libfontconfig1 libgcc-14-dev libgfortran5 libglpk40 200s libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-103-1t64 libhdf5-hl-100t64 200s libhwasan0 libice6 libitm1 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap 200s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 200s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 200s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 200s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack3 200s liblerc4 liblsan0 libltdl7 liblua5.4-0 libpango-1.0-0 libpangocairo-1.0-0 200s libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 libquadmath0 200s libsharpyuv0 libsm6 libstdc++-14-dev libsuitesparseconfig7 libsz2 libtcl8.6 200s libthai-data libthai0 libtiff6 libtk8.6 libtsan2 libubsan1 libwebp7 200s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 littler 200s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 200s r-base-core r-bioc-biobase r-bioc-biocgenerics r-bioc-biocio 200s r-bioc-biocparallel r-bioc-biocviews r-bioc-biostrings r-bioc-delayedarray 200s r-bioc-deseq2 r-bioc-genomeinfodb r-bioc-genomeinfodbdata 200s r-bioc-genomicalignments r-bioc-genomicranges r-bioc-graph 200s r-bioc-hsmmsinglecell r-bioc-iranges r-bioc-limma r-bioc-matrixgenerics 200s r-bioc-monocle r-bioc-multtest r-bioc-rbgl r-bioc-rhtslib r-bioc-rsamtools 200s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors 200s r-bioc-singlecellexperiment r-bioc-sparsearray r-bioc-summarizedexperiment 200s r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-ape 200s r-cran-askpass r-cran-base64enc r-cran-beeswarm r-cran-bh r-cran-biocmanager 200s r-cran-bit r-cran-bit64 r-cran-bitops r-cran-brio r-cran-bslib r-cran-cachem 200s r-cran-cairo r-cran-callr r-cran-caret r-cran-catools r-cran-class 200s r-cran-cli r-cran-clock r-cran-cluster r-cran-codetools r-cran-colorspace 200s r-cran-colourpicker r-cran-combinat r-cran-commonmark r-cran-conquer 200s r-cran-cowplot r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl 200s r-cran-data.table r-cran-ddrtree r-cran-deldir r-cran-deoptimr r-cran-desc 200s r-cran-diagram r-cran-diffobj r-cran-digest r-cran-dotcall64 r-cran-dplyr 200s r-cran-dqrng r-cran-e1071 r-cran-evaluate r-cran-fansi r-cran-farver 200s r-cran-fastdummies r-cran-fastica r-cran-fastmap r-cran-fitdistrplus 200s r-cran-fnn r-cran-fontawesome r-cran-foreach r-cran-formatr r-cran-fs 200s r-cran-futile.logger r-cran-futile.options r-cran-future r-cran-future.apply 200s r-cran-gdata r-cran-generics r-cran-ggbeeswarm r-cran-ggplot2 r-cran-ggrastr 200s r-cran-ggrepel r-cran-ggridges r-cran-globals r-cran-glue r-cran-goftest 200s r-cran-gower r-cran-gplots r-cran-gridextra r-cran-gtable r-cran-gtools 200s r-cran-hardhat r-cran-hdf5r r-cran-here r-cran-highr r-cran-htmltools 200s r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-ica r-cran-igraph 200s r-cran-ipred r-cran-irlba r-cran-isoband r-cran-iterators r-cran-jquerylib 200s r-cran-jsonlite r-cran-kernlab r-cran-kernsmooth r-cran-knitr 200s r-cran-labeling r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lava 200s r-cran-lazyeval r-cran-leiden r-cran-leidenbase r-cran-lifecycle 200s r-cran-listenv r-cran-littler r-cran-lmtest r-cran-locfit r-cran-lubridate 200s r-cran-magrittr r-cran-mass r-cran-mathjaxr r-cran-matrix 200s r-cran-matrixmodels r-cran-matrixstats r-cran-memoise r-cran-metap 200s r-cran-mgcv r-cran-mime r-cran-miniui r-cran-mixtools r-cran-mnormt 200s r-cran-modelmetrics r-cran-multcomp r-cran-munsell r-cran-mutoss 200s r-cran-mvtnorm r-cran-nlme r-cran-nnet r-cran-numderiv r-cran-openssl 200s r-cran-parallelly r-cran-patchwork r-cran-pbapply r-cran-pheatmap 200s r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 200s r-cran-pkgload r-cran-plotly r-cran-plotrix r-cran-plyr r-cran-png 200s r-cran-polyclip r-cran-praise r-cran-proc r-cran-processx r-cran-prodlim 200s r-cran-progressr r-cran-promises r-cran-proxy r-cran-ps r-cran-purrr 200s r-cran-qqconf r-cran-quantreg r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils 200s r-cran-r6 r-cran-ragg r-cran-rann r-cran-rappdirs r-cran-rbibutils 200s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppannoy r-cran-rcpparmadillo 200s r-cran-rcppeigen r-cran-rcpphnsw r-cran-rcppprogress r-cran-rcpptoml 200s r-cran-rcurl r-cran-rdpack r-cran-recipes r-cran-reshape2 r-cran-restfulr 200s r-cran-reticulate r-cran-rjson r-cran-rlang r-cran-rmarkdown 200s r-cran-robustbase r-cran-rocr r-cran-rpart r-cran-rprojroot r-cran-rspectra 200s r-cran-rsvd r-cran-rtsne r-cran-runit r-cran-sandwich r-cran-sass 200s r-cran-scales r-cran-scattermore r-cran-sctransform r-cran-segmented 200s r-cran-seurat r-cran-seuratobject r-cran-shape r-cran-shiny r-cran-shinyjs 200s r-cran-sitmo r-cran-slam r-cran-sn r-cran-snow r-cran-sourcetools r-cran-sp 200s r-cran-spam r-cran-sparsem r-cran-spatstat.data r-cran-spatstat.explore 200s r-cran-spatstat.geom r-cran-spatstat.random r-cran-spatstat.sparse 200s r-cran-spatstat.utils r-cran-squarem r-cran-statmod r-cran-stringi 200s r-cran-stringr r-cran-survival r-cran-sys r-cran-systemfonts r-cran-tensor 200s r-cran-testthat r-cran-textshaping r-cran-tfisher r-cran-th.data 200s r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-timechange 200s r-cran-timedate r-cran-tinytex r-cran-tzdb r-cran-utf8 r-cran-uwot 200s r-cran-vctrs r-cran-vgam r-cran-vipor r-cran-viridis r-cran-viridislite 200s r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml r-cran-xtable r-cran-yaml 200s r-cran-zoo unzip x11-common xdg-utils zip zlib1g-dev 200s The following packages will be upgraded: 200s gcc-14-base libatomic1 libgcc-s1 libstdc++6 200s 4 upgraded, 371 newly installed, 0 to remove and 126 not upgraded. 200s Need to get 414 MB of archives. 200s After this operation, 1094 MB of additional disk space will be used. 200s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 gcc-14-base amd64 14.2.0-13ubuntu1 [53.0 kB] 200s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libstdc++6 amd64 14.2.0-13ubuntu1 [787 kB] 200s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libatomic1 amd64 14.2.0-13ubuntu1 [10.3 kB] 200s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libgcc-s1 amd64 14.2.0-13ubuntu1 [78.2 kB] 200s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 200s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 200s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB] 200s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB] 200s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB] 200s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 200s Get:11 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 200s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 200s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 11+nmu1 [5936 B] 200s Get:14 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 200s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libgomp1 amd64 14.2.0-13ubuntu1 [148 kB] 200s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libsuitesparseconfig7 amd64 1:7.8.3+dfsg-2 [13.4 kB] 200s Get:17 http://ftpmaster.internal/ubuntu plucky/universe amd64 libamd3 amd64 1:7.8.3+dfsg-2 [31.1 kB] 200s Get:18 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libasan8 amd64 14.2.0-13ubuntu1 [2998 kB] 200s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-4 [332 kB] 200s Get:20 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libitm1 amd64 14.2.0-13ubuntu1 [29.1 kB] 200s Get:21 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 liblsan0 amd64 14.2.0-13ubuntu1 [1317 kB] 200s Get:22 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libtsan2 amd64 14.2.0-13ubuntu1 [2732 kB] 200s Get:23 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libubsan1 amd64 14.2.0-13ubuntu1 [1177 kB] 200s Get:24 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libhwasan0 amd64 14.2.0-13ubuntu1 [1634 kB] 200s Get:25 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libquadmath0 amd64 14.2.0-13ubuntu1 [153 kB] 200s Get:26 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libgcc-14-dev amd64 14.2.0-13ubuntu1 [2815 kB] 200s Get:27 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libstdc++-14-dev amd64 14.2.0-13ubuntu1 [2508 kB] 200s Get:28 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libboost1.83-dev amd64 1.83.0-4ubuntu2 [10.7 MB] 200s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost-dev amd64 1.83.0.2ubuntu1 [4468 B] 200s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 200s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 200s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 200s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 200s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 200s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libcolamd3 amd64 1:7.8.3+dfsg-2 [19.5 kB] 200s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 200s Get:37 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB] 200s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libfftw3-double3 amd64 3.3.10-2fakesync1build1 [839 kB] 200s Get:39 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libgfortran5 amd64 14.2.0-13ubuntu1 [909 kB] 200s Get:40 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libltdl7 amd64 2.5.4-2 [46.0 kB] 200s Get:41 http://ftpmaster.internal/ubuntu plucky/universe amd64 libglpk40 amd64 5.0-1build2 [369 kB] 200s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 200s Get:43 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB] 200s Get:44 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 200s Get:45 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-103-1t64 amd64 1.10.10+repack-5ubuntu1 [1367 kB] 200s Get:46 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-5ubuntu1 [59.5 kB] 200s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 200s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 200s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 200s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 200s Get:51 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 200s Get:52 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 200s Get:53 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 200s Get:54 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 200s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 200s Get:56 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 200s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 200s Get:58 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 200s Get:59 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 200s Get:60 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 200s Get:61 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 200s Get:62 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 200s Get:63 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 200s Get:64 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 201s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-4 [3177 kB] 201s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 201s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 liblua5.4-0 amd64 5.4.7-1 [196 kB] 201s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 201s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 201s Get:70 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpango-1.0-0 amd64 1.56.0-3 [255 kB] 201s Get:71 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpangoft2-1.0-0 amd64 1.56.0-3 [52.5 kB] 201s Get:72 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpangocairo-1.0-0 amd64 1.56.0-3 [29.1 kB] 201s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB] 201s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB] 201s Get:75 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 201s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 201s Get:77 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB] 201s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 201s Get:79 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 201s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 201s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 201s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 201s Get:83 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB] 201s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 201s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu1 [185 kB] 201s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 201s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 201s Get:88 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-base-core amd64 4.4.2-1build1 [28.9 MB] 201s Get:89 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-2 [96.6 kB] 201s Get:90 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-2 [2554 B] 201s Get:91 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 201s Get:92 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 201s Get:93 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 201s Get:94 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 201s Get:95 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc amd64 3.1.11.1+ds-2 [27.2 MB] 202s Get:96 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 202s Get:97 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-biobase amd64 2.66.0-2 [2332 kB] 202s Get:98 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2065 kB] 202s Get:99 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 202s Get:100 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-formatr all 1.14-2 [152 kB] 202s Get:101 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 203s Get:102 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 203s Get:103 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 203s Get:104 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 203s Get:105 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-codetools all 0.2-20-1 [90.5 kB] 203s Get:106 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bh all 1.84.0-1 [5962 B] 203s Get:107 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cpp11 all 0.5.0-1 [221 kB] 203s Get:108 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-biocparallel amd64 1.40.0-2 [1337 kB] 203s Get:109 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-graph amd64 1.84.1-1 [1298 kB] 203s Get:110 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-rbgl amd64 1.82.0+dfsg-2 [588 kB] 203s Get:111 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xml amd64 3.99-0.18-1 [1748 kB] 203s Get:112 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bitops amd64 1.0-8-1 [30.3 kB] 203s Get:113 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcurl amd64 1.98-1.16+dfsg-1 [807 kB] 203s Get:114 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-runit all 0.4.33-1 [377 kB] 203s Get:115 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 203s Get:116 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-biocviews all 1.74.0-2 [670 kB] 203s Get:117 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-iranges amd64 2.40.1-2 [2310 kB] 203s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 203s Get:119 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 203s Get:120 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-xvector amd64 0.46.0-2 [620 kB] 203s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-curl amd64 5.2.3+dfsg-1ubuntu1 [180 kB] 203s Get:122 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.8.9+dfsg-1 [445 kB] 203s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 203s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB] 203s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB] 203s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-openssl amd64 2.2.0+dfsg-1 [405 kB] 203s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB] 203s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 204s Get:129 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 204s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 204s Get:131 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-genomeinfodb all 1.42.1+dfsg-2 [3883 kB] 204s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.2-1 [164 kB] 204s Get:133 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-biostrings amd64 2.74.1+dfsg-2 [13.3 MB] 205s Get:134 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 205s Get:135 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrix amd64 1.7-1-1 [4199 kB] 205s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixstats amd64 1.4.1-1 [513 kB] 205s Get:137 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-matrixgenerics all 1.18.0-2 [446 kB] 205s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-abind all 1.4-8-1 [66.9 kB] 205s Get:139 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-s4arrays amd64 1.6.0+dfsg-2 [698 kB] 205s Get:140 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-sparsearray amd64 1.6.0+dfsg-2 [1392 kB] 205s Get:141 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-delayedarray amd64 0.32.0+dfsg-2 [2064 kB] 205s Get:142 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-genomicranges amd64 1.58.0+dfsg-2 [2083 kB] 205s Get:143 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 205s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-locfit amd64 1.5-9.10-1 [518 kB] 205s Get:145 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.3-1 [1348 kB] 205s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 205s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.4-1 [1708 kB] 205s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 205s Get:149 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 205s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 206s Get:151 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-mass amd64 7.3-64-1 [1114 kB] 206s Get:152 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nlme amd64 3.1.166-1 [2314 kB] 206s Get:153 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB] 206s Get:154 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB] 206s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 206s Get:156 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colorspace amd64 2.1-1+dfsg-1 [1563 kB] 206s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-munsell all 0.5.1-1 [213 kB] 206s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 206s Get:159 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridislite all 0.4.2-2 [1088 kB] 206s Get:160 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scales all 1.3.0-1 [603 kB] 206s Get:161 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 206s Get:162 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 206s Get:163 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 206s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 206s Get:165 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 206s Get:166 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 206s Get:167 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-2 [415 kB] 206s Get:168 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 206s Get:169 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 206s Get:170 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 206s Get:171 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-rcpp amd64 1.0.14-1 [1998 kB] 206s Get:172 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpparmadillo amd64 14.2.2-1-1 [864 kB] 206s Get:173 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-deseq2 amd64 1.46.0+dfsg-2 [1250 kB] 206s Get:174 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-rhtslib amd64 3.2.0+dfsg-2 [1499 kB] 206s Get:175 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-rsamtools amd64 2.22.0+dfsg-2 [3745 kB] 207s Get:176 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-genomicalignments amd64 1.42.0-2 [2165 kB] 207s Get:177 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-hsmmsinglecell all 1.26.0-2 [16.7 MB] 207s Get:178 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-statmod amd64 1.5.0-1 [295 kB] 207s Get:179 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-limma amd64 3.62.2+dfsg-1 [1969 kB] 208s Get:180 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vgam amd64 1.1-11-1 [7726 kB] 208s Get:181 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-irlba amd64 2.3.5.1-4 [295 kB] 208s Get:182 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1428 kB] 208s Get:183 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ddrtree amd64 0.1.5-2 [154 kB] 208s Get:184 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-igraph amd64 2.0.3-1 [5098 kB] 208s Get:185 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB] 208s Get:186 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cluster amd64 2.1.8-1 [579 kB] 208s Get:187 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-combinat all 0.0-8-7build1 [43.1 kB] 208s Get:188 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastica amd64 1.2-7-1 [46.6 kB] 208s Get:189 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rtsne amd64 0.17-1 [109 kB] 208s Get:190 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-stringi amd64 1.8.4-1build1 [927 kB] 208s Get:191 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 208s Get:192 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reshape2 amd64 1.4.4-2build1 [114 kB] 208s Get:193 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-leidenbase amd64 0.1.27-1 [2366 kB] 208s Get:194 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB] 208s Get:195 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB] 208s Get:196 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB] 208s Get:197 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pheatmap all 1.0.12-2build1 [78.2 kB] 208s Get:198 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB] 208s Get:199 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-slam amd64 0.1-55-1 [188 kB] 208s Get:200 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gridextra all 2.3-3build1 [1024 kB] 208s Get:201 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridis all 0.6.5-1 [2770 kB] 209s Get:202 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rann amd64 2.6.2-1 [46.3 kB] 209s Get:203 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-monocle amd64 2.34.0-2 [1522 kB] 209s Get:204 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-survival amd64 3.8-3-1 [8239 kB] 209s Get:205 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-multtest amd64 2.62.0-2 [844 kB] 209s Get:206 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rjson amd64 0.2.23-1 [104 kB] 209s Get:207 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB] 209s Get:208 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-restfulr amd64 0.0.15-1 [380 kB] 209s Get:209 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-rtracklayer amd64 1.66.0-2 [5227 kB] 210s Get:210 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-singlecellexperiment all 1.28.1+ds-2 [829 kB] 210s Get:211 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB] 210s Get:212 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ape amd64 5.8-1 [2923 kB] 210s Get:213 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 210s Get:214 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-beeswarm amd64 0.4.0-1 [82.3 kB] 210s Get:215 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bit amd64 4.0.5-1 [1063 kB] 210s Get:216 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bit64 amd64 4.0.5-1 [465 kB] 210s Get:217 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 210s Get:218 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 210s Get:219 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 210s Get:220 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 210s Get:221 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 210s Get:222 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 210s Get:223 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.4+dfsg-1 [245 kB] 210s Get:224 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 210s Get:225 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 210s Get:226 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.7.0+dfsg-1 [4255 kB] 210s Get:227 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cairo amd64 1.6-2-1 [88.8 kB] 210s Get:228 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ps amd64 1.8.0-1 [395 kB] 210s Get:229 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-processx amd64 3.8.4-1 [353 kB] 210s Get:230 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 210s Get:231 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-class amd64 7.3-23-1 [92.7 kB] 210s Get:232 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-e1071 amd64 1.7-16-1 [565 kB] 210s Get:233 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-iterators all 1.0.14-1 [336 kB] 210s Get:234 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-foreach all 1.5.2-1 [124 kB] 210s Get:235 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-data.table amd64 1.16.4+dfsg-1 [2032 kB] 210s Get:236 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-modelmetrics amd64 1.2.2.2-1build1 [128 kB] 210s Get:237 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proc amd64 1.18.5-1 [966 kB] 210s Get:238 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tzdb amd64 0.4.0-2 [521 kB] 210s Get:239 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-clock amd64 0.7.1-1 [1804 kB] 210s Get:240 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gower amd64 1.0.1-1 [207 kB] 210s Get:241 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-hardhat all 1.4.0+dfsg-1 [565 kB] 210s Get:242 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rpart amd64 4.1.24-1 [670 kB] 210s Get:243 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nnet amd64 7.3-20-1 [116 kB] 210s Get:244 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shape all 1.4.6.1-1 [749 kB] 210s Get:245 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diagram all 1.6.5-2 [656 kB] 210s Get:246 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernsmooth amd64 2.23-26-1 [94.5 kB] 210s Get:247 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-globals all 0.16.3-1 [120 kB] 210s Get:248 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-listenv all 0.9.1+dfsg-1 [112 kB] 210s Get:249 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-parallelly amd64 1.38.0-1 [385 kB] 210s Get:250 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-future all 1.34.0+dfsg-1 [646 kB] 210s Get:251 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-future.apply all 1.11.2+dfsg-1 [172 kB] 210s Get:252 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-numderiv all 2016.8-1.1-3 [115 kB] 210s Get:253 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-progressr all 0.14.0-1 [338 kB] 210s Get:254 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-squarem all 2021.1-1 [179 kB] 210s Get:255 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lava all 1.7.3+dfsg-1 [2166 kB] 210s Get:256 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-prodlim amd64 2024.06.25-1 [415 kB] 210s Get:257 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ipred amd64 0.9-15-1 [386 kB] 210s Get:258 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-timechange amd64 0.3.0-1 [178 kB] 210s Get:259 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lubridate amd64 1.9.3+dfsg-1 [1010 kB] 210s Get:260 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-purrr amd64 1.0.2-1 [502 kB] 210s Get:261 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 210s Get:262 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-timedate amd64 4041.110-1 [1208 kB] 210s Get:263 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-recipes all 1.1.0+dfsg-1 [2035 kB] 211s Get:264 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-caret amd64 6.0-94+dfsg-1 [3434 kB] 211s Get:265 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-catools amd64 1.18.2-1 [201 kB] 211s Get:266 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 1.0.0-1 [111 kB] 211s Get:267 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xfun amd64 0.49+dfsg-1 [545 kB] 211s Get:268 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 211s Get:269 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 211s Get:270 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 211s Get:271 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 211s Get:272 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tinytex all 0.53-1 [145 kB] 211s Get:273 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-modernizr all 3.13.0-0.1 [101 kB] 211s Get:274 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.3.2+dfsg-1 [123 kB] 211s Get:275 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.0+dfsg-1 [287 kB] 211s Get:276 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 211s Get:277 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 211s Get:278 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 211s Get:279 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.2-2 [137 kB] 211s Get:280 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 211s Get:281 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.9.1+dfsg-1 [3111 kB] 211s Get:282 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rmarkdown all 2.28+dfsg-1 [1501 kB] 211s Get:283 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 211s Get:284 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-miniui all 0.1.1.1-3build1 [36.1 kB] 211s Get:285 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shinyjs all 2.1.0-1 [967 kB] 211s Get:286 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colourpicker all 1.3.0+dfsg-1 [1191 kB] 211s Get:287 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-conquer amd64 1.3.3-1 [499 kB] 211s Get:288 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cowplot all 1.1.3+dfsg-1 [614 kB] 211s Get:289 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lazyeval amd64 0.2.2-1build1 [144 kB] 211s Get:290 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 211s Get:291 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-deldir amd64 2.0-4-1build1 [270 kB] 211s Get:292 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-deoptimr all 1.1-3-1-1 [76.6 kB] 211s Get:293 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 211s Get:294 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 211s Get:295 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dotcall64 amd64 1.1-1-1 [38.1 kB] 211s Get:296 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sitmo amd64 2.0.2-1 [130 kB] 211s Get:297 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dqrng amd64 0.3.2+dfsg-1 [161 kB] 211s Get:298 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastdummies all 1.7.4-1 [49.7 kB] 211s Get:299 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fitdistrplus all 1.2-1-1 [2038 kB] 211s Get:300 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fnn amd64 1.1.4.1-1 [126 kB] 211s Get:301 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtools amd64 3.9.5-1 [340 kB] 211s Get:302 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gdata all 3.0.1-1 [491 kB] 211s Get:303 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vipor all 0.4.7-1 [4624 kB] 212s Get:304 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggbeeswarm all 0.7.2-1 [1732 kB] 212s Get:305 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-png amd64 0.1-8-1build2 [40.6 kB] 212s Get:306 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-systemfonts amd64 1.1.0-1 [245 kB] 212s Get:307 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-textshaping amd64 0.3.7-2 [95.5 kB] 212s Get:308 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ragg amd64 1.3.3-1 [510 kB] 212s Get:309 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggrastr all 1.0.2-1 [2566 kB] 212s Get:310 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggrepel amd64 0.9.5-2 [254 kB] 212s Get:311 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggridges all 0.5.6-1 [2195 kB] 212s Get:312 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-goftest amd64 1.2-3-1 [59.5 kB] 212s Get:313 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gplots all 3.2.0-1 [484 kB] 212s Get:314 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-hdf5r amd64 1.3.11+dfsg-1 [1979 kB] 213s Get:315 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rprojroot all 2.0.4-1 [124 kB] 213s Get:316 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-here all 1.0.1-2 [50.3 kB] 213s Get:317 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ica all 1.0-3-1 [85.4 kB] 213s Get:318 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernlab amd64 0.9-33-1 [1947 kB] 213s Get:319 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpptoml amd64 0.2.2+dfsg-1 [110 kB] 213s Get:320 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reticulate amd64 1.39.0+dfsg-1 [1238 kB] 213s Get:321 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-leiden all 0.4.3.1+dfsg-1 [71.9 kB] 213s Get:322 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-zoo amd64 1.8-12-2 [984 kB] 213s Get:323 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lmtest amd64 0.9.40-1 [396 kB] 213s Get:324 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mathjaxr all 1.6-0-1 [605 kB] 213s Get:325 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixmodels all 0.5-3-1 [361 kB] 213s Get:326 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rbibutils amd64 2.3-1 [1023 kB] 213s Get:327 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rdpack all 2.6.2-1 [757 kB] 213s Get:328 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mnormt amd64 2.1.1-2 [170 kB] 213s Get:329 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sparsem amd64 1.84-2-1 [813 kB] 213s Get:330 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-quantreg amd64 5.99.1-1 [1455 kB] 213s Get:331 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sn all 2.1.1-2 [1815 kB] 213s Get:332 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-mvtnorm amd64 1.3-3-1 [923 kB] 213s Get:333 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tfisher all 0.2.0-3 [79.8 kB] 213s Get:334 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plotrix all 3.8-4-1 [1120 kB] 213s Get:335 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-th.data all 1.1-2-2 [8794 kB] 213s Get:336 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sandwich all 3.1-1-1 [1483 kB] 213s Get:337 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-multcomp all 1.4-26-2 [699 kB] 213s Get:338 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mutoss all 0.1-13-1 [1123 kB] 213s Get:339 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-robustbase amd64 0.99-4-1-1 [3038 kB] 213s Get:340 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-qqconf amd64 1.3.2+dfsg-1 [157 kB] 213s Get:341 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-metap all 1.11-1 [570 kB] 213s Get:342 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plotly all 4.10.4+dfsg-2 [3666 kB] 214s Get:343 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-segmented all 2.1-3-1 [1366 kB] 214s Get:344 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mixtools amd64 2.0.0-1 [1399 kB] 214s Get:345 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-patchwork all 1.3.0-1 [3220 kB] 214s Get:346 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pbapply all 1.7-2-1 [102 kB] 214s Get:347 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgbuild all 1.4.4-1 [212 kB] 214s Get:348 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgload all 1.4.0-1 [247 kB] 214s Get:349 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-polyclip amd64 1.10-7-1 [116 kB] 214s Get:350 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 214s Get:351 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 214s Get:352 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.oo all 1.26.0-1 [955 kB] 214s Get:353 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.utils all 2.12.3-1 [1386 kB] 214s Get:354 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppannoy amd64 0.0.22-1 [235 kB] 214s Get:355 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpphnsw amd64 0.5.0+ds-1 [171 kB] 214s Get:356 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppprogress all 0.4.2-2build1 [22.0 kB] 214s Get:357 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rocr all 1.0-11-3 [456 kB] 214s Get:358 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rspectra amd64 0.16-2-1 [448 kB] 214s Get:359 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rsvd all 1.0.5-1 [3589 kB] 214s Get:360 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scattermore amd64 1.2-1 [331 kB] 214s Get:361 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sctransform amd64 0.4.1-1 [504 kB] 214s Get:362 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sp amd64 1:2.1-4+dfsg-1 [1472 kB] 214s Get:363 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spam amd64 2.11-0-1 [2758 kB] 214s Get:364 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-seuratobject amd64 5.0.2-1 [1744 kB] 214s Get:365 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.utils amd64 3.1-0-1 [381 kB] 214s Get:366 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.data all 3.1-2-1 [4039 kB] 214s Get:367 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.geom amd64 3.2-9-2 [3946 kB] 214s Get:368 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.random amd64 3.2-3-1 [1169 kB] 215s Get:369 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tensor all 1.5-4 [15.7 kB] 215s Get:370 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.sparse amd64 3.0-3-1 [215 kB] 215s Get:371 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.explore amd64 3.2-7-1 [3432 kB] 215s Get:372 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-uwot amd64 0.2.2-1 [947 kB] 215s Get:373 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-seurat amd64 5.1.0-1 [3255 kB] 215s Get:374 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-waldo all 0.6.1-1 [150 kB] 215s Get:375 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-testthat amd64 3.2.1.1-1 [1636 kB] 216s Preconfiguring packages ... 216s Fetched 414 MB in 16s (25.6 MB/s) 216s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75824 files and directories currently installed.) 216s Preparing to unpack .../gcc-14-base_14.2.0-13ubuntu1_amd64.deb ... 216s Unpacking gcc-14-base:amd64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 216s Setting up gcc-14-base:amd64 (14.2.0-13ubuntu1) ... 216s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75824 files and directories currently installed.) 216s Preparing to unpack .../libstdc++6_14.2.0-13ubuntu1_amd64.deb ... 216s Unpacking libstdc++6:amd64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 216s Setting up libstdc++6:amd64 (14.2.0-13ubuntu1) ... 216s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75824 files and directories currently installed.) 216s Preparing to unpack .../libatomic1_14.2.0-13ubuntu1_amd64.deb ... 216s Unpacking libatomic1:amd64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 216s Preparing to unpack .../libgcc-s1_14.2.0-13ubuntu1_amd64.deb ... 216s Unpacking libgcc-s1:amd64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 216s Setting up libgcc-s1:amd64 (14.2.0-13ubuntu1) ... 216s Selecting previously unselected package fonts-dejavu-mono. 216s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75824 files and directories currently installed.) 216s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8_all.deb ... 216s Unpacking fonts-dejavu-mono (2.37-8) ... 216s Selecting previously unselected package fonts-dejavu-core. 216s Preparing to unpack .../001-fonts-dejavu-core_2.37-8_all.deb ... 216s Unpacking fonts-dejavu-core (2.37-8) ... 216s Selecting previously unselected package fontconfig-config. 216s Preparing to unpack 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package fonts-mathjax. 217s Preparing to unpack .../007-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 217s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 217s Selecting previously unselected package javascript-common. 217s Preparing to unpack .../008-javascript-common_11+nmu1_all.deb ... 217s Unpacking javascript-common (11+nmu1) ... 217s Selecting previously unselected package libaec0:amd64. 217s Preparing to unpack .../009-libaec0_1.1.3-1_amd64.deb ... 217s Unpacking libaec0:amd64 (1.1.3-1) ... 217s Selecting previously unselected package libgomp1:amd64. 217s Preparing to unpack .../010-libgomp1_14.2.0-13ubuntu1_amd64.deb ... 217s Unpacking libgomp1:amd64 (14.2.0-13ubuntu1) ... 217s Selecting previously unselected package libsuitesparseconfig7:amd64. 217s Preparing to unpack .../011-libsuitesparseconfig7_1%3a7.8.3+dfsg-2_amd64.deb ... 217s Unpacking libsuitesparseconfig7:amd64 (1:7.8.3+dfsg-2) ... 217s Selecting previously unselected package libamd3:amd64. 217s Preparing to unpack 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previously unselected package libxrender1:amd64. 220s Preparing to unpack .../028-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 220s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 220s Selecting previously unselected package libcairo2:amd64. 220s Preparing to unpack .../029-libcairo2_1.18.2-2_amd64.deb ... 220s Unpacking libcairo2:amd64 (1.18.2-2) ... 220s Selecting previously unselected package libcolamd3:amd64. 220s Preparing to unpack .../030-libcolamd3_1%3a7.8.3+dfsg-2_amd64.deb ... 220s Unpacking libcolamd3:amd64 (1:7.8.3+dfsg-2) ... 220s Selecting previously unselected package libdatrie1:amd64. 220s Preparing to unpack .../031-libdatrie1_0.2.13-3build1_amd64.deb ... 220s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 220s Selecting previously unselected package libdeflate0:amd64. 220s Preparing to unpack .../032-libdeflate0_1.23-1_amd64.deb ... 220s Unpacking libdeflate0:amd64 (1.23-1) ... 220s Selecting previously unselected package libfftw3-double3:amd64. 220s Preparing to unpack .../033-libfftw3-double3_3.3.10-2fakesync1build1_amd64.deb ... 220s Unpacking libfftw3-double3:amd64 (3.3.10-2fakesync1build1) ... 220s Selecting previously unselected package libgfortran5:amd64. 220s Preparing to unpack .../034-libgfortran5_14.2.0-13ubuntu1_amd64.deb ... 220s Unpacking libgfortran5:amd64 (14.2.0-13ubuntu1) ... 220s Selecting previously unselected package libltdl7:amd64. 220s Preparing to unpack .../035-libltdl7_2.5.4-2_amd64.deb ... 220s Unpacking libltdl7:amd64 (2.5.4-2) ... 220s Selecting previously unselected package libglpk40:amd64. 220s Preparing to unpack .../036-libglpk40_5.0-1build2_amd64.deb ... 220s Unpacking libglpk40:amd64 (5.0-1build2) ... 220s Selecting previously unselected package libgraphite2-3:amd64. 220s Preparing to unpack .../037-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 220s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 220s Selecting previously unselected package libharfbuzz0b:amd64. 220s Preparing to unpack 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.../043-libice6_2%3a1.1.1-1_amd64.deb ... 220s Unpacking libice6:amd64 (2:1.1.1-1) ... 220s Selecting previously unselected package libjpeg-turbo8:amd64. 220s Preparing to unpack .../044-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ... 220s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 220s Selecting previously unselected package libjpeg8:amd64. 220s Preparing to unpack .../045-libjpeg8_8c-2ubuntu11_amd64.deb ... 220s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 220s Selecting previously unselected package libjs-bootstrap. 220s Preparing to unpack .../046-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 220s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 220s Selecting previously unselected package libjs-popper.js. 220s Preparing to unpack .../047-libjs-popper.js_1.16.1+ds-6_all.deb ... 220s Unpacking libjs-popper.js (1.16.1+ds-6) ... 220s Selecting previously unselected package libjs-bootstrap4. 220s Preparing to unpack .../048-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 220s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 221s Selecting previously unselected package libjs-d3. 221s Preparing to unpack .../049-libjs-d3_3.5.17-4_all.deb ... 221s Unpacking libjs-d3 (3.5.17-4) ... 221s Selecting previously unselected package libjs-es5-shim. 221s Preparing to unpack .../050-libjs-es5-shim_4.6.7-2_all.deb ... 221s Unpacking libjs-es5-shim (4.6.7-2) ... 221s Selecting previously unselected package libjs-highlight.js. 221s Preparing to unpack .../051-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 221s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 221s Selecting previously unselected package libjs-jquery. 221s Preparing to unpack .../052-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 221s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 221s Selecting previously unselected package libjs-jquery-datatables. 221s Preparing to unpack .../053-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 221s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 221s Selecting previously 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package libjs-prettify. 221s Preparing to unpack .../059-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 221s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 221s Selecting previously unselected package liblapack3:amd64. 221s Preparing to unpack .../060-liblapack3_3.12.0-4_amd64.deb ... 221s Unpacking liblapack3:amd64 (3.12.0-4) ... 221s Selecting previously unselected package liblerc4:amd64. 221s Preparing to unpack .../061-liblerc4_4.0.0+ds-5ubuntu1_amd64.deb ... 221s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 221s Selecting previously unselected package liblua5.4-0:amd64. 221s Preparing to unpack .../062-liblua5.4-0_5.4.7-1_amd64.deb ... 221s Unpacking liblua5.4-0:amd64 (5.4.7-1) ... 221s Selecting previously unselected package libthai-data. 221s Preparing to unpack .../063-libthai-data_0.1.29-2build1_all.deb ... 221s Unpacking libthai-data (0.1.29-2build1) ... 221s Selecting previously unselected package libthai0:amd64. 221s Preparing to unpack .../064-libthai0_0.1.29-2build1_amd64.deb ... 221s Unpacking libthai0:amd64 (0.1.29-2build1) ... 221s Selecting previously unselected package libpango-1.0-0:amd64. 221s Preparing to unpack .../065-libpango-1.0-0_1.56.0-3_amd64.deb ... 221s Unpacking libpango-1.0-0:amd64 (1.56.0-3) ... 221s Selecting previously unselected package libpangoft2-1.0-0:amd64. 221s Preparing to unpack .../066-libpangoft2-1.0-0_1.56.0-3_amd64.deb ... 221s Unpacking libpangoft2-1.0-0:amd64 (1.56.0-3) ... 221s Selecting previously unselected package libpangocairo-1.0-0:amd64. 221s Preparing to unpack .../067-libpangocairo-1.0-0_1.56.0-3_amd64.deb ... 221s Unpacking libpangocairo-1.0-0:amd64 (1.56.0-3) ... 221s Selecting previously unselected package libpaper2:amd64. 221s Preparing to unpack .../068-libpaper2_2.2.5-0.3_amd64.deb ... 221s Unpacking libpaper2:amd64 (2.2.5-0.3) ... 221s Selecting previously unselected package libpaper-utils. 221s Preparing to unpack .../069-libpaper-utils_2.2.5-0.3_amd64.deb ... 221s Unpacking libpaper-utils (2.2.5-0.3) ... 221s Selecting previously unselected package libsharpyuv0:amd64. 221s Preparing to unpack .../070-libsharpyuv0_1.5.0-0.1_amd64.deb ... 221s Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ... 221s Selecting previously unselected package libsm6:amd64. 221s Preparing to unpack .../071-libsm6_2%3a1.2.4-1_amd64.deb ... 221s Unpacking libsm6:amd64 (2:1.2.4-1) ... 221s Selecting previously unselected package libtcl8.6:amd64. 221s Preparing to unpack .../072-libtcl8.6_8.6.16+dfsg-1_amd64.deb ... 221s Unpacking libtcl8.6:amd64 (8.6.16+dfsg-1) ... 222s Selecting previously unselected package libjbig0:amd64. 222s Preparing to unpack .../073-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 222s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 222s Selecting previously unselected package libwebp7:amd64. 222s Preparing to unpack .../074-libwebp7_1.5.0-0.1_amd64.deb ... 222s Unpacking libwebp7:amd64 (1.5.0-0.1) ... 222s Selecting previously unselected package libtiff6:amd64. 222s Preparing to unpack .../075-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ... 222s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 222s Selecting previously unselected package libxft2:amd64. 222s Preparing to unpack .../076-libxft2_2.3.6-1build1_amd64.deb ... 222s Unpacking libxft2:amd64 (2.3.6-1build1) ... 222s Selecting previously unselected package libxss1:amd64. 222s Preparing to unpack .../077-libxss1_1%3a1.2.3-1build3_amd64.deb ... 222s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 222s Selecting previously unselected package libtk8.6:amd64. 222s Preparing to unpack .../078-libtk8.6_8.6.16-1_amd64.deb ... 222s Unpacking libtk8.6:amd64 (8.6.16-1) ... 222s Selecting previously unselected package libxt6t64:amd64. 222s Preparing to unpack .../079-libxt6t64_1%3a1.2.1-1.2build1_amd64.deb ... 222s Unpacking libxt6t64:amd64 (1:1.2.1-1.2build1) ... 222s Selecting previously unselected package zip. 222s Preparing to unpack .../080-zip_3.0-14ubuntu1_amd64.deb ... 222s Unpacking zip (3.0-14ubuntu1) ... 222s Selecting previously unselected package unzip. 222s Preparing to unpack .../081-unzip_6.0-28ubuntu6_amd64.deb ... 222s Unpacking unzip (6.0-28ubuntu6) ... 222s Selecting previously unselected package xdg-utils. 222s Preparing to unpack .../082-xdg-utils_1.2.1-0ubuntu1_all.deb ... 222s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 222s Selecting previously unselected package r-base-core. 222s Preparing to unpack .../083-r-base-core_4.4.2-1build1_amd64.deb ... 222s Unpacking r-base-core (4.4.2-1build1) ... 222s Selecting previously unselected package r-cran-littler. 222s Preparing to unpack .../084-r-cran-littler_0.3.20-2_amd64.deb ... 222s Unpacking r-cran-littler (0.3.20-2) ... 222s Selecting previously unselected package littler. 222s Preparing to unpack .../085-littler_0.3.20-2_all.deb ... 222s Unpacking littler (0.3.20-2) ... 223s Selecting previously unselected package node-bootstrap-sass. 223s Preparing to unpack .../086-node-bootstrap-sass_3.4.3-2_all.deb ... 223s Unpacking node-bootstrap-sass (3.4.3-2) ... 223s Selecting previously unselected package node-html5shiv. 223s Preparing to unpack .../087-node-html5shiv_3.7.3+dfsg-5_all.deb ... 223s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 223s Selecting previously unselected package node-normalize.css. 223s Preparing to unpack .../088-node-normalize.css_8.0.1-5_all.deb ... 223s Unpacking node-normalize.css (8.0.1-5) ... 223s Selecting previously unselected package pandoc-data. 223s Preparing to unpack .../089-pandoc-data_3.1.11.1-3build1_all.deb ... 223s Unpacking pandoc-data (3.1.11.1-3build1) ... 223s Selecting previously unselected package pandoc. 223s Preparing to unpack .../090-pandoc_3.1.11.1+ds-2_amd64.deb ... 223s Unpacking pandoc (3.1.11.1+ds-2) ... 224s Selecting previously unselected package r-bioc-biocgenerics. 224s Preparing to unpack .../091-r-bioc-biocgenerics_0.52.0-2_all.deb ... 224s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 224s Selecting previously unselected package r-bioc-biobase. 224s Preparing to unpack .../092-r-bioc-biobase_2.66.0-2_amd64.deb ... 224s Unpacking r-bioc-biobase (2.66.0-2) ... 224s Selecting previously unselected package r-bioc-s4vectors. 224s Preparing to unpack .../093-r-bioc-s4vectors_0.44.0+dfsg-2_amd64.deb ... 224s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 224s Selecting previously unselected package r-bioc-biocio. 224s Preparing to unpack .../094-r-bioc-biocio_1.16.0+dfsg-2_all.deb ... 224s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ... 224s Selecting previously unselected package r-cran-formatr. 224s Preparing to unpack .../095-r-cran-formatr_1.14-2_all.deb ... 224s Unpacking r-cran-formatr (1.14-2) ... 224s Selecting previously unselected package r-cran-lambda.r. 224s Preparing to unpack .../096-r-cran-lambda.r_1.2.4-2build1_all.deb ... 224s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 224s Selecting previously unselected package r-cran-futile.options. 224s Preparing to unpack .../097-r-cran-futile.options_1.0.1-3build1_all.deb ... 224s Unpacking r-cran-futile.options (1.0.1-3build1) ... 224s Selecting previously unselected package r-cran-futile.logger. 224s Preparing to unpack .../098-r-cran-futile.logger_1.4.3-4build1_all.deb ... 224s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 224s Selecting previously unselected package r-cran-snow. 224s Preparing to unpack .../099-r-cran-snow_1%3a0.4.4-2_all.deb ... 224s Unpacking r-cran-snow (1:0.4.4-2) ... 224s Selecting previously unselected package r-cran-codetools. 224s Preparing to unpack .../100-r-cran-codetools_0.2-20-1_all.deb ... 224s Unpacking r-cran-codetools (0.2-20-1) ... 224s Selecting previously unselected package r-cran-bh. 224s Preparing to unpack .../101-r-cran-bh_1.84.0-1_all.deb ... 224s Unpacking r-cran-bh (1.84.0-1) ... 224s Selecting previously unselected package r-cran-cpp11. 224s Preparing to unpack .../102-r-cran-cpp11_0.5.0-1_all.deb ... 224s Unpacking r-cran-cpp11 (0.5.0-1) ... 224s Selecting previously unselected package r-bioc-biocparallel. 224s Preparing to unpack .../103-r-bioc-biocparallel_1.40.0-2_amd64.deb ... 224s Unpacking r-bioc-biocparallel (1.40.0-2) ... 224s Selecting previously unselected package r-bioc-graph. 224s Preparing to unpack .../104-r-bioc-graph_1.84.1-1_amd64.deb ... 224s Unpacking r-bioc-graph (1.84.1-1) ... 224s Selecting previously unselected package r-bioc-rbgl. 224s Preparing to unpack .../105-r-bioc-rbgl_1.82.0+dfsg-2_amd64.deb ... 224s Unpacking r-bioc-rbgl (1.82.0+dfsg-2) ... 224s Selecting previously unselected package r-cran-xml. 224s Preparing to unpack .../106-r-cran-xml_3.99-0.18-1_amd64.deb ... 224s Unpacking r-cran-xml (3.99-0.18-1) ... 224s Selecting previously unselected package r-cran-bitops. 224s Preparing to unpack .../107-r-cran-bitops_1.0-8-1_amd64.deb ... 224s Unpacking r-cran-bitops (1.0-8-1) ... 224s Selecting previously unselected package r-cran-rcurl. 224s Preparing to unpack .../108-r-cran-rcurl_1.98-1.16+dfsg-1_amd64.deb ... 224s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 224s Selecting previously unselected package r-cran-runit. 224s Preparing to unpack .../109-r-cran-runit_0.4.33-1_all.deb ... 224s Unpacking r-cran-runit (0.4.33-1) ... 224s Selecting previously unselected package r-cran-biocmanager. 224s Preparing to unpack .../110-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 224s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 224s Selecting previously unselected package r-bioc-biocviews. 224s Preparing to unpack .../111-r-bioc-biocviews_1.74.0-2_all.deb ... 224s Unpacking r-bioc-biocviews (1.74.0-2) ... 225s Selecting previously unselected package r-bioc-iranges. 225s Preparing to unpack .../112-r-bioc-iranges_2.40.1-2_amd64.deb ... 225s Unpacking r-bioc-iranges (2.40.1-2) ... 225s Selecting previously unselected package zlib1g-dev:amd64. 225s Preparing to unpack .../113-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ... 225s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 225s Selecting previously unselected package r-bioc-zlibbioc. 225s Preparing to unpack .../114-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 225s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 225s Selecting previously unselected package r-bioc-xvector. 225s Preparing to unpack .../115-r-bioc-xvector_0.46.0-2_amd64.deb ... 225s Unpacking r-bioc-xvector (0.46.0-2) ... 225s Selecting previously unselected package r-cran-curl. 225s Preparing to unpack .../116-r-cran-curl_5.2.3+dfsg-1ubuntu1_amd64.deb ... 225s Unpacking r-cran-curl (5.2.3+dfsg-1ubuntu1) ... 225s Selecting previously unselected package r-cran-jsonlite. 225s Preparing to unpack .../117-r-cran-jsonlite_1.8.9+dfsg-1_amd64.deb ... 225s Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ... 225s Selecting previously unselected package r-cran-mime. 225s Preparing to unpack .../118-r-cran-mime_0.12-2_amd64.deb ... 225s Unpacking r-cran-mime (0.12-2) ... 225s Selecting previously unselected package r-cran-sys. 225s Preparing to unpack .../119-r-cran-sys_3.4.3-1_amd64.deb ... 225s Unpacking r-cran-sys (3.4.3-1) ... 225s Selecting previously unselected package r-cran-askpass. 225s Preparing to unpack .../120-r-cran-askpass_1.2.1-1_amd64.deb ... 225s Unpacking r-cran-askpass (1.2.1-1) ... 225s Selecting previously unselected package r-cran-openssl. 225s Preparing to unpack .../121-r-cran-openssl_2.2.0+dfsg-1_amd64.deb ... 225s Unpacking r-cran-openssl (2.2.0+dfsg-1) ... 225s Selecting previously unselected package r-cran-r6. 225s Preparing to unpack .../122-r-cran-r6_2.5.1-1_all.deb ... 225s Unpacking r-cran-r6 (2.5.1-1) ... 225s Selecting previously unselected package r-cran-httr. 225s Preparing to unpack .../123-r-cran-httr_1.4.7+dfsg-1_all.deb ... 225s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 225s Selecting previously unselected package r-bioc-ucsc.utils. 225s Preparing to unpack .../124-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 225s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 225s Selecting previously unselected package r-bioc-genomeinfodbdata. 225s Preparing to unpack .../125-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 225s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 225s Selecting previously unselected package r-bioc-genomeinfodb. 225s Preparing to unpack .../126-r-bioc-genomeinfodb_1.42.1+dfsg-2_all.deb ... 225s Unpacking r-bioc-genomeinfodb (1.42.1+dfsg-2) ... 225s Selecting previously unselected package r-cran-crayon. 225s Preparing to unpack .../127-r-cran-crayon_1.5.2-1_all.deb ... 225s Unpacking r-cran-crayon (1.5.2-1) ... 225s Selecting previously unselected package r-bioc-biostrings. 225s Preparing to unpack .../128-r-bioc-biostrings_2.74.1+dfsg-2_amd64.deb ... 225s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 225s Selecting previously unselected package r-cran-lattice. 225s Preparing to unpack .../129-r-cran-lattice_0.22-6-1_amd64.deb ... 225s Unpacking r-cran-lattice (0.22-6-1) ... 225s Selecting previously unselected package r-cran-matrix. 225s Preparing to unpack .../130-r-cran-matrix_1.7-1-1_amd64.deb ... 225s Unpacking r-cran-matrix (1.7-1-1) ... 225s Selecting previously unselected package r-cran-matrixstats. 226s Preparing to unpack .../131-r-cran-matrixstats_1.4.1-1_amd64.deb ... 226s Unpacking r-cran-matrixstats (1.4.1-1) ... 226s Selecting previously unselected package r-bioc-matrixgenerics. 226s Preparing to unpack .../132-r-bioc-matrixgenerics_1.18.0-2_all.deb ... 226s Unpacking r-bioc-matrixgenerics (1.18.0-2) ... 226s Selecting previously unselected package r-cran-abind. 226s Preparing to unpack .../133-r-cran-abind_1.4-8-1_all.deb ... 226s Unpacking r-cran-abind (1.4-8-1) ... 226s Selecting previously unselected package r-bioc-s4arrays. 226s Preparing to unpack .../134-r-bioc-s4arrays_1.6.0+dfsg-2_amd64.deb ... 226s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 226s Selecting previously unselected package r-bioc-sparsearray. 226s Preparing to unpack .../135-r-bioc-sparsearray_1.6.0+dfsg-2_amd64.deb ... 226s Unpacking r-bioc-sparsearray (1.6.0+dfsg-2) ... 226s Selecting previously unselected package r-bioc-delayedarray. 226s Preparing to unpack .../136-r-bioc-delayedarray_0.32.0+dfsg-2_amd64.deb ... 226s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 226s Selecting previously unselected package r-bioc-genomicranges. 226s Preparing to unpack .../137-r-bioc-genomicranges_1.58.0+dfsg-2_amd64.deb ... 226s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 226s Selecting previously unselected package r-bioc-summarizedexperiment. 226s Preparing to unpack .../138-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 226s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 226s Selecting previously unselected package r-cran-locfit. 226s Preparing to unpack .../139-r-cran-locfit_1.5-9.10-1_amd64.deb ... 226s Unpacking r-cran-locfit (1.5-9.10-1) ... 226s Selecting previously unselected package r-cran-cli. 226s Preparing to unpack .../140-r-cran-cli_3.6.3-1_amd64.deb ... 226s Unpacking r-cran-cli (3.6.3-1) ... 226s Selecting previously unselected package r-cran-glue. 226s Preparing to unpack .../141-r-cran-glue_1.8.0-1_amd64.deb ... 226s Unpacking r-cran-glue (1.8.0-1) ... 226s Selecting previously unselected package r-cran-rlang. 226s Preparing to unpack .../142-r-cran-rlang_1.1.4-1_amd64.deb ... 226s Unpacking r-cran-rlang (1.1.4-1) ... 226s Selecting previously unselected package r-cran-lifecycle. 226s Preparing to unpack .../143-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 226s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 226s Selecting previously unselected package r-cran-gtable. 226s Preparing to unpack .../144-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 226s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 226s Selecting previously unselected package r-cran-isoband. 226s Preparing to unpack .../145-r-cran-isoband_0.2.7-1_amd64.deb ... 226s Unpacking r-cran-isoband (0.2.7-1) ... 226s Selecting previously unselected package r-cran-mass. 226s Preparing to unpack .../146-r-cran-mass_7.3-64-1_amd64.deb ... 226s Unpacking r-cran-mass (7.3-64-1) ... 226s Selecting previously unselected package r-cran-nlme. 226s Preparing to unpack .../147-r-cran-nlme_3.1.166-1_amd64.deb ... 226s Unpacking r-cran-nlme (3.1.166-1) ... 226s Selecting previously unselected package r-cran-mgcv. 226s Preparing to unpack .../148-r-cran-mgcv_1.9-1-1_amd64.deb ... 226s Unpacking r-cran-mgcv (1.9-1-1) ... 226s Selecting previously unselected package r-cran-farver. 226s Preparing to unpack .../149-r-cran-farver_2.1.2-1_amd64.deb ... 226s Unpacking r-cran-farver (2.1.2-1) ... 226s Selecting previously unselected package r-cran-labeling. 226s Preparing to unpack .../150-r-cran-labeling_0.4.3-1_all.deb ... 226s Unpacking r-cran-labeling (0.4.3-1) ... 226s Selecting previously unselected package r-cran-colorspace. 226s Preparing to unpack .../151-r-cran-colorspace_2.1-1+dfsg-1_amd64.deb ... 226s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 227s Selecting previously unselected package r-cran-munsell. 227s Preparing to unpack .../152-r-cran-munsell_0.5.1-1_all.deb ... 227s Unpacking r-cran-munsell (0.5.1-1) ... 227s Selecting previously unselected package r-cran-rcolorbrewer. 227s Preparing to unpack .../153-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 227s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 227s Selecting previously unselected package r-cran-viridislite. 227s Preparing to unpack .../154-r-cran-viridislite_0.4.2-2_all.deb ... 227s Unpacking r-cran-viridislite (0.4.2-2) ... 227s Selecting previously unselected package r-cran-scales. 227s Preparing to unpack .../155-r-cran-scales_1.3.0-1_all.deb ... 227s Unpacking r-cran-scales (1.3.0-1) ... 227s Selecting previously unselected package r-cran-fansi. 227s Preparing to unpack .../156-r-cran-fansi_1.0.5-1_amd64.deb ... 227s Unpacking r-cran-fansi (1.0.5-1) ... 227s Selecting previously unselected package r-cran-magrittr. 227s Preparing to unpack .../157-r-cran-magrittr_2.0.3-1_amd64.deb ... 227s Unpacking r-cran-magrittr (2.0.3-1) ... 227s Selecting previously unselected package r-cran-utf8. 227s Preparing to unpack .../158-r-cran-utf8_1.2.4-1_amd64.deb ... 227s Unpacking r-cran-utf8 (1.2.4-1) ... 227s Selecting previously unselected package r-cran-vctrs. 227s Preparing to unpack .../159-r-cran-vctrs_0.6.5-1_amd64.deb ... 227s Unpacking r-cran-vctrs (0.6.5-1) ... 227s Selecting previously unselected package r-cran-pillar. 227s Preparing to unpack .../160-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 227s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 227s Selecting previously unselected package r-cran-pkgconfig. 227s Preparing to unpack .../161-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 227s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 227s Selecting previously unselected package r-cran-tibble. 227s Preparing to unpack .../162-r-cran-tibble_3.2.1+dfsg-2_amd64.deb ... 227s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 227s Selecting previously unselected package r-cran-withr. 227s Preparing to unpack .../163-r-cran-withr_3.0.2+dfsg-1_all.deb ... 227s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 227s Selecting previously unselected package r-cran-ggplot2. 227s Preparing to unpack .../164-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 227s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 227s Selecting previously unselected package r-cran-pkgkitten. 227s Preparing to unpack .../165-r-cran-pkgkitten_0.2.4-1_all.deb ... 227s Unpacking r-cran-pkgkitten (0.2.4-1) ... 227s Selecting previously unselected package r-cran-rcpp. 227s Preparing to unpack .../166-r-cran-rcpp_1.0.14-1_amd64.deb ... 227s Unpacking r-cran-rcpp (1.0.14-1) ... 228s Selecting previously unselected package r-cran-rcpparmadillo. 228s Preparing to unpack .../167-r-cran-rcpparmadillo_14.2.2-1-1_amd64.deb ... 228s Unpacking r-cran-rcpparmadillo (14.2.2-1-1) ... 228s Selecting previously unselected package r-bioc-deseq2. 228s Preparing to unpack .../168-r-bioc-deseq2_1.46.0+dfsg-2_amd64.deb ... 228s Unpacking r-bioc-deseq2 (1.46.0+dfsg-2) ... 228s Selecting previously unselected package r-bioc-rhtslib. 228s Preparing to unpack .../169-r-bioc-rhtslib_3.2.0+dfsg-2_amd64.deb ... 228s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 228s Selecting previously unselected package r-bioc-rsamtools. 228s Preparing to unpack .../170-r-bioc-rsamtools_2.22.0+dfsg-2_amd64.deb ... 228s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 228s Selecting previously unselected package r-bioc-genomicalignments. 228s Preparing to unpack .../171-r-bioc-genomicalignments_1.42.0-2_amd64.deb ... 228s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 228s Selecting previously unselected package r-bioc-hsmmsinglecell. 228s Preparing to unpack .../172-r-bioc-hsmmsinglecell_1.26.0-2_all.deb ... 228s Unpacking r-bioc-hsmmsinglecell (1.26.0-2) ... 228s Selecting previously unselected package r-cran-statmod. 228s Preparing to unpack .../173-r-cran-statmod_1.5.0-1_amd64.deb ... 228s Unpacking r-cran-statmod (1.5.0-1) ... 228s Selecting previously unselected package r-bioc-limma. 228s Preparing to unpack .../174-r-bioc-limma_3.62.2+dfsg-1_amd64.deb ... 228s Unpacking r-bioc-limma (3.62.2+dfsg-1) ... 228s Selecting previously unselected package r-cran-vgam. 228s Preparing to unpack .../175-r-cran-vgam_1.1-11-1_amd64.deb ... 228s Unpacking r-cran-vgam (1.1-11-1) ... 228s Selecting previously unselected package r-cran-irlba. 228s Preparing to unpack .../176-r-cran-irlba_2.3.5.1-4_amd64.deb ... 228s Unpacking r-cran-irlba (2.3.5.1-4) ... 228s Selecting previously unselected package r-cran-rcppeigen. 228s Preparing to unpack .../177-r-cran-rcppeigen_0.3.4.0.2-1_amd64.deb ... 228s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 228s Selecting previously unselected package r-cran-ddrtree. 228s Preparing to unpack .../178-r-cran-ddrtree_0.1.5-2_amd64.deb ... 228s Unpacking r-cran-ddrtree (0.1.5-2) ... 228s Selecting previously unselected package r-cran-igraph. 228s Preparing to unpack .../179-r-cran-igraph_2.0.3-1_amd64.deb ... 228s Unpacking r-cran-igraph (2.0.3-1) ... 229s Selecting previously unselected package r-cran-plyr. 229s Preparing to unpack .../180-r-cran-plyr_1.8.9-1_amd64.deb ... 229s Unpacking r-cran-plyr (1.8.9-1) ... 229s Selecting previously unselected package r-cran-cluster. 229s Preparing to unpack .../181-r-cran-cluster_2.1.8-1_amd64.deb ... 229s Unpacking r-cran-cluster (2.1.8-1) ... 229s Selecting previously unselected package r-cran-combinat. 229s Preparing to unpack .../182-r-cran-combinat_0.0-8-7build1_all.deb ... 229s Unpacking r-cran-combinat (0.0-8-7build1) ... 229s Selecting previously unselected package r-cran-fastica. 229s Preparing to unpack .../183-r-cran-fastica_1.2-7-1_amd64.deb ... 229s Unpacking r-cran-fastica (1.2-7-1) ... 229s Selecting previously unselected package r-cran-rtsne. 229s Preparing to unpack .../184-r-cran-rtsne_0.17-1_amd64.deb ... 229s Unpacking r-cran-rtsne (0.17-1) ... 229s Selecting previously unselected package r-cran-stringi. 229s Preparing to unpack .../185-r-cran-stringi_1.8.4-1build1_amd64.deb ... 229s Unpacking r-cran-stringi (1.8.4-1build1) ... 229s Selecting previously unselected package r-cran-stringr. 229s Preparing to unpack .../186-r-cran-stringr_1.5.1-1_all.deb ... 229s Unpacking r-cran-stringr (1.5.1-1) ... 229s Selecting previously unselected package r-cran-reshape2. 229s Preparing to unpack .../187-r-cran-reshape2_1.4.4-2build1_amd64.deb ... 229s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 229s Selecting previously unselected package r-cran-leidenbase. 229s Preparing to unpack .../188-r-cran-leidenbase_0.1.27-1_amd64.deb ... 229s Unpacking r-cran-leidenbase (0.1.27-1) ... 229s Selecting previously unselected package r-cran-generics. 229s Preparing to unpack .../189-r-cran-generics_0.1.3-1_all.deb ... 229s Unpacking r-cran-generics (0.1.3-1) ... 229s Selecting previously unselected package r-cran-tidyselect. 229s Preparing to unpack .../190-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ... 229s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 229s Selecting previously unselected package r-cran-dplyr. 229s Preparing to unpack .../191-r-cran-dplyr_1.1.4-4_amd64.deb ... 229s Unpacking r-cran-dplyr (1.1.4-4) ... 229s Selecting previously unselected package r-cran-pheatmap. 229s Preparing to unpack .../192-r-cran-pheatmap_1.0.12-2build1_all.deb ... 229s Unpacking r-cran-pheatmap (1.0.12-2build1) ... 229s Selecting previously unselected package r-cran-proxy. 229s Preparing to unpack .../193-r-cran-proxy_0.4-27-1_amd64.deb ... 229s Unpacking r-cran-proxy (0.4-27-1) ... 229s Selecting previously unselected package r-cran-slam. 229s Preparing to unpack .../194-r-cran-slam_0.1-55-1_amd64.deb ... 229s Unpacking r-cran-slam (0.1-55-1) ... 229s Selecting previously unselected package r-cran-gridextra. 229s Preparing to unpack .../195-r-cran-gridextra_2.3-3build1_all.deb ... 229s Unpacking r-cran-gridextra (2.3-3build1) ... 229s Selecting previously unselected package r-cran-viridis. 229s Preparing to unpack .../196-r-cran-viridis_0.6.5-1_all.deb ... 229s Unpacking r-cran-viridis (0.6.5-1) ... 229s Selecting previously unselected package r-cran-rann. 229s Preparing to unpack .../197-r-cran-rann_2.6.2-1_amd64.deb ... 229s Unpacking r-cran-rann (2.6.2-1) ... 229s Selecting previously unselected package r-bioc-monocle. 229s Preparing to unpack .../198-r-bioc-monocle_2.34.0-2_amd64.deb ... 229s Unpacking r-bioc-monocle (2.34.0-2) ... 229s Selecting previously unselected package r-cran-survival. 229s Preparing to unpack .../199-r-cran-survival_3.8-3-1_amd64.deb ... 229s Unpacking r-cran-survival (3.8-3-1) ... 229s Selecting previously unselected package r-bioc-multtest. 229s Preparing to unpack .../200-r-bioc-multtest_2.62.0-2_amd64.deb ... 229s Unpacking r-bioc-multtest (2.62.0-2) ... 229s Selecting previously unselected package r-cran-rjson. 229s Preparing to unpack .../201-r-cran-rjson_0.2.23-1_amd64.deb ... 229s Unpacking r-cran-rjson (0.2.23-1) ... 229s Selecting previously unselected package r-cran-yaml. 229s Preparing to unpack .../202-r-cran-yaml_2.3.10-1_amd64.deb ... 229s Unpacking r-cran-yaml (2.3.10-1) ... 229s Selecting previously unselected package r-cran-restfulr. 229s Preparing to unpack .../203-r-cran-restfulr_0.0.15-1_amd64.deb ... 229s Unpacking r-cran-restfulr (0.0.15-1) ... 229s Selecting previously unselected package r-bioc-rtracklayer. 229s Preparing to unpack .../204-r-bioc-rtracklayer_1.66.0-2_amd64.deb ... 229s Unpacking r-bioc-rtracklayer (1.66.0-2) ... 230s Selecting previously unselected package r-bioc-singlecellexperiment. 230s Preparing to unpack .../205-r-bioc-singlecellexperiment_1.28.1+ds-2_all.deb ... 230s Unpacking r-bioc-singlecellexperiment (1.28.1+ds-2) ... 230s Selecting previously unselected package r-cran-digest. 230s Preparing to unpack .../206-r-cran-digest_0.6.37-1_amd64.deb ... 230s Unpacking r-cran-digest (0.6.37-1) ... 230s Selecting previously unselected package r-cran-ape. 230s Preparing to unpack .../207-r-cran-ape_5.8-1_amd64.deb ... 230s Unpacking r-cran-ape (5.8-1) ... 230s Selecting previously unselected package r-cran-base64enc. 230s Preparing to unpack .../208-r-cran-base64enc_0.1-3-3_amd64.deb ... 230s Unpacking r-cran-base64enc (0.1-3-3) ... 230s Selecting previously unselected package r-cran-beeswarm. 230s Preparing to unpack .../209-r-cran-beeswarm_0.4.0-1_amd64.deb ... 230s Unpacking r-cran-beeswarm (0.4.0-1) ... 230s Selecting previously unselected package r-cran-bit. 230s Preparing to unpack .../210-r-cran-bit_4.0.5-1_amd64.deb ... 230s Unpacking r-cran-bit (4.0.5-1) ... 230s Selecting previously unselected package r-cran-bit64. 230s Preparing to unpack .../211-r-cran-bit64_4.0.5-1_amd64.deb ... 230s Unpacking r-cran-bit64 (4.0.5-1) ... 230s Selecting previously unselected package r-cran-brio. 230s Preparing to unpack .../212-r-cran-brio_1.1.5-1_amd64.deb ... 230s Unpacking r-cran-brio (1.1.5-1) ... 230s Selecting previously unselected package r-cran-fastmap. 230s Preparing to unpack .../213-r-cran-fastmap_1.2.0-1_amd64.deb ... 230s Unpacking r-cran-fastmap (1.2.0-1) ... 230s Selecting previously unselected package r-cran-cachem. 230s Preparing to unpack .../214-r-cran-cachem_1.1.0-1_amd64.deb ... 230s Unpacking r-cran-cachem (1.1.0-1) ... 230s Selecting previously unselected package r-cran-htmltools. 230s Preparing to unpack .../215-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 230s Unpacking r-cran-htmltools (0.5.8.1-1) ... 230s Selecting previously unselected package r-cran-jquerylib. 230s Preparing to unpack .../216-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 230s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 230s Selecting previously unselected package r-cran-memoise. 230s Preparing to unpack .../217-r-cran-memoise_2.0.1-1_all.deb ... 230s Unpacking r-cran-memoise (2.0.1-1) ... 230s Selecting previously unselected package r-cran-fs. 230s Preparing to unpack .../218-r-cran-fs_1.6.4+dfsg-1_amd64.deb ... 230s Unpacking r-cran-fs (1.6.4+dfsg-1) ... 230s Selecting previously unselected package r-cran-rappdirs. 230s Preparing to unpack .../219-r-cran-rappdirs_0.3.3-1_amd64.deb ... 230s Unpacking r-cran-rappdirs (0.3.3-1) ... 230s Selecting previously unselected package r-cran-sass. 230s Preparing to unpack .../220-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 230s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 230s Selecting previously unselected package r-cran-bslib. 230s Preparing to unpack .../221-r-cran-bslib_0.7.0+dfsg-1_all.deb ... 230s Unpacking r-cran-bslib (0.7.0+dfsg-1) ... 230s Selecting previously unselected package r-cran-cairo. 230s Preparing to unpack .../222-r-cran-cairo_1.6-2-1_amd64.deb ... 230s Unpacking r-cran-cairo (1.6-2-1) ... 230s Selecting previously unselected package r-cran-ps. 230s Preparing to unpack .../223-r-cran-ps_1.8.0-1_amd64.deb ... 230s Unpacking r-cran-ps (1.8.0-1) ... 230s Selecting previously unselected package r-cran-processx. 230s Preparing to unpack .../224-r-cran-processx_3.8.4-1_amd64.deb ... 230s Unpacking r-cran-processx (3.8.4-1) ... 230s Selecting previously unselected package r-cran-callr. 230s Preparing to unpack .../225-r-cran-callr_3.7.6-1_all.deb ... 230s Unpacking r-cran-callr (3.7.6-1) ... 230s Selecting previously unselected package r-cran-class. 230s Preparing to unpack .../226-r-cran-class_7.3-23-1_amd64.deb ... 230s Unpacking r-cran-class (7.3-23-1) ... 230s Selecting previously unselected package r-cran-e1071. 230s Preparing to unpack .../227-r-cran-e1071_1.7-16-1_amd64.deb ... 230s Unpacking r-cran-e1071 (1.7-16-1) ... 230s Selecting previously unselected package r-cran-iterators. 230s Preparing to unpack .../228-r-cran-iterators_1.0.14-1_all.deb ... 230s Unpacking r-cran-iterators (1.0.14-1) ... 230s Selecting previously unselected package r-cran-foreach. 230s Preparing to unpack .../229-r-cran-foreach_1.5.2-1_all.deb ... 230s Unpacking r-cran-foreach (1.5.2-1) ... 231s Selecting previously unselected package r-cran-data.table. 231s Preparing to unpack .../230-r-cran-data.table_1.16.4+dfsg-1_amd64.deb ... 231s Unpacking r-cran-data.table (1.16.4+dfsg-1) ... 231s Selecting previously unselected package r-cran-modelmetrics. 231s Preparing to unpack .../231-r-cran-modelmetrics_1.2.2.2-1build1_amd64.deb ... 231s Unpacking r-cran-modelmetrics (1.2.2.2-1build1) ... 231s Selecting previously unselected package r-cran-proc. 231s Preparing to unpack .../232-r-cran-proc_1.18.5-1_amd64.deb ... 231s Unpacking r-cran-proc (1.18.5-1) ... 231s Selecting previously unselected package r-cran-tzdb. 231s Preparing to unpack .../233-r-cran-tzdb_0.4.0-2_amd64.deb ... 231s Unpacking r-cran-tzdb (0.4.0-2) ... 231s Selecting previously unselected package r-cran-clock. 231s Preparing to unpack .../234-r-cran-clock_0.7.1-1_amd64.deb ... 231s Unpacking r-cran-clock (0.7.1-1) ... 231s Selecting previously unselected package r-cran-gower. 231s Preparing to unpack .../235-r-cran-gower_1.0.1-1_amd64.deb ... 231s Unpacking r-cran-gower (1.0.1-1) ... 231s Selecting previously unselected package r-cran-hardhat. 231s Preparing to unpack .../236-r-cran-hardhat_1.4.0+dfsg-1_all.deb ... 231s Unpacking r-cran-hardhat (1.4.0+dfsg-1) ... 231s Selecting previously unselected package r-cran-rpart. 231s Preparing to unpack .../237-r-cran-rpart_4.1.24-1_amd64.deb ... 231s Unpacking r-cran-rpart (4.1.24-1) ... 231s Selecting previously unselected package r-cran-nnet. 231s Preparing to unpack .../238-r-cran-nnet_7.3-20-1_amd64.deb ... 231s Unpacking r-cran-nnet (7.3-20-1) ... 231s Selecting previously unselected package r-cran-shape. 231s Preparing to unpack .../239-r-cran-shape_1.4.6.1-1_all.deb ... 231s Unpacking r-cran-shape (1.4.6.1-1) ... 231s Selecting previously unselected package r-cran-diagram. 231s Preparing to unpack .../240-r-cran-diagram_1.6.5-2_all.deb ... 231s Unpacking r-cran-diagram (1.6.5-2) ... 231s Selecting previously unselected package r-cran-kernsmooth. 231s Preparing to unpack .../241-r-cran-kernsmooth_2.23-26-1_amd64.deb ... 231s Unpacking r-cran-kernsmooth (2.23-26-1) ... 231s Selecting previously unselected package r-cran-globals. 231s Preparing to unpack .../242-r-cran-globals_0.16.3-1_all.deb ... 231s Unpacking r-cran-globals (0.16.3-1) ... 231s Selecting previously unselected package r-cran-listenv. 231s Preparing to unpack .../243-r-cran-listenv_0.9.1+dfsg-1_all.deb ... 231s Unpacking r-cran-listenv (0.9.1+dfsg-1) ... 231s Selecting previously unselected package r-cran-parallelly. 231s Preparing to unpack .../244-r-cran-parallelly_1.38.0-1_amd64.deb ... 231s Unpacking r-cran-parallelly (1.38.0-1) ... 231s Selecting previously unselected package r-cran-future. 231s Preparing to unpack .../245-r-cran-future_1.34.0+dfsg-1_all.deb ... 231s Unpacking r-cran-future (1.34.0+dfsg-1) ... 231s Selecting previously unselected package r-cran-future.apply. 231s Preparing to unpack .../246-r-cran-future.apply_1.11.2+dfsg-1_all.deb ... 231s Unpacking r-cran-future.apply (1.11.2+dfsg-1) ... 231s Selecting previously unselected package r-cran-numderiv. 231s Preparing to unpack .../247-r-cran-numderiv_2016.8-1.1-3_all.deb ... 231s Unpacking r-cran-numderiv (2016.8-1.1-3) ... 231s Selecting previously unselected package r-cran-progressr. 231s Preparing to unpack .../248-r-cran-progressr_0.14.0-1_all.deb ... 231s Unpacking r-cran-progressr (0.14.0-1) ... 231s Selecting previously unselected package r-cran-squarem. 231s Preparing to unpack .../249-r-cran-squarem_2021.1-1_all.deb ... 231s Unpacking r-cran-squarem (2021.1-1) ... 231s Selecting previously unselected package r-cran-lava. 232s Preparing to unpack .../250-r-cran-lava_1.7.3+dfsg-1_all.deb ... 232s Unpacking r-cran-lava (1.7.3+dfsg-1) ... 232s Selecting previously unselected package r-cran-prodlim. 232s Preparing to unpack .../251-r-cran-prodlim_2024.06.25-1_amd64.deb ... 232s Unpacking r-cran-prodlim (2024.06.25-1) ... 232s Selecting previously unselected package r-cran-ipred. 232s Preparing to unpack .../252-r-cran-ipred_0.9-15-1_amd64.deb ... 232s Unpacking r-cran-ipred (0.9-15-1) ... 232s Selecting previously unselected package r-cran-timechange. 232s Preparing to unpack .../253-r-cran-timechange_0.3.0-1_amd64.deb ... 232s Unpacking r-cran-timechange (0.3.0-1) ... 232s Selecting previously unselected package r-cran-lubridate. 232s Preparing to unpack .../254-r-cran-lubridate_1.9.3+dfsg-1_amd64.deb ... 232s Unpacking r-cran-lubridate (1.9.3+dfsg-1) ... 232s Selecting previously unselected package r-cran-purrr. 232s Preparing to unpack .../255-r-cran-purrr_1.0.2-1_amd64.deb ... 232s Unpacking r-cran-purrr (1.0.2-1) ... 232s Selecting previously unselected package r-cran-tidyr. 232s Preparing to unpack .../256-r-cran-tidyr_1.3.1-1_amd64.deb ... 232s Unpacking r-cran-tidyr (1.3.1-1) ... 232s Selecting previously unselected package r-cran-timedate. 232s Preparing to unpack .../257-r-cran-timedate_4041.110-1_amd64.deb ... 232s Unpacking r-cran-timedate (4041.110-1) ... 232s Selecting previously unselected package r-cran-recipes. 232s Preparing to unpack .../258-r-cran-recipes_1.1.0+dfsg-1_all.deb ... 232s Unpacking r-cran-recipes (1.1.0+dfsg-1) ... 232s Selecting previously unselected package r-cran-caret. 232s Preparing to unpack .../259-r-cran-caret_6.0-94+dfsg-1_amd64.deb ... 232s Unpacking r-cran-caret (6.0-94+dfsg-1) ... 232s Selecting previously unselected package r-cran-catools. 232s Preparing to unpack .../260-r-cran-catools_1.18.2-1_amd64.deb ... 232s Unpacking r-cran-catools (1.18.2-1) ... 232s Selecting previously unselected package r-cran-evaluate. 232s Preparing to unpack .../261-r-cran-evaluate_1.0.0-1_all.deb ... 232s Unpacking r-cran-evaluate (1.0.0-1) ... 232s Selecting previously unselected package r-cran-xfun. 232s Preparing to unpack .../262-r-cran-xfun_0.49+dfsg-1_amd64.deb ... 232s Unpacking r-cran-xfun (0.49+dfsg-1) ... 232s Selecting previously unselected package r-cran-highr. 232s Preparing to unpack .../263-r-cran-highr_0.11+dfsg-1_all.deb ... 232s Unpacking r-cran-highr (0.11+dfsg-1) ... 232s Selecting previously unselected package libjs-mathjax. 232s Preparing to unpack .../264-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 232s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 233s Selecting previously unselected package r-cran-knitr. 233s Preparing to unpack .../265-r-cran-knitr_1.49+dfsg-1_all.deb ... 233s Unpacking r-cran-knitr (1.49+dfsg-1) ... 233s Selecting previously unselected package r-cran-fontawesome. 233s Preparing to unpack .../266-r-cran-fontawesome_0.5.2-1_all.deb ... 233s Unpacking r-cran-fontawesome (0.5.2-1) ... 233s Selecting previously unselected package r-cran-tinytex. 233s Preparing to unpack .../267-r-cran-tinytex_0.53-1_all.deb ... 233s Unpacking r-cran-tinytex (0.53-1) ... 233s Selecting previously unselected package libjs-modernizr. 233s Preparing to unpack .../268-libjs-modernizr_3.13.0-0.1_all.deb ... 233s Unpacking libjs-modernizr (3.13.0-0.1) ... 233s Selecting previously unselected package r-cran-later. 233s Preparing to unpack .../269-r-cran-later_1.3.2+dfsg-1_amd64.deb ... 233s Unpacking r-cran-later (1.3.2+dfsg-1) ... 233s Selecting previously unselected package r-cran-promises. 233s Preparing to unpack .../270-r-cran-promises_1.3.0+dfsg-1_amd64.deb ... 233s Unpacking r-cran-promises (1.3.0+dfsg-1) ... 233s Selecting previously unselected package r-cran-httpuv. 233s Preparing to unpack .../271-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 233s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 233s Selecting previously unselected package r-cran-xtable. 233s Preparing to unpack .../272-r-cran-xtable_1%3a1.8-4-2_all.deb ... 233s Unpacking r-cran-xtable (1:1.8-4-2) ... 233s Selecting previously unselected package r-cran-sourcetools. 233s Preparing to unpack .../273-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 233s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 233s Selecting previously unselected package r-cran-commonmark. 233s Preparing to unpack .../274-r-cran-commonmark_1.9.2-2_amd64.deb ... 233s Unpacking r-cran-commonmark (1.9.2-2) ... 233s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 233s Preparing to unpack .../275-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 233s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 233s Selecting previously unselected package r-cran-shiny. 233s Preparing to unpack .../276-r-cran-shiny_1.9.1+dfsg-1_all.deb ... 233s Unpacking r-cran-shiny (1.9.1+dfsg-1) ... 234s Selecting previously unselected package r-cran-rmarkdown. 234s Preparing to unpack .../277-r-cran-rmarkdown_2.28+dfsg-1_all.deb ... 234s Unpacking r-cran-rmarkdown (2.28+dfsg-1) ... 234s Selecting previously unselected package r-cran-htmlwidgets. 234s Preparing to unpack .../278-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 234s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 234s Selecting previously unselected package r-cran-miniui. 234s Preparing to unpack .../279-r-cran-miniui_0.1.1.1-3build1_all.deb ... 234s Unpacking r-cran-miniui (0.1.1.1-3build1) ... 234s Selecting previously unselected package r-cran-shinyjs. 234s Preparing to unpack .../280-r-cran-shinyjs_2.1.0-1_all.deb ... 234s Unpacking r-cran-shinyjs (2.1.0-1) ... 234s Selecting previously unselected package r-cran-colourpicker. 234s Preparing to unpack .../281-r-cran-colourpicker_1.3.0+dfsg-1_all.deb ... 234s Unpacking r-cran-colourpicker (1.3.0+dfsg-1) ... 234s Selecting previously unselected package r-cran-conquer. 234s Preparing to unpack .../282-r-cran-conquer_1.3.3-1_amd64.deb ... 234s Unpacking r-cran-conquer (1.3.3-1) ... 234s Selecting previously unselected package r-cran-cowplot. 234s Preparing to unpack .../283-r-cran-cowplot_1.1.3+dfsg-1_all.deb ... 234s Unpacking r-cran-cowplot (1.1.3+dfsg-1) ... 234s Selecting previously unselected package r-cran-lazyeval. 234s Preparing to unpack .../284-r-cran-lazyeval_0.2.2-1build1_amd64.deb ... 234s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 234s Selecting previously unselected package r-cran-crosstalk. 234s Preparing to unpack .../285-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 234s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 234s Selecting previously unselected package r-cran-deldir. 234s Preparing to unpack .../286-r-cran-deldir_2.0-4-1build1_amd64.deb ... 234s Unpacking r-cran-deldir (2.0-4-1build1) ... 234s Selecting previously unselected package r-cran-deoptimr. 234s Preparing to unpack .../287-r-cran-deoptimr_1.1-3-1-1_all.deb ... 234s Unpacking r-cran-deoptimr (1.1-3-1-1) ... 234s Selecting previously unselected package r-cran-desc. 234s Preparing to unpack .../288-r-cran-desc_1.4.3-1_all.deb ... 234s Unpacking r-cran-desc (1.4.3-1) ... 234s Selecting previously unselected package r-cran-diffobj. 234s Preparing to unpack .../289-r-cran-diffobj_0.3.5-1_amd64.deb ... 234s Unpacking r-cran-diffobj (0.3.5-1) ... 234s Selecting previously unselected package r-cran-dotcall64. 234s Preparing to unpack .../290-r-cran-dotcall64_1.1-1-1_amd64.deb ... 234s Unpacking r-cran-dotcall64 (1.1-1-1) ... 234s Selecting previously unselected package r-cran-sitmo. 234s Preparing to unpack .../291-r-cran-sitmo_2.0.2-1_amd64.deb ... 234s Unpacking r-cran-sitmo (2.0.2-1) ... 234s Selecting previously unselected package r-cran-dqrng. 234s Preparing to unpack .../292-r-cran-dqrng_0.3.2+dfsg-1_amd64.deb ... 234s Unpacking r-cran-dqrng (0.3.2+dfsg-1) ... 234s Selecting previously unselected package r-cran-fastdummies. 234s Preparing to unpack .../293-r-cran-fastdummies_1.7.4-1_all.deb ... 234s Unpacking r-cran-fastdummies (1.7.4-1) ... 234s Selecting previously unselected package r-cran-fitdistrplus. 234s Preparing to unpack .../294-r-cran-fitdistrplus_1.2-1-1_all.deb ... 234s Unpacking r-cran-fitdistrplus (1.2-1-1) ... 234s Selecting previously unselected package r-cran-fnn. 234s Preparing to unpack .../295-r-cran-fnn_1.1.4.1-1_amd64.deb ... 234s Unpacking r-cran-fnn (1.1.4.1-1) ... 234s Selecting previously unselected package r-cran-gtools. 234s Preparing to unpack .../296-r-cran-gtools_3.9.5-1_amd64.deb ... 234s Unpacking r-cran-gtools (3.9.5-1) ... 234s Selecting previously unselected package r-cran-gdata. 234s Preparing to unpack .../297-r-cran-gdata_3.0.1-1_all.deb ... 234s Unpacking r-cran-gdata (3.0.1-1) ... 234s Selecting previously unselected package r-cran-vipor. 234s Preparing to unpack .../298-r-cran-vipor_0.4.7-1_all.deb ... 234s Unpacking r-cran-vipor (0.4.7-1) ... 234s Selecting previously unselected package r-cran-ggbeeswarm. 234s Preparing to unpack .../299-r-cran-ggbeeswarm_0.7.2-1_all.deb ... 234s Unpacking r-cran-ggbeeswarm (0.7.2-1) ... 235s Selecting previously unselected package r-cran-png. 235s Preparing to unpack .../300-r-cran-png_0.1-8-1build2_amd64.deb ... 235s Unpacking r-cran-png (0.1-8-1build2) ... 235s Selecting previously unselected package r-cran-systemfonts. 235s Preparing to unpack .../301-r-cran-systemfonts_1.1.0-1_amd64.deb ... 235s Unpacking r-cran-systemfonts (1.1.0-1) ... 235s Selecting previously unselected package r-cran-textshaping. 235s Preparing to unpack .../302-r-cran-textshaping_0.3.7-2_amd64.deb ... 235s Unpacking r-cran-textshaping (0.3.7-2) ... 235s Selecting previously unselected package r-cran-ragg. 235s Preparing to unpack .../303-r-cran-ragg_1.3.3-1_amd64.deb ... 235s Unpacking r-cran-ragg (1.3.3-1) ... 235s Selecting previously unselected package r-cran-ggrastr. 235s Preparing to unpack .../304-r-cran-ggrastr_1.0.2-1_all.deb ... 235s Unpacking r-cran-ggrastr (1.0.2-1) ... 235s Selecting previously unselected package r-cran-ggrepel. 235s Preparing to unpack .../305-r-cran-ggrepel_0.9.5-2_amd64.deb ... 235s Unpacking r-cran-ggrepel (0.9.5-2) ... 235s Selecting previously unselected package r-cran-ggridges. 235s Preparing to unpack .../306-r-cran-ggridges_0.5.6-1_all.deb ... 235s Unpacking r-cran-ggridges (0.5.6-1) ... 235s Selecting previously unselected package r-cran-goftest. 235s Preparing to unpack .../307-r-cran-goftest_1.2-3-1_amd64.deb ... 235s Unpacking r-cran-goftest (1.2-3-1) ... 235s Selecting previously unselected package r-cran-gplots. 235s Preparing to unpack .../308-r-cran-gplots_3.2.0-1_all.deb ... 235s Unpacking r-cran-gplots (3.2.0-1) ... 235s Selecting previously unselected package r-cran-hdf5r. 235s Preparing to unpack .../309-r-cran-hdf5r_1.3.11+dfsg-1_amd64.deb ... 235s Unpacking r-cran-hdf5r (1.3.11+dfsg-1) ... 235s Selecting previously unselected package r-cran-rprojroot. 235s Preparing to unpack .../310-r-cran-rprojroot_2.0.4-1_all.deb ... 235s Unpacking r-cran-rprojroot (2.0.4-1) ... 235s Selecting previously unselected package r-cran-here. 235s Preparing to unpack .../311-r-cran-here_1.0.1-2_all.deb ... 235s Unpacking r-cran-here (1.0.1-2) ... 235s Selecting previously unselected package r-cran-ica. 235s Preparing to unpack .../312-r-cran-ica_1.0-3-1_all.deb ... 235s Unpacking r-cran-ica (1.0-3-1) ... 235s Selecting previously unselected package r-cran-kernlab. 235s Preparing to unpack .../313-r-cran-kernlab_0.9-33-1_amd64.deb ... 235s Unpacking r-cran-kernlab (0.9-33-1) ... 235s Selecting previously unselected package r-cran-rcpptoml. 235s Preparing to unpack .../314-r-cran-rcpptoml_0.2.2+dfsg-1_amd64.deb ... 235s Unpacking r-cran-rcpptoml (0.2.2+dfsg-1) ... 235s Selecting previously unselected package r-cran-reticulate. 235s Preparing to unpack .../315-r-cran-reticulate_1.39.0+dfsg-1_amd64.deb ... 235s Unpacking r-cran-reticulate (1.39.0+dfsg-1) ... 235s Selecting previously unselected package r-cran-leiden. 235s Preparing to unpack .../316-r-cran-leiden_0.4.3.1+dfsg-1_all.deb ... 235s Unpacking r-cran-leiden (0.4.3.1+dfsg-1) ... 235s Selecting previously unselected package r-cran-zoo. 235s Preparing to unpack .../317-r-cran-zoo_1.8-12-2_amd64.deb ... 235s Unpacking r-cran-zoo (1.8-12-2) ... 235s Selecting previously unselected package r-cran-lmtest. 235s Preparing to unpack .../318-r-cran-lmtest_0.9.40-1_amd64.deb ... 235s Unpacking r-cran-lmtest (0.9.40-1) ... 236s Selecting previously unselected package r-cran-mathjaxr. 236s Preparing to unpack .../319-r-cran-mathjaxr_1.6-0-1_all.deb ... 236s Unpacking r-cran-mathjaxr (1.6-0-1) ... 236s Selecting previously unselected package r-cran-matrixmodels. 236s Preparing to unpack .../320-r-cran-matrixmodels_0.5-3-1_all.deb ... 236s Unpacking r-cran-matrixmodels (0.5-3-1) ... 236s Selecting previously unselected package r-cran-rbibutils. 236s Preparing to unpack .../321-r-cran-rbibutils_2.3-1_amd64.deb ... 236s Unpacking r-cran-rbibutils (2.3-1) ... 236s Selecting previously unselected package r-cran-rdpack. 236s Preparing to unpack .../322-r-cran-rdpack_2.6.2-1_all.deb ... 236s Unpacking r-cran-rdpack (2.6.2-1) ... 236s Selecting previously unselected package r-cran-mnormt. 236s Preparing to unpack .../323-r-cran-mnormt_2.1.1-2_amd64.deb ... 236s Unpacking r-cran-mnormt (2.1.1-2) ... 236s Selecting previously unselected package r-cran-sparsem. 236s Preparing to unpack .../324-r-cran-sparsem_1.84-2-1_amd64.deb ... 236s Unpacking r-cran-sparsem (1.84-2-1) ... 236s Selecting previously unselected package r-cran-quantreg. 236s Preparing to unpack .../325-r-cran-quantreg_5.99.1-1_amd64.deb ... 236s Unpacking r-cran-quantreg (5.99.1-1) ... 236s Selecting previously unselected package r-cran-sn. 236s Preparing to unpack .../326-r-cran-sn_2.1.1-2_all.deb ... 236s Unpacking r-cran-sn (2.1.1-2) ... 236s Selecting previously unselected package r-cran-mvtnorm. 236s Preparing to unpack .../327-r-cran-mvtnorm_1.3-3-1_amd64.deb ... 236s Unpacking r-cran-mvtnorm (1.3-3-1) ... 236s Selecting previously unselected package r-cran-tfisher. 236s Preparing to unpack .../328-r-cran-tfisher_0.2.0-3_all.deb ... 236s Unpacking r-cran-tfisher (0.2.0-3) ... 236s Selecting previously unselected package r-cran-plotrix. 236s Preparing to unpack .../329-r-cran-plotrix_3.8-4-1_all.deb ... 236s Unpacking r-cran-plotrix (3.8-4-1) ... 236s Selecting previously unselected package r-cran-th.data. 236s Preparing to unpack .../330-r-cran-th.data_1.1-2-2_all.deb ... 236s Unpacking r-cran-th.data (1.1-2-2) ... 236s Selecting previously unselected package r-cran-sandwich. 236s Preparing to unpack .../331-r-cran-sandwich_3.1-1-1_all.deb ... 236s Unpacking r-cran-sandwich (3.1-1-1) ... 236s Selecting previously unselected package r-cran-multcomp. 236s Preparing to unpack .../332-r-cran-multcomp_1.4-26-2_all.deb ... 236s Unpacking r-cran-multcomp (1.4-26-2) ... 236s Selecting previously unselected package r-cran-mutoss. 236s Preparing to unpack .../333-r-cran-mutoss_0.1-13-1_all.deb ... 236s Unpacking r-cran-mutoss (0.1-13-1) ... 236s Selecting previously unselected package r-cran-robustbase. 236s Preparing to unpack .../334-r-cran-robustbase_0.99-4-1-1_amd64.deb ... 236s Unpacking r-cran-robustbase (0.99-4-1-1) ... 236s Selecting previously unselected package r-cran-qqconf. 236s Preparing to unpack .../335-r-cran-qqconf_1.3.2+dfsg-1_amd64.deb ... 236s Unpacking r-cran-qqconf (1.3.2+dfsg-1) ... 236s Selecting previously unselected package r-cran-metap. 236s Preparing to unpack .../336-r-cran-metap_1.11-1_all.deb ... 236s Unpacking r-cran-metap (1.11-1) ... 236s Selecting previously unselected package r-cran-plotly. 236s Preparing to unpack .../337-r-cran-plotly_4.10.4+dfsg-2_all.deb ... 236s Unpacking r-cran-plotly (4.10.4+dfsg-2) ... 237s Selecting previously unselected package r-cran-segmented. 237s Preparing to unpack .../338-r-cran-segmented_2.1-3-1_all.deb ... 237s Unpacking r-cran-segmented (2.1-3-1) ... 237s Selecting previously unselected package r-cran-mixtools. 237s Preparing to unpack .../339-r-cran-mixtools_2.0.0-1_amd64.deb ... 237s Unpacking r-cran-mixtools (2.0.0-1) ... 237s Selecting previously unselected package r-cran-patchwork. 237s Preparing to unpack .../340-r-cran-patchwork_1.3.0-1_all.deb ... 237s Unpacking r-cran-patchwork (1.3.0-1) ... 237s Selecting previously unselected package r-cran-pbapply. 237s Preparing to unpack .../341-r-cran-pbapply_1.7-2-1_all.deb ... 237s Unpacking r-cran-pbapply (1.7-2-1) ... 237s Selecting previously unselected package r-cran-pkgbuild. 237s Preparing to unpack .../342-r-cran-pkgbuild_1.4.4-1_all.deb ... 237s Unpacking r-cran-pkgbuild (1.4.4-1) ... 237s Selecting previously unselected package r-cran-pkgload. 237s Preparing to unpack .../343-r-cran-pkgload_1.4.0-1_all.deb ... 237s Unpacking r-cran-pkgload (1.4.0-1) ... 237s Selecting previously unselected package r-cran-polyclip. 237s Preparing to unpack .../344-r-cran-polyclip_1.10-7-1_amd64.deb ... 237s Unpacking r-cran-polyclip (1.10-7-1) ... 237s Selecting previously unselected package r-cran-praise. 237s Preparing to unpack .../345-r-cran-praise_1.0.0-4build1_all.deb ... 237s Unpacking r-cran-praise (1.0.0-4build1) ... 237s Selecting previously unselected package r-cran-r.methodss3. 237s Preparing to unpack .../346-r-cran-r.methodss3_1.8.2-1_all.deb ... 237s Unpacking r-cran-r.methodss3 (1.8.2-1) ... 237s Selecting previously unselected package r-cran-r.oo. 237s Preparing to unpack .../347-r-cran-r.oo_1.26.0-1_all.deb ... 237s Unpacking r-cran-r.oo (1.26.0-1) ... 237s Selecting previously unselected package r-cran-r.utils. 237s Preparing to unpack .../348-r-cran-r.utils_2.12.3-1_all.deb ... 237s Unpacking r-cran-r.utils (2.12.3-1) ... 237s Selecting previously unselected package r-cran-rcppannoy. 237s Preparing to unpack .../349-r-cran-rcppannoy_0.0.22-1_amd64.deb ... 237s Unpacking r-cran-rcppannoy (0.0.22-1) ... 237s Selecting previously unselected package r-cran-rcpphnsw. 237s Preparing to unpack .../350-r-cran-rcpphnsw_0.5.0+ds-1_amd64.deb ... 237s Unpacking r-cran-rcpphnsw (0.5.0+ds-1) ... 237s Selecting previously unselected package r-cran-rcppprogress. 237s Preparing to unpack .../351-r-cran-rcppprogress_0.4.2-2build1_all.deb ... 237s Unpacking r-cran-rcppprogress (0.4.2-2build1) ... 237s Selecting previously unselected package r-cran-rocr. 237s Preparing to unpack .../352-r-cran-rocr_1.0-11-3_all.deb ... 237s Unpacking r-cran-rocr (1.0-11-3) ... 237s Selecting previously unselected package r-cran-rspectra. 237s Preparing to unpack .../353-r-cran-rspectra_0.16-2-1_amd64.deb ... 237s Unpacking r-cran-rspectra (0.16-2-1) ... 237s Selecting previously unselected package r-cran-rsvd. 237s Preparing to unpack .../354-r-cran-rsvd_1.0.5-1_all.deb ... 237s Unpacking r-cran-rsvd (1.0.5-1) ... 237s Selecting previously unselected package r-cran-scattermore. 237s Preparing to unpack .../355-r-cran-scattermore_1.2-1_amd64.deb ... 237s Unpacking r-cran-scattermore (1.2-1) ... 237s Selecting previously unselected package r-cran-sctransform. 237s Preparing to unpack .../356-r-cran-sctransform_0.4.1-1_amd64.deb ... 237s Unpacking r-cran-sctransform (0.4.1-1) ... 237s Selecting previously unselected package r-cran-sp. 237s Preparing to unpack .../357-r-cran-sp_1%3a2.1-4+dfsg-1_amd64.deb ... 237s Unpacking r-cran-sp (1:2.1-4+dfsg-1) ... 238s Selecting previously unselected package r-cran-spam. 238s Preparing to unpack .../358-r-cran-spam_2.11-0-1_amd64.deb ... 238s Unpacking r-cran-spam (2.11-0-1) ... 238s Selecting previously unselected package r-cran-seuratobject. 238s Preparing to unpack .../359-r-cran-seuratobject_5.0.2-1_amd64.deb ... 238s Unpacking r-cran-seuratobject (5.0.2-1) ... 238s Selecting previously unselected package r-cran-spatstat.utils. 238s Preparing to unpack .../360-r-cran-spatstat.utils_3.1-0-1_amd64.deb ... 238s Unpacking r-cran-spatstat.utils (3.1-0-1) ... 238s Selecting previously unselected package r-cran-spatstat.data. 238s Preparing to unpack .../361-r-cran-spatstat.data_3.1-2-1_all.deb ... 238s Unpacking r-cran-spatstat.data (3.1-2-1) ... 238s Selecting previously unselected package r-cran-spatstat.geom. 238s Preparing to unpack .../362-r-cran-spatstat.geom_3.2-9-2_amd64.deb ... 238s Unpacking r-cran-spatstat.geom (3.2-9-2) ... 238s Selecting previously unselected package r-cran-spatstat.random. 238s Preparing to unpack .../363-r-cran-spatstat.random_3.2-3-1_amd64.deb ... 238s Unpacking r-cran-spatstat.random (3.2-3-1) ... 238s Selecting previously unselected package r-cran-tensor. 238s Preparing to unpack .../364-r-cran-tensor_1.5-4_all.deb ... 238s Unpacking r-cran-tensor (1.5-4) ... 238s Selecting previously unselected package r-cran-spatstat.sparse. 238s Preparing to unpack .../365-r-cran-spatstat.sparse_3.0-3-1_amd64.deb ... 238s Unpacking r-cran-spatstat.sparse (3.0-3-1) ... 238s Selecting previously unselected package r-cran-spatstat.explore. 238s Preparing to unpack .../366-r-cran-spatstat.explore_3.2-7-1_amd64.deb ... 238s Unpacking r-cran-spatstat.explore (3.2-7-1) ... 238s Selecting previously unselected package r-cran-uwot. 238s Preparing to unpack .../367-r-cran-uwot_0.2.2-1_amd64.deb ... 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r-bioc-genomicalignments (1.42.0-2) ... 242s Setting up r-cran-metap (1.11-1) ... 242s Setting up r-bioc-rtracklayer (1.66.0-2) ... 242s Setting up r-bioc-singlecellexperiment (1.28.1+ds-2) ... 242s Setting up r-cran-plotly (4.10.4+dfsg-2) ... 242s Setting up r-cran-mixtools (2.0.0-1) ... 242s Setting up r-cran-seurat (5.1.0-1) ... 242s Processing triggers for man-db (2.13.0-1) ... 243s Processing triggers for install-info (7.1.1-1) ... 243s Processing triggers for libc-bin (2.40-4ubuntu1) ... 244s autopkgtest [15:23:29]: test run-unit-test: [----------------------- 244s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 244s BEGIN TEST testthat.R 244s 244s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 244s Copyright (C) 2024 The R Foundation for Statistical Computing 244s Platform: x86_64-pc-linux-gnu 244s 244s R is free software and comes with ABSOLUTELY NO WARRANTY. 244s You are welcome to redistribute it under certain conditions. 244s Type 'license()' or 'licence()' for distribution details. 244s 244s R is a collaborative project with many contributors. 244s Type 'contributors()' for more information and 244s 'citation()' on how to cite R or R packages in publications. 244s 244s Type 'demo()' for some demos, 'help()' for on-line help, or 244s 'help.start()' for an HTML browser interface to help. 244s Type 'q()' to quit R. 244s 244s > library(testthat) 244s > library(Seurat) 244s Loading required package: SeuratObject 244s Loading required package: sp 246s ‘SeuratObject’ was built under R 4.4.1 but the current version is 246s 4.4.2; it is recomended that you reinstall ‘SeuratObject’ as the ABI 246s for R may have changed 246s ‘SeuratObject’ was built with package ‘Matrix’ 1.7.0 but the current 246s version is 1.7.1; it is recomended that you reinstall ‘SeuratObject’ as 246s the ABI for ‘Matrix’ may have changed 246s 246s Attaching package: ‘SeuratObject’ 246s 246s The following objects are masked from ‘package:base’: 246s 246s intersect, t 246s 248s > # 248s > # # Run tests for 'v3' 248s > # message('Run tests for v3 assay') 248s > # options(Seurat.object.assay.version = 'v3') 248s > # test_check("Seurat") 248s > 248s > # Run tests for 'v5' 248s > message('Run tests for v5 assay') 248s > options(Seurat.object.assay.version = 'v5') 248s > test_check("Seurat") 248s Run tests for v5 assay 249s | | | 0% | |======================================================================| 100% 300s Performing log-normalization 300s 0% 10 20 30 40 50 60 70 80 90 100% 300s [----|----|----|----|----|----|----|----|----|----| 300s **************************************************| 300s Performing log-normalization 300s 0% 10 20 30 40 50 60 70 80 90 100% 300s [----|----|----|----|----|----|----|----|----|----| 300s **************************************************| 300s Performing log-normalization 300s 0% 10 20 30 40 50 60 70 80 90 100% 300s [----|----|----|----|----|----|----|----|----|----| 300s **************************************************| 307s | | | 0% | |======================================================================| 100% 310s | | | 0% | |======================================================================| 100% 310s | | | 0% | |======================================================================| 100% 333s Performing log-normalization 333s 0% 10 20 30 40 50 60 70 80 90 100% 333s [----|----|----|----|----|----|----|----|----|----| 333s **************************************************| 333s Calculating gene variances 333s 0% 10 20 30 40 50 60 70 80 90 100% 333s [----|----|----|----|----|----|----|----|----|----| 333s **************************************************| 333s Calculating feature variances of standardized and clipped values 333s 0% 10 20 30 40 50 60 70 80 90 100% 333s [----|----|----|----|----|----|----|----|----|----| 333s **************************************************| 333s | | | 0% | |======================================================================| 100% 334s 0% 10 20 30 40 50 60 70 80 90 100% 334s [----|----|----|----|----|----|----|----|----|----| 334s ****************************Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck 334s 334s Number of nodes: 80 334s Number of edges: 2045 334s 334s Running Louvain algorithm... 334s **********************| 334s Maximum modularity in 10 random starts: -0.0613 334s Number of communities: 64 334s Elapsed time: 0 seconds 334s Performing log-normalization 334s 0% 10 20 30 40 50 60 70 80 90 100% 334s [----|----|----|----|----|----|----|----|----|----| 334s **************************************************| 334s | | | 0% | |======================================================================| 100% 334s | | | 0% | |======================================================================| 100% 335s | | | 0% | |======================================================================| 100% 337s | | | 0% | |======================================================================| 100% 338s | | | 0% | |======================================================================| 100% 338s [ FAIL 0 | WARN 210 | SKIP 32 | PASS 661 ] 338s 338s ══ Skipped tests (32) ══════════════════════════════════════════════════════════ 338s • arrow cannot be loaded (1): 'test_load_10X.R:179:3' 338s • On CRAN (29): 'test_differential_expression.R:307:3', 338s 'test_differential_expression.R:349:3', 338s 'test_differential_expression.R:446:3', 'test_dimensional_reduction.R:55:3', 338s 'test_integratedata.R:111:3', 'test_integration.R:74:3', 338s 'test_integration.R:105:3', 'test_integration.R:136:3', 338s 'test_integration.R:170:3', 'test_integration.R:202:3', 338s 'test_integration.R:234:3', 'test_integration.R:264:3', 338s 'test_integration.R:306:3', 'test_integration.R:335:3', 338s 'test_integration.R:365:3', 'test_integration5.R:38:3', 338s 'test_integration5.R:219:3', 'test_objects.R:6:3', 338s 'test_preprocessing.R:140:3', 'test_preprocessing.R:158:3', 338s 'test_preprocessing.R:433:3', 'test_preprocessing.R:554:3', 338s 'test_read_mtx.R:4:3', 'test_read_mtx.R:18:3', 'test_transferdata.R:65:3', 338s 'test_transferdata.R:88:3', 'test_transferdata.R:100:3', 338s 'test_transferdata.R:112:3', 'test_transferdata.R:128:3' 338s • sf cannot be loaded (2): 'test_spatial.R:115:3', 'test_spatial.R:266:3' 338s 338s [ FAIL 0 | WARN 210 | SKIP 32 | PASS 661 ] 338s > 338s > 338s > 339s autopkgtest [15:25:04]: test run-unit-test: -----------------------] 339s autopkgtest [15:25:04]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 339s run-unit-test PASS 340s autopkgtest [15:25:05]: test pkg-r-autopkgtest: preparing testbed 439s autopkgtest [15:26:44]: testbed dpkg architecture: amd64 439s autopkgtest [15:26:44]: testbed apt version: 2.9.18 439s autopkgtest [15:26:44]: @@@@@@@@@@@@@@@@@@@@ test bed setup 439s autopkgtest [15:26:44]: testbed release detected to be: plucky 440s autopkgtest [15:26:45]: updating testbed package index (apt update) 441s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 441s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 441s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 441s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 441s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [868 kB] 441s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.1 kB] 441s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [178 kB] 441s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 441s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [228 kB] 441s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [331 kB] 441s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [40.1 kB] 441s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/restricted i386 Packages [2408 B] 441s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [468 kB] 441s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [1095 kB] 441s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [4444 B] 441s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [24.9 kB] 441s Fetched 3337 kB in 1s (3446 kB/s) 442s Reading package lists... 443s Reading package lists... 443s Building dependency tree... 443s Reading state information... 443s Calculating upgrade... 443s The following packages will be upgraded: 443s libgudev-1.0-0 usb.ids 444s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 444s Need to get 239 kB of archives. 444s After this operation, 0 B of additional disk space will be used. 444s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 usb.ids all 2025.01.14-1 [223 kB] 444s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libgudev-1.0-0 amd64 1:238-6 [15.8 kB] 444s Fetched 239 kB in 0s (498 kB/s) 445s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75824 files and directories currently installed.) 445s Preparing to unpack .../usb.ids_2025.01.14-1_all.deb ... 445s Unpacking usb.ids (2025.01.14-1) over (2024.12.04-1) ... 445s Preparing to unpack .../libgudev-1.0-0_1%3a238-6_amd64.deb ... 445s Unpacking libgudev-1.0-0:amd64 (1:238-6) over (1:238-5ubuntu1) ... 445s Setting up usb.ids (2025.01.14-1) ... 445s Setting up libgudev-1.0-0:amd64 (1:238-6) ... 445s Processing triggers for libc-bin (2.40-4ubuntu1) ... 445s Reading package lists... 445s Building dependency tree... 445s Reading state information... 445s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 445s autopkgtest [15:26:50]: upgrading testbed (apt dist-upgrade and autopurge) 446s Reading package lists... 446s Building dependency tree... 446s Reading state information... 446s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 446s Starting 2 pkgProblemResolver with broken count: 0 446s Done 447s Entering ResolveByKeep 447s 447s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 447s Reading package lists... 448s Building dependency tree... 448s Reading state information... 448s Starting pkgProblemResolver with broken count: 0 448s Starting 2 pkgProblemResolver with broken count: 0 448s Done 448s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 451s Reading package lists... 452s Building dependency tree... 452s Reading state information... 452s Starting pkgProblemResolver with broken count: 11 452s Starting 2 pkgProblemResolver with broken count: 11 452s Investigating (0) r-bioc-s4vectors:amd64 < none -> 0.42.1+dfsg-2 @un puN Ib > 452s Broken r-bioc-s4vectors:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 452s Considering r-bioc-biocgenerics:amd64 46 as a solution to r-bioc-s4vectors:amd64 30 452s Re-Instated r-bioc-biocgenerics:amd64 452s Investigating (0) r-bioc-iranges:amd64 < none -> 2.38.1-1 @un puN Ib > 452s Broken r-bioc-iranges:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 452s Considering r-bioc-biocgenerics:amd64 30 as a solution to r-bioc-iranges:amd64 21 452s Investigating (0) r-bioc-genomicranges:amd64 < none -> 1.56.2+dfsg-1 @un puN Ib > 452s Broken r-bioc-genomicranges:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 452s Considering r-bioc-biocgenerics:amd64 30 as a solution to r-bioc-genomicranges:amd64 8 452s Broken r-bioc-genomicranges:amd64 Depends on r-bioc-xvector:amd64 < none | 0.44.0-1 @un uH > (>= 0.29.2) 452s Considering r-bioc-xvector:amd64 0 as a solution to r-bioc-genomicranges:amd64 8 452s Reinst Failed because of protected r-bioc-biocgenerics:amd64 452s Considering r-bioc-xvector:amd64 0 as a solution to r-bioc-genomicranges:amd64 8 452s Investigating (0) r-bioc-biobase:amd64 < none -> 2.64.0-4 @un puN Ib > 452s Broken r-bioc-biobase:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 452s Considering r-bioc-biocgenerics:amd64 30 as a solution to r-bioc-biobase:amd64 7 452s Investigating (0) r-bioc-ucsc.utils:amd64 < none -> 1.0.0+ds-2 @un puN Ib > 452s Broken r-bioc-ucsc.utils:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 452s Considering r-bioc-biocgenerics:amd64 30 as a solution to r-bioc-ucsc.utils:amd64 4 452s Investigating (0) r-bioc-delayedarray:amd64 < none -> 0.30.1+dfsg-1 @un puN Ib > 452s Broken r-bioc-delayedarray:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 452s Considering r-bioc-biocgenerics:amd64 30 as a solution to r-bioc-delayedarray:amd64 4 452s Broken r-bioc-delayedarray:amd64 Depends on r-bioc-matrixgenerics:amd64 < none | 1.16.0-2 @un uH > (>= 1.16.0) 452s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-delayedarray:amd64 4 452s Reinst Failed because of protected r-bioc-biocgenerics:amd64 452s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-delayedarray:amd64 4 452s Broken r-bioc-delayedarray:amd64 Depends on r-bioc-s4arrays:amd64 < none | 1.4.1+dfsg-1 @un uH > (>= 1.4.1) 452s Considering r-bioc-s4arrays:amd64 0 as a solution to r-bioc-delayedarray:amd64 4 452s Reinst Failed because of protected r-bioc-biocgenerics:amd64 452s Considering r-bioc-s4arrays:amd64 0 as a solution to r-bioc-delayedarray:amd64 4 452s Broken r-bioc-delayedarray:amd64 Depends on r-bioc-sparsearray:amd64 < none | 1.4.8+dfsg-1 @un uH > (>= 1.4.8) 452s Considering r-bioc-sparsearray:amd64 0 as a solution to r-bioc-delayedarray:amd64 4 452s Reinst Failed because of protected r-bioc-biocgenerics:amd64 452s Considering r-bioc-sparsearray:amd64 0 as a solution to r-bioc-delayedarray:amd64 4 452s Investigating (0) r-bioc-summarizedexperiment:amd64 < none -> 1.34.0+dfsg-1 @un puN Ib > 452s Broken r-bioc-summarizedexperiment:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 452s Considering r-bioc-biocgenerics:amd64 30 as a solution to r-bioc-summarizedexperiment:amd64 3 452s Broken r-bioc-summarizedexperiment:amd64 Depends on r-bioc-matrixgenerics:amd64 < none | 1.16.0-2 @un uH > (>= 1.16.0) 452s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-summarizedexperiment:amd64 3 452s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-summarizedexperiment:amd64 3 452s Broken r-bioc-summarizedexperiment:amd64 Depends on r-bioc-s4arrays:amd64 < none | 1.4.1+dfsg-1 @un uH > (>= 1.4.1) 452s Considering r-bioc-s4arrays:amd64 0 as a solution to r-bioc-summarizedexperiment:amd64 3 452s Considering r-bioc-s4arrays:amd64 0 as a solution to r-bioc-summarizedexperiment:amd64 3 452s Investigating (0) r-bioc-rtracklayer:amd64 < none -> 1.64.0-1 @un puN Ib > 452s Broken r-bioc-rtracklayer:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 452s Considering r-bioc-biocgenerics:amd64 30 as a solution to r-bioc-rtracklayer:amd64 1 452s Broken r-bioc-rtracklayer:amd64 Depends on r-cran-xml:amd64 < none | 3.99-0.18-1 @un uH > (>= 1.98-0) 452s Considering r-cran-xml:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 452s Re-Instated r-cran-xml:amd64 452s Broken r-bioc-rtracklayer:amd64 Depends on r-bioc-xvector:amd64 < none | 0.44.0-1 @un uH > (>= 0.44.0) 452s Considering r-bioc-xvector:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 452s Considering r-bioc-xvector:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 452s Broken r-bioc-rtracklayer:amd64 Depends on r-bioc-biostrings:amd64 < none | 2.72.1+dfsg-1 @un uH > (>= 2.72.1) 452s Considering r-bioc-biostrings:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 452s Reinst Failed because of protected r-bioc-biocgenerics:amd64 452s Considering r-bioc-biostrings:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 452s Broken r-bioc-rtracklayer:amd64 Depends on r-bioc-zlibbioc:amd64 < none | 1.50.0+dfsg-2 @un uH > (>= 1.50.0) 452s Considering r-bioc-zlibbioc:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 452s Reinst Failed because of protected r-bioc-biocgenerics:amd64 452s Considering r-bioc-zlibbioc:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 452s Broken r-bioc-rtracklayer:amd64 Depends on r-bioc-rsamtools:amd64 < none | 2.20.0+dfsg-1 @un uH > (>= 2.20.0) 452s Considering r-bioc-rsamtools:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 452s Reinst Failed because of protected r-bioc-biocgenerics:amd64 452s Considering r-bioc-rsamtools:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 452s Broken r-bioc-rtracklayer:amd64 Depends on r-bioc-genomicalignments:amd64 < none | 1.40.0-1 @un uH > (>= 1.40.0) 452s Considering r-bioc-genomicalignments:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 452s Reinst Failed because of protected r-bioc-biocgenerics:amd64 452s Considering r-bioc-genomicalignments:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 452s Broken r-bioc-rtracklayer:amd64 Depends on r-bioc-biocio:amd64 < none | 1.14.0+dfsg-1 @un uH > (>= 1.14.0) 452s Considering r-bioc-biocio:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 452s Reinst Failed because of protected r-bioc-biocgenerics:amd64 452s Considering r-bioc-biocio:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 452s Broken r-bioc-rtracklayer:amd64 Depends on r-cran-restfulr:amd64 < none | 0.0.15-1 @un uH > (>= 0.0.13) 452s Considering r-cran-restfulr:amd64 0 as a solution to r-bioc-rtracklayer:amd64 1 452s Re-Instated r-cran-rcurl:amd64 452s Re-Instated r-cran-rjson:amd64 452s Re-Instated r-cran-restfulr:amd64 452s Investigating (0) r-bioc-limma:amd64 < none -> 3.60.6+dfsg-1 @un puN Ib > 452s Broken r-bioc-limma:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 452s Considering r-bioc-biocgenerics:amd64 30 as a solution to r-bioc-limma:amd64 1 452s Broken r-bioc-limma:amd64 Depends on r-cran-statmod:amd64 < none | 1.5.0-1 @un uH > 452s Considering r-cran-statmod:amd64 1 as a solution to r-bioc-limma:amd64 1 452s Re-Instated r-cran-statmod:amd64 452s Investigating (0) r-bioc-deseq2:amd64 < none -> 1.44.0+dfsg-1 @un puN Ib > 452s Broken r-bioc-deseq2:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 452s Considering r-bioc-biocgenerics:amd64 30 as a solution to r-bioc-deseq2:amd64 1 452s Broken r-bioc-deseq2:amd64 Depends on r-bioc-biocparallel:amd64 < none | 1.38.0-2 @un uH > (>= 1.38.0) 452s Considering r-bioc-biocparallel:amd64 0 as a solution to r-bioc-deseq2:amd64 1 452s Reinst Failed because of protected r-bioc-biocgenerics:amd64 452s Considering r-bioc-biocparallel:amd64 0 as a solution to r-bioc-deseq2:amd64 1 452s Broken r-bioc-deseq2:amd64 Depends on r-cran-locfit:amd64 < none | 1.5-9.10-1 @un uH > 452s Considering r-cran-locfit:amd64 2 as a solution to r-bioc-deseq2:amd64 1 452s Re-Instated r-cran-locfit:amd64 452s Broken r-bioc-deseq2:amd64 Depends on r-bioc-matrixgenerics:amd64 < none | 1.16.0-2 @un uH > (>= 1.16.0) 452s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-deseq2:amd64 1 452s Considering r-bioc-matrixgenerics:amd64 0 as a solution to r-bioc-deseq2:amd64 1 452s Investigating (0) r-bioc-multtest:amd64 < none -> 2.60.0-1 @un puN Ib > 452s Broken r-bioc-multtest:amd64 Depends on r-api-bioc-3.19:amd64 < none @un H > 452s Considering r-bioc-biocgenerics:amd64 30 as a solution to r-bioc-multtest:amd64 0 452s Done 452s Some packages could not be installed. This may mean that you have 452s requested an impossible situation or if you are using the unstable 452s distribution that some required packages have not yet been created 452s or been moved out of Incoming. 452s The following information may help to resolve the situation: 452s 452s The following packages have unmet dependencies: 452s r-bioc-biobase : Depends: r-api-bioc-3.19 452s r-bioc-delayedarray : Depends: r-api-bioc-3.19 452s Depends: r-bioc-matrixgenerics (>= 1.16.0) but it is not going to be installed 452s Depends: r-bioc-s4arrays (>= 1.4.1) but it is not going to be installed 452s Depends: r-bioc-sparsearray (>= 1.4.8) but it is not going to be installed 452s r-bioc-deseq2 : Depends: r-api-bioc-3.19 452s Depends: r-bioc-biocparallel (>= 1.38.0) but it is not going to be installed 452s Depends: r-bioc-matrixgenerics (>= 1.16.0) but it is not going to be installed 452s r-bioc-genomicranges : Depends: r-api-bioc-3.19 452s Depends: r-bioc-xvector (>= 0.29.2) but it is not going to be installed 452s r-bioc-iranges : Depends: r-api-bioc-3.19 452s r-bioc-limma : Depends: r-api-bioc-3.19 452s r-bioc-multtest : Depends: r-api-bioc-3.19 452s r-bioc-rtracklayer : Depends: r-api-bioc-3.19 452s Depends: r-bioc-xvector (>= 0.44.0) but it is not going to be installed 452s Depends: r-bioc-biostrings (>= 2.72.1) but it is not going to be installed 452s Depends: r-bioc-zlibbioc (>= 1.50.0) but it is not going to be installed 452s Depends: r-bioc-rsamtools (>= 2.20.0) but it is not going to be installed 452s Depends: r-bioc-genomicalignments (>= 1.40.0) but it is not going to be installed 452s Depends: r-bioc-biocio (>= 1.14.0) but it is not going to be installed 452s r-bioc-s4vectors : Depends: r-api-bioc-3.19 452s r-bioc-summarizedexperiment : Depends: r-api-bioc-3.19 452s Depends: r-bioc-matrixgenerics (>= 1.16.0) but it is not going to be installed 452s Depends: r-bioc-s4arrays (>= 1.4.1) but it is not going to be installed 452s r-bioc-ucsc.utils : Depends: r-api-bioc-3.19 452s E: Unable to correct problems, you have held broken packages. 452s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from plucky-proposed 452s Reading package lists... 453s Building dependency tree... 453s Reading state information... 453s Starting pkgProblemResolver with broken count: 0 453s Starting 2 pkgProblemResolver with broken count: 0 453s Done 453s The following NEW packages will be installed: 453s build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu 453s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 453s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-14 453s g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 453s gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-14 453s gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools 453s javascript-common libamd3 libasan8 libblas-dev libblas3 libboost-dev 453s libboost1.83-dev libbz2-dev libcairo2 libcc1-0 libcolamd3 libdatrie1 453s libdeflate-dev libdeflate0 libfftw3-double3 libfontconfig1 libgcc-14-dev 453s libgfortran-14-dev libgfortran5 libglpk40 libgomp1 libgraphite2-3 453s libharfbuzz0b libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 453s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 453s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 453s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 453s libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js 453s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 453s libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 liblerc4 453s liblsan0 libltdl7 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev 453s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 453s libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 453s libpixman-1-0 libpkgconf3 libpng-dev libquadmath0 libreadline-dev 453s libsharpyuv0 libsm6 libstdc++-14-dev libsuitesparseconfig7 libtcl8.6 453s libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 453s libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 453s littler node-bootstrap-sass node-html5shiv node-normalize.css pandoc 453s pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 453s r-bioc-biobase r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 453s r-bioc-biostrings r-bioc-delayedarray r-bioc-deseq2 r-bioc-genomeinfodb 453s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicranges 453s r-bioc-iranges r-bioc-limma r-bioc-matrixgenerics r-bioc-multtest 453s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 453s r-bioc-s4vectors r-bioc-sparsearray r-bioc-summarizedexperiment 453s r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-ape 453s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-bitops r-cran-brio 453s r-cran-bslib r-cran-cachem r-cran-callr r-cran-caret r-cran-catools 453s r-cran-class r-cran-cli r-cran-clock r-cran-cluster r-cran-codetools 453s r-cran-colorspace r-cran-colourpicker r-cran-commonmark r-cran-conquer 453s r-cran-cowplot r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl 453s r-cran-data.table r-cran-deldir r-cran-deoptimr r-cran-desc r-cran-diagram 453s r-cran-diffobj r-cran-digest r-cran-dotcall64 r-cran-dplyr r-cran-dqrng 453s r-cran-e1071 r-cran-evaluate r-cran-fansi r-cran-farver r-cran-fastdummies 453s r-cran-fastmap r-cran-fitdistrplus r-cran-fnn r-cran-fontawesome 453s r-cran-foreach r-cran-formatr r-cran-fs r-cran-futile.logger 453s r-cran-futile.options r-cran-future r-cran-future.apply r-cran-gdata 453s r-cran-generics r-cran-ggplot2 r-cran-ggrepel r-cran-ggridges r-cran-globals 453s r-cran-glue r-cran-goftest r-cran-gower r-cran-gplots r-cran-gridextra 453s r-cran-gtable r-cran-gtools r-cran-hardhat r-cran-here r-cran-highr 453s r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-ica 453s r-cran-igraph r-cran-ipred r-cran-irlba r-cran-isoband r-cran-iterators 453s r-cran-jquerylib r-cran-jsonlite r-cran-kernlab r-cran-kernsmooth 453s r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later r-cran-lattice 453s r-cran-lava r-cran-lazyeval r-cran-leiden r-cran-lifecycle r-cran-listenv 453s r-cran-littler r-cran-lmtest r-cran-locfit r-cran-lubridate r-cran-magrittr 453s r-cran-mass r-cran-mathjaxr r-cran-matrix r-cran-matrixmodels 453s r-cran-matrixstats r-cran-memoise r-cran-metap r-cran-mgcv r-cran-mime 453s r-cran-miniui r-cran-mixtools r-cran-mnormt r-cran-modelmetrics 453s r-cran-multcomp r-cran-munsell r-cran-mutoss r-cran-mvtnorm r-cran-nlme 453s r-cran-nnet r-cran-numderiv r-cran-openssl r-cran-parallelly 453s r-cran-patchwork r-cran-pbapply r-cran-pillar r-cran-pkgbuild 453s r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plotly 453s r-cran-plotrix r-cran-plyr r-cran-png r-cran-polyclip r-cran-praise 453s r-cran-proc r-cran-processx r-cran-prodlim r-cran-progressr r-cran-promises 453s r-cran-proxy r-cran-ps r-cran-purrr r-cran-qqconf r-cran-quantreg 453s r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils r-cran-r6 r-cran-rann 453s r-cran-rappdirs r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp 453s r-cran-rcppannoy r-cran-rcpparmadillo r-cran-rcppeigen r-cran-rcpphnsw 453s r-cran-rcppprogress r-cran-rcpptoml r-cran-rcurl r-cran-rdpack 453s r-cran-recipes r-cran-reshape2 r-cran-restfulr r-cran-reticulate 453s r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-robustbase r-cran-rocr 453s r-cran-rpart r-cran-rprojroot r-cran-rspectra r-cran-rsvd r-cran-rtsne 453s r-cran-sandwich r-cran-sass r-cran-scales r-cran-scattermore 453s r-cran-sctransform r-cran-segmented r-cran-seurat r-cran-seuratobject 453s r-cran-shape r-cran-shiny r-cran-shinyjs r-cran-sitmo r-cran-sn r-cran-snow 453s r-cran-sourcetools r-cran-sp r-cran-spam r-cran-sparsem r-cran-spatstat.data 453s r-cran-spatstat.explore r-cran-spatstat.geom r-cran-spatstat.random 453s r-cran-spatstat.sparse r-cran-spatstat.utils r-cran-squarem r-cran-statmod 453s r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys r-cran-tensor 453s r-cran-testthat r-cran-tfisher r-cran-th.data r-cran-tibble r-cran-tidyr 453s r-cran-tidyselect r-cran-timechange r-cran-timedate r-cran-tinytex 453s r-cran-tzdb r-cran-utf8 r-cran-uwot r-cran-vctrs r-cran-vgam 453s r-cran-viridislite r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml 453s r-cran-xtable r-cran-yaml r-cran-zoo unzip x11-common xdg-utils zip 453s zlib1g-dev 453s The following packages will be upgraded: 453s gcc-14-base libatomic1 libgcc-s1 libpng16-16t64 libstdc++6 454s 5 upgraded, 386 newly installed, 0 to remove and 125 not upgraded. 454s Need to get 458 MB of archives. 454s After this operation, 1318 MB of additional disk space will be used. 454s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 gcc-14-base amd64 14.2.0-13ubuntu1 [53.0 kB] 454s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libstdc++6 amd64 14.2.0-13ubuntu1 [787 kB] 454s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libatomic1 amd64 14.2.0-13ubuntu1 [10.3 kB] 454s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libgcc-s1 amd64 14.2.0-13ubuntu1 [78.2 kB] 454s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpng16-16t64 amd64 1.6.45-1 [219 kB] 454s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 454s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 454s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-13ubuntu1 [11.9 MB] 454s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 cpp-14 amd64 14.2.0-13ubuntu1 [1032 B] 454s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [5452 B] 454s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.1.0-2ubuntu1 [22.4 kB] 454s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libcc1-0 amd64 14.2.0-13ubuntu1 [47.6 kB] 454s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libgomp1 amd64 14.2.0-13ubuntu1 [148 kB] 454s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libitm1 amd64 14.2.0-13ubuntu1 [29.1 kB] 454s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libasan8 amd64 14.2.0-13ubuntu1 [2998 kB] 455s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 liblsan0 amd64 14.2.0-13ubuntu1 [1317 kB] 455s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libtsan2 amd64 14.2.0-13ubuntu1 [2732 kB] 455s Get:18 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libubsan1 amd64 14.2.0-13ubuntu1 [1177 kB] 455s Get:19 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libhwasan0 amd64 14.2.0-13ubuntu1 [1634 kB] 455s Get:20 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libquadmath0 amd64 14.2.0-13ubuntu1 [153 kB] 455s Get:21 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libgcc-14-dev amd64 14.2.0-13ubuntu1 [2815 kB] 455s Get:22 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-13ubuntu1 [23.4 MB] 455s Get:23 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 gcc-14 amd64 14.2.0-13ubuntu1 [534 kB] 455s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1214 B] 455s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.1.0-2ubuntu1 [5000 B] 455s Get:26 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libstdc++-14-dev amd64 14.2.0-13ubuntu1 [2508 kB] 455s Get:27 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-13ubuntu1 [13.3 MB] 456s Get:28 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 g++-14 amd64 14.2.0-13ubuntu1 [21.1 kB] 456s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [966 B] 456s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.1.0-2ubuntu1 [1100 B] 456s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 456s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 dctrl-tools amd64 2.24-3build3 [106 kB] 456s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 456s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 456s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB] 456s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB] 456s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB] 456s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 456s Get:39 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 456s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 456s Get:41 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libgfortran5 amd64 14.2.0-13ubuntu1 [909 kB] 456s Get:42 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libgfortran-14-dev amd64 14.2.0-13ubuntu1 [965 kB] 456s Get:43 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-13ubuntu1 [12.5 MB] 456s Get:44 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 gfortran-14 amd64 14.2.0-13ubuntu1 [13.2 kB] 456s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1022 B] 456s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran amd64 4:14.1.0-2ubuntu1 [1172 B] 456s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 icu-devtools amd64 76.1-1ubuntu2 [237 kB] 456s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 11+nmu1 [5936 B] 456s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libsuitesparseconfig7 amd64 1:7.8.3+dfsg-2 [13.4 kB] 456s Get:50 http://ftpmaster.internal/ubuntu plucky/universe amd64 libamd3 amd64 1:7.8.3+dfsg-2 [31.1 kB] 456s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-4 [332 kB] 457s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas-dev amd64 3.12.0-4 [307 kB] 457s Get:53 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libboost1.83-dev amd64 1.83.0-4ubuntu2 [10.7 MB] 457s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost-dev amd64 1.83.0.2ubuntu1 [4468 B] 457s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libbz2-dev amd64 1.0.8-6 [33.8 kB] 457s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 457s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 457s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 457s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 457s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 457s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libcolamd3 amd64 1:7.8.3+dfsg-2 [19.5 kB] 457s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 457s Get:63 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB] 457s Get:64 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libdeflate-dev amd64 1.23-1 [71.7 kB] 457s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libfftw3-double3 amd64 3.3.10-2fakesync1build1 [839 kB] 457s Get:66 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libltdl7 amd64 2.5.4-2 [46.0 kB] 457s Get:67 http://ftpmaster.internal/ubuntu plucky/universe amd64 libglpk40 amd64 5.0-1build2 [369 kB] 457s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 457s Get:69 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB] 457s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 457s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 457s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 libicu-dev amd64 76.1-1ubuntu2 [12.6 MB] 458s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 458s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8-dev amd64 2.1.5-3ubuntu2 [324 kB] 458s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 458s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 458s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 458s Get:78 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 458s Get:79 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 458s Get:80 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 458s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 458s Get:82 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 458s Get:83 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 458s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 458s Get:85 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 458s Get:86 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 458s Get:87 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 458s Get:88 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 458s Get:89 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 458s Get:90 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 458s Get:91 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 458s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-4 [3177 kB] 458s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack-dev amd64 3.12.0-4 [6486 kB] 458s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 458s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 liblua5.4-0 amd64 5.4.7-1 [196 kB] 458s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses-dev amd64 6.5-2 [384 kB] 458s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 458s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 458s Get:99 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpango-1.0-0 amd64 1.56.0-3 [255 kB] 458s Get:100 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpangoft2-1.0-0 amd64 1.56.0-3 [52.5 kB] 458s Get:101 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpangocairo-1.0-0 amd64 1.56.0-3 [29.1 kB] 458s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB] 458s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB] 458s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.42-4ubuntu3 [214 kB] 459s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-32-0 amd64 10.42-4ubuntu3 [201 kB] 459s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-posix3 amd64 10.42-4ubuntu3 [6768 B] 459s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-dev amd64 10.42-4ubuntu3 [747 kB] 459s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 libpkgconf3 amd64 1.8.1-4 [32.3 kB] 459s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 459s Get:110 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpng-dev amd64 1.6.45-1 [300 kB] 459s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 libreadline-dev amd64 8.2-6 [184 kB] 459s Get:112 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 459s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 459s Get:114 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB] 459s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 459s Get:116 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 459s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 459s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 459s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 459s Get:120 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB] 459s Get:121 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 459s Get:122 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu1 [185 kB] 459s Get:123 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 459s Get:124 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 459s Get:125 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-base-core amd64 4.4.2-1build1 [28.9 MB] 460s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-2 [96.6 kB] 460s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-2 [2554 B] 460s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 460s Get:129 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 460s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 460s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 460s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc amd64 3.1.11.1+ds-2 [27.2 MB] 460s Get:133 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma-dev amd64 5.6.3-1 [189 kB] 460s Get:134 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf-bin amd64 1.8.1-4 [21.6 kB] 460s Get:135 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf amd64 1.8.1-4 [16.8 kB] 460s Get:136 http://ftpmaster.internal/ubuntu plucky/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3 [193 kB] 460s Get:137 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-base-dev all 4.4.2-1build1 [4342 B] 460s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 460s Get:139 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 461s Get:140 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-biobase amd64 2.66.0-2 [2332 kB] 461s Get:141 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2065 kB] 461s Get:142 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 461s Get:143 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-formatr all 1.14-2 [152 kB] 461s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 461s Get:145 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 461s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 461s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 461s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-codetools all 0.2-20-1 [90.5 kB] 461s Get:149 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bh all 1.84.0-1 [5962 B] 461s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cpp11 all 0.5.0-1 [221 kB] 461s Get:151 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-biocparallel amd64 1.40.0-2 [1337 kB] 461s Get:152 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-iranges amd64 2.40.1-2 [2310 kB] 461s Get:153 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 461s Get:154 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-xvector amd64 0.46.0-2 [620 kB] 461s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-curl amd64 5.2.3+dfsg-1ubuntu1 [180 kB] 461s Get:156 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.8.9+dfsg-1 [445 kB] 461s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 461s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB] 461s Get:159 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB] 461s Get:160 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-openssl amd64 2.2.0+dfsg-1 [405 kB] 461s Get:161 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB] 461s Get:162 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 461s Get:163 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 461s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 461s Get:165 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-genomeinfodb all 1.42.1+dfsg-2 [3883 kB] 461s Get:166 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.2-1 [164 kB] 461s Get:167 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-biostrings amd64 2.74.1+dfsg-2 [13.3 MB] 462s Get:168 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 462s Get:169 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrix amd64 1.7-1-1 [4199 kB] 462s Get:170 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixstats amd64 1.4.1-1 [513 kB] 462s Get:171 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-matrixgenerics all 1.18.0-2 [446 kB] 462s Get:172 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-abind all 1.4-8-1 [66.9 kB] 462s Get:173 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-s4arrays amd64 1.6.0+dfsg-2 [698 kB] 462s Get:174 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-sparsearray amd64 1.6.0+dfsg-2 [1392 kB] 462s Get:175 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-delayedarray amd64 0.32.0+dfsg-2 [2064 kB] 462s Get:176 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-genomicranges amd64 1.58.0+dfsg-2 [2083 kB] 462s Get:177 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 462s Get:178 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-locfit amd64 1.5-9.10-1 [518 kB] 462s Get:179 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.3-1 [1348 kB] 462s Get:180 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 462s Get:181 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.4-1 [1708 kB] 462s Get:182 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 462s Get:183 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 462s Get:184 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 462s Get:185 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-mass amd64 7.3-64-1 [1114 kB] 462s Get:186 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nlme amd64 3.1.166-1 [2314 kB] 462s Get:187 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB] 462s Get:188 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB] 462s Get:189 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 462s Get:190 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colorspace amd64 2.1-1+dfsg-1 [1563 kB] 462s Get:191 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-munsell all 0.5.1-1 [213 kB] 462s Get:192 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 462s Get:193 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridislite all 0.4.2-2 [1088 kB] 462s Get:194 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scales all 1.3.0-1 [603 kB] 462s Get:195 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 462s Get:196 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 462s Get:197 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 462s Get:198 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 462s Get:199 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 463s Get:200 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 463s Get:201 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-2 [415 kB] 463s Get:202 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 463s Get:203 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 463s Get:204 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 463s Get:205 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-rcpp amd64 1.0.14-1 [1998 kB] 463s Get:206 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpparmadillo amd64 14.2.2-1-1 [864 kB] 463s Get:207 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-deseq2 amd64 1.46.0+dfsg-2 [1250 kB] 463s Get:208 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bitops amd64 1.0-8-1 [30.3 kB] 463s Get:209 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-rhtslib amd64 3.2.0+dfsg-2 [1499 kB] 463s Get:210 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-rsamtools amd64 2.22.0+dfsg-2 [3745 kB] 464s Get:211 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-genomicalignments amd64 1.42.0-2 [2165 kB] 464s Get:212 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-statmod amd64 1.5.0-1 [295 kB] 464s Get:213 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-limma amd64 3.62.2+dfsg-1 [1969 kB] 464s Get:214 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-survival amd64 3.8-3-1 [8239 kB] 464s Get:215 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-multtest amd64 2.62.0-2 [844 kB] 464s Get:216 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xml amd64 3.99-0.18-1 [1748 kB] 464s Get:217 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcurl amd64 1.98-1.16+dfsg-1 [807 kB] 464s Get:218 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rjson amd64 0.2.23-1 [104 kB] 464s Get:219 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB] 464s Get:220 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-restfulr amd64 0.0.15-1 [380 kB] 464s Get:221 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-bioc-rtracklayer amd64 1.66.0-2 [5227 kB] 464s Get:222 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB] 464s Get:223 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ape amd64 5.8-1 [2923 kB] 465s Get:224 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 465s Get:225 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 465s Get:226 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 465s Get:227 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 465s Get:228 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 465s Get:229 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 465s Get:230 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 465s Get:231 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.4+dfsg-1 [245 kB] 465s Get:232 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 465s Get:233 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 465s Get:234 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.7.0+dfsg-1 [4255 kB] 465s Get:235 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ps amd64 1.8.0-1 [395 kB] 465s Get:236 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-processx amd64 3.8.4-1 [353 kB] 465s Get:237 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 465s Get:238 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-class amd64 7.3-23-1 [92.7 kB] 465s Get:239 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB] 465s Get:240 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-e1071 amd64 1.7-16-1 [565 kB] 465s Get:241 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-iterators all 1.0.14-1 [336 kB] 465s Get:242 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-foreach all 1.5.2-1 [124 kB] 465s Get:243 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-data.table amd64 1.16.4+dfsg-1 [2032 kB] 465s Get:244 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-modelmetrics amd64 1.2.2.2-1build1 [128 kB] 465s Get:245 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB] 465s Get:246 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proc amd64 1.18.5-1 [966 kB] 465s Get:247 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB] 465s Get:248 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB] 465s Get:249 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB] 465s Get:250 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tzdb amd64 0.4.0-2 [521 kB] 465s Get:251 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-clock amd64 0.7.1-1 [1804 kB] 465s Get:252 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gower amd64 1.0.1-1 [207 kB] 465s Get:253 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-hardhat all 1.4.0+dfsg-1 [565 kB] 465s Get:254 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rpart amd64 4.1.24-1 [670 kB] 465s Get:255 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nnet amd64 7.3-20-1 [116 kB] 465s Get:256 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shape all 1.4.6.1-1 [749 kB] 465s Get:257 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diagram all 1.6.5-2 [656 kB] 465s Get:258 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernsmooth amd64 2.23-26-1 [94.5 kB] 465s Get:259 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-globals all 0.16.3-1 [120 kB] 465s Get:260 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-listenv all 0.9.1+dfsg-1 [112 kB] 465s Get:261 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-parallelly amd64 1.38.0-1 [385 kB] 465s Get:262 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-future all 1.34.0+dfsg-1 [646 kB] 465s Get:263 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-future.apply all 1.11.2+dfsg-1 [172 kB] 465s Get:264 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-numderiv all 2016.8-1.1-3 [115 kB] 465s Get:265 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-progressr all 0.14.0-1 [338 kB] 465s Get:266 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-squarem all 2021.1-1 [179 kB] 465s Get:267 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lava all 1.7.3+dfsg-1 [2166 kB] 466s Get:268 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-prodlim amd64 2024.06.25-1 [415 kB] 466s Get:269 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ipred amd64 0.9-15-1 [386 kB] 466s Get:270 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-timechange amd64 0.3.0-1 [178 kB] 466s Get:271 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lubridate amd64 1.9.3+dfsg-1 [1010 kB] 466s Get:272 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-purrr amd64 1.0.2-1 [502 kB] 466s Get:273 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-stringi amd64 1.8.4-1build1 [927 kB] 466s Get:274 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 466s Get:275 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 466s Get:276 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-timedate amd64 4041.110-1 [1208 kB] 466s Get:277 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-recipes all 1.1.0+dfsg-1 [2035 kB] 466s Get:278 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reshape2 amd64 1.4.4-2build1 [114 kB] 466s Get:279 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-caret amd64 6.0-94+dfsg-1 [3434 kB] 466s Get:280 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-catools amd64 1.18.2-1 [201 kB] 466s Get:281 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cluster amd64 2.1.8-1 [579 kB] 466s Get:282 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 1.0.0-1 [111 kB] 466s Get:283 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xfun amd64 0.49+dfsg-1 [545 kB] 466s Get:284 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 466s Get:285 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 466s Get:286 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 466s Get:287 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 466s Get:288 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tinytex all 0.53-1 [145 kB] 466s Get:289 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-modernizr all 3.13.0-0.1 [101 kB] 466s Get:290 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.3.2+dfsg-1 [123 kB] 466s Get:291 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.0+dfsg-1 [287 kB] 466s Get:292 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 466s Get:293 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 466s Get:294 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 466s Get:295 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.2-2 [137 kB] 466s Get:296 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 466s Get:297 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.9.1+dfsg-1 [3111 kB] 466s Get:298 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rmarkdown all 2.28+dfsg-1 [1501 kB] 467s Get:299 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 467s Get:300 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-miniui all 0.1.1.1-3build1 [36.1 kB] 467s Get:301 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shinyjs all 2.1.0-1 [967 kB] 467s Get:302 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colourpicker all 1.3.0+dfsg-1 [1191 kB] 467s Get:303 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-conquer amd64 1.3.3-1 [499 kB] 467s Get:304 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cowplot all 1.1.3+dfsg-1 [614 kB] 467s Get:305 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lazyeval amd64 0.2.2-1build1 [144 kB] 467s Get:306 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 467s Get:307 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-deldir amd64 2.0-4-1build1 [270 kB] 467s Get:308 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-deoptimr all 1.1-3-1-1 [76.6 kB] 467s Get:309 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 467s Get:310 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 467s Get:311 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dotcall64 amd64 1.1-1-1 [38.1 kB] 467s Get:312 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sitmo amd64 2.0.2-1 [130 kB] 467s Get:313 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dqrng amd64 0.3.2+dfsg-1 [161 kB] 467s Get:314 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastdummies all 1.7.4-1 [49.7 kB] 467s Get:315 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fitdistrplus all 1.2-1-1 [2038 kB] 467s Get:316 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fnn amd64 1.1.4.1-1 [126 kB] 467s Get:317 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtools amd64 3.9.5-1 [340 kB] 467s Get:318 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gdata all 3.0.1-1 [491 kB] 467s Get:319 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggrepel amd64 0.9.5-2 [254 kB] 467s Get:320 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggridges all 0.5.6-1 [2195 kB] 468s Get:321 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-goftest amd64 1.2-3-1 [59.5 kB] 468s Get:322 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gplots all 3.2.0-1 [484 kB] 468s Get:323 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gridextra all 2.3-3build1 [1024 kB] 468s Get:324 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rprojroot all 2.0.4-1 [124 kB] 468s Get:325 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-here all 1.0.1-2 [50.3 kB] 468s Get:326 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ica all 1.0-3-1 [85.4 kB] 468s Get:327 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-igraph amd64 2.0.3-1 [5098 kB] 468s Get:328 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-irlba amd64 2.3.5.1-4 [295 kB] 468s Get:329 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernlab amd64 0.9-33-1 [1947 kB] 470s Get:330 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpptoml amd64 0.2.2+dfsg-1 [110 kB] 470s Get:331 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-png amd64 0.1-8-1build2 [40.6 kB] 470s Get:332 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reticulate amd64 1.39.0+dfsg-1 [1238 kB] 470s Get:333 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-leiden all 0.4.3.1+dfsg-1 [71.9 kB] 470s Get:334 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-zoo amd64 1.8-12-2 [984 kB] 470s Get:335 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lmtest amd64 0.9.40-1 [396 kB] 470s Get:336 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mathjaxr all 1.6-0-1 [605 kB] 470s Get:337 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixmodels all 0.5-3-1 [361 kB] 470s Get:338 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rbibutils amd64 2.3-1 [1023 kB] 470s Get:339 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rdpack all 2.6.2-1 [757 kB] 470s Get:340 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mnormt amd64 2.1.1-2 [170 kB] 470s Get:341 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sparsem amd64 1.84-2-1 [813 kB] 470s Get:342 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-quantreg amd64 5.99.1-1 [1455 kB] 470s Get:343 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sn all 2.1.1-2 [1815 kB] 470s Get:344 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-mvtnorm amd64 1.3-3-1 [923 kB] 470s Get:345 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tfisher all 0.2.0-3 [79.8 kB] 470s Get:346 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plotrix all 3.8-4-1 [1120 kB] 470s Get:347 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-th.data all 1.1-2-2 [8794 kB] 470s Get:348 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sandwich all 3.1-1-1 [1483 kB] 470s Get:349 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-multcomp all 1.4-26-2 [699 kB] 470s Get:350 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mutoss all 0.1-13-1 [1123 kB] 470s Get:351 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-robustbase amd64 0.99-4-1-1 [3038 kB] 470s Get:352 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-qqconf amd64 1.3.2+dfsg-1 [157 kB] 470s Get:353 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-metap all 1.11-1 [570 kB] 470s Get:354 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plotly all 4.10.4+dfsg-2 [3666 kB] 470s Get:355 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-segmented all 2.1-3-1 [1366 kB] 470s Get:356 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mixtools amd64 2.0.0-1 [1399 kB] 470s Get:357 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-patchwork all 1.3.0-1 [3220 kB] 470s Get:358 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pbapply all 1.7-2-1 [102 kB] 470s Get:359 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgbuild all 1.4.4-1 [212 kB] 470s Get:360 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgload all 1.4.0-1 [247 kB] 470s Get:361 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-polyclip amd64 1.10-7-1 [116 kB] 470s Get:362 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 470s Get:363 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 470s Get:364 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.oo all 1.26.0-1 [955 kB] 470s Get:365 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.utils all 2.12.3-1 [1386 kB] 470s Get:366 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rann amd64 2.6.2-1 [46.3 kB] 470s Get:367 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppannoy amd64 0.0.22-1 [235 kB] 470s Get:368 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1428 kB] 470s Get:369 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpphnsw amd64 0.5.0+ds-1 [171 kB] 470s Get:370 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppprogress all 0.4.2-2build1 [22.0 kB] 470s Get:371 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rocr all 1.0-11-3 [456 kB] 470s Get:372 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rspectra amd64 0.16-2-1 [448 kB] 470s Get:373 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rsvd all 1.0.5-1 [3589 kB] 470s Get:374 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rtsne amd64 0.17-1 [109 kB] 470s Get:375 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scattermore amd64 1.2-1 [331 kB] 470s Get:376 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sctransform amd64 0.4.1-1 [504 kB] 470s Get:377 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sp amd64 1:2.1-4+dfsg-1 [1472 kB] 470s Get:378 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spam amd64 2.11-0-1 [2758 kB] 470s Get:379 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-seuratobject amd64 5.0.2-1 [1744 kB] 470s Get:380 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.utils amd64 3.1-0-1 [381 kB] 470s Get:381 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.data all 3.1-2-1 [4039 kB] 470s Get:382 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.geom amd64 3.2-9-2 [3946 kB] 470s Get:383 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.random amd64 3.2-3-1 [1169 kB] 470s Get:384 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tensor all 1.5-4 [15.7 kB] 470s Get:385 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.sparse amd64 3.0-3-1 [215 kB] 470s Get:386 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.explore amd64 3.2-7-1 [3432 kB] 470s Get:387 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-uwot amd64 0.2.2-1 [947 kB] 470s Get:388 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-seurat amd64 5.1.0-1 [3255 kB] 471s Get:389 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-waldo all 0.6.1-1 [150 kB] 471s Get:390 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-testthat amd64 3.2.1.1-1 [1636 kB] 471s Get:391 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vgam amd64 1.1-11-1 [7726 kB] 472s Preconfiguring packages ... 472s Fetched 458 MB in 18s (25.6 MB/s) 472s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75824 files and directories currently installed.) 472s Preparing to unpack .../gcc-14-base_14.2.0-13ubuntu1_amd64.deb ... 472s Unpacking gcc-14-base:amd64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 472s Setting up gcc-14-base:amd64 (14.2.0-13ubuntu1) ... 472s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75824 files and directories currently installed.) 472s Preparing to unpack .../libstdc++6_14.2.0-13ubuntu1_amd64.deb ... 472s Unpacking libstdc++6:amd64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 472s Setting up libstdc++6:amd64 (14.2.0-13ubuntu1) ... 472s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75824 files and directories currently installed.) 472s Preparing to unpack .../libatomic1_14.2.0-13ubuntu1_amd64.deb ... 472s Unpacking libatomic1:amd64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 472s Preparing to unpack .../libgcc-s1_14.2.0-13ubuntu1_amd64.deb ... 472s Unpacking libgcc-s1:amd64 (14.2.0-13ubuntu1) over (14.2.0-12ubuntu1) ... 472s Setting up libgcc-s1:amd64 (14.2.0-13ubuntu1) ... 472s (Reading database ... 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previously unselected package libubsan1:amd64. 473s Preparing to unpack .../013-libubsan1_14.2.0-13ubuntu1_amd64.deb ... 473s Unpacking libubsan1:amd64 (14.2.0-13ubuntu1) ... 473s Selecting previously unselected package libhwasan0:amd64. 473s Preparing to unpack .../014-libhwasan0_14.2.0-13ubuntu1_amd64.deb ... 473s Unpacking libhwasan0:amd64 (14.2.0-13ubuntu1) ... 473s Selecting previously unselected package libquadmath0:amd64. 473s Preparing to unpack .../015-libquadmath0_14.2.0-13ubuntu1_amd64.deb ... 473s Unpacking libquadmath0:amd64 (14.2.0-13ubuntu1) ... 473s Selecting previously unselected package libgcc-14-dev:amd64. 473s Preparing to unpack .../016-libgcc-14-dev_14.2.0-13ubuntu1_amd64.deb ... 473s Unpacking libgcc-14-dev:amd64 (14.2.0-13ubuntu1) ... 473s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 473s Preparing to unpack .../017-gcc-14-x86-64-linux-gnu_14.2.0-13ubuntu1_amd64.deb ... 473s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-13ubuntu1) ... 474s 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unselected package g++-14. 474s Preparing to unpack .../023-g++-14_14.2.0-13ubuntu1_amd64.deb ... 474s Unpacking g++-14 (14.2.0-13ubuntu1) ... 474s Selecting previously unselected package g++-x86-64-linux-gnu. 474s Preparing to unpack .../024-g++-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 474s Unpacking g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 474s Selecting previously unselected package g++. 474s Preparing to unpack .../025-g++_4%3a14.1.0-2ubuntu1_amd64.deb ... 474s Unpacking g++ (4:14.1.0-2ubuntu1) ... 474s Selecting previously unselected package build-essential. 474s Preparing to unpack .../026-build-essential_12.10ubuntu1_amd64.deb ... 474s Unpacking build-essential (12.10ubuntu1) ... 474s Selecting previously unselected package dctrl-tools. 474s Preparing to unpack .../027-dctrl-tools_2.24-3build3_amd64.deb ... 474s Unpacking dctrl-tools (2.24-3build3) ... 474s Selecting previously unselected package fonts-dejavu-mono. 474s Preparing to unpack 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.../033-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 474s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 474s Selecting previously unselected package fonts-glyphicons-halflings. 474s Preparing to unpack .../034-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 474s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 474s Selecting previously unselected package fonts-mathjax. 474s Preparing to unpack .../035-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 474s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 474s Selecting previously unselected package libgfortran5:amd64. 474s Preparing to unpack .../036-libgfortran5_14.2.0-13ubuntu1_amd64.deb ... 474s Unpacking libgfortran5:amd64 (14.2.0-13ubuntu1) ... 474s Selecting previously unselected package libgfortran-14-dev:amd64. 474s Preparing to unpack .../037-libgfortran-14-dev_14.2.0-13ubuntu1_amd64.deb ... 474s Unpacking libgfortran-14-dev:amd64 (14.2.0-13ubuntu1) ... 474s Selecting previously unselected package gfortran-14-x86-64-linux-gnu. 474s Preparing to unpack .../038-gfortran-14-x86-64-linux-gnu_14.2.0-13ubuntu1_amd64.deb ... 474s Unpacking gfortran-14-x86-64-linux-gnu (14.2.0-13ubuntu1) ... 475s Selecting previously unselected package gfortran-14. 475s Preparing to unpack .../039-gfortran-14_14.2.0-13ubuntu1_amd64.deb ... 475s Unpacking gfortran-14 (14.2.0-13ubuntu1) ... 475s Selecting previously unselected package gfortran-x86-64-linux-gnu. 475s Preparing to unpack .../040-gfortran-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 475s Unpacking gfortran-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 475s Selecting previously unselected package gfortran. 475s Preparing to unpack .../041-gfortran_4%3a14.1.0-2ubuntu1_amd64.deb ... 475s Unpacking gfortran (4:14.1.0-2ubuntu1) ... 475s Selecting previously unselected package icu-devtools. 475s Preparing to unpack .../042-icu-devtools_76.1-1ubuntu2_amd64.deb ... 475s Unpacking icu-devtools (76.1-1ubuntu2) ... 475s Selecting previously unselected package javascript-common. 475s Preparing to unpack .../043-javascript-common_11+nmu1_all.deb ... 475s Unpacking javascript-common (11+nmu1) ... 475s Selecting previously unselected package libsuitesparseconfig7:amd64. 475s Preparing to unpack .../044-libsuitesparseconfig7_1%3a7.8.3+dfsg-2_amd64.deb ... 475s Unpacking libsuitesparseconfig7:amd64 (1:7.8.3+dfsg-2) ... 475s Selecting previously unselected package libamd3:amd64. 475s Preparing to unpack .../045-libamd3_1%3a7.8.3+dfsg-2_amd64.deb ... 475s Unpacking libamd3:amd64 (1:7.8.3+dfsg-2) ... 475s Selecting previously unselected package libblas3:amd64. 475s Preparing to unpack .../046-libblas3_3.12.0-4_amd64.deb ... 475s Unpacking libblas3:amd64 (3.12.0-4) ... 475s Selecting previously unselected package libblas-dev:amd64. 475s Preparing to unpack .../047-libblas-dev_3.12.0-4_amd64.deb ... 475s Unpacking libblas-dev:amd64 (3.12.0-4) ... 475s Selecting previously unselected package libboost1.83-dev:amd64. 475s Preparing to unpack .../048-libboost1.83-dev_1.83.0-4ubuntu2_amd64.deb ... 475s Unpacking libboost1.83-dev:amd64 (1.83.0-4ubuntu2) ... 477s Selecting previously unselected package libboost-dev:amd64. 477s Preparing to unpack .../049-libboost-dev_1.83.0.2ubuntu1_amd64.deb ... 477s Unpacking libboost-dev:amd64 (1.83.0.2ubuntu1) ... 477s Selecting previously unselected package libbz2-dev:amd64. 477s Preparing to unpack .../050-libbz2-dev_1.0.8-6_amd64.deb ... 477s Unpacking libbz2-dev:amd64 (1.0.8-6) ... 477s Selecting previously unselected package libpixman-1-0:amd64. 477s Preparing to unpack .../051-libpixman-1-0_0.44.0-3_amd64.deb ... 477s Unpacking libpixman-1-0:amd64 (0.44.0-3) ... 477s Selecting previously unselected package libxcb-render0:amd64. 477s Preparing to unpack .../052-libxcb-render0_1.17.0-2_amd64.deb ... 477s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 477s Selecting previously unselected package libxcb-shm0:amd64. 477s Preparing to unpack .../053-libxcb-shm0_1.17.0-2_amd64.deb ... 477s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 477s Selecting previously unselected package libxrender1:amd64. 477s Preparing to unpack .../054-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 477s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 477s Selecting previously unselected package libcairo2:amd64. 477s Preparing to unpack .../055-libcairo2_1.18.2-2_amd64.deb ... 477s Unpacking libcairo2:amd64 (1.18.2-2) ... 477s Selecting previously unselected package libcolamd3:amd64. 477s Preparing to unpack .../056-libcolamd3_1%3a7.8.3+dfsg-2_amd64.deb ... 477s Unpacking libcolamd3:amd64 (1:7.8.3+dfsg-2) ... 477s Selecting previously unselected package libdatrie1:amd64. 477s Preparing to unpack .../057-libdatrie1_0.2.13-3build1_amd64.deb ... 477s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 477s Selecting previously unselected package libdeflate0:amd64. 477s Preparing to unpack .../058-libdeflate0_1.23-1_amd64.deb ... 477s Unpacking libdeflate0:amd64 (1.23-1) ... 477s Selecting previously unselected package libdeflate-dev:amd64. 477s Preparing to unpack .../059-libdeflate-dev_1.23-1_amd64.deb ... 477s Unpacking libdeflate-dev:amd64 (1.23-1) ... 478s Selecting previously unselected package libfftw3-double3:amd64. 478s Preparing to unpack .../060-libfftw3-double3_3.3.10-2fakesync1build1_amd64.deb ... 478s Unpacking libfftw3-double3:amd64 (3.3.10-2fakesync1build1) ... 478s Selecting previously unselected package libltdl7:amd64. 478s Preparing to unpack .../061-libltdl7_2.5.4-2_amd64.deb ... 478s Unpacking libltdl7:amd64 (2.5.4-2) ... 478s Selecting previously unselected package libglpk40:amd64. 478s Preparing to unpack .../062-libglpk40_5.0-1build2_amd64.deb ... 478s Unpacking libglpk40:amd64 (5.0-1build2) ... 478s Selecting previously unselected package libgraphite2-3:amd64. 478s Preparing to unpack .../063-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 478s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 478s Selecting previously unselected package libharfbuzz0b:amd64. 478s Preparing to unpack .../064-libharfbuzz0b_10.2.0-1_amd64.deb ... 478s Unpacking libharfbuzz0b:amd64 (10.2.0-1) ... 478s Selecting previously unselected package x11-common. 478s Preparing to unpack .../065-x11-common_1%3a7.7+23ubuntu3_all.deb ... 478s Unpacking x11-common (1:7.7+23ubuntu3) ... 478s Selecting previously unselected package libice6:amd64. 478s Preparing to unpack .../066-libice6_2%3a1.1.1-1_amd64.deb ... 478s Unpacking libice6:amd64 (2:1.1.1-1) ... 478s Selecting previously unselected package libicu-dev:amd64. 478s Preparing to unpack .../067-libicu-dev_76.1-1ubuntu2_amd64.deb ... 478s Unpacking libicu-dev:amd64 (76.1-1ubuntu2) ... 478s Selecting previously unselected package libjpeg-turbo8:amd64. 478s Preparing to unpack .../068-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ... 478s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 478s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 478s Preparing to unpack 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package libjs-jquery-datatables. 479s Preparing to unpack .../080-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 479s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 479s Selecting previously unselected package libjs-sifter.js. 479s Preparing to unpack .../081-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 479s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 479s Selecting previously unselected package libjs-microplugin.js. 479s Preparing to unpack .../082-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 479s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 479s Selecting previously unselected package libjs-jquery-selectize.js. 479s Preparing to unpack .../083-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 479s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 479s Selecting previously unselected package libjs-jquery-ui. 479s Preparing to unpack .../084-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 479s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 479s Selecting previously unselected package libjs-json. 479s Preparing to unpack .../085-libjs-json_0~20221030+~1.0.8-1_all.deb ... 479s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 479s Selecting previously unselected package libjs-prettify. 479s Preparing to unpack .../086-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 479s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 479s Selecting previously unselected package liblapack3:amd64. 479s Preparing to unpack .../087-liblapack3_3.12.0-4_amd64.deb ... 479s Unpacking liblapack3:amd64 (3.12.0-4) ... 479s Selecting previously unselected package liblapack-dev:amd64. 479s Preparing to unpack .../088-liblapack-dev_3.12.0-4_amd64.deb ... 479s Unpacking liblapack-dev:amd64 (3.12.0-4) ... 479s Selecting previously unselected package liblerc4:amd64. 479s Preparing to unpack .../089-liblerc4_4.0.0+ds-5ubuntu1_amd64.deb ... 479s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 479s Selecting previously unselected package liblua5.4-0:amd64. 479s Preparing to unpack .../090-liblua5.4-0_5.4.7-1_amd64.deb ... 479s Unpacking liblua5.4-0:amd64 (5.4.7-1) ... 479s Selecting previously unselected package libncurses-dev:amd64. 479s Preparing to unpack .../091-libncurses-dev_6.5-2_amd64.deb ... 479s Unpacking libncurses-dev:amd64 (6.5-2) ... 479s Selecting previously unselected package libthai-data. 479s Preparing to unpack .../092-libthai-data_0.1.29-2build1_all.deb ... 479s Unpacking libthai-data (0.1.29-2build1) ... 479s Selecting previously unselected package libthai0:amd64. 479s Preparing to unpack .../093-libthai0_0.1.29-2build1_amd64.deb ... 479s Unpacking libthai0:amd64 (0.1.29-2build1) ... 479s Selecting previously unselected package libpango-1.0-0:amd64. 479s Preparing to unpack .../094-libpango-1.0-0_1.56.0-3_amd64.deb ... 479s Unpacking libpango-1.0-0:amd64 (1.56.0-3) ... 479s Selecting previously unselected package libpangoft2-1.0-0:amd64. 479s Preparing to unpack .../095-libpangoft2-1.0-0_1.56.0-3_amd64.deb ... 479s Unpacking libpangoft2-1.0-0:amd64 (1.56.0-3) ... 479s Selecting previously unselected package libpangocairo-1.0-0:amd64. 479s Preparing to unpack .../096-libpangocairo-1.0-0_1.56.0-3_amd64.deb ... 479s Unpacking libpangocairo-1.0-0:amd64 (1.56.0-3) ... 479s Selecting previously unselected package libpaper2:amd64. 479s Preparing to unpack .../097-libpaper2_2.2.5-0.3_amd64.deb ... 479s Unpacking libpaper2:amd64 (2.2.5-0.3) ... 479s Selecting previously unselected package libpaper-utils. 479s Preparing to unpack .../098-libpaper-utils_2.2.5-0.3_amd64.deb ... 479s Unpacking libpaper-utils (2.2.5-0.3) ... 480s Selecting previously unselected package libpcre2-16-0:amd64. 480s Preparing to unpack .../099-libpcre2-16-0_10.42-4ubuntu3_amd64.deb ... 480s Unpacking libpcre2-16-0:amd64 (10.42-4ubuntu3) ... 480s Selecting previously unselected package libpcre2-32-0:amd64. 480s Preparing to unpack .../100-libpcre2-32-0_10.42-4ubuntu3_amd64.deb ... 480s Unpacking libpcre2-32-0:amd64 (10.42-4ubuntu3) ... 480s Selecting previously unselected package libpcre2-posix3:amd64. 480s Preparing to unpack .../101-libpcre2-posix3_10.42-4ubuntu3_amd64.deb ... 480s Unpacking libpcre2-posix3:amd64 (10.42-4ubuntu3) ... 480s Selecting previously unselected package libpcre2-dev:amd64. 480s Preparing to unpack .../102-libpcre2-dev_10.42-4ubuntu3_amd64.deb ... 480s Unpacking libpcre2-dev:amd64 (10.42-4ubuntu3) ... 480s Selecting previously unselected package libpkgconf3:amd64. 480s Preparing to unpack .../103-libpkgconf3_1.8.1-4_amd64.deb ... 480s Unpacking libpkgconf3:amd64 (1.8.1-4) ... 480s Selecting previously unselected package zlib1g-dev:amd64. 480s Preparing to unpack .../104-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ... 480s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 480s Selecting previously unselected package libpng-dev:amd64. 480s Preparing to unpack .../105-libpng-dev_1.6.45-1_amd64.deb ... 480s Unpacking libpng-dev:amd64 (1.6.45-1) ... 480s Selecting previously unselected package libreadline-dev:amd64. 480s Preparing to unpack .../106-libreadline-dev_8.2-6_amd64.deb ... 480s Unpacking libreadline-dev:amd64 (8.2-6) ... 480s Selecting previously unselected package libsharpyuv0:amd64. 480s Preparing to unpack .../107-libsharpyuv0_1.5.0-0.1_amd64.deb ... 480s Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ... 480s Selecting previously unselected package libsm6:amd64. 480s Preparing to unpack .../108-libsm6_2%3a1.2.4-1_amd64.deb ... 480s Unpacking libsm6:amd64 (2:1.2.4-1) ... 480s Selecting previously unselected package libtcl8.6:amd64. 480s Preparing to unpack .../109-libtcl8.6_8.6.16+dfsg-1_amd64.deb ... 480s Unpacking libtcl8.6:amd64 (8.6.16+dfsg-1) ... 480s Selecting previously unselected package libjbig0:amd64. 480s Preparing to unpack .../110-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 480s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 480s Selecting previously unselected package libwebp7:amd64. 480s Preparing to unpack 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(1:1.2.1-1.2build1) ... 480s Selecting previously unselected package zip. 480s Preparing to unpack .../117-zip_3.0-14ubuntu1_amd64.deb ... 480s Unpacking zip (3.0-14ubuntu1) ... 480s Selecting previously unselected package unzip. 480s Preparing to unpack .../118-unzip_6.0-28ubuntu6_amd64.deb ... 480s Unpacking unzip (6.0-28ubuntu6) ... 480s Selecting previously unselected package xdg-utils. 480s Preparing to unpack .../119-xdg-utils_1.2.1-0ubuntu1_all.deb ... 480s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 480s Selecting previously unselected package r-base-core. 480s Preparing to unpack .../120-r-base-core_4.4.2-1build1_amd64.deb ... 480s Unpacking r-base-core (4.4.2-1build1) ... 481s Selecting previously unselected package r-cran-littler. 481s Preparing to unpack .../121-r-cran-littler_0.3.20-2_amd64.deb ... 481s Unpacking r-cran-littler (0.3.20-2) ... 481s Selecting previously unselected package littler. 481s Preparing to unpack .../122-littler_0.3.20-2_all.deb ... 481s Unpacking littler (0.3.20-2) ... 481s Selecting previously unselected package node-bootstrap-sass. 481s Preparing to unpack .../123-node-bootstrap-sass_3.4.3-2_all.deb ... 481s Unpacking node-bootstrap-sass (3.4.3-2) ... 481s Selecting previously unselected package node-html5shiv. 481s Preparing to unpack .../124-node-html5shiv_3.7.3+dfsg-5_all.deb ... 481s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 481s Selecting previously unselected package node-normalize.css. 481s Preparing to unpack .../125-node-normalize.css_8.0.1-5_all.deb ... 481s Unpacking node-normalize.css (8.0.1-5) ... 481s Selecting previously unselected package pandoc-data. 481s Preparing to unpack .../126-pandoc-data_3.1.11.1-3build1_all.deb ... 481s Unpacking pandoc-data (3.1.11.1-3build1) ... 481s Selecting previously unselected package pandoc. 481s Preparing to unpack .../127-pandoc_3.1.11.1+ds-2_amd64.deb ... 481s Unpacking pandoc (3.1.11.1+ds-2) ... 482s Selecting previously unselected package liblzma-dev:amd64. 482s 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unpack .../139-r-cran-lambda.r_1.2.4-2build1_all.deb ... 482s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 482s Selecting previously unselected package r-cran-futile.options. 482s Preparing to unpack .../140-r-cran-futile.options_1.0.1-3build1_all.deb ... 482s Unpacking r-cran-futile.options (1.0.1-3build1) ... 482s Selecting previously unselected package r-cran-futile.logger. 482s Preparing to unpack .../141-r-cran-futile.logger_1.4.3-4build1_all.deb ... 482s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 483s Selecting previously unselected package r-cran-snow. 483s Preparing to unpack .../142-r-cran-snow_1%3a0.4.4-2_all.deb ... 483s Unpacking r-cran-snow (1:0.4.4-2) ... 483s Selecting previously unselected package r-cran-codetools. 483s Preparing to unpack .../143-r-cran-codetools_0.2-20-1_all.deb ... 483s Unpacking r-cran-codetools (0.2-20-1) ... 483s Selecting previously unselected package r-cran-bh. 483s Preparing to unpack .../144-r-cran-bh_1.84.0-1_all.deb ... 483s Unpacking r-cran-bh (1.84.0-1) ... 483s Selecting previously unselected package r-cran-cpp11. 483s Preparing to unpack .../145-r-cran-cpp11_0.5.0-1_all.deb ... 483s Unpacking r-cran-cpp11 (0.5.0-1) ... 483s Selecting previously unselected package r-bioc-biocparallel. 483s Preparing to unpack .../146-r-bioc-biocparallel_1.40.0-2_amd64.deb ... 483s Unpacking r-bioc-biocparallel (1.40.0-2) ... 483s Selecting previously unselected package r-bioc-iranges. 483s Preparing to unpack .../147-r-bioc-iranges_2.40.1-2_amd64.deb ... 483s Unpacking r-bioc-iranges (2.40.1-2) ... 483s Selecting previously unselected package r-bioc-zlibbioc. 483s Preparing to unpack .../148-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 483s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 483s Selecting previously unselected package r-bioc-xvector. 483s Preparing to unpack .../149-r-bioc-xvector_0.46.0-2_amd64.deb ... 483s Unpacking r-bioc-xvector (0.46.0-2) ... 483s Selecting previously unselected package r-cran-curl. 483s Preparing to unpack .../150-r-cran-curl_5.2.3+dfsg-1ubuntu1_amd64.deb ... 483s Unpacking r-cran-curl (5.2.3+dfsg-1ubuntu1) ... 483s Selecting previously unselected package r-cran-jsonlite. 483s Preparing to unpack .../151-r-cran-jsonlite_1.8.9+dfsg-1_amd64.deb ... 483s Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ... 483s Selecting previously unselected package r-cran-mime. 483s Preparing to unpack .../152-r-cran-mime_0.12-2_amd64.deb ... 483s Unpacking r-cran-mime (0.12-2) ... 483s Selecting previously unselected package r-cran-sys. 483s Preparing to unpack .../153-r-cran-sys_3.4.3-1_amd64.deb ... 483s Unpacking r-cran-sys (3.4.3-1) ... 483s Selecting previously unselected package r-cran-askpass. 483s Preparing to unpack .../154-r-cran-askpass_1.2.1-1_amd64.deb ... 483s Unpacking r-cran-askpass (1.2.1-1) ... 483s Selecting previously unselected package r-cran-openssl. 483s Preparing to unpack .../155-r-cran-openssl_2.2.0+dfsg-1_amd64.deb ... 483s Unpacking r-cran-openssl (2.2.0+dfsg-1) ... 483s Selecting previously unselected package r-cran-r6. 483s Preparing to unpack .../156-r-cran-r6_2.5.1-1_all.deb ... 483s Unpacking r-cran-r6 (2.5.1-1) ... 483s Selecting previously unselected package r-cran-httr. 483s Preparing to unpack .../157-r-cran-httr_1.4.7+dfsg-1_all.deb ... 483s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 483s Selecting previously unselected package r-bioc-ucsc.utils. 483s Preparing to unpack .../158-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 483s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 483s Selecting previously unselected package r-bioc-genomeinfodbdata. 483s Preparing to unpack .../159-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 483s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 483s Selecting previously unselected package r-bioc-genomeinfodb. 483s Preparing to unpack .../160-r-bioc-genomeinfodb_1.42.1+dfsg-2_all.deb ... 483s Unpacking r-bioc-genomeinfodb (1.42.1+dfsg-2) ... 483s Selecting previously unselected package r-cran-crayon. 483s Preparing to unpack .../161-r-cran-crayon_1.5.2-1_all.deb ... 483s Unpacking r-cran-crayon (1.5.2-1) ... 483s Selecting previously unselected package r-bioc-biostrings. 483s Preparing to unpack .../162-r-bioc-biostrings_2.74.1+dfsg-2_amd64.deb ... 483s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 484s Selecting previously unselected package r-cran-lattice. 484s Preparing to unpack .../163-r-cran-lattice_0.22-6-1_amd64.deb ... 484s Unpacking r-cran-lattice (0.22-6-1) ... 484s Selecting previously unselected package r-cran-matrix. 484s Preparing to unpack .../164-r-cran-matrix_1.7-1-1_amd64.deb ... 484s Unpacking r-cran-matrix (1.7-1-1) ... 484s Selecting previously unselected package r-cran-matrixstats. 484s Preparing to unpack .../165-r-cran-matrixstats_1.4.1-1_amd64.deb ... 484s Unpacking r-cran-matrixstats (1.4.1-1) ... 484s Selecting previously unselected package r-bioc-matrixgenerics. 484s Preparing to unpack .../166-r-bioc-matrixgenerics_1.18.0-2_all.deb ... 484s Unpacking r-bioc-matrixgenerics (1.18.0-2) ... 484s Selecting previously unselected package r-cran-abind. 484s Preparing to unpack .../167-r-cran-abind_1.4-8-1_all.deb ... 484s Unpacking r-cran-abind (1.4-8-1) ... 484s Selecting previously unselected package r-bioc-s4arrays. 484s Preparing to unpack .../168-r-bioc-s4arrays_1.6.0+dfsg-2_amd64.deb ... 484s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 484s Selecting previously unselected package r-bioc-sparsearray. 484s Preparing to unpack .../169-r-bioc-sparsearray_1.6.0+dfsg-2_amd64.deb ... 484s Unpacking r-bioc-sparsearray (1.6.0+dfsg-2) ... 484s Selecting previously unselected package r-bioc-delayedarray. 484s Preparing to unpack .../170-r-bioc-delayedarray_0.32.0+dfsg-2_amd64.deb ... 484s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 484s Selecting previously unselected package r-bioc-genomicranges. 484s Preparing to unpack .../171-r-bioc-genomicranges_1.58.0+dfsg-2_amd64.deb ... 484s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 484s Selecting previously unselected package r-bioc-summarizedexperiment. 484s Preparing to unpack .../172-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 484s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 484s Selecting previously unselected package r-cran-locfit. 484s Preparing to unpack .../173-r-cran-locfit_1.5-9.10-1_amd64.deb ... 484s Unpacking r-cran-locfit (1.5-9.10-1) ... 484s Selecting previously unselected package r-cran-cli. 484s Preparing to unpack .../174-r-cran-cli_3.6.3-1_amd64.deb ... 484s Unpacking r-cran-cli (3.6.3-1) ... 484s Selecting previously unselected package r-cran-glue. 484s Preparing to unpack .../175-r-cran-glue_1.8.0-1_amd64.deb ... 484s Unpacking r-cran-glue (1.8.0-1) ... 484s Selecting previously unselected package r-cran-rlang. 484s Preparing to unpack .../176-r-cran-rlang_1.1.4-1_amd64.deb ... 484s Unpacking r-cran-rlang (1.1.4-1) ... 484s Selecting previously unselected package r-cran-lifecycle. 484s Preparing to unpack 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package r-cran-farver. 485s Preparing to unpack .../183-r-cran-farver_2.1.2-1_amd64.deb ... 485s Unpacking r-cran-farver (2.1.2-1) ... 485s Selecting previously unselected package r-cran-labeling. 485s Preparing to unpack .../184-r-cran-labeling_0.4.3-1_all.deb ... 485s Unpacking r-cran-labeling (0.4.3-1) ... 485s Selecting previously unselected package r-cran-colorspace. 485s Preparing to unpack .../185-r-cran-colorspace_2.1-1+dfsg-1_amd64.deb ... 485s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 485s Selecting previously unselected package r-cran-munsell. 485s Preparing to unpack .../186-r-cran-munsell_0.5.1-1_all.deb ... 485s Unpacking r-cran-munsell (0.5.1-1) ... 485s Selecting previously unselected package r-cran-rcolorbrewer. 485s Preparing to unpack .../187-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 485s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 485s Selecting previously unselected package r-cran-viridislite. 485s Preparing to unpack .../188-r-cran-viridislite_0.4.2-2_all.deb ... 485s Unpacking r-cran-viridislite (0.4.2-2) ... 485s Selecting previously unselected package r-cran-scales. 485s Preparing to unpack .../189-r-cran-scales_1.3.0-1_all.deb ... 485s Unpacking r-cran-scales (1.3.0-1) ... 485s Selecting previously unselected package r-cran-fansi. 485s Preparing to unpack .../190-r-cran-fansi_1.0.5-1_amd64.deb ... 485s Unpacking r-cran-fansi (1.0.5-1) ... 485s Selecting previously unselected package r-cran-magrittr. 485s Preparing to unpack .../191-r-cran-magrittr_2.0.3-1_amd64.deb ... 485s Unpacking r-cran-magrittr (2.0.3-1) ... 485s Selecting previously unselected package r-cran-utf8. 485s Preparing to unpack .../192-r-cran-utf8_1.2.4-1_amd64.deb ... 485s Unpacking r-cran-utf8 (1.2.4-1) ... 485s Selecting previously unselected package r-cran-vctrs. 485s Preparing to unpack .../193-r-cran-vctrs_0.6.5-1_amd64.deb ... 485s Unpacking r-cran-vctrs (0.6.5-1) ... 485s Selecting previously unselected package r-cran-pillar. 485s Preparing to unpack .../194-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 485s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 485s Selecting previously unselected package r-cran-pkgconfig. 485s Preparing to unpack .../195-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 485s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 485s Selecting previously unselected package r-cran-tibble. 485s Preparing to unpack .../196-r-cran-tibble_3.2.1+dfsg-2_amd64.deb ... 485s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 485s Selecting previously unselected package r-cran-withr. 485s Preparing to unpack .../197-r-cran-withr_3.0.2+dfsg-1_all.deb ... 485s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 485s Selecting previously unselected package r-cran-ggplot2. 485s Preparing to unpack .../198-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 485s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 485s Selecting previously unselected package r-cran-pkgkitten. 485s Preparing to unpack .../199-r-cran-pkgkitten_0.2.4-1_all.deb ... 485s Unpacking r-cran-pkgkitten (0.2.4-1) ... 485s Selecting previously unselected package r-cran-rcpp. 485s Preparing to unpack .../200-r-cran-rcpp_1.0.14-1_amd64.deb ... 485s Unpacking r-cran-rcpp (1.0.14-1) ... 485s Selecting previously unselected package r-cran-rcpparmadillo. 485s Preparing to unpack .../201-r-cran-rcpparmadillo_14.2.2-1-1_amd64.deb ... 485s Unpacking r-cran-rcpparmadillo (14.2.2-1-1) ... 486s Selecting previously unselected package r-bioc-deseq2. 486s Preparing to unpack .../202-r-bioc-deseq2_1.46.0+dfsg-2_amd64.deb ... 486s Unpacking r-bioc-deseq2 (1.46.0+dfsg-2) ... 486s Selecting previously unselected package r-cran-bitops. 486s Preparing to unpack .../203-r-cran-bitops_1.0-8-1_amd64.deb ... 486s Unpacking r-cran-bitops (1.0-8-1) ... 486s Selecting previously unselected package r-bioc-rhtslib. 486s Preparing to unpack .../204-r-bioc-rhtslib_3.2.0+dfsg-2_amd64.deb ... 486s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 486s Selecting previously unselected package r-bioc-rsamtools. 486s Preparing to unpack .../205-r-bioc-rsamtools_2.22.0+dfsg-2_amd64.deb ... 486s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 486s Selecting previously unselected package r-bioc-genomicalignments. 486s Preparing to unpack .../206-r-bioc-genomicalignments_1.42.0-2_amd64.deb ... 486s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 486s Selecting previously unselected package r-cran-statmod. 486s Preparing to unpack .../207-r-cran-statmod_1.5.0-1_amd64.deb ... 486s Unpacking r-cran-statmod (1.5.0-1) ... 486s Selecting previously unselected package r-bioc-limma. 486s Preparing to unpack .../208-r-bioc-limma_3.62.2+dfsg-1_amd64.deb ... 486s Unpacking r-bioc-limma (3.62.2+dfsg-1) ... 486s Selecting previously unselected package r-cran-survival. 486s Preparing to unpack .../209-r-cran-survival_3.8-3-1_amd64.deb ... 486s Unpacking r-cran-survival (3.8-3-1) ... 486s Selecting previously unselected package r-bioc-multtest. 486s Preparing to unpack .../210-r-bioc-multtest_2.62.0-2_amd64.deb ... 486s Unpacking r-bioc-multtest (2.62.0-2) ... 486s Selecting previously unselected package r-cran-xml. 486s Preparing to unpack .../211-r-cran-xml_3.99-0.18-1_amd64.deb ... 486s Unpacking r-cran-xml (3.99-0.18-1) ... 486s Selecting previously unselected package r-cran-rcurl. 486s Preparing to unpack .../212-r-cran-rcurl_1.98-1.16+dfsg-1_amd64.deb ... 486s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 486s Selecting previously unselected package r-cran-rjson. 486s Preparing to unpack .../213-r-cran-rjson_0.2.23-1_amd64.deb ... 486s Unpacking r-cran-rjson (0.2.23-1) ... 486s Selecting previously unselected package r-cran-yaml. 486s Preparing to unpack .../214-r-cran-yaml_2.3.10-1_amd64.deb ... 486s Unpacking r-cran-yaml (2.3.10-1) ... 486s Selecting previously unselected package r-cran-restfulr. 486s Preparing to unpack .../215-r-cran-restfulr_0.0.15-1_amd64.deb ... 486s Unpacking r-cran-restfulr (0.0.15-1) ... 486s Selecting previously unselected package r-bioc-rtracklayer. 486s Preparing to unpack .../216-r-bioc-rtracklayer_1.66.0-2_amd64.deb ... 486s Unpacking r-bioc-rtracklayer (1.66.0-2) ... 486s Selecting previously unselected package r-cran-digest. 486s Preparing to unpack .../217-r-cran-digest_0.6.37-1_amd64.deb ... 486s Unpacking r-cran-digest (0.6.37-1) ... 486s Selecting previously unselected package r-cran-ape. 486s Preparing to unpack .../218-r-cran-ape_5.8-1_amd64.deb ... 486s Unpacking r-cran-ape (5.8-1) ... 486s Selecting previously unselected package r-cran-base64enc. 486s Preparing to unpack .../219-r-cran-base64enc_0.1-3-3_amd64.deb ... 486s Unpacking r-cran-base64enc (0.1-3-3) ... 486s Selecting previously unselected package r-cran-brio. 486s Preparing to unpack .../220-r-cran-brio_1.1.5-1_amd64.deb ... 486s Unpacking r-cran-brio (1.1.5-1) ... 486s Selecting previously unselected package r-cran-fastmap. 486s Preparing to unpack .../221-r-cran-fastmap_1.2.0-1_amd64.deb ... 486s Unpacking r-cran-fastmap (1.2.0-1) ... 486s Selecting previously unselected package r-cran-cachem. 486s Preparing to unpack .../222-r-cran-cachem_1.1.0-1_amd64.deb ... 486s Unpacking r-cran-cachem (1.1.0-1) ... 487s Selecting previously unselected package r-cran-htmltools. 487s Preparing to unpack .../223-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 487s Unpacking r-cran-htmltools (0.5.8.1-1) ... 487s Selecting previously unselected package r-cran-jquerylib. 487s Preparing to unpack .../224-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 487s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 487s Selecting previously unselected package r-cran-memoise. 487s Preparing to unpack .../225-r-cran-memoise_2.0.1-1_all.deb ... 487s Unpacking r-cran-memoise (2.0.1-1) ... 487s Selecting previously unselected package r-cran-fs. 487s Preparing to unpack .../226-r-cran-fs_1.6.4+dfsg-1_amd64.deb ... 487s Unpacking r-cran-fs (1.6.4+dfsg-1) ... 487s Selecting previously unselected package r-cran-rappdirs. 487s Preparing to unpack .../227-r-cran-rappdirs_0.3.3-1_amd64.deb ... 487s Unpacking r-cran-rappdirs (0.3.3-1) ... 487s Selecting previously unselected package r-cran-sass. 487s Preparing to unpack .../228-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 487s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 487s Selecting previously unselected package r-cran-bslib. 487s Preparing to unpack .../229-r-cran-bslib_0.7.0+dfsg-1_all.deb ... 487s Unpacking r-cran-bslib (0.7.0+dfsg-1) ... 487s Selecting previously unselected package r-cran-ps. 487s Preparing to unpack .../230-r-cran-ps_1.8.0-1_amd64.deb ... 487s Unpacking r-cran-ps (1.8.0-1) ... 487s Selecting previously unselected package r-cran-processx. 487s Preparing to unpack .../231-r-cran-processx_3.8.4-1_amd64.deb ... 487s Unpacking r-cran-processx (3.8.4-1) ... 487s Selecting previously unselected package r-cran-callr. 487s Preparing to unpack .../232-r-cran-callr_3.7.6-1_all.deb ... 487s Unpacking r-cran-callr (3.7.6-1) ... 487s Selecting previously unselected package r-cran-class. 487s Preparing to unpack .../233-r-cran-class_7.3-23-1_amd64.deb ... 487s Unpacking r-cran-class (7.3-23-1) ... 487s Selecting previously unselected package r-cran-proxy. 487s Preparing to unpack .../234-r-cran-proxy_0.4-27-1_amd64.deb ... 487s Unpacking r-cran-proxy (0.4-27-1) ... 487s Selecting previously unselected package r-cran-e1071. 487s Preparing to unpack .../235-r-cran-e1071_1.7-16-1_amd64.deb ... 487s Unpacking r-cran-e1071 (1.7-16-1) ... 487s Selecting previously unselected package r-cran-iterators. 487s Preparing to unpack .../236-r-cran-iterators_1.0.14-1_all.deb ... 487s Unpacking r-cran-iterators (1.0.14-1) ... 487s Selecting previously unselected package r-cran-foreach. 487s Preparing to unpack .../237-r-cran-foreach_1.5.2-1_all.deb ... 487s Unpacking r-cran-foreach (1.5.2-1) ... 487s Selecting previously unselected package r-cran-data.table. 487s Preparing to unpack .../238-r-cran-data.table_1.16.4+dfsg-1_amd64.deb ... 487s Unpacking r-cran-data.table (1.16.4+dfsg-1) ... 487s Selecting previously unselected package r-cran-modelmetrics. 487s Preparing to unpack .../239-r-cran-modelmetrics_1.2.2.2-1build1_amd64.deb ... 487s Unpacking r-cran-modelmetrics (1.2.2.2-1build1) ... 487s Selecting previously unselected package r-cran-plyr. 487s Preparing to unpack .../240-r-cran-plyr_1.8.9-1_amd64.deb ... 487s Unpacking r-cran-plyr (1.8.9-1) ... 487s Selecting previously unselected package r-cran-proc. 487s Preparing to unpack .../241-r-cran-proc_1.18.5-1_amd64.deb ... 487s Unpacking r-cran-proc (1.18.5-1) ... 487s Selecting previously unselected package r-cran-generics. 487s Preparing to unpack .../242-r-cran-generics_0.1.3-1_all.deb ... 487s Unpacking r-cran-generics (0.1.3-1) ... 487s Selecting previously unselected package r-cran-tidyselect. 487s Preparing to unpack .../243-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ... 487s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 487s Selecting previously unselected package r-cran-dplyr. 487s Preparing to unpack .../244-r-cran-dplyr_1.1.4-4_amd64.deb ... 487s Unpacking r-cran-dplyr (1.1.4-4) ... 488s Selecting previously unselected package r-cran-tzdb. 488s Preparing to unpack .../245-r-cran-tzdb_0.4.0-2_amd64.deb ... 488s Unpacking r-cran-tzdb (0.4.0-2) ... 488s Selecting previously unselected package r-cran-clock. 488s Preparing to unpack .../246-r-cran-clock_0.7.1-1_amd64.deb ... 488s Unpacking r-cran-clock (0.7.1-1) ... 488s Selecting previously unselected package r-cran-gower. 488s Preparing to unpack .../247-r-cran-gower_1.0.1-1_amd64.deb ... 488s Unpacking r-cran-gower (1.0.1-1) ... 488s Selecting previously unselected package r-cran-hardhat. 488s Preparing to unpack .../248-r-cran-hardhat_1.4.0+dfsg-1_all.deb ... 488s Unpacking r-cran-hardhat (1.4.0+dfsg-1) ... 488s Selecting previously unselected package r-cran-rpart. 488s Preparing to unpack .../249-r-cran-rpart_4.1.24-1_amd64.deb ... 488s Unpacking r-cran-rpart (4.1.24-1) ... 488s Selecting previously unselected package r-cran-nnet. 488s Preparing to unpack .../250-r-cran-nnet_7.3-20-1_amd64.deb ... 488s Unpacking r-cran-nnet (7.3-20-1) ... 488s Selecting previously unselected package r-cran-shape. 488s Preparing to unpack .../251-r-cran-shape_1.4.6.1-1_all.deb ... 488s Unpacking r-cran-shape (1.4.6.1-1) ... 488s Selecting previously unselected package r-cran-diagram. 488s Preparing to unpack .../252-r-cran-diagram_1.6.5-2_all.deb ... 488s Unpacking r-cran-diagram (1.6.5-2) ... 488s Selecting previously unselected package r-cran-kernsmooth. 488s Preparing to unpack .../253-r-cran-kernsmooth_2.23-26-1_amd64.deb ... 488s Unpacking r-cran-kernsmooth (2.23-26-1) ... 488s Selecting previously unselected package r-cran-globals. 488s Preparing to unpack .../254-r-cran-globals_0.16.3-1_all.deb ... 488s Unpacking r-cran-globals (0.16.3-1) ... 488s Selecting previously unselected package r-cran-listenv. 488s Preparing to unpack .../255-r-cran-listenv_0.9.1+dfsg-1_all.deb ... 488s Unpacking r-cran-listenv (0.9.1+dfsg-1) ... 488s Selecting previously unselected package r-cran-parallelly. 488s Preparing to unpack .../256-r-cran-parallelly_1.38.0-1_amd64.deb ... 488s Unpacking r-cran-parallelly (1.38.0-1) ... 488s Selecting previously unselected package r-cran-future. 488s Preparing to unpack .../257-r-cran-future_1.34.0+dfsg-1_all.deb ... 488s Unpacking r-cran-future (1.34.0+dfsg-1) ... 488s Selecting previously unselected package r-cran-future.apply. 488s Preparing to unpack .../258-r-cran-future.apply_1.11.2+dfsg-1_all.deb ... 488s Unpacking r-cran-future.apply (1.11.2+dfsg-1) ... 488s Selecting previously unselected package r-cran-numderiv. 488s Preparing to unpack .../259-r-cran-numderiv_2016.8-1.1-3_all.deb ... 488s Unpacking r-cran-numderiv (2016.8-1.1-3) ... 488s Selecting previously unselected package r-cran-progressr. 488s Preparing to unpack .../260-r-cran-progressr_0.14.0-1_all.deb ... 488s Unpacking r-cran-progressr (0.14.0-1) ... 488s Selecting previously unselected package r-cran-squarem. 488s Preparing to unpack .../261-r-cran-squarem_2021.1-1_all.deb ... 488s Unpacking r-cran-squarem (2021.1-1) ... 488s Selecting previously unselected package r-cran-lava. 488s Preparing to unpack .../262-r-cran-lava_1.7.3+dfsg-1_all.deb ... 488s Unpacking r-cran-lava (1.7.3+dfsg-1) ... 488s Selecting previously unselected package r-cran-prodlim. 488s Preparing to unpack .../263-r-cran-prodlim_2024.06.25-1_amd64.deb ... 488s Unpacking r-cran-prodlim (2024.06.25-1) ... 488s Selecting previously unselected package r-cran-ipred. 488s Preparing to unpack .../264-r-cran-ipred_0.9-15-1_amd64.deb ... 488s Unpacking r-cran-ipred (0.9-15-1) ... 488s Selecting previously unselected package r-cran-timechange. 488s Preparing to unpack .../265-r-cran-timechange_0.3.0-1_amd64.deb ... 488s Unpacking r-cran-timechange (0.3.0-1) ... 488s Selecting previously unselected package r-cran-lubridate. 488s Preparing to unpack .../266-r-cran-lubridate_1.9.3+dfsg-1_amd64.deb ... 488s Unpacking r-cran-lubridate (1.9.3+dfsg-1) ... 488s Selecting previously unselected package r-cran-purrr. 488s Preparing to unpack .../267-r-cran-purrr_1.0.2-1_amd64.deb ... 488s Unpacking r-cran-purrr (1.0.2-1) ... 488s Selecting previously unselected package r-cran-stringi. 488s Preparing to unpack .../268-r-cran-stringi_1.8.4-1build1_amd64.deb ... 488s Unpacking r-cran-stringi (1.8.4-1build1) ... 489s Selecting previously unselected package r-cran-stringr. 489s Preparing to unpack .../269-r-cran-stringr_1.5.1-1_all.deb ... 489s Unpacking r-cran-stringr (1.5.1-1) ... 489s Selecting previously unselected package r-cran-tidyr. 489s Preparing to unpack .../270-r-cran-tidyr_1.3.1-1_amd64.deb ... 489s Unpacking r-cran-tidyr (1.3.1-1) ... 489s Selecting previously unselected package r-cran-timedate. 489s Preparing to unpack .../271-r-cran-timedate_4041.110-1_amd64.deb ... 489s Unpacking r-cran-timedate (4041.110-1) ... 489s Selecting previously unselected package r-cran-recipes. 489s Preparing to unpack .../272-r-cran-recipes_1.1.0+dfsg-1_all.deb ... 489s Unpacking r-cran-recipes (1.1.0+dfsg-1) ... 489s Selecting previously unselected package r-cran-reshape2. 489s Preparing to unpack .../273-r-cran-reshape2_1.4.4-2build1_amd64.deb ... 489s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 489s Selecting previously unselected package r-cran-caret. 489s Preparing to unpack .../274-r-cran-caret_6.0-94+dfsg-1_amd64.deb ... 489s Unpacking r-cran-caret (6.0-94+dfsg-1) ... 489s Selecting previously unselected package r-cran-catools. 489s Preparing to unpack .../275-r-cran-catools_1.18.2-1_amd64.deb ... 489s Unpacking r-cran-catools (1.18.2-1) ... 489s Selecting previously unselected package r-cran-cluster. 489s Preparing to unpack .../276-r-cran-cluster_2.1.8-1_amd64.deb ... 489s Unpacking r-cran-cluster (2.1.8-1) ... 489s Selecting previously unselected package r-cran-evaluate. 489s Preparing to unpack .../277-r-cran-evaluate_1.0.0-1_all.deb ... 489s Unpacking r-cran-evaluate (1.0.0-1) ... 489s Selecting previously unselected package r-cran-xfun. 489s Preparing to unpack .../278-r-cran-xfun_0.49+dfsg-1_amd64.deb ... 489s Unpacking r-cran-xfun (0.49+dfsg-1) ... 489s Selecting previously unselected package r-cran-highr. 489s Preparing to unpack .../279-r-cran-highr_0.11+dfsg-1_all.deb ... 489s Unpacking r-cran-highr (0.11+dfsg-1) ... 489s Selecting previously unselected package libjs-mathjax. 489s Preparing to unpack .../280-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 489s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 490s Selecting previously unselected package r-cran-knitr. 490s Preparing to unpack .../281-r-cran-knitr_1.49+dfsg-1_all.deb ... 490s Unpacking r-cran-knitr (1.49+dfsg-1) ... 490s Selecting previously unselected package r-cran-fontawesome. 490s Preparing to unpack .../282-r-cran-fontawesome_0.5.2-1_all.deb ... 490s Unpacking r-cran-fontawesome (0.5.2-1) ... 490s Selecting previously unselected package r-cran-tinytex. 490s Preparing to unpack .../283-r-cran-tinytex_0.53-1_all.deb ... 490s Unpacking r-cran-tinytex (0.53-1) ... 490s Selecting previously unselected package libjs-modernizr. 490s Preparing to unpack .../284-libjs-modernizr_3.13.0-0.1_all.deb ... 490s Unpacking libjs-modernizr (3.13.0-0.1) ... 490s Selecting previously unselected package r-cran-later. 490s Preparing to unpack .../285-r-cran-later_1.3.2+dfsg-1_amd64.deb ... 490s Unpacking r-cran-later (1.3.2+dfsg-1) ... 490s Selecting previously unselected package r-cran-promises. 490s Preparing to unpack .../286-r-cran-promises_1.3.0+dfsg-1_amd64.deb ... 490s Unpacking r-cran-promises (1.3.0+dfsg-1) ... 490s Selecting previously unselected package r-cran-httpuv. 490s Preparing to unpack .../287-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 490s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 490s Selecting previously unselected package r-cran-xtable. 490s Preparing to unpack .../288-r-cran-xtable_1%3a1.8-4-2_all.deb ... 490s Unpacking r-cran-xtable (1:1.8-4-2) ... 490s Selecting previously unselected package r-cran-sourcetools. 490s Preparing to unpack .../289-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 490s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 490s Selecting previously unselected package r-cran-commonmark. 490s Preparing to unpack .../290-r-cran-commonmark_1.9.2-2_amd64.deb ... 490s Unpacking r-cran-commonmark (1.9.2-2) ... 490s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 490s Preparing to unpack .../291-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 490s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 490s Selecting previously unselected package r-cran-shiny. 490s Preparing to unpack .../292-r-cran-shiny_1.9.1+dfsg-1_all.deb ... 490s Unpacking r-cran-shiny (1.9.1+dfsg-1) ... 490s Selecting previously unselected package r-cran-rmarkdown. 490s Preparing to unpack .../293-r-cran-rmarkdown_2.28+dfsg-1_all.deb ... 490s Unpacking r-cran-rmarkdown (2.28+dfsg-1) ... 490s Selecting previously unselected package r-cran-htmlwidgets. 490s Preparing to unpack .../294-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 490s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 490s Selecting previously unselected package r-cran-miniui. 490s Preparing to unpack .../295-r-cran-miniui_0.1.1.1-3build1_all.deb ... 490s Unpacking r-cran-miniui (0.1.1.1-3build1) ... 490s Selecting previously unselected package r-cran-shinyjs. 490s Preparing to unpack .../296-r-cran-shinyjs_2.1.0-1_all.deb ... 490s Unpacking r-cran-shinyjs (2.1.0-1) ... 490s Selecting previously unselected package r-cran-colourpicker. 490s Preparing to unpack .../297-r-cran-colourpicker_1.3.0+dfsg-1_all.deb ... 490s Unpacking r-cran-colourpicker (1.3.0+dfsg-1) ... 490s Selecting previously unselected package r-cran-conquer. 490s Preparing to unpack .../298-r-cran-conquer_1.3.3-1_amd64.deb ... 490s Unpacking r-cran-conquer (1.3.3-1) ... 490s Selecting previously unselected package r-cran-cowplot. 490s Preparing to unpack .../299-r-cran-cowplot_1.1.3+dfsg-1_all.deb ... 490s Unpacking r-cran-cowplot (1.1.3+dfsg-1) ... 490s Selecting previously unselected package r-cran-lazyeval. 491s Preparing to unpack .../300-r-cran-lazyeval_0.2.2-1build1_amd64.deb ... 491s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 491s Selecting previously unselected package r-cran-crosstalk. 491s Preparing to unpack .../301-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 491s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 491s Selecting previously unselected package r-cran-deldir. 491s Preparing to unpack .../302-r-cran-deldir_2.0-4-1build1_amd64.deb ... 491s Unpacking r-cran-deldir (2.0-4-1build1) ... 491s Selecting previously unselected package r-cran-deoptimr. 491s Preparing to unpack .../303-r-cran-deoptimr_1.1-3-1-1_all.deb ... 491s Unpacking r-cran-deoptimr (1.1-3-1-1) ... 491s Selecting previously unselected package r-cran-desc. 491s Preparing to unpack .../304-r-cran-desc_1.4.3-1_all.deb ... 491s Unpacking r-cran-desc (1.4.3-1) ... 491s Selecting previously unselected package r-cran-diffobj. 491s Preparing to unpack .../305-r-cran-diffobj_0.3.5-1_amd64.deb ... 491s Unpacking r-cran-diffobj (0.3.5-1) ... 491s Selecting previously unselected package r-cran-dotcall64. 491s Preparing to unpack .../306-r-cran-dotcall64_1.1-1-1_amd64.deb ... 491s Unpacking r-cran-dotcall64 (1.1-1-1) ... 491s Selecting previously unselected package r-cran-sitmo. 491s Preparing to unpack .../307-r-cran-sitmo_2.0.2-1_amd64.deb ... 491s Unpacking r-cran-sitmo (2.0.2-1) ... 491s Selecting previously unselected package r-cran-dqrng. 491s Preparing to unpack .../308-r-cran-dqrng_0.3.2+dfsg-1_amd64.deb ... 491s Unpacking r-cran-dqrng (0.3.2+dfsg-1) ... 491s Selecting previously unselected package r-cran-fastdummies. 491s Preparing to unpack .../309-r-cran-fastdummies_1.7.4-1_all.deb ... 491s Unpacking r-cran-fastdummies (1.7.4-1) ... 491s Selecting previously unselected package r-cran-fitdistrplus. 491s Preparing to unpack .../310-r-cran-fitdistrplus_1.2-1-1_all.deb ... 491s Unpacking r-cran-fitdistrplus (1.2-1-1) ... 491s Selecting previously unselected package r-cran-fnn. 491s Preparing to unpack .../311-r-cran-fnn_1.1.4.1-1_amd64.deb ... 491s Unpacking r-cran-fnn (1.1.4.1-1) ... 491s Selecting previously unselected package r-cran-gtools. 491s Preparing to unpack .../312-r-cran-gtools_3.9.5-1_amd64.deb ... 491s Unpacking r-cran-gtools (3.9.5-1) ... 491s Selecting previously unselected package r-cran-gdata. 491s Preparing to unpack .../313-r-cran-gdata_3.0.1-1_all.deb ... 491s Unpacking r-cran-gdata (3.0.1-1) ... 491s Selecting previously unselected package r-cran-ggrepel. 491s Preparing to unpack .../314-r-cran-ggrepel_0.9.5-2_amd64.deb ... 491s Unpacking r-cran-ggrepel (0.9.5-2) ... 491s Selecting previously unselected package r-cran-ggridges. 491s Preparing to unpack .../315-r-cran-ggridges_0.5.6-1_all.deb ... 491s Unpacking r-cran-ggridges (0.5.6-1) ... 491s Selecting previously unselected package r-cran-goftest. 491s Preparing to unpack .../316-r-cran-goftest_1.2-3-1_amd64.deb ... 491s Unpacking r-cran-goftest (1.2-3-1) ... 491s Selecting previously unselected package r-cran-gplots. 491s Preparing to unpack .../317-r-cran-gplots_3.2.0-1_all.deb ... 491s Unpacking r-cran-gplots (3.2.0-1) ... 491s Selecting previously unselected package r-cran-gridextra. 491s Preparing to unpack .../318-r-cran-gridextra_2.3-3build1_all.deb ... 491s Unpacking r-cran-gridextra (2.3-3build1) ... 491s Selecting previously unselected package r-cran-rprojroot. 491s Preparing to unpack .../319-r-cran-rprojroot_2.0.4-1_all.deb ... 491s Unpacking r-cran-rprojroot (2.0.4-1) ... 491s Selecting previously unselected package r-cran-here. 491s Preparing to unpack .../320-r-cran-here_1.0.1-2_all.deb ... 491s Unpacking r-cran-here (1.0.1-2) ... 491s Selecting previously unselected package r-cran-ica. 491s Preparing to unpack .../321-r-cran-ica_1.0-3-1_all.deb ... 491s Unpacking r-cran-ica (1.0-3-1) ... 491s Selecting previously unselected package r-cran-igraph. 491s Preparing to unpack .../322-r-cran-igraph_2.0.3-1_amd64.deb ... 491s Unpacking r-cran-igraph (2.0.3-1) ... 492s Selecting previously unselected package r-cran-irlba. 492s Preparing to unpack .../323-r-cran-irlba_2.3.5.1-4_amd64.deb ... 492s Unpacking r-cran-irlba (2.3.5.1-4) ... 492s Selecting previously unselected package r-cran-kernlab. 492s Preparing to unpack .../324-r-cran-kernlab_0.9-33-1_amd64.deb ... 492s Unpacking r-cran-kernlab (0.9-33-1) ... 492s Selecting previously unselected package r-cran-rcpptoml. 492s Preparing to unpack .../325-r-cran-rcpptoml_0.2.2+dfsg-1_amd64.deb ... 492s Unpacking r-cran-rcpptoml (0.2.2+dfsg-1) ... 492s Selecting previously unselected package r-cran-png. 492s Preparing to unpack .../326-r-cran-png_0.1-8-1build2_amd64.deb ... 492s Unpacking r-cran-png (0.1-8-1build2) ... 492s Selecting previously unselected package r-cran-reticulate. 492s Preparing to unpack .../327-r-cran-reticulate_1.39.0+dfsg-1_amd64.deb ... 492s Unpacking r-cran-reticulate (1.39.0+dfsg-1) ... 492s Selecting previously unselected package r-cran-leiden. 492s Preparing to unpack .../328-r-cran-leiden_0.4.3.1+dfsg-1_all.deb ... 492s Unpacking r-cran-leiden (0.4.3.1+dfsg-1) ... 492s Selecting previously unselected package r-cran-zoo. 492s Preparing to unpack .../329-r-cran-zoo_1.8-12-2_amd64.deb ... 492s Unpacking r-cran-zoo (1.8-12-2) ... 492s Selecting previously unselected package r-cran-lmtest. 492s Preparing to unpack .../330-r-cran-lmtest_0.9.40-1_amd64.deb ... 492s Unpacking r-cran-lmtest (0.9.40-1) ... 492s Selecting previously unselected package r-cran-mathjaxr. 492s Preparing to unpack .../331-r-cran-mathjaxr_1.6-0-1_all.deb ... 492s Unpacking r-cran-mathjaxr (1.6-0-1) ... 492s Selecting previously unselected package r-cran-matrixmodels. 492s Preparing to unpack .../332-r-cran-matrixmodels_0.5-3-1_all.deb ... 492s Unpacking r-cran-matrixmodels (0.5-3-1) ... 492s Selecting previously unselected package r-cran-rbibutils. 492s Preparing to unpack .../333-r-cran-rbibutils_2.3-1_amd64.deb ... 492s Unpacking r-cran-rbibutils (2.3-1) ... 492s Selecting previously unselected package r-cran-rdpack. 492s Preparing to unpack .../334-r-cran-rdpack_2.6.2-1_all.deb ... 492s Unpacking r-cran-rdpack (2.6.2-1) ... 492s Selecting previously unselected package r-cran-mnormt. 492s Preparing to unpack .../335-r-cran-mnormt_2.1.1-2_amd64.deb ... 492s Unpacking r-cran-mnormt (2.1.1-2) ... 492s Selecting previously unselected package r-cran-sparsem. 492s Preparing to unpack .../336-r-cran-sparsem_1.84-2-1_amd64.deb ... 492s Unpacking r-cran-sparsem (1.84-2-1) ... 492s Selecting previously unselected package r-cran-quantreg. 492s Preparing to unpack .../337-r-cran-quantreg_5.99.1-1_amd64.deb ... 492s Unpacking r-cran-quantreg (5.99.1-1) ... 492s Selecting previously unselected package r-cran-sn. 492s Preparing to unpack .../338-r-cran-sn_2.1.1-2_all.deb ... 492s Unpacking r-cran-sn (2.1.1-2) ... 492s Selecting previously unselected package r-cran-mvtnorm. 492s Preparing to unpack .../339-r-cran-mvtnorm_1.3-3-1_amd64.deb ... 492s Unpacking r-cran-mvtnorm (1.3-3-1) ... 492s Selecting previously unselected package r-cran-tfisher. 492s Preparing to unpack .../340-r-cran-tfisher_0.2.0-3_all.deb ... 492s Unpacking r-cran-tfisher (0.2.0-3) ... 492s Selecting previously unselected package r-cran-plotrix. 492s Preparing to unpack .../341-r-cran-plotrix_3.8-4-1_all.deb ... 492s Unpacking r-cran-plotrix (3.8-4-1) ... 492s Selecting previously unselected package r-cran-th.data. 492s Preparing to unpack .../342-r-cran-th.data_1.1-2-2_all.deb ... 492s Unpacking r-cran-th.data (1.1-2-2) ... 492s Selecting previously unselected package r-cran-sandwich. 492s Preparing to unpack .../343-r-cran-sandwich_3.1-1-1_all.deb ... 492s Unpacking r-cran-sandwich (3.1-1-1) ... 492s Selecting previously unselected package r-cran-multcomp. 493s Preparing to unpack .../344-r-cran-multcomp_1.4-26-2_all.deb ... 493s Unpacking r-cran-multcomp (1.4-26-2) ... 493s Selecting previously unselected package r-cran-mutoss. 493s Preparing to unpack .../345-r-cran-mutoss_0.1-13-1_all.deb ... 493s Unpacking r-cran-mutoss (0.1-13-1) ... 493s Selecting previously unselected package r-cran-robustbase. 493s Preparing to unpack .../346-r-cran-robustbase_0.99-4-1-1_amd64.deb ... 493s Unpacking r-cran-robustbase (0.99-4-1-1) ... 493s Selecting previously unselected package r-cran-qqconf. 493s Preparing to unpack .../347-r-cran-qqconf_1.3.2+dfsg-1_amd64.deb ... 493s Unpacking r-cran-qqconf (1.3.2+dfsg-1) ... 493s Selecting previously unselected package r-cran-metap. 493s Preparing to unpack .../348-r-cran-metap_1.11-1_all.deb ... 493s Unpacking r-cran-metap (1.11-1) ... 493s Selecting previously unselected package r-cran-plotly. 493s Preparing to unpack .../349-r-cran-plotly_4.10.4+dfsg-2_all.deb ... 493s Unpacking r-cran-plotly (4.10.4+dfsg-2) ... 493s Selecting previously unselected package r-cran-segmented. 493s Preparing to unpack .../350-r-cran-segmented_2.1-3-1_all.deb ... 493s Unpacking r-cran-segmented (2.1-3-1) ... 493s Selecting previously unselected package r-cran-mixtools. 493s Preparing to unpack .../351-r-cran-mixtools_2.0.0-1_amd64.deb ... 493s Unpacking r-cran-mixtools (2.0.0-1) ... 493s Selecting previously unselected package r-cran-patchwork. 493s Preparing to unpack .../352-r-cran-patchwork_1.3.0-1_all.deb ... 493s Unpacking r-cran-patchwork (1.3.0-1) ... 493s Selecting previously unselected package r-cran-pbapply. 493s Preparing to unpack .../353-r-cran-pbapply_1.7-2-1_all.deb ... 493s Unpacking r-cran-pbapply (1.7-2-1) ... 493s Selecting previously unselected package r-cran-pkgbuild. 493s Preparing to unpack .../354-r-cran-pkgbuild_1.4.4-1_all.deb ... 493s Unpacking r-cran-pkgbuild (1.4.4-1) ... 493s Selecting previously unselected package r-cran-pkgload. 493s Preparing to unpack .../355-r-cran-pkgload_1.4.0-1_all.deb ... 493s Unpacking r-cran-pkgload (1.4.0-1) ... 493s Selecting previously unselected package r-cran-polyclip. 493s Preparing to unpack .../356-r-cran-polyclip_1.10-7-1_amd64.deb ... 493s Unpacking r-cran-polyclip (1.10-7-1) ... 493s Selecting previously unselected package r-cran-praise. 493s Preparing to unpack .../357-r-cran-praise_1.0.0-4build1_all.deb ... 493s Unpacking r-cran-praise (1.0.0-4build1) ... 493s Selecting previously unselected package r-cran-r.methodss3. 493s Preparing to unpack .../358-r-cran-r.methodss3_1.8.2-1_all.deb ... 493s Unpacking r-cran-r.methodss3 (1.8.2-1) ... 493s Selecting previously unselected package r-cran-r.oo. 493s Preparing to unpack .../359-r-cran-r.oo_1.26.0-1_all.deb ... 493s Unpacking r-cran-r.oo (1.26.0-1) ... 493s Selecting previously unselected package r-cran-r.utils. 493s Preparing to unpack .../360-r-cran-r.utils_2.12.3-1_all.deb ... 493s Unpacking r-cran-r.utils (2.12.3-1) ... 493s Selecting previously unselected package r-cran-rann. 493s Preparing to unpack .../361-r-cran-rann_2.6.2-1_amd64.deb ... 493s Unpacking r-cran-rann (2.6.2-1) ... 493s Selecting previously unselected package r-cran-rcppannoy. 493s Preparing to unpack .../362-r-cran-rcppannoy_0.0.22-1_amd64.deb ... 493s Unpacking r-cran-rcppannoy (0.0.22-1) ... 493s Selecting previously unselected package r-cran-rcppeigen. 493s Preparing to unpack .../363-r-cran-rcppeigen_0.3.4.0.2-1_amd64.deb ... 493s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 494s Selecting previously unselected package r-cran-rcpphnsw. 494s Preparing to unpack .../364-r-cran-rcpphnsw_0.5.0+ds-1_amd64.deb ... 494s Unpacking r-cran-rcpphnsw (0.5.0+ds-1) ... 494s Selecting previously unselected package r-cran-rcppprogress. 494s Preparing to unpack .../365-r-cran-rcppprogress_0.4.2-2build1_all.deb ... 494s Unpacking r-cran-rcppprogress (0.4.2-2build1) ... 494s Selecting previously unselected package r-cran-rocr. 494s Preparing to unpack .../366-r-cran-rocr_1.0-11-3_all.deb ... 494s Unpacking r-cran-rocr (1.0-11-3) ... 494s Selecting previously unselected package r-cran-rspectra. 494s Preparing to unpack .../367-r-cran-rspectra_0.16-2-1_amd64.deb ... 494s Unpacking r-cran-rspectra (0.16-2-1) ... 494s Selecting previously unselected package r-cran-rsvd. 494s Preparing to unpack .../368-r-cran-rsvd_1.0.5-1_all.deb ... 494s Unpacking r-cran-rsvd (1.0.5-1) ... 494s Selecting previously unselected package r-cran-rtsne. 494s Preparing to unpack .../369-r-cran-rtsne_0.17-1_amd64.deb ... 494s Unpacking r-cran-rtsne (0.17-1) ... 494s Selecting previously unselected package r-cran-scattermore. 494s Preparing to unpack .../370-r-cran-scattermore_1.2-1_amd64.deb ... 494s Unpacking r-cran-scattermore (1.2-1) ... 494s Selecting previously unselected package r-cran-sctransform. 494s Preparing to unpack .../371-r-cran-sctransform_0.4.1-1_amd64.deb ... 494s Unpacking r-cran-sctransform (0.4.1-1) ... 494s Selecting previously unselected package r-cran-sp. 494s Preparing to unpack .../372-r-cran-sp_1%3a2.1-4+dfsg-1_amd64.deb ... 494s Unpacking r-cran-sp (1:2.1-4+dfsg-1) ... 494s Selecting previously unselected package r-cran-spam. 494s Preparing to unpack .../373-r-cran-spam_2.11-0-1_amd64.deb ... 494s Unpacking r-cran-spam (2.11-0-1) ... 494s Selecting previously unselected package r-cran-seuratobject. 494s Preparing to unpack .../374-r-cran-seuratobject_5.0.2-1_amd64.deb ... 494s Unpacking r-cran-seuratobject (5.0.2-1) ... 494s Selecting previously unselected package r-cran-spatstat.utils. 494s Preparing to unpack .../375-r-cran-spatstat.utils_3.1-0-1_amd64.deb ... 494s Unpacking r-cran-spatstat.utils (3.1-0-1) ... 494s Selecting previously unselected package r-cran-spatstat.data. 494s Preparing to unpack .../376-r-cran-spatstat.data_3.1-2-1_all.deb ... 494s Unpacking r-cran-spatstat.data (3.1-2-1) ... 494s Selecting previously unselected package r-cran-spatstat.geom. 494s Preparing to unpack .../377-r-cran-spatstat.geom_3.2-9-2_amd64.deb ... 494s Unpacking r-cran-spatstat.geom (3.2-9-2) ... 494s Selecting previously unselected package r-cran-spatstat.random. 494s Preparing to unpack .../378-r-cran-spatstat.random_3.2-3-1_amd64.deb ... 494s Unpacking r-cran-spatstat.random (3.2-3-1) ... 494s Selecting previously unselected package r-cran-tensor. 494s Preparing to unpack .../379-r-cran-tensor_1.5-4_all.deb ... 494s Unpacking r-cran-tensor (1.5-4) ... 494s Selecting previously unselected package r-cran-spatstat.sparse. 494s Preparing to unpack .../380-r-cran-spatstat.sparse_3.0-3-1_amd64.deb ... 494s Unpacking r-cran-spatstat.sparse (3.0-3-1) ... 494s Selecting previously unselected package r-cran-spatstat.explore. 494s Preparing to unpack .../381-r-cran-spatstat.explore_3.2-7-1_amd64.deb ... 494s Unpacking r-cran-spatstat.explore (3.2-7-1) ... 494s Selecting previously unselected package r-cran-uwot. 494s Preparing to unpack .../382-r-cran-uwot_0.2.2-1_amd64.deb ... 494s Unpacking r-cran-uwot (0.2.2-1) ... 494s Selecting previously 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file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 498s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 498s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 498s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 498s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... 498s Setting up r-cran-reshape2 (1.4.4-2build1) ... 498s Setting up r-cran-rsvd (1.0.5-1) ... 498s Setting up r-cran-future.apply (1.11.2+dfsg-1) ... 498s Setting up r-cran-timechange (0.3.0-1) ... 498s Setting up r-cran-th.data (1.1-2-2) ... 498s Setting up r-cran-httr (1.4.7+dfsg-1) ... 498s Setting up r-cran-gridextra (2.3-3build1) ... 498s Setting up r-cran-scales (1.3.0-1) ... 498s Setting up r-cran-memoise (2.0.1-1) ... 498s Setting up r-cran-lava (1.7.3+dfsg-1) ... 498s Setting up r-cran-promises (1.3.0+dfsg-1) ... 498s Setting up r-cran-purrr (1.0.2-1) ... 498s Setting up r-cran-e1071 (1.7-16-1) ... 498s Setting up r-cran-spatstat.data (3.1-2-1) ... 498s Setting up r-cran-fastdummies (1.7.4-1) ... 498s Setting up r-cran-multcomp (1.4-26-2) ... 498s Setting up r-cran-qqconf (1.3.2+dfsg-1) ... 498s Setting up r-cran-seuratobject (5.0.2-1) ... 498s Setting up r-cran-spatstat.geom (3.2-9-2) ... 498s Setting up r-bioc-xvector (0.46.0-2) ... 498s Setting up r-cran-pkgbuild (1.4.4-1) ... 498s Setting up r-cran-hardhat (1.4.0+dfsg-1) ... 498s Setting up r-cran-dplyr (1.1.4-4) ... 498s Setting up r-cran-rspectra (0.16-2-1) ... 498s Setting up r-cran-gplots (3.2.0-1) ... 498s Setting up r-cran-uwot (0.2.2-1) ... 498s Setting up r-cran-leiden (0.4.3.1+dfsg-1) ... 498s Setting up r-bioc-multtest (2.62.0-2) ... 498s Setting up r-cran-lubridate (1.9.3+dfsg-1) ... 498s Setting up r-cran-pkgload (1.4.0-1) ... 498s Setting up r-cran-r.utils (2.12.3-1) ... 498s Setting up r-cran-rocr (1.0-11-3) ... 498s Setting up r-base-dev (4.4.2-1build1) ... 498s Setting up r-cran-prodlim (2024.06.25-1) ... 498s Setting up r-cran-fitdistrplus (1.2-1-1) ... 498s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 498s Setting up r-bioc-sparsearray (1.6.0+dfsg-2) ... 498s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 498s Setting up r-cran-scattermore (1.2-1) ... 498s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 498s Setting up r-cran-rpart (4.1.24-1) ... 498s Setting up r-cran-spatstat.random (3.2-3-1) ... 498s Setting up r-cran-ipred (0.9-15-1) ... 498s Setting up r-cran-testthat (3.2.1.1-1) ... 498s Setting up r-bioc-genomeinfodb (1.42.1+dfsg-2) ... 498s Setting up r-cran-bslib (0.7.0+dfsg-1) ... 498s Setting up r-cran-spatstat.explore (3.2-7-1) ... 498s Setting up r-cran-ggrepel (0.9.5-2) ... 498s Setting up r-cran-tidyr (1.3.1-1) ... 498s Setting up r-cran-recipes (1.1.0+dfsg-1) ... 498s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 498s Setting up r-cran-mutoss (0.1-13-1) ... 498s Setting up r-cran-ggridges (0.5.6-1) ... 498s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 498s Setting up r-cran-cowplot (1.1.3+dfsg-1) ... 498s Setting up r-cran-sctransform (0.4.1-1) ... 498s Setting up r-cran-patchwork (1.3.0-1) ... 498s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 498s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 498s Setting up r-cran-caret (6.0-94+dfsg-1) ... 498s Setting up r-cran-shiny (1.9.1+dfsg-1) ... 498s Setting up r-cran-shinyjs (2.1.0-1) ... 498s Setting up r-cran-miniui (0.1.1.1-3build1) ... 498s Setting up r-cran-rmarkdown (2.28+dfsg-1) ... 498s Setting up r-cran-conquer (1.3.3-1) ... 498s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... 498s Setting up r-cran-crosstalk (1.2.1+dfsg-1) ... 498s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 498s Setting up r-cran-quantreg (5.99.1-1) ... 498s Setting up r-cran-sn (2.1.1-2) ... 498s Setting up r-bioc-deseq2 (1.46.0+dfsg-2) ... 498s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 498s Setting up r-cran-colourpicker (1.3.0+dfsg-1) ... 498s Setting up r-cran-tfisher (0.2.0-3) ... 498s Setting up r-bioc-genomicalignments (1.42.0-2) ... 498s Setting up r-cran-metap (1.11-1) ... 498s Setting up r-bioc-rtracklayer (1.66.0-2) ... 498s Setting up r-cran-plotly (4.10.4+dfsg-2) ... 498s Setting up r-cran-mixtools (2.0.0-1) ... 498s Setting up r-cran-seurat (5.1.0-1) ... 498s Processing triggers for man-db (2.13.0-1) ... 499s Processing triggers for install-info (7.1.1-1) ... 500s Processing triggers for libc-bin (2.40-4ubuntu1) ... 502s autopkgtest [15:27:47]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 502s autopkgtest [15:27:47]: test pkg-r-autopkgtest: [----------------------- 502s Test: Try to load the R library Seurat 502s 502s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 502s Copyright (C) 2024 The R Foundation for Statistical Computing 502s Platform: x86_64-pc-linux-gnu 502s 502s R is free software and comes with ABSOLUTELY NO WARRANTY. 502s You are welcome to redistribute it under certain conditions. 502s Type 'license()' or 'licence()' for distribution details. 502s 502s R is a collaborative project with many contributors. 502s Type 'contributors()' for more information and 502s 'citation()' on how to cite R or R packages in publications. 502s 502s Type 'demo()' for some demos, 'help()' for on-line help, or 502s 'help.start()' for an HTML browser interface to help. 502s Type 'q()' to quit R. 502s 502s > library('Seurat') 502s Loading required package: SeuratObject 502s Loading required package: sp 504s ‘SeuratObject’ was built under R 4.4.1 but the current version is 504s 4.4.2; it is recomended that you reinstall ‘SeuratObject’ as the ABI 504s for R may have changed 504s ‘SeuratObject’ was built with package ‘Matrix’ 1.7.0 but the current 504s version is 1.7.1; it is recomended that you reinstall ‘SeuratObject’ as 504s the ABI for ‘Matrix’ may have changed 504s 504s Attaching package: ‘SeuratObject’ 504s 504s The following objects are masked from ‘package:base’: 504s 504s intersect, t 504s 505s > 505s > 505s Other tests are currently unsupported! 505s They will be progressively added. 506s autopkgtest [15:27:51]: test pkg-r-autopkgtest: -----------------------] 506s pkg-r-autopkgtest PASS 506s autopkgtest [15:27:51]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 507s autopkgtest [15:27:52]: @@@@@@@@@@@@@@@@@@@@ summary 507s run-unit-test PASS 507s pkg-r-autopkgtest PASS 511s nova [W] Skipping flock for amd64 511s Creating nova instance adt-plucky-amd64-r-cran-seurat-20250117-151924-juju-7f2275-prod-proposed-migration-environment-20-fc2ca2be-58be-4e13-9bce-5bd026845870 from image adt/ubuntu-plucky-amd64-server-20250117.img (UUID 8f35863a-398a-4b7d-9594-544c7b7656c3)... 511s nova [W] Timed out waiting for b5bfae6b-29bc-4f16-85ff-58586ba278d7 to get deleted. 511s nova [W] Skipping flock for amd64 511s Creating nova instance adt-plucky-amd64-r-cran-seurat-20250117-151924-juju-7f2275-prod-proposed-migration-environment-20-fc2ca2be-58be-4e13-9bce-5bd026845870 from image adt/ubuntu-plucky-amd64-server-20250117.img (UUID 8f35863a-398a-4b7d-9594-544c7b7656c3)... 511s nova [W] Timed out waiting for 13dee389-8e04-498e-8c96-40d4937beceb to get deleted.