0s autopkgtest [15:45:52]: starting date and time: 2024-11-03 15:45:52+0000 0s autopkgtest [15:45:52]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [15:45:52]: host juju-7f2275-prod-proposed-migration-environment-14; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.1un85241/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-seurat,src:r-cran-seuratobject --apt-upgrade r-cran-seurat --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-cran-seurat/5.1.0-1 r-cran-seuratobject/5.0.2-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-14@lcy02-9.secgroup --name adt-plucky-amd64-r-cran-seurat-20241103-143120-juju-7f2275-prod-proposed-migration-environment-14-83576774-72ec-4293-a670-ee8f5345e0d6 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-14 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 1388s autopkgtest [16:09:00]: testbed dpkg architecture: amd64 1388s autopkgtest [16:09:00]: testbed apt version: 2.9.8 1388s autopkgtest [16:09:00]: @@@@@@@@@@@@@@@@@@@@ test bed setup 1388s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 1388s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 1388s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [2268 kB] 1388s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [31.2 kB] 1388s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [177 kB] 1388s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [238 kB] 1388s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [165 kB] 1388s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [32.6 kB] 1388s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [833 kB] 1388s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [1715 kB] 1388s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [58.6 kB] 1388s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [18.1 kB] 1389s Fetched 5618 kB in 1s (9655 kB/s) 1389s Reading package lists... 1391s Reading package lists... 1391s Building dependency tree... 1391s Reading state information... 1391s Calculating upgrade... 1391s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1391s Reading package lists... 1392s Building dependency tree... 1392s Reading state information... 1392s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1392s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 1392s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 1392s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 1392s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 1394s Reading package lists... 1394s Reading package lists... 1394s Building dependency tree... 1394s Reading state information... 1395s Calculating upgrade... 1395s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1395s Reading package lists... 1395s Building dependency tree... 1395s Reading state information... 1396s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1396s autopkgtest [16:09:08]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 13:41:20 UTC 2024 1396s autopkgtest [16:09:08]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-seurat 1397s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-seurat 5.1.0-1 (dsc) [3385 B] 1397s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-seurat 5.1.0-1 (tar) [2064 kB] 1397s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-seurat 5.1.0-1 (diff) [4724 B] 1397s gpgv: Signature made Tue Sep 10 23:46:06 2024 UTC 1397s gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 1397s gpgv: issuer "plessy@debian.org" 1397s gpgv: Can't check signature: No public key 1397s dpkg-source: warning: cannot verify inline signature for ./r-cran-seurat_5.1.0-1.dsc: no acceptable signature found 1397s autopkgtest [16:09:09]: testing package r-cran-seurat version 5.1.0-1 1397s autopkgtest [16:09:09]: build not needed 1398s autopkgtest [16:09:10]: test run-unit-test: preparing testbed 1400s Reading package lists... 1400s Building dependency tree... 1400s Reading state information... 1400s Starting pkgProblemResolver with broken count: 0 1400s Starting 2 pkgProblemResolver with broken count: 0 1400s Done 1401s The following additional packages will be installed: 1401s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 1401s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax 1401s javascript-common libaec0 libamd3 libasan8 libblas3 libboost-dev 1401s libboost1.83-dev libcairo2 libcolamd3 libdatrie1 libdeflate0 1401s libfftw3-double3 libfontconfig1 libgcc-14-dev libgfortran5 libglpk40 1401s libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-103-1t64 libhdf5-hl-100t64 1401s libhwasan0 libice6 libitm1 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap 1401s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 1401s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 1401s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 1401s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack3 1401s liblerc4 liblsan0 libltdl7 liblua5.4-0 libpango-1.0-0 libpangocairo-1.0-0 1401s libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libquadmath0 1401s libsharpyuv0 libsm6 libstdc++-14-dev libsuitesparseconfig7 libsz2 libtcl8.6 1401s libthai-data libthai0 libtiff6 libtk8.6 libtsan2 libubsan1 libwebp7 1401s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 littler 1401s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 1401s r-base-core r-bioc-biobase r-bioc-biocgenerics r-bioc-biocio 1401s r-bioc-biocparallel r-bioc-biocviews r-bioc-biostrings r-bioc-delayedarray 1401s r-bioc-deseq2 r-bioc-genomeinfodb r-bioc-genomeinfodbdata 1401s r-bioc-genomicalignments r-bioc-genomicranges r-bioc-graph 1401s r-bioc-hsmmsinglecell r-bioc-iranges r-bioc-limma r-bioc-matrixgenerics 1401s r-bioc-monocle r-bioc-multtest r-bioc-rbgl r-bioc-rhtslib r-bioc-rsamtools 1401s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors 1401s r-bioc-singlecellexperiment r-bioc-sparsearray r-bioc-summarizedexperiment 1401s r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-ape 1401s r-cran-askpass r-cran-base64enc r-cran-beeswarm r-cran-bh r-cran-biocmanager 1401s r-cran-bit r-cran-bit64 r-cran-bitops r-cran-brio r-cran-bslib r-cran-cachem 1401s r-cran-cairo r-cran-callr r-cran-caret r-cran-catools r-cran-class 1401s r-cran-cli r-cran-clock r-cran-cluster r-cran-codetools r-cran-colorspace 1401s r-cran-colourpicker r-cran-combinat r-cran-commonmark r-cran-conquer 1401s r-cran-cowplot r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl 1401s r-cran-data.table r-cran-ddrtree r-cran-deldir r-cran-deoptimr r-cran-desc 1401s r-cran-diagram r-cran-diffobj r-cran-digest r-cran-dotcall64 r-cran-dplyr 1401s r-cran-dqrng r-cran-e1071 r-cran-ellipsis r-cran-evaluate r-cran-fansi 1401s r-cran-farver r-cran-fastdummies r-cran-fastica r-cran-fastmap 1401s r-cran-fitdistrplus r-cran-fnn r-cran-fontawesome r-cran-foreach 1401s r-cran-formatr r-cran-fs r-cran-futile.logger r-cran-futile.options 1401s r-cran-future r-cran-future.apply r-cran-gdata r-cran-generics 1401s r-cran-ggbeeswarm r-cran-ggplot2 r-cran-ggrastr r-cran-ggrepel 1401s r-cran-ggridges r-cran-globals r-cran-glue r-cran-goftest r-cran-gower 1401s r-cran-gplots r-cran-gridextra r-cran-gtable r-cran-gtools r-cran-hardhat 1401s r-cran-hdf5r r-cran-here r-cran-highr r-cran-htmltools r-cran-htmlwidgets 1401s r-cran-httpuv r-cran-httr r-cran-ica r-cran-igraph r-cran-ipred r-cran-irlba 1401s r-cran-isoband r-cran-iterators r-cran-jquerylib r-cran-jsonlite 1401s r-cran-kernlab r-cran-kernsmooth r-cran-knitr r-cran-labeling 1401s r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lava r-cran-lazyeval 1401s r-cran-leiden r-cran-leidenbase r-cran-lifecycle r-cran-listenv 1401s r-cran-littler r-cran-lmtest r-cran-locfit r-cran-lubridate r-cran-magrittr 1401s r-cran-mass r-cran-mathjaxr r-cran-matrix r-cran-matrixmodels 1401s r-cran-matrixstats r-cran-memoise r-cran-metap r-cran-mgcv r-cran-mime 1401s r-cran-miniui r-cran-mixtools r-cran-mnormt r-cran-modelmetrics 1401s r-cran-multcomp r-cran-munsell r-cran-mutoss r-cran-mvtnorm r-cran-nlme 1401s r-cran-nnet r-cran-numderiv r-cran-openssl r-cran-parallelly 1401s r-cran-patchwork r-cran-pbapply r-cran-pheatmap r-cran-pillar 1401s r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload 1401s r-cran-plotly r-cran-plotrix r-cran-plyr r-cran-png r-cran-polyclip 1401s r-cran-praise r-cran-proc r-cran-processx r-cran-prodlim r-cran-progressr 1401s r-cran-promises r-cran-proxy r-cran-ps r-cran-purrr r-cran-qqconf 1401s r-cran-quantreg r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils r-cran-r6 1401s r-cran-ragg r-cran-rann r-cran-rappdirs r-cran-rbibutils r-cran-rcolorbrewer 1401s r-cran-rcpp r-cran-rcppannoy r-cran-rcpparmadillo r-cran-rcppeigen 1401s r-cran-rcpphnsw r-cran-rcppprogress r-cran-rcpptoml r-cran-rcurl 1401s r-cran-rdpack r-cran-recipes r-cran-rematch2 r-cran-reshape2 r-cran-restfulr 1401s r-cran-reticulate r-cran-rjson r-cran-rlang r-cran-rmarkdown 1401s r-cran-robustbase r-cran-rocr r-cran-rpart r-cran-rprojroot r-cran-rspectra 1401s r-cran-rsvd r-cran-rtsne r-cran-runit r-cran-sandwich r-cran-sass 1401s r-cran-scales r-cran-scattermore r-cran-sctransform r-cran-segmented 1401s r-cran-seurat r-cran-seuratobject r-cran-shape r-cran-shiny r-cran-shinyjs 1401s r-cran-sitmo r-cran-slam r-cran-sn r-cran-snow r-cran-sourcetools r-cran-sp 1401s r-cran-spam r-cran-sparsem r-cran-spatstat.data r-cran-spatstat.explore 1401s r-cran-spatstat.geom r-cran-spatstat.random r-cran-spatstat.sparse 1401s r-cran-spatstat.utils r-cran-squarem r-cran-statmod r-cran-stringi 1401s r-cran-stringr r-cran-survival r-cran-sys r-cran-systemfonts r-cran-tensor 1401s r-cran-testthat r-cran-textshaping r-cran-tfisher r-cran-th.data 1401s r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-timechange 1401s r-cran-timedate r-cran-tinytex r-cran-tzdb r-cran-utf8 r-cran-uwot 1401s r-cran-vctrs r-cran-vgam r-cran-vipor r-cran-viridis r-cran-viridislite 1401s r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml r-cran-xtable r-cran-yaml 1401s r-cran-zoo unzip x11-common xdg-utils zip zlib1g-dev 1401s Suggested packages: 1401s apache2 | lighttpd | httpd libboost-doc libboost1.83-doc 1401s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 1401s libboost-context1.83-dev libboost-contract1.83-dev 1401s libboost-coroutine1.83-dev libboost-date-time1.83-dev 1401s libboost-exception1.83-dev libboost-fiber1.83-dev 1401s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 1401s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 1401s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 1401s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 1401s libboost-numpy1.83-dev libboost-program-options1.83-dev 1401s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 1401s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 1401s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 1401s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 1401s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 1401s libfftw3-bin libfftw3-dev libiodbc2-dev default-libmysqlclient-dev 1401s libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix libjs-mathjax-doc 1401s libstdc++-14-doc tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex 1401s texlive-luatex pandoc-citeproc texlive-latex-extra context wkhtmltopdf 1401s librsvg2-bin groff ghc php python ruby libjs-katex 1401s citation-style-language-styles elpa-ess r-doc-info | r-doc-pdf r-mathlib 1401s r-base-html r-bioc-all r-bioc-biocstyle r-bioc-annotationdbi r-bioc-affy 1401s r-bioc-annotate r-cran-bbmisc r-cran-doparallel r-bioc-variantannotation 1401s r-bioc-shortread r-cran-batchtools r-bioc-bsgenome r-bioc-genomicfeatures 1401s r-bioc-pwalign r-bioc-hdf5array r-bioc-genefilter r-cran-lobstr 1401s r-bioc-delayedmatrixstats r-bioc-tximport r-bioc-tximeta r-bioc-tximportdata 1401s r-cran-readr r-bioc-glmgampoi r-bioc-edger r-bioc-gviz r-bioc-annotationhub 1401s r-bioc-dexseq r-bioc-keggrest r-cran-biasedurn r-cran-ellipse r-bioc-go.db 1401s r-bioc-org.hs.eg.db r-bioc-sparsematrixstats r-cran-hmisc r-bioc-scater 1401s r-bioc-scrnaseq r-bioc-rhdf5 r-cran-dbi r-cran-rmariadb r-cran-gee 1401s r-cran-expm clustalw muscle phyml t-coffee r-cran-roxygen2 r-cran-ff 1401s r-cran-bradleyterry2 r-cran-covr r-cran-gam r-cran-mlbench r-cran-party 1401s r-cran-pls r-cran-randomforest r-cran-slider r-cran-vcd r-cran-jpeg 1401s r-cran-rstudioapi r-cran-bookdown r-cran-maps r-cran-sf r-cran-tinytest 1401s r-cran-uuid r-cran-magick r-cran-getopt r-cran-interp r-cran-fdrtool 1401s r-bioc-qvalue r-cran-formattable r-cran-nanotime r-cran-palmerpenguins 1401s r-cran-units r-cran-vdiffr r-cran-inline r-cran-devtools r-cran-rmpi 1401s r-cran-rlecuyer r-cran-spatstat.model r-cran-spatstat.linnet r-cran-spelling 1401s r-cran-bench r-cran-blob r-cran-hms r-cran-plm 1401s Recommended packages: 1401s node-jquery r-recommended r-base-dev r-doc-html r-cran-phangorn 1401s r-bioc-biocversion r-cran-remotes r-cran-covr r-cran-thematic r-cran-mockery 1401s r-cran-spelling r-cran-earth r-cran-mda r-cran-mlmetrics r-cran-themis 1401s r-cran-rstudioapi r-cran-whoami r-cran-xml2 r-cran-forcats 1401s r-cran-gridgraphics r-cran-magick r-cran-maps r-cran-vdiffr 1401s r-cran-venndiagram r-cran-bench r-cran-decor r-cran-lobstr r-cran-progress 1401s r-cran-webutils r-cran-xts r-cran-markdown r-cran-gh r-cran-rhpcblasctl 1401s r-cran-roxygen2 r-cran-broom r-cran-dbi r-cran-dbplyr r-cran-rmysql 1401s r-cran-rpostgresql r-cran-rsqlite libpcg-cpp-dev r-cran-unitizer 1401s r-cran-rgenoud r-cran-actuar r-cran-rsvg r-cran-testit r-cran-r.rsp 1401s r-cran-hexbin r-cran-hmisc r-cran-mapproj r-cran-profvis r-cran-sf 1401s r-cran-svglite r-cran-devtools r-cran-readr r-cran-modeldata r-cran-usethis 1401s r-cran-jpeg r-cran-rgl r-cran-mlbench r-cran-gridsvg r-cran-tikzdevice 1401s r-cran-webshot node-highlight.js r-cran-ellipse r-cran-fields r-cran-geepack 1401s r-cran-bookdown r-cran-lavasearch2 r-cran-lme4 r-cran-mets r-cran-optimx 1401s r-cran-polycor r-cran-network r-cran-qpdf r-cran-lintr r-cran-tidyverse 1401s r-cran-r.devices r-cran-sodium r-cran-ggthemes r-cran-ggally 1401s r-cran-ggalluvial r-cran-dendextend r-cran-irdisplay r-cran-palmerpenguins 1401s r-cran-rversions r-cran-doparallel r-cran-itertools r-cran-logcondens 1401s r-cran-webfakes r-cran-pbmcapply r-cran-furrr r-cran-cba r-cran-pingr 1401s r-cran-distr r-cran-tinytest r-cran-gbrd r-cran-ddalpha r-cran-dials 1401s r-cran-rcpproll r-cran-rsample r-cran-splines2 r-cran-rcppml r-cran-dimred 1401s r-cran-dygraphs r-cran-rsconnect r-cran-downlit r-cran-mockr 1401s r-cran-dichromat r-cran-hms r-cran-dt r-cran-gstat r-cran-terra 1401s r-cran-raster r-cran-truncdist r-cran-sm r-cran-gsl r-cran-spatial 1401s r-cran-spatstat.linnet r-cran-spatstat.model r-cran-spatstat r-cran-setrng 1401s r-cran-formattable r-cran-pkgdown r-cran-zeallot r-cran-vioplot r-cran-renv 1401s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 1401s x11-xserver-utils 1401s The following NEW packages will be installed: 1401s autopkgtest-satdep fontconfig fontconfig-config fonts-dejavu-core 1401s fonts-dejavu-mono fonts-font-awesome fonts-glyphicons-halflings 1401s fonts-mathjax javascript-common libaec0 libamd3 libasan8 libblas3 1401s libboost-dev libboost1.83-dev libcairo2 libcolamd3 libdatrie1 libdeflate0 1401s libfftw3-double3 libfontconfig1 libgcc-14-dev libgfortran5 libglpk40 1401s libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-103-1t64 libhdf5-hl-100t64 1401s libhwasan0 libice6 libitm1 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap 1401s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 1401s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 1401s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 1401s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack3 1401s liblerc4 liblsan0 libltdl7 liblua5.4-0 libpango-1.0-0 libpangocairo-1.0-0 1401s libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libquadmath0 1401s libsharpyuv0 libsm6 libstdc++-14-dev libsuitesparseconfig7 libsz2 libtcl8.6 1401s libthai-data libthai0 libtiff6 libtk8.6 libtsan2 libubsan1 libwebp7 1401s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 littler 1401s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 1401s r-base-core r-bioc-biobase r-bioc-biocgenerics r-bioc-biocio 1401s r-bioc-biocparallel r-bioc-biocviews r-bioc-biostrings r-bioc-delayedarray 1401s r-bioc-deseq2 r-bioc-genomeinfodb r-bioc-genomeinfodbdata 1401s r-bioc-genomicalignments r-bioc-genomicranges r-bioc-graph 1401s r-bioc-hsmmsinglecell r-bioc-iranges r-bioc-limma r-bioc-matrixgenerics 1401s r-bioc-monocle r-bioc-multtest r-bioc-rbgl r-bioc-rhtslib r-bioc-rsamtools 1401s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors 1401s r-bioc-singlecellexperiment r-bioc-sparsearray r-bioc-summarizedexperiment 1401s r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-ape 1401s r-cran-askpass r-cran-base64enc r-cran-beeswarm r-cran-bh r-cran-biocmanager 1401s r-cran-bit r-cran-bit64 r-cran-bitops r-cran-brio r-cran-bslib r-cran-cachem 1401s r-cran-cairo r-cran-callr r-cran-caret r-cran-catools r-cran-class 1401s r-cran-cli r-cran-clock r-cran-cluster r-cran-codetools r-cran-colorspace 1401s r-cran-colourpicker r-cran-combinat r-cran-commonmark r-cran-conquer 1401s r-cran-cowplot r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl 1401s r-cran-data.table r-cran-ddrtree r-cran-deldir r-cran-deoptimr r-cran-desc 1401s r-cran-diagram r-cran-diffobj r-cran-digest r-cran-dotcall64 r-cran-dplyr 1401s r-cran-dqrng r-cran-e1071 r-cran-ellipsis r-cran-evaluate r-cran-fansi 1401s r-cran-farver r-cran-fastdummies r-cran-fastica r-cran-fastmap 1401s r-cran-fitdistrplus r-cran-fnn r-cran-fontawesome r-cran-foreach 1401s r-cran-formatr r-cran-fs r-cran-futile.logger r-cran-futile.options 1401s r-cran-future r-cran-future.apply r-cran-gdata r-cran-generics 1401s r-cran-ggbeeswarm r-cran-ggplot2 r-cran-ggrastr r-cran-ggrepel 1401s r-cran-ggridges r-cran-globals r-cran-glue r-cran-goftest r-cran-gower 1401s r-cran-gplots r-cran-gridextra r-cran-gtable r-cran-gtools r-cran-hardhat 1401s r-cran-hdf5r r-cran-here r-cran-highr r-cran-htmltools r-cran-htmlwidgets 1401s r-cran-httpuv r-cran-httr r-cran-ica r-cran-igraph r-cran-ipred r-cran-irlba 1401s r-cran-isoband r-cran-iterators r-cran-jquerylib r-cran-jsonlite 1401s r-cran-kernlab r-cran-kernsmooth r-cran-knitr r-cran-labeling 1401s r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lava r-cran-lazyeval 1401s r-cran-leiden r-cran-leidenbase r-cran-lifecycle r-cran-listenv 1401s r-cran-littler r-cran-lmtest r-cran-locfit r-cran-lubridate r-cran-magrittr 1401s r-cran-mass r-cran-mathjaxr r-cran-matrix r-cran-matrixmodels 1401s r-cran-matrixstats r-cran-memoise r-cran-metap r-cran-mgcv r-cran-mime 1401s r-cran-miniui r-cran-mixtools r-cran-mnormt r-cran-modelmetrics 1401s r-cran-multcomp r-cran-munsell r-cran-mutoss r-cran-mvtnorm r-cran-nlme 1401s r-cran-nnet r-cran-numderiv r-cran-openssl r-cran-parallelly 1401s r-cran-patchwork r-cran-pbapply r-cran-pheatmap r-cran-pillar 1401s r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload 1401s r-cran-plotly r-cran-plotrix r-cran-plyr r-cran-png r-cran-polyclip 1401s r-cran-praise r-cran-proc r-cran-processx r-cran-prodlim r-cran-progressr 1401s r-cran-promises r-cran-proxy r-cran-ps r-cran-purrr r-cran-qqconf 1401s r-cran-quantreg r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils r-cran-r6 1401s r-cran-ragg r-cran-rann r-cran-rappdirs r-cran-rbibutils r-cran-rcolorbrewer 1401s r-cran-rcpp r-cran-rcppannoy r-cran-rcpparmadillo r-cran-rcppeigen 1401s r-cran-rcpphnsw r-cran-rcppprogress r-cran-rcpptoml r-cran-rcurl 1401s r-cran-rdpack r-cran-recipes r-cran-rematch2 r-cran-reshape2 r-cran-restfulr 1401s r-cran-reticulate r-cran-rjson r-cran-rlang r-cran-rmarkdown 1401s r-cran-robustbase r-cran-rocr r-cran-rpart r-cran-rprojroot r-cran-rspectra 1401s r-cran-rsvd r-cran-rtsne r-cran-runit r-cran-sandwich r-cran-sass 1401s r-cran-scales r-cran-scattermore r-cran-sctransform r-cran-segmented 1401s r-cran-seurat r-cran-seuratobject r-cran-shape r-cran-shiny r-cran-shinyjs 1401s r-cran-sitmo r-cran-slam r-cran-sn r-cran-snow r-cran-sourcetools r-cran-sp 1401s r-cran-spam r-cran-sparsem r-cran-spatstat.data r-cran-spatstat.explore 1401s r-cran-spatstat.geom r-cran-spatstat.random r-cran-spatstat.sparse 1401s r-cran-spatstat.utils r-cran-squarem r-cran-statmod r-cran-stringi 1401s r-cran-stringr r-cran-survival r-cran-sys r-cran-systemfonts r-cran-tensor 1401s r-cran-testthat r-cran-textshaping r-cran-tfisher r-cran-th.data 1401s r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-timechange 1401s r-cran-timedate r-cran-tinytex r-cran-tzdb r-cran-utf8 r-cran-uwot 1401s r-cran-vctrs r-cran-vgam r-cran-vipor r-cran-viridis r-cran-viridislite 1401s r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml r-cran-xtable r-cran-yaml 1401s r-cran-zoo unzip x11-common xdg-utils zip zlib1g-dev 1401s 0 upgraded, 374 newly installed, 0 to remove and 0 not upgraded. 1401s Need to get 406 MB/406 MB of archives. 1401s After this operation, 1082 MB of additional disk space will be used. 1401s Get:1 /tmp/autopkgtest.4heZiw/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [872 B] 1401s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 1401s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 1401s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB] 1401s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB] 1401s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB] 1401s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 1401s Get:8 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 1401s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 1401s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 11+nmu1 [5936 B] 1401s Get:11 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 1401s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-7ubuntu1 [148 kB] 1401s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libsuitesparseconfig7 amd64 1:7.8.0+dfsg-1 [13.1 kB] 1401s Get:14 http://ftpmaster.internal/ubuntu plucky/universe amd64 libamd3 amd64 1:7.8.0+dfsg-1 [27.2 kB] 1401s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 14.2.0-7ubuntu1 [2998 kB] 1401s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-3build2 [247 kB] 1401s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 14.2.0-7ubuntu1 [29.1 kB] 1401s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 14.2.0-7ubuntu1 [1316 kB] 1401s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 14.2.0-7ubuntu1 [2733 kB] 1401s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 14.2.0-7ubuntu1 [1177 kB] 1401s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 14.2.0-7ubuntu1 [1634 kB] 1401s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 14.2.0-7ubuntu1 [153 kB] 1401s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-7ubuntu1 [2814 kB] 1401s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-7ubuntu1 [2503 kB] 1401s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost1.83-dev amd64 1.83.0-3.2ubuntu2 [10.7 MB] 1401s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost-dev amd64 1.83.0.2ubuntu1 [4468 B] 1401s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.42.2-1build1 [279 kB] 1401s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 1401s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 1401s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 1401s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 1401s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libcolamd3 amd64 1:7.8.0+dfsg-1 [19.1 kB] 1401s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 1401s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.21-1 [49.8 kB] 1401s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libfftw3-double3 amd64 3.3.10-1ubuntu4 [839 kB] 1402s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-7ubuntu1 [909 kB] 1402s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl7 amd64 2.4.7-7build1 [40.3 kB] 1402s Get:38 http://ftpmaster.internal/ubuntu plucky/universe amd64 libglpk40 amd64 5.0-1build2 [369 kB] 1402s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 1402s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 9.0.0-1 [487 kB] 1402s Get:41 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 1402s Get:42 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-103-1t64 amd64 1.10.10+repack-4ubuntu3 [1280 kB] 1402s Get:43 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-4ubuntu3 [56.6 kB] 1402s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 1402s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.0.10-1build3 [41.4 kB] 1402s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-2ubuntu2 [150 kB] 1402s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 1402s Get:48 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 1402s Get:49 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 1402s Get:50 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 1402s Get:51 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 1402s Get:52 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 1402s Get:53 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 1402s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 1402s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 1402s Get:56 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 1402s Get:57 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 1402s Get:58 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 1402s Get:59 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 1402s Get:60 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 1402s Get:61 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 1402s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-3build2 [2668 kB] 1402s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-4ubuntu2 [179 kB] 1402s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 liblua5.4-0 amd64 5.4.6-3build2 [166 kB] 1402s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 1402s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 1402s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.54.0+ds-2 [235 kB] 1402s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.54.0+ds-2 [49.1 kB] 1402s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.54.0+ds-2 [28.8 kB] 1402s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper1 amd64 1.1.29build1 [13.4 kB] 1402s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 1.1.29build1 [8650 B] 1402s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [17.5 kB] 1402s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.3-1build3 [15.7 kB] 1402s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.14+dfsg-1build1 [988 kB] 1402s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 1402s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.4.0-0.1 [231 kB] 1402s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 1402s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 1402s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 1402s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.14-1build1 [779 kB] 1402s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 1402s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14 [174 kB] 1402s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 1402s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 1402s Get:85 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.1-1 [28.5 MB] 1402s Get:86 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-1 [96.0 kB] 1402s Get:87 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-1 [2486 B] 1402s Get:88 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 1402s Get:89 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 1402s Get:90 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 1402s Get:91 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc-data all 3.1.11.1-3 [78.7 kB] 1402s Get:92 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc amd64 3.1.11.1+ds-2 [27.2 MB] 1402s Get:93 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocgenerics all 0.50.0-2 [605 kB] 1402s Get:94 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biobase amd64 2.64.0-4 [2154 kB] 1402s Get:95 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-s4vectors amd64 0.42.1+dfsg-2 [1890 kB] 1402s Get:96 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocio all 1.14.0+dfsg-1 [215 kB] 1402s Get:97 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-formatr all 1.14-2 [152 kB] 1402s Get:98 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 1402s Get:99 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 1402s Get:100 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 1402s Get:101 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 1402s Get:102 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-codetools all 0.2-20-1 [90.5 kB] 1402s Get:103 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bh all 1.84.0-1 [5962 B] 1402s Get:104 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cpp11 all 0.4.7-1 [266 kB] 1402s Get:105 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocparallel amd64 1.38.0-2 [1342 kB] 1402s Get:106 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-graph amd64 1.82.0-1 [1297 kB] 1402s Get:107 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rbgl amd64 1.80.0+dfsg-1 [569 kB] 1402s Get:108 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xml amd64 3.99-0.17-1 [1745 kB] 1402s Get:109 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bitops amd64 1.0-7-1 [29.8 kB] 1402s Get:110 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcurl amd64 1.98-1.14+dfsg-1build2 [793 kB] 1402s Get:111 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-runit all 0.4.33-1 [377 kB] 1402s Get:112 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 1402s Get:113 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocviews all 1.72.0-1 [668 kB] 1402s Get:114 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-iranges amd64 2.38.1-1 [2298 kB] 1402s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 1402s Get:116 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-zlibbioc all 1.50.0+dfsg-2 [10.1 kB] 1402s Get:117 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-xvector amd64 0.44.0-1 [624 kB] 1402s Get:118 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-curl amd64 5.2.1+dfsg-1 [180 kB] 1402s Get:119 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.8.8+dfsg-1 [441 kB] 1402s Get:120 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 1402s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sys amd64 3.4.2-1 [44.6 kB] 1402s Get:122 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-askpass amd64 1.2.0-1 [24.6 kB] 1402s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-openssl amd64 2.2.0+dfsg-1 [405 kB] 1402s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB] 1402s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 1402s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-ucsc.utils all 1.0.0+ds-2 [77.0 kB] 1402s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodbdata all 1.2.12-1 [12.6 MB] 1402s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodb all 1.40.1+dfsg-1 [3883 kB] 1402s Get:129 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.2-1 [164 kB] 1402s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biostrings amd64 2.72.1+dfsg-1 [13.2 MB] 1402s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 1402s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrix amd64 1.7-0-3 [4185 kB] 1403s Get:133 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixstats amd64 1.3.0-1 [505 kB] 1403s Get:134 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-matrixgenerics all 1.16.0-2 [424 kB] 1403s Get:135 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-abind all 1.4-5-2 [63.6 kB] 1403s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-s4arrays amd64 1.4.1+dfsg-1 [525 kB] 1403s Get:137 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-sparsearray amd64 1.4.8+dfsg-1 [1254 kB] 1403s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-delayedarray amd64 0.30.1+dfsg-1 [1846 kB] 1403s Get:139 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomicranges amd64 1.56.1+dfsg-1 [1840 kB] 1403s Get:140 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-summarizedexperiment all 1.34.0+dfsg-1 [1134 kB] 1403s Get:141 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-locfit amd64 1.5-9.9-1 [518 kB] 1403s Get:142 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.2-1 [1380 kB] 1403s Get:143 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.7.0-1 [154 kB] 1403s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.4-1 [1708 kB] 1403s Get:145 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 1403s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtable all 0.3.5+dfsg-1 [192 kB] 1403s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 1403s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mass amd64 7.3-61-1 [1109 kB] 1403s Get:149 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nlme amd64 3.1.166-1 [2314 kB] 1403s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB] 1403s Get:151 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB] 1403s Get:152 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 1403s Get:153 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colorspace amd64 2.1-0+dfsg-1 [1541 kB] 1403s Get:154 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-munsell all 0.5.1-1 [213 kB] 1403s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 1403s Get:156 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridislite all 0.4.2-2 [1088 kB] 1403s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scales all 1.3.0-1 [603 kB] 1403s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 1403s Get:159 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 1403s Get:160 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 1403s Get:161 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 1403s Get:162 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 1403s Get:163 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 1403s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-2 [415 kB] 1403s Get:165 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.0+dfsg-1 [228 kB] 1403s Get:166 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 1403s Get:167 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 1403s Get:168 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.13-1 [1990 kB] 1403s Get:169 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpparmadillo amd64 14.0.0-1-1 [866 kB] 1403s Get:170 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-deseq2 amd64 1.44.0+dfsg-1 [1236 kB] 1403s Get:171 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rhtslib amd64 3.0.0+dfsg-1 [1413 kB] 1403s Get:172 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rsamtools amd64 2.20.0+dfsg-1 [3684 kB] 1403s Get:173 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomicalignments amd64 1.40.0-1 [2149 kB] 1403s Get:174 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-hsmmsinglecell all 1.24.0-1 [16.7 MB] 1403s Get:175 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-statmod amd64 1.5.0-1 [295 kB] 1403s Get:176 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-limma amd64 3.60.4+dfsg-1 [1955 kB] 1403s Get:177 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vgam amd64 1.1-9-1 [7312 kB] 1403s Get:178 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-irlba amd64 2.3.5.1-4 [295 kB] 1403s Get:179 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.0-1build1 [1425 kB] 1403s Get:180 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ddrtree amd64 0.1.5-2 [154 kB] 1403s Get:181 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-igraph amd64 2.0.3-1 [5098 kB] 1403s Get:182 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB] 1403s Get:183 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cluster amd64 2.1.6-1build1 [553 kB] 1403s Get:184 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-combinat all 0.0-8-7build1 [43.1 kB] 1403s Get:185 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastica amd64 1.2-4-1 [42.3 kB] 1403s Get:186 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rtsne amd64 0.17-1 [109 kB] 1403s Get:187 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringi amd64 1.8.3-1 [873 kB] 1403s Get:188 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 1403s Get:189 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reshape2 amd64 1.4.4-2build1 [114 kB] 1403s Get:190 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-leidenbase amd64 0.1.27-1 [2366 kB] 1403s Get:191 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB] 1403s Get:192 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB] 1403s Get:193 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dplyr amd64 1.1.4-1 [1515 kB] 1403s Get:194 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pheatmap all 1.0.12-2build1 [78.2 kB] 1403s Get:195 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB] 1403s Get:196 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-slam amd64 0.1-52-1 [186 kB] 1403s Get:197 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gridextra all 2.3-3build1 [1024 kB] 1403s Get:198 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridis all 0.6.5-1 [2770 kB] 1403s Get:199 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rann amd64 2.6.1-1build2 [41.9 kB] 1403s Get:200 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-monocle amd64 2.32.0-1 [1441 kB] 1403s Get:201 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-survival amd64 3.7-0-1 [6271 kB] 1403s Get:202 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-multtest amd64 2.60.0-1 [843 kB] 1403s Get:203 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rjson amd64 0.2.21-1 [143 kB] 1403s Get:204 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.8-2 [108 kB] 1403s Get:205 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-restfulr amd64 0.0.15-1 [380 kB] 1403s Get:206 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rtracklayer amd64 1.64.0-1 [5074 kB] 1403s Get:207 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-singlecellexperiment all 1.26.0+ds-1 [832 kB] 1403s Get:208 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.36-1 [199 kB] 1403s Get:209 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ape amd64 5.8-1 [2923 kB] 1403s Get:210 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 1403s Get:211 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-beeswarm amd64 0.4.0-1 [82.3 kB] 1403s Get:212 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bit amd64 4.0.5-1 [1063 kB] 1403s Get:213 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bit64 amd64 4.0.5-1 [465 kB] 1403s Get:214 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 1403s Get:215 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.1.1-1 [70.5 kB] 1403s Get:216 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.0.8-1 [72.1 kB] 1403s Get:217 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 1403s Get:218 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 1403s Get:219 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 1403s Get:220 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.4+dfsg-1 [245 kB] 1403s Get:221 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 1403s Get:222 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 1403s Get:223 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.7.0+dfsg-1 [4255 kB] 1403s Get:224 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cairo amd64 1.6-2-1 [88.8 kB] 1403s Get:225 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ps amd64 1.7.6-1 [313 kB] 1403s Get:226 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-processx amd64 3.8.4-1 [353 kB] 1403s Get:227 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 1403s Get:228 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-class amd64 7.3-22-2build1 [88.2 kB] 1403s Get:229 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-e1071 amd64 1.7-14-1 [558 kB] 1404s Get:230 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-iterators all 1.0.14-1 [336 kB] 1404s Get:231 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-foreach all 1.5.2-1 [124 kB] 1404s Get:232 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-data.table amd64 1.15.4+dfsg-2.2 [1860 kB] 1404s Get:233 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-modelmetrics amd64 1.2.2.2-1build1 [128 kB] 1404s Get:234 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proc amd64 1.18.5-1 [966 kB] 1404s Get:235 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tzdb amd64 0.4.0-2 [521 kB] 1404s Get:236 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-clock amd64 0.7.0-1.1 [1765 kB] 1404s Get:237 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ellipsis amd64 0.3.2-2 [35.6 kB] 1404s Get:238 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gower amd64 1.0.1-1 [207 kB] 1404s Get:239 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-hardhat all 1.4.0+dfsg-1 [565 kB] 1404s Get:240 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rpart amd64 4.1.23-1build1 [661 kB] 1404s Get:241 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nnet amd64 7.3-19-2build1 [112 kB] 1404s Get:242 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shape all 1.4.6-1 [770 kB] 1404s Get:243 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diagram all 1.6.5-2 [656 kB] 1404s Get:244 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernsmooth amd64 2.23-24-1 [92.9 kB] 1404s Get:245 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-globals all 0.16.3-1 [120 kB] 1404s Get:246 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-listenv all 0.9.1+dfsg-1 [112 kB] 1404s Get:247 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-parallelly amd64 1.37.1-1build1 [365 kB] 1404s Get:248 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-future all 1.33.1+dfsg-1 [634 kB] 1404s Get:249 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-future.apply all 1.11.2+dfsg-1 [172 kB] 1404s Get:250 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-numderiv all 2016.8-1.1-3 [115 kB] 1404s Get:251 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-progressr all 0.14.0-1 [338 kB] 1404s Get:252 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-squarem all 2021.1-1 [179 kB] 1404s Get:253 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lava all 1.7.3+dfsg-1 [2166 kB] 1404s Get:254 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-prodlim amd64 2024.06.25-1 [415 kB] 1404s Get:255 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ipred amd64 0.9-14-1 [383 kB] 1404s Get:256 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-timechange amd64 0.3.0-1 [178 kB] 1404s Get:257 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lubridate amd64 1.9.3+dfsg-1 [1010 kB] 1404s Get:258 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-purrr amd64 1.0.2-1 [502 kB] 1404s Get:259 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 1404s Get:260 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-timedate amd64 4032.109-1 [1229 kB] 1404s Get:261 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-recipes all 1.0.10+dfsg-2 [2004 kB] 1404s Get:262 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-caret amd64 6.0-94+dfsg-1 [3434 kB] 1404s Get:263 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-catools amd64 1.18.2-1 [201 kB] 1404s Get:264 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 0.24.0-1 [93.5 kB] 1404s Get:265 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xfun amd64 0.45+dfsg-1 [518 kB] 1404s Get:266 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 1404s Get:267 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 1404s Get:268 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-knitr all 1.47+dfsg-1 [911 kB] 1404s Get:269 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 1404s Get:270 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tinytex all 0.51-1 [145 kB] 1404s Get:271 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-modernizr all 3.13.0-0.1 [101 kB] 1404s Get:272 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.3.2+dfsg-1 [123 kB] 1404s Get:273 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.0+dfsg-1 [287 kB] 1404s Get:274 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 1404s Get:275 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 1404s Get:276 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 1404s Get:277 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.1-1 [131 kB] 1404s Get:278 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 1404s Get:279 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.8.1.1+dfsg-1 [2873 kB] 1404s Get:280 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rmarkdown all 2.27+dfsg-1 [1501 kB] 1404s Get:281 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 1404s Get:282 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-miniui all 0.1.1.1-3build1 [36.1 kB] 1404s Get:283 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shinyjs all 2.1.0-1 [967 kB] 1404s Get:284 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colourpicker all 1.3.0+dfsg-1 [1191 kB] 1404s Get:285 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-conquer amd64 1.3.3-1 [499 kB] 1404s Get:286 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cowplot all 1.1.3+dfsg-1 [614 kB] 1404s Get:287 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lazyeval amd64 0.2.2-1build1 [144 kB] 1404s Get:288 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 1404s Get:289 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-deldir amd64 2.0-4-1build1 [270 kB] 1404s Get:290 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-deoptimr all 1.1-3-1 [74.4 kB] 1404s Get:291 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 1404s Get:292 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 1404s Get:293 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dotcall64 amd64 1.1-1-1 [38.1 kB] 1404s Get:294 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sitmo amd64 2.0.2-1 [130 kB] 1404s Get:295 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dqrng amd64 0.3.2+dfsg-1 [161 kB] 1404s Get:296 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastdummies all 1.7.3-2 [49.9 kB] 1404s Get:297 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fitdistrplus all 1.1-11-1 [1902 kB] 1404s Get:298 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fnn amd64 1.1.4-1 [122 kB] 1404s Get:299 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtools amd64 3.9.5-1 [340 kB] 1404s Get:300 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gdata all 3.0.1-1 [491 kB] 1404s Get:301 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vipor all 0.4.7-1 [4624 kB] 1404s Get:302 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggbeeswarm all 0.7.2-1 [1732 kB] 1404s Get:303 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-png amd64 0.1-8-1build2 [40.6 kB] 1404s Get:304 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-systemfonts amd64 1.1.0-1 [245 kB] 1404s Get:305 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-textshaping amd64 0.3.7-2 [95.5 kB] 1404s Get:306 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ragg amd64 1.3.2-1 [495 kB] 1404s Get:307 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggrastr all 1.0.2-1 [2566 kB] 1404s Get:308 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggrepel amd64 0.9.5-2 [254 kB] 1404s Get:309 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggridges all 0.5.6-1 [2195 kB] 1404s Get:310 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-goftest amd64 1.2-3-1 [59.5 kB] 1404s Get:311 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gplots all 3.2.0-1 [484 kB] 1404s Get:312 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-hdf5r amd64 1.3.9+dfsg-1build2 [2067 kB] 1404s Get:313 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rprojroot all 2.0.4-1 [124 kB] 1404s Get:314 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-here all 1.0.1-2 [50.3 kB] 1404s Get:315 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ica all 1.0-3-1 [85.4 kB] 1404s Get:316 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernlab amd64 0.9-33-1 [1947 kB] 1404s Get:317 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpptoml amd64 0.2.2+dfsg-1 [110 kB] 1404s Get:318 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reticulate amd64 1.35.0+dfsg-1 [1195 kB] 1404s Get:319 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-leiden all 0.4.3.1+dfsg-1 [71.9 kB] 1404s Get:320 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-zoo amd64 1.8-12-2 [984 kB] 1404s Get:321 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lmtest amd64 0.9.40-1 [396 kB] 1404s Get:322 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mathjaxr all 1.6-0-1 [605 kB] 1404s Get:323 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixmodels all 0.5-3-1 [361 kB] 1404s Get:324 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rbibutils amd64 2.2.16-1 [754 kB] 1404s Get:325 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rdpack all 2.6-1 [742 kB] 1404s Get:326 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mnormt amd64 2.1.1-2 [170 kB] 1404s Get:327 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sparsem amd64 1.84-2-1 [813 kB] 1404s Get:328 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-quantreg amd64 5.98-1 [1540 kB] 1404s Get:329 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sn all 2.1.1-2 [1815 kB] 1404s Get:330 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mvtnorm amd64 1.2-5-1 [749 kB] 1404s Get:331 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tfisher all 0.2.0-3 [79.8 kB] 1404s Get:332 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plotrix all 3.8-4-1 [1120 kB] 1404s Get:333 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-th.data all 1.1-2-2 [8794 kB] 1404s Get:334 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sandwich all 3.1-0-1 [1484 kB] 1404s Get:335 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-multcomp all 1.4-26-2 [699 kB] 1404s Get:336 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mutoss all 0.1-13-1 [1123 kB] 1404s Get:337 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-robustbase amd64 0.99-3-1 [3033 kB] 1404s Get:338 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-qqconf amd64 1.3.2+dfsg-1 [157 kB] 1404s Get:339 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-metap all 1.9-1 [564 kB] 1404s Get:340 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plotly all 4.10.4+dfsg-2 [3666 kB] 1404s Get:341 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-segmented all 2.1-0-1 [1360 kB] 1404s Get:342 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mixtools amd64 2.0.0-1 [1399 kB] 1404s Get:343 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-patchwork all 1.2.0-1 [3161 kB] 1404s Get:344 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pbapply all 1.7-2-1 [102 kB] 1404s Get:345 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgbuild all 1.4.4-1 [212 kB] 1404s Get:346 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgload all 1.4.0-1 [247 kB] 1404s Get:347 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-polyclip amd64 1.10-6-1 [113 kB] 1404s Get:348 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 1404s Get:349 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 1404s Get:350 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.oo all 1.26.0-1 [955 kB] 1404s Get:351 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.utils all 2.12.3-1 [1386 kB] 1404s Get:352 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppannoy amd64 0.0.22-1 [235 kB] 1404s Get:353 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpphnsw amd64 0.5.0+ds-1 [171 kB] 1404s Get:354 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppprogress all 0.4.2-2build1 [22.0 kB] 1404s Get:355 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 1404s Get:356 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rocr all 1.0-11-3 [456 kB] 1404s Get:357 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rspectra amd64 0.16-1-1 [413 kB] 1404s Get:358 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rsvd all 1.0.5-1 [3589 kB] 1404s Get:359 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scattermore amd64 1.2-1 [331 kB] 1404s Get:360 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sctransform amd64 0.4.1-1 [504 kB] 1404s Get:361 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sp amd64 1:2.1-2+dfsg-1 [1447 kB] 1404s Get:362 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spam amd64 2.10-0-1 [2765 kB] 1405s Get:363 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-seuratobject amd64 5.0.2-1 [1744 kB] 1405s Get:364 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.utils amd64 3.0-4-1 [361 kB] 1405s Get:365 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.data all 3.0-4-1 [4090 kB] 1405s Get:366 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.geom amd64 3.2-9-2 [3946 kB] 1405s Get:367 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.random amd64 3.2-3-1 [1169 kB] 1405s Get:368 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tensor all 1.5-4 [15.7 kB] 1405s Get:369 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.sparse amd64 3.0-3-1 [215 kB] 1405s Get:370 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.explore amd64 3.2-7-1 [3432 kB] 1405s Get:371 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-uwot amd64 0.1.16-2 [642 kB] 1405s Get:372 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-seurat amd64 5.1.0-1 [3255 kB] 1405s Get:373 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-waldo all 0.5.2-1build1 [120 kB] 1405s Get:374 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-testthat amd64 3.2.1.1-1 [1636 kB] 1405s Preconfiguring packages ... 1406s Fetched 406 MB in 4s (115 MB/s) 1406s Selecting previously unselected package fonts-dejavu-mono. 1406s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75323 files and directories currently installed.) 1406s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8_all.deb ... 1406s Unpacking fonts-dejavu-mono (2.37-8) ... 1406s Selecting previously unselected package fonts-dejavu-core. 1406s Preparing to unpack .../001-fonts-dejavu-core_2.37-8_all.deb ... 1406s Unpacking fonts-dejavu-core (2.37-8) ... 1406s Selecting previously unselected package fontconfig-config. 1406s Preparing to unpack .../002-fontconfig-config_2.15.0-1.1ubuntu2_amd64.deb ... 1406s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 1406s Selecting previously unselected package libfontconfig1:amd64. 1406s Preparing to unpack .../003-libfontconfig1_2.15.0-1.1ubuntu2_amd64.deb ... 1406s Unpacking libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ... 1406s Selecting previously unselected package fontconfig. 1406s Preparing to unpack .../004-fontconfig_2.15.0-1.1ubuntu2_amd64.deb ... 1406s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 1406s Selecting previously unselected package fonts-font-awesome. 1406s Preparing to unpack .../005-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 1406s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 1406s Selecting previously unselected package fonts-glyphicons-halflings. 1406s Preparing to unpack .../006-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 1406s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 1406s Selecting previously unselected package fonts-mathjax. 1406s Preparing to unpack .../007-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 1406s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 1406s Selecting previously unselected package javascript-common. 1406s Preparing to unpack .../008-javascript-common_11+nmu1_all.deb ... 1406s Unpacking javascript-common (11+nmu1) ... 1406s Selecting previously unselected package libaec0:amd64. 1406s Preparing to unpack .../009-libaec0_1.1.3-1_amd64.deb ... 1406s Unpacking libaec0:amd64 (1.1.3-1) ... 1406s Selecting previously unselected package libgomp1:amd64. 1406s Preparing to unpack .../010-libgomp1_14.2.0-7ubuntu1_amd64.deb ... 1406s Unpacking libgomp1:amd64 (14.2.0-7ubuntu1) ... 1407s Selecting previously unselected package libsuitesparseconfig7:amd64. 1407s Preparing to unpack .../011-libsuitesparseconfig7_1%3a7.8.0+dfsg-1_amd64.deb ... 1407s Unpacking libsuitesparseconfig7:amd64 (1:7.8.0+dfsg-1) ... 1407s Selecting previously unselected package libamd3:amd64. 1407s Preparing to unpack .../012-libamd3_1%3a7.8.0+dfsg-1_amd64.deb ... 1407s Unpacking libamd3:amd64 (1:7.8.0+dfsg-1) ... 1407s Selecting previously unselected package libasan8:amd64. 1407s Preparing to unpack .../013-libasan8_14.2.0-7ubuntu1_amd64.deb ... 1407s Unpacking libasan8:amd64 (14.2.0-7ubuntu1) ... 1407s Selecting previously unselected package libblas3:amd64. 1407s Preparing to unpack .../014-libblas3_3.12.0-3build2_amd64.deb ... 1407s Unpacking libblas3:amd64 (3.12.0-3build2) ... 1407s Selecting previously unselected package libitm1:amd64. 1407s Preparing to unpack .../015-libitm1_14.2.0-7ubuntu1_amd64.deb ... 1407s Unpacking libitm1:amd64 (14.2.0-7ubuntu1) ... 1407s Selecting previously unselected package liblsan0:amd64. 1407s Preparing to unpack .../016-liblsan0_14.2.0-7ubuntu1_amd64.deb ... 1407s Unpacking liblsan0:amd64 (14.2.0-7ubuntu1) ... 1407s Selecting previously unselected package libtsan2:amd64. 1407s Preparing to unpack .../017-libtsan2_14.2.0-7ubuntu1_amd64.deb ... 1407s Unpacking libtsan2:amd64 (14.2.0-7ubuntu1) ... 1407s Selecting previously unselected package libubsan1:amd64. 1407s Preparing to unpack .../018-libubsan1_14.2.0-7ubuntu1_amd64.deb ... 1407s Unpacking libubsan1:amd64 (14.2.0-7ubuntu1) ... 1407s Selecting previously unselected package libhwasan0:amd64. 1407s Preparing to unpack .../019-libhwasan0_14.2.0-7ubuntu1_amd64.deb ... 1407s Unpacking libhwasan0:amd64 (14.2.0-7ubuntu1) ... 1407s Selecting previously unselected package libquadmath0:amd64. 1407s Preparing to unpack .../020-libquadmath0_14.2.0-7ubuntu1_amd64.deb ... 1407s Unpacking libquadmath0:amd64 (14.2.0-7ubuntu1) ... 1407s Selecting previously unselected package libgcc-14-dev:amd64. 1407s Preparing to unpack .../021-libgcc-14-dev_14.2.0-7ubuntu1_amd64.deb ... 1407s Unpacking libgcc-14-dev:amd64 (14.2.0-7ubuntu1) ... 1407s Selecting previously unselected package libstdc++-14-dev:amd64. 1407s Preparing to unpack .../022-libstdc++-14-dev_14.2.0-7ubuntu1_amd64.deb ... 1407s Unpacking libstdc++-14-dev:amd64 (14.2.0-7ubuntu1) ... 1407s Selecting previously unselected package libboost1.83-dev:amd64. 1407s Preparing to unpack .../023-libboost1.83-dev_1.83.0-3.2ubuntu2_amd64.deb ... 1407s Unpacking libboost1.83-dev:amd64 (1.83.0-3.2ubuntu2) ... 1410s Selecting previously unselected package libboost-dev:amd64. 1410s Preparing to unpack .../024-libboost-dev_1.83.0.2ubuntu1_amd64.deb ... 1410s Unpacking libboost-dev:amd64 (1.83.0.2ubuntu1) ... 1410s Selecting previously unselected package libpixman-1-0:amd64. 1410s Preparing to unpack .../025-libpixman-1-0_0.42.2-1build1_amd64.deb ... 1410s Unpacking libpixman-1-0:amd64 (0.42.2-1build1) ... 1410s Selecting previously unselected package libxcb-render0:amd64. 1410s Preparing to unpack .../026-libxcb-render0_1.17.0-2_amd64.deb ... 1410s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 1410s Selecting previously unselected package libxcb-shm0:amd64. 1410s Preparing to unpack .../027-libxcb-shm0_1.17.0-2_amd64.deb ... 1410s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 1410s Selecting previously unselected package libxrender1:amd64. 1410s Preparing to unpack .../028-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 1410s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 1410s Selecting previously unselected package libcairo2:amd64. 1410s Preparing to unpack .../029-libcairo2_1.18.2-2_amd64.deb ... 1410s Unpacking libcairo2:amd64 (1.18.2-2) ... 1410s Selecting previously unselected package libcolamd3:amd64. 1410s Preparing to unpack .../030-libcolamd3_1%3a7.8.0+dfsg-1_amd64.deb ... 1410s Unpacking libcolamd3:amd64 (1:7.8.0+dfsg-1) ... 1410s Selecting previously unselected package libdatrie1:amd64. 1410s Preparing to unpack .../031-libdatrie1_0.2.13-3build1_amd64.deb ... 1410s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 1410s Selecting previously unselected package libdeflate0:amd64. 1410s Preparing to unpack .../032-libdeflate0_1.21-1_amd64.deb ... 1410s Unpacking libdeflate0:amd64 (1.21-1) ... 1410s Selecting previously unselected package libfftw3-double3:amd64. 1410s Preparing to unpack .../033-libfftw3-double3_3.3.10-1ubuntu4_amd64.deb ... 1410s Unpacking libfftw3-double3:amd64 (3.3.10-1ubuntu4) ... 1410s Selecting previously unselected package libgfortran5:amd64. 1410s Preparing to unpack .../034-libgfortran5_14.2.0-7ubuntu1_amd64.deb ... 1410s Unpacking libgfortran5:amd64 (14.2.0-7ubuntu1) ... 1410s Selecting previously unselected package libltdl7:amd64. 1410s Preparing to unpack .../035-libltdl7_2.4.7-7build1_amd64.deb ... 1410s Unpacking libltdl7:amd64 (2.4.7-7build1) ... 1410s Selecting previously unselected package libglpk40:amd64. 1410s Preparing to unpack .../036-libglpk40_5.0-1build2_amd64.deb ... 1410s Unpacking libglpk40:amd64 (5.0-1build2) ... 1410s Selecting previously unselected package libgraphite2-3:amd64. 1410s Preparing to unpack .../037-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 1410s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 1410s Selecting previously unselected package libharfbuzz0b:amd64. 1410s Preparing to unpack .../038-libharfbuzz0b_9.0.0-1_amd64.deb ... 1410s Unpacking libharfbuzz0b:amd64 (9.0.0-1) ... 1410s Selecting previously unselected package libsz2:amd64. 1410s Preparing to unpack .../039-libsz2_1.1.3-1_amd64.deb ... 1410s Unpacking libsz2:amd64 (1.1.3-1) ... 1410s Selecting previously unselected package libhdf5-103-1t64:amd64. 1410s Preparing to unpack .../040-libhdf5-103-1t64_1.10.10+repack-4ubuntu3_amd64.deb ... 1410s Unpacking libhdf5-103-1t64:amd64 (1.10.10+repack-4ubuntu3) ... 1410s Selecting previously unselected package libhdf5-hl-100t64:amd64. 1410s Preparing to unpack .../041-libhdf5-hl-100t64_1.10.10+repack-4ubuntu3_amd64.deb ... 1410s Unpacking libhdf5-hl-100t64:amd64 (1.10.10+repack-4ubuntu3) ... 1410s Selecting previously unselected package x11-common. 1410s Preparing to unpack .../042-x11-common_1%3a7.7+23ubuntu3_all.deb ... 1410s Unpacking x11-common (1:7.7+23ubuntu3) ... 1410s Selecting previously unselected package libice6:amd64. 1410s Preparing to unpack .../043-libice6_2%3a1.0.10-1build3_amd64.deb ... 1410s Unpacking libice6:amd64 (2:1.0.10-1build3) ... 1410s Selecting previously unselected package libjpeg-turbo8:amd64. 1410s Preparing to unpack .../044-libjpeg-turbo8_2.1.5-2ubuntu2_amd64.deb ... 1410s Unpacking libjpeg-turbo8:amd64 (2.1.5-2ubuntu2) ... 1410s Selecting previously unselected package libjpeg8:amd64. 1410s Preparing to unpack .../045-libjpeg8_8c-2ubuntu11_amd64.deb ... 1410s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 1410s Selecting previously unselected package libjs-bootstrap. 1410s Preparing to unpack .../046-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 1410s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 1410s Selecting previously unselected package libjs-popper.js. 1410s Preparing to unpack .../047-libjs-popper.js_1.16.1+ds-6_all.deb ... 1410s Unpacking libjs-popper.js (1.16.1+ds-6) ... 1410s Selecting previously unselected package libjs-bootstrap4. 1411s Preparing to unpack .../048-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 1411s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 1411s Selecting previously unselected package libjs-d3. 1411s Preparing to unpack .../049-libjs-d3_3.5.17-4_all.deb ... 1411s Unpacking libjs-d3 (3.5.17-4) ... 1411s Selecting previously unselected package libjs-es5-shim. 1411s Preparing to unpack .../050-libjs-es5-shim_4.6.7-2_all.deb ... 1411s Unpacking libjs-es5-shim (4.6.7-2) ... 1411s Selecting previously unselected package libjs-highlight.js. 1411s Preparing to unpack .../051-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 1411s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 1411s Selecting previously unselected package libjs-jquery. 1411s Preparing to unpack .../052-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 1411s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 1411s Selecting previously unselected package libjs-jquery-datatables. 1411s Preparing to unpack .../053-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 1411s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 1411s Selecting previously unselected package libjs-sifter.js. 1411s Preparing to unpack .../054-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 1411s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 1411s Selecting previously unselected package libjs-microplugin.js. 1411s Preparing to unpack .../055-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 1411s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 1411s Selecting previously unselected package libjs-jquery-selectize.js. 1411s Preparing to unpack .../056-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 1411s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 1411s Selecting previously unselected package libjs-jquery-ui. 1411s Preparing to unpack .../057-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 1411s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 1411s Selecting previously unselected package libjs-json. 1411s Preparing to unpack .../058-libjs-json_0~20221030+~1.0.8-1_all.deb ... 1411s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 1411s Selecting previously unselected package libjs-prettify. 1411s Preparing to unpack .../059-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 1411s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 1411s Selecting previously unselected package liblapack3:amd64. 1411s Preparing to unpack .../060-liblapack3_3.12.0-3build2_amd64.deb ... 1411s Unpacking liblapack3:amd64 (3.12.0-3build2) ... 1411s Selecting previously unselected package liblerc4:amd64. 1411s Preparing to unpack .../061-liblerc4_4.0.0+ds-4ubuntu2_amd64.deb ... 1411s Unpacking liblerc4:amd64 (4.0.0+ds-4ubuntu2) ... 1411s Selecting previously unselected package liblua5.4-0:amd64. 1411s Preparing to unpack .../062-liblua5.4-0_5.4.6-3build2_amd64.deb ... 1411s Unpacking liblua5.4-0:amd64 (5.4.6-3build2) ... 1411s Selecting previously unselected package libthai-data. 1411s Preparing to unpack .../063-libthai-data_0.1.29-2build1_all.deb ... 1411s Unpacking libthai-data (0.1.29-2build1) ... 1411s Selecting previously unselected package libthai0:amd64. 1411s Preparing to unpack .../064-libthai0_0.1.29-2build1_amd64.deb ... 1411s Unpacking libthai0:amd64 (0.1.29-2build1) ... 1411s Selecting previously unselected package libpango-1.0-0:amd64. 1411s Preparing to unpack .../065-libpango-1.0-0_1.54.0+ds-2_amd64.deb ... 1411s Unpacking libpango-1.0-0:amd64 (1.54.0+ds-2) ... 1411s Selecting previously unselected package libpangoft2-1.0-0:amd64. 1411s Preparing to unpack .../066-libpangoft2-1.0-0_1.54.0+ds-2_amd64.deb ... 1411s Unpacking libpangoft2-1.0-0:amd64 (1.54.0+ds-2) ... 1411s Selecting previously unselected package libpangocairo-1.0-0:amd64. 1411s Preparing to unpack .../067-libpangocairo-1.0-0_1.54.0+ds-2_amd64.deb ... 1411s Unpacking libpangocairo-1.0-0:amd64 (1.54.0+ds-2) ... 1411s Selecting previously unselected package libpaper1:amd64. 1411s Preparing to unpack .../068-libpaper1_1.1.29build1_amd64.deb ... 1411s Unpacking libpaper1:amd64 (1.1.29build1) ... 1411s Selecting previously unselected package libpaper-utils. 1411s Preparing to unpack .../069-libpaper-utils_1.1.29build1_amd64.deb ... 1411s Unpacking libpaper-utils (1.1.29build1) ... 1411s Selecting previously unselected package libsharpyuv0:amd64. 1411s Preparing to unpack .../070-libsharpyuv0_1.4.0-0.1_amd64.deb ... 1411s Unpacking libsharpyuv0:amd64 (1.4.0-0.1) ... 1411s Selecting previously unselected package libsm6:amd64. 1411s Preparing to unpack .../071-libsm6_2%3a1.2.3-1build3_amd64.deb ... 1411s Unpacking libsm6:amd64 (2:1.2.3-1build3) ... 1411s Selecting previously unselected package libtcl8.6:amd64. 1411s Preparing to unpack .../072-libtcl8.6_8.6.14+dfsg-1build1_amd64.deb ... 1411s Unpacking libtcl8.6:amd64 (8.6.14+dfsg-1build1) ... 1412s Selecting previously unselected package libjbig0:amd64. 1412s Preparing to unpack .../073-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 1412s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 1412s Selecting previously unselected package libwebp7:amd64. 1412s Preparing to unpack .../074-libwebp7_1.4.0-0.1_amd64.deb ... 1412s Unpacking libwebp7:amd64 (1.4.0-0.1) ... 1412s Selecting previously unselected package libtiff6:amd64. 1412s Preparing to unpack .../075-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ... 1412s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 1412s Selecting previously unselected package libxft2:amd64. 1412s Preparing to unpack .../076-libxft2_2.3.6-1build1_amd64.deb ... 1412s Unpacking libxft2:amd64 (2.3.6-1build1) ... 1412s Selecting previously unselected package libxss1:amd64. 1412s Preparing to unpack .../077-libxss1_1%3a1.2.3-1build3_amd64.deb ... 1412s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 1412s Selecting previously unselected package libtk8.6:amd64. 1412s Preparing to unpack .../078-libtk8.6_8.6.14-1build1_amd64.deb ... 1412s Unpacking libtk8.6:amd64 (8.6.14-1build1) ... 1412s Selecting previously unselected package libxt6t64:amd64. 1412s Preparing to unpack .../079-libxt6t64_1%3a1.2.1-1.2build1_amd64.deb ... 1412s Unpacking libxt6t64:amd64 (1:1.2.1-1.2build1) ... 1412s Selecting previously unselected package zip. 1412s Preparing to unpack .../080-zip_3.0-14_amd64.deb ... 1412s Unpacking zip (3.0-14) ... 1412s Selecting previously unselected package unzip. 1412s Preparing to unpack .../081-unzip_6.0-28ubuntu6_amd64.deb ... 1412s Unpacking unzip (6.0-28ubuntu6) ... 1412s Selecting previously unselected package xdg-utils. 1412s Preparing to unpack .../082-xdg-utils_1.2.1-0ubuntu1_all.deb ... 1412s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 1412s Selecting previously unselected package r-base-core. 1412s Preparing to unpack .../083-r-base-core_4.4.1-1_amd64.deb ... 1412s Unpacking r-base-core (4.4.1-1) ... 1412s Selecting previously unselected package r-cran-littler. 1412s Preparing to unpack .../084-r-cran-littler_0.3.20-1_amd64.deb ... 1412s Unpacking r-cran-littler (0.3.20-1) ... 1412s Selecting previously unselected package littler. 1412s Preparing to unpack .../085-littler_0.3.20-1_all.deb ... 1412s Unpacking littler (0.3.20-1) ... 1412s Selecting previously unselected package node-bootstrap-sass. 1412s Preparing to unpack .../086-node-bootstrap-sass_3.4.3-2_all.deb ... 1412s Unpacking node-bootstrap-sass (3.4.3-2) ... 1412s Selecting previously unselected package node-html5shiv. 1413s Preparing to unpack .../087-node-html5shiv_3.7.3+dfsg-5_all.deb ... 1413s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 1413s Selecting previously unselected package node-normalize.css. 1413s Preparing to unpack .../088-node-normalize.css_8.0.1-5_all.deb ... 1413s Unpacking node-normalize.css (8.0.1-5) ... 1413s Selecting previously unselected package pandoc-data. 1413s Preparing to unpack .../089-pandoc-data_3.1.11.1-3_all.deb ... 1413s Unpacking pandoc-data (3.1.11.1-3) ... 1413s Selecting previously unselected package pandoc. 1413s Preparing to unpack .../090-pandoc_3.1.11.1+ds-2_amd64.deb ... 1413s Unpacking pandoc (3.1.11.1+ds-2) ... 1413s Selecting previously unselected package r-bioc-biocgenerics. 1413s Preparing to unpack .../091-r-bioc-biocgenerics_0.50.0-2_all.deb ... 1413s Unpacking r-bioc-biocgenerics (0.50.0-2) ... 1413s Selecting previously unselected package r-bioc-biobase. 1413s Preparing to unpack .../092-r-bioc-biobase_2.64.0-4_amd64.deb ... 1413s Unpacking r-bioc-biobase (2.64.0-4) ... 1414s Selecting previously unselected package r-bioc-s4vectors. 1414s Preparing to unpack .../093-r-bioc-s4vectors_0.42.1+dfsg-2_amd64.deb ... 1414s Unpacking r-bioc-s4vectors (0.42.1+dfsg-2) ... 1414s Selecting previously unselected package r-bioc-biocio. 1414s Preparing to unpack .../094-r-bioc-biocio_1.14.0+dfsg-1_all.deb ... 1414s Unpacking r-bioc-biocio (1.14.0+dfsg-1) ... 1414s Selecting previously unselected package r-cran-formatr. 1414s Preparing to unpack .../095-r-cran-formatr_1.14-2_all.deb ... 1414s Unpacking r-cran-formatr (1.14-2) ... 1414s Selecting previously unselected package r-cran-lambda.r. 1414s Preparing to unpack .../096-r-cran-lambda.r_1.2.4-2build1_all.deb ... 1414s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 1414s Selecting previously unselected package r-cran-futile.options. 1414s Preparing to unpack .../097-r-cran-futile.options_1.0.1-3build1_all.deb ... 1414s Unpacking r-cran-futile.options (1.0.1-3build1) ... 1414s Selecting previously unselected package r-cran-futile.logger. 1414s Preparing to unpack .../098-r-cran-futile.logger_1.4.3-4build1_all.deb ... 1414s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 1414s Selecting previously unselected package r-cran-snow. 1414s Preparing to unpack .../099-r-cran-snow_1%3a0.4.4-2_all.deb ... 1414s Unpacking r-cran-snow (1:0.4.4-2) ... 1414s Selecting previously unselected package r-cran-codetools. 1414s Preparing to unpack .../100-r-cran-codetools_0.2-20-1_all.deb ... 1414s Unpacking r-cran-codetools (0.2-20-1) ... 1414s Selecting previously unselected package r-cran-bh. 1414s Preparing to unpack .../101-r-cran-bh_1.84.0-1_all.deb ... 1414s Unpacking r-cran-bh (1.84.0-1) ... 1414s Selecting previously unselected package r-cran-cpp11. 1414s Preparing to unpack .../102-r-cran-cpp11_0.4.7-1_all.deb ... 1414s Unpacking r-cran-cpp11 (0.4.7-1) ... 1414s Selecting previously unselected package r-bioc-biocparallel. 1414s Preparing to unpack .../103-r-bioc-biocparallel_1.38.0-2_amd64.deb ... 1414s Unpacking r-bioc-biocparallel (1.38.0-2) ... 1414s Selecting previously unselected package r-bioc-graph. 1414s Preparing to unpack .../104-r-bioc-graph_1.82.0-1_amd64.deb ... 1414s Unpacking r-bioc-graph (1.82.0-1) ... 1414s Selecting previously unselected package r-bioc-rbgl. 1414s Preparing to unpack .../105-r-bioc-rbgl_1.80.0+dfsg-1_amd64.deb ... 1414s Unpacking r-bioc-rbgl (1.80.0+dfsg-1) ... 1414s Selecting previously unselected package r-cran-xml. 1414s Preparing to unpack .../106-r-cran-xml_3.99-0.17-1_amd64.deb ... 1414s Unpacking r-cran-xml (3.99-0.17-1) ... 1414s Selecting previously unselected package r-cran-bitops. 1414s Preparing to unpack .../107-r-cran-bitops_1.0-7-1_amd64.deb ... 1414s Unpacking r-cran-bitops (1.0-7-1) ... 1414s Selecting previously unselected package r-cran-rcurl. 1414s Preparing to unpack .../108-r-cran-rcurl_1.98-1.14+dfsg-1build2_amd64.deb ... 1414s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1build2) ... 1414s Selecting previously unselected package r-cran-runit. 1414s Preparing to unpack .../109-r-cran-runit_0.4.33-1_all.deb ... 1414s Unpacking r-cran-runit (0.4.33-1) ... 1414s Selecting previously unselected package r-cran-biocmanager. 1414s Preparing to unpack .../110-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 1414s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 1414s Selecting previously unselected package r-bioc-biocviews. 1414s Preparing to unpack .../111-r-bioc-biocviews_1.72.0-1_all.deb ... 1414s Unpacking r-bioc-biocviews (1.72.0-1) ... 1414s Selecting previously unselected package r-bioc-iranges. 1414s Preparing to unpack .../112-r-bioc-iranges_2.38.1-1_amd64.deb ... 1414s Unpacking r-bioc-iranges (2.38.1-1) ... 1414s Selecting previously unselected package zlib1g-dev:amd64. 1414s Preparing to unpack .../113-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ... 1414s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 1414s Selecting previously unselected package r-bioc-zlibbioc. 1414s Preparing to unpack .../114-r-bioc-zlibbioc_1.50.0+dfsg-2_all.deb ... 1414s Unpacking r-bioc-zlibbioc (1.50.0+dfsg-2) ... 1415s Selecting previously unselected package r-bioc-xvector. 1415s Preparing to unpack .../115-r-bioc-xvector_0.44.0-1_amd64.deb ... 1415s Unpacking r-bioc-xvector (0.44.0-1) ... 1415s Selecting previously unselected package r-cran-curl. 1415s Preparing to unpack .../116-r-cran-curl_5.2.1+dfsg-1_amd64.deb ... 1415s Unpacking r-cran-curl (5.2.1+dfsg-1) ... 1415s Selecting previously unselected package r-cran-jsonlite. 1415s Preparing to unpack .../117-r-cran-jsonlite_1.8.8+dfsg-1_amd64.deb ... 1415s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 1415s Selecting previously unselected package r-cran-mime. 1415s Preparing to unpack .../118-r-cran-mime_0.12-2_amd64.deb ... 1415s Unpacking r-cran-mime (0.12-2) ... 1415s Selecting previously unselected package r-cran-sys. 1415s Preparing to unpack .../119-r-cran-sys_3.4.2-1_amd64.deb ... 1415s Unpacking r-cran-sys (3.4.2-1) ... 1415s Selecting previously unselected package r-cran-askpass. 1415s Preparing to unpack .../120-r-cran-askpass_1.2.0-1_amd64.deb ... 1415s Unpacking r-cran-askpass (1.2.0-1) ... 1415s Selecting previously unselected package r-cran-openssl. 1415s Preparing to unpack .../121-r-cran-openssl_2.2.0+dfsg-1_amd64.deb ... 1415s Unpacking r-cran-openssl (2.2.0+dfsg-1) ... 1415s Selecting previously unselected package r-cran-r6. 1415s Preparing to unpack .../122-r-cran-r6_2.5.1-1_all.deb ... 1415s Unpacking r-cran-r6 (2.5.1-1) ... 1415s Selecting previously unselected package r-cran-httr. 1415s Preparing to unpack .../123-r-cran-httr_1.4.7+dfsg-1_all.deb ... 1415s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 1415s Selecting previously unselected package r-bioc-ucsc.utils. 1415s Preparing to unpack .../124-r-bioc-ucsc.utils_1.0.0+ds-2_all.deb ... 1415s Unpacking r-bioc-ucsc.utils (1.0.0+ds-2) ... 1415s Selecting previously unselected package r-bioc-genomeinfodbdata. 1415s Preparing to unpack .../125-r-bioc-genomeinfodbdata_1.2.12-1_all.deb ... 1415s Unpacking r-bioc-genomeinfodbdata (1.2.12-1) ... 1415s Selecting previously unselected package r-bioc-genomeinfodb. 1415s Preparing to unpack .../126-r-bioc-genomeinfodb_1.40.1+dfsg-1_all.deb ... 1415s Unpacking r-bioc-genomeinfodb (1.40.1+dfsg-1) ... 1415s Selecting previously unselected package r-cran-crayon. 1415s Preparing to unpack .../127-r-cran-crayon_1.5.2-1_all.deb ... 1415s Unpacking r-cran-crayon (1.5.2-1) ... 1415s Selecting previously unselected package r-bioc-biostrings. 1415s Preparing to unpack .../128-r-bioc-biostrings_2.72.1+dfsg-1_amd64.deb ... 1415s Unpacking r-bioc-biostrings (2.72.1+dfsg-1) ... 1415s Selecting previously unselected package r-cran-lattice. 1415s Preparing to unpack .../129-r-cran-lattice_0.22-6-1_amd64.deb ... 1415s Unpacking r-cran-lattice (0.22-6-1) ... 1415s Selecting previously unselected package r-cran-matrix. 1415s Preparing to unpack .../130-r-cran-matrix_1.7-0-3_amd64.deb ... 1415s Unpacking r-cran-matrix (1.7-0-3) ... 1415s Selecting previously unselected package r-cran-matrixstats. 1415s Preparing to unpack .../131-r-cran-matrixstats_1.3.0-1_amd64.deb ... 1415s Unpacking r-cran-matrixstats (1.3.0-1) ... 1415s Selecting previously unselected package r-bioc-matrixgenerics. 1415s Preparing to unpack .../132-r-bioc-matrixgenerics_1.16.0-2_all.deb ... 1415s Unpacking r-bioc-matrixgenerics (1.16.0-2) ... 1415s Selecting previously unselected package r-cran-abind. 1415s Preparing to unpack .../133-r-cran-abind_1.4-5-2_all.deb ... 1415s Unpacking r-cran-abind (1.4-5-2) ... 1415s Selecting previously unselected package r-bioc-s4arrays. 1415s Preparing to unpack .../134-r-bioc-s4arrays_1.4.1+dfsg-1_amd64.deb ... 1415s Unpacking r-bioc-s4arrays (1.4.1+dfsg-1) ... 1415s Selecting previously unselected package r-bioc-sparsearray. 1415s Preparing to unpack .../135-r-bioc-sparsearray_1.4.8+dfsg-1_amd64.deb ... 1415s Unpacking r-bioc-sparsearray (1.4.8+dfsg-1) ... 1416s Selecting previously unselected package r-bioc-delayedarray. 1416s Preparing to unpack .../136-r-bioc-delayedarray_0.30.1+dfsg-1_amd64.deb ... 1416s Unpacking r-bioc-delayedarray (0.30.1+dfsg-1) ... 1416s Selecting previously unselected package r-bioc-genomicranges. 1416s Preparing to unpack .../137-r-bioc-genomicranges_1.56.1+dfsg-1_amd64.deb ... 1416s Unpacking r-bioc-genomicranges (1.56.1+dfsg-1) ... 1416s Selecting previously unselected package r-bioc-summarizedexperiment. 1416s Preparing to unpack .../138-r-bioc-summarizedexperiment_1.34.0+dfsg-1_all.deb ... 1416s Unpacking r-bioc-summarizedexperiment (1.34.0+dfsg-1) ... 1416s Selecting previously unselected package r-cran-locfit. 1416s Preparing to unpack .../139-r-cran-locfit_1.5-9.9-1_amd64.deb ... 1416s Unpacking r-cran-locfit (1.5-9.9-1) ... 1416s Selecting previously unselected package r-cran-cli. 1416s Preparing to unpack .../140-r-cran-cli_3.6.2-1_amd64.deb ... 1416s Unpacking r-cran-cli (3.6.2-1) ... 1416s Selecting previously unselected package r-cran-glue. 1416s Preparing to unpack .../141-r-cran-glue_1.7.0-1_amd64.deb ... 1416s Unpacking r-cran-glue (1.7.0-1) ... 1416s Selecting previously unselected package r-cran-rlang. 1416s Preparing to unpack .../142-r-cran-rlang_1.1.4-1_amd64.deb ... 1416s Unpacking r-cran-rlang (1.1.4-1) ... 1416s Selecting previously unselected package r-cran-lifecycle. 1416s Preparing to unpack .../143-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 1416s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 1416s Selecting previously unselected package r-cran-gtable. 1416s Preparing to unpack .../144-r-cran-gtable_0.3.5+dfsg-1_all.deb ... 1416s Unpacking r-cran-gtable (0.3.5+dfsg-1) ... 1416s Selecting previously unselected package r-cran-isoband. 1416s Preparing to unpack .../145-r-cran-isoband_0.2.7-1_amd64.deb ... 1416s Unpacking r-cran-isoband (0.2.7-1) ... 1416s Selecting previously unselected package r-cran-mass. 1416s Preparing to unpack .../146-r-cran-mass_7.3-61-1_amd64.deb ... 1416s Unpacking r-cran-mass (7.3-61-1) ... 1416s Selecting previously unselected package r-cran-nlme. 1416s Preparing to unpack .../147-r-cran-nlme_3.1.166-1_amd64.deb ... 1416s Unpacking r-cran-nlme (3.1.166-1) ... 1416s Selecting previously unselected package r-cran-mgcv. 1416s Preparing to unpack .../148-r-cran-mgcv_1.9-1-1_amd64.deb ... 1416s Unpacking r-cran-mgcv (1.9-1-1) ... 1416s Selecting previously unselected package r-cran-farver. 1416s Preparing to unpack .../149-r-cran-farver_2.1.2-1_amd64.deb ... 1416s Unpacking r-cran-farver (2.1.2-1) ... 1416s Selecting previously unselected package r-cran-labeling. 1416s Preparing to unpack .../150-r-cran-labeling_0.4.3-1_all.deb ... 1416s Unpacking r-cran-labeling (0.4.3-1) ... 1416s Selecting previously unselected package r-cran-colorspace. 1416s Preparing to unpack .../151-r-cran-colorspace_2.1-0+dfsg-1_amd64.deb ... 1416s Unpacking r-cran-colorspace (2.1-0+dfsg-1) ... 1416s Selecting previously unselected package r-cran-munsell. 1416s Preparing to unpack .../152-r-cran-munsell_0.5.1-1_all.deb ... 1416s Unpacking r-cran-munsell (0.5.1-1) ... 1416s Selecting previously unselected package r-cran-rcolorbrewer. 1416s Preparing to unpack .../153-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 1416s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 1416s Selecting previously unselected package r-cran-viridislite. 1416s Preparing to unpack .../154-r-cran-viridislite_0.4.2-2_all.deb ... 1416s Unpacking r-cran-viridislite (0.4.2-2) ... 1416s Selecting previously unselected package r-cran-scales. 1416s Preparing to unpack .../155-r-cran-scales_1.3.0-1_all.deb ... 1416s Unpacking r-cran-scales (1.3.0-1) ... 1416s Selecting previously unselected package r-cran-fansi. 1416s Preparing to unpack .../156-r-cran-fansi_1.0.5-1_amd64.deb ... 1416s Unpacking r-cran-fansi (1.0.5-1) ... 1417s Selecting previously unselected package r-cran-magrittr. 1417s Preparing to unpack .../157-r-cran-magrittr_2.0.3-1_amd64.deb ... 1417s Unpacking r-cran-magrittr (2.0.3-1) ... 1417s Selecting previously unselected package r-cran-utf8. 1417s Preparing to unpack .../158-r-cran-utf8_1.2.4-1_amd64.deb ... 1417s Unpacking r-cran-utf8 (1.2.4-1) ... 1417s Selecting previously unselected package r-cran-vctrs. 1417s Preparing to unpack .../159-r-cran-vctrs_0.6.5-1_amd64.deb ... 1417s Unpacking r-cran-vctrs (0.6.5-1) ... 1417s Selecting previously unselected package r-cran-pillar. 1417s Preparing to unpack .../160-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 1417s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 1417s Selecting previously unselected package r-cran-pkgconfig. 1417s Preparing to unpack .../161-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 1417s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 1417s Selecting previously unselected package r-cran-tibble. 1417s Preparing to unpack .../162-r-cran-tibble_3.2.1+dfsg-2_amd64.deb ... 1417s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 1417s Selecting previously unselected package r-cran-withr. 1417s Preparing to unpack .../163-r-cran-withr_3.0.0+dfsg-1_all.deb ... 1417s Unpacking r-cran-withr (3.0.0+dfsg-1) ... 1417s Selecting previously unselected package r-cran-ggplot2. 1417s Preparing to unpack .../164-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 1417s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 1417s Selecting previously unselected package r-cran-pkgkitten. 1417s Preparing to unpack .../165-r-cran-pkgkitten_0.2.4-1_all.deb ... 1417s Unpacking r-cran-pkgkitten (0.2.4-1) ... 1417s Selecting previously unselected package r-cran-rcpp. 1417s Preparing to unpack .../166-r-cran-rcpp_1.0.13-1_amd64.deb ... 1417s Unpacking r-cran-rcpp (1.0.13-1) ... 1417s Selecting previously unselected package r-cran-rcpparmadillo. 1417s Preparing to unpack .../167-r-cran-rcpparmadillo_14.0.0-1-1_amd64.deb ... 1417s Unpacking r-cran-rcpparmadillo (14.0.0-1-1) ... 1417s Selecting previously unselected package r-bioc-deseq2. 1417s Preparing to unpack .../168-r-bioc-deseq2_1.44.0+dfsg-1_amd64.deb ... 1417s Unpacking r-bioc-deseq2 (1.44.0+dfsg-1) ... 1417s Selecting previously unselected package r-bioc-rhtslib. 1417s Preparing to unpack .../169-r-bioc-rhtslib_3.0.0+dfsg-1_amd64.deb ... 1417s Unpacking r-bioc-rhtslib (3.0.0+dfsg-1) ... 1417s Selecting previously unselected package r-bioc-rsamtools. 1417s Preparing to unpack .../170-r-bioc-rsamtools_2.20.0+dfsg-1_amd64.deb ... 1417s Unpacking r-bioc-rsamtools (2.20.0+dfsg-1) ... 1418s Selecting previously unselected package r-bioc-genomicalignments. 1418s Preparing to unpack .../171-r-bioc-genomicalignments_1.40.0-1_amd64.deb ... 1418s Unpacking r-bioc-genomicalignments (1.40.0-1) ... 1418s Selecting previously unselected package r-bioc-hsmmsinglecell. 1418s Preparing to unpack .../172-r-bioc-hsmmsinglecell_1.24.0-1_all.deb ... 1418s Unpacking r-bioc-hsmmsinglecell (1.24.0-1) ... 1418s Selecting previously unselected package r-cran-statmod. 1418s Preparing to unpack .../173-r-cran-statmod_1.5.0-1_amd64.deb ... 1418s Unpacking r-cran-statmod (1.5.0-1) ... 1418s Selecting previously unselected package r-bioc-limma. 1418s Preparing to unpack .../174-r-bioc-limma_3.60.4+dfsg-1_amd64.deb ... 1418s Unpacking r-bioc-limma (3.60.4+dfsg-1) ... 1418s Selecting previously unselected package r-cran-vgam. 1418s Preparing to unpack .../175-r-cran-vgam_1.1-9-1_amd64.deb ... 1418s Unpacking r-cran-vgam (1.1-9-1) ... 1418s Selecting previously unselected package r-cran-irlba. 1418s Preparing to unpack .../176-r-cran-irlba_2.3.5.1-4_amd64.deb ... 1418s Unpacking r-cran-irlba (2.3.5.1-4) ... 1418s Selecting previously unselected package r-cran-rcppeigen. 1418s Preparing to unpack .../177-r-cran-rcppeigen_0.3.4.0.0-1build1_amd64.deb ... 1418s Unpacking r-cran-rcppeigen (0.3.4.0.0-1build1) ... 1418s Selecting previously unselected package r-cran-ddrtree. 1418s Preparing to unpack .../178-r-cran-ddrtree_0.1.5-2_amd64.deb ... 1418s Unpacking r-cran-ddrtree (0.1.5-2) ... 1418s Selecting previously unselected package r-cran-igraph. 1418s Preparing to unpack .../179-r-cran-igraph_2.0.3-1_amd64.deb ... 1418s Unpacking r-cran-igraph (2.0.3-1) ... 1418s Selecting previously unselected package r-cran-plyr. 1418s Preparing to unpack .../180-r-cran-plyr_1.8.9-1_amd64.deb ... 1418s Unpacking r-cran-plyr (1.8.9-1) ... 1418s Selecting previously unselected package r-cran-cluster. 1418s Preparing to unpack .../181-r-cran-cluster_2.1.6-1build1_amd64.deb ... 1418s Unpacking r-cran-cluster (2.1.6-1build1) ... 1418s Selecting previously unselected package r-cran-combinat. 1418s Preparing to unpack .../182-r-cran-combinat_0.0-8-7build1_all.deb ... 1418s Unpacking r-cran-combinat (0.0-8-7build1) ... 1418s Selecting previously unselected package r-cran-fastica. 1418s Preparing to unpack .../183-r-cran-fastica_1.2-4-1_amd64.deb ... 1418s Unpacking r-cran-fastica (1.2-4-1) ... 1418s Selecting previously unselected package r-cran-rtsne. 1418s Preparing to unpack .../184-r-cran-rtsne_0.17-1_amd64.deb ... 1418s Unpacking r-cran-rtsne (0.17-1) ... 1418s Selecting previously unselected package r-cran-stringi. 1418s Preparing to unpack .../185-r-cran-stringi_1.8.3-1_amd64.deb ... 1418s Unpacking r-cran-stringi (1.8.3-1) ... 1418s Selecting previously unselected package r-cran-stringr. 1418s Preparing to unpack .../186-r-cran-stringr_1.5.1-1_all.deb ... 1418s Unpacking r-cran-stringr (1.5.1-1) ... 1418s Selecting previously unselected package r-cran-reshape2. 1418s Preparing to unpack .../187-r-cran-reshape2_1.4.4-2build1_amd64.deb ... 1418s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 1418s Selecting previously unselected package r-cran-leidenbase. 1418s Preparing to unpack .../188-r-cran-leidenbase_0.1.27-1_amd64.deb ... 1418s Unpacking r-cran-leidenbase (0.1.27-1) ... 1419s Selecting previously unselected package r-cran-generics. 1419s Preparing to unpack .../189-r-cran-generics_0.1.3-1_all.deb ... 1419s Unpacking r-cran-generics (0.1.3-1) ... 1419s Selecting previously unselected package r-cran-tidyselect. 1419s Preparing to unpack .../190-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ... 1419s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 1419s Selecting previously unselected package r-cran-dplyr. 1419s Preparing to unpack .../191-r-cran-dplyr_1.1.4-1_amd64.deb ... 1419s Unpacking r-cran-dplyr (1.1.4-1) ... 1419s Selecting previously unselected package r-cran-pheatmap. 1419s Preparing to unpack .../192-r-cran-pheatmap_1.0.12-2build1_all.deb ... 1419s Unpacking r-cran-pheatmap (1.0.12-2build1) ... 1419s Selecting previously unselected package r-cran-proxy. 1419s Preparing to unpack .../193-r-cran-proxy_0.4-27-1_amd64.deb ... 1419s Unpacking r-cran-proxy (0.4-27-1) ... 1419s Selecting previously unselected package r-cran-slam. 1419s Preparing to unpack .../194-r-cran-slam_0.1-52-1_amd64.deb ... 1419s Unpacking r-cran-slam (0.1-52-1) ... 1419s Selecting previously unselected package r-cran-gridextra. 1419s Preparing to unpack .../195-r-cran-gridextra_2.3-3build1_all.deb ... 1419s Unpacking r-cran-gridextra (2.3-3build1) ... 1419s Selecting previously unselected package r-cran-viridis. 1419s Preparing to unpack .../196-r-cran-viridis_0.6.5-1_all.deb ... 1419s Unpacking r-cran-viridis (0.6.5-1) ... 1419s Selecting previously unselected package r-cran-rann. 1419s Preparing to unpack .../197-r-cran-rann_2.6.1-1build2_amd64.deb ... 1419s Unpacking r-cran-rann (2.6.1-1build2) ... 1419s Selecting previously unselected package r-bioc-monocle. 1419s Preparing to unpack .../198-r-bioc-monocle_2.32.0-1_amd64.deb ... 1419s Unpacking r-bioc-monocle (2.32.0-1) ... 1419s Selecting previously unselected package r-cran-survival. 1419s Preparing to unpack .../199-r-cran-survival_3.7-0-1_amd64.deb ... 1419s Unpacking r-cran-survival (3.7-0-1) ... 1419s Selecting previously unselected package r-bioc-multtest. 1419s Preparing to unpack .../200-r-bioc-multtest_2.60.0-1_amd64.deb ... 1419s Unpacking r-bioc-multtest (2.60.0-1) ... 1419s Selecting previously unselected package r-cran-rjson. 1419s Preparing to unpack .../201-r-cran-rjson_0.2.21-1_amd64.deb ... 1419s Unpacking r-cran-rjson (0.2.21-1) ... 1419s Selecting previously unselected package r-cran-yaml. 1419s Preparing to unpack .../202-r-cran-yaml_2.3.8-2_amd64.deb ... 1419s Unpacking r-cran-yaml (2.3.8-2) ... 1419s Selecting previously unselected package r-cran-restfulr. 1419s Preparing to unpack .../203-r-cran-restfulr_0.0.15-1_amd64.deb ... 1419s Unpacking r-cran-restfulr (0.0.15-1) ... 1419s Selecting previously unselected package r-bioc-rtracklayer. 1419s Preparing to unpack .../204-r-bioc-rtracklayer_1.64.0-1_amd64.deb ... 1419s Unpacking r-bioc-rtracklayer (1.64.0-1) ... 1419s Selecting previously unselected package r-bioc-singlecellexperiment. 1419s Preparing to unpack .../205-r-bioc-singlecellexperiment_1.26.0+ds-1_all.deb ... 1419s Unpacking r-bioc-singlecellexperiment (1.26.0+ds-1) ... 1419s Selecting previously unselected package r-cran-digest. 1419s Preparing to unpack .../206-r-cran-digest_0.6.36-1_amd64.deb ... 1419s Unpacking r-cran-digest (0.6.36-1) ... 1419s Selecting previously unselected package r-cran-ape. 1419s Preparing to unpack .../207-r-cran-ape_5.8-1_amd64.deb ... 1419s Unpacking r-cran-ape (5.8-1) ... 1419s Selecting previously unselected package r-cran-base64enc. 1419s Preparing to unpack .../208-r-cran-base64enc_0.1-3-3_amd64.deb ... 1419s Unpacking r-cran-base64enc (0.1-3-3) ... 1419s Selecting previously unselected package r-cran-beeswarm. 1419s Preparing to unpack .../209-r-cran-beeswarm_0.4.0-1_amd64.deb ... 1419s Unpacking r-cran-beeswarm (0.4.0-1) ... 1419s Selecting previously unselected package r-cran-bit. 1419s Preparing to unpack .../210-r-cran-bit_4.0.5-1_amd64.deb ... 1419s Unpacking r-cran-bit (4.0.5-1) ... 1420s Selecting previously unselected package r-cran-bit64. 1420s Preparing to unpack .../211-r-cran-bit64_4.0.5-1_amd64.deb ... 1420s Unpacking r-cran-bit64 (4.0.5-1) ... 1420s Selecting previously unselected package r-cran-brio. 1420s Preparing to unpack .../212-r-cran-brio_1.1.5-1_amd64.deb ... 1420s Unpacking r-cran-brio (1.1.5-1) ... 1420s Selecting previously unselected package r-cran-fastmap. 1420s Preparing to unpack .../213-r-cran-fastmap_1.1.1-1_amd64.deb ... 1420s Unpacking r-cran-fastmap (1.1.1-1) ... 1420s Selecting previously unselected package r-cran-cachem. 1420s Preparing to unpack .../214-r-cran-cachem_1.0.8-1_amd64.deb ... 1420s Unpacking r-cran-cachem (1.0.8-1) ... 1420s Selecting previously unselected package r-cran-htmltools. 1420s Preparing to unpack .../215-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 1420s Unpacking r-cran-htmltools (0.5.8.1-1) ... 1420s Selecting previously unselected package r-cran-jquerylib. 1420s Preparing to unpack .../216-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 1420s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 1420s Selecting previously unselected package r-cran-memoise. 1420s Preparing to unpack .../217-r-cran-memoise_2.0.1-1_all.deb ... 1420s Unpacking r-cran-memoise (2.0.1-1) ... 1420s Selecting previously unselected package r-cran-fs. 1420s Preparing to unpack .../218-r-cran-fs_1.6.4+dfsg-1_amd64.deb ... 1420s Unpacking r-cran-fs (1.6.4+dfsg-1) ... 1420s Selecting previously unselected package r-cran-rappdirs. 1420s Preparing to unpack .../219-r-cran-rappdirs_0.3.3-1_amd64.deb ... 1420s Unpacking r-cran-rappdirs (0.3.3-1) ... 1420s Selecting previously unselected package r-cran-sass. 1420s Preparing to unpack .../220-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 1420s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 1420s Selecting previously unselected package r-cran-bslib. 1420s Preparing to unpack .../221-r-cran-bslib_0.7.0+dfsg-1_all.deb ... 1420s Unpacking r-cran-bslib (0.7.0+dfsg-1) ... 1420s Selecting previously unselected package r-cran-cairo. 1420s Preparing to unpack .../222-r-cran-cairo_1.6-2-1_amd64.deb ... 1420s Unpacking r-cran-cairo (1.6-2-1) ... 1420s Selecting previously unselected package r-cran-ps. 1420s Preparing to unpack .../223-r-cran-ps_1.7.6-1_amd64.deb ... 1420s Unpacking r-cran-ps (1.7.6-1) ... 1420s Selecting previously unselected package r-cran-processx. 1420s Preparing to unpack .../224-r-cran-processx_3.8.4-1_amd64.deb ... 1420s Unpacking r-cran-processx (3.8.4-1) ... 1420s Selecting previously unselected package r-cran-callr. 1420s Preparing to unpack .../225-r-cran-callr_3.7.6-1_all.deb ... 1420s Unpacking r-cran-callr (3.7.6-1) ... 1420s Selecting previously unselected package r-cran-class. 1420s Preparing to unpack .../226-r-cran-class_7.3-22-2build1_amd64.deb ... 1420s Unpacking r-cran-class (7.3-22-2build1) ... 1420s Selecting previously unselected package r-cran-e1071. 1420s Preparing to unpack .../227-r-cran-e1071_1.7-14-1_amd64.deb ... 1420s Unpacking r-cran-e1071 (1.7-14-1) ... 1420s Selecting previously unselected package r-cran-iterators. 1420s Preparing to unpack .../228-r-cran-iterators_1.0.14-1_all.deb ... 1420s Unpacking r-cran-iterators (1.0.14-1) ... 1420s Selecting previously unselected package r-cran-foreach. 1420s Preparing to unpack .../229-r-cran-foreach_1.5.2-1_all.deb ... 1420s Unpacking r-cran-foreach (1.5.2-1) ... 1420s Selecting previously unselected package r-cran-data.table. 1420s Preparing to unpack .../230-r-cran-data.table_1.15.4+dfsg-2.2_amd64.deb ... 1420s Unpacking r-cran-data.table (1.15.4+dfsg-2.2) ... 1420s Selecting previously unselected package r-cran-modelmetrics. 1420s Preparing to unpack .../231-r-cran-modelmetrics_1.2.2.2-1build1_amd64.deb ... 1420s Unpacking r-cran-modelmetrics (1.2.2.2-1build1) ... 1420s Selecting previously unselected package r-cran-proc. 1420s Preparing to unpack .../232-r-cran-proc_1.18.5-1_amd64.deb ... 1420s Unpacking r-cran-proc (1.18.5-1) ... 1420s Selecting previously unselected package r-cran-tzdb. 1421s Preparing to unpack .../233-r-cran-tzdb_0.4.0-2_amd64.deb ... 1421s Unpacking r-cran-tzdb (0.4.0-2) ... 1421s Selecting previously unselected package r-cran-clock. 1421s Preparing to unpack .../234-r-cran-clock_0.7.0-1.1_amd64.deb ... 1421s Unpacking r-cran-clock (0.7.0-1.1) ... 1421s Selecting previously unselected package r-cran-ellipsis. 1421s Preparing to unpack .../235-r-cran-ellipsis_0.3.2-2_amd64.deb ... 1421s Unpacking r-cran-ellipsis (0.3.2-2) ... 1421s Selecting previously unselected package r-cran-gower. 1421s Preparing to unpack .../236-r-cran-gower_1.0.1-1_amd64.deb ... 1421s Unpacking r-cran-gower (1.0.1-1) ... 1421s Selecting previously unselected package r-cran-hardhat. 1421s Preparing to unpack .../237-r-cran-hardhat_1.4.0+dfsg-1_all.deb ... 1421s Unpacking r-cran-hardhat (1.4.0+dfsg-1) ... 1421s Selecting previously unselected package r-cran-rpart. 1421s Preparing to unpack .../238-r-cran-rpart_4.1.23-1build1_amd64.deb ... 1421s Unpacking r-cran-rpart (4.1.23-1build1) ... 1421s Selecting previously unselected package r-cran-nnet. 1421s Preparing to unpack .../239-r-cran-nnet_7.3-19-2build1_amd64.deb ... 1421s Unpacking r-cran-nnet (7.3-19-2build1) ... 1421s Selecting previously unselected package r-cran-shape. 1421s Preparing to unpack .../240-r-cran-shape_1.4.6-1_all.deb ... 1421s Unpacking r-cran-shape (1.4.6-1) ... 1421s Selecting previously unselected package r-cran-diagram. 1421s Preparing to unpack .../241-r-cran-diagram_1.6.5-2_all.deb ... 1421s Unpacking r-cran-diagram (1.6.5-2) ... 1421s Selecting previously unselected package r-cran-kernsmooth. 1421s Preparing to unpack .../242-r-cran-kernsmooth_2.23-24-1_amd64.deb ... 1421s Unpacking r-cran-kernsmooth (2.23-24-1) ... 1421s Selecting previously unselected package r-cran-globals. 1421s Preparing to unpack .../243-r-cran-globals_0.16.3-1_all.deb ... 1421s Unpacking r-cran-globals (0.16.3-1) ... 1421s Selecting previously unselected package r-cran-listenv. 1421s Preparing to unpack .../244-r-cran-listenv_0.9.1+dfsg-1_all.deb ... 1421s Unpacking r-cran-listenv (0.9.1+dfsg-1) ... 1421s Selecting previously unselected package r-cran-parallelly. 1421s Preparing to unpack .../245-r-cran-parallelly_1.37.1-1build1_amd64.deb ... 1421s Unpacking r-cran-parallelly (1.37.1-1build1) ... 1421s Selecting previously unselected package r-cran-future. 1421s Preparing to unpack .../246-r-cran-future_1.33.1+dfsg-1_all.deb ... 1421s Unpacking r-cran-future (1.33.1+dfsg-1) ... 1421s Selecting previously unselected package r-cran-future.apply. 1421s Preparing to unpack .../247-r-cran-future.apply_1.11.2+dfsg-1_all.deb ... 1421s Unpacking r-cran-future.apply (1.11.2+dfsg-1) ... 1421s Selecting previously unselected package r-cran-numderiv. 1421s Preparing to unpack .../248-r-cran-numderiv_2016.8-1.1-3_all.deb ... 1421s Unpacking r-cran-numderiv (2016.8-1.1-3) ... 1421s Selecting previously unselected package r-cran-progressr. 1421s Preparing to unpack .../249-r-cran-progressr_0.14.0-1_all.deb ... 1421s Unpacking r-cran-progressr (0.14.0-1) ... 1421s Selecting previously unselected package r-cran-squarem. 1421s Preparing to unpack .../250-r-cran-squarem_2021.1-1_all.deb ... 1421s Unpacking r-cran-squarem (2021.1-1) ... 1421s Selecting previously unselected package r-cran-lava. 1421s Preparing to unpack .../251-r-cran-lava_1.7.3+dfsg-1_all.deb ... 1421s Unpacking r-cran-lava (1.7.3+dfsg-1) ... 1421s Selecting previously unselected package r-cran-prodlim. 1421s Preparing to unpack .../252-r-cran-prodlim_2024.06.25-1_amd64.deb ... 1421s Unpacking r-cran-prodlim (2024.06.25-1) ... 1421s Selecting previously unselected package r-cran-ipred. 1421s Preparing to unpack .../253-r-cran-ipred_0.9-14-1_amd64.deb ... 1421s Unpacking r-cran-ipred (0.9-14-1) ... 1421s Selecting previously unselected package r-cran-timechange. 1421s Preparing to unpack .../254-r-cran-timechange_0.3.0-1_amd64.deb ... 1421s Unpacking r-cran-timechange (0.3.0-1) ... 1421s Selecting previously unselected package r-cran-lubridate. 1421s Preparing to unpack .../255-r-cran-lubridate_1.9.3+dfsg-1_amd64.deb ... 1421s Unpacking r-cran-lubridate (1.9.3+dfsg-1) ... 1421s Selecting previously unselected package r-cran-purrr. 1421s Preparing to unpack .../256-r-cran-purrr_1.0.2-1_amd64.deb ... 1421s Unpacking r-cran-purrr (1.0.2-1) ... 1421s Selecting previously unselected package r-cran-tidyr. 1421s Preparing to unpack .../257-r-cran-tidyr_1.3.1-1_amd64.deb ... 1421s Unpacking r-cran-tidyr (1.3.1-1) ... 1422s Selecting previously unselected package r-cran-timedate. 1422s Preparing to unpack .../258-r-cran-timedate_4032.109-1_amd64.deb ... 1422s Unpacking r-cran-timedate (4032.109-1) ... 1422s Selecting previously unselected package r-cran-recipes. 1422s Preparing to unpack .../259-r-cran-recipes_1.0.10+dfsg-2_all.deb ... 1422s Unpacking r-cran-recipes (1.0.10+dfsg-2) ... 1422s Selecting previously unselected package r-cran-caret. 1422s Preparing to unpack .../260-r-cran-caret_6.0-94+dfsg-1_amd64.deb ... 1422s Unpacking r-cran-caret (6.0-94+dfsg-1) ... 1422s Selecting previously unselected package r-cran-catools. 1422s Preparing to unpack .../261-r-cran-catools_1.18.2-1_amd64.deb ... 1422s Unpacking r-cran-catools (1.18.2-1) ... 1422s Selecting previously unselected package r-cran-evaluate. 1422s Preparing to unpack .../262-r-cran-evaluate_0.24.0-1_all.deb ... 1422s Unpacking r-cran-evaluate (0.24.0-1) ... 1422s Selecting previously unselected package r-cran-xfun. 1422s Preparing to unpack .../263-r-cran-xfun_0.45+dfsg-1_amd64.deb ... 1422s Unpacking r-cran-xfun (0.45+dfsg-1) ... 1422s Selecting previously unselected package r-cran-highr. 1422s Preparing to unpack .../264-r-cran-highr_0.11+dfsg-1_all.deb ... 1422s Unpacking r-cran-highr (0.11+dfsg-1) ... 1422s Selecting previously unselected package libjs-mathjax. 1422s Preparing to unpack .../265-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 1422s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 1423s Selecting previously unselected package r-cran-knitr. 1423s Preparing to unpack .../266-r-cran-knitr_1.47+dfsg-1_all.deb ... 1423s Unpacking r-cran-knitr (1.47+dfsg-1) ... 1423s Selecting previously unselected package r-cran-fontawesome. 1423s Preparing to unpack .../267-r-cran-fontawesome_0.5.2-1_all.deb ... 1423s Unpacking r-cran-fontawesome (0.5.2-1) ... 1423s Selecting previously unselected package r-cran-tinytex. 1423s Preparing to unpack .../268-r-cran-tinytex_0.51-1_all.deb ... 1423s Unpacking r-cran-tinytex (0.51-1) ... 1423s Selecting previously unselected package libjs-modernizr. 1423s Preparing to unpack .../269-libjs-modernizr_3.13.0-0.1_all.deb ... 1423s Unpacking libjs-modernizr (3.13.0-0.1) ... 1423s Selecting previously unselected package r-cran-later. 1423s Preparing to unpack .../270-r-cran-later_1.3.2+dfsg-1_amd64.deb ... 1423s Unpacking r-cran-later (1.3.2+dfsg-1) ... 1423s Selecting previously unselected package r-cran-promises. 1423s Preparing to unpack .../271-r-cran-promises_1.3.0+dfsg-1_amd64.deb ... 1423s Unpacking r-cran-promises (1.3.0+dfsg-1) ... 1423s Selecting previously unselected package r-cran-httpuv. 1423s Preparing to unpack .../272-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 1423s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 1423s Selecting previously unselected package r-cran-xtable. 1423s Preparing to unpack .../273-r-cran-xtable_1%3a1.8-4-2_all.deb ... 1423s Unpacking r-cran-xtable (1:1.8-4-2) ... 1423s Selecting previously unselected package r-cran-sourcetools. 1423s Preparing to unpack .../274-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 1423s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 1423s Selecting previously unselected package r-cran-commonmark. 1423s Preparing to unpack .../275-r-cran-commonmark_1.9.1-1_amd64.deb ... 1423s Unpacking r-cran-commonmark (1.9.1-1) ... 1423s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 1423s Preparing to unpack .../276-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 1423s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 1423s Selecting previously unselected package r-cran-shiny. 1423s Preparing to unpack .../277-r-cran-shiny_1.8.1.1+dfsg-1_all.deb ... 1423s Unpacking r-cran-shiny (1.8.1.1+dfsg-1) ... 1423s Selecting previously unselected package r-cran-rmarkdown. 1423s Preparing to unpack .../278-r-cran-rmarkdown_2.27+dfsg-1_all.deb ... 1423s Unpacking r-cran-rmarkdown (2.27+dfsg-1) ... 1423s Selecting previously unselected package r-cran-htmlwidgets. 1423s Preparing to unpack .../279-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 1423s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 1423s Selecting previously unselected package r-cran-miniui. 1423s Preparing to unpack .../280-r-cran-miniui_0.1.1.1-3build1_all.deb ... 1423s Unpacking r-cran-miniui (0.1.1.1-3build1) ... 1423s Selecting previously unselected package r-cran-shinyjs. 1423s Preparing to unpack .../281-r-cran-shinyjs_2.1.0-1_all.deb ... 1423s Unpacking r-cran-shinyjs (2.1.0-1) ... 1423s Selecting previously unselected package r-cran-colourpicker. 1423s Preparing to unpack .../282-r-cran-colourpicker_1.3.0+dfsg-1_all.deb ... 1423s Unpacking r-cran-colourpicker (1.3.0+dfsg-1) ... 1423s Selecting previously unselected package r-cran-conquer. 1423s Preparing to unpack .../283-r-cran-conquer_1.3.3-1_amd64.deb ... 1423s Unpacking r-cran-conquer (1.3.3-1) ... 1423s Selecting previously unselected package r-cran-cowplot. 1423s Preparing to unpack .../284-r-cran-cowplot_1.1.3+dfsg-1_all.deb ... 1423s Unpacking r-cran-cowplot (1.1.3+dfsg-1) ... 1424s Selecting previously unselected package r-cran-lazyeval. 1424s Preparing to unpack .../285-r-cran-lazyeval_0.2.2-1build1_amd64.deb ... 1424s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 1424s Selecting previously unselected package r-cran-crosstalk. 1424s Preparing to unpack .../286-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 1424s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 1424s Selecting previously unselected package r-cran-deldir. 1424s Preparing to unpack .../287-r-cran-deldir_2.0-4-1build1_amd64.deb ... 1424s Unpacking r-cran-deldir (2.0-4-1build1) ... 1424s Selecting previously unselected package r-cran-deoptimr. 1424s Preparing to unpack .../288-r-cran-deoptimr_1.1-3-1_all.deb ... 1424s Unpacking r-cran-deoptimr (1.1-3-1) ... 1424s Selecting previously unselected package r-cran-desc. 1424s Preparing to unpack .../289-r-cran-desc_1.4.3-1_all.deb ... 1424s Unpacking r-cran-desc (1.4.3-1) ... 1424s Selecting previously unselected package r-cran-diffobj. 1424s Preparing to unpack .../290-r-cran-diffobj_0.3.5-1_amd64.deb ... 1424s Unpacking r-cran-diffobj (0.3.5-1) ... 1424s Selecting previously unselected package r-cran-dotcall64. 1424s Preparing to unpack .../291-r-cran-dotcall64_1.1-1-1_amd64.deb ... 1424s Unpacking r-cran-dotcall64 (1.1-1-1) ... 1424s Selecting previously unselected package r-cran-sitmo. 1424s Preparing to unpack .../292-r-cran-sitmo_2.0.2-1_amd64.deb ... 1424s Unpacking r-cran-sitmo (2.0.2-1) ... 1424s Selecting previously unselected package r-cran-dqrng. 1424s Preparing to unpack .../293-r-cran-dqrng_0.3.2+dfsg-1_amd64.deb ... 1424s Unpacking r-cran-dqrng (0.3.2+dfsg-1) ... 1424s Selecting previously unselected package r-cran-fastdummies. 1424s Preparing to unpack .../294-r-cran-fastdummies_1.7.3-2_all.deb ... 1424s Unpacking r-cran-fastdummies (1.7.3-2) ... 1424s Selecting previously unselected package r-cran-fitdistrplus. 1424s Preparing to unpack .../295-r-cran-fitdistrplus_1.1-11-1_all.deb ... 1424s Unpacking r-cran-fitdistrplus (1.1-11-1) ... 1424s Selecting previously unselected package r-cran-fnn. 1424s Preparing to unpack .../296-r-cran-fnn_1.1.4-1_amd64.deb ... 1424s Unpacking r-cran-fnn (1.1.4-1) ... 1424s Selecting previously unselected package r-cran-gtools. 1424s Preparing to unpack .../297-r-cran-gtools_3.9.5-1_amd64.deb ... 1424s Unpacking r-cran-gtools (3.9.5-1) ... 1424s Selecting previously unselected package r-cran-gdata. 1424s Preparing to unpack .../298-r-cran-gdata_3.0.1-1_all.deb ... 1424s Unpacking r-cran-gdata (3.0.1-1) ... 1424s Selecting previously unselected package r-cran-vipor. 1424s Preparing to unpack .../299-r-cran-vipor_0.4.7-1_all.deb ... 1424s Unpacking r-cran-vipor (0.4.7-1) ... 1424s Selecting previously unselected package r-cran-ggbeeswarm. 1424s Preparing to unpack .../300-r-cran-ggbeeswarm_0.7.2-1_all.deb ... 1424s Unpacking r-cran-ggbeeswarm (0.7.2-1) ... 1424s Selecting previously unselected package r-cran-png. 1424s Preparing to unpack .../301-r-cran-png_0.1-8-1build2_amd64.deb ... 1424s Unpacking r-cran-png (0.1-8-1build2) ... 1424s Selecting previously unselected package r-cran-systemfonts. 1424s Preparing to unpack .../302-r-cran-systemfonts_1.1.0-1_amd64.deb ... 1424s Unpacking r-cran-systemfonts (1.1.0-1) ... 1424s Selecting previously unselected package r-cran-textshaping. 1424s Preparing to unpack .../303-r-cran-textshaping_0.3.7-2_amd64.deb ... 1424s Unpacking r-cran-textshaping (0.3.7-2) ... 1424s Selecting previously unselected package r-cran-ragg. 1424s Preparing to unpack .../304-r-cran-ragg_1.3.2-1_amd64.deb ... 1424s Unpacking r-cran-ragg (1.3.2-1) ... 1424s Selecting previously unselected package r-cran-ggrastr. 1424s Preparing to unpack .../305-r-cran-ggrastr_1.0.2-1_all.deb ... 1424s Unpacking r-cran-ggrastr (1.0.2-1) ... 1425s Selecting previously unselected package r-cran-ggrepel. 1425s Preparing to unpack .../306-r-cran-ggrepel_0.9.5-2_amd64.deb ... 1425s Unpacking r-cran-ggrepel (0.9.5-2) ... 1425s Selecting previously unselected package r-cran-ggridges. 1425s Preparing to unpack .../307-r-cran-ggridges_0.5.6-1_all.deb ... 1425s Unpacking r-cran-ggridges (0.5.6-1) ... 1425s Selecting previously unselected package r-cran-goftest. 1425s Preparing to unpack .../308-r-cran-goftest_1.2-3-1_amd64.deb ... 1425s Unpacking r-cran-goftest (1.2-3-1) ... 1425s Selecting previously unselected package r-cran-gplots. 1425s Preparing to unpack .../309-r-cran-gplots_3.2.0-1_all.deb ... 1425s Unpacking r-cran-gplots (3.2.0-1) ... 1425s Selecting previously unselected package r-cran-hdf5r. 1425s Preparing to unpack .../310-r-cran-hdf5r_1.3.9+dfsg-1build2_amd64.deb ... 1425s Unpacking r-cran-hdf5r (1.3.9+dfsg-1build2) ... 1425s Selecting previously unselected package r-cran-rprojroot. 1425s Preparing to unpack .../311-r-cran-rprojroot_2.0.4-1_all.deb ... 1425s Unpacking r-cran-rprojroot (2.0.4-1) ... 1425s Selecting previously unselected package r-cran-here. 1425s Preparing to unpack .../312-r-cran-here_1.0.1-2_all.deb ... 1425s Unpacking r-cran-here (1.0.1-2) ... 1425s Selecting previously unselected package r-cran-ica. 1425s Preparing to unpack .../313-r-cran-ica_1.0-3-1_all.deb ... 1425s Unpacking r-cran-ica (1.0-3-1) ... 1425s Selecting previously unselected package r-cran-kernlab. 1425s Preparing to unpack .../314-r-cran-kernlab_0.9-33-1_amd64.deb ... 1425s Unpacking r-cran-kernlab (0.9-33-1) ... 1425s Selecting previously unselected package r-cran-rcpptoml. 1425s Preparing to unpack .../315-r-cran-rcpptoml_0.2.2+dfsg-1_amd64.deb ... 1425s Unpacking r-cran-rcpptoml (0.2.2+dfsg-1) ... 1425s Selecting previously unselected package r-cran-reticulate. 1425s Preparing to unpack .../316-r-cran-reticulate_1.35.0+dfsg-1_amd64.deb ... 1425s Unpacking r-cran-reticulate (1.35.0+dfsg-1) ... 1425s Selecting previously unselected package r-cran-leiden. 1425s Preparing to unpack .../317-r-cran-leiden_0.4.3.1+dfsg-1_all.deb ... 1425s Unpacking r-cran-leiden (0.4.3.1+dfsg-1) ... 1425s Selecting previously unselected package r-cran-zoo. 1425s Preparing to unpack .../318-r-cran-zoo_1.8-12-2_amd64.deb ... 1425s Unpacking r-cran-zoo (1.8-12-2) ... 1425s Selecting previously unselected package r-cran-lmtest. 1425s Preparing to unpack .../319-r-cran-lmtest_0.9.40-1_amd64.deb ... 1425s Unpacking r-cran-lmtest (0.9.40-1) ... 1425s Selecting previously unselected package r-cran-mathjaxr. 1425s Preparing to unpack .../320-r-cran-mathjaxr_1.6-0-1_all.deb ... 1425s Unpacking r-cran-mathjaxr (1.6-0-1) ... 1425s Selecting previously unselected package r-cran-matrixmodels. 1425s Preparing to unpack .../321-r-cran-matrixmodels_0.5-3-1_all.deb ... 1425s Unpacking r-cran-matrixmodels (0.5-3-1) ... 1425s Selecting previously unselected package r-cran-rbibutils. 1425s Preparing to unpack .../322-r-cran-rbibutils_2.2.16-1_amd64.deb ... 1425s Unpacking r-cran-rbibutils (2.2.16-1) ... 1425s Selecting previously unselected package r-cran-rdpack. 1425s Preparing to unpack .../323-r-cran-rdpack_2.6-1_all.deb ... 1425s Unpacking r-cran-rdpack (2.6-1) ... 1425s Selecting previously unselected package r-cran-mnormt. 1425s Preparing to unpack .../324-r-cran-mnormt_2.1.1-2_amd64.deb ... 1425s Unpacking r-cran-mnormt (2.1.1-2) ... 1425s Selecting previously unselected package r-cran-sparsem. 1425s Preparing to unpack .../325-r-cran-sparsem_1.84-2-1_amd64.deb ... 1425s Unpacking r-cran-sparsem (1.84-2-1) ... 1426s Selecting previously unselected package r-cran-quantreg. 1426s Preparing to unpack .../326-r-cran-quantreg_5.98-1_amd64.deb ... 1426s Unpacking r-cran-quantreg (5.98-1) ... 1426s Selecting previously unselected package r-cran-sn. 1426s Preparing to unpack .../327-r-cran-sn_2.1.1-2_all.deb ... 1426s Unpacking r-cran-sn (2.1.1-2) ... 1426s Selecting previously unselected package r-cran-mvtnorm. 1426s Preparing to unpack .../328-r-cran-mvtnorm_1.2-5-1_amd64.deb ... 1426s Unpacking r-cran-mvtnorm (1.2-5-1) ... 1426s Selecting previously unselected package r-cran-tfisher. 1426s Preparing to unpack .../329-r-cran-tfisher_0.2.0-3_all.deb ... 1426s Unpacking r-cran-tfisher (0.2.0-3) ... 1426s Selecting previously unselected package r-cran-plotrix. 1426s Preparing to unpack .../330-r-cran-plotrix_3.8-4-1_all.deb ... 1426s Unpacking r-cran-plotrix (3.8-4-1) ... 1426s Selecting previously unselected package r-cran-th.data. 1426s Preparing to unpack .../331-r-cran-th.data_1.1-2-2_all.deb ... 1426s Unpacking r-cran-th.data (1.1-2-2) ... 1426s Selecting previously unselected package r-cran-sandwich. 1426s Preparing to unpack .../332-r-cran-sandwich_3.1-0-1_all.deb ... 1426s Unpacking r-cran-sandwich (3.1-0-1) ... 1426s Selecting previously unselected package r-cran-multcomp. 1426s Preparing to unpack .../333-r-cran-multcomp_1.4-26-2_all.deb ... 1426s Unpacking r-cran-multcomp (1.4-26-2) ... 1426s Selecting previously unselected package r-cran-mutoss. 1426s Preparing to unpack .../334-r-cran-mutoss_0.1-13-1_all.deb ... 1426s Unpacking r-cran-mutoss (0.1-13-1) ... 1426s Selecting previously unselected package r-cran-robustbase. 1426s Preparing to unpack .../335-r-cran-robustbase_0.99-3-1_amd64.deb ... 1426s Unpacking r-cran-robustbase (0.99-3-1) ... 1426s Selecting previously unselected package r-cran-qqconf. 1426s Preparing to unpack .../336-r-cran-qqconf_1.3.2+dfsg-1_amd64.deb ... 1426s Unpacking r-cran-qqconf (1.3.2+dfsg-1) ... 1426s Selecting previously unselected package r-cran-metap. 1426s Preparing to unpack .../337-r-cran-metap_1.9-1_all.deb ... 1426s Unpacking r-cran-metap (1.9-1) ... 1426s Selecting previously unselected package r-cran-plotly. 1426s Preparing to unpack .../338-r-cran-plotly_4.10.4+dfsg-2_all.deb ... 1426s Unpacking r-cran-plotly (4.10.4+dfsg-2) ... 1426s Selecting previously unselected package r-cran-segmented. 1426s Preparing to unpack .../339-r-cran-segmented_2.1-0-1_all.deb ... 1426s Unpacking r-cran-segmented (2.1-0-1) ... 1426s Selecting previously unselected package r-cran-mixtools. 1426s Preparing to unpack .../340-r-cran-mixtools_2.0.0-1_amd64.deb ... 1426s Unpacking r-cran-mixtools (2.0.0-1) ... 1426s Selecting previously unselected package r-cran-patchwork. 1426s Preparing to unpack .../341-r-cran-patchwork_1.2.0-1_all.deb ... 1426s Unpacking r-cran-patchwork (1.2.0-1) ... 1427s Selecting previously unselected package r-cran-pbapply. 1427s Preparing to unpack .../342-r-cran-pbapply_1.7-2-1_all.deb ... 1427s Unpacking r-cran-pbapply (1.7-2-1) ... 1427s Selecting previously unselected package r-cran-pkgbuild. 1427s Preparing to unpack .../343-r-cran-pkgbuild_1.4.4-1_all.deb ... 1427s Unpacking r-cran-pkgbuild (1.4.4-1) ... 1427s Selecting previously unselected package r-cran-pkgload. 1427s Preparing to unpack .../344-r-cran-pkgload_1.4.0-1_all.deb ... 1427s Unpacking r-cran-pkgload (1.4.0-1) ... 1427s Selecting previously unselected package r-cran-polyclip. 1427s Preparing to unpack .../345-r-cran-polyclip_1.10-6-1_amd64.deb ... 1427s Unpacking r-cran-polyclip (1.10-6-1) ... 1427s Selecting previously unselected package r-cran-praise. 1427s Preparing to unpack .../346-r-cran-praise_1.0.0-4build1_all.deb ... 1427s Unpacking r-cran-praise (1.0.0-4build1) ... 1427s Selecting previously unselected package r-cran-r.methodss3. 1427s Preparing to unpack .../347-r-cran-r.methodss3_1.8.2-1_all.deb ... 1427s Unpacking r-cran-r.methodss3 (1.8.2-1) ... 1427s Selecting previously unselected package r-cran-r.oo. 1427s Preparing to unpack .../348-r-cran-r.oo_1.26.0-1_all.deb ... 1427s Unpacking r-cran-r.oo (1.26.0-1) ... 1427s Selecting previously unselected package r-cran-r.utils. 1427s Preparing to unpack .../349-r-cran-r.utils_2.12.3-1_all.deb ... 1427s Unpacking r-cran-r.utils (2.12.3-1) ... 1427s Selecting previously unselected package r-cran-rcppannoy. 1427s Preparing to unpack .../350-r-cran-rcppannoy_0.0.22-1_amd64.deb ... 1427s Unpacking r-cran-rcppannoy (0.0.22-1) ... 1427s Selecting previously unselected package r-cran-rcpphnsw. 1427s Preparing to unpack .../351-r-cran-rcpphnsw_0.5.0+ds-1_amd64.deb ... 1427s Unpacking r-cran-rcpphnsw (0.5.0+ds-1) ... 1427s Selecting previously unselected package r-cran-rcppprogress. 1427s Preparing to unpack .../352-r-cran-rcppprogress_0.4.2-2build1_all.deb ... 1427s Unpacking r-cran-rcppprogress (0.4.2-2build1) ... 1427s Selecting previously unselected package r-cran-rematch2. 1427s Preparing to unpack .../353-r-cran-rematch2_2.1.2-2build1_all.deb ... 1427s Unpacking r-cran-rematch2 (2.1.2-2build1) ... 1427s Selecting previously unselected package r-cran-rocr. 1427s Preparing to unpack .../354-r-cran-rocr_1.0-11-3_all.deb ... 1427s Unpacking r-cran-rocr (1.0-11-3) ... 1427s Selecting previously unselected package r-cran-rspectra. 1427s Preparing to unpack .../355-r-cran-rspectra_0.16-1-1_amd64.deb ... 1427s Unpacking r-cran-rspectra (0.16-1-1) ... 1427s Selecting previously unselected package r-cran-rsvd. 1427s Preparing to unpack .../356-r-cran-rsvd_1.0.5-1_all.deb ... 1427s Unpacking r-cran-rsvd (1.0.5-1) ... 1427s Selecting previously unselected package r-cran-scattermore. 1427s Preparing to unpack .../357-r-cran-scattermore_1.2-1_amd64.deb ... 1427s Unpacking r-cran-scattermore (1.2-1) ... 1427s Selecting previously unselected package r-cran-sctransform. 1427s Preparing to unpack .../358-r-cran-sctransform_0.4.1-1_amd64.deb ... 1427s Unpacking r-cran-sctransform (0.4.1-1) ... 1427s Selecting previously unselected package r-cran-sp. 1427s Preparing to unpack .../359-r-cran-sp_1%3a2.1-2+dfsg-1_amd64.deb ... 1427s Unpacking r-cran-sp (1:2.1-2+dfsg-1) ... 1427s Selecting previously unselected package r-cran-spam. 1427s Preparing to unpack .../360-r-cran-spam_2.10-0-1_amd64.deb ... 1427s Unpacking r-cran-spam (2.10-0-1) ... 1427s Selecting previously unselected package r-cran-seuratobject. 1428s Preparing to unpack .../361-r-cran-seuratobject_5.0.2-1_amd64.deb ... 1428s Unpacking r-cran-seuratobject (5.0.2-1) ... 1428s Selecting previously unselected package r-cran-spatstat.utils. 1428s Preparing to unpack .../362-r-cran-spatstat.utils_3.0-4-1_amd64.deb ... 1428s Unpacking r-cran-spatstat.utils (3.0-4-1) ... 1428s Selecting previously unselected package r-cran-spatstat.data. 1428s Preparing to unpack .../363-r-cran-spatstat.data_3.0-4-1_all.deb ... 1428s Unpacking r-cran-spatstat.data (3.0-4-1) ... 1428s Selecting previously unselected package r-cran-spatstat.geom. 1428s Preparing to unpack .../364-r-cran-spatstat.geom_3.2-9-2_amd64.deb ... 1428s Unpacking r-cran-spatstat.geom (3.2-9-2) ... 1428s Selecting previously unselected package r-cran-spatstat.random. 1428s Preparing to unpack .../365-r-cran-spatstat.random_3.2-3-1_amd64.deb ... 1428s Unpacking r-cran-spatstat.random (3.2-3-1) ... 1428s Selecting previously unselected package r-cran-tensor. 1428s Preparing to unpack .../366-r-cran-tensor_1.5-4_all.deb ... 1428s Unpacking r-cran-tensor (1.5-4) ... 1428s Selecting previously unselected package r-cran-spatstat.sparse. 1428s Preparing to unpack .../367-r-cran-spatstat.sparse_3.0-3-1_amd64.deb ... 1428s Unpacking r-cran-spatstat.sparse (3.0-3-1) ... 1428s Selecting previously unselected package r-cran-spatstat.explore. 1428s Preparing to unpack .../368-r-cran-spatstat.explore_3.2-7-1_amd64.deb ... 1428s Unpacking r-cran-spatstat.explore (3.2-7-1) ... 1428s Selecting previously unselected package r-cran-uwot. 1428s Preparing to unpack .../369-r-cran-uwot_0.1.16-2_amd64.deb ... 1428s Unpacking r-cran-uwot (0.1.16-2) ... 1428s Selecting previously unselected package r-cran-seurat. 1428s Preparing to unpack .../370-r-cran-seurat_5.1.0-1_amd64.deb ... 1428s Unpacking r-cran-seurat (5.1.0-1) ... 1428s Selecting previously unselected package r-cran-waldo. 1428s Preparing to unpack .../371-r-cran-waldo_0.5.2-1build1_all.deb ... 1428s Unpacking r-cran-waldo (0.5.2-1build1) ... 1428s Selecting previously unselected package r-cran-testthat. 1428s Preparing to unpack .../372-r-cran-testthat_3.2.1.1-1_amd64.deb ... 1428s Unpacking r-cran-testthat (3.2.1.1-1) ... 1428s Selecting previously unselected package autopkgtest-satdep. 1428s Preparing to unpack .../373-1-autopkgtest-satdep.deb ... 1428s Unpacking autopkgtest-satdep (0) ... 1428s Setting up libjs-json (0~20221030+~1.0.8-1) ... 1428s Setting up javascript-common (11+nmu1) ... 1428s Setting up libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 1428s Setting up libpixman-1-0:amd64 (0.42.2-1build1) ... 1428s Setting up libsharpyuv0:amd64 (1.4.0-0.1) ... 1428s Setting up libpaper1:amd64 (1.1.29build1) ... 1428s 1428s Creating config file /etc/papersize with new version 1429s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 1429s Setting up liblerc4:amd64 (4.0.0+ds-4ubuntu2) ... 1429s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 1429s Setting up libxrender1:amd64 (1:0.9.10-1.1build1) ... 1429s Setting up libdatrie1:amd64 (0.2.13-3build1) ... 1429s Setting up libjs-popper.js (1.16.1+ds-6) ... 1429s Setting up libxcb-render0:amd64 (1.17.0-2) ... 1429s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 1429s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 1429s Setting up unzip (6.0-28ubuntu6) ... 1429s Setting up x11-common (1:7.7+23ubuntu3) ... 1429s Setting up node-html5shiv (3.7.3+dfsg-5) ... 1429s Setting up libdeflate0:amd64 (1.21-1) ... 1429s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 1429s Setting up libxcb-shm0:amd64 (1.17.0-2) ... 1429s Setting up libpaper-utils (1.1.29build1) ... 1429s Setting up libgomp1:amd64 (14.2.0-7ubuntu1) ... 1429s Setting up libjs-modernizr (3.13.0-0.1) ... 1429s Setting up libjbig0:amd64 (2.1-6.1ubuntu2) ... 1429s Setting up libaec0:amd64 (1.1.3-1) ... 1429s Setting up libjs-es5-shim (4.6.7-2) ... 1429s Setting up zip (3.0-14) ... 1429s Setting up libblas3:amd64 (3.12.0-3build2) ... 1429s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 1429s Setting up libquadmath0:amd64 (14.2.0-7ubuntu1) ... 1429s Setting up libjs-d3 (3.5.17-4) ... 1429s Setting up fonts-dejavu-mono (2.37-8) ... 1429s Setting up libtcl8.6:amd64 (8.6.14+dfsg-1build1) ... 1429s Setting up fonts-dejavu-core (2.37-8) ... 1429s Setting up libjpeg-turbo8:amd64 (2.1.5-2ubuntu2) ... 1429s Setting up libltdl7:amd64 (2.4.7-7build1) ... 1429s Setting up libfftw3-double3:amd64 (3.3.10-1ubuntu4) ... 1429s Setting up libgfortran5:amd64 (14.2.0-7ubuntu1) ... 1429s Setting up libwebp7:amd64 (1.4.0-0.1) ... 1429s Setting up libubsan1:amd64 (14.2.0-7ubuntu1) ... 1429s Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 1429s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... 1429s Setting up libhwasan0:amd64 (14.2.0-7ubuntu1) ... 1429s Setting up libasan8:amd64 (14.2.0-7ubuntu1) ... 1429s Setting up libsuitesparseconfig7:amd64 (1:7.8.0+dfsg-1) ... 1429s Setting up liblua5.4-0:amd64 (5.4.6-3build2) ... 1429s Setting up libharfbuzz0b:amd64 (9.0.0-1) ... 1429s Setting up libthai-data (0.1.29-2build1) ... 1429s Setting up node-bootstrap-sass (3.4.3-2) ... 1429s Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... 1429s Setting up libxss1:amd64 (1:1.2.3-1build3) ... 1429s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... 1429s Setting up pandoc-data (3.1.11.1-3) ... 1429s Setting up libtsan2:amd64 (14.2.0-7ubuntu1) ... 1429s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 1429s Setting up node-normalize.css (8.0.1-5) ... 1429s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 1429s Setting up xdg-utils (1.2.1-0ubuntu1) ... 1429s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 1429s Setting up liblsan0:amd64 (14.2.0-7ubuntu1) ... 1429s Setting up libsz2:amd64 (1.1.3-1) ... 1429s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 1429s Setting up libitm1:amd64 (14.2.0-7ubuntu1) ... 1429s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 1429s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 1429s Setting up libice6:amd64 (2:1.0.10-1build3) ... 1429s Setting up liblapack3:amd64 (3.12.0-3build2) ... 1429s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 1429s Setting up libamd3:amd64 (1:7.8.0+dfsg-1) ... 1429s Setting up libcolamd3:amd64 (1:7.8.0+dfsg-1) ... 1429s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 1429s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 1429s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 1429s Setting up libthai0:amd64 (0.1.29-2build1) ... 1429s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 1429s Setting up pandoc (3.1.11.1+ds-2) ... 1429s Setting up libglpk40:amd64 (5.0-1build2) ... 1429s Setting up libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 1429s Setting up libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ... 1429s Setting up libgcc-14-dev:amd64 (14.2.0-7ubuntu1) ... 1429s Setting up libhdf5-103-1t64:amd64 (1.10.10+repack-4ubuntu3) ... 1429s Setting up libstdc++-14-dev:amd64 (14.2.0-7ubuntu1) ... 1429s Setting up libsm6:amd64 (2:1.2.3-1build3) ... 1429s Setting up libhdf5-hl-100t64:amd64 (1.10.10+repack-4ubuntu3) ... 1429s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 1431s Regenerating fonts cache... done. 1431s Setting up libxft2:amd64 (2.3.6-1build1) ... 1431s Setting up libboost1.83-dev:amd64 (1.83.0-3.2ubuntu2) ... 1431s Setting up libtk8.6:amd64 (8.6.14-1build1) ... 1431s Setting up libpango-1.0-0:amd64 (1.54.0+ds-2) ... 1431s Setting up libcairo2:amd64 (1.18.2-2) ... 1431s Setting up libxt6t64:amd64 (1:1.2.1-1.2build1) ... 1431s Setting up libboost-dev:amd64 (1.83.0.2ubuntu1) ... 1431s Setting up libpangoft2-1.0-0:amd64 (1.54.0+ds-2) ... 1431s Setting up libpangocairo-1.0-0:amd64 (1.54.0+ds-2) ... 1431s Setting up r-base-core (4.4.1-1) ... 1431s 1431s Creating config file /etc/R/Renviron with new version 1432s Setting up r-cran-crayon (1.5.2-1) ... 1432s Setting up r-cran-squarem (2021.1-1) ... 1432s Setting up r-cran-labeling (0.4.3-1) ... 1432s Setting up r-cran-rcppprogress (0.4.2-2build1) ... 1432s Setting up r-cran-sourcetools (0.1.7-1-1) ... 1432s Setting up r-cran-futile.options (1.0.1-3build1) ... 1432s Setting up r-cran-lattice (0.22-6-1) ... 1432s Setting up r-cran-ps (1.7.6-1) ... 1432s Setting up r-cran-nlme (3.1.166-1) ... 1432s Setting up r-cran-farver (2.1.2-1) ... 1432s Setting up r-cran-formatr (1.14-2) ... 1432s Setting up r-cran-pbapply (1.7-2-1) ... 1432s Setting up r-cran-xml (3.99-0.17-1) ... 1432s Setting up r-cran-spatstat.utils (3.0-4-1) ... 1432s Setting up r-cran-viridislite (0.4.2-2) ... 1432s Setting up r-cran-locfit (1.5-9.9-1) ... 1432s Setting up r-cran-cluster (2.1.6-1build1) ... 1432s Setting up r-cran-sparsem (1.84-2-1) ... 1432s Setting up r-cran-statmod (1.5.0-1) ... 1432s Setting up r-cran-nnet (7.3-19-2build1) ... 1432s Setting up r-cran-tensor (1.5-4) ... 1432s Setting up r-cran-lazyeval (0.2.2-1build1) ... 1432s Setting up r-cran-commonmark (1.9.1-1) ... 1432s Setting up r-cran-proxy (0.4-27-1) ... 1432s Setting up r-cran-r6 (2.5.1-1) ... 1432s Setting up r-cran-pkgkitten (0.2.4-1) ... 1432s Setting up r-cran-numderiv (2016.8-1.1-3) ... 1432s Setting up r-cran-magrittr (2.0.3-1) ... 1432s Setting up r-cran-rappdirs (0.3.3-1) ... 1432s Setting up r-bioc-genomeinfodbdata (1.2.12-1) ... 1432s Setting up r-cran-littler (0.3.20-1) ... 1432s Setting up r-cran-bh (1.84.0-1) ... 1432s Setting up r-cran-fs (1.6.4+dfsg-1) ... 1432s Setting up r-cran-rcpp (1.0.13-1) ... 1432s Setting up r-cran-curl (5.2.1+dfsg-1) ... 1432s Setting up r-cran-combinat (0.0-8-7build1) ... 1432s Setting up r-cran-codetools (0.2-20-1) ... 1432s Setting up r-cran-brio (1.1.5-1) ... 1432s Setting up r-cran-diffobj (0.3.5-1) ... 1432s Setting up r-bioc-biocgenerics (0.50.0-2) ... 1432s Setting up r-cran-rlang (1.1.4-1) ... 1432s Setting up r-cran-matrixstats (1.3.0-1) ... 1432s Setting up r-cran-listenv (0.9.1+dfsg-1) ... 1432s Setting up littler (0.3.20-1) ... 1432s Setting up r-bioc-matrixgenerics (1.16.0-2) ... 1432s Setting up r-cran-xfun (0.45+dfsg-1) ... 1432s Setting up r-cran-vgam (1.1-9-1) ... 1432s Setting up r-cran-rcpphnsw (0.5.0+ds-1) ... 1432s Setting up r-cran-sys (3.4.2-1) ... 1432s Setting up r-cran-deoptimr (1.1-3-1) ... 1432s Setting up r-cran-withr (3.0.0+dfsg-1) ... 1432s Setting up r-cran-mathjaxr (1.6-0-1) ... 1432s Setting up r-cran-processx (3.8.4-1) ... 1432s Setting up r-cran-slam (0.1-52-1) ... 1432s Setting up r-cran-mime (0.12-2) ... 1432s Setting up r-cran-praise (1.0.0-4build1) ... 1432s Setting up r-cran-vipor (0.4.7-1) ... 1432s Setting up r-cran-generics (0.1.3-1) ... 1432s Setting up r-cran-base64enc (0.1-3-3) ... 1432s Setting up r-cran-beeswarm (0.4.0-1) ... 1432s Setting up r-cran-iterators (1.0.14-1) ... 1432s Setting up r-cran-abind (1.4-5-2) ... 1432s Setting up r-cran-digest (0.6.36-1) ... 1432s Setting up r-cran-ape (5.8-1) ... 1432s Setting up r-cran-yaml (2.3.8-2) ... 1432s Setting up r-cran-ica (1.0-3-1) ... 1432s Setting up r-cran-lambda.r (1.2.4-2build1) ... 1432s Setting up r-cran-rann (2.6.1-1build2) ... 1432s Setting up r-cran-gower (1.0.1-1) ... 1432s Setting up r-cran-evaluate (0.24.0-1) ... 1432s Setting up r-cran-timedate (4032.109-1) ... 1432s Setting up r-cran-highr (0.11+dfsg-1) ... 1432s Setting up r-cran-foreach (1.5.2-1) ... 1432s Setting up r-cran-fansi (1.0.5-1) ... 1432s Setting up r-cran-fastica (1.2-4-1) ... 1432s Setting up r-cran-mass (7.3-61-1) ... 1432s Setting up r-cran-cairo (1.6-2-1) ... 1432s Setting up r-cran-snow (1:0.4.4-2) ... 1432s Setting up r-cran-gtools (3.9.5-1) ... 1432s Setting up r-cran-kernlab (0.9-33-1) ... 1432s Setting up r-cran-data.table (1.15.4+dfsg-2.2) ... 1432s Setting up r-cran-glue (1.7.0-1) ... 1432s Setting up r-cran-bit (4.0.5-1) ... 1432s Setting up r-cran-xtable (1:1.8-4-2) ... 1432s Setting up r-cran-polyclip (1.10-6-1) ... 1432s Setting up r-cran-cli (3.6.2-1) ... 1432s Setting up r-cran-rbibutils (2.2.16-1) ... 1432s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 1432s Setting up r-cran-dotcall64 (1.1-1-1) ... 1432s Setting up r-cran-bitops (1.0-7-1) ... 1432s Setting up r-cran-rprojroot (2.0.4-1) ... 1432s Setting up r-cran-fnn (1.1.4-1) ... 1432s Setting up r-cran-bit64 (4.0.5-1) ... 1432s Setting up r-cran-biocmanager (1.30.22+dfsg-2) ... 1432s Setting up r-cran-progressr (0.14.0-1) ... 1432s Setting up r-bioc-zlibbioc (1.50.0+dfsg-2) ... 1432s Setting up r-cran-deldir (2.0-4-1build1) ... 1432s Setting up r-cran-goftest (1.2-3-1) ... 1432s Setting up r-cran-shape (1.4.6-1) ... 1432s Setting up r-cran-askpass (1.2.0-1) ... 1432s Setting up r-cran-fastmap (1.1.1-1) ... 1432s Setting up r-cran-png (0.1-8-1build2) ... 1432s Setting up r-cran-r.methodss3 (1.8.2-1) ... 1432s Setting up r-bioc-biobase (2.64.0-4) ... 1432s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 1432s Setting up r-cran-mnormt (2.1.1-2) ... 1432s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 1432s Setting up r-cran-sp (1:2.1-2+dfsg-1) ... 1432s Setting up r-cran-utf8 (1.2.4-1) ... 1432s Setting up r-cran-colorspace (2.1-0+dfsg-1) ... 1432s Setting up r-cran-parallelly (1.37.1-1build1) ... 1432s Setting up r-cran-stringi (1.8.3-1) ... 1432s Setting up r-cran-plotrix (3.8-4-1) ... 1432s Setting up r-cran-cpp11 (0.4.7-1) ... 1432s Setting up r-cran-mvtnorm (1.2-5-1) ... 1432s Setting up r-cran-sitmo (2.0.2-1) ... 1432s Setting up r-cran-segmented (2.1-0-1) ... 1432s Setting up r-cran-plyr (1.8.9-1) ... 1432s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 1432s Setting up r-bioc-s4vectors (0.42.1+dfsg-2) ... 1432s Setting up r-cran-isoband (0.2.7-1) ... 1432s Setting up r-cran-runit (0.4.33-1) ... 1432s Setting up r-cran-futile.logger (1.4.3-4build1) ... 1432s Setting up r-cran-diagram (1.6.5-2) ... 1432s Setting up r-bioc-limma (3.60.4+dfsg-1) ... 1432s Setting up r-cran-gtable (0.3.5+dfsg-1) ... 1432s Setting up r-cran-zoo (1.8-12-2) ... 1432s Setting up r-cran-later (1.3.2+dfsg-1) ... 1432s Setting up r-cran-matrix (1.7-0-3) ... 1432s Setting up r-cran-spatstat.sparse (3.0-3-1) ... 1432s Setting up r-cran-here (1.0.1-2) ... 1432s Setting up r-cran-htmltools (0.5.8.1-1) ... 1432s Setting up r-cran-tinytex (0.51-1) ... 1432s Setting up r-cran-irlba (2.3.5.1-4) ... 1432s Setting up r-cran-kernsmooth (2.23-24-1) ... 1432s Setting up r-cran-knitr (1.47+dfsg-1) ... 1432s Setting up r-cran-rcpptoml (0.2.2+dfsg-1) ... 1432s Setting up r-cran-mgcv (1.9-1-1) ... 1432s Setting up r-cran-robustbase (0.99-3-1) ... 1432s Setting up r-cran-cachem (1.0.8-1) ... 1432s Setting up r-cran-lmtest (0.9.40-1) ... 1432s Setting up r-cran-sass (0.4.9+dfsg-1) ... 1432s Setting up r-cran-catools (1.18.2-1) ... 1432s Setting up r-cran-rtsne (0.17-1) ... 1432s Setting up r-cran-rcpparmadillo (14.0.0-1-1) ... 1432s Setting up r-cran-hdf5r (1.3.9+dfsg-1build2) ... 1432s Setting up r-bioc-iranges (2.38.1-1) ... 1432s Setting up r-cran-dqrng (0.3.2+dfsg-1) ... 1432s Setting up r-cran-rjson (0.2.21-1) ... 1432s Setting up r-cran-tzdb (0.4.0-2) ... 1432s Setting up r-cran-reticulate (1.35.0+dfsg-1) ... 1432s Setting up r-cran-globals (0.16.3-1) ... 1432s Setting up r-cran-rcurl (1.98-1.14+dfsg-1build2) ... 1432s Setting up r-cran-spam (2.10-0-1) ... 1432s Setting up r-cran-restfulr (0.0.15-1) ... 1432s Setting up r-cran-gdata (3.0.1-1) ... 1432s Setting up r-cran-vctrs (0.6.5-1) ... 1432s Setting up r-cran-rcppeigen (0.3.4.0.0-1build1) ... 1432s Setting up r-bioc-graph (1.82.0-1) ... 1432s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 1432s Setting up r-cran-ellipsis (0.3.2-2) ... 1432s Setting up r-cran-rcppannoy (0.0.22-1) ... 1432s Setting up r-bioc-rbgl (1.80.0+dfsg-1) ... 1432s Setting up r-cran-openssl (2.2.0+dfsg-1) ... 1432s Setting up r-bioc-biocviews (1.72.0-1) ... 1432s Setting up r-bioc-hsmmsinglecell (1.24.0-1) ... 1432s Setting up r-bioc-s4arrays (1.4.1+dfsg-1) ... 1432s Setting up r-cran-stringr (1.5.1-1) ... 1432s Setting up r-cran-class (7.3-22-2build1) ... 1432s Setting up r-bioc-biocparallel (1.38.0-2) ... 1432s Setting up r-cran-modelmetrics (1.2.2.2-1build1) ... 1432s Setting up r-cran-callr (3.7.6-1) ... 1432s Setting up r-cran-matrixmodels (0.5-3-1) ... 1432s Setting up r-bioc-rhtslib (3.0.0+dfsg-1) ... 1432s Setting up r-cran-desc (1.4.3-1) ... 1432s Setting up r-cran-munsell (0.5.1-1) ... 1432s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 1432s Setting up r-cran-clock (0.7.0-1.1) ... 1432s Setting up r-cran-sandwich (3.1-0-1) ... 1432s Setting up r-cran-proc (1.18.5-1) ... 1432s Setting up r-cran-fontawesome (0.5.2-1) ... 1432s Setting up r-cran-survival (3.7-0-1) ... 1432s Setting up r-cran-igraph (2.0.3-1) ... 1432s Setting up r-bioc-biocio (1.14.0+dfsg-1) ... 1432s Setting up r-cran-r.oo (1.26.0-1) ... 1432s Setting up r-cran-rdpack (2.6-1) ... 1432s Setting up r-cran-future (1.33.1+dfsg-1) ... 1432s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 1432s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... 1432s Setting up r-cran-leidenbase (0.1.27-1) ... 1432s Setting up r-cran-reshape2 (1.4.4-2build1) ... 1432s Setting up r-cran-rsvd (1.0.5-1) ... 1432s Setting up r-cran-future.apply (1.11.2+dfsg-1) ... 1432s Setting up r-cran-systemfonts (1.1.0-1) ... 1432s Setting up r-cran-timechange (0.3.0-1) ... 1432s Setting up r-cran-th.data (1.1-2-2) ... 1432s Setting up r-cran-httr (1.4.7+dfsg-1) ... 1432s Setting up r-cran-gridextra (2.3-3build1) ... 1432s Setting up r-cran-ddrtree (0.1.5-2) ... 1432s Setting up r-cran-scales (1.3.0-1) ... 1432s Setting up r-cran-memoise (2.0.1-1) ... 1432s Setting up r-cran-lava (1.7.3+dfsg-1) ... 1432s Setting up r-cran-promises (1.3.0+dfsg-1) ... 1432s Setting up r-cran-purrr (1.0.2-1) ... 1432s Setting up r-cran-e1071 (1.7-14-1) ... 1432s Setting up r-cran-spatstat.data (3.0-4-1) ... 1432s Setting up r-cran-fastdummies (1.7.3-2) ... 1432s Setting up r-cran-multcomp (1.4-26-2) ... 1432s Setting up r-cran-qqconf (1.3.2+dfsg-1) ... 1432s Setting up r-cran-seuratobject (5.0.2-1) ... 1432s Setting up r-cran-spatstat.geom (3.2-9-2) ... 1432s Setting up r-bioc-xvector (0.44.0-1) ... 1432s Setting up r-cran-pkgbuild (1.4.4-1) ... 1432s Setting up r-cran-hardhat (1.4.0+dfsg-1) ... 1432s Setting up r-cran-dplyr (1.1.4-1) ... 1432s Setting up r-cran-rspectra (0.16-1-1) ... 1432s Setting up r-cran-gplots (3.2.0-1) ... 1432s Setting up r-cran-uwot (0.1.16-2) ... 1432s Setting up r-cran-leiden (0.4.3.1+dfsg-1) ... 1432s Setting up r-bioc-multtest (2.60.0-1) ... 1432s Setting up r-cran-pheatmap (1.0.12-2build1) ... 1432s Setting up r-cran-lubridate (1.9.3+dfsg-1) ... 1432s Setting up r-cran-pkgload (1.4.0-1) ... 1432s Setting up r-cran-r.utils (2.12.3-1) ... 1432s Setting up r-cran-rocr (1.0-11-3) ... 1432s Setting up r-cran-prodlim (2024.06.25-1) ... 1432s Setting up r-cran-fitdistrplus (1.1-11-1) ... 1432s Setting up r-bioc-ucsc.utils (1.0.0+ds-2) ... 1432s Setting up r-bioc-sparsearray (1.4.8+dfsg-1) ... 1432s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 1432s Setting up r-cran-scattermore (1.2-1) ... 1432s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 1432s Setting up r-cran-rematch2 (2.1.2-2build1) ... 1432s Setting up r-cran-rpart (4.1.23-1build1) ... 1432s Setting up r-cran-spatstat.random (3.2-3-1) ... 1432s Setting up r-cran-textshaping (0.3.7-2) ... 1432s Setting up r-cran-ipred (0.9-14-1) ... 1432s Setting up r-cran-viridis (0.6.5-1) ... 1432s Setting up r-bioc-genomeinfodb (1.40.1+dfsg-1) ... 1432s Setting up r-cran-bslib (0.7.0+dfsg-1) ... 1432s Setting up r-cran-ragg (1.3.2-1) ... 1432s Setting up r-cran-spatstat.explore (3.2-7-1) ... 1432s Setting up r-cran-waldo (0.5.2-1build1) ... 1432s Setting up r-cran-ggrepel (0.9.5-2) ... 1432s Setting up r-cran-tidyr (1.3.1-1) ... 1432s Setting up r-cran-recipes (1.0.10+dfsg-2) ... 1432s Setting up r-cran-mutoss (0.1-13-1) ... 1432s Setting up r-cran-ggridges (0.5.6-1) ... 1432s Setting up r-cran-ggbeeswarm (0.7.2-1) ... 1432s Setting up r-bioc-delayedarray (0.30.1+dfsg-1) ... 1432s Setting up r-cran-cowplot (1.1.3+dfsg-1) ... 1432s Setting up r-cran-sctransform (0.4.1-1) ... 1432s Setting up r-cran-patchwork (1.2.0-1) ... 1432s Setting up r-bioc-genomicranges (1.56.1+dfsg-1) ... 1432s Setting up r-bioc-biostrings (2.72.1+dfsg-1) ... 1432s Setting up r-cran-caret (6.0-94+dfsg-1) ... 1432s Setting up r-cran-shiny (1.8.1.1+dfsg-1) ... 1432s Setting up r-bioc-monocle (2.32.0-1) ... 1432s Setting up r-cran-shinyjs (2.1.0-1) ... 1432s Setting up r-cran-testthat (3.2.1.1-1) ... 1432s Setting up r-cran-miniui (0.1.1.1-3build1) ... 1432s Setting up r-cran-ggrastr (1.0.2-1) ... 1432s Setting up r-cran-rmarkdown (2.27+dfsg-1) ... 1432s Setting up r-cran-conquer (1.3.3-1) ... 1432s Setting up r-bioc-rsamtools (2.20.0+dfsg-1) ... 1432s Setting up r-cran-crosstalk (1.2.1+dfsg-1) ... 1432s Setting up r-bioc-summarizedexperiment (1.34.0+dfsg-1) ... 1432s Setting up r-cran-quantreg (5.98-1) ... 1432s Setting up r-cran-sn (2.1.1-2) ... 1432s Setting up r-bioc-deseq2 (1.44.0+dfsg-1) ... 1432s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 1432s Setting up r-cran-colourpicker (1.3.0+dfsg-1) ... 1432s Setting up r-cran-tfisher (0.2.0-3) ... 1432s Setting up r-bioc-genomicalignments (1.40.0-1) ... 1432s Setting up r-cran-metap (1.9-1) ... 1432s Setting up r-bioc-rtracklayer (1.64.0-1) ... 1432s Setting up r-bioc-singlecellexperiment (1.26.0+ds-1) ... 1432s Setting up r-cran-plotly (4.10.4+dfsg-2) ... 1432s Setting up r-cran-mixtools (2.0.0-1) ... 1432s Setting up r-cran-seurat (5.1.0-1) ... 1432s Setting up autopkgtest-satdep (0) ... 1432s Processing triggers for man-db (2.12.1-3) ... 1433s Processing triggers for install-info (7.1.1-1) ... 1433s Processing triggers for libc-bin (2.40-1ubuntu3) ... 1443s (Reading database ... 126040 files and directories currently installed.) 1443s Removing autopkgtest-satdep (0) ... 1443s autopkgtest [16:09:55]: test run-unit-test: [----------------------- 1443s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 1443s BEGIN TEST testthat.R 1443s 1443s R version 4.4.1 (2024-06-14) -- "Race for Your Life" 1443s Copyright (C) 2024 The R Foundation for Statistical Computing 1443s Platform: x86_64-pc-linux-gnu 1443s 1443s R is free software and comes with ABSOLUTELY NO WARRANTY. 1443s You are welcome to redistribute it under certain conditions. 1443s Type 'license()' or 'licence()' for distribution details. 1443s 1443s R is a collaborative project with many contributors. 1443s Type 'contributors()' for more information and 1443s 'citation()' on how to cite R or R packages in publications. 1443s 1443s Type 'demo()' for some demos, 'help()' for on-line help, or 1443s 'help.start()' for an HTML browser interface to help. 1443s Type 'q()' to quit R. 1443s 1443s > library(testthat) 1444s > library(Seurat) 1444s Loading required package: SeuratObject 1444s Loading required package: sp 1445s 1445s Attaching package: ‘SeuratObject’ 1445s 1445s The following objects are masked from ‘package:base’: 1445s 1445s intersect, t 1445s 1447s > # 1447s > # # Run tests for 'v3' 1447s > # message('Run tests for v3 assay') 1447s > # options(Seurat.object.assay.version = 'v3') 1447s > # test_check("Seurat") 1447s > 1447s > # Run tests for 'v5' 1447s > message('Run tests for v5 assay') 1447s > options(Seurat.object.assay.version = 'v5') 1447s > test_check("Seurat") 1447s Run tests for v5 assay 1448s | | | 0% | |======================================================================| 100% 1488s Performing log-normalization 1488s 0% 10 20 30 40 50 60 70 80 90 100% 1488s [----|----|----|----|----|----|----|----|----|----| 1488s **************************************************| 1488s Performing log-normalization 1488s 0% 10 20 30 40 50 60 70 80 90 100% 1488s [----|----|----|----|----|----|----|----|----|----| 1488s **************************************************| 1489s Performing log-normalization 1489s 0% 10 20 30 40 50 60 70 80 90 100% 1489s [----|----|----|----|----|----|----|----|----|----| 1489s **************************************************| 1496s | | | 0% | |======================================================================| 100% 1498s | | | 0% | |======================================================================| 100% 1498s | | | 0% | |======================================================================| 100% 1522s Performing log-normalization 1522s 0% 10 20 30 40 50 60 70 80 90 100% 1522s [----|----|----|----|----|----|----|----|----|----| 1522s **************************************************| 1523s Calculating gene variances 1523s 0% 10 20 30 40 50 60 70 80 90 100% 1523s [----|----|----|----|----|----|----|----|----|----| 1523s **************************************************| 1523s Calculating feature variances of standardized and clipped values 1523s 0% 10 20 30 40 50 60 70 80 90 100% 1523s [----|----|----|----|----|----|----|----|----|----| 1523s **************************************************| 1523s | | | 0% | |======================================================================| 100% 1523s Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck 1523s 1523s Number of nodes: 80 1523s Number of edges: 2045 1523s 1523s Running Louvain algorithm... 1523s 0% 10 20 30 40 50 60 70 80 90 100% 1523s [----|----|----|----|----|----|----|----|----|----| 1523s *********************************************Maximum modularity in 10 random starts: -0.0613 1523s Number of communities: 64 1523s *****| 1523s Elapsed time: 0 seconds 1523s Performing log-normalization 1523s 0% 10 20 30 40 50 60 70 80 90 100% 1523s [----|----|----|----|----|----|----|----|----|----| 1523s **************************************************| 1523s | | | 0% | |======================================================================| 100% 1524s | | | 0% | |======================================================================| 100% 1524s | | | 0% | |======================================================================| 100% 1526s | | | 0% | |======================================================================| 100% 1527s | | | 0% | |======================================================================| 100% 1527s [ FAIL 0 | WARN 210 | SKIP 32 | PASS 661 ] 1527s 1527s ══ Skipped tests (32) ══════════════════════════════════════════════════════════ 1527s • arrow cannot be loaded (1): 'test_load_10X.R:179:3' 1527s • On CRAN (29): 'test_differential_expression.R:307:3', 1527s 'test_differential_expression.R:349:3', 1527s 'test_differential_expression.R:446:3', 'test_dimensional_reduction.R:55:3', 1527s 'test_integratedata.R:111:3', 'test_integration.R:74:3', 1527s 'test_integration.R:105:3', 'test_integration.R:136:3', 1527s 'test_integration.R:170:3', 'test_integration.R:202:3', 1527s 'test_integration.R:234:3', 'test_integration.R:264:3', 1527s 'test_integration.R:306:3', 'test_integration.R:335:3', 1527s 'test_integration.R:365:3', 'test_integration5.R:38:3', 1527s 'test_integration5.R:219:3', 'test_objects.R:6:3', 1527s 'test_preprocessing.R:140:3', 'test_preprocessing.R:158:3', 1527s 'test_preprocessing.R:433:3', 'test_preprocessing.R:554:3', 1527s 'test_read_mtx.R:4:3', 'test_read_mtx.R:18:3', 'test_transferdata.R:65:3', 1527s 'test_transferdata.R:88:3', 'test_transferdata.R:100:3', 1527s 'test_transferdata.R:112:3', 'test_transferdata.R:128:3' 1527s • sf cannot be loaded (2): 'test_spatial.R:115:3', 'test_spatial.R:266:3' 1527s 1527s [ FAIL 0 | WARN 210 | SKIP 32 | PASS 661 ] 1528s > 1528s > 1528s > 1528s autopkgtest [16:11:20]: test run-unit-test: -----------------------] 1528s run-unit-test PASS 1528s autopkgtest [16:11:20]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 1528s autopkgtest [16:11:20]: test pkg-r-autopkgtest: preparing testbed 1582s autopkgtest [16:12:14]: testbed dpkg architecture: amd64 1582s autopkgtest [16:12:14]: testbed apt version: 2.9.8 1582s autopkgtest [16:12:14]: @@@@@@@@@@@@@@@@@@@@ test bed setup 1583s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 1583s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 1583s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [31.2 kB] 1583s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [177 kB] 1583s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [2268 kB] 1583s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [165 kB] 1583s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [238 kB] 1583s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [32.6 kB] 1583s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [1715 kB] 1583s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [833 kB] 1583s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [18.1 kB] 1583s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [58.6 kB] 1583s Fetched 5618 kB in 1s (8954 kB/s) 1584s Reading package lists... 1585s Reading package lists... 1585s Building dependency tree... 1585s Reading state information... 1586s Calculating upgrade... 1586s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1586s Reading package lists... 1586s Building dependency tree... 1586s Reading state information... 1587s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1587s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 1587s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 1587s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 1587s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 1588s Reading package lists... 1589s Reading package lists... 1589s Building dependency tree... 1589s Reading state information... 1589s Calculating upgrade... 1589s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1589s Reading package lists... 1590s Building dependency tree... 1590s Reading state information... 1590s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1592s Reading package lists... 1592s Building dependency tree... 1592s Reading state information... 1592s Starting pkgProblemResolver with broken count: 0 1592s Starting 2 pkgProblemResolver with broken count: 0 1592s Done 1593s The following additional packages will be installed: 1593s build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu 1593s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 1593s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-14 1593s g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 1593s gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-14 1593s gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools 1593s javascript-common libamd3 libasan8 libblas-dev libblas3 libboost-dev 1593s libboost1.83-dev libbz2-dev libcairo2 libcc1-0 libcolamd3 libdatrie1 1593s libdeflate-dev libdeflate0 libfftw3-double3 libfontconfig1 libgcc-14-dev 1593s libgfortran-14-dev libgfortran5 libglpk40 libgomp1 libgraphite2-3 1593s libharfbuzz0b libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 1593s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 1593s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 1593s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 1593s libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js 1593s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 1593s libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 liblerc4 1593s liblsan0 libltdl7 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev 1593s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 1593s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 1593s libpixman-1-0 libpkgconf3 libpng-dev libquadmath0 libreadline-dev 1593s libsharpyuv0 libsm6 libstdc++-14-dev libsuitesparseconfig7 libtcl8.6 1593s libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 1593s libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 1593s littler node-bootstrap-sass node-html5shiv node-normalize.css pandoc 1593s pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 1593s r-bioc-biobase r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 1593s r-bioc-biostrings r-bioc-delayedarray r-bioc-deseq2 r-bioc-genomeinfodb 1593s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicranges 1593s r-bioc-iranges r-bioc-limma r-bioc-matrixgenerics r-bioc-multtest 1593s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 1593s r-bioc-s4vectors r-bioc-sparsearray r-bioc-summarizedexperiment 1593s r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-ape 1593s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-bitops r-cran-brio 1593s r-cran-bslib r-cran-cachem r-cran-callr r-cran-caret r-cran-catools 1593s r-cran-class r-cran-cli r-cran-clock r-cran-cluster r-cran-codetools 1593s r-cran-colorspace r-cran-colourpicker r-cran-commonmark r-cran-conquer 1593s r-cran-cowplot r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl 1593s r-cran-data.table r-cran-deldir r-cran-deoptimr r-cran-desc r-cran-diagram 1593s r-cran-diffobj r-cran-digest r-cran-dotcall64 r-cran-dplyr r-cran-dqrng 1593s r-cran-e1071 r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver 1593s r-cran-fastdummies r-cran-fastmap r-cran-fitdistrplus r-cran-fnn 1593s r-cran-fontawesome r-cran-foreach r-cran-formatr r-cran-fs 1593s r-cran-futile.logger r-cran-futile.options r-cran-future r-cran-future.apply 1593s r-cran-gdata r-cran-generics r-cran-ggplot2 r-cran-ggrepel r-cran-ggridges 1593s r-cran-globals r-cran-glue r-cran-goftest r-cran-gower r-cran-gplots 1593s r-cran-gridextra r-cran-gtable r-cran-gtools r-cran-hardhat r-cran-here 1593s r-cran-highr r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr 1593s r-cran-ica r-cran-igraph r-cran-ipred r-cran-irlba r-cran-isoband 1593s r-cran-iterators r-cran-jquerylib r-cran-jsonlite r-cran-kernlab 1593s r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later 1593s r-cran-lattice r-cran-lava r-cran-lazyeval r-cran-leiden r-cran-lifecycle 1593s r-cran-listenv r-cran-littler r-cran-lmtest r-cran-locfit r-cran-lubridate 1593s r-cran-magrittr r-cran-mass r-cran-mathjaxr r-cran-matrix 1593s r-cran-matrixmodels r-cran-matrixstats r-cran-memoise r-cran-metap 1593s r-cran-mgcv r-cran-mime r-cran-miniui r-cran-mixtools r-cran-mnormt 1593s r-cran-modelmetrics r-cran-multcomp r-cran-munsell r-cran-mutoss 1593s r-cran-mvtnorm r-cran-nlme r-cran-nnet r-cran-numderiv r-cran-openssl 1593s r-cran-parallelly r-cran-patchwork r-cran-pbapply r-cran-pillar 1593s r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload 1593s r-cran-plotly r-cran-plotrix r-cran-plyr r-cran-png r-cran-polyclip 1593s r-cran-praise r-cran-proc r-cran-processx r-cran-prodlim r-cran-progressr 1593s r-cran-promises r-cran-proxy r-cran-ps r-cran-purrr r-cran-qqconf 1593s r-cran-quantreg r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils r-cran-r6 1593s r-cran-rann r-cran-rappdirs r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp 1593s r-cran-rcppannoy r-cran-rcpparmadillo r-cran-rcppeigen r-cran-rcpphnsw 1593s r-cran-rcppprogress r-cran-rcpptoml r-cran-rcurl r-cran-rdpack 1593s r-cran-recipes r-cran-rematch2 r-cran-reshape2 r-cran-restfulr 1593s r-cran-reticulate r-cran-rjson r-cran-rlang r-cran-rmarkdown 1593s r-cran-robustbase r-cran-rocr r-cran-rpart r-cran-rprojroot r-cran-rspectra 1593s r-cran-rsvd r-cran-rtsne r-cran-sandwich r-cran-sass r-cran-scales 1593s r-cran-scattermore r-cran-sctransform r-cran-segmented r-cran-seurat 1593s r-cran-seuratobject r-cran-shape r-cran-shiny r-cran-shinyjs r-cran-sitmo 1593s r-cran-sn r-cran-snow r-cran-sourcetools r-cran-sp r-cran-spam 1593s r-cran-sparsem r-cran-spatstat.data r-cran-spatstat.explore 1593s r-cran-spatstat.geom r-cran-spatstat.random r-cran-spatstat.sparse 1593s r-cran-spatstat.utils r-cran-squarem r-cran-statmod r-cran-stringi 1593s r-cran-stringr r-cran-survival r-cran-sys r-cran-tensor r-cran-testthat 1593s r-cran-tfisher r-cran-th.data r-cran-tibble r-cran-tidyr r-cran-tidyselect 1593s r-cran-timechange r-cran-timedate r-cran-tinytex r-cran-tzdb r-cran-utf8 1593s r-cran-uwot r-cran-vctrs r-cran-vgam r-cran-viridislite r-cran-waldo 1593s r-cran-withr r-cran-xfun r-cran-xml r-cran-xtable r-cran-yaml r-cran-zoo 1593s unzip x11-common xdg-utils zip zlib1g-dev 1593s Suggested packages: 1593s cpp-doc gcc-14-locales cpp-14-doc debtags g++-multilib g++-14-multilib 1593s gcc-14-doc gcc-multilib manpages-dev autoconf automake libtool flex bison 1593s gdb gcc-doc gcc-14-multilib gdb-x86-64-linux-gnu gfortran-multilib 1593s gfortran-doc gfortran-14-multilib gfortran-14-doc libcoarrays-dev apache2 1593s | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 1593s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 1593s libboost-context1.83-dev libboost-contract1.83-dev 1593s libboost-coroutine1.83-dev libboost-date-time1.83-dev 1593s libboost-exception1.83-dev libboost-fiber1.83-dev 1593s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 1593s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 1593s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 1593s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 1593s libboost-numpy1.83-dev libboost-program-options1.83-dev 1593s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 1593s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 1593s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 1593s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 1593s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 1593s libfftw3-bin libfftw3-dev libiodbc2-dev default-libmysqlclient-dev icu-doc 1593s libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix libjs-mathjax-doc 1593s liblzma-doc ncurses-doc readline-doc libstdc++-14-doc tcl8.6 tk8.6 nodejs 1593s texlive-latex-recommended texlive-xetex texlive-luatex pandoc-citeproc 1593s texlive-latex-extra context wkhtmltopdf librsvg2-bin groff ghc php python 1593s ruby libjs-katex citation-style-language-styles elpa-ess r-doc-info 1593s | r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base 1593s texlive-plain-generic texlive-fonts-recommended texlive-fonts-extra 1593s texlive-extra-utils texinfo r-bioc-all r-cran-runit r-bioc-biocstyle 1593s r-bioc-annotationdbi r-bioc-affy r-bioc-annotate r-cran-bbmisc 1593s r-cran-doparallel r-bioc-variantannotation r-bioc-shortread 1593s r-cran-batchtools r-bioc-bsgenome r-bioc-genomicfeatures r-bioc-pwalign 1593s r-bioc-hdf5array r-bioc-genefilter r-cran-lobstr r-bioc-delayedmatrixstats 1593s r-cran-pheatmap r-bioc-tximport r-bioc-tximeta r-bioc-tximportdata 1593s r-cran-readr r-bioc-glmgampoi r-cran-biocmanager r-bioc-edger r-bioc-gviz 1593s r-bioc-annotationhub r-bioc-dexseq r-bioc-keggrest r-cran-biasedurn 1593s r-cran-ellipse r-bioc-go.db r-bioc-org.hs.eg.db r-bioc-sparsematrixstats 1593s r-bioc-graph r-bioc-rhdf5 r-cran-dbi r-cran-rmariadb r-cran-gee r-cran-expm 1593s clustalw muscle phyml t-coffee r-cran-bradleyterry2 r-cran-covr r-cran-gam 1593s r-cran-mlbench r-cran-party r-cran-pls r-cran-randomforest r-cran-slider 1593s r-cran-vcd r-cran-jpeg r-cran-viridis r-cran-rstudioapi r-cran-hmisc 1593s r-cran-bookdown r-cran-tinytest r-cran-uuid r-cran-magick r-cran-sf 1593s r-cran-getopt r-cran-interp r-cran-fdrtool r-bioc-qvalue r-cran-bit64 1593s r-cran-formattable r-cran-nanotime r-cran-palmerpenguins r-cran-units 1593s r-cran-vdiffr r-cran-roxygen2 r-cran-inline r-cran-devtools r-cran-rmpi 1593s r-cran-rlecuyer r-cran-spatstat.model r-cran-spatstat.linnet r-cran-spelling 1593s r-cran-bench r-cran-blob r-cran-hms r-cran-plm 1593s Recommended packages: 1593s bzip2-doc node-jquery libpng-tools r-recommended r-doc-html r-cran-phangorn 1593s r-cran-covr r-cran-thematic r-cran-mockery r-cran-spelling r-cran-earth 1593s r-cran-mda r-cran-mlmetrics r-cran-fastica r-cran-themis r-cran-rstudioapi 1593s r-cran-whoami r-cran-xml2 r-cran-cairo r-cran-forcats r-cran-gridgraphics 1593s r-cran-magick r-cran-maps r-cran-ragg r-cran-vdiffr r-cran-venndiagram 1593s r-cran-bench r-cran-decor r-cran-lobstr r-cran-progress r-cran-webutils 1593s r-cran-bit64 r-cran-bit r-cran-xts r-cran-markdown r-cran-gh 1593s r-cran-rhpcblasctl r-cran-roxygen2 r-cran-broom r-cran-dbi r-cran-dbplyr 1593s r-cran-rmysql r-cran-rpostgresql r-cran-rsqlite libpcg-cpp-dev 1593s r-cran-unitizer r-cran-rgenoud r-cran-actuar r-cran-rsvg r-cran-testit 1593s r-cran-r.rsp r-cran-hexbin r-cran-hmisc r-cran-mapproj r-cran-profvis 1593s r-cran-sf r-cran-svglite r-cran-devtools r-cran-ggbeeswarm r-cran-readr 1593s r-cran-modeldata r-cran-usethis r-cran-jpeg r-bioc-graph r-cran-rgl 1593s r-cran-mlbench r-cran-gridsvg r-cran-tikzdevice r-cran-webshot 1593s node-highlight.js r-cran-ellipse r-cran-fields r-cran-geepack 1593s r-cran-bookdown r-cran-lavasearch2 r-cran-lme4 r-cran-mets r-cran-optimx 1593s r-cran-polycor r-cran-network r-cran-qpdf r-cran-remotes r-cran-lintr 1593s r-cran-tidyverse r-cran-r.devices r-cran-sodium r-cran-ggthemes 1593s r-cran-ggally r-cran-ggalluvial r-cran-dendextend r-cran-irdisplay 1593s r-cran-palmerpenguins r-cran-rversions r-cran-doparallel r-cran-itertools 1593s r-cran-logcondens r-cran-webfakes r-cran-pbmcapply r-cran-furrr r-cran-cba 1593s r-cran-pingr r-cran-distr r-cran-tinytest r-cran-gbrd r-cran-ddalpha 1593s r-cran-dials r-cran-rcpproll r-cran-rsample r-cran-splines2 r-cran-rcppml 1593s r-cran-dimred r-cran-runit r-cran-dygraphs r-cran-rsconnect r-cran-downlit 1593s r-cran-mockr r-cran-dichromat r-cran-hms r-cran-hdf5r 1593s r-bioc-singlecellexperiment r-bioc-monocle r-cran-ggrastr r-cran-dt 1593s r-cran-gstat r-cran-terra r-cran-raster r-cran-truncdist r-cran-sm 1593s r-cran-gsl r-cran-spatial r-cran-spatstat.linnet r-cran-spatstat.model 1593s r-cran-spatstat r-cran-setrng r-cran-formattable r-cran-pkgdown 1593s r-cran-zeallot r-cran-renv libfile-mimeinfo-perl libnet-dbus-perl 1593s libx11-protocol-perl x11-utils x11-xserver-utils 1593s The following NEW packages will be installed: 1593s autopkgtest-satdep build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu 1593s cpp-x86-64-linux-gnu dctrl-tools fontconfig fontconfig-config 1593s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 1593s fonts-glyphicons-halflings fonts-mathjax g++ g++-14 g++-14-x86-64-linux-gnu 1593s g++-x86-64-linux-gnu gcc gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu 1593s gfortran gfortran-14 gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu 1593s icu-devtools javascript-common libamd3 libasan8 libblas-dev libblas3 1593s libboost-dev libboost1.83-dev libbz2-dev libcairo2 libcc1-0 libcolamd3 1593s libdatrie1 libdeflate-dev libdeflate0 libfftw3-double3 libfontconfig1 1593s libgcc-14-dev libgfortran-14-dev libgfortran5 libglpk40 libgomp1 1593s libgraphite2-3 libharfbuzz0b libhwasan0 libice6 libicu-dev libisl23 libitm1 1593s libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 1593s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 1593s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 1593s libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js 1593s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 1593s libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 liblerc4 1593s liblsan0 libltdl7 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev 1593s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 1593s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 1593s libpixman-1-0 libpkgconf3 libpng-dev libquadmath0 libreadline-dev 1593s libsharpyuv0 libsm6 libstdc++-14-dev libsuitesparseconfig7 libtcl8.6 1593s libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 1593s libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 1593s littler node-bootstrap-sass node-html5shiv node-normalize.css pandoc 1593s pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 1593s r-bioc-biobase r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 1593s r-bioc-biostrings r-bioc-delayedarray r-bioc-deseq2 r-bioc-genomeinfodb 1593s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicranges 1593s r-bioc-iranges r-bioc-limma r-bioc-matrixgenerics r-bioc-multtest 1593s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 1593s r-bioc-s4vectors r-bioc-sparsearray r-bioc-summarizedexperiment 1593s r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-ape 1593s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-bitops r-cran-brio 1593s r-cran-bslib r-cran-cachem r-cran-callr r-cran-caret r-cran-catools 1593s r-cran-class r-cran-cli r-cran-clock r-cran-cluster r-cran-codetools 1593s r-cran-colorspace r-cran-colourpicker r-cran-commonmark r-cran-conquer 1593s r-cran-cowplot r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl 1593s r-cran-data.table r-cran-deldir r-cran-deoptimr r-cran-desc r-cran-diagram 1593s r-cran-diffobj r-cran-digest r-cran-dotcall64 r-cran-dplyr r-cran-dqrng 1593s r-cran-e1071 r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver 1593s r-cran-fastdummies r-cran-fastmap r-cran-fitdistrplus r-cran-fnn 1593s r-cran-fontawesome r-cran-foreach r-cran-formatr r-cran-fs 1593s r-cran-futile.logger r-cran-futile.options r-cran-future r-cran-future.apply 1593s r-cran-gdata r-cran-generics r-cran-ggplot2 r-cran-ggrepel r-cran-ggridges 1593s r-cran-globals r-cran-glue r-cran-goftest r-cran-gower r-cran-gplots 1593s r-cran-gridextra r-cran-gtable r-cran-gtools r-cran-hardhat r-cran-here 1593s r-cran-highr r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr 1593s r-cran-ica r-cran-igraph r-cran-ipred r-cran-irlba r-cran-isoband 1593s r-cran-iterators r-cran-jquerylib r-cran-jsonlite r-cran-kernlab 1593s r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later 1593s r-cran-lattice r-cran-lava r-cran-lazyeval r-cran-leiden r-cran-lifecycle 1593s r-cran-listenv r-cran-littler r-cran-lmtest r-cran-locfit r-cran-lubridate 1593s r-cran-magrittr r-cran-mass r-cran-mathjaxr r-cran-matrix 1593s r-cran-matrixmodels r-cran-matrixstats r-cran-memoise r-cran-metap 1593s r-cran-mgcv r-cran-mime r-cran-miniui r-cran-mixtools r-cran-mnormt 1593s r-cran-modelmetrics r-cran-multcomp r-cran-munsell r-cran-mutoss 1593s r-cran-mvtnorm r-cran-nlme r-cran-nnet r-cran-numderiv r-cran-openssl 1593s r-cran-parallelly r-cran-patchwork r-cran-pbapply r-cran-pillar 1593s r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload 1593s r-cran-plotly r-cran-plotrix r-cran-plyr r-cran-png r-cran-polyclip 1593s r-cran-praise r-cran-proc r-cran-processx r-cran-prodlim r-cran-progressr 1593s r-cran-promises r-cran-proxy r-cran-ps r-cran-purrr r-cran-qqconf 1593s r-cran-quantreg r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils r-cran-r6 1593s r-cran-rann r-cran-rappdirs r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp 1593s r-cran-rcppannoy r-cran-rcpparmadillo r-cran-rcppeigen r-cran-rcpphnsw 1593s r-cran-rcppprogress r-cran-rcpptoml r-cran-rcurl r-cran-rdpack 1593s r-cran-recipes r-cran-rematch2 r-cran-reshape2 r-cran-restfulr 1593s r-cran-reticulate r-cran-rjson r-cran-rlang r-cran-rmarkdown 1593s r-cran-robustbase r-cran-rocr r-cran-rpart r-cran-rprojroot r-cran-rspectra 1593s r-cran-rsvd r-cran-rtsne r-cran-sandwich r-cran-sass r-cran-scales 1593s r-cran-scattermore r-cran-sctransform r-cran-segmented r-cran-seurat 1593s r-cran-seuratobject r-cran-shape r-cran-shiny r-cran-shinyjs r-cran-sitmo 1593s r-cran-sn r-cran-snow r-cran-sourcetools r-cran-sp r-cran-spam 1593s r-cran-sparsem r-cran-spatstat.data r-cran-spatstat.explore 1593s r-cran-spatstat.geom r-cran-spatstat.random r-cran-spatstat.sparse 1593s r-cran-spatstat.utils r-cran-squarem r-cran-statmod r-cran-stringi 1593s r-cran-stringr r-cran-survival r-cran-sys r-cran-tensor r-cran-testthat 1593s r-cran-tfisher r-cran-th.data r-cran-tibble r-cran-tidyr r-cran-tidyselect 1593s r-cran-timechange r-cran-timedate r-cran-tinytex r-cran-tzdb r-cran-utf8 1593s r-cran-uwot r-cran-vctrs r-cran-vgam r-cran-viridislite r-cran-waldo 1593s r-cran-withr r-cran-xfun r-cran-xml r-cran-xtable r-cran-yaml r-cran-zoo 1593s unzip x11-common xdg-utils zip zlib1g-dev 1593s 0 upgraded, 389 newly installed, 0 to remove and 0 not upgraded. 1593s Need to get 447 MB/447 MB of archives. 1593s After this operation, 1299 MB of additional disk space will be used. 1593s Get:1 /tmp/autopkgtest.4heZiw/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [856 B] 1593s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 1593s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 1593s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-7ubuntu1 [11.9 MB] 1593s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-7ubuntu1 [1026 B] 1593s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [5452 B] 1593s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.1.0-2ubuntu1 [22.4 kB] 1593s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 14.2.0-7ubuntu1 [47.6 kB] 1593s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-7ubuntu1 [148 kB] 1593s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 14.2.0-7ubuntu1 [29.1 kB] 1593s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 14.2.0-7ubuntu1 [2998 kB] 1593s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 14.2.0-7ubuntu1 [1316 kB] 1593s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 14.2.0-7ubuntu1 [2733 kB] 1593s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 14.2.0-7ubuntu1 [1177 kB] 1594s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 14.2.0-7ubuntu1 [1634 kB] 1594s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 14.2.0-7ubuntu1 [153 kB] 1594s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-7ubuntu1 [2814 kB] 1594s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-7ubuntu1 [23.4 MB] 1594s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-7ubuntu1 [526 kB] 1594s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1214 B] 1594s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.1.0-2ubuntu1 [5000 B] 1594s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-7ubuntu1 [2503 kB] 1594s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-7ubuntu1 [13.4 MB] 1594s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-7ubuntu1 [19.8 kB] 1594s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [966 B] 1594s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.1.0-2ubuntu1 [1100 B] 1594s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 1594s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 dctrl-tools amd64 2.24-3build3 [106 kB] 1594s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 1594s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 1594s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB] 1594s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB] 1594s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB] 1594s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 1594s Get:35 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 1594s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 1594s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-7ubuntu1 [909 kB] 1594s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran-14-dev amd64 14.2.0-7ubuntu1 [965 kB] 1594s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-7ubuntu1 [12.6 MB] 1594s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14 amd64 14.2.0-7ubuntu1 [11.6 kB] 1594s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1022 B] 1594s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran amd64 4:14.1.0-2ubuntu1 [1172 B] 1594s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 icu-devtools amd64 74.2-1ubuntu4 [213 kB] 1594s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 11+nmu1 [5936 B] 1594s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libsuitesparseconfig7 amd64 1:7.8.0+dfsg-1 [13.1 kB] 1594s Get:46 http://ftpmaster.internal/ubuntu plucky/universe amd64 libamd3 amd64 1:7.8.0+dfsg-1 [27.2 kB] 1594s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-3build2 [247 kB] 1594s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas-dev amd64 3.12.0-3build2 [172 kB] 1594s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost1.83-dev amd64 1.83.0-3.2ubuntu2 [10.7 MB] 1594s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost-dev amd64 1.83.0.2ubuntu1 [4468 B] 1594s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libbz2-dev amd64 1.0.8-6 [33.8 kB] 1594s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.42.2-1build1 [279 kB] 1594s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 1594s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 1594s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 1594s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 1594s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libcolamd3 amd64 1:7.8.0+dfsg-1 [19.1 kB] 1594s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 1594s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.21-1 [49.8 kB] 1594s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate-dev amd64 1.21-1 [56.9 kB] 1594s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libfftw3-double3 amd64 3.3.10-1ubuntu4 [839 kB] 1594s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl7 amd64 2.4.7-7build1 [40.3 kB] 1594s Get:63 http://ftpmaster.internal/ubuntu plucky/universe amd64 libglpk40 amd64 5.0-1build2 [369 kB] 1594s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 1594s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 9.0.0-1 [487 kB] 1594s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 1594s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.0.10-1build3 [41.4 kB] 1594s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libicu-dev amd64 74.2-1ubuntu4 [11.9 MB] 1594s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-2ubuntu2 [150 kB] 1594s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8-dev amd64 2.1.5-2ubuntu2 [295 kB] 1594s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 1594s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 1594s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 1594s Get:74 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 1594s Get:75 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 1594s Get:76 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 1594s Get:77 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 1594s Get:78 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 1594s Get:79 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 1594s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 1594s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 1594s Get:82 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 1594s Get:83 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 1594s Get:84 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 1594s Get:85 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 1594s Get:86 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 1594s Get:87 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 1594s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-3build2 [2668 kB] 1594s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack-dev amd64 3.12.0-3build2 [5249 kB] 1594s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-4ubuntu2 [179 kB] 1594s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 liblua5.4-0 amd64 5.4.6-3build2 [166 kB] 1594s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses-dev amd64 6.5-2 [384 kB] 1594s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 1594s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 1594s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.54.0+ds-2 [235 kB] 1594s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.54.0+ds-2 [49.1 kB] 1594s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.54.0+ds-2 [28.8 kB] 1594s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper1 amd64 1.1.29build1 [13.4 kB] 1594s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 1.1.29build1 [8650 B] 1594s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.42-4ubuntu3 [214 kB] 1594s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-32-0 amd64 10.42-4ubuntu3 [201 kB] 1594s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-posix3 amd64 10.42-4ubuntu3 [6768 B] 1594s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-dev amd64 10.42-4ubuntu3 [747 kB] 1594s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libpkgconf3 amd64 1.8.1-3ubuntu1 [31.0 kB] 1594s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 1594s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libpng-dev amd64 1.6.44-1 [266 kB] 1594s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libreadline-dev amd64 8.2-5 [169 kB] 1594s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [17.5 kB] 1594s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.3-1build3 [15.7 kB] 1594s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.14+dfsg-1build1 [988 kB] 1594s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 1594s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.4.0-0.1 [231 kB] 1594s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 1594s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 1594s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 1594s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.14-1build1 [779 kB] 1594s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 1594s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14 [174 kB] 1594s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 1594s Get:120 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 1594s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.1-1 [28.5 MB] 1595s Get:122 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-1 [96.0 kB] 1595s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-1 [2486 B] 1595s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 1595s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 1595s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 1595s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc-data all 3.1.11.1-3 [78.7 kB] 1595s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc amd64 3.1.11.1+ds-2 [27.2 MB] 1595s Get:129 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma-dev amd64 5.6.2-2 [176 kB] 1595s Get:130 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf-bin amd64 1.8.1-3ubuntu1 [21.2 kB] 1595s Get:131 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf amd64 1.8.1-3ubuntu1 [16.8 kB] 1595s Get:132 http://ftpmaster.internal/ubuntu plucky/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3 [193 kB] 1595s Get:133 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-dev all 4.4.1-1 [4338 B] 1595s Get:134 http://ftpmaster.internal/ubuntu plucky/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 1595s Get:135 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocgenerics all 0.50.0-2 [605 kB] 1595s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biobase amd64 2.64.0-4 [2154 kB] 1595s Get:137 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-s4vectors amd64 0.42.1+dfsg-2 [1890 kB] 1595s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocio all 1.14.0+dfsg-1 [215 kB] 1595s Get:139 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-formatr all 1.14-2 [152 kB] 1595s Get:140 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 1595s Get:141 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 1595s Get:142 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 1595s Get:143 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 1595s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-codetools all 0.2-20-1 [90.5 kB] 1595s Get:145 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bh all 1.84.0-1 [5962 B] 1595s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cpp11 all 0.4.7-1 [266 kB] 1595s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocparallel amd64 1.38.0-2 [1342 kB] 1595s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-iranges amd64 2.38.1-1 [2298 kB] 1595s Get:149 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-zlibbioc all 1.50.0+dfsg-2 [10.1 kB] 1595s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-xvector amd64 0.44.0-1 [624 kB] 1595s Get:151 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-curl amd64 5.2.1+dfsg-1 [180 kB] 1595s Get:152 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.8.8+dfsg-1 [441 kB] 1595s Get:153 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 1595s Get:154 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sys amd64 3.4.2-1 [44.6 kB] 1595s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-askpass amd64 1.2.0-1 [24.6 kB] 1595s Get:156 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-openssl amd64 2.2.0+dfsg-1 [405 kB] 1595s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB] 1595s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 1595s Get:159 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-ucsc.utils all 1.0.0+ds-2 [77.0 kB] 1595s Get:160 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodbdata all 1.2.12-1 [12.6 MB] 1595s Get:161 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodb all 1.40.1+dfsg-1 [3883 kB] 1595s Get:162 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.2-1 [164 kB] 1595s Get:163 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biostrings amd64 2.72.1+dfsg-1 [13.2 MB] 1595s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 1595s Get:165 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrix amd64 1.7-0-3 [4185 kB] 1595s Get:166 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixstats amd64 1.3.0-1 [505 kB] 1595s Get:167 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-matrixgenerics all 1.16.0-2 [424 kB] 1595s Get:168 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-abind all 1.4-5-2 [63.6 kB] 1595s Get:169 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-s4arrays amd64 1.4.1+dfsg-1 [525 kB] 1595s Get:170 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-sparsearray amd64 1.4.8+dfsg-1 [1254 kB] 1595s Get:171 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-delayedarray amd64 0.30.1+dfsg-1 [1846 kB] 1595s Get:172 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomicranges amd64 1.56.1+dfsg-1 [1840 kB] 1595s Get:173 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-summarizedexperiment all 1.34.0+dfsg-1 [1134 kB] 1595s Get:174 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-locfit amd64 1.5-9.9-1 [518 kB] 1595s Get:175 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.2-1 [1380 kB] 1595s Get:176 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.7.0-1 [154 kB] 1595s Get:177 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.4-1 [1708 kB] 1595s Get:178 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 1595s Get:179 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtable all 0.3.5+dfsg-1 [192 kB] 1595s Get:180 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 1595s Get:181 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mass amd64 7.3-61-1 [1109 kB] 1596s Get:182 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nlme amd64 3.1.166-1 [2314 kB] 1596s Get:183 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB] 1596s Get:184 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB] 1596s Get:185 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 1596s Get:186 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colorspace amd64 2.1-0+dfsg-1 [1541 kB] 1596s Get:187 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-munsell all 0.5.1-1 [213 kB] 1596s Get:188 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 1596s Get:189 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridislite all 0.4.2-2 [1088 kB] 1596s Get:190 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scales all 1.3.0-1 [603 kB] 1596s Get:191 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 1596s Get:192 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 1596s Get:193 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 1596s Get:194 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 1596s Get:195 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 1596s Get:196 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 1596s Get:197 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-2 [415 kB] 1596s Get:198 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.0+dfsg-1 [228 kB] 1596s Get:199 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 1596s Get:200 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 1596s Get:201 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.13-1 [1990 kB] 1596s Get:202 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpparmadillo amd64 14.0.0-1-1 [866 kB] 1596s Get:203 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-deseq2 amd64 1.44.0+dfsg-1 [1236 kB] 1596s Get:204 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bitops amd64 1.0-7-1 [29.8 kB] 1596s Get:205 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rhtslib amd64 3.0.0+dfsg-1 [1413 kB] 1596s Get:206 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rsamtools amd64 2.20.0+dfsg-1 [3684 kB] 1596s Get:207 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomicalignments amd64 1.40.0-1 [2149 kB] 1596s Get:208 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-statmod amd64 1.5.0-1 [295 kB] 1596s Get:209 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-limma amd64 3.60.4+dfsg-1 [1955 kB] 1596s Get:210 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-survival amd64 3.7-0-1 [6271 kB] 1596s Get:211 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-multtest amd64 2.60.0-1 [843 kB] 1596s Get:212 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xml amd64 3.99-0.17-1 [1745 kB] 1596s Get:213 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcurl amd64 1.98-1.14+dfsg-1build2 [793 kB] 1596s Get:214 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rjson amd64 0.2.21-1 [143 kB] 1596s Get:215 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.8-2 [108 kB] 1596s Get:216 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-restfulr amd64 0.0.15-1 [380 kB] 1596s Get:217 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rtracklayer amd64 1.64.0-1 [5074 kB] 1596s Get:218 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.36-1 [199 kB] 1596s Get:219 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ape amd64 5.8-1 [2923 kB] 1596s Get:220 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 1596s Get:221 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 1596s Get:222 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.1.1-1 [70.5 kB] 1596s Get:223 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.0.8-1 [72.1 kB] 1596s Get:224 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 1596s Get:225 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 1596s Get:226 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 1596s Get:227 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.4+dfsg-1 [245 kB] 1596s Get:228 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 1596s Get:229 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 1596s Get:230 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.7.0+dfsg-1 [4255 kB] 1596s Get:231 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ps amd64 1.7.6-1 [313 kB] 1596s Get:232 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-processx amd64 3.8.4-1 [353 kB] 1596s Get:233 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 1596s Get:234 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-class amd64 7.3-22-2build1 [88.2 kB] 1596s Get:235 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB] 1596s Get:236 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-e1071 amd64 1.7-14-1 [558 kB] 1596s Get:237 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-iterators all 1.0.14-1 [336 kB] 1596s Get:238 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-foreach all 1.5.2-1 [124 kB] 1596s Get:239 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-data.table amd64 1.15.4+dfsg-2.2 [1860 kB] 1596s Get:240 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-modelmetrics amd64 1.2.2.2-1build1 [128 kB] 1596s Get:241 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB] 1596s Get:242 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proc amd64 1.18.5-1 [966 kB] 1596s Get:243 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB] 1596s Get:244 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB] 1596s Get:245 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dplyr amd64 1.1.4-1 [1515 kB] 1596s Get:246 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tzdb amd64 0.4.0-2 [521 kB] 1596s Get:247 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-clock amd64 0.7.0-1.1 [1765 kB] 1596s Get:248 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ellipsis amd64 0.3.2-2 [35.6 kB] 1596s Get:249 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gower amd64 1.0.1-1 [207 kB] 1596s Get:250 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-hardhat all 1.4.0+dfsg-1 [565 kB] 1596s Get:251 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rpart amd64 4.1.23-1build1 [661 kB] 1596s Get:252 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nnet amd64 7.3-19-2build1 [112 kB] 1596s Get:253 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shape all 1.4.6-1 [770 kB] 1596s Get:254 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diagram all 1.6.5-2 [656 kB] 1596s Get:255 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernsmooth amd64 2.23-24-1 [92.9 kB] 1596s Get:256 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-globals all 0.16.3-1 [120 kB] 1596s Get:257 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-listenv all 0.9.1+dfsg-1 [112 kB] 1596s Get:258 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-parallelly amd64 1.37.1-1build1 [365 kB] 1596s Get:259 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-future all 1.33.1+dfsg-1 [634 kB] 1596s Get:260 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-future.apply all 1.11.2+dfsg-1 [172 kB] 1596s Get:261 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-numderiv all 2016.8-1.1-3 [115 kB] 1596s Get:262 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-progressr all 0.14.0-1 [338 kB] 1596s Get:263 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-squarem all 2021.1-1 [179 kB] 1596s Get:264 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lava all 1.7.3+dfsg-1 [2166 kB] 1596s Get:265 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-prodlim amd64 2024.06.25-1 [415 kB] 1596s Get:266 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ipred amd64 0.9-14-1 [383 kB] 1596s Get:267 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-timechange amd64 0.3.0-1 [178 kB] 1596s Get:268 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lubridate amd64 1.9.3+dfsg-1 [1010 kB] 1596s Get:269 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-purrr amd64 1.0.2-1 [502 kB] 1596s Get:270 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringi amd64 1.8.3-1 [873 kB] 1596s Get:271 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 1596s Get:272 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 1596s Get:273 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-timedate amd64 4032.109-1 [1229 kB] 1596s Get:274 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-recipes all 1.0.10+dfsg-2 [2004 kB] 1596s Get:275 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reshape2 amd64 1.4.4-2build1 [114 kB] 1596s Get:276 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-caret amd64 6.0-94+dfsg-1 [3434 kB] 1596s Get:277 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-catools amd64 1.18.2-1 [201 kB] 1596s Get:278 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cluster amd64 2.1.6-1build1 [553 kB] 1596s Get:279 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 0.24.0-1 [93.5 kB] 1596s Get:280 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xfun amd64 0.45+dfsg-1 [518 kB] 1596s Get:281 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 1596s Get:282 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 1596s Get:283 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-knitr all 1.47+dfsg-1 [911 kB] 1596s Get:284 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.2-1 [1300 kB] 1596s Get:285 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tinytex all 0.51-1 [145 kB] 1596s Get:286 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-modernizr all 3.13.0-0.1 [101 kB] 1596s Get:287 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.3.2+dfsg-1 [123 kB] 1596s Get:288 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.0+dfsg-1 [287 kB] 1596s Get:289 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 1596s Get:290 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 1596s Get:291 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 1596s Get:292 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.1-1 [131 kB] 1596s Get:293 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 1596s Get:294 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.8.1.1+dfsg-1 [2873 kB] 1596s Get:295 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rmarkdown all 2.27+dfsg-1 [1501 kB] 1596s Get:296 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 1596s Get:297 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-miniui all 0.1.1.1-3build1 [36.1 kB] 1596s Get:298 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shinyjs all 2.1.0-1 [967 kB] 1596s Get:299 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colourpicker all 1.3.0+dfsg-1 [1191 kB] 1596s Get:300 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-conquer amd64 1.3.3-1 [499 kB] 1596s Get:301 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cowplot all 1.1.3+dfsg-1 [614 kB] 1596s Get:302 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lazyeval amd64 0.2.2-1build1 [144 kB] 1596s Get:303 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 1596s Get:304 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-deldir amd64 2.0-4-1build1 [270 kB] 1596s Get:305 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-deoptimr all 1.1-3-1 [74.4 kB] 1596s Get:306 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 1597s Get:307 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 1597s Get:308 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dotcall64 amd64 1.1-1-1 [38.1 kB] 1597s Get:309 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sitmo amd64 2.0.2-1 [130 kB] 1597s Get:310 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dqrng amd64 0.3.2+dfsg-1 [161 kB] 1597s Get:311 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastdummies all 1.7.3-2 [49.9 kB] 1597s Get:312 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fitdistrplus all 1.1-11-1 [1902 kB] 1597s Get:313 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fnn amd64 1.1.4-1 [122 kB] 1597s Get:314 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtools amd64 3.9.5-1 [340 kB] 1597s Get:315 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gdata all 3.0.1-1 [491 kB] 1597s Get:316 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggrepel amd64 0.9.5-2 [254 kB] 1597s Get:317 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggridges all 0.5.6-1 [2195 kB] 1597s Get:318 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-goftest amd64 1.2-3-1 [59.5 kB] 1597s Get:319 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gplots all 3.2.0-1 [484 kB] 1597s Get:320 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gridextra all 2.3-3build1 [1024 kB] 1597s Get:321 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rprojroot all 2.0.4-1 [124 kB] 1597s Get:322 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-here all 1.0.1-2 [50.3 kB] 1597s Get:323 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ica all 1.0-3-1 [85.4 kB] 1597s Get:324 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-igraph amd64 2.0.3-1 [5098 kB] 1597s Get:325 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-irlba amd64 2.3.5.1-4 [295 kB] 1597s Get:326 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernlab amd64 0.9-33-1 [1947 kB] 1597s Get:327 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpptoml amd64 0.2.2+dfsg-1 [110 kB] 1597s Get:328 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-png amd64 0.1-8-1build2 [40.6 kB] 1597s Get:329 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reticulate amd64 1.35.0+dfsg-1 [1195 kB] 1597s Get:330 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-leiden all 0.4.3.1+dfsg-1 [71.9 kB] 1597s Get:331 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-zoo amd64 1.8-12-2 [984 kB] 1597s Get:332 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lmtest amd64 0.9.40-1 [396 kB] 1597s Get:333 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mathjaxr all 1.6-0-1 [605 kB] 1597s Get:334 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixmodels all 0.5-3-1 [361 kB] 1597s Get:335 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rbibutils amd64 2.2.16-1 [754 kB] 1597s Get:336 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rdpack all 2.6-1 [742 kB] 1597s Get:337 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mnormt amd64 2.1.1-2 [170 kB] 1597s Get:338 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sparsem amd64 1.84-2-1 [813 kB] 1597s Get:339 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-quantreg amd64 5.98-1 [1540 kB] 1597s Get:340 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sn all 2.1.1-2 [1815 kB] 1597s Get:341 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mvtnorm amd64 1.2-5-1 [749 kB] 1597s Get:342 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tfisher all 0.2.0-3 [79.8 kB] 1597s Get:343 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plotrix all 3.8-4-1 [1120 kB] 1597s Get:344 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-th.data all 1.1-2-2 [8794 kB] 1597s Get:345 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sandwich all 3.1-0-1 [1484 kB] 1597s Get:346 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-multcomp all 1.4-26-2 [699 kB] 1597s Get:347 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mutoss all 0.1-13-1 [1123 kB] 1597s Get:348 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-robustbase amd64 0.99-3-1 [3033 kB] 1597s Get:349 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-qqconf amd64 1.3.2+dfsg-1 [157 kB] 1597s Get:350 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-metap all 1.9-1 [564 kB] 1597s Get:351 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plotly all 4.10.4+dfsg-2 [3666 kB] 1597s Get:352 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-segmented all 2.1-0-1 [1360 kB] 1597s Get:353 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mixtools amd64 2.0.0-1 [1399 kB] 1597s Get:354 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-patchwork all 1.2.0-1 [3161 kB] 1597s Get:355 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pbapply all 1.7-2-1 [102 kB] 1597s Get:356 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgbuild all 1.4.4-1 [212 kB] 1597s Get:357 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgload all 1.4.0-1 [247 kB] 1597s Get:358 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-polyclip amd64 1.10-6-1 [113 kB] 1597s Get:359 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 1597s Get:360 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 1597s Get:361 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.oo all 1.26.0-1 [955 kB] 1597s Get:362 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.utils all 2.12.3-1 [1386 kB] 1597s Get:363 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rann amd64 2.6.1-1build2 [41.9 kB] 1597s Get:364 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppannoy amd64 0.0.22-1 [235 kB] 1597s Get:365 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.0-1build1 [1425 kB] 1597s Get:366 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpphnsw amd64 0.5.0+ds-1 [171 kB] 1597s Get:367 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppprogress all 0.4.2-2build1 [22.0 kB] 1597s Get:368 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 1597s Get:369 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rocr all 1.0-11-3 [456 kB] 1597s Get:370 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rspectra amd64 0.16-1-1 [413 kB] 1597s Get:371 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rsvd all 1.0.5-1 [3589 kB] 1597s Get:372 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rtsne amd64 0.17-1 [109 kB] 1597s Get:373 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scattermore amd64 1.2-1 [331 kB] 1597s Get:374 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sctransform amd64 0.4.1-1 [504 kB] 1597s Get:375 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sp amd64 1:2.1-2+dfsg-1 [1447 kB] 1597s Get:376 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spam amd64 2.10-0-1 [2765 kB] 1597s Get:377 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-seuratobject amd64 5.0.2-1 [1744 kB] 1597s Get:378 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.utils amd64 3.0-4-1 [361 kB] 1597s Get:379 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.data all 3.0-4-1 [4090 kB] 1597s Get:380 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.geom amd64 3.2-9-2 [3946 kB] 1597s Get:381 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.random amd64 3.2-3-1 [1169 kB] 1597s Get:382 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tensor all 1.5-4 [15.7 kB] 1597s Get:383 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.sparse amd64 3.0-3-1 [215 kB] 1597s Get:384 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.explore amd64 3.2-7-1 [3432 kB] 1597s Get:385 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-uwot amd64 0.1.16-2 [642 kB] 1597s Get:386 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-seurat amd64 5.1.0-1 [3255 kB] 1597s Get:387 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-waldo all 0.5.2-1build1 [120 kB] 1597s Get:388 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-testthat amd64 3.2.1.1-1 [1636 kB] 1597s Get:389 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vgam amd64 1.1-9-1 [7312 kB] 1598s Preconfiguring packages ... 1598s Fetched 447 MB in 4s (110 MB/s) 1598s Selecting previously unselected package libisl23:amd64. 1598s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75323 files and directories currently installed.) 1598s Preparing to unpack .../000-libisl23_0.27-1_amd64.deb ... 1598s Unpacking libisl23:amd64 (0.27-1) ... 1598s Selecting previously unselected package libmpc3:amd64. 1598s Preparing to unpack .../001-libmpc3_1.3.1-1build2_amd64.deb ... 1598s Unpacking libmpc3:amd64 (1.3.1-1build2) ... 1598s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 1598s Preparing to unpack .../002-cpp-14-x86-64-linux-gnu_14.2.0-7ubuntu1_amd64.deb ... 1598s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-7ubuntu1) ... 1599s Selecting previously unselected package cpp-14. 1599s Preparing to unpack .../003-cpp-14_14.2.0-7ubuntu1_amd64.deb ... 1599s Unpacking cpp-14 (14.2.0-7ubuntu1) ... 1599s Selecting previously unselected package cpp-x86-64-linux-gnu. 1599s Preparing to unpack .../004-cpp-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 1599s Unpacking cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 1599s Selecting previously unselected package cpp. 1599s Preparing to unpack .../005-cpp_4%3a14.1.0-2ubuntu1_amd64.deb ... 1599s Unpacking cpp (4:14.1.0-2ubuntu1) ... 1599s Selecting previously unselected package libcc1-0:amd64. 1599s Preparing to unpack .../006-libcc1-0_14.2.0-7ubuntu1_amd64.deb ... 1599s Unpacking libcc1-0:amd64 (14.2.0-7ubuntu1) ... 1599s Selecting previously unselected package libgomp1:amd64. 1599s Preparing to unpack .../007-libgomp1_14.2.0-7ubuntu1_amd64.deb ... 1599s Unpacking libgomp1:amd64 (14.2.0-7ubuntu1) ... 1599s Selecting previously unselected package libitm1:amd64. 1599s Preparing to unpack .../008-libitm1_14.2.0-7ubuntu1_amd64.deb ... 1599s Unpacking libitm1:amd64 (14.2.0-7ubuntu1) ... 1599s Selecting previously unselected package libasan8:amd64. 1599s Preparing to unpack .../009-libasan8_14.2.0-7ubuntu1_amd64.deb ... 1599s Unpacking libasan8:amd64 (14.2.0-7ubuntu1) ... 1599s Selecting previously unselected package liblsan0:amd64. 1599s Preparing to unpack .../010-liblsan0_14.2.0-7ubuntu1_amd64.deb ... 1599s Unpacking liblsan0:amd64 (14.2.0-7ubuntu1) ... 1599s Selecting previously unselected package libtsan2:amd64. 1599s Preparing to unpack .../011-libtsan2_14.2.0-7ubuntu1_amd64.deb ... 1599s Unpacking libtsan2:amd64 (14.2.0-7ubuntu1) ... 1599s Selecting previously unselected package libubsan1:amd64. 1599s Preparing to unpack .../012-libubsan1_14.2.0-7ubuntu1_amd64.deb ... 1599s Unpacking libubsan1:amd64 (14.2.0-7ubuntu1) ... 1599s Selecting previously unselected package libhwasan0:amd64. 1599s Preparing to unpack .../013-libhwasan0_14.2.0-7ubuntu1_amd64.deb ... 1599s Unpacking libhwasan0:amd64 (14.2.0-7ubuntu1) ... 1599s Selecting previously unselected package libquadmath0:amd64. 1599s Preparing to unpack .../014-libquadmath0_14.2.0-7ubuntu1_amd64.deb ... 1599s Unpacking libquadmath0:amd64 (14.2.0-7ubuntu1) ... 1599s Selecting previously unselected package libgcc-14-dev:amd64. 1599s Preparing to unpack .../015-libgcc-14-dev_14.2.0-7ubuntu1_amd64.deb ... 1599s Unpacking libgcc-14-dev:amd64 (14.2.0-7ubuntu1) ... 1599s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 1599s Preparing to unpack .../016-gcc-14-x86-64-linux-gnu_14.2.0-7ubuntu1_amd64.deb ... 1599s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-7ubuntu1) ... 1600s Selecting previously unselected package gcc-14. 1600s Preparing to unpack .../017-gcc-14_14.2.0-7ubuntu1_amd64.deb ... 1600s Unpacking gcc-14 (14.2.0-7ubuntu1) ... 1600s Selecting previously unselected package gcc-x86-64-linux-gnu. 1600s Preparing to unpack .../018-gcc-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 1600s Unpacking gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 1600s Selecting previously unselected package gcc. 1600s Preparing to unpack .../019-gcc_4%3a14.1.0-2ubuntu1_amd64.deb ... 1600s Unpacking gcc (4:14.1.0-2ubuntu1) ... 1600s Selecting previously unselected package libstdc++-14-dev:amd64. 1600s Preparing to unpack .../020-libstdc++-14-dev_14.2.0-7ubuntu1_amd64.deb ... 1600s Unpacking libstdc++-14-dev:amd64 (14.2.0-7ubuntu1) ... 1600s Selecting previously unselected package g++-14-x86-64-linux-gnu. 1600s Preparing to unpack .../021-g++-14-x86-64-linux-gnu_14.2.0-7ubuntu1_amd64.deb ... 1600s Unpacking g++-14-x86-64-linux-gnu (14.2.0-7ubuntu1) ... 1601s Selecting previously unselected package g++-14. 1601s Preparing to unpack .../022-g++-14_14.2.0-7ubuntu1_amd64.deb ... 1601s Unpacking g++-14 (14.2.0-7ubuntu1) ... 1601s Selecting previously unselected package g++-x86-64-linux-gnu. 1601s Preparing to unpack .../023-g++-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 1601s Unpacking g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 1601s Selecting previously unselected package g++. 1601s Preparing to unpack .../024-g++_4%3a14.1.0-2ubuntu1_amd64.deb ... 1601s Unpacking g++ (4:14.1.0-2ubuntu1) ... 1601s Selecting previously unselected package build-essential. 1601s Preparing to unpack .../025-build-essential_12.10ubuntu1_amd64.deb ... 1601s Unpacking build-essential (12.10ubuntu1) ... 1601s Selecting previously unselected package dctrl-tools. 1601s Preparing to unpack .../026-dctrl-tools_2.24-3build3_amd64.deb ... 1601s Unpacking dctrl-tools (2.24-3build3) ... 1601s Selecting previously unselected package fonts-dejavu-mono. 1601s Preparing to unpack .../027-fonts-dejavu-mono_2.37-8_all.deb ... 1601s Unpacking fonts-dejavu-mono (2.37-8) ... 1601s Selecting previously unselected package fonts-dejavu-core. 1601s Preparing to unpack .../028-fonts-dejavu-core_2.37-8_all.deb ... 1601s Unpacking fonts-dejavu-core (2.37-8) ... 1601s Selecting previously unselected package fontconfig-config. 1601s Preparing to unpack .../029-fontconfig-config_2.15.0-1.1ubuntu2_amd64.deb ... 1601s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 1601s Selecting previously unselected package libfontconfig1:amd64. 1601s Preparing to unpack .../030-libfontconfig1_2.15.0-1.1ubuntu2_amd64.deb ... 1601s Unpacking libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ... 1601s Selecting previously unselected package fontconfig. 1601s Preparing to unpack .../031-fontconfig_2.15.0-1.1ubuntu2_amd64.deb ... 1601s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 1601s Selecting previously unselected package fonts-font-awesome. 1601s Preparing to unpack .../032-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 1601s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 1601s Selecting previously unselected package fonts-glyphicons-halflings. 1601s Preparing to unpack .../033-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 1601s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 1601s Selecting previously unselected package fonts-mathjax. 1601s Preparing to unpack .../034-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 1601s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 1602s Selecting previously unselected package libgfortran5:amd64. 1602s Preparing to unpack .../035-libgfortran5_14.2.0-7ubuntu1_amd64.deb ... 1602s Unpacking libgfortran5:amd64 (14.2.0-7ubuntu1) ... 1602s Selecting previously unselected package libgfortran-14-dev:amd64. 1602s Preparing to unpack .../036-libgfortran-14-dev_14.2.0-7ubuntu1_amd64.deb ... 1602s Unpacking libgfortran-14-dev:amd64 (14.2.0-7ubuntu1) ... 1602s Selecting previously unselected package gfortran-14-x86-64-linux-gnu. 1602s Preparing to unpack .../037-gfortran-14-x86-64-linux-gnu_14.2.0-7ubuntu1_amd64.deb ... 1602s Unpacking gfortran-14-x86-64-linux-gnu (14.2.0-7ubuntu1) ... 1602s Selecting previously unselected package gfortran-14. 1602s Preparing to unpack .../038-gfortran-14_14.2.0-7ubuntu1_amd64.deb ... 1602s Unpacking gfortran-14 (14.2.0-7ubuntu1) ... 1602s Selecting previously unselected package gfortran-x86-64-linux-gnu. 1602s Preparing to unpack .../039-gfortran-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 1602s Unpacking gfortran-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 1602s Selecting previously unselected package gfortran. 1602s Preparing to unpack .../040-gfortran_4%3a14.1.0-2ubuntu1_amd64.deb ... 1602s Unpacking gfortran (4:14.1.0-2ubuntu1) ... 1602s Selecting previously unselected package icu-devtools. 1602s Preparing to unpack .../041-icu-devtools_74.2-1ubuntu4_amd64.deb ... 1602s Unpacking icu-devtools (74.2-1ubuntu4) ... 1602s Selecting previously unselected package javascript-common. 1602s Preparing to unpack .../042-javascript-common_11+nmu1_all.deb ... 1602s Unpacking javascript-common (11+nmu1) ... 1602s Selecting previously unselected package libsuitesparseconfig7:amd64. 1602s Preparing to unpack .../043-libsuitesparseconfig7_1%3a7.8.0+dfsg-1_amd64.deb ... 1602s Unpacking libsuitesparseconfig7:amd64 (1:7.8.0+dfsg-1) ... 1602s Selecting previously unselected package libamd3:amd64. 1602s Preparing to unpack .../044-libamd3_1%3a7.8.0+dfsg-1_amd64.deb ... 1602s Unpacking libamd3:amd64 (1:7.8.0+dfsg-1) ... 1602s Selecting previously unselected package libblas3:amd64. 1602s Preparing to unpack .../045-libblas3_3.12.0-3build2_amd64.deb ... 1602s Unpacking libblas3:amd64 (3.12.0-3build2) ... 1602s Selecting previously unselected package libblas-dev:amd64. 1602s Preparing to unpack .../046-libblas-dev_3.12.0-3build2_amd64.deb ... 1602s Unpacking libblas-dev:amd64 (3.12.0-3build2) ... 1602s Selecting previously unselected package libboost1.83-dev:amd64. 1602s Preparing to unpack .../047-libboost1.83-dev_1.83.0-3.2ubuntu2_amd64.deb ... 1602s Unpacking libboost1.83-dev:amd64 (1.83.0-3.2ubuntu2) ... 1605s Selecting previously unselected package libboost-dev:amd64. 1605s Preparing to unpack .../048-libboost-dev_1.83.0.2ubuntu1_amd64.deb ... 1605s Unpacking libboost-dev:amd64 (1.83.0.2ubuntu1) ... 1605s Selecting previously unselected package libbz2-dev:amd64. 1605s Preparing to unpack .../049-libbz2-dev_1.0.8-6_amd64.deb ... 1605s Unpacking libbz2-dev:amd64 (1.0.8-6) ... 1605s Selecting previously unselected package libpixman-1-0:amd64. 1605s Preparing to unpack .../050-libpixman-1-0_0.42.2-1build1_amd64.deb ... 1605s Unpacking libpixman-1-0:amd64 (0.42.2-1build1) ... 1605s Selecting previously unselected package libxcb-render0:amd64. 1605s Preparing to unpack .../051-libxcb-render0_1.17.0-2_amd64.deb ... 1605s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 1605s Selecting previously unselected package libxcb-shm0:amd64. 1605s Preparing to unpack .../052-libxcb-shm0_1.17.0-2_amd64.deb ... 1605s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 1606s Selecting previously unselected package libxrender1:amd64. 1606s Preparing to unpack .../053-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 1606s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 1606s Selecting previously unselected package libcairo2:amd64. 1606s Preparing to unpack .../054-libcairo2_1.18.2-2_amd64.deb ... 1606s Unpacking libcairo2:amd64 (1.18.2-2) ... 1606s Selecting previously unselected package libcolamd3:amd64. 1606s Preparing to unpack .../055-libcolamd3_1%3a7.8.0+dfsg-1_amd64.deb ... 1606s Unpacking libcolamd3:amd64 (1:7.8.0+dfsg-1) ... 1606s Selecting previously unselected package libdatrie1:amd64. 1606s Preparing to unpack .../056-libdatrie1_0.2.13-3build1_amd64.deb ... 1606s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 1606s Selecting previously unselected package libdeflate0:amd64. 1606s Preparing to unpack .../057-libdeflate0_1.21-1_amd64.deb ... 1606s Unpacking libdeflate0:amd64 (1.21-1) ... 1606s Selecting previously unselected package libdeflate-dev:amd64. 1606s Preparing to unpack .../058-libdeflate-dev_1.21-1_amd64.deb ... 1606s Unpacking libdeflate-dev:amd64 (1.21-1) ... 1606s Selecting previously unselected package libfftw3-double3:amd64. 1606s Preparing to unpack .../059-libfftw3-double3_3.3.10-1ubuntu4_amd64.deb ... 1606s Unpacking libfftw3-double3:amd64 (3.3.10-1ubuntu4) ... 1606s Selecting previously unselected package libltdl7:amd64. 1606s Preparing to unpack .../060-libltdl7_2.4.7-7build1_amd64.deb ... 1606s Unpacking libltdl7:amd64 (2.4.7-7build1) ... 1606s Selecting previously unselected package libglpk40:amd64. 1606s Preparing to unpack .../061-libglpk40_5.0-1build2_amd64.deb ... 1606s Unpacking libglpk40:amd64 (5.0-1build2) ... 1606s Selecting previously unselected package libgraphite2-3:amd64. 1606s Preparing to unpack .../062-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 1606s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 1606s Selecting previously unselected package libharfbuzz0b:amd64. 1606s Preparing to unpack .../063-libharfbuzz0b_9.0.0-1_amd64.deb ... 1606s Unpacking libharfbuzz0b:amd64 (9.0.0-1) ... 1606s Selecting previously unselected package x11-common. 1606s Preparing to unpack .../064-x11-common_1%3a7.7+23ubuntu3_all.deb ... 1606s Unpacking x11-common (1:7.7+23ubuntu3) ... 1606s Selecting previously unselected package libice6:amd64. 1606s Preparing to unpack .../065-libice6_2%3a1.0.10-1build3_amd64.deb ... 1606s Unpacking libice6:amd64 (2:1.0.10-1build3) ... 1606s Selecting previously unselected package libicu-dev:amd64. 1606s Preparing to unpack .../066-libicu-dev_74.2-1ubuntu4_amd64.deb ... 1606s Unpacking libicu-dev:amd64 (74.2-1ubuntu4) ... 1606s Selecting previously unselected package libjpeg-turbo8:amd64. 1607s Preparing to unpack .../067-libjpeg-turbo8_2.1.5-2ubuntu2_amd64.deb ... 1607s Unpacking libjpeg-turbo8:amd64 (2.1.5-2ubuntu2) ... 1607s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 1607s Preparing to unpack .../068-libjpeg-turbo8-dev_2.1.5-2ubuntu2_amd64.deb ... 1607s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-2ubuntu2) ... 1607s Selecting previously unselected package libjpeg8:amd64. 1607s Preparing to unpack .../069-libjpeg8_8c-2ubuntu11_amd64.deb ... 1607s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 1607s Selecting previously unselected package libjpeg8-dev:amd64. 1607s Preparing to unpack .../070-libjpeg8-dev_8c-2ubuntu11_amd64.deb ... 1607s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu11) ... 1607s Selecting previously unselected package libjpeg-dev:amd64. 1607s Preparing to unpack .../071-libjpeg-dev_8c-2ubuntu11_amd64.deb ... 1607s Unpacking libjpeg-dev:amd64 (8c-2ubuntu11) ... 1607s Selecting previously unselected package libjs-bootstrap. 1607s Preparing to unpack .../072-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 1607s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 1607s Selecting previously unselected package libjs-popper.js. 1607s Preparing to unpack .../073-libjs-popper.js_1.16.1+ds-6_all.deb ... 1607s Unpacking libjs-popper.js (1.16.1+ds-6) ... 1607s Selecting previously unselected package libjs-bootstrap4. 1607s Preparing to unpack .../074-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 1607s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 1607s Selecting previously unselected package libjs-d3. 1607s Preparing to unpack .../075-libjs-d3_3.5.17-4_all.deb ... 1607s Unpacking libjs-d3 (3.5.17-4) ... 1607s Selecting previously unselected package libjs-es5-shim. 1607s Preparing to unpack .../076-libjs-es5-shim_4.6.7-2_all.deb ... 1607s Unpacking libjs-es5-shim (4.6.7-2) ... 1607s Selecting previously unselected package libjs-highlight.js. 1607s Preparing to unpack .../077-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 1607s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 1607s Selecting previously unselected package libjs-jquery. 1607s Preparing to unpack .../078-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 1607s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 1607s Selecting previously unselected package libjs-jquery-datatables. 1607s Preparing to unpack .../079-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 1607s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 1607s Selecting previously unselected package libjs-sifter.js. 1607s Preparing to unpack .../080-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 1607s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 1607s Selecting previously unselected package libjs-microplugin.js. 1607s Preparing to unpack .../081-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 1607s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 1607s Selecting previously unselected package libjs-jquery-selectize.js. 1607s Preparing to unpack .../082-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 1607s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 1607s Selecting previously unselected package libjs-jquery-ui. 1607s Preparing to unpack .../083-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 1607s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 1607s Selecting previously unselected package libjs-json. 1607s Preparing to unpack .../084-libjs-json_0~20221030+~1.0.8-1_all.deb ... 1607s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 1607s Selecting previously unselected package libjs-prettify. 1607s Preparing to unpack .../085-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 1607s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 1607s Selecting previously unselected package liblapack3:amd64. 1608s Preparing to unpack .../086-liblapack3_3.12.0-3build2_amd64.deb ... 1608s Unpacking liblapack3:amd64 (3.12.0-3build2) ... 1608s Selecting previously unselected package liblapack-dev:amd64. 1608s Preparing to unpack .../087-liblapack-dev_3.12.0-3build2_amd64.deb ... 1608s Unpacking liblapack-dev:amd64 (3.12.0-3build2) ... 1608s Selecting previously unselected package liblerc4:amd64. 1608s Preparing to unpack .../088-liblerc4_4.0.0+ds-4ubuntu2_amd64.deb ... 1608s Unpacking liblerc4:amd64 (4.0.0+ds-4ubuntu2) ... 1608s Selecting previously unselected package liblua5.4-0:amd64. 1608s Preparing to unpack .../089-liblua5.4-0_5.4.6-3build2_amd64.deb ... 1608s Unpacking liblua5.4-0:amd64 (5.4.6-3build2) ... 1608s Selecting previously unselected package libncurses-dev:amd64. 1608s Preparing to unpack .../090-libncurses-dev_6.5-2_amd64.deb ... 1608s Unpacking libncurses-dev:amd64 (6.5-2) ... 1608s Selecting previously unselected package libthai-data. 1608s Preparing to unpack .../091-libthai-data_0.1.29-2build1_all.deb ... 1608s Unpacking libthai-data (0.1.29-2build1) ... 1608s Selecting previously unselected package libthai0:amd64. 1608s Preparing to unpack .../092-libthai0_0.1.29-2build1_amd64.deb ... 1608s Unpacking libthai0:amd64 (0.1.29-2build1) ... 1608s Selecting previously unselected package libpango-1.0-0:amd64. 1608s Preparing to unpack .../093-libpango-1.0-0_1.54.0+ds-2_amd64.deb ... 1608s Unpacking libpango-1.0-0:amd64 (1.54.0+ds-2) ... 1608s Selecting previously unselected package libpangoft2-1.0-0:amd64. 1608s Preparing to unpack .../094-libpangoft2-1.0-0_1.54.0+ds-2_amd64.deb ... 1608s Unpacking libpangoft2-1.0-0:amd64 (1.54.0+ds-2) ... 1608s Selecting previously unselected package libpangocairo-1.0-0:amd64. 1608s Preparing to unpack .../095-libpangocairo-1.0-0_1.54.0+ds-2_amd64.deb ... 1608s Unpacking libpangocairo-1.0-0:amd64 (1.54.0+ds-2) ... 1608s Selecting previously unselected package libpaper1:amd64. 1608s Preparing to unpack .../096-libpaper1_1.1.29build1_amd64.deb ... 1608s Unpacking libpaper1:amd64 (1.1.29build1) ... 1608s Selecting previously unselected package libpaper-utils. 1608s Preparing to unpack .../097-libpaper-utils_1.1.29build1_amd64.deb ... 1608s Unpacking libpaper-utils (1.1.29build1) ... 1608s Selecting previously unselected package libpcre2-16-0:amd64. 1608s Preparing to unpack .../098-libpcre2-16-0_10.42-4ubuntu3_amd64.deb ... 1608s Unpacking libpcre2-16-0:amd64 (10.42-4ubuntu3) ... 1608s Selecting previously unselected package libpcre2-32-0:amd64. 1608s Preparing to unpack .../099-libpcre2-32-0_10.42-4ubuntu3_amd64.deb ... 1608s Unpacking libpcre2-32-0:amd64 (10.42-4ubuntu3) ... 1608s Selecting previously unselected package libpcre2-posix3:amd64. 1608s Preparing to unpack .../100-libpcre2-posix3_10.42-4ubuntu3_amd64.deb ... 1608s Unpacking libpcre2-posix3:amd64 (10.42-4ubuntu3) ... 1608s Selecting previously unselected package libpcre2-dev:amd64. 1608s Preparing to unpack .../101-libpcre2-dev_10.42-4ubuntu3_amd64.deb ... 1608s Unpacking libpcre2-dev:amd64 (10.42-4ubuntu3) ... 1609s Selecting previously unselected package libpkgconf3:amd64. 1609s Preparing to unpack .../102-libpkgconf3_1.8.1-3ubuntu1_amd64.deb ... 1609s Unpacking libpkgconf3:amd64 (1.8.1-3ubuntu1) ... 1609s Selecting previously unselected package zlib1g-dev:amd64. 1609s Preparing to unpack .../103-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ... 1609s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 1609s Selecting previously unselected package libpng-dev:amd64. 1609s Preparing to unpack .../104-libpng-dev_1.6.44-1_amd64.deb ... 1609s Unpacking libpng-dev:amd64 (1.6.44-1) ... 1609s Selecting previously unselected package libreadline-dev:amd64. 1609s Preparing to unpack .../105-libreadline-dev_8.2-5_amd64.deb ... 1609s Unpacking libreadline-dev:amd64 (8.2-5) ... 1609s Selecting previously unselected package libsharpyuv0:amd64. 1609s Preparing to unpack .../106-libsharpyuv0_1.4.0-0.1_amd64.deb ... 1609s Unpacking libsharpyuv0:amd64 (1.4.0-0.1) ... 1609s Selecting previously unselected package libsm6:amd64. 1609s Preparing to unpack .../107-libsm6_2%3a1.2.3-1build3_amd64.deb ... 1609s Unpacking libsm6:amd64 (2:1.2.3-1build3) ... 1609s Selecting previously unselected package libtcl8.6:amd64. 1609s Preparing to unpack .../108-libtcl8.6_8.6.14+dfsg-1build1_amd64.deb ... 1609s Unpacking libtcl8.6:amd64 (8.6.14+dfsg-1build1) ... 1609s Selecting previously unselected package libjbig0:amd64. 1609s Preparing to unpack .../109-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 1609s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 1609s Selecting previously unselected package libwebp7:amd64. 1609s Preparing to unpack .../110-libwebp7_1.4.0-0.1_amd64.deb ... 1609s Unpacking libwebp7:amd64 (1.4.0-0.1) ... 1609s Selecting previously unselected package libtiff6:amd64. 1609s Preparing to unpack .../111-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ... 1609s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 1609s Selecting previously unselected package libxft2:amd64. 1609s Preparing to unpack .../112-libxft2_2.3.6-1build1_amd64.deb ... 1609s Unpacking libxft2:amd64 (2.3.6-1build1) ... 1609s Selecting previously unselected package libxss1:amd64. 1609s Preparing to unpack .../113-libxss1_1%3a1.2.3-1build3_amd64.deb ... 1609s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 1609s Selecting previously unselected package libtk8.6:amd64. 1609s Preparing to unpack .../114-libtk8.6_8.6.14-1build1_amd64.deb ... 1609s Unpacking libtk8.6:amd64 (8.6.14-1build1) ... 1609s Selecting previously unselected package libxt6t64:amd64. 1609s Preparing to unpack .../115-libxt6t64_1%3a1.2.1-1.2build1_amd64.deb ... 1609s Unpacking libxt6t64:amd64 (1:1.2.1-1.2build1) ... 1609s Selecting previously unselected package zip. 1609s Preparing to unpack .../116-zip_3.0-14_amd64.deb ... 1609s Unpacking zip (3.0-14) ... 1609s Selecting previously unselected package unzip. 1609s Preparing to unpack .../117-unzip_6.0-28ubuntu6_amd64.deb ... 1609s Unpacking unzip (6.0-28ubuntu6) ... 1609s Selecting previously unselected package xdg-utils. 1609s Preparing to unpack .../118-xdg-utils_1.2.1-0ubuntu1_all.deb ... 1609s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 1609s Selecting previously unselected package r-base-core. 1609s Preparing to unpack .../119-r-base-core_4.4.1-1_amd64.deb ... 1609s Unpacking r-base-core (4.4.1-1) ... 1610s Selecting previously unselected package r-cran-littler. 1610s Preparing to unpack .../120-r-cran-littler_0.3.20-1_amd64.deb ... 1610s Unpacking r-cran-littler (0.3.20-1) ... 1610s Selecting previously unselected package littler. 1610s Preparing to unpack .../121-littler_0.3.20-1_all.deb ... 1610s Unpacking littler (0.3.20-1) ... 1610s Selecting previously unselected package node-bootstrap-sass. 1610s Preparing to unpack .../122-node-bootstrap-sass_3.4.3-2_all.deb ... 1610s Unpacking node-bootstrap-sass (3.4.3-2) ... 1610s Selecting previously unselected package node-html5shiv. 1610s Preparing to unpack .../123-node-html5shiv_3.7.3+dfsg-5_all.deb ... 1610s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 1610s Selecting previously unselected package node-normalize.css. 1610s Preparing to unpack .../124-node-normalize.css_8.0.1-5_all.deb ... 1610s Unpacking node-normalize.css (8.0.1-5) ... 1610s Selecting previously unselected package pandoc-data. 1610s Preparing to unpack .../125-pandoc-data_3.1.11.1-3_all.deb ... 1610s Unpacking pandoc-data (3.1.11.1-3) ... 1610s Selecting previously unselected package pandoc. 1610s Preparing to unpack .../126-pandoc_3.1.11.1+ds-2_amd64.deb ... 1610s Unpacking pandoc (3.1.11.1+ds-2) ... 1611s Selecting previously unselected package liblzma-dev:amd64. 1611s Preparing to unpack .../127-liblzma-dev_5.6.2-2_amd64.deb ... 1611s Unpacking liblzma-dev:amd64 (5.6.2-2) ... 1611s Selecting previously unselected package pkgconf-bin. 1611s Preparing to unpack .../128-pkgconf-bin_1.8.1-3ubuntu1_amd64.deb ... 1611s Unpacking pkgconf-bin (1.8.1-3ubuntu1) ... 1611s Selecting previously unselected package pkgconf:amd64. 1611s Preparing to unpack .../129-pkgconf_1.8.1-3ubuntu1_amd64.deb ... 1611s Unpacking pkgconf:amd64 (1.8.1-3ubuntu1) ... 1611s Selecting previously unselected package libtirpc-dev:amd64. 1611s Preparing to unpack .../130-libtirpc-dev_1.3.4+ds-1.3_amd64.deb ... 1611s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1.3) ... 1611s Selecting previously unselected package r-base-dev. 1611s Preparing to unpack .../131-r-base-dev_4.4.1-1_all.deb ... 1611s Unpacking r-base-dev (4.4.1-1) ... 1611s Selecting previously unselected package pkg-r-autopkgtest. 1611s Preparing to unpack .../132-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 1611s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 1611s Selecting previously unselected package r-bioc-biocgenerics. 1611s Preparing to unpack .../133-r-bioc-biocgenerics_0.50.0-2_all.deb ... 1611s Unpacking r-bioc-biocgenerics (0.50.0-2) ... 1611s Selecting previously unselected package r-bioc-biobase. 1611s Preparing to unpack .../134-r-bioc-biobase_2.64.0-4_amd64.deb ... 1611s Unpacking r-bioc-biobase (2.64.0-4) ... 1611s Selecting previously unselected package r-bioc-s4vectors. 1611s Preparing to unpack .../135-r-bioc-s4vectors_0.42.1+dfsg-2_amd64.deb ... 1611s Unpacking r-bioc-s4vectors (0.42.1+dfsg-2) ... 1611s Selecting previously unselected package r-bioc-biocio. 1611s Preparing to unpack .../136-r-bioc-biocio_1.14.0+dfsg-1_all.deb ... 1611s Unpacking r-bioc-biocio (1.14.0+dfsg-1) ... 1611s Selecting previously unselected package r-cran-formatr. 1611s Preparing to unpack .../137-r-cran-formatr_1.14-2_all.deb ... 1611s Unpacking r-cran-formatr (1.14-2) ... 1612s Selecting previously unselected package r-cran-lambda.r. 1612s Preparing to unpack .../138-r-cran-lambda.r_1.2.4-2build1_all.deb ... 1612s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 1612s Selecting previously unselected package r-cran-futile.options. 1612s Preparing to unpack .../139-r-cran-futile.options_1.0.1-3build1_all.deb ... 1612s Unpacking r-cran-futile.options (1.0.1-3build1) ... 1612s Selecting previously unselected package r-cran-futile.logger. 1612s Preparing to unpack .../140-r-cran-futile.logger_1.4.3-4build1_all.deb ... 1612s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 1612s Selecting previously unselected package r-cran-snow. 1612s Preparing to unpack .../141-r-cran-snow_1%3a0.4.4-2_all.deb ... 1612s Unpacking r-cran-snow (1:0.4.4-2) ... 1612s Selecting previously unselected package r-cran-codetools. 1612s Preparing to unpack .../142-r-cran-codetools_0.2-20-1_all.deb ... 1612s Unpacking r-cran-codetools (0.2-20-1) ... 1612s Selecting previously unselected package r-cran-bh. 1612s Preparing to unpack .../143-r-cran-bh_1.84.0-1_all.deb ... 1612s Unpacking r-cran-bh (1.84.0-1) ... 1612s Selecting previously unselected package r-cran-cpp11. 1612s Preparing to unpack .../144-r-cran-cpp11_0.4.7-1_all.deb ... 1612s Unpacking r-cran-cpp11 (0.4.7-1) ... 1612s Selecting previously unselected package r-bioc-biocparallel. 1612s Preparing to unpack .../145-r-bioc-biocparallel_1.38.0-2_amd64.deb ... 1612s Unpacking r-bioc-biocparallel (1.38.0-2) ... 1612s Selecting previously unselected package r-bioc-iranges. 1612s Preparing to unpack .../146-r-bioc-iranges_2.38.1-1_amd64.deb ... 1612s Unpacking r-bioc-iranges (2.38.1-1) ... 1612s Selecting previously unselected package r-bioc-zlibbioc. 1612s Preparing to unpack .../147-r-bioc-zlibbioc_1.50.0+dfsg-2_all.deb ... 1612s Unpacking r-bioc-zlibbioc (1.50.0+dfsg-2) ... 1612s Selecting previously unselected package r-bioc-xvector. 1612s Preparing to unpack .../148-r-bioc-xvector_0.44.0-1_amd64.deb ... 1612s Unpacking r-bioc-xvector (0.44.0-1) ... 1612s Selecting previously unselected package r-cran-curl. 1612s Preparing to unpack .../149-r-cran-curl_5.2.1+dfsg-1_amd64.deb ... 1612s Unpacking r-cran-curl (5.2.1+dfsg-1) ... 1612s Selecting previously unselected package r-cran-jsonlite. 1612s Preparing to unpack .../150-r-cran-jsonlite_1.8.8+dfsg-1_amd64.deb ... 1612s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 1612s Selecting previously unselected package r-cran-mime. 1612s Preparing to unpack .../151-r-cran-mime_0.12-2_amd64.deb ... 1612s Unpacking r-cran-mime (0.12-2) ... 1612s Selecting previously unselected package r-cran-sys. 1612s Preparing to unpack .../152-r-cran-sys_3.4.2-1_amd64.deb ... 1612s Unpacking r-cran-sys (3.4.2-1) ... 1612s Selecting previously unselected package r-cran-askpass. 1612s Preparing to unpack .../153-r-cran-askpass_1.2.0-1_amd64.deb ... 1612s Unpacking r-cran-askpass (1.2.0-1) ... 1613s Selecting previously unselected package r-cran-openssl. 1613s Preparing to unpack .../154-r-cran-openssl_2.2.0+dfsg-1_amd64.deb ... 1613s Unpacking r-cran-openssl (2.2.0+dfsg-1) ... 1613s Selecting previously unselected package r-cran-r6. 1613s Preparing to unpack .../155-r-cran-r6_2.5.1-1_all.deb ... 1613s Unpacking r-cran-r6 (2.5.1-1) ... 1613s Selecting previously unselected package r-cran-httr. 1613s Preparing to unpack .../156-r-cran-httr_1.4.7+dfsg-1_all.deb ... 1613s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 1613s Selecting previously unselected package r-bioc-ucsc.utils. 1613s Preparing to unpack .../157-r-bioc-ucsc.utils_1.0.0+ds-2_all.deb ... 1613s Unpacking r-bioc-ucsc.utils (1.0.0+ds-2) ... 1613s Selecting previously unselected package r-bioc-genomeinfodbdata. 1613s Preparing to unpack .../158-r-bioc-genomeinfodbdata_1.2.12-1_all.deb ... 1613s Unpacking r-bioc-genomeinfodbdata (1.2.12-1) ... 1613s Selecting previously unselected package r-bioc-genomeinfodb. 1613s Preparing to unpack .../159-r-bioc-genomeinfodb_1.40.1+dfsg-1_all.deb ... 1613s Unpacking r-bioc-genomeinfodb (1.40.1+dfsg-1) ... 1613s Selecting previously unselected package r-cran-crayon. 1613s Preparing to unpack .../160-r-cran-crayon_1.5.2-1_all.deb ... 1613s Unpacking r-cran-crayon (1.5.2-1) ... 1613s Selecting previously unselected package r-bioc-biostrings. 1613s Preparing to unpack .../161-r-bioc-biostrings_2.72.1+dfsg-1_amd64.deb ... 1613s Unpacking r-bioc-biostrings (2.72.1+dfsg-1) ... 1613s Selecting previously unselected package r-cran-lattice. 1613s Preparing to unpack .../162-r-cran-lattice_0.22-6-1_amd64.deb ... 1613s Unpacking r-cran-lattice (0.22-6-1) ... 1613s Selecting previously unselected package r-cran-matrix. 1613s Preparing to unpack .../163-r-cran-matrix_1.7-0-3_amd64.deb ... 1613s Unpacking r-cran-matrix (1.7-0-3) ... 1613s Selecting previously unselected package r-cran-matrixstats. 1613s Preparing to unpack .../164-r-cran-matrixstats_1.3.0-1_amd64.deb ... 1613s Unpacking r-cran-matrixstats (1.3.0-1) ... 1613s Selecting previously unselected package r-bioc-matrixgenerics. 1613s Preparing to unpack .../165-r-bioc-matrixgenerics_1.16.0-2_all.deb ... 1613s Unpacking r-bioc-matrixgenerics (1.16.0-2) ... 1613s Selecting previously unselected package r-cran-abind. 1613s Preparing to unpack .../166-r-cran-abind_1.4-5-2_all.deb ... 1613s Unpacking r-cran-abind (1.4-5-2) ... 1613s Selecting previously unselected package r-bioc-s4arrays. 1613s Preparing to unpack .../167-r-bioc-s4arrays_1.4.1+dfsg-1_amd64.deb ... 1613s Unpacking r-bioc-s4arrays (1.4.1+dfsg-1) ... 1614s Selecting previously unselected package r-bioc-sparsearray. 1614s Preparing to unpack .../168-r-bioc-sparsearray_1.4.8+dfsg-1_amd64.deb ... 1614s Unpacking r-bioc-sparsearray (1.4.8+dfsg-1) ... 1614s Selecting previously unselected package r-bioc-delayedarray. 1614s Preparing to unpack .../169-r-bioc-delayedarray_0.30.1+dfsg-1_amd64.deb ... 1614s Unpacking r-bioc-delayedarray (0.30.1+dfsg-1) ... 1614s Selecting previously unselected package r-bioc-genomicranges. 1614s Preparing to unpack .../170-r-bioc-genomicranges_1.56.1+dfsg-1_amd64.deb ... 1614s Unpacking r-bioc-genomicranges (1.56.1+dfsg-1) ... 1614s Selecting previously unselected package r-bioc-summarizedexperiment. 1614s Preparing to unpack .../171-r-bioc-summarizedexperiment_1.34.0+dfsg-1_all.deb ... 1614s Unpacking r-bioc-summarizedexperiment (1.34.0+dfsg-1) ... 1614s Selecting previously unselected package r-cran-locfit. 1614s Preparing to unpack .../172-r-cran-locfit_1.5-9.9-1_amd64.deb ... 1614s Unpacking r-cran-locfit (1.5-9.9-1) ... 1614s Selecting previously unselected package r-cran-cli. 1614s Preparing to unpack .../173-r-cran-cli_3.6.2-1_amd64.deb ... 1614s Unpacking r-cran-cli (3.6.2-1) ... 1614s Selecting previously unselected package r-cran-glue. 1614s Preparing to unpack .../174-r-cran-glue_1.7.0-1_amd64.deb ... 1614s Unpacking r-cran-glue (1.7.0-1) ... 1614s Selecting previously unselected package r-cran-rlang. 1614s Preparing to unpack .../175-r-cran-rlang_1.1.4-1_amd64.deb ... 1614s Unpacking r-cran-rlang (1.1.4-1) ... 1614s Selecting previously unselected package r-cran-lifecycle. 1614s Preparing to unpack .../176-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 1614s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 1614s Selecting previously unselected package r-cran-gtable. 1614s Preparing to unpack .../177-r-cran-gtable_0.3.5+dfsg-1_all.deb ... 1614s Unpacking r-cran-gtable (0.3.5+dfsg-1) ... 1614s Selecting previously unselected package r-cran-isoband. 1614s Preparing to unpack .../178-r-cran-isoband_0.2.7-1_amd64.deb ... 1614s Unpacking r-cran-isoband (0.2.7-1) ... 1614s Selecting previously unselected package r-cran-mass. 1614s Preparing to unpack .../179-r-cran-mass_7.3-61-1_amd64.deb ... 1614s Unpacking r-cran-mass (7.3-61-1) ... 1614s Selecting previously unselected package r-cran-nlme. 1614s Preparing to unpack .../180-r-cran-nlme_3.1.166-1_amd64.deb ... 1614s Unpacking r-cran-nlme (3.1.166-1) ... 1614s Selecting previously unselected package r-cran-mgcv. 1614s Preparing to unpack .../181-r-cran-mgcv_1.9-1-1_amd64.deb ... 1614s Unpacking r-cran-mgcv (1.9-1-1) ... 1614s Selecting previously unselected package r-cran-farver. 1614s Preparing to unpack .../182-r-cran-farver_2.1.2-1_amd64.deb ... 1614s Unpacking r-cran-farver (2.1.2-1) ... 1614s Selecting previously unselected package r-cran-labeling. 1614s Preparing to unpack .../183-r-cran-labeling_0.4.3-1_all.deb ... 1614s Unpacking r-cran-labeling (0.4.3-1) ... 1614s Selecting previously unselected package r-cran-colorspace. 1614s Preparing to unpack .../184-r-cran-colorspace_2.1-0+dfsg-1_amd64.deb ... 1614s Unpacking r-cran-colorspace (2.1-0+dfsg-1) ... 1614s Selecting previously unselected package r-cran-munsell. 1614s Preparing to unpack .../185-r-cran-munsell_0.5.1-1_all.deb ... 1614s Unpacking r-cran-munsell (0.5.1-1) ... 1615s Selecting previously unselected package r-cran-rcolorbrewer. 1615s Preparing to unpack .../186-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 1615s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 1615s Selecting previously unselected package r-cran-viridislite. 1615s Preparing to unpack .../187-r-cran-viridislite_0.4.2-2_all.deb ... 1615s Unpacking r-cran-viridislite (0.4.2-2) ... 1615s Selecting previously unselected package r-cran-scales. 1615s Preparing to unpack .../188-r-cran-scales_1.3.0-1_all.deb ... 1615s Unpacking r-cran-scales (1.3.0-1) ... 1615s Selecting previously unselected package r-cran-fansi. 1615s Preparing to unpack .../189-r-cran-fansi_1.0.5-1_amd64.deb ... 1615s Unpacking r-cran-fansi (1.0.5-1) ... 1615s Selecting previously unselected package r-cran-magrittr. 1615s Preparing to unpack .../190-r-cran-magrittr_2.0.3-1_amd64.deb ... 1615s Unpacking r-cran-magrittr (2.0.3-1) ... 1615s Selecting previously unselected package r-cran-utf8. 1615s Preparing to unpack .../191-r-cran-utf8_1.2.4-1_amd64.deb ... 1615s Unpacking r-cran-utf8 (1.2.4-1) ... 1615s Selecting previously unselected package r-cran-vctrs. 1615s Preparing to unpack .../192-r-cran-vctrs_0.6.5-1_amd64.deb ... 1615s Unpacking r-cran-vctrs (0.6.5-1) ... 1615s Selecting previously unselected package r-cran-pillar. 1615s Preparing to unpack .../193-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 1615s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 1615s Selecting previously unselected package r-cran-pkgconfig. 1615s Preparing to unpack .../194-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 1615s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 1615s Selecting previously unselected package r-cran-tibble. 1615s Preparing to unpack .../195-r-cran-tibble_3.2.1+dfsg-2_amd64.deb ... 1615s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 1615s Selecting previously unselected package r-cran-withr. 1615s Preparing to unpack .../196-r-cran-withr_3.0.0+dfsg-1_all.deb ... 1615s Unpacking r-cran-withr (3.0.0+dfsg-1) ... 1615s Selecting previously unselected package r-cran-ggplot2. 1615s Preparing to unpack .../197-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 1615s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 1615s Selecting previously unselected package r-cran-pkgkitten. 1615s Preparing to unpack .../198-r-cran-pkgkitten_0.2.4-1_all.deb ... 1615s Unpacking r-cran-pkgkitten (0.2.4-1) ... 1615s Selecting previously unselected package r-cran-rcpp. 1615s Preparing to unpack .../199-r-cran-rcpp_1.0.13-1_amd64.deb ... 1615s Unpacking r-cran-rcpp (1.0.13-1) ... 1616s Selecting previously unselected package r-cran-rcpparmadillo. 1616s Preparing to unpack .../200-r-cran-rcpparmadillo_14.0.0-1-1_amd64.deb ... 1616s Unpacking r-cran-rcpparmadillo (14.0.0-1-1) ... 1616s Selecting previously unselected package r-bioc-deseq2. 1616s Preparing to unpack .../201-r-bioc-deseq2_1.44.0+dfsg-1_amd64.deb ... 1616s Unpacking r-bioc-deseq2 (1.44.0+dfsg-1) ... 1616s Selecting previously unselected package r-cran-bitops. 1616s Preparing to unpack .../202-r-cran-bitops_1.0-7-1_amd64.deb ... 1616s Unpacking r-cran-bitops (1.0-7-1) ... 1616s Selecting previously unselected package r-bioc-rhtslib. 1616s Preparing to unpack .../203-r-bioc-rhtslib_3.0.0+dfsg-1_amd64.deb ... 1616s Unpacking r-bioc-rhtslib (3.0.0+dfsg-1) ... 1616s Selecting previously unselected package r-bioc-rsamtools. 1616s Preparing to unpack .../204-r-bioc-rsamtools_2.20.0+dfsg-1_amd64.deb ... 1616s Unpacking r-bioc-rsamtools (2.20.0+dfsg-1) ... 1616s Selecting previously unselected package r-bioc-genomicalignments. 1616s Preparing to unpack .../205-r-bioc-genomicalignments_1.40.0-1_amd64.deb ... 1616s Unpacking r-bioc-genomicalignments (1.40.0-1) ... 1616s Selecting previously unselected package r-cran-statmod. 1616s Preparing to unpack .../206-r-cran-statmod_1.5.0-1_amd64.deb ... 1616s Unpacking r-cran-statmod (1.5.0-1) ... 1616s Selecting previously unselected package r-bioc-limma. 1616s Preparing to unpack .../207-r-bioc-limma_3.60.4+dfsg-1_amd64.deb ... 1616s Unpacking r-bioc-limma (3.60.4+dfsg-1) ... 1616s Selecting previously unselected package r-cran-survival. 1616s Preparing to unpack .../208-r-cran-survival_3.7-0-1_amd64.deb ... 1616s Unpacking r-cran-survival (3.7-0-1) ... 1616s Selecting previously unselected package r-bioc-multtest. 1616s Preparing to unpack .../209-r-bioc-multtest_2.60.0-1_amd64.deb ... 1616s Unpacking r-bioc-multtest (2.60.0-1) ... 1616s Selecting previously unselected package r-cran-xml. 1616s Preparing to unpack .../210-r-cran-xml_3.99-0.17-1_amd64.deb ... 1616s Unpacking r-cran-xml (3.99-0.17-1) ... 1616s Selecting previously unselected package r-cran-rcurl. 1616s Preparing to unpack .../211-r-cran-rcurl_1.98-1.14+dfsg-1build2_amd64.deb ... 1616s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1build2) ... 1616s Selecting previously unselected package r-cran-rjson. 1616s Preparing to unpack .../212-r-cran-rjson_0.2.21-1_amd64.deb ... 1616s Unpacking r-cran-rjson (0.2.21-1) ... 1617s Selecting previously unselected package r-cran-yaml. 1617s Preparing to unpack .../213-r-cran-yaml_2.3.8-2_amd64.deb ... 1617s Unpacking r-cran-yaml (2.3.8-2) ... 1617s Selecting previously unselected package r-cran-restfulr. 1617s Preparing to unpack .../214-r-cran-restfulr_0.0.15-1_amd64.deb ... 1617s Unpacking r-cran-restfulr (0.0.15-1) ... 1617s Selecting previously unselected package r-bioc-rtracklayer. 1617s Preparing to unpack .../215-r-bioc-rtracklayer_1.64.0-1_amd64.deb ... 1617s Unpacking r-bioc-rtracklayer (1.64.0-1) ... 1617s Selecting previously unselected package r-cran-digest. 1617s Preparing to unpack .../216-r-cran-digest_0.6.36-1_amd64.deb ... 1617s Unpacking r-cran-digest (0.6.36-1) ... 1617s Selecting previously unselected package r-cran-ape. 1617s Preparing to unpack .../217-r-cran-ape_5.8-1_amd64.deb ... 1617s Unpacking r-cran-ape (5.8-1) ... 1617s Selecting previously unselected package r-cran-base64enc. 1617s Preparing to unpack .../218-r-cran-base64enc_0.1-3-3_amd64.deb ... 1617s Unpacking r-cran-base64enc (0.1-3-3) ... 1617s Selecting previously unselected package r-cran-brio. 1617s Preparing to unpack .../219-r-cran-brio_1.1.5-1_amd64.deb ... 1617s Unpacking r-cran-brio (1.1.5-1) ... 1617s Selecting previously unselected package r-cran-fastmap. 1617s Preparing to unpack .../220-r-cran-fastmap_1.1.1-1_amd64.deb ... 1617s Unpacking r-cran-fastmap (1.1.1-1) ... 1617s Selecting previously unselected package r-cran-cachem. 1617s Preparing to unpack .../221-r-cran-cachem_1.0.8-1_amd64.deb ... 1617s Unpacking r-cran-cachem (1.0.8-1) ... 1617s Selecting previously unselected package r-cran-htmltools. 1617s Preparing to unpack .../222-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 1617s Unpacking r-cran-htmltools (0.5.8.1-1) ... 1617s Selecting previously unselected package r-cran-jquerylib. 1617s Preparing to unpack .../223-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 1617s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 1617s Selecting previously unselected package r-cran-memoise. 1617s Preparing to unpack .../224-r-cran-memoise_2.0.1-1_all.deb ... 1617s Unpacking r-cran-memoise (2.0.1-1) ... 1617s Selecting previously unselected package r-cran-fs. 1617s Preparing to unpack .../225-r-cran-fs_1.6.4+dfsg-1_amd64.deb ... 1617s Unpacking r-cran-fs (1.6.4+dfsg-1) ... 1617s Selecting previously unselected package r-cran-rappdirs. 1617s Preparing to unpack .../226-r-cran-rappdirs_0.3.3-1_amd64.deb ... 1617s Unpacking r-cran-rappdirs (0.3.3-1) ... 1617s Selecting previously unselected package r-cran-sass. 1617s Preparing to unpack .../227-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 1617s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 1617s Selecting previously unselected package r-cran-bslib. 1617s Preparing to unpack .../228-r-cran-bslib_0.7.0+dfsg-1_all.deb ... 1617s Unpacking r-cran-bslib (0.7.0+dfsg-1) ... 1617s Selecting previously unselected package r-cran-ps. 1617s Preparing to unpack .../229-r-cran-ps_1.7.6-1_amd64.deb ... 1617s Unpacking r-cran-ps (1.7.6-1) ... 1618s Selecting previously unselected package r-cran-processx. 1618s Preparing to unpack .../230-r-cran-processx_3.8.4-1_amd64.deb ... 1618s Unpacking r-cran-processx (3.8.4-1) ... 1618s Selecting previously unselected package r-cran-callr. 1618s Preparing to unpack .../231-r-cran-callr_3.7.6-1_all.deb ... 1618s Unpacking r-cran-callr (3.7.6-1) ... 1618s Selecting previously unselected package r-cran-class. 1618s Preparing to unpack .../232-r-cran-class_7.3-22-2build1_amd64.deb ... 1618s Unpacking r-cran-class (7.3-22-2build1) ... 1618s Selecting previously unselected package r-cran-proxy. 1618s Preparing to unpack .../233-r-cran-proxy_0.4-27-1_amd64.deb ... 1618s Unpacking r-cran-proxy (0.4-27-1) ... 1618s Selecting previously unselected package r-cran-e1071. 1618s Preparing to unpack .../234-r-cran-e1071_1.7-14-1_amd64.deb ... 1618s Unpacking r-cran-e1071 (1.7-14-1) ... 1618s Selecting previously unselected package r-cran-iterators. 1618s Preparing to unpack .../235-r-cran-iterators_1.0.14-1_all.deb ... 1618s Unpacking r-cran-iterators (1.0.14-1) ... 1618s Selecting previously unselected package r-cran-foreach. 1618s Preparing to unpack .../236-r-cran-foreach_1.5.2-1_all.deb ... 1618s Unpacking r-cran-foreach (1.5.2-1) ... 1618s Selecting previously unselected package r-cran-data.table. 1618s Preparing to unpack .../237-r-cran-data.table_1.15.4+dfsg-2.2_amd64.deb ... 1618s Unpacking r-cran-data.table (1.15.4+dfsg-2.2) ... 1618s Selecting previously unselected package r-cran-modelmetrics. 1618s Preparing to unpack .../238-r-cran-modelmetrics_1.2.2.2-1build1_amd64.deb ... 1618s Unpacking r-cran-modelmetrics (1.2.2.2-1build1) ... 1618s Selecting previously unselected package r-cran-plyr. 1618s Preparing to unpack .../239-r-cran-plyr_1.8.9-1_amd64.deb ... 1618s Unpacking r-cran-plyr (1.8.9-1) ... 1618s Selecting previously unselected package r-cran-proc. 1618s Preparing to unpack .../240-r-cran-proc_1.18.5-1_amd64.deb ... 1618s Unpacking r-cran-proc (1.18.5-1) ... 1618s Selecting previously unselected package r-cran-generics. 1618s Preparing to unpack .../241-r-cran-generics_0.1.3-1_all.deb ... 1618s Unpacking r-cran-generics (0.1.3-1) ... 1618s Selecting previously unselected package r-cran-tidyselect. 1618s Preparing to unpack .../242-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ... 1618s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 1618s Selecting previously unselected package r-cran-dplyr. 1618s Preparing to unpack .../243-r-cran-dplyr_1.1.4-1_amd64.deb ... 1618s Unpacking r-cran-dplyr (1.1.4-1) ... 1618s Selecting previously unselected package r-cran-tzdb. 1618s Preparing to unpack .../244-r-cran-tzdb_0.4.0-2_amd64.deb ... 1618s Unpacking r-cran-tzdb (0.4.0-2) ... 1618s Selecting previously unselected package r-cran-clock. 1618s Preparing to unpack .../245-r-cran-clock_0.7.0-1.1_amd64.deb ... 1618s Unpacking r-cran-clock (0.7.0-1.1) ... 1618s Selecting previously unselected package r-cran-ellipsis. 1618s Preparing to unpack .../246-r-cran-ellipsis_0.3.2-2_amd64.deb ... 1618s Unpacking r-cran-ellipsis (0.3.2-2) ... 1618s Selecting previously unselected package r-cran-gower. 1618s Preparing to unpack .../247-r-cran-gower_1.0.1-1_amd64.deb ... 1618s Unpacking r-cran-gower (1.0.1-1) ... 1619s Selecting previously unselected package r-cran-hardhat. 1619s Preparing to unpack .../248-r-cran-hardhat_1.4.0+dfsg-1_all.deb ... 1619s Unpacking r-cran-hardhat (1.4.0+dfsg-1) ... 1619s Selecting previously unselected package r-cran-rpart. 1619s Preparing to unpack .../249-r-cran-rpart_4.1.23-1build1_amd64.deb ... 1619s Unpacking r-cran-rpart (4.1.23-1build1) ... 1619s Selecting previously unselected package r-cran-nnet. 1619s Preparing to unpack .../250-r-cran-nnet_7.3-19-2build1_amd64.deb ... 1619s Unpacking r-cran-nnet (7.3-19-2build1) ... 1619s Selecting previously unselected package r-cran-shape. 1619s Preparing to unpack .../251-r-cran-shape_1.4.6-1_all.deb ... 1619s Unpacking r-cran-shape (1.4.6-1) ... 1619s Selecting previously unselected package r-cran-diagram. 1619s Preparing to unpack .../252-r-cran-diagram_1.6.5-2_all.deb ... 1619s Unpacking r-cran-diagram (1.6.5-2) ... 1619s Selecting previously unselected package r-cran-kernsmooth. 1619s Preparing to unpack .../253-r-cran-kernsmooth_2.23-24-1_amd64.deb ... 1619s Unpacking r-cran-kernsmooth (2.23-24-1) ... 1619s Selecting previously unselected package r-cran-globals. 1619s Preparing to unpack .../254-r-cran-globals_0.16.3-1_all.deb ... 1619s Unpacking r-cran-globals (0.16.3-1) ... 1619s Selecting previously unselected package r-cran-listenv. 1619s Preparing to unpack .../255-r-cran-listenv_0.9.1+dfsg-1_all.deb ... 1619s Unpacking r-cran-listenv (0.9.1+dfsg-1) ... 1619s Selecting previously unselected package r-cran-parallelly. 1619s Preparing to unpack .../256-r-cran-parallelly_1.37.1-1build1_amd64.deb ... 1619s Unpacking r-cran-parallelly (1.37.1-1build1) ... 1619s Selecting previously unselected package r-cran-future. 1619s Preparing to unpack .../257-r-cran-future_1.33.1+dfsg-1_all.deb ... 1619s Unpacking r-cran-future (1.33.1+dfsg-1) ... 1619s Selecting previously unselected package r-cran-future.apply. 1619s Preparing to unpack .../258-r-cran-future.apply_1.11.2+dfsg-1_all.deb ... 1619s Unpacking r-cran-future.apply (1.11.2+dfsg-1) ... 1619s Selecting previously unselected package r-cran-numderiv. 1619s Preparing to unpack .../259-r-cran-numderiv_2016.8-1.1-3_all.deb ... 1619s Unpacking r-cran-numderiv (2016.8-1.1-3) ... 1619s Selecting previously unselected package r-cran-progressr. 1619s Preparing to unpack .../260-r-cran-progressr_0.14.0-1_all.deb ... 1619s Unpacking r-cran-progressr (0.14.0-1) ... 1619s Selecting previously unselected package r-cran-squarem. 1619s Preparing to unpack .../261-r-cran-squarem_2021.1-1_all.deb ... 1619s Unpacking r-cran-squarem (2021.1-1) ... 1619s Selecting previously unselected package r-cran-lava. 1619s Preparing to unpack .../262-r-cran-lava_1.7.3+dfsg-1_all.deb ... 1619s Unpacking r-cran-lava (1.7.3+dfsg-1) ... 1619s Selecting previously unselected package r-cran-prodlim. 1619s Preparing to unpack .../263-r-cran-prodlim_2024.06.25-1_amd64.deb ... 1619s Unpacking r-cran-prodlim (2024.06.25-1) ... 1619s Selecting previously unselected package r-cran-ipred. 1619s Preparing to unpack .../264-r-cran-ipred_0.9-14-1_amd64.deb ... 1619s Unpacking r-cran-ipred (0.9-14-1) ... 1619s Selecting previously unselected package r-cran-timechange. 1619s Preparing to unpack .../265-r-cran-timechange_0.3.0-1_amd64.deb ... 1619s Unpacking r-cran-timechange (0.3.0-1) ... 1619s Selecting previously unselected package r-cran-lubridate. 1619s Preparing to unpack .../266-r-cran-lubridate_1.9.3+dfsg-1_amd64.deb ... 1619s Unpacking r-cran-lubridate (1.9.3+dfsg-1) ... 1620s Selecting previously unselected package r-cran-purrr. 1620s Preparing to unpack .../267-r-cran-purrr_1.0.2-1_amd64.deb ... 1620s Unpacking r-cran-purrr (1.0.2-1) ... 1620s Selecting previously unselected package r-cran-stringi. 1620s Preparing to unpack .../268-r-cran-stringi_1.8.3-1_amd64.deb ... 1620s Unpacking r-cran-stringi (1.8.3-1) ... 1620s Selecting previously unselected package r-cran-stringr. 1620s Preparing to unpack .../269-r-cran-stringr_1.5.1-1_all.deb ... 1620s Unpacking r-cran-stringr (1.5.1-1) ... 1620s Selecting previously unselected package r-cran-tidyr. 1620s Preparing to unpack .../270-r-cran-tidyr_1.3.1-1_amd64.deb ... 1620s Unpacking r-cran-tidyr (1.3.1-1) ... 1620s Selecting previously unselected package r-cran-timedate. 1620s Preparing to unpack .../271-r-cran-timedate_4032.109-1_amd64.deb ... 1620s Unpacking r-cran-timedate (4032.109-1) ... 1620s Selecting previously unselected package r-cran-recipes. 1620s Preparing to unpack .../272-r-cran-recipes_1.0.10+dfsg-2_all.deb ... 1620s Unpacking r-cran-recipes (1.0.10+dfsg-2) ... 1620s Selecting previously unselected package r-cran-reshape2. 1620s Preparing to unpack .../273-r-cran-reshape2_1.4.4-2build1_amd64.deb ... 1620s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 1620s Selecting previously unselected package r-cran-caret. 1620s Preparing to unpack .../274-r-cran-caret_6.0-94+dfsg-1_amd64.deb ... 1620s Unpacking r-cran-caret (6.0-94+dfsg-1) ... 1620s Selecting previously unselected package r-cran-catools. 1620s Preparing to unpack .../275-r-cran-catools_1.18.2-1_amd64.deb ... 1620s Unpacking r-cran-catools (1.18.2-1) ... 1620s Selecting previously unselected package r-cran-cluster. 1620s Preparing to unpack .../276-r-cran-cluster_2.1.6-1build1_amd64.deb ... 1620s Unpacking r-cran-cluster (2.1.6-1build1) ... 1620s Selecting previously unselected package r-cran-evaluate. 1620s Preparing to unpack .../277-r-cran-evaluate_0.24.0-1_all.deb ... 1620s Unpacking r-cran-evaluate (0.24.0-1) ... 1620s Selecting previously unselected package r-cran-xfun. 1620s Preparing to unpack .../278-r-cran-xfun_0.45+dfsg-1_amd64.deb ... 1620s Unpacking r-cran-xfun (0.45+dfsg-1) ... 1620s Selecting previously unselected package r-cran-highr. 1620s Preparing to unpack .../279-r-cran-highr_0.11+dfsg-1_all.deb ... 1620s Unpacking r-cran-highr (0.11+dfsg-1) ... 1620s Selecting previously unselected package libjs-mathjax. 1620s Preparing to unpack .../280-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 1620s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 1621s Selecting previously unselected package r-cran-knitr. 1621s Preparing to unpack .../281-r-cran-knitr_1.47+dfsg-1_all.deb ... 1621s Unpacking r-cran-knitr (1.47+dfsg-1) ... 1621s Selecting previously unselected package r-cran-fontawesome. 1621s Preparing to unpack .../282-r-cran-fontawesome_0.5.2-1_all.deb ... 1621s Unpacking r-cran-fontawesome (0.5.2-1) ... 1621s Selecting previously unselected package r-cran-tinytex. 1621s Preparing to unpack .../283-r-cran-tinytex_0.51-1_all.deb ... 1621s Unpacking r-cran-tinytex (0.51-1) ... 1621s Selecting previously unselected package libjs-modernizr. 1621s Preparing to unpack .../284-libjs-modernizr_3.13.0-0.1_all.deb ... 1621s Unpacking libjs-modernizr (3.13.0-0.1) ... 1621s Selecting previously unselected package r-cran-later. 1621s Preparing to unpack .../285-r-cran-later_1.3.2+dfsg-1_amd64.deb ... 1621s Unpacking r-cran-later (1.3.2+dfsg-1) ... 1622s Selecting previously unselected package r-cran-promises. 1622s Preparing to unpack .../286-r-cran-promises_1.3.0+dfsg-1_amd64.deb ... 1622s Unpacking r-cran-promises (1.3.0+dfsg-1) ... 1622s Selecting previously unselected package r-cran-httpuv. 1622s Preparing to unpack .../287-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 1622s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 1622s Selecting previously unselected package r-cran-xtable. 1622s Preparing to unpack .../288-r-cran-xtable_1%3a1.8-4-2_all.deb ... 1622s Unpacking r-cran-xtable (1:1.8-4-2) ... 1622s Selecting previously unselected package r-cran-sourcetools. 1622s Preparing to unpack .../289-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 1622s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 1622s Selecting previously unselected package r-cran-commonmark. 1622s Preparing to unpack .../290-r-cran-commonmark_1.9.1-1_amd64.deb ... 1622s Unpacking r-cran-commonmark (1.9.1-1) ... 1622s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 1622s Preparing to unpack .../291-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 1622s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 1622s Selecting previously unselected package r-cran-shiny. 1622s Preparing to unpack .../292-r-cran-shiny_1.8.1.1+dfsg-1_all.deb ... 1622s Unpacking r-cran-shiny (1.8.1.1+dfsg-1) ... 1622s Selecting previously unselected package r-cran-rmarkdown. 1622s Preparing to unpack .../293-r-cran-rmarkdown_2.27+dfsg-1_all.deb ... 1622s Unpacking r-cran-rmarkdown (2.27+dfsg-1) ... 1622s Selecting previously unselected package r-cran-htmlwidgets. 1622s Preparing to unpack .../294-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 1622s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 1622s Selecting previously unselected package r-cran-miniui. 1622s Preparing to unpack .../295-r-cran-miniui_0.1.1.1-3build1_all.deb ... 1622s Unpacking r-cran-miniui (0.1.1.1-3build1) ... 1622s Selecting previously unselected package r-cran-shinyjs. 1622s Preparing to unpack .../296-r-cran-shinyjs_2.1.0-1_all.deb ... 1622s Unpacking r-cran-shinyjs (2.1.0-1) ... 1622s Selecting previously unselected package r-cran-colourpicker. 1622s Preparing to unpack .../297-r-cran-colourpicker_1.3.0+dfsg-1_all.deb ... 1622s Unpacking r-cran-colourpicker (1.3.0+dfsg-1) ... 1622s Selecting previously unselected package r-cran-conquer. 1622s Preparing to unpack .../298-r-cran-conquer_1.3.3-1_amd64.deb ... 1622s Unpacking r-cran-conquer (1.3.3-1) ... 1622s Selecting previously unselected package r-cran-cowplot. 1622s Preparing to unpack .../299-r-cran-cowplot_1.1.3+dfsg-1_all.deb ... 1622s Unpacking r-cran-cowplot (1.1.3+dfsg-1) ... 1622s Selecting previously unselected package r-cran-lazyeval. 1622s Preparing to unpack .../300-r-cran-lazyeval_0.2.2-1build1_amd64.deb ... 1622s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 1622s Selecting previously unselected package r-cran-crosstalk. 1622s Preparing to unpack .../301-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 1622s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 1622s Selecting previously unselected package r-cran-deldir. 1622s Preparing to unpack .../302-r-cran-deldir_2.0-4-1build1_amd64.deb ... 1622s Unpacking r-cran-deldir (2.0-4-1build1) ... 1623s Selecting previously unselected package r-cran-deoptimr. 1623s Preparing to unpack .../303-r-cran-deoptimr_1.1-3-1_all.deb ... 1623s Unpacking r-cran-deoptimr (1.1-3-1) ... 1623s Selecting previously unselected package r-cran-desc. 1623s Preparing to unpack .../304-r-cran-desc_1.4.3-1_all.deb ... 1623s Unpacking r-cran-desc (1.4.3-1) ... 1623s Selecting previously unselected package r-cran-diffobj. 1623s Preparing to unpack .../305-r-cran-diffobj_0.3.5-1_amd64.deb ... 1623s Unpacking r-cran-diffobj (0.3.5-1) ... 1623s Selecting previously unselected package r-cran-dotcall64. 1623s Preparing to unpack .../306-r-cran-dotcall64_1.1-1-1_amd64.deb ... 1623s Unpacking r-cran-dotcall64 (1.1-1-1) ... 1623s Selecting previously unselected package r-cran-sitmo. 1623s Preparing to unpack .../307-r-cran-sitmo_2.0.2-1_amd64.deb ... 1623s Unpacking r-cran-sitmo (2.0.2-1) ... 1623s Selecting previously unselected package r-cran-dqrng. 1623s Preparing to unpack .../308-r-cran-dqrng_0.3.2+dfsg-1_amd64.deb ... 1623s Unpacking r-cran-dqrng (0.3.2+dfsg-1) ... 1623s Selecting previously unselected package r-cran-fastdummies. 1623s Preparing to unpack .../309-r-cran-fastdummies_1.7.3-2_all.deb ... 1623s Unpacking r-cran-fastdummies (1.7.3-2) ... 1623s Selecting previously unselected package r-cran-fitdistrplus. 1623s Preparing to unpack .../310-r-cran-fitdistrplus_1.1-11-1_all.deb ... 1623s Unpacking r-cran-fitdistrplus (1.1-11-1) ... 1623s Selecting previously unselected package r-cran-fnn. 1623s Preparing to unpack .../311-r-cran-fnn_1.1.4-1_amd64.deb ... 1623s Unpacking r-cran-fnn (1.1.4-1) ... 1623s Selecting previously unselected package r-cran-gtools. 1623s Preparing to unpack .../312-r-cran-gtools_3.9.5-1_amd64.deb ... 1623s Unpacking r-cran-gtools (3.9.5-1) ... 1623s Selecting previously unselected package r-cran-gdata. 1623s Preparing to unpack .../313-r-cran-gdata_3.0.1-1_all.deb ... 1623s Unpacking r-cran-gdata (3.0.1-1) ... 1623s Selecting previously unselected package r-cran-ggrepel. 1623s Preparing to unpack .../314-r-cran-ggrepel_0.9.5-2_amd64.deb ... 1623s Unpacking r-cran-ggrepel (0.9.5-2) ... 1623s Selecting previously unselected package r-cran-ggridges. 1623s Preparing to unpack .../315-r-cran-ggridges_0.5.6-1_all.deb ... 1623s Unpacking r-cran-ggridges (0.5.6-1) ... 1623s Selecting previously unselected package r-cran-goftest. 1623s Preparing to unpack .../316-r-cran-goftest_1.2-3-1_amd64.deb ... 1623s Unpacking r-cran-goftest (1.2-3-1) ... 1623s Selecting previously unselected package r-cran-gplots. 1623s Preparing to unpack .../317-r-cran-gplots_3.2.0-1_all.deb ... 1623s Unpacking r-cran-gplots (3.2.0-1) ... 1623s Selecting previously unselected package r-cran-gridextra. 1623s Preparing to unpack .../318-r-cran-gridextra_2.3-3build1_all.deb ... 1623s Unpacking r-cran-gridextra (2.3-3build1) ... 1623s Selecting previously unselected package r-cran-rprojroot. 1623s Preparing to unpack .../319-r-cran-rprojroot_2.0.4-1_all.deb ... 1623s Unpacking r-cran-rprojroot (2.0.4-1) ... 1623s Selecting previously unselected package r-cran-here. 1623s Preparing to unpack .../320-r-cran-here_1.0.1-2_all.deb ... 1623s Unpacking r-cran-here (1.0.1-2) ... 1624s Selecting previously unselected package r-cran-ica. 1624s Preparing to unpack .../321-r-cran-ica_1.0-3-1_all.deb ... 1624s Unpacking r-cran-ica (1.0-3-1) ... 1624s Selecting previously unselected package r-cran-igraph. 1624s Preparing to unpack .../322-r-cran-igraph_2.0.3-1_amd64.deb ... 1624s Unpacking r-cran-igraph (2.0.3-1) ... 1624s Selecting previously unselected package r-cran-irlba. 1624s Preparing to unpack .../323-r-cran-irlba_2.3.5.1-4_amd64.deb ... 1624s Unpacking r-cran-irlba (2.3.5.1-4) ... 1624s Selecting previously unselected package r-cran-kernlab. 1624s Preparing to unpack .../324-r-cran-kernlab_0.9-33-1_amd64.deb ... 1624s Unpacking r-cran-kernlab (0.9-33-1) ... 1624s Selecting previously unselected package r-cran-rcpptoml. 1624s Preparing to unpack .../325-r-cran-rcpptoml_0.2.2+dfsg-1_amd64.deb ... 1624s Unpacking r-cran-rcpptoml (0.2.2+dfsg-1) ... 1624s Selecting previously unselected package r-cran-png. 1624s Preparing to unpack .../326-r-cran-png_0.1-8-1build2_amd64.deb ... 1624s Unpacking r-cran-png (0.1-8-1build2) ... 1624s Selecting previously unselected package r-cran-reticulate. 1624s Preparing to unpack .../327-r-cran-reticulate_1.35.0+dfsg-1_amd64.deb ... 1624s Unpacking r-cran-reticulate (1.35.0+dfsg-1) ... 1624s Selecting previously unselected package r-cran-leiden. 1624s Preparing to unpack .../328-r-cran-leiden_0.4.3.1+dfsg-1_all.deb ... 1624s Unpacking r-cran-leiden (0.4.3.1+dfsg-1) ... 1624s Selecting previously unselected package r-cran-zoo. 1624s Preparing to unpack .../329-r-cran-zoo_1.8-12-2_amd64.deb ... 1624s Unpacking r-cran-zoo (1.8-12-2) ... 1624s Selecting previously unselected package r-cran-lmtest. 1624s Preparing to unpack .../330-r-cran-lmtest_0.9.40-1_amd64.deb ... 1624s Unpacking r-cran-lmtest (0.9.40-1) ... 1624s Selecting previously unselected package r-cran-mathjaxr. 1624s Preparing to unpack .../331-r-cran-mathjaxr_1.6-0-1_all.deb ... 1624s Unpacking r-cran-mathjaxr (1.6-0-1) ... 1624s Selecting previously unselected package r-cran-matrixmodels. 1624s Preparing to unpack .../332-r-cran-matrixmodels_0.5-3-1_all.deb ... 1624s Unpacking r-cran-matrixmodels (0.5-3-1) ... 1624s Selecting previously unselected package r-cran-rbibutils. 1624s Preparing to unpack .../333-r-cran-rbibutils_2.2.16-1_amd64.deb ... 1624s Unpacking r-cran-rbibutils (2.2.16-1) ... 1624s Selecting previously unselected package r-cran-rdpack. 1624s Preparing to unpack .../334-r-cran-rdpack_2.6-1_all.deb ... 1624s Unpacking r-cran-rdpack (2.6-1) ... 1624s Selecting previously unselected package r-cran-mnormt. 1624s Preparing to unpack .../335-r-cran-mnormt_2.1.1-2_amd64.deb ... 1624s Unpacking r-cran-mnormt (2.1.1-2) ... 1624s Selecting previously unselected package r-cran-sparsem. 1624s Preparing to unpack .../336-r-cran-sparsem_1.84-2-1_amd64.deb ... 1624s Unpacking r-cran-sparsem (1.84-2-1) ... 1624s Selecting previously unselected package r-cran-quantreg. 1624s Preparing to unpack .../337-r-cran-quantreg_5.98-1_amd64.deb ... 1624s Unpacking r-cran-quantreg (5.98-1) ... 1624s Selecting previously unselected package r-cran-sn. 1624s Preparing to unpack .../338-r-cran-sn_2.1.1-2_all.deb ... 1624s Unpacking r-cran-sn (2.1.1-2) ... 1625s Selecting previously unselected package r-cran-mvtnorm. 1625s Preparing to unpack .../339-r-cran-mvtnorm_1.2-5-1_amd64.deb ... 1625s Unpacking r-cran-mvtnorm (1.2-5-1) ... 1625s Selecting previously unselected package r-cran-tfisher. 1625s Preparing to unpack .../340-r-cran-tfisher_0.2.0-3_all.deb ... 1625s Unpacking r-cran-tfisher (0.2.0-3) ... 1625s Selecting previously unselected package r-cran-plotrix. 1625s Preparing to unpack .../341-r-cran-plotrix_3.8-4-1_all.deb ... 1625s Unpacking r-cran-plotrix (3.8-4-1) ... 1625s Selecting previously unselected package r-cran-th.data. 1625s Preparing to unpack .../342-r-cran-th.data_1.1-2-2_all.deb ... 1625s Unpacking r-cran-th.data (1.1-2-2) ... 1625s Selecting previously unselected package r-cran-sandwich. 1625s Preparing to unpack .../343-r-cran-sandwich_3.1-0-1_all.deb ... 1625s Unpacking r-cran-sandwich (3.1-0-1) ... 1625s Selecting previously unselected package r-cran-multcomp. 1625s Preparing to unpack .../344-r-cran-multcomp_1.4-26-2_all.deb ... 1625s Unpacking r-cran-multcomp (1.4-26-2) ... 1625s Selecting previously unselected package r-cran-mutoss. 1625s Preparing to unpack .../345-r-cran-mutoss_0.1-13-1_all.deb ... 1625s Unpacking r-cran-mutoss (0.1-13-1) ... 1625s Selecting previously unselected package r-cran-robustbase. 1625s Preparing to unpack .../346-r-cran-robustbase_0.99-3-1_amd64.deb ... 1625s Unpacking r-cran-robustbase (0.99-3-1) ... 1625s Selecting previously unselected package r-cran-qqconf. 1625s Preparing to unpack .../347-r-cran-qqconf_1.3.2+dfsg-1_amd64.deb ... 1625s Unpacking r-cran-qqconf (1.3.2+dfsg-1) ... 1625s Selecting previously unselected package r-cran-metap. 1625s Preparing to unpack .../348-r-cran-metap_1.9-1_all.deb ... 1625s Unpacking r-cran-metap (1.9-1) ... 1625s Selecting previously unselected package r-cran-plotly. 1625s Preparing to unpack .../349-r-cran-plotly_4.10.4+dfsg-2_all.deb ... 1625s Unpacking r-cran-plotly (4.10.4+dfsg-2) ... 1625s Selecting previously unselected package r-cran-segmented. 1625s Preparing to unpack .../350-r-cran-segmented_2.1-0-1_all.deb ... 1625s Unpacking r-cran-segmented (2.1-0-1) ... 1625s Selecting previously unselected package r-cran-mixtools. 1625s Preparing to unpack .../351-r-cran-mixtools_2.0.0-1_amd64.deb ... 1625s Unpacking r-cran-mixtools (2.0.0-1) ... 1626s Selecting previously unselected package r-cran-patchwork. 1626s Preparing to unpack .../352-r-cran-patchwork_1.2.0-1_all.deb ... 1626s Unpacking r-cran-patchwork (1.2.0-1) ... 1626s Selecting previously unselected package r-cran-pbapply. 1626s Preparing to unpack .../353-r-cran-pbapply_1.7-2-1_all.deb ... 1626s Unpacking r-cran-pbapply (1.7-2-1) ... 1626s Selecting previously unselected package r-cran-pkgbuild. 1626s Preparing to unpack .../354-r-cran-pkgbuild_1.4.4-1_all.deb ... 1626s Unpacking r-cran-pkgbuild (1.4.4-1) ... 1626s Selecting previously unselected package r-cran-pkgload. 1626s Preparing to unpack .../355-r-cran-pkgload_1.4.0-1_all.deb ... 1626s Unpacking r-cran-pkgload (1.4.0-1) ... 1626s Selecting previously unselected package r-cran-polyclip. 1626s Preparing to unpack .../356-r-cran-polyclip_1.10-6-1_amd64.deb ... 1626s Unpacking r-cran-polyclip (1.10-6-1) ... 1626s Selecting previously unselected package r-cran-praise. 1626s Preparing to unpack .../357-r-cran-praise_1.0.0-4build1_all.deb ... 1626s Unpacking r-cran-praise (1.0.0-4build1) ... 1626s Selecting previously unselected package r-cran-r.methodss3. 1626s Preparing to unpack .../358-r-cran-r.methodss3_1.8.2-1_all.deb ... 1626s Unpacking r-cran-r.methodss3 (1.8.2-1) ... 1626s Selecting previously unselected package r-cran-r.oo. 1626s Preparing to unpack .../359-r-cran-r.oo_1.26.0-1_all.deb ... 1626s Unpacking r-cran-r.oo (1.26.0-1) ... 1626s Selecting previously unselected package r-cran-r.utils. 1626s Preparing to unpack .../360-r-cran-r.utils_2.12.3-1_all.deb ... 1626s Unpacking r-cran-r.utils (2.12.3-1) ... 1626s Selecting previously unselected package r-cran-rann. 1626s Preparing to unpack .../361-r-cran-rann_2.6.1-1build2_amd64.deb ... 1626s Unpacking r-cran-rann (2.6.1-1build2) ... 1626s Selecting previously unselected package r-cran-rcppannoy. 1626s Preparing to unpack .../362-r-cran-rcppannoy_0.0.22-1_amd64.deb ... 1626s Unpacking r-cran-rcppannoy (0.0.22-1) ... 1626s Selecting previously unselected package r-cran-rcppeigen. 1626s Preparing to unpack .../363-r-cran-rcppeigen_0.3.4.0.0-1build1_amd64.deb ... 1626s Unpacking r-cran-rcppeigen (0.3.4.0.0-1build1) ... 1626s Selecting previously unselected package r-cran-rcpphnsw. 1626s Preparing to unpack .../364-r-cran-rcpphnsw_0.5.0+ds-1_amd64.deb ... 1626s Unpacking r-cran-rcpphnsw (0.5.0+ds-1) ... 1626s Selecting previously unselected package r-cran-rcppprogress. 1626s Preparing to unpack .../365-r-cran-rcppprogress_0.4.2-2build1_all.deb ... 1626s Unpacking r-cran-rcppprogress (0.4.2-2build1) ... 1627s Selecting previously unselected package r-cran-rematch2. 1627s Preparing to unpack .../366-r-cran-rematch2_2.1.2-2build1_all.deb ... 1627s Unpacking r-cran-rematch2 (2.1.2-2build1) ... 1627s Selecting previously unselected package r-cran-rocr. 1627s Preparing to unpack .../367-r-cran-rocr_1.0-11-3_all.deb ... 1627s Unpacking r-cran-rocr (1.0-11-3) ... 1627s Selecting previously unselected package r-cran-rspectra. 1627s Preparing to unpack .../368-r-cran-rspectra_0.16-1-1_amd64.deb ... 1627s Unpacking r-cran-rspectra (0.16-1-1) ... 1627s Selecting previously unselected package r-cran-rsvd. 1627s Preparing to unpack .../369-r-cran-rsvd_1.0.5-1_all.deb ... 1627s Unpacking r-cran-rsvd (1.0.5-1) ... 1627s Selecting previously unselected package r-cran-rtsne. 1627s Preparing to unpack .../370-r-cran-rtsne_0.17-1_amd64.deb ... 1627s Unpacking r-cran-rtsne (0.17-1) ... 1627s Selecting previously unselected package r-cran-scattermore. 1627s Preparing to unpack .../371-r-cran-scattermore_1.2-1_amd64.deb ... 1627s Unpacking r-cran-scattermore (1.2-1) ... 1627s Selecting previously unselected package r-cran-sctransform. 1627s Preparing to unpack .../372-r-cran-sctransform_0.4.1-1_amd64.deb ... 1627s Unpacking r-cran-sctransform (0.4.1-1) ... 1627s Selecting previously unselected package r-cran-sp. 1627s Preparing to unpack .../373-r-cran-sp_1%3a2.1-2+dfsg-1_amd64.deb ... 1627s Unpacking r-cran-sp (1:2.1-2+dfsg-1) ... 1627s Selecting previously unselected package r-cran-spam. 1627s Preparing to unpack .../374-r-cran-spam_2.10-0-1_amd64.deb ... 1627s Unpacking r-cran-spam (2.10-0-1) ... 1627s Selecting previously unselected package r-cran-seuratobject. 1627s Preparing to unpack .../375-r-cran-seuratobject_5.0.2-1_amd64.deb ... 1627s Unpacking r-cran-seuratobject (5.0.2-1) ... 1627s Selecting previously unselected package r-cran-spatstat.utils. 1627s Preparing to unpack .../376-r-cran-spatstat.utils_3.0-4-1_amd64.deb ... 1627s Unpacking r-cran-spatstat.utils (3.0-4-1) ... 1627s Selecting previously unselected package r-cran-spatstat.data. 1627s Preparing to unpack .../377-r-cran-spatstat.data_3.0-4-1_all.deb ... 1627s Unpacking r-cran-spatstat.data (3.0-4-1) ... 1627s Selecting previously unselected package r-cran-spatstat.geom. 1627s Preparing to unpack .../378-r-cran-spatstat.geom_3.2-9-2_amd64.deb ... 1627s Unpacking r-cran-spatstat.geom (3.2-9-2) ... 1627s Selecting previously unselected package r-cran-spatstat.random. 1627s Preparing to unpack .../379-r-cran-spatstat.random_3.2-3-1_amd64.deb ... 1627s Unpacking r-cran-spatstat.random (3.2-3-1) ... 1627s Selecting previously unselected package r-cran-tensor. 1627s Preparing to unpack .../380-r-cran-tensor_1.5-4_all.deb ... 1627s Unpacking r-cran-tensor (1.5-4) ... 1627s Selecting previously unselected package r-cran-spatstat.sparse. 1627s Preparing to unpack .../381-r-cran-spatstat.sparse_3.0-3-1_amd64.deb ... 1627s Unpacking r-cran-spatstat.sparse (3.0-3-1) ... 1627s Selecting previously unselected package r-cran-spatstat.explore. 1627s Preparing to unpack .../382-r-cran-spatstat.explore_3.2-7-1_amd64.deb ... 1627s Unpacking r-cran-spatstat.explore (3.2-7-1) ... 1628s Selecting previously unselected package r-cran-uwot. 1628s Preparing to unpack .../383-r-cran-uwot_0.1.16-2_amd64.deb ... 1628s Unpacking r-cran-uwot (0.1.16-2) ... 1628s Selecting previously unselected package r-cran-seurat. 1628s Preparing to unpack .../384-r-cran-seurat_5.1.0-1_amd64.deb ... 1628s Unpacking r-cran-seurat (5.1.0-1) ... 1628s Selecting previously unselected package r-cran-waldo. 1628s Preparing to unpack .../385-r-cran-waldo_0.5.2-1build1_all.deb ... 1628s Unpacking r-cran-waldo (0.5.2-1build1) ... 1628s Selecting previously unselected package r-cran-testthat. 1628s Preparing to unpack .../386-r-cran-testthat_3.2.1.1-1_amd64.deb ... 1628s Unpacking r-cran-testthat (3.2.1.1-1) ... 1628s Selecting previously unselected package r-cran-vgam. 1628s Preparing to unpack .../387-r-cran-vgam_1.1-9-1_amd64.deb ... 1628s Unpacking r-cran-vgam (1.1-9-1) ... 1628s Selecting previously unselected package autopkgtest-satdep. 1628s Preparing to unpack .../388-2-autopkgtest-satdep.deb ... 1628s Unpacking autopkgtest-satdep (0) ... 1628s Setting up libjs-json (0~20221030+~1.0.8-1) ... 1628s Setting up javascript-common (11+nmu1) ... 1628s Setting up libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 1628s Setting up libpixman-1-0:amd64 (0.42.2-1build1) ... 1628s Setting up libsharpyuv0:amd64 (1.4.0-0.1) ... 1628s Setting up libpaper1:amd64 (1.1.29build1) ... 1628s 1628s Creating config file /etc/papersize with new version 1628s Setting up libncurses-dev:amd64 (6.5-2) ... 1628s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 1628s Setting up liblerc4:amd64 (4.0.0+ds-4ubuntu2) ... 1628s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 1628s Setting up libxrender1:amd64 (1:0.9.10-1.1build1) ... 1628s Setting up libdatrie1:amd64 (0.2.13-3build1) ... 1628s Setting up libjs-popper.js (1.16.1+ds-6) ... 1628s Setting up libxcb-render0:amd64 (1.17.0-2) ... 1628s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 1628s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 1628s Setting up unzip (6.0-28ubuntu6) ... 1628s Setting up x11-common (1:7.7+23ubuntu3) ... 1629s Setting up node-html5shiv (3.7.3+dfsg-5) ... 1629s Setting up libdeflate0:amd64 (1.21-1) ... 1629s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 1629s Setting up libxcb-shm0:amd64 (1.17.0-2) ... 1629s Setting up libpaper-utils (1.1.29build1) ... 1629s Setting up libreadline-dev:amd64 (8.2-5) ... 1629s Setting up libgomp1:amd64 (14.2.0-7ubuntu1) ... 1629s Setting up libjs-modernizr (3.13.0-0.1) ... 1629s Setting up libjbig0:amd64 (2.1-6.1ubuntu2) ... 1629s Setting up libpcre2-16-0:amd64 (10.42-4ubuntu3) ... 1629s Setting up libjs-es5-shim (4.6.7-2) ... 1629s Setting up zip (3.0-14) ... 1629s Setting up libpcre2-32-0:amd64 (10.42-4ubuntu3) ... 1629s Setting up libblas3:amd64 (3.12.0-3build2) ... 1629s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 1629s Setting up libtirpc-dev:amd64 (1.3.4+ds-1.3) ... 1629s Setting up libpkgconf3:amd64 (1.8.1-3ubuntu1) ... 1629s Setting up libquadmath0:amd64 (14.2.0-7ubuntu1) ... 1629s Setting up libjs-d3 (3.5.17-4) ... 1629s Setting up fonts-dejavu-mono (2.37-8) ... 1629s Setting up libmpc3:amd64 (1.3.1-1build2) ... 1629s Setting up libtcl8.6:amd64 (8.6.14+dfsg-1build1) ... 1629s Setting up icu-devtools (74.2-1ubuntu4) ... 1629s Setting up fonts-dejavu-core (2.37-8) ... 1629s Setting up pkgconf-bin (1.8.1-3ubuntu1) ... 1629s Setting up libjpeg-turbo8:amd64 (2.1.5-2ubuntu2) ... 1629s Setting up libltdl7:amd64 (2.4.7-7build1) ... 1629s Setting up libfftw3-double3:amd64 (3.3.10-1ubuntu4) ... 1629s Setting up libgfortran5:amd64 (14.2.0-7ubuntu1) ... 1629s Setting up libwebp7:amd64 (1.4.0-0.1) ... 1629s Setting up liblzma-dev:amd64 (5.6.2-2) ... 1629s Setting up libubsan1:amd64 (14.2.0-7ubuntu1) ... 1629s Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 1629s Setting up libpcre2-posix3:amd64 (10.42-4ubuntu3) ... 1629s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... 1629s Setting up libhwasan0:amd64 (14.2.0-7ubuntu1) ... 1629s Setting up libasan8:amd64 (14.2.0-7ubuntu1) ... 1629s Setting up libsuitesparseconfig7:amd64 (1:7.8.0+dfsg-1) ... 1629s Setting up liblua5.4-0:amd64 (5.4.6-3build2) ... 1629s Setting up libharfbuzz0b:amd64 (9.0.0-1) ... 1629s Setting up libthai-data (0.1.29-2build1) ... 1629s Setting up node-bootstrap-sass (3.4.3-2) ... 1629s Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... 1629s Setting up libxss1:amd64 (1:1.2.3-1build3) ... 1629s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... 1629s Setting up pandoc-data (3.1.11.1-3) ... 1629s Setting up libtsan2:amd64 (14.2.0-7ubuntu1) ... 1629s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 1629s Setting up libisl23:amd64 (0.27-1) ... 1629s Setting up libdeflate-dev:amd64 (1.21-1) ... 1629s Setting up node-normalize.css (8.0.1-5) ... 1629s Setting up libicu-dev:amd64 (74.2-1ubuntu4) ... 1629s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 1629s Setting up xdg-utils (1.2.1-0ubuntu1) ... 1629s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 1629s Setting up libcc1-0:amd64 (14.2.0-7ubuntu1) ... 1629s Setting up liblsan0:amd64 (14.2.0-7ubuntu1) ... 1629s Setting up libblas-dev:amd64 (3.12.0-3build2) ... 1629s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode 1629s Setting up dctrl-tools (2.24-3build3) ... 1629s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 1629s Setting up libitm1:amd64 (14.2.0-7ubuntu1) ... 1629s Setting up libbz2-dev:amd64 (1.0.8-6) ... 1629s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 1629s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 1629s Setting up libice6:amd64 (2:1.0.10-1build3) ... 1629s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-2ubuntu2) ... 1629s Setting up liblapack3:amd64 (3.12.0-3build2) ... 1629s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 1629s Setting up libamd3:amd64 (1:7.8.0+dfsg-1) ... 1629s Setting up libpcre2-dev:amd64 (10.42-4ubuntu3) ... 1629s Setting up libcolamd3:amd64 (1:7.8.0+dfsg-1) ... 1629s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 1629s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 1629s Setting up libpng-dev:amd64 (1.6.44-1) ... 1629s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 1629s Setting up pkgconf:amd64 (1.8.1-3ubuntu1) ... 1629s Setting up libthai0:amd64 (0.1.29-2build1) ... 1629s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 1629s Setting up pandoc (3.1.11.1+ds-2) ... 1629s Setting up libglpk40:amd64 (5.0-1build2) ... 1629s Setting up liblapack-dev:amd64 (3.12.0-3build2) ... 1629s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode 1629s Setting up cpp-14-x86-64-linux-gnu (14.2.0-7ubuntu1) ... 1629s Setting up cpp-14 (14.2.0-7ubuntu1) ... 1629s Setting up libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 1629s Setting up libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ... 1629s Setting up libgcc-14-dev:amd64 (14.2.0-7ubuntu1) ... 1629s Setting up libjpeg8-dev:amd64 (8c-2ubuntu11) ... 1629s Setting up libstdc++-14-dev:amd64 (14.2.0-7ubuntu1) ... 1629s Setting up libsm6:amd64 (2:1.2.3-1build3) ... 1629s Setting up cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 1629s Setting up libgfortran-14-dev:amd64 (14.2.0-7ubuntu1) ... 1629s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 1631s Regenerating fonts cache... done. 1631s Setting up libxft2:amd64 (2.3.6-1build1) ... 1631s Setting up libboost1.83-dev:amd64 (1.83.0-3.2ubuntu2) ... 1631s Setting up libtk8.6:amd64 (8.6.14-1build1) ... 1631s Setting up libpango-1.0-0:amd64 (1.54.0+ds-2) ... 1631s Setting up libjpeg-dev:amd64 (8c-2ubuntu11) ... 1631s Setting up libcairo2:amd64 (1.18.2-2) ... 1631s Setting up libxt6t64:amd64 (1:1.2.1-1.2build1) ... 1631s Setting up cpp (4:14.1.0-2ubuntu1) ... 1631s Setting up libboost-dev:amd64 (1.83.0.2ubuntu1) ... 1631s Setting up gcc-14-x86-64-linux-gnu (14.2.0-7ubuntu1) ... 1631s Setting up libpangoft2-1.0-0:amd64 (1.54.0+ds-2) ... 1631s Setting up libpangocairo-1.0-0:amd64 (1.54.0+ds-2) ... 1631s Setting up gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 1631s Setting up gcc-14 (14.2.0-7ubuntu1) ... 1631s Setting up gfortran-14-x86-64-linux-gnu (14.2.0-7ubuntu1) ... 1631s Setting up r-base-core (4.4.1-1) ... 1631s 1631s Creating config file /etc/R/Renviron with new version 1632s Setting up r-cran-crayon (1.5.2-1) ... 1632s Setting up r-cran-squarem (2021.1-1) ... 1632s Setting up r-cran-labeling (0.4.3-1) ... 1632s Setting up r-cran-rcppprogress (0.4.2-2build1) ... 1632s Setting up r-cran-sourcetools (0.1.7-1-1) ... 1632s Setting up r-cran-futile.options (1.0.1-3build1) ... 1632s Setting up r-cran-lattice (0.22-6-1) ... 1632s Setting up r-cran-ps (1.7.6-1) ... 1632s Setting up r-cran-nlme (3.1.166-1) ... 1632s Setting up r-cran-farver (2.1.2-1) ... 1632s Setting up g++-14-x86-64-linux-gnu (14.2.0-7ubuntu1) ... 1632s Setting up r-cran-formatr (1.14-2) ... 1632s Setting up r-cran-pbapply (1.7-2-1) ... 1632s Setting up r-cran-xml (3.99-0.17-1) ... 1632s Setting up r-cran-spatstat.utils (3.0-4-1) ... 1632s Setting up r-cran-viridislite (0.4.2-2) ... 1632s Setting up r-cran-locfit (1.5-9.9-1) ... 1632s Setting up r-cran-cluster (2.1.6-1build1) ... 1632s Setting up r-cran-sparsem (1.84-2-1) ... 1632s Setting up r-cran-statmod (1.5.0-1) ... 1632s Setting up g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 1632s Setting up r-cran-nnet (7.3-19-2build1) ... 1632s Setting up r-cran-tensor (1.5-4) ... 1632s Setting up r-cran-lazyeval (0.2.2-1build1) ... 1632s Setting up r-cran-commonmark (1.9.1-1) ... 1632s Setting up g++-14 (14.2.0-7ubuntu1) ... 1632s Setting up r-cran-proxy (0.4-27-1) ... 1632s Setting up r-cran-r6 (2.5.1-1) ... 1632s Setting up r-cran-pkgkitten (0.2.4-1) ... 1632s Setting up gfortran-14 (14.2.0-7ubuntu1) ... 1632s Setting up r-cran-numderiv (2016.8-1.1-3) ... 1632s Setting up r-cran-magrittr (2.0.3-1) ... 1632s Setting up r-cran-rappdirs (0.3.3-1) ... 1632s Setting up r-bioc-genomeinfodbdata (1.2.12-1) ... 1632s Setting up r-cran-littler (0.3.20-1) ... 1632s Setting up r-cran-bh (1.84.0-1) ... 1632s Setting up r-cran-fs (1.6.4+dfsg-1) ... 1632s Setting up r-cran-rcpp (1.0.13-1) ... 1632s Setting up r-cran-curl (5.2.1+dfsg-1) ... 1632s Setting up r-cran-codetools (0.2-20-1) ... 1632s Setting up r-cran-brio (1.1.5-1) ... 1632s Setting up r-cran-diffobj (0.3.5-1) ... 1632s Setting up r-bioc-biocgenerics (0.50.0-2) ... 1632s Setting up r-cran-rlang (1.1.4-1) ... 1632s Setting up r-cran-matrixstats (1.3.0-1) ... 1632s Setting up r-cran-listenv (0.9.1+dfsg-1) ... 1632s Setting up littler (0.3.20-1) ... 1632s Setting up r-bioc-matrixgenerics (1.16.0-2) ... 1632s Setting up r-cran-xfun (0.45+dfsg-1) ... 1632s Setting up r-cran-vgam (1.1-9-1) ... 1632s Setting up r-cran-rcpphnsw (0.5.0+ds-1) ... 1632s Setting up r-cran-sys (3.4.2-1) ... 1632s Setting up r-cran-deoptimr (1.1-3-1) ... 1632s Setting up r-cran-withr (3.0.0+dfsg-1) ... 1632s Setting up r-cran-mathjaxr (1.6-0-1) ... 1632s Setting up r-cran-processx (3.8.4-1) ... 1632s Setting up r-cran-mime (0.12-2) ... 1632s Setting up r-cran-praise (1.0.0-4build1) ... 1632s Setting up r-cran-generics (0.1.3-1) ... 1632s Setting up r-cran-base64enc (0.1-3-3) ... 1632s Setting up r-cran-iterators (1.0.14-1) ... 1632s Setting up r-cran-abind (1.4-5-2) ... 1632s Setting up r-cran-digest (0.6.36-1) ... 1632s Setting up r-cran-ape (5.8-1) ... 1632s Setting up r-cran-yaml (2.3.8-2) ... 1632s Setting up r-cran-ica (1.0-3-1) ... 1632s Setting up r-cran-lambda.r (1.2.4-2build1) ... 1632s Setting up r-cran-rann (2.6.1-1build2) ... 1632s Setting up r-cran-gower (1.0.1-1) ... 1632s Setting up r-cran-evaluate (0.24.0-1) ... 1632s Setting up r-cran-timedate (4032.109-1) ... 1632s Setting up r-cran-highr (0.11+dfsg-1) ... 1632s Setting up r-cran-foreach (1.5.2-1) ... 1632s Setting up r-cran-fansi (1.0.5-1) ... 1632s Setting up r-cran-mass (7.3-61-1) ... 1632s Setting up r-cran-snow (1:0.4.4-2) ... 1632s Setting up r-cran-gtools (3.9.5-1) ... 1632s Setting up r-cran-kernlab (0.9-33-1) ... 1632s Setting up r-cran-data.table (1.15.4+dfsg-2.2) ... 1632s Setting up r-cran-glue (1.7.0-1) ... 1632s Setting up gfortran-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 1632s Setting up r-cran-xtable (1:1.8-4-2) ... 1632s Setting up r-cran-polyclip (1.10-6-1) ... 1632s Setting up r-cran-cli (3.6.2-1) ... 1632s Setting up r-cran-rbibutils (2.2.16-1) ... 1632s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 1632s Setting up r-cran-dotcall64 (1.1-1-1) ... 1632s Setting up r-cran-bitops (1.0-7-1) ... 1632s Setting up r-cran-rprojroot (2.0.4-1) ... 1632s Setting up r-cran-fnn (1.1.4-1) ... 1632s Setting up gcc (4:14.1.0-2ubuntu1) ... 1632s Setting up r-cran-progressr (0.14.0-1) ... 1632s Setting up r-bioc-zlibbioc (1.50.0+dfsg-2) ... 1632s Setting up r-cran-deldir (2.0-4-1build1) ... 1632s Setting up r-cran-goftest (1.2-3-1) ... 1632s Setting up r-cran-shape (1.4.6-1) ... 1632s Setting up r-cran-askpass (1.2.0-1) ... 1632s Setting up r-cran-fastmap (1.1.1-1) ... 1632s Setting up r-cran-png (0.1-8-1build2) ... 1632s Setting up r-cran-r.methodss3 (1.8.2-1) ... 1632s Setting up r-bioc-biobase (2.64.0-4) ... 1632s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 1632s Setting up r-cran-mnormt (2.1.1-2) ... 1632s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 1632s Setting up r-cran-sp (1:2.1-2+dfsg-1) ... 1632s Setting up r-cran-utf8 (1.2.4-1) ... 1632s Setting up r-cran-colorspace (2.1-0+dfsg-1) ... 1632s Setting up r-cran-parallelly (1.37.1-1build1) ... 1632s Setting up r-cran-stringi (1.8.3-1) ... 1632s Setting up r-cran-plotrix (3.8-4-1) ... 1632s Setting up r-cran-cpp11 (0.4.7-1) ... 1632s Setting up r-cran-mvtnorm (1.2-5-1) ... 1632s Setting up r-cran-sitmo (2.0.2-1) ... 1632s Setting up r-cran-segmented (2.1-0-1) ... 1632s Setting up r-cran-plyr (1.8.9-1) ... 1632s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 1632s Setting up r-bioc-s4vectors (0.42.1+dfsg-2) ... 1632s Setting up r-cran-isoband (0.2.7-1) ... 1632s Setting up r-cran-futile.logger (1.4.3-4build1) ... 1632s Setting up r-cran-diagram (1.6.5-2) ... 1632s Setting up r-bioc-limma (3.60.4+dfsg-1) ... 1632s Setting up r-cran-gtable (0.3.5+dfsg-1) ... 1632s Setting up r-cran-zoo (1.8-12-2) ... 1632s Setting up r-cran-later (1.3.2+dfsg-1) ... 1632s Setting up r-cran-matrix (1.7-0-3) ... 1632s Setting up r-cran-spatstat.sparse (3.0-3-1) ... 1632s Setting up r-cran-here (1.0.1-2) ... 1632s Setting up r-cran-htmltools (0.5.8.1-1) ... 1632s Setting up r-cran-tinytex (0.51-1) ... 1632s Setting up r-cran-irlba (2.3.5.1-4) ... 1632s Setting up r-cran-kernsmooth (2.23-24-1) ... 1632s Setting up r-cran-knitr (1.47+dfsg-1) ... 1632s Setting up r-cran-rcpptoml (0.2.2+dfsg-1) ... 1632s Setting up r-cran-mgcv (1.9-1-1) ... 1632s Setting up g++ (4:14.1.0-2ubuntu1) ... 1632s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 1632s Setting up r-cran-robustbase (0.99-3-1) ... 1632s Setting up r-cran-cachem (1.0.8-1) ... 1632s Setting up r-cran-lmtest (0.9.40-1) ... 1632s Setting up r-cran-sass (0.4.9+dfsg-1) ... 1632s Setting up build-essential (12.10ubuntu1) ... 1632s Setting up r-cran-catools (1.18.2-1) ... 1632s Setting up r-cran-rtsne (0.17-1) ... 1632s Setting up r-cran-rcpparmadillo (14.0.0-1-1) ... 1632s Setting up r-bioc-iranges (2.38.1-1) ... 1632s Setting up r-cran-dqrng (0.3.2+dfsg-1) ... 1632s Setting up r-cran-rjson (0.2.21-1) ... 1632s Setting up r-cran-tzdb (0.4.0-2) ... 1632s Setting up r-cran-reticulate (1.35.0+dfsg-1) ... 1632s Setting up r-cran-globals (0.16.3-1) ... 1632s Setting up r-cran-rcurl (1.98-1.14+dfsg-1build2) ... 1632s Setting up r-cran-spam (2.10-0-1) ... 1632s Setting up r-cran-restfulr (0.0.15-1) ... 1632s Setting up r-cran-gdata (3.0.1-1) ... 1632s Setting up r-cran-vctrs (0.6.5-1) ... 1632s Setting up r-cran-rcppeigen (0.3.4.0.0-1build1) ... 1632s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 1632s Setting up r-cran-ellipsis (0.3.2-2) ... 1632s Setting up r-cran-rcppannoy (0.0.22-1) ... 1632s Setting up r-cran-openssl (2.2.0+dfsg-1) ... 1632s Setting up r-bioc-s4arrays (1.4.1+dfsg-1) ... 1632s Setting up r-cran-stringr (1.5.1-1) ... 1632s Setting up r-cran-class (7.3-22-2build1) ... 1632s Setting up r-bioc-biocparallel (1.38.0-2) ... 1632s Setting up r-cran-modelmetrics (1.2.2.2-1build1) ... 1632s Setting up r-cran-callr (3.7.6-1) ... 1632s Setting up r-cran-matrixmodels (0.5-3-1) ... 1632s Setting up r-bioc-rhtslib (3.0.0+dfsg-1) ... 1632s Setting up r-cran-desc (1.4.3-1) ... 1632s Setting up r-cran-munsell (0.5.1-1) ... 1632s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 1632s Setting up r-cran-clock (0.7.0-1.1) ... 1632s Setting up r-cran-sandwich (3.1-0-1) ... 1632s Setting up r-cran-proc (1.18.5-1) ... 1632s Setting up r-cran-fontawesome (0.5.2-1) ... 1632s Setting up r-cran-survival (3.7-0-1) ... 1632s Setting up r-cran-igraph (2.0.3-1) ... 1632s Setting up r-bioc-biocio (1.14.0+dfsg-1) ... 1632s Setting up r-cran-r.oo (1.26.0-1) ... 1632s Setting up r-cran-rdpack (2.6-1) ... 1632s Setting up r-cran-future (1.33.1+dfsg-1) ... 1632s Setting up gfortran (4:14.1.0-2ubuntu1) ... 1632s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 1632s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 1632s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 1632s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 1632s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 1632s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... 1632s Setting up r-cran-reshape2 (1.4.4-2build1) ... 1632s Setting up r-cran-rsvd (1.0.5-1) ... 1632s Setting up r-cran-future.apply (1.11.2+dfsg-1) ... 1632s Setting up r-cran-timechange (0.3.0-1) ... 1632s Setting up r-cran-th.data (1.1-2-2) ... 1632s Setting up r-cran-httr (1.4.7+dfsg-1) ... 1632s Setting up r-cran-gridextra (2.3-3build1) ... 1632s Setting up r-cran-scales (1.3.0-1) ... 1632s Setting up r-cran-memoise (2.0.1-1) ... 1632s Setting up r-cran-lava (1.7.3+dfsg-1) ... 1632s Setting up r-cran-promises (1.3.0+dfsg-1) ... 1632s Setting up r-cran-purrr (1.0.2-1) ... 1632s Setting up r-cran-e1071 (1.7-14-1) ... 1632s Setting up r-cran-spatstat.data (3.0-4-1) ... 1632s Setting up r-cran-fastdummies (1.7.3-2) ... 1632s Setting up r-cran-multcomp (1.4-26-2) ... 1632s Setting up r-cran-qqconf (1.3.2+dfsg-1) ... 1632s Setting up r-cran-seuratobject (5.0.2-1) ... 1632s Setting up r-cran-spatstat.geom (3.2-9-2) ... 1632s Setting up r-bioc-xvector (0.44.0-1) ... 1632s Setting up r-cran-pkgbuild (1.4.4-1) ... 1632s Setting up r-cran-hardhat (1.4.0+dfsg-1) ... 1632s Setting up r-cran-dplyr (1.1.4-1) ... 1632s Setting up r-cran-rspectra (0.16-1-1) ... 1632s Setting up r-cran-gplots (3.2.0-1) ... 1632s Setting up r-cran-uwot (0.1.16-2) ... 1632s Setting up r-cran-leiden (0.4.3.1+dfsg-1) ... 1632s Setting up r-bioc-multtest (2.60.0-1) ... 1632s Setting up r-cran-lubridate (1.9.3+dfsg-1) ... 1632s Setting up r-cran-pkgload (1.4.0-1) ... 1632s Setting up r-cran-r.utils (2.12.3-1) ... 1632s Setting up r-cran-rocr (1.0-11-3) ... 1632s Setting up r-base-dev (4.4.1-1) ... 1632s Setting up r-cran-prodlim (2024.06.25-1) ... 1632s Setting up r-cran-fitdistrplus (1.1-11-1) ... 1632s Setting up r-bioc-ucsc.utils (1.0.0+ds-2) ... 1632s Setting up r-bioc-sparsearray (1.4.8+dfsg-1) ... 1632s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 1632s Setting up r-cran-scattermore (1.2-1) ... 1632s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 1632s Setting up r-cran-rematch2 (2.1.2-2build1) ... 1632s Setting up r-cran-rpart (4.1.23-1build1) ... 1632s Setting up r-cran-spatstat.random (3.2-3-1) ... 1632s Setting up r-cran-ipred (0.9-14-1) ... 1632s Setting up r-bioc-genomeinfodb (1.40.1+dfsg-1) ... 1632s Setting up r-cran-bslib (0.7.0+dfsg-1) ... 1632s Setting up r-cran-spatstat.explore (3.2-7-1) ... 1632s Setting up r-cran-waldo (0.5.2-1build1) ... 1632s Setting up r-cran-ggrepel (0.9.5-2) ... 1632s Setting up r-cran-tidyr (1.3.1-1) ... 1632s Setting up r-cran-recipes (1.0.10+dfsg-2) ... 1632s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 1632s Setting up r-cran-mutoss (0.1-13-1) ... 1632s Setting up r-cran-ggridges (0.5.6-1) ... 1632s Setting up r-bioc-delayedarray (0.30.1+dfsg-1) ... 1632s Setting up r-cran-cowplot (1.1.3+dfsg-1) ... 1632s Setting up r-cran-sctransform (0.4.1-1) ... 1632s Setting up r-cran-patchwork (1.2.0-1) ... 1632s Setting up r-bioc-genomicranges (1.56.1+dfsg-1) ... 1632s Setting up r-bioc-biostrings (2.72.1+dfsg-1) ... 1632s Setting up r-cran-caret (6.0-94+dfsg-1) ... 1632s Setting up r-cran-shiny (1.8.1.1+dfsg-1) ... 1632s Setting up r-cran-shinyjs (2.1.0-1) ... 1632s Setting up r-cran-testthat (3.2.1.1-1) ... 1632s Setting up r-cran-miniui (0.1.1.1-3build1) ... 1632s Setting up r-cran-rmarkdown (2.27+dfsg-1) ... 1632s Setting up r-cran-conquer (1.3.3-1) ... 1632s Setting up r-bioc-rsamtools (2.20.0+dfsg-1) ... 1632s Setting up r-cran-crosstalk (1.2.1+dfsg-1) ... 1632s Setting up r-bioc-summarizedexperiment (1.34.0+dfsg-1) ... 1632s Setting up r-cran-quantreg (5.98-1) ... 1632s Setting up r-cran-sn (2.1.1-2) ... 1632s Setting up r-bioc-deseq2 (1.44.0+dfsg-1) ... 1632s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 1632s Setting up r-cran-colourpicker (1.3.0+dfsg-1) ... 1632s Setting up r-cran-tfisher (0.2.0-3) ... 1632s Setting up r-bioc-genomicalignments (1.40.0-1) ... 1632s Setting up r-cran-metap (1.9-1) ... 1632s Setting up r-bioc-rtracklayer (1.64.0-1) ... 1632s Setting up r-cran-plotly (4.10.4+dfsg-2) ... 1632s Setting up r-cran-mixtools (2.0.0-1) ... 1632s Setting up r-cran-seurat (5.1.0-1) ... 1632s Setting up autopkgtest-satdep (0) ... 1632s Processing triggers for man-db (2.12.1-3) ... 1634s Processing triggers for install-info (7.1.1-1) ... 1634s Processing triggers for libc-bin (2.40-1ubuntu3) ... 1649s (Reading database ... 125713 files and directories currently installed.) 1649s Removing autopkgtest-satdep (0) ... 1649s autopkgtest [16:13:21]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 1649s autopkgtest [16:13:21]: test pkg-r-autopkgtest: [----------------------- 1649s Test: Try to load the R library Seurat 1649s 1649s R version 4.4.1 (2024-06-14) -- "Race for Your Life" 1649s Copyright (C) 2024 The R Foundation for Statistical Computing 1649s Platform: x86_64-pc-linux-gnu 1649s 1649s R is free software and comes with ABSOLUTELY NO WARRANTY. 1649s You are welcome to redistribute it under certain conditions. 1649s Type 'license()' or 'licence()' for distribution details. 1649s 1649s R is a collaborative project with many contributors. 1649s Type 'contributors()' for more information and 1649s 'citation()' on how to cite R or R packages in publications. 1649s 1649s Type 'demo()' for some demos, 'help()' for on-line help, or 1649s 'help.start()' for an HTML browser interface to help. 1649s Type 'q()' to quit R. 1649s 1650s > library('Seurat') 1650s Loading required package: SeuratObject 1650s Loading required package: sp 1652s 1652s Attaching package: ‘SeuratObject’ 1652s 1652s The following objects are masked from ‘package:base’: 1652s 1652s intersect, t 1652s 1654s > 1654s > 1654s Other tests are currently unsupported! 1654s They will be progressively added. 1654s autopkgtest [16:13:26]: test pkg-r-autopkgtest: -----------------------] 1655s pkg-r-autopkgtest PASS 1655s autopkgtest [16:13:27]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 1655s autopkgtest [16:13:27]: @@@@@@@@@@@@@@@@@@@@ summary 1655s run-unit-test PASS 1655s pkg-r-autopkgtest PASS 1664s nova [W] Skipping flock for amd64 1664s Creating nova instance adt-plucky-amd64-r-cran-seurat-20241103-143120-juju-7f2275-prod-proposed-migration-environment-14-83576774-72ec-4293-a670-ee8f5345e0d6 from image adt/ubuntu-plucky-amd64-server-20241103.img (UUID 35ab818c-a1b8-49b0-b1ec-61e6c5b42b5f)... 1664s nova [W] Skipping flock for amd64 1664s Creating nova instance adt-plucky-amd64-r-cran-seurat-20241103-143120-juju-7f2275-prod-proposed-migration-environment-14-83576774-72ec-4293-a670-ee8f5345e0d6 from image adt/ubuntu-plucky-amd64-server-20241103.img (UUID 35ab818c-a1b8-49b0-b1ec-61e6c5b42b5f)...