0s autopkgtest [20:49:19]: starting date and time: 2024-11-23 20:49:19+0000 0s autopkgtest [20:49:19]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [20:49:19]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.8pvfx0y7/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-sf --apt-upgrade r-cran-lwgeom --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-sf/1.0-17+dfsg-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-28.secgroup --name adt-plucky-amd64-r-cran-lwgeom-20241123-204919-juju-7f2275-prod-proposed-migration-environment-15-6fc6f9b0-de8e-4d84-8ce8-99db7b7908cf --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 42s autopkgtest [20:50:01]: testbed dpkg architecture: amd64 42s autopkgtest [20:50:01]: testbed apt version: 2.9.8 42s autopkgtest [20:50:01]: @@@@@@@@@@@@@@@@@@@@ test bed setup 43s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 43s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [53.2 kB] 43s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [13.6 kB] 43s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9704 B] 43s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [925 kB] 44s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [41.5 kB] 44s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [89.4 kB] 44s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted i386 Packages [2408 B] 44s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [40.1 kB] 44s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [290 kB] 44s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [800 kB] 44s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [20.0 kB] 44s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [5528 B] 44s Fetched 2364 kB in 1s (2858 kB/s) 44s Reading package lists... 46s Reading package lists... 46s Building dependency tree... 46s Reading state information... 46s Calculating upgrade... 46s The following package was automatically installed and is no longer required: 46s libsgutils2-1.46-2 46s Use 'sudo apt autoremove' to remove it. 47s The following NEW packages will be installed: 47s libsgutils2-1.48 47s The following packages will be upgraded: 47s amd64-microcode bash bpftrace curl debconf debconf-i18n distro-info 47s dracut-install fwupd-signed gir1.2-girepository-2.0 gir1.2-glib-2.0 hostname 47s intel-microcode libaudit-common libaudit1 libcurl3t64-gnutls libcurl4t64 47s libgirepository-1.0-1 libglib2.0-0t64 libglib2.0-data libpam-modules 47s libpam-modules-bin libpam-runtime libpam0g libplymouth5 libselinux1 47s libsemanage-common libsemanage2 linux-base lxd-installer openssh-client 47s openssh-server openssh-sftp-server pinentry-curses plymouth 47s plymouth-theme-ubuntu-text python3-blinker python3-dbus python3-debconf 47s python3-gi python3-jsonschema-specifications python3-rpds-py python3-yaml 47s sg3-utils sg3-utils-udev vim-common vim-tiny xxd 47s 48 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 47s Need to get 19.9 MB of archives. 47s After this operation, 4454 kB of additional disk space will be used. 47s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 bash amd64 5.2.32-1ubuntu2 [918 kB] 47s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 hostname amd64 3.25 [11.1 kB] 47s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit-common all 1:4.0.2-2ubuntu1 [6578 B] 47s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit1 amd64 1:4.0.2-2ubuntu1 [53.9 kB] 47s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 debconf-i18n all 1.5.87ubuntu1 [204 kB] 47s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-debconf all 1.5.87ubuntu1 [4156 B] 47s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 debconf all 1.5.87ubuntu1 [124 kB] 47s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam0g amd64 1.5.3-7ubuntu4 [69.6 kB] 47s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libselinux1 amd64 3.7-3ubuntu1 [86.9 kB] 47s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-modules-bin amd64 1.5.3-7ubuntu4 [53.7 kB] 47s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-modules amd64 1.5.3-7ubuntu4 [294 kB] 47s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-sftp-server amd64 1:9.9p1-3ubuntu2 [41.2 kB] 47s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-server amd64 1:9.9p1-3ubuntu2 [625 kB] 47s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-client amd64 1:9.9p1-3ubuntu2 [1080 kB] 47s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-runtime all 1.5.3-7ubuntu4 [40.8 kB] 47s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage-common all 3.7-2build1 [7186 B] 47s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage2 amd64 3.7-2build1 [105 kB] 47s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 distro-info amd64 1.12 [20.0 kB] 47s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-girepository-2.0 amd64 1.82.0-2 [25.3 kB] 47s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-glib-2.0 amd64 2.82.2-3 [182 kB] 47s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-0t64 amd64 2.82.2-3 [1655 kB] 47s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libgirepository-1.0-1 amd64 1.82.0-2 [88.7 kB] 47s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-data all 2.82.2-3 [51.7 kB] 47s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dbus amd64 1.3.2-5build4 [110 kB] 47s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-3build1 [293 kB] 47s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-yaml amd64 6.0.2-1build1 [187 kB] 47s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 vim-tiny amd64 2:9.1.0861-1ubuntu1 [1037 kB] 47s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 vim-common all 2:9.1.0861-1ubuntu1 [395 kB] 48s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 xxd amd64 2:9.1.0861-1ubuntu1 [67.8 kB] 48s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libplymouth5 amd64 24.004.60-2ubuntu3 [145 kB] 48s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 plymouth-theme-ubuntu-text amd64 24.004.60-2ubuntu3 [10.3 kB] 48s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 plymouth amd64 24.004.60-2ubuntu3 [140 kB] 48s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 bpftrace amd64 0.21.2-2ubuntu3 [1787 kB] 48s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 curl amd64 8.9.1-2ubuntu3 [243 kB] 48s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4t64 amd64 8.9.1-2ubuntu3 [420 kB] 48s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 dracut-install amd64 105-2ubuntu2 [35.9 kB] 48s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 fwupd-signed amd64 1.55+1.7-1 [30.6 kB] 48s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl3t64-gnutls amd64 8.9.1-2ubuntu3 [412 kB] 48s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libsgutils2-1.48 amd64 1.48-0ubuntu1 [124 kB] 48s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-base all 4.10.1ubuntu1 [34.8 kB] 48s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 lxd-installer all 10 [5264 B] 48s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 pinentry-curses amd64 1.3.1-0ubuntu2 [41.6 kB] 48s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-blinker all 1.9.0-1 [10.7 kB] 48s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-rpds-py amd64 0.21.0-2ubuntu1 [323 kB] 48s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jsonschema-specifications all 2023.12.1-2 [9116 B] 48s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 sg3-utils amd64 1.48-0ubuntu1 [1042 kB] 48s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 sg3-utils-udev all 1.48-0ubuntu1 [6608 B] 48s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 amd64-microcode amd64 3.20240820.1ubuntu1 [187 kB] 48s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 intel-microcode amd64 3.20241112.1ubuntu2 [7055 kB] 48s Preconfiguring packages ... 48s Fetched 19.9 MB in 1s (13.9 MB/s) 49s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75620 files and directories currently installed.) 49s Preparing to unpack .../bash_5.2.32-1ubuntu2_amd64.deb ... 49s Unpacking bash (5.2.32-1ubuntu2) over (5.2.32-1ubuntu1) ... 49s Setting up bash (5.2.32-1ubuntu2) ... 49s update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode 49s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75620 files and directories currently installed.) 49s Preparing to unpack .../hostname_3.25_amd64.deb ... 49s Unpacking hostname (3.25) over (3.23+nmu2ubuntu2) ... 49s Setting up hostname (3.25) ... 49s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75620 files and directories currently installed.) 49s Preparing to unpack .../libaudit-common_1%3a4.0.2-2ubuntu1_all.deb ... 49s Unpacking libaudit-common (1:4.0.2-2ubuntu1) over (1:4.0.1-1ubuntu2) ... 49s Setting up libaudit-common (1:4.0.2-2ubuntu1) ... 49s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75620 files and directories currently installed.) 49s Preparing to unpack .../libaudit1_1%3a4.0.2-2ubuntu1_amd64.deb ... 49s Unpacking libaudit1:amd64 (1:4.0.2-2ubuntu1) over (1:4.0.1-1ubuntu2) ... 49s Setting up libaudit1:amd64 (1:4.0.2-2ubuntu1) ... 49s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75620 files and directories currently installed.) 49s Preparing to unpack .../debconf-i18n_1.5.87ubuntu1_all.deb ... 49s Unpacking debconf-i18n (1.5.87ubuntu1) over (1.5.86ubuntu1) ... 49s Preparing to unpack .../python3-debconf_1.5.87ubuntu1_all.deb ... 49s Unpacking python3-debconf (1.5.87ubuntu1) over (1.5.86ubuntu1) ... 49s Preparing to unpack .../debconf_1.5.87ubuntu1_all.deb ... 49s Unpacking debconf (1.5.87ubuntu1) over (1.5.86ubuntu1) ... 49s Setting up debconf (1.5.87ubuntu1) ... 49s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75620 files and directories currently installed.) 49s Preparing to unpack .../libpam0g_1.5.3-7ubuntu4_amd64.deb ... 49s Unpacking libpam0g:amd64 (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ... 49s Setting up libpam0g:amd64 (1.5.3-7ubuntu4) ... 49s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75620 files and directories currently installed.) 49s Preparing to unpack .../libselinux1_3.7-3ubuntu1_amd64.deb ... 49s Unpacking libselinux1:amd64 (3.7-3ubuntu1) over (3.5-2ubuntu5) ... 49s Setting up libselinux1:amd64 (3.7-3ubuntu1) ... 49s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75620 files and directories currently installed.) 49s Preparing to unpack .../libpam-modules-bin_1.5.3-7ubuntu4_amd64.deb ... 49s Unpacking libpam-modules-bin (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ... 49s Setting up libpam-modules-bin (1.5.3-7ubuntu4) ... 50s pam_namespace.service is a disabled or a static unit not running, not starting it. 50s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75620 files and directories currently installed.) 50s Preparing to unpack .../libpam-modules_1.5.3-7ubuntu4_amd64.deb ... 50s Unpacking libpam-modules:amd64 (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ... 50s Setting up libpam-modules:amd64 (1.5.3-7ubuntu4) ... 50s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75620 files and directories currently installed.) 50s Preparing to unpack .../openssh-sftp-server_1%3a9.9p1-3ubuntu2_amd64.deb ... 50s Unpacking openssh-sftp-server (1:9.9p1-3ubuntu2) over (1:9.7p1-7ubuntu5) ... 50s Preparing to unpack .../openssh-server_1%3a9.9p1-3ubuntu2_amd64.deb ... 50s Unpacking openssh-server (1:9.9p1-3ubuntu2) over (1:9.7p1-7ubuntu5) ... 50s Preparing to unpack .../openssh-client_1%3a9.9p1-3ubuntu2_amd64.deb ... 50s Unpacking openssh-client (1:9.9p1-3ubuntu2) over (1:9.7p1-7ubuntu5) ... 50s Preparing to unpack .../libpam-runtime_1.5.3-7ubuntu4_all.deb ... 50s Unpacking libpam-runtime (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ... 50s Setting up libpam-runtime (1.5.3-7ubuntu4) ... 50s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75622 files and directories currently installed.) 50s Preparing to unpack .../libsemanage-common_3.7-2build1_all.deb ... 50s Unpacking libsemanage-common (3.7-2build1) over (3.5-1build6) ... 50s Setting up libsemanage-common (3.7-2build1) ... 50s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75621 files and directories currently installed.) 50s Preparing to unpack .../libsemanage2_3.7-2build1_amd64.deb ... 50s Unpacking libsemanage2:amd64 (3.7-2build1) over (3.5-1build6) ... 51s Setting up libsemanage2:amd64 (3.7-2build1) ... 51s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75621 files and directories currently installed.) 51s Preparing to unpack .../00-distro-info_1.12_amd64.deb ... 51s Unpacking distro-info (1.12) over (1.9) ... 51s Preparing to unpack .../01-gir1.2-girepository-2.0_1.82.0-2_amd64.deb ... 51s Unpacking gir1.2-girepository-2.0:amd64 (1.82.0-2) over (1.80.1-4) ... 51s Preparing to unpack .../02-gir1.2-glib-2.0_2.82.2-3_amd64.deb ... 51s Unpacking gir1.2-glib-2.0:amd64 (2.82.2-3) over (2.82.1-0ubuntu1) ... 51s Preparing to unpack .../03-libglib2.0-0t64_2.82.2-3_amd64.deb ... 51s Unpacking libglib2.0-0t64:amd64 (2.82.2-3) over (2.82.1-0ubuntu1) ... 51s Preparing to unpack .../04-libgirepository-1.0-1_1.82.0-2_amd64.deb ... 51s Unpacking libgirepository-1.0-1:amd64 (1.82.0-2) over (1.80.1-4) ... 51s Preparing to unpack .../05-libglib2.0-data_2.82.2-3_all.deb ... 51s Unpacking libglib2.0-data (2.82.2-3) over (2.82.1-0ubuntu1) ... 51s Preparing to unpack .../06-python3-dbus_1.3.2-5build4_amd64.deb ... 51s Unpacking python3-dbus (1.3.2-5build4) over (1.3.2-5build3) ... 51s Preparing to unpack .../07-python3-gi_3.50.0-3build1_amd64.deb ... 51s Unpacking python3-gi (3.50.0-3build1) over (3.50.0-3) ... 51s Preparing to unpack .../08-python3-yaml_6.0.2-1build1_amd64.deb ... 51s Unpacking python3-yaml (6.0.2-1build1) over (6.0.2-1) ... 51s Preparing to unpack .../09-vim-tiny_2%3a9.1.0861-1ubuntu1_amd64.deb ... 51s Unpacking vim-tiny (2:9.1.0861-1ubuntu1) over (2:9.1.0777-1ubuntu1) ... 51s Preparing to unpack .../10-vim-common_2%3a9.1.0861-1ubuntu1_all.deb ... 51s Unpacking vim-common (2:9.1.0861-1ubuntu1) over (2:9.1.0777-1ubuntu1) ... 51s Preparing to unpack .../11-xxd_2%3a9.1.0861-1ubuntu1_amd64.deb ... 51s Unpacking xxd (2:9.1.0861-1ubuntu1) over (2:9.1.0777-1ubuntu1) ... 51s Preparing to unpack .../12-libplymouth5_24.004.60-2ubuntu3_amd64.deb ... 51s Unpacking libplymouth5:amd64 (24.004.60-2ubuntu3) over (24.004.60-1ubuntu11) ... 51s Preparing to unpack .../13-plymouth-theme-ubuntu-text_24.004.60-2ubuntu3_amd64.deb ... 51s Unpacking plymouth-theme-ubuntu-text (24.004.60-2ubuntu3) over (24.004.60-1ubuntu11) ... 51s Preparing to unpack .../14-plymouth_24.004.60-2ubuntu3_amd64.deb ... 51s Unpacking plymouth (24.004.60-2ubuntu3) over (24.004.60-1ubuntu11) ... 51s Preparing to unpack .../15-bpftrace_0.21.2-2ubuntu3_amd64.deb ... 51s Unpacking bpftrace (0.21.2-2ubuntu3) over (0.21.2-2ubuntu2) ... 51s Preparing to unpack .../16-curl_8.9.1-2ubuntu3_amd64.deb ... 51s Unpacking curl (8.9.1-2ubuntu3) over (8.9.1-2ubuntu2) ... 51s Preparing to unpack .../17-libcurl4t64_8.9.1-2ubuntu3_amd64.deb ... 51s Unpacking libcurl4t64:amd64 (8.9.1-2ubuntu3) over (8.9.1-2ubuntu2) ... 51s Preparing to unpack .../18-dracut-install_105-2ubuntu2_amd64.deb ... 51s Unpacking dracut-install (105-2ubuntu2) over (105-1ubuntu1) ... 51s Preparing to unpack .../19-fwupd-signed_1.55+1.7-1_amd64.deb ... 51s Unpacking fwupd-signed (1.55+1.7-1) over (1.54+1.6-1build1) ... 51s Preparing to unpack .../20-libcurl3t64-gnutls_8.9.1-2ubuntu3_amd64.deb ... 51s Unpacking libcurl3t64-gnutls:amd64 (8.9.1-2ubuntu3) over (8.9.1-2ubuntu2) ... 52s Selecting previously unselected package libsgutils2-1.48:amd64. 52s Preparing to unpack .../21-libsgutils2-1.48_1.48-0ubuntu1_amd64.deb ... 52s Unpacking libsgutils2-1.48:amd64 (1.48-0ubuntu1) ... 52s Preparing to unpack .../22-linux-base_4.10.1ubuntu1_all.deb ... 52s Unpacking linux-base (4.10.1ubuntu1) over (4.5ubuntu9) ... 52s Preparing to unpack .../23-lxd-installer_10_all.deb ... 52s Unpacking lxd-installer (10) over (9) ... 52s Preparing to unpack .../24-pinentry-curses_1.3.1-0ubuntu2_amd64.deb ... 52s Unpacking pinentry-curses (1.3.1-0ubuntu2) over (1.2.1-3ubuntu5) ... 52s Preparing to unpack .../25-python3-blinker_1.9.0-1_all.deb ... 52s Unpacking python3-blinker (1.9.0-1) over (1.8.2-1) ... 52s Preparing to unpack .../26-python3-rpds-py_0.21.0-2ubuntu1_amd64.deb ... 52s Unpacking python3-rpds-py (0.21.0-2ubuntu1) over (0.20.0-0ubuntu3) ... 52s Preparing to unpack .../27-python3-jsonschema-specifications_2023.12.1-2_all.deb ... 52s Unpacking python3-jsonschema-specifications (2023.12.1-2) over (2023.12.1-1ubuntu1) ... 52s Preparing to unpack .../28-sg3-utils_1.48-0ubuntu1_amd64.deb ... 52s Unpacking sg3-utils (1.48-0ubuntu1) over (1.46-3ubuntu5) ... 52s Preparing to unpack .../29-sg3-utils-udev_1.48-0ubuntu1_all.deb ... 52s Unpacking sg3-utils-udev (1.48-0ubuntu1) over (1.46-3ubuntu5) ... 52s Preparing to unpack .../30-amd64-microcode_3.20240820.1ubuntu1_amd64.deb ... 52s Unpacking amd64-microcode (3.20240820.1ubuntu1) over (3.20240116.2+nmu1ubuntu1.1) ... 52s Preparing to unpack .../31-intel-microcode_3.20241112.1ubuntu2_amd64.deb ... 52s Unpacking intel-microcode (3.20241112.1ubuntu2) over (3.20240910.0ubuntu1) ... 52s Setting up pinentry-curses (1.3.1-0ubuntu2) ... 52s Setting up distro-info (1.12) ... 52s Setting up linux-base (4.10.1ubuntu1) ... 52s Setting up libcurl4t64:amd64 (8.9.1-2ubuntu3) ... 52s Setting up bpftrace (0.21.2-2ubuntu3) ... 52s Setting up openssh-client (1:9.9p1-3ubuntu2) ... 52s Setting up intel-microcode (3.20241112.1ubuntu2) ... 52s intel-microcode: microcode will be updated at next boot 52s Setting up python3-debconf (1.5.87ubuntu1) ... 52s Setting up libcurl3t64-gnutls:amd64 (8.9.1-2ubuntu3) ... 52s Setting up fwupd-signed (1.55+1.7-1) ... 52s Setting up libsgutils2-1.48:amd64 (1.48-0ubuntu1) ... 52s Setting up python3-yaml (6.0.2-1build1) ... 52s Setting up debconf-i18n (1.5.87ubuntu1) ... 52s Setting up amd64-microcode (3.20240820.1ubuntu1) ... 52s amd64-microcode: microcode will be updated at next boot 52s Setting up xxd (2:9.1.0861-1ubuntu1) ... 52s Setting up libglib2.0-0t64:amd64 (2.82.2-3) ... 52s No schema files found: doing nothing. 52s Setting up libglib2.0-data (2.82.2-3) ... 52s Setting up vim-common (2:9.1.0861-1ubuntu1) ... 52s Setting up gir1.2-glib-2.0:amd64 (2.82.2-3) ... 52s Setting up lxd-installer (10) ... 53s Setting up python3-rpds-py (0.21.0-2ubuntu1) ... 53s Setting up dracut-install (105-2ubuntu2) ... 53s Setting up libplymouth5:amd64 (24.004.60-2ubuntu3) ... 53s Setting up libgirepository-1.0-1:amd64 (1.82.0-2) ... 53s Setting up curl (8.9.1-2ubuntu3) ... 53s Setting up python3-jsonschema-specifications (2023.12.1-2) ... 53s Setting up sg3-utils (1.48-0ubuntu1) ... 53s Setting up python3-blinker (1.9.0-1) ... 53s Setting up openssh-sftp-server (1:9.9p1-3ubuntu2) ... 53s Setting up python3-dbus (1.3.2-5build4) ... 53s Setting up openssh-server (1:9.9p1-3ubuntu2) ... 53s Installing new version of config file /etc/ssh/moduli ... 53s Replacing config file /etc/ssh/sshd_config with new version 54s Setting up plymouth (24.004.60-2ubuntu3) ... 54s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic 54s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 62s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults 63s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults 63s Setting up vim-tiny (2:9.1.0861-1ubuntu1) ... 63s Setting up sg3-utils-udev (1.48-0ubuntu1) ... 63s update-initramfs: deferring update (trigger activated) 63s Setting up plymouth-theme-ubuntu-text (24.004.60-2ubuntu3) ... 63s update-initramfs: deferring update (trigger activated) 63s Setting up gir1.2-girepository-2.0:amd64 (1.82.0-2) ... 63s Setting up python3-gi (3.50.0-3build1) ... 63s Processing triggers for install-info (7.1.1-1) ... 63s Processing triggers for initramfs-tools (0.142ubuntu35) ... 63s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic 63s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 71s Processing triggers for libc-bin (2.40-1ubuntu3) ... 71s Processing triggers for ufw (0.36.2-8) ... 71s Processing triggers for man-db (2.13.0-1) ... 72s Processing triggers for debianutils (5.21) ... 73s Reading package lists... 73s Building dependency tree... 73s Reading state information... 73s The following packages will be REMOVED: 73s libsgutils2-1.46-2* 73s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded. 73s After this operation, 294 kB disk space will be freed. 73s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75656 files and directories currently installed.) 73s Removing libsgutils2-1.46-2:amd64 (1.46-3ubuntu5) ... 73s Processing triggers for libc-bin (2.40-1ubuntu3) ... 74s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 74s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 74s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 74s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 75s Reading package lists... 75s Reading package lists... 75s Building dependency tree... 75s Reading state information... 75s Calculating upgrade... 76s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 76s Reading package lists... 76s Building dependency tree... 76s Reading state information... 76s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 76s autopkgtest [20:50:35]: rebooting testbed after setup commands that affected boot 80s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 94s autopkgtest [20:50:53]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 13:41:20 UTC 2024 98s autopkgtest [20:50:57]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-lwgeom 101s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-lwgeom 0.2-13-3build2 (dsc) [2591 B] 101s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-lwgeom 0.2-13-3build2 (tar) [475 kB] 101s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-lwgeom 0.2-13-3build2 (diff) [4332 B] 101s gpgv: Signature made Mon Apr 1 07:22:26 2024 UTC 101s gpgv: using RSA key A089FB36AAFBDAD5ACC1325069F790171A210984 101s gpgv: Can't check signature: No public key 101s dpkg-source: warning: cannot verify inline signature for ./r-cran-lwgeom_0.2-13-3build2.dsc: no acceptable signature found 101s autopkgtest [20:50:59]: testing package r-cran-lwgeom version 0.2-13-3build2 102s autopkgtest [20:51:01]: build not needed 104s autopkgtest [20:51:03]: test run-unit-test: preparing testbed 106s Reading package lists... 106s Building dependency tree... 106s Reading state information... 106s Starting pkgProblemResolver with broken count: 0 106s Starting 2 pkgProblemResolver with broken count: 0 106s Done 106s The following additional packages will be installed: 106s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 106s fonts-glyphicons-halflings gdal-data gdal-plugins libaec0 libaom3 106s libarmadillo14 libarpack2t64 libblas3 libblosc1 libcairo2 libcfitsio10t64 106s libdatrie1 libde265-0 libdeflate0 libfontconfig1 libfreexl1 libfyba0t64 106s libgdal35 libgeos-c1t64 libgeos3.13.0 libgeotiff5 libgfortran5 libgif7 106s libgomp1 libgpgmepp6t64 libgraphite2-3 libharfbuzz0b libhdf4-0-alt 106s libhdf5-103-1t64 libhdf5-hl-100t64 libheif-plugin-aomdec 106s libheif-plugin-libde265 libheif1 libice6 libjbig0 libjpeg-turbo8 libjpeg8 106s libjs-bootstrap libkmlbase1t64 libkmldom1t64 libkmlengine1t64 liblapack3 106s liblcms2-2 liblerc4 libltdl7 libminizip1t64 libmysqlclient21 libnetcdf19t64 106s libodbc2 libodbcinst2 libogdi4.1 libopenjp2-7 libpango-1.0-0 106s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 106s libpoppler140 libpq5 libproj25 libqhull-r8.0 librttopo1 libsharpyuv0 libsm6 106s libsnappy1v5 libspatialite8t64 libsz2 libtcl8.6 libthai-data libthai0 106s libtiff6 libtk8.6 libudunits2-0 libudunits2-data liburiparser1 libwebp7 106s libxcb-render0 libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1 106s libxt6t64 littler mysql-common node-html5shiv proj-data r-base-core 106s r-cran-askpass r-cran-brio r-cran-callr r-cran-class r-cran-classint 106s r-cran-cli r-cran-covr r-cran-crayon r-cran-curl r-cran-dbi r-cran-desc 106s r-cran-diffobj r-cran-digest r-cran-e1071 r-cran-evaluate r-cran-fansi 106s r-cran-fs r-cran-geosphere r-cran-glue r-cran-httr r-cran-jsonlite 106s r-cran-kernsmooth r-cran-lattice r-cran-lazyeval r-cran-lifecycle 106s r-cran-littler r-cran-lwgeom r-cran-magrittr r-cran-mass r-cran-mime 106s r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig 106s r-cran-pkgkitten r-cran-pkgload r-cran-praise r-cran-processx r-cran-proxy 106s r-cran-ps r-cran-r6 r-cran-rcpp r-cran-rematch2 r-cran-rex r-cran-rlang 106s r-cran-rprojroot r-cran-s2 r-cran-sf r-cran-sp r-cran-sys r-cran-testthat 106s r-cran-tibble r-cran-units r-cran-utf8 r-cran-vctrs r-cran-waldo 106s r-cran-withr r-cran-wk r-cran-yaml unixodbc-common unzip x11-common 106s xdg-utils zip 106s Suggested packages: 106s geotiff-bin gdal-bin libgeotiff-epsg libhdf4-alt-dev hdf4-tools 106s libheif-plugin-x265 libheif-plugin-ffmpegdec libheif-plugin-jpegdec 106s libheif-plugin-jpegenc libheif-plugin-j2kdec libheif-plugin-j2kenc 106s libheif-plugin-kvazaar libheif-plugin-rav1e libheif-plugin-svtenc 106s liblcms2-utils odbc-postgresql tdsodbc ogdi-bin proj-bin tcl8.6 tk8.6 nodejs 106s elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html r-cran-rstudioapi 106s r-cran-rmysql r-cran-knitr r-cran-rmarkdown r-cran-getopt r-cran-bit64 106s r-cran-dplyr r-cran-formattable r-cran-ggplot2 r-cran-nanotime 106s r-cran-palmerpenguins r-cran-scales r-cran-stringi r-cran-survival 106s r-cran-vdiffr r-cran-inline r-cran-hmisc r-cran-roxygen2 r-cran-rvest 106s r-cran-stringr r-cran-bench r-cran-blob r-cran-here r-cran-hms 106s r-cran-htmltools r-cran-purrr r-cran-tidyr 106s Recommended packages: 106s proj-bin libheif-plugin-aomenc poppler-data r-recommended r-base-dev 106s r-doc-html r-cran-mockery r-cran-spelling r-cran-spdata r-cran-knitr 106s r-cran-rmarkdown r-cran-tinytest r-cran-htmltools r-cran-htmlwidgets 106s r-cran-rstudioapi r-cran-whoami r-cran-dt r-cran-xml2 r-cran-memoise 106s r-cran-later r-cran-httpuv r-cran-webutils r-cran-gh r-cran-ggplot2 106s r-cran-unitizer r-cran-raster r-cran-dplyr r-cran-rsqlite r-cran-jpeg 106s r-cran-png r-cran-readr r-cran-r.rsp r-cran-lintr r-cran-tidyverse 106s r-cran-sodium r-cran-lubridate r-cran-cpp11 r-cran-bitops r-cran-mathjaxr 106s r-cran-remotes r-cran-usethis r-cran-codetools r-cran-webfakes r-cran-cba 106s r-cran-pingr r-cran-mockr r-cran-bit64 r-cran-blob r-cran-nanoarrow 106s r-cran-maps r-cran-matrix r-cran-microbenchmark r-cran-pbapply 106s r-cran-rpostgresql r-cran-spatstat r-cran-spatstat.geom 106s r-cran-spatstat.random r-cran-spatstat.linnet r-cran-spatstat.utils 106s r-cran-stars r-cran-terra r-cran-tidyr r-cran-tidyselect r-cran-rcolorbrewer 106s r-cran-gstat r-cran-deldir r-cran-shiny r-cran-data.table r-cran-formattable 106s r-cran-vdiffr r-cran-generics r-cran-pkgdown r-cran-zeallot r-cran-runit 106s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 106s x11-xserver-utils 106s The following NEW packages will be installed: 106s autopkgtest-satdep fontconfig fontconfig-config fonts-dejavu-core 106s fonts-dejavu-mono fonts-glyphicons-halflings gdal-data gdal-plugins libaec0 106s libaom3 libarmadillo14 libarpack2t64 libblas3 libblosc1 libcairo2 106s libcfitsio10t64 libdatrie1 libde265-0 libdeflate0 libfontconfig1 libfreexl1 106s libfyba0t64 libgdal35 libgeos-c1t64 libgeos3.13.0 libgeotiff5 libgfortran5 106s libgif7 libgomp1 libgpgmepp6t64 libgraphite2-3 libharfbuzz0b libhdf4-0-alt 106s libhdf5-103-1t64 libhdf5-hl-100t64 libheif-plugin-aomdec 106s libheif-plugin-libde265 libheif1 libice6 libjbig0 libjpeg-turbo8 libjpeg8 106s libjs-bootstrap libkmlbase1t64 libkmldom1t64 libkmlengine1t64 liblapack3 106s liblcms2-2 liblerc4 libltdl7 libminizip1t64 libmysqlclient21 libnetcdf19t64 106s libodbc2 libodbcinst2 libogdi4.1 libopenjp2-7 libpango-1.0-0 106s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 106s libpoppler140 libpq5 libproj25 libqhull-r8.0 librttopo1 libsharpyuv0 libsm6 106s libsnappy1v5 libspatialite8t64 libsz2 libtcl8.6 libthai-data libthai0 106s libtiff6 libtk8.6 libudunits2-0 libudunits2-data liburiparser1 libwebp7 106s libxcb-render0 libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1 106s libxt6t64 littler mysql-common node-html5shiv proj-data r-base-core 106s r-cran-askpass r-cran-brio r-cran-callr r-cran-class r-cran-classint 106s r-cran-cli r-cran-covr r-cran-crayon r-cran-curl r-cran-dbi r-cran-desc 106s r-cran-diffobj r-cran-digest r-cran-e1071 r-cran-evaluate r-cran-fansi 106s r-cran-fs r-cran-geosphere r-cran-glue r-cran-httr r-cran-jsonlite 106s r-cran-kernsmooth r-cran-lattice r-cran-lazyeval r-cran-lifecycle 106s r-cran-littler r-cran-lwgeom r-cran-magrittr r-cran-mass r-cran-mime 106s r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig 106s r-cran-pkgkitten r-cran-pkgload r-cran-praise r-cran-processx r-cran-proxy 106s r-cran-ps r-cran-r6 r-cran-rcpp r-cran-rematch2 r-cran-rex r-cran-rlang 106s r-cran-rprojroot r-cran-s2 r-cran-sf r-cran-sp r-cran-sys r-cran-testthat 106s r-cran-tibble r-cran-units r-cran-utf8 r-cran-vctrs r-cran-waldo 106s r-cran-withr r-cran-wk r-cran-yaml unixodbc-common unzip x11-common 106s xdg-utils zip 106s 0 upgraded, 158 newly installed, 0 to remove and 0 not upgraded. 106s Need to get 107 MB/107 MB of archives. 106s After this operation, 261 MB of additional disk space will be used. 106s Get:1 /tmp/autopkgtest.c9nj1U/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [732 B] 107s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 107s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 107s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB] 107s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB] 107s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB] 107s Get:7 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 107s Get:8 http://ftpmaster.internal/ubuntu plucky/universe amd64 gdal-data all 3.9.3+dfsg-1build1 [269 kB] 107s Get:9 http://ftpmaster.internal/ubuntu plucky/universe amd64 gdal-plugins amd64 3.9.3+dfsg-1build1 [25.3 kB] 107s Get:10 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 107s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libaom3 amd64 3.11.0-1 [2761 kB] 108s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-3build2 [247 kB] 108s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-8ubuntu1 [909 kB] 108s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-3build2 [2668 kB] 108s Get:15 http://ftpmaster.internal/ubuntu plucky/universe amd64 libarpack2t64 amd64 3.9.1-1.1ubuntu1 [107 kB] 108s Get:16 http://ftpmaster.internal/ubuntu plucky/universe amd64 libarmadillo14 amd64 1:14.0.1+dfsg-2build1 [104 kB] 108s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libsnappy1v5 amd64 1.2.1-1 [30.4 kB] 108s Get:18 http://ftpmaster.internal/ubuntu plucky/universe amd64 libblosc1 amd64 1.21.5+ds-1build1 [36.2 kB] 108s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 108s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 108s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 108s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 108s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 108s Get:24 http://ftpmaster.internal/ubuntu plucky/universe amd64 libcfitsio10t64 amd64 4.4.1-2 [524 kB] 108s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 108s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libde265-0 amd64 1.0.15-1build4 [168 kB] 108s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.22-1 [64.5 kB] 108s Get:28 http://ftpmaster.internal/ubuntu plucky/universe amd64 libfyba0t64 amd64 4.1.1-11build1 [119 kB] 108s Get:29 http://ftpmaster.internal/ubuntu plucky/universe amd64 libminizip1t64 amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [22.9 kB] 108s Get:30 http://ftpmaster.internal/ubuntu plucky/universe amd64 libfreexl1 amd64 2.0.0-1build2 [41.7 kB] 108s Get:31 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeos3.13.0 amd64 3.13.0-1 [1017 kB] 108s Get:32 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeos-c1t64 amd64 3.13.0-1 [103 kB] 108s Get:33 http://ftpmaster.internal/ubuntu plucky/universe amd64 proj-data all 9.5.0-1 [7919 kB] 109s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 109s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 109s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 109s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 109s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [17.5 kB] 109s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.4.0-0.1 [231 kB] 109s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 109s Get:41 http://ftpmaster.internal/ubuntu plucky/universe amd64 libproj25 amd64 9.5.0-1 [1500 kB] 109s Get:42 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeotiff5 amd64 1.7.3-1 [63.0 kB] 109s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libgif7 amd64 5.2.2-1ubuntu1 [35.2 kB] 109s Get:44 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 109s Get:45 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf4-0-alt amd64 4.3.0-1 [285 kB] 109s Get:46 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-103-1t64 amd64 1.10.10+repack-4ubuntu3 [1280 kB] 109s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif-plugin-aomdec amd64 1.19.3-1 [11.5 kB] 109s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif-plugin-libde265 amd64 1.19.3-1 [8968 B] 109s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif1 amd64 1.19.3-1 [415 kB] 109s Get:50 http://ftpmaster.internal/ubuntu plucky/universe amd64 liburiparser1 amd64 0.9.8+dfsg-2 [46.8 kB] 109s Get:51 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmlbase1t64 amd64 1.3.0-12build1 [49.9 kB] 109s Get:52 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmldom1t64 amd64 1.3.0-12build1 [156 kB] 109s Get:53 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmlengine1t64 amd64 1.3.0-12build1 [71.4 kB] 109s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 mysql-common all 5.8+1.1.1 [6800 B] 109s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libmysqlclient21 amd64 8.0.40-1 [1250 kB] 109s Get:56 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-4ubuntu3 [56.6 kB] 109s Get:57 http://ftpmaster.internal/ubuntu plucky/universe amd64 libnetcdf19t64 amd64 1:4.9.2-6ubuntu1 [472 kB] 109s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl7 amd64 2.4.7-8 [43.9 kB] 109s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libodbc2 amd64 2.3.12-1ubuntu1 [158 kB] 109s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 unixodbc-common all 2.3.12-1ubuntu1 [8796 B] 109s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libodbcinst2 amd64 2.3.12-1ubuntu1 [30.7 kB] 109s Get:62 http://ftpmaster.internal/ubuntu plucky/universe amd64 libogdi4.1 amd64 4.1.1+ds-5 [219 kB] 109s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 libopenjp2-7 amd64 2.5.0-2ubuntu1 [184 kB] 109s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libgpgmepp6t64 amd64 1.24.0-2ubuntu1 [126 kB] 109s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 liblcms2-2 amd64 2.16-2 [212 kB] 109s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libpoppler140 amd64 24.08.0-3 [1262 kB] 109s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libpq5 amd64 17.0-1 [249 kB] 109s Get:68 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqhull-r8.0 amd64 2020.2-6build1 [193 kB] 109s Get:69 http://ftpmaster.internal/ubuntu plucky/universe amd64 librttopo1 amd64 1.1.0-3build2 [191 kB] 109s Get:70 http://ftpmaster.internal/ubuntu plucky/universe amd64 libspatialite8t64 amd64 5.1.0-3build1 [1919 kB] 110s Get:71 http://ftpmaster.internal/ubuntu plucky/universe amd64 libxerces-c3.2t64 amd64 3.2.4+debian-1.3 [917 kB] 110s Get:72 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgdal35 amd64 3.9.3+dfsg-1build1 [10.0 MB] 110s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-8ubuntu1 [148 kB] 110s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 110s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.0.1-1 [540 kB] 111s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 111s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 111s Get:78 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 111s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 111s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 111s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.54.0+ds-3 [252 kB] 111s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.54.0+ds-3 [51.6 kB] 111s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.54.0+ds-3 [29.1 kB] 111s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper1 amd64 1.1.29build1 [13.4 kB] 111s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 1.1.29build1 [8650 B] 111s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 111s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.15+dfsg-2 [1085 kB] 111s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 111s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 111s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.15-1 [862 kB] 111s Get:91 http://ftpmaster.internal/ubuntu plucky/universe amd64 libudunits2-data all 2.2.28-7build1 [19.4 kB] 111s Get:92 http://ftpmaster.internal/ubuntu plucky/universe amd64 libudunits2-0 amd64 2.2.28-7build1 [54.1 kB] 111s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 111s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu1 [185 kB] 111s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 111s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 111s Get:97 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.2-1 [28.9 MB] 113s Get:98 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-1 [96.0 kB] 113s Get:99 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-1 [2486 B] 113s Get:100 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 113s Get:101 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB] 113s Get:102 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB] 113s Get:103 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 114s Get:104 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ps amd64 1.8.0-1 [395 kB] 114s Get:105 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB] 114s Get:106 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-processx amd64 3.8.4-1 [353 kB] 114s Get:107 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 114s Get:108 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mass amd64 7.3-61-1 [1109 kB] 114s Get:109 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-class amd64 7.3-22-2build1 [88.2 kB] 114s Get:110 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB] 114s Get:111 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-e1071 amd64 1.7-16-1 [565 kB] 114s Get:112 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernsmooth amd64 2.23-24-1 [92.9 kB] 114s Get:113 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-classint amd64 0.4-10+dfsg-1 [106 kB] 114s Get:114 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.3-1 [1348 kB] 114s Get:115 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB] 114s Get:116 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.8.9+dfsg-1 [445 kB] 114s Get:117 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lazyeval amd64 0.2.2-1build1 [144 kB] 114s Get:118 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rex all 1.2.1-1 [129 kB] 114s Get:119 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-curl amd64 5.2.1+dfsg-1 [180 kB] 114s Get:120 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 114s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-openssl amd64 2.2.0+dfsg-1 [405 kB] 114s Get:122 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 114s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.2-1 [164 kB] 114s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 114s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB] 114s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-covr amd64 3.6.4+dfsg-1 [303 kB] 114s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dbi all 1.2.3-1 [853 kB] 114s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 114s Get:129 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 115s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 1.0.0-1 [111 kB] 115s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 115s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.4+dfsg-1 [245 kB] 115s Get:133 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 115s Get:134 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.13-1-1 [1993 kB] 115s Get:135 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 115s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sp amd64 1:2.1-4+dfsg-1 [1472 kB] 115s Get:137 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-geosphere amd64 1.5-18-1 [1005 kB] 115s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.7.0-1 [154 kB] 115s Get:139 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.4-1 [1708 kB] 115s Get:140 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 115s Get:141 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-units amd64 0.8-5+dfsg-1 [275 kB] 115s Get:142 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 115s Get:143 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-wk amd64 0.9.4-1 [1791 kB] 115s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-s2 amd64 1.1.7-1 [2023 kB] 116s Get:145 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-sf amd64 1.0-17+dfsg-1 [3278 kB] 116s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lwgeom amd64 0.2-13-3build2 [420 kB] 116s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 116s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 116s Get:149 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 116s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgbuild all 1.4.4-1 [212 kB] 116s Get:151 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 116s Get:152 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rprojroot all 2.0.4-1 [124 kB] 116s Get:153 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgload all 1.4.0-1 [247 kB] 116s Get:154 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 116s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-2 [415 kB] 116s Get:156 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 116s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-waldo all 0.5.3-1 [120 kB] 116s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-testthat amd64 3.2.1.1-1 [1636 kB] 117s Preconfiguring packages ... 117s Fetched 107 MB in 10s (11.1 MB/s) 117s Selecting previously unselected package fonts-dejavu-mono. 117s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75651 files and directories currently installed.) 117s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8_all.deb ... 117s Unpacking fonts-dejavu-mono (2.37-8) ... 117s Selecting previously unselected package fonts-dejavu-core. 117s Preparing to unpack .../001-fonts-dejavu-core_2.37-8_all.deb ... 117s Unpacking fonts-dejavu-core (2.37-8) ... 117s Selecting previously unselected package fontconfig-config. 117s Preparing to unpack .../002-fontconfig-config_2.15.0-1.1ubuntu2_amd64.deb ... 117s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 117s Selecting previously unselected package libfontconfig1:amd64. 117s Preparing to unpack .../003-libfontconfig1_2.15.0-1.1ubuntu2_amd64.deb ... 117s Unpacking libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ... 117s Selecting previously unselected package fontconfig. 117s Preparing to unpack .../004-fontconfig_2.15.0-1.1ubuntu2_amd64.deb ... 117s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 117s Selecting previously unselected package fonts-glyphicons-halflings. 117s Preparing to unpack .../005-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 117s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 117s Selecting previously unselected package gdal-data. 117s Preparing to unpack .../006-gdal-data_3.9.3+dfsg-1build1_all.deb ... 117s Unpacking gdal-data (3.9.3+dfsg-1build1) ... 117s Selecting previously unselected package gdal-plugins:amd64. 117s Preparing to unpack .../007-gdal-plugins_3.9.3+dfsg-1build1_amd64.deb ... 117s Unpacking gdal-plugins:amd64 (3.9.3+dfsg-1build1) ... 117s Selecting previously unselected package libaec0:amd64. 117s Preparing to unpack .../008-libaec0_1.1.3-1_amd64.deb ... 117s Unpacking libaec0:amd64 (1.1.3-1) ... 117s Selecting previously unselected package libaom3:amd64. 117s Preparing to unpack .../009-libaom3_3.11.0-1_amd64.deb ... 117s Unpacking libaom3:amd64 (3.11.0-1) ... 117s Selecting previously unselected package libblas3:amd64. 117s Preparing to unpack .../010-libblas3_3.12.0-3build2_amd64.deb ... 117s Unpacking libblas3:amd64 (3.12.0-3build2) ... 117s Selecting previously unselected package libgfortran5:amd64. 117s Preparing to unpack .../011-libgfortran5_14.2.0-8ubuntu1_amd64.deb ... 117s Unpacking libgfortran5:amd64 (14.2.0-8ubuntu1) ... 117s Selecting previously unselected package liblapack3:amd64. 117s Preparing to unpack .../012-liblapack3_3.12.0-3build2_amd64.deb ... 117s Unpacking liblapack3:amd64 (3.12.0-3build2) ... 117s Selecting previously unselected package libarpack2t64:amd64. 117s Preparing to unpack .../013-libarpack2t64_3.9.1-1.1ubuntu1_amd64.deb ... 117s Unpacking libarpack2t64:amd64 (3.9.1-1.1ubuntu1) ... 117s Selecting previously unselected package libarmadillo14. 117s Preparing to unpack .../014-libarmadillo14_1%3a14.0.1+dfsg-2build1_amd64.deb ... 117s Unpacking libarmadillo14 (1:14.0.1+dfsg-2build1) ... 118s Selecting previously unselected package libsnappy1v5:amd64. 118s Preparing to unpack .../015-libsnappy1v5_1.2.1-1_amd64.deb ... 118s Unpacking libsnappy1v5:amd64 (1.2.1-1) ... 118s Selecting previously unselected package libblosc1:amd64. 118s Preparing to unpack .../016-libblosc1_1.21.5+ds-1build1_amd64.deb ... 118s Unpacking libblosc1:amd64 (1.21.5+ds-1build1) ... 118s Selecting previously unselected package libpixman-1-0:amd64. 118s Preparing to unpack .../017-libpixman-1-0_0.44.0-3_amd64.deb ... 118s Unpacking libpixman-1-0:amd64 (0.44.0-3) 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libdatrie1:amd64. 118s Preparing to unpack .../023-libdatrie1_0.2.13-3build1_amd64.deb ... 118s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 118s Selecting previously unselected package libde265-0:amd64. 118s Preparing to unpack .../024-libde265-0_1.0.15-1build4_amd64.deb ... 118s Unpacking libde265-0:amd64 (1.0.15-1build4) ... 118s Selecting previously unselected package libdeflate0:amd64. 118s Preparing to unpack .../025-libdeflate0_1.22-1_amd64.deb ... 118s Unpacking libdeflate0:amd64 (1.22-1) ... 118s Selecting previously unselected package libfyba0t64:amd64. 118s Preparing to unpack .../026-libfyba0t64_4.1.1-11build1_amd64.deb ... 118s Unpacking libfyba0t64:amd64 (4.1.1-11build1) ... 118s Selecting previously unselected package libminizip1t64:amd64. 118s Preparing to unpack .../027-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ... 118s Unpacking libminizip1t64:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 118s Selecting previously unselected package libfreexl1:amd64. 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unselected package libproj25:amd64. 118s Preparing to unpack .../039-libproj25_9.5.0-1_amd64.deb ... 118s Unpacking libproj25:amd64 (9.5.0-1) ... 118s Selecting previously unselected package libgeotiff5:amd64. 118s Preparing to unpack .../040-libgeotiff5_1.7.3-1_amd64.deb ... 118s Unpacking libgeotiff5:amd64 (1.7.3-1) ... 118s Selecting previously unselected package libgif7:amd64. 118s Preparing to unpack .../041-libgif7_5.2.2-1ubuntu1_amd64.deb ... 118s Unpacking libgif7:amd64 (5.2.2-1ubuntu1) ... 118s Selecting previously unselected package libsz2:amd64. 118s Preparing to unpack .../042-libsz2_1.1.3-1_amd64.deb ... 118s Unpacking libsz2:amd64 (1.1.3-1) ... 118s Selecting previously unselected package libhdf4-0-alt:amd64. 118s Preparing to unpack .../043-libhdf4-0-alt_4.3.0-1_amd64.deb ... 118s Unpacking libhdf4-0-alt:amd64 (4.3.0-1) ... 118s Selecting previously unselected package libhdf5-103-1t64:amd64. 118s Preparing to unpack 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(3.2.4+debian-1.3) ... 119s Selecting previously unselected package libgdal35:amd64. 119s Preparing to unpack .../070-libgdal35_3.9.3+dfsg-1build1_amd64.deb ... 119s Unpacking libgdal35:amd64 (3.9.3+dfsg-1build1) ... 119s Selecting previously unselected package libgomp1:amd64. 119s Preparing to unpack .../071-libgomp1_14.2.0-8ubuntu1_amd64.deb ... 119s Unpacking libgomp1:amd64 (14.2.0-8ubuntu1) ... 119s Selecting previously unselected package libgraphite2-3:amd64. 119s Preparing to unpack .../072-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 119s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 119s Selecting previously unselected package libharfbuzz0b:amd64. 119s Preparing to unpack .../073-libharfbuzz0b_10.0.1-1_amd64.deb ... 119s Unpacking libharfbuzz0b:amd64 (10.0.1-1) ... 119s Selecting previously unselected package x11-common. 119s Preparing to unpack .../074-x11-common_1%3a7.7+23ubuntu3_all.deb ... 119s Unpacking x11-common (1:7.7+23ubuntu3) ... 119s Selecting previously unselected package libice6:amd64. 119s Preparing to unpack .../075-libice6_2%3a1.1.1-1_amd64.deb ... 119s Unpacking libice6:amd64 (2:1.1.1-1) ... 119s Selecting previously unselected package libjs-bootstrap. 119s Preparing to unpack .../076-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 119s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 119s Selecting previously unselected package libthai-data. 119s Preparing to unpack .../077-libthai-data_0.1.29-2build1_all.deb ... 119s Unpacking libthai-data (0.1.29-2build1) ... 119s Selecting previously unselected package libthai0:amd64. 119s Preparing to unpack .../078-libthai0_0.1.29-2build1_amd64.deb ... 119s Unpacking libthai0:amd64 (0.1.29-2build1) ... 119s Selecting previously unselected package libpango-1.0-0:amd64. 119s Preparing to unpack .../079-libpango-1.0-0_1.54.0+ds-3_amd64.deb ... 119s Unpacking libpango-1.0-0:amd64 (1.54.0+ds-3) ... 119s Selecting previously unselected package libpangoft2-1.0-0:amd64. 119s Preparing to unpack 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Unpacking libtcl8.6:amd64 (8.6.15+dfsg-2) ... 120s Selecting previously unselected package libxft2:amd64. 120s Preparing to unpack .../086-libxft2_2.3.6-1build1_amd64.deb ... 120s Unpacking libxft2:amd64 (2.3.6-1build1) ... 120s Selecting previously unselected package libxss1:amd64. 120s Preparing to unpack .../087-libxss1_1%3a1.2.3-1build3_amd64.deb ... 120s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 120s Selecting previously unselected package libtk8.6:amd64. 120s Preparing to unpack .../088-libtk8.6_8.6.15-1_amd64.deb ... 120s Unpacking libtk8.6:amd64 (8.6.15-1) ... 120s Selecting previously unselected package libudunits2-data. 120s Preparing to unpack .../089-libudunits2-data_2.2.28-7build1_all.deb ... 120s Unpacking libudunits2-data (2.2.28-7build1) ... 120s Selecting previously unselected package libudunits2-0. 120s Preparing to unpack .../090-libudunits2-0_2.2.28-7build1_amd64.deb ... 120s Unpacking libudunits2-0 (2.2.28-7build1) ... 120s Selecting previously unselected package libxt6t64:amd64. 120s Preparing to unpack .../091-libxt6t64_1%3a1.2.1-1.2build1_amd64.deb ... 120s Unpacking libxt6t64:amd64 (1:1.2.1-1.2build1) ... 120s Selecting previously unselected package zip. 120s Preparing to unpack .../092-zip_3.0-14ubuntu1_amd64.deb ... 120s Unpacking zip (3.0-14ubuntu1) ... 120s Selecting previously unselected package unzip. 120s Preparing to unpack .../093-unzip_6.0-28ubuntu6_amd64.deb ... 120s Unpacking unzip (6.0-28ubuntu6) ... 120s Selecting previously unselected package xdg-utils. 120s Preparing to unpack .../094-xdg-utils_1.2.1-0ubuntu1_all.deb ... 120s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 120s Selecting previously unselected package r-base-core. 120s Preparing to unpack .../095-r-base-core_4.4.2-1_amd64.deb ... 120s Unpacking r-base-core (4.4.2-1) ... 120s Selecting previously unselected package r-cran-littler. 120s Preparing to unpack .../096-r-cran-littler_0.3.20-1_amd64.deb ... 120s Unpacking r-cran-littler (0.3.20-1) ... 120s Selecting previously unselected package littler. 120s Preparing to unpack .../097-littler_0.3.20-1_all.deb ... 120s Unpacking littler (0.3.20-1) ... 120s Selecting previously unselected package node-html5shiv. 120s Preparing to unpack .../098-node-html5shiv_3.7.3+dfsg-5_all.deb ... 120s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 120s Selecting previously unselected package r-cran-sys. 120s Preparing to unpack .../099-r-cran-sys_3.4.3-1_amd64.deb ... 120s Unpacking r-cran-sys (3.4.3-1) ... 120s Selecting previously unselected package r-cran-askpass. 120s Preparing to unpack .../100-r-cran-askpass_1.2.1-1_amd64.deb ... 120s Unpacking r-cran-askpass (1.2.1-1) ... 120s Selecting previously unselected package r-cran-brio. 120s Preparing to unpack .../101-r-cran-brio_1.1.5-1_amd64.deb ... 120s Unpacking r-cran-brio (1.1.5-1) ... 120s Selecting previously unselected package r-cran-ps. 120s Preparing to unpack .../102-r-cran-ps_1.8.0-1_amd64.deb ... 120s Unpacking r-cran-ps (1.8.0-1) ... 120s Selecting previously unselected package r-cran-r6. 120s Preparing to unpack .../103-r-cran-r6_2.5.1-1_all.deb ... 120s Unpacking r-cran-r6 (2.5.1-1) ... 120s Selecting previously unselected package r-cran-processx. 120s Preparing to unpack .../104-r-cran-processx_3.8.4-1_amd64.deb ... 120s Unpacking r-cran-processx (3.8.4-1) ... 120s Selecting previously unselected package r-cran-callr. 120s Preparing to unpack .../105-r-cran-callr_3.7.6-1_all.deb ... 120s Unpacking r-cran-callr (3.7.6-1) ... 120s Selecting previously unselected package r-cran-mass. 120s Preparing to unpack .../106-r-cran-mass_7.3-61-1_amd64.deb ... 120s Unpacking r-cran-mass (7.3-61-1) ... 120s Selecting previously unselected package r-cran-class. 120s Preparing to unpack .../107-r-cran-class_7.3-22-2build1_amd64.deb ... 120s Unpacking r-cran-class (7.3-22-2build1) ... 120s Selecting previously unselected package r-cran-proxy. 120s Preparing to unpack .../108-r-cran-proxy_0.4-27-1_amd64.deb ... 120s Unpacking r-cran-proxy 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previously unselected package r-cran-httr. 121s Preparing to unpack .../120-r-cran-httr_1.4.7+dfsg-1_all.deb ... 121s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 121s Selecting previously unselected package r-cran-crayon. 121s Preparing to unpack .../121-r-cran-crayon_1.5.2-1_all.deb ... 121s Unpacking r-cran-crayon (1.5.2-1) ... 121s Selecting previously unselected package r-cran-withr. 121s Preparing to unpack .../122-r-cran-withr_3.0.2+dfsg-1_all.deb ... 121s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 121s Selecting previously unselected package r-cran-yaml. 121s Preparing to unpack .../123-r-cran-yaml_2.3.10-1_amd64.deb ... 121s Unpacking r-cran-yaml (2.3.10-1) ... 121s Selecting previously unselected package r-cran-covr. 121s Preparing to unpack .../124-r-cran-covr_3.6.4+dfsg-1_amd64.deb ... 121s Unpacking r-cran-covr (3.6.4+dfsg-1) ... 121s Selecting previously unselected package r-cran-dbi. 121s Preparing to unpack .../125-r-cran-dbi_1.2.3-1_all.deb ... 121s Unpacking r-cran-dbi 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libheif-plugin-libde265:amd64 (1.19.3-1) ... 125s Setting up libheif1:amd64 (1.19.3-1) ... 125s Setting up libgdal35:amd64 (3.9.3+dfsg-1build1) ... 125s Setting up r-cran-sf (1.0-17+dfsg-1) ... 125s Setting up r-cran-lwgeom (0.2-13-3build2) ... 125s Setting up autopkgtest-satdep (0) ... 125s Processing triggers for libc-bin (2.40-1ubuntu3) ... 125s Processing triggers for man-db (2.13.0-1) ... 126s Processing triggers for install-info (7.1.1-1) ... 132s (Reading database ... 84782 files and directories currently installed.) 132s Removing autopkgtest-satdep (0) ... 132s autopkgtest [20:51:31]: test run-unit-test: [----------------------- 133s BEGIN TEST azimuth.R 133s 133s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 133s Copyright (C) 2024 The R Foundation for Statistical Computing 133s Platform: x86_64-pc-linux-gnu 133s 133s R is free software and comes with ABSOLUTELY NO WARRANTY. 133s You are welcome to redistribute it under certain conditions. 133s Type 'license()' or 'licence()' for distribution details. 133s 133s R is a collaborative project with many contributors. 133s Type 'contributors()' for more information and 133s 'citation()' on how to cite R or R packages in publications. 133s 133s Type 'demo()' for some demos, 'help()' for on-line help, or 133s 'help.start()' for an HTML browser interface to help. 133s Type 'q()' to quit R. 133s 133s > suppressPackageStartupMessages(library(sf)) 133s > suppressPackageStartupMessages(library(lwgeom)) 133s Warning messages: 133s 1: In fun(libname, pkgname) : 133s GEOS versions differ: lwgeom has 3.12.1 sf has 3.12.2 133s 2: In fun(libname, pkgname) : 133s PROJ versions differ: lwgeom has 9.4.0 sf has 9.5.0 133s > p = st_sfc(st_point(c(7,52)), st_point(c(8,53)), crs = 4326) 133s > st_geod_azimuth(p) 133s 0.5410385 [rad] 133s > 133s BEGIN TEST dist.R 133s 133s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 133s Copyright (C) 2024 The R Foundation for Statistical Computing 133s Platform: x86_64-pc-linux-gnu 133s 133s R is free software and comes with ABSOLUTELY NO WARRANTY. 133s You are welcome to redistribute it under certain conditions. 133s Type 'license()' or 'licence()' for distribution details. 133s 133s R is a collaborative project with many contributors. 133s Type 'contributors()' for more information and 133s 'citation()' on how to cite R or R packages in publications. 133s 133s Type 'demo()' for some demos, 'help()' for on-line help, or 133s 'help.start()' for an HTML browser interface to help. 133s Type 'q()' to quit R. 133s 133s > suppressPackageStartupMessages(library(sf)) 134s > library(sp) 134s > suppressPackageStartupMessages(library(units)) 134s > library(geosphere) 134s > 134s > x = st_sfc( 134s + st_point(c(0,0)), 134s + st_point(c(1,0)), 134s + st_point(c(2,0)), 134s + st_point(c(3,0)), 134s + crs = 4326 134s + ) 134s > 134s > y = st_sfc( 134s + st_point(c(0,10)), 134s + st_point(c(1,0)), 134s + st_point(c(2,0)), 134s + st_point(c(3,0)), 134s + st_point(c(4,0)), 134s + crs = 4326 134s + ) 134s > 134s > st_crs(y) = 4326 134s > st_crs(x) = 4326 134s Spherical geometry (s2) switched off 134s > sf_use_s2(FALSE) 134s > (d.sf = st_distance(x, y)) 134s Units: [m] 134s [,1] [,2] [,3] [,4] [,5] 134s [1,] 1105855 111319.5 222639.0 333958.5 445278.0 134s [2,] 1111387 0.0 111319.5 222639.0 333958.5 134s [3,] 1127822 111319.5 0.0 111319.5 222639.0 134s [4,] 1154693 222639.0 111319.5 0.0 111319.5 134s > 134s BEGIN TEST geod.R 134s 134s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 134s Copyright (C) 2024 The R Foundation for Statistical Computing 134s Platform: x86_64-pc-linux-gnu 134s 134s R is free software and comes with ABSOLUTELY NO WARRANTY. 134s You are welcome to redistribute it under certain conditions. 134s Type 'license()' or 'licence()' for distribution details. 134s 134s R is a collaborative project with many contributors. 134s Type 'contributors()' for more information and 134s 'citation()' on how to cite R or R packages in publications. 134s 134s Type 'demo()' for some demos, 'help()' for on-line help, or 134s 'help.start()' for an HTML browser interface to help. 134s Type 'q()' to quit R. 134s 134s > ### Name: lw_geodetic 134s > ### Title: geodetic length, area, and predicates 134s > ### Aliases: lw_geodetic st_geod_area lw_geodetic st_geod_length 134s > ### lw_geodetic st_geod_segmentize lw_geodetic st_geod_covers 134s > 134s > ### ** Examples 134s > 134s > suppressPackageStartupMessages(library(sf)) 134s > suppressPackageStartupMessages(library(lwgeom)) 134s > suppressPackageStartupMessages(library(units)) 134s Warning messages: 134s 1: In fun(libname, pkgname) : 134s GEOS versions differ: lwgeom has 3.12.1 sf has 3.12.2 134s 2: In fun(libname, pkgname) : 134s PROJ versions differ: lwgeom has 9.4.0 sf has 9.5.0 134s > nc = st_read(system.file("gpkg/nc.gpkg", package="sf"), quiet = TRUE) 134s > st_geod_area(nc[1:3,]) 134s Units: [m^2] 134s [1] 1137388604 611077263 1423489919 134s > # st_area(nc[1:3,]) 134s > l = st_sfc(st_linestring(rbind(c(7,52), c(8,53))), crs = 4326) 134s > st_geod_length(l) 134s 130359.3 [m] 134s > pol = st_polygon(list(rbind(c(0,0), c(0,60), c(60,60), c(0,0)))) 134s > x = st_sfc(pol, crs = 4326) 134s > seg = st_geod_segmentize(x[1], set_units(10, km)) 134s > plot(seg, graticule = TRUE, axes = TRUE) 134s > pole = st_polygon(list(rbind(c(0,80), c(120,80), c(240,80), c(0,80)))) 134s > pt = st_point(c(0,90)) 134s > x = st_sfc(pole, pt, crs = 4326) 134s > st_geod_covers(x[c(1,1,1)], x[c(2,2,2,2)]) 134s Sparse geometry binary predicate list of length 3, where the predicate 134s was `covers' 134s 1: 1, 2, 3, 4 134s 2: 1, 2, 3, 4 134s 3: 1, 2, 3, 4 134s > st_geod_covered_by(x[c(2,2)], x[c(1,1,1)]) 134s Sparse geometry binary predicate list of length 2, where the predicate 134s was `covered_by' 134s 1: 1, 2, 3 134s 2: 1, 2, 3 134s > st_geod_covers(x[c(1,1,1)], x[c(2,2,2,2)], sparse = FALSE) 134s [,1] [,2] [,3] [,4] 134s [1,] TRUE TRUE TRUE TRUE 134s [2,] TRUE TRUE TRUE TRUE 134s [3,] TRUE TRUE TRUE TRUE 134s > st_geod_covered_by(x[c(2,2)], x[c(1,1,1)], sparse = FALSE) 134s [,1] [,2] [,3] 134s [1,] TRUE TRUE TRUE 134s [2,] TRUE TRUE TRUE 134s > 134s > # box crossing the dateline: 134s > #box = st_polygon(list(rbind(c(179.5,0), c(179.5,1), c(-179.5,1), c(-179.5,0), c(179.5,0)))) 134s > box = st_polygon(list(rbind(c(179.5,0.1), c(179.5,1), c(-179.5,1), c(-179.5,0.1), c(179.5,0.1)))) 134s > b = st_sfc(box, crs = 4326) 134s > units::set_units(st_geod_area(b), km^2) # approx 111^2 134s 11077.84 [km^2] 134s > 134s > pt = st_point(c(30, 70)) 134s > x = st_sfc(pole, pt, pt, crs = 4326) 134s > st_geod_distance(x, x) 134s Units: [m] 134s [,1] [,2] [,3] 134s [1,] 0 1378923 1378923 134s [2,] 1378923 0 0 134s [3,] 1378923 0 0 134s > st_geod_distance(x, x, sparse = TRUE) 134s Sparse geometry binary predicate list of length 3, where the predicate 134s was `st_is_within_distance' 134s 1: 1 134s 2: 2, 3 134s 3: 2, 3 134s > st_geod_distance(x, x, tolerance = 1, sparse = TRUE) 134s Sparse geometry binary predicate list of length 3, where the predicate 134s was `st_is_within_distance' 134s 1: 1 134s 2: 2, 3 134s 3: 2, 3 134s > 134s BEGIN TEST perimeter.R 134s 134s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 134s Copyright (C) 2024 The R Foundation for Statistical Computing 134s Platform: x86_64-pc-linux-gnu 134s 134s R is free software and comes with ABSOLUTELY NO WARRANTY. 134s You are welcome to redistribute it under certain conditions. 134s Type 'license()' or 'licence()' for distribution details. 134s 134s R is a collaborative project with many contributors. 134s Type 'contributors()' for more information and 134s 'citation()' on how to cite R or R packages in publications. 134s 134s Type 'demo()' for some demos, 'help()' for on-line help, or 134s 'help.start()' for an HTML browser interface to help. 134s Type 'q()' to quit R. 134s 135s > suppressPackageStartupMessages(library(lwgeom)) 135s Warning messages: 135s 1: In fun(libname, pkgname) : 135s GEOS versions differ: lwgeom has 3.12.1 sf has 3.12.2 135s 2: In fun(libname, pkgname) : 135s PROJ versions differ: lwgeom has 9.4.0 sf has 9.5.0 135s > suppressPackageStartupMessages(library(sf)) 135s > nc = st_read(system.file("gpkg/nc.gpkg", package="sf"), quiet = TRUE) 135s > nc = st_transform(nc, 3857) 135s > st_perimeter(nc)[1:5] 135s Error: 'st_perimeter_lwgeom' is not an exported object from 'namespace:lwgeom' 135s Execution halted 135s autopkgtest [20:51:34]: test run-unit-test: -----------------------] 136s run-unit-test FAIL non-zero exit status 1 136s autopkgtest [20:51:35]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 136s autopkgtest [20:51:35]: test pkg-r-autopkgtest: preparing testbed 139s Reading package lists... 139s Building dependency tree... 139s Reading state information... 139s Starting pkgProblemResolver with broken count: 0 139s Starting 2 pkgProblemResolver with broken count: 0 139s Done 139s The following additional packages will be installed: 139s build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu 139s dctrl-tools g++ g++-14 g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc 139s gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-14 139s gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools libasan8 139s libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev 139s libgfortran-14-dev libhwasan0 libicu-dev libisl23 libitm1 libjpeg-dev 139s libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 liblzma-dev libmpc3 139s libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 139s libpkgconf3 libpng-dev libquadmath0 libreadline-dev libstdc++-14-dev 139s libtirpc-dev libtsan2 libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin 139s r-base-dev zlib1g-dev 139s Suggested packages: 139s cpp-doc gcc-14-locales cpp-14-doc debtags g++-multilib g++-14-multilib 139s gcc-14-doc gcc-multilib manpages-dev autoconf automake libtool flex bison 139s gdb gcc-doc gcc-14-multilib gdb-x86-64-linux-gnu gfortran-multilib 139s gfortran-doc gfortran-14-multilib gfortran-14-doc libcoarrays-dev 139s liblapack-doc icu-doc liblzma-doc ncurses-doc readline-doc libstdc++-14-doc 139s texlive-base texlive-latex-base texlive-plain-generic 139s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils 139s texlive-latex-recommended texlive-latex-extra texinfo 139s Recommended packages: 139s bzip2-doc libpng-tools 139s The following NEW packages will be installed: 139s autopkgtest-satdep build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu 139s cpp-x86-64-linux-gnu dctrl-tools g++ g++-14 g++-14-x86-64-linux-gnu 139s g++-x86-64-linux-gnu gcc gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu 139s gfortran gfortran-14 gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu 139s icu-devtools libasan8 libblas-dev libbz2-dev libcc1-0 libdeflate-dev 139s libgcc-14-dev libgfortran-14-dev libhwasan0 libicu-dev libisl23 libitm1 139s libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 139s liblzma-dev libmpc3 libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev 139s libpcre2-posix3 libpkgconf3 libpng-dev libquadmath0 libreadline-dev 139s libstdc++-14-dev libtirpc-dev libtsan2 libubsan1 pkg-r-autopkgtest pkgconf 139s pkgconf-bin r-base-dev zlib1g-dev 139s 0 upgraded, 56 newly installed, 0 to remove and 0 not upgraded. 139s Need to get 100 MB/100 MB of archives. 139s After this operation, 355 MB of additional disk space will be used. 139s Get:1 /tmp/autopkgtest.c9nj1U/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [744 B] 140s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 140s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 140s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-8ubuntu1 [11.9 MB] 141s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-8ubuntu1 [1030 B] 141s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [5452 B] 141s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.1.0-2ubuntu1 [22.4 kB] 141s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 14.2.0-8ubuntu1 [47.6 kB] 141s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 14.2.0-8ubuntu1 [29.1 kB] 141s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 14.2.0-8ubuntu1 [2998 kB] 141s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 14.2.0-8ubuntu1 [1317 kB] 141s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 14.2.0-8ubuntu1 [2732 kB] 141s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 14.2.0-8ubuntu1 [1177 kB] 141s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 14.2.0-8ubuntu1 [1634 kB] 142s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 14.2.0-8ubuntu1 [153 kB] 142s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-8ubuntu1 [2814 kB] 142s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-8ubuntu1 [23.3 MB] 144s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-8ubuntu1 [528 kB] 144s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1214 B] 144s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.1.0-2ubuntu1 [5000 B] 144s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-8ubuntu1 [2504 kB] 144s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-8ubuntu1 [13.3 MB] 145s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-8ubuntu1 [19.9 kB] 145s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [966 B] 145s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.1.0-2ubuntu1 [1100 B] 145s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 145s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 dctrl-tools amd64 2.24-3build3 [106 kB] 146s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran-14-dev amd64 14.2.0-8ubuntu1 [965 kB] 146s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-8ubuntu1 [12.5 MB] 147s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14 amd64 14.2.0-8ubuntu1 [11.9 kB] 147s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1022 B] 147s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran amd64 4:14.1.0-2ubuntu1 [1172 B] 147s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 icu-devtools amd64 74.2-1ubuntu4 [213 kB] 147s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas-dev amd64 3.12.0-3build2 [172 kB] 147s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libbz2-dev amd64 1.0.8-6 [33.8 kB] 147s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate-dev amd64 1.22-1 [72.2 kB] 147s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libicu-dev amd64 74.2-1ubuntu4 [11.9 MB] 148s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8-dev amd64 2.1.5-3ubuntu2 [324 kB] 148s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 148s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 148s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack-dev amd64 3.12.0-3build2 [5249 kB] 149s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses-dev amd64 6.5-2 [384 kB] 149s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.42-4ubuntu3 [214 kB] 149s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-32-0 amd64 10.42-4ubuntu3 [201 kB] 149s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-posix3 amd64 10.42-4ubuntu3 [6768 B] 149s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-dev amd64 10.42-4ubuntu3 [747 kB] 149s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libpkgconf3 amd64 1.8.1-4 [32.3 kB] 149s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 149s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libpng-dev amd64 1.6.44-2 [300 kB] 149s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libreadline-dev amd64 8.2-5 [169 kB] 149s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma-dev amd64 5.6.2-2 [176 kB] 149s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf-bin amd64 1.8.1-4 [21.6 kB] 149s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf amd64 1.8.1-4 [16.8 kB] 149s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3 [193 kB] 149s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-dev all 4.4.2-1 [4340 B] 149s Get:56 http://ftpmaster.internal/ubuntu plucky/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 149s Fetched 100 MB in 10s (10.3 MB/s) 149s Selecting previously unselected package libisl23:amd64. 149s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84782 files and directories currently installed.) 149s Preparing to unpack .../00-libisl23_0.27-1_amd64.deb ... 149s Unpacking libisl23:amd64 (0.27-1) ... 149s Selecting previously unselected package libmpc3:amd64. 149s Preparing to unpack .../01-libmpc3_1.3.1-1build2_amd64.deb ... 149s Unpacking libmpc3:amd64 (1.3.1-1build2) ... 149s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 149s Preparing to unpack .../02-cpp-14-x86-64-linux-gnu_14.2.0-8ubuntu1_amd64.deb ... 149s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ... 150s Selecting previously unselected package cpp-14. 150s Preparing to unpack .../03-cpp-14_14.2.0-8ubuntu1_amd64.deb ... 150s Unpacking cpp-14 (14.2.0-8ubuntu1) ... 150s Selecting previously unselected package cpp-x86-64-linux-gnu. 150s Preparing to unpack .../04-cpp-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 150s Unpacking cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 150s Selecting previously unselected package cpp. 150s Preparing to unpack .../05-cpp_4%3a14.1.0-2ubuntu1_amd64.deb ... 150s Unpacking cpp (4:14.1.0-2ubuntu1) ... 150s Selecting previously unselected package libcc1-0:amd64. 150s Preparing to unpack .../06-libcc1-0_14.2.0-8ubuntu1_amd64.deb ... 150s Unpacking libcc1-0:amd64 (14.2.0-8ubuntu1) ... 150s Selecting previously unselected package libitm1:amd64. 150s Preparing to unpack .../07-libitm1_14.2.0-8ubuntu1_amd64.deb ... 150s Unpacking libitm1:amd64 (14.2.0-8ubuntu1) ... 150s Selecting previously unselected package libasan8:amd64. 150s Preparing to unpack .../08-libasan8_14.2.0-8ubuntu1_amd64.deb ... 150s Unpacking libasan8:amd64 (14.2.0-8ubuntu1) ... 150s Selecting previously unselected package liblsan0:amd64. 150s Preparing to unpack .../09-liblsan0_14.2.0-8ubuntu1_amd64.deb ... 150s Unpacking liblsan0:amd64 (14.2.0-8ubuntu1) ... 150s Selecting previously unselected package libtsan2:amd64. 150s Preparing to unpack .../10-libtsan2_14.2.0-8ubuntu1_amd64.deb ... 150s Unpacking libtsan2:amd64 (14.2.0-8ubuntu1) ... 150s Selecting previously unselected package libubsan1:amd64. 150s Preparing to unpack .../11-libubsan1_14.2.0-8ubuntu1_amd64.deb ... 150s Unpacking libubsan1:amd64 (14.2.0-8ubuntu1) ... 150s Selecting previously unselected package libhwasan0:amd64. 150s Preparing to unpack .../12-libhwasan0_14.2.0-8ubuntu1_amd64.deb ... 150s Unpacking libhwasan0:amd64 (14.2.0-8ubuntu1) ... 150s Selecting previously unselected package libquadmath0:amd64. 150s Preparing to unpack .../13-libquadmath0_14.2.0-8ubuntu1_amd64.deb ... 150s Unpacking libquadmath0:amd64 (14.2.0-8ubuntu1) ... 150s Selecting previously unselected package libgcc-14-dev:amd64. 150s Preparing to unpack .../14-libgcc-14-dev_14.2.0-8ubuntu1_amd64.deb ... 150s Unpacking libgcc-14-dev:amd64 (14.2.0-8ubuntu1) ... 150s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 150s Preparing to unpack .../15-gcc-14-x86-64-linux-gnu_14.2.0-8ubuntu1_amd64.deb ... 150s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ... 150s Selecting previously unselected package gcc-14. 150s Preparing to unpack .../16-gcc-14_14.2.0-8ubuntu1_amd64.deb ... 150s Unpacking gcc-14 (14.2.0-8ubuntu1) ... 150s Selecting previously unselected package gcc-x86-64-linux-gnu. 150s Preparing to unpack .../17-gcc-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 150s Unpacking gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 150s Selecting previously unselected package gcc. 150s Preparing to unpack .../18-gcc_4%3a14.1.0-2ubuntu1_amd64.deb ... 150s Unpacking gcc (4:14.1.0-2ubuntu1) ... 150s Selecting previously unselected package libstdc++-14-dev:amd64. 150s Preparing to unpack .../19-libstdc++-14-dev_14.2.0-8ubuntu1_amd64.deb ... 150s Unpacking libstdc++-14-dev:amd64 (14.2.0-8ubuntu1) ... 151s Selecting previously unselected package g++-14-x86-64-linux-gnu. 151s Preparing to unpack .../20-g++-14-x86-64-linux-gnu_14.2.0-8ubuntu1_amd64.deb ... 151s Unpacking g++-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ... 151s Selecting previously unselected package g++-14. 151s Preparing to unpack .../21-g++-14_14.2.0-8ubuntu1_amd64.deb ... 151s Unpacking g++-14 (14.2.0-8ubuntu1) ... 151s Selecting previously unselected package g++-x86-64-linux-gnu. 151s Preparing to unpack .../22-g++-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 151s Unpacking g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 151s Selecting previously unselected package g++. 151s 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.../28-gfortran-14_14.2.0-8ubuntu1_amd64.deb ... 151s Unpacking gfortran-14 (14.2.0-8ubuntu1) ... 151s Selecting previously unselected package gfortran-x86-64-linux-gnu. 151s Preparing to unpack .../29-gfortran-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 151s Unpacking gfortran-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 151s Selecting previously unselected package gfortran. 151s Preparing to unpack .../30-gfortran_4%3a14.1.0-2ubuntu1_amd64.deb ... 151s Unpacking gfortran (4:14.1.0-2ubuntu1) ... 151s Selecting previously unselected package icu-devtools. 151s Preparing to unpack .../31-icu-devtools_74.2-1ubuntu4_amd64.deb ... 151s Unpacking icu-devtools (74.2-1ubuntu4) ... 151s Selecting previously unselected package libblas-dev:amd64. 151s Preparing to unpack .../32-libblas-dev_3.12.0-3build2_amd64.deb ... 151s Unpacking libblas-dev:amd64 (3.12.0-3build2) ... 151s Selecting previously unselected package libbz2-dev:amd64. 151s Preparing to unpack .../33-libbz2-dev_1.0.8-6_amd64.deb ... 151s Unpacking libbz2-dev:amd64 (1.0.8-6) ... 151s Selecting previously unselected package libdeflate-dev:amd64. 151s Preparing to unpack .../34-libdeflate-dev_1.22-1_amd64.deb ... 151s Unpacking libdeflate-dev:amd64 (1.22-1) ... 151s Selecting previously unselected package libicu-dev:amd64. 151s Preparing to unpack .../35-libicu-dev_74.2-1ubuntu4_amd64.deb ... 151s Unpacking libicu-dev:amd64 (74.2-1ubuntu4) ... 152s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 152s Preparing to unpack .../36-libjpeg-turbo8-dev_2.1.5-3ubuntu2_amd64.deb ... 152s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-3ubuntu2) ... 152s Selecting previously unselected package libjpeg8-dev:amd64. 152s Preparing to unpack .../37-libjpeg8-dev_8c-2ubuntu11_amd64.deb ... 152s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu11) ... 152s Selecting previously unselected package libjpeg-dev:amd64. 152s Preparing to unpack .../38-libjpeg-dev_8c-2ubuntu11_amd64.deb ... 152s Unpacking libjpeg-dev:amd64 (8c-2ubuntu11) ... 152s Selecting previously unselected package liblapack-dev:amd64. 152s Preparing to unpack .../39-liblapack-dev_3.12.0-3build2_amd64.deb ... 152s Unpacking liblapack-dev:amd64 (3.12.0-3build2) ... 152s Selecting previously unselected package libncurses-dev:amd64. 152s Preparing to unpack .../40-libncurses-dev_6.5-2_amd64.deb ... 152s Unpacking libncurses-dev:amd64 (6.5-2) ... 152s Selecting previously unselected package libpcre2-16-0:amd64. 152s Preparing to unpack .../41-libpcre2-16-0_10.42-4ubuntu3_amd64.deb ... 152s Unpacking libpcre2-16-0:amd64 (10.42-4ubuntu3) ... 152s Selecting previously unselected package libpcre2-32-0:amd64. 152s Preparing to unpack .../42-libpcre2-32-0_10.42-4ubuntu3_amd64.deb ... 152s Unpacking libpcre2-32-0:amd64 (10.42-4ubuntu3) ... 152s Selecting previously unselected package libpcre2-posix3:amd64. 152s Preparing to unpack .../43-libpcre2-posix3_10.42-4ubuntu3_amd64.deb ... 152s Unpacking libpcre2-posix3:amd64 (10.42-4ubuntu3) ... 152s 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152s Setting up libhwasan0:amd64 (14.2.0-8ubuntu1) ... 152s Setting up libasan8:amd64 (14.2.0-8ubuntu1) ... 152s Setting up libtsan2:amd64 (14.2.0-8ubuntu1) ... 152s Setting up libjpeg8-dev:amd64 (8c-2ubuntu11) ... 152s Setting up libisl23:amd64 (0.27-1) ... 152s Setting up libdeflate-dev:amd64 (1.22-1) ... 152s Setting up libicu-dev:amd64 (74.2-1ubuntu4) ... 152s Setting up libcc1-0:amd64 (14.2.0-8ubuntu1) ... 152s Setting up liblsan0:amd64 (14.2.0-8ubuntu1) ... 152s Setting up libblas-dev:amd64 (3.12.0-3build2) ... 152s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode 152s Setting up dctrl-tools (2.24-3build3) ... 152s Setting up libitm1:amd64 (14.2.0-8ubuntu1) ... 152s Setting up libbz2-dev:amd64 (1.0.8-6) ... 152s Setting up libpcre2-dev:amd64 (10.42-4ubuntu3) ... 152s Setting up libpng-dev:amd64 (1.6.44-2) ... 152s Setting up libjpeg-dev:amd64 (8c-2ubuntu11) ... 152s Setting up pkgconf:amd64 (1.8.1-4) ... 152s Setting up liblapack-dev:amd64 (3.12.0-3build2) ... 152s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode 152s Setting up cpp-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ... 152s Setting up cpp-14 (14.2.0-8ubuntu1) ... 152s Setting up libgcc-14-dev:amd64 (14.2.0-8ubuntu1) ... 152s Setting up libstdc++-14-dev:amd64 (14.2.0-8ubuntu1) ... 152s Setting up cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 152s Setting up libgfortran-14-dev:amd64 (14.2.0-8ubuntu1) ... 152s Setting up cpp (4:14.1.0-2ubuntu1) ... 152s Setting up gcc-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ... 152s Setting up gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 152s Setting up gcc-14 (14.2.0-8ubuntu1) ... 152s Setting up gfortran-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ... 152s Setting up g++-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ... 152s Setting up g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 152s Setting up g++-14 (14.2.0-8ubuntu1) ... 152s Setting up gfortran-14 (14.2.0-8ubuntu1) ... 152s Setting up gfortran-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 152s Setting up gcc (4:14.1.0-2ubuntu1) ... 152s Setting up g++ (4:14.1.0-2ubuntu1) ... 152s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 152s Setting up build-essential (12.10ubuntu1) ... 152s Setting up gfortran (4:14.1.0-2ubuntu1) ... 152s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 152s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 152s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 152s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 152s Setting up r-base-dev (4.4.2-1) ... 152s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 152s Setting up autopkgtest-satdep (0) ... 152s Processing triggers for man-db (2.13.0-1) ... 153s Processing triggers for install-info (7.1.1-1) ... 153s Processing triggers for libc-bin (2.40-1ubuntu3) ... 155s (Reading database ... 86882 files and directories currently installed.) 155s Removing autopkgtest-satdep (0) ... 156s autopkgtest [20:51:55]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 156s autopkgtest [20:51:55]: test pkg-r-autopkgtest: [----------------------- 156s Test: Try to load the R library lwgeom 156s 156s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 156s Copyright (C) 2024 The R Foundation for Statistical Computing 156s Platform: x86_64-pc-linux-gnu 156s 156s R is free software and comes with ABSOLUTELY NO WARRANTY. 156s You are welcome to redistribute it under certain conditions. 156s Type 'license()' or 'licence()' for distribution details. 156s 156s R is a collaborative project with many contributors. 156s Type 'contributors()' for more information and 156s 'citation()' on how to cite R or R packages in publications. 156s 156s Type 'demo()' for some demos, 'help()' for on-line help, or 156s 'help.start()' for an HTML browser interface to help. 156s Type 'q()' to quit R. 156s 156s > library('lwgeom') 156s Linking to liblwgeom 3.0.0beta1 r16016, GEOS 3.12.1, PROJ 9.4.0 156s Warning messages: 156s 1: In fun(libname, pkgname) : 156s GEOS versions differ: lwgeom has 3.12.1 sf has 3.12.2 156s 2: In fun(libname, pkgname) : 156s PROJ versions differ: lwgeom has 9.4.0 sf has 9.5.0 156s > 156s > 156s Other tests are currently unsupported! 156s They will be progressively added. 157s autopkgtest [20:51:56]: test pkg-r-autopkgtest: -----------------------] 157s pkg-r-autopkgtest PASS 157s autopkgtest [20:51:56]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 157s autopkgtest [20:51:56]: @@@@@@@@@@@@@@@@@@@@ summary 157s run-unit-test FAIL non-zero exit status 1 157s pkg-r-autopkgtest PASS 162s nova [W] Skipping flock for amd64 162s Creating nova instance adt-plucky-amd64-r-cran-lwgeom-20241123-204919-juju-7f2275-prod-proposed-migration-environment-15-6fc6f9b0-de8e-4d84-8ce8-99db7b7908cf from image adt/ubuntu-plucky-amd64-server-20241119.img (UUID 2e5306de-7efa-448c-bc27-5518979e66f0)...