0s autopkgtest [16:04:55]: starting date and time: 2024-11-09 16:04:55+0000 0s autopkgtest [16:04:55]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [16:04:55]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.lzt3jmux/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-sf --apt-upgrade r-cran-lwgeom --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-sf/1.0-17+dfsg-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-32.secgroup --name adt-plucky-amd64-r-cran-lwgeom-20241109-160455-juju-7f2275-prod-proposed-migration-environment-15-44f6f70f-b677-45e9-8781-4e5c3ddc0cf2 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 38s autopkgtest [16:05:33]: testbed dpkg architecture: amd64 38s autopkgtest [16:05:33]: testbed apt version: 2.9.8 38s autopkgtest [16:05:33]: @@@@@@@@@@@@@@@@@@@@ test bed setup 39s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 39s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [104 kB] 39s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB] 39s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 39s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [998 kB] 40s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [106 kB] 40s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [156 kB] 40s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [32.6 kB] 40s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [748 kB] 40s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [327 kB] 40s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [37.7 kB] 40s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [13.0 kB] 40s Fetched 2618 kB in 1s (2654 kB/s) 40s Reading package lists... 42s Reading package lists... 42s Building dependency tree... 42s Reading state information... 43s Calculating upgrade... 43s The following NEW packages will be installed: 43s systemd-cryptsetup 43s The following packages will be upgraded: 43s base-passwd bash-completion libattr1 libbpf1 libbsd0 libbytesize-common 43s libbytesize1 libdrm-common libdrm2 libjson-glib-1.0-0 43s libjson-glib-1.0-common libmaxminddb0 libmnl0 libnghttp2-14 libnspr4 43s libnss-systemd libpam-systemd libpython3.12-minimal libpython3.12-stdlib 43s libpython3.12t64 libsystemd-shared libsystemd0 libudev1 libudisks2-0 43s liburcu8t64 linux-firmware openssh-client openssh-server openssh-sftp-server 43s pci.ids python3-gi python3-idna python3-jsonpatch python3-lazr.restfulclient 43s python3-urllib3 python3-wadllib python3.12 python3.12-gdbm 43s python3.12-minimal systemd systemd-resolved systemd-sysv systemd-timesyncd 43s udev udisks2 usbutils 43s 46 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 43s Need to get 558 MB of archives. 43s After this operation, 29.4 MB of additional disk space will be used. 43s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 base-passwd amd64 3.6.5 [53.4 kB] 44s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.12t64 amd64 3.12.7-2 [2372 kB] 44s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12 amd64 3.12.7-2 [661 kB] 44s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.12-stdlib amd64 3.12.7-2 [2079 kB] 44s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12-minimal amd64 3.12.7-2 [2345 kB] 44s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.12-minimal amd64 3.12.7-2 [836 kB] 44s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libnss-systemd amd64 256.5-2ubuntu4 [191 kB] 44s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-timesyncd amd64 256.5-2ubuntu4 [40.8 kB] 44s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-resolved amd64 256.5-2ubuntu4 [339 kB] 44s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd-shared amd64 256.5-2ubuntu4 [2289 kB] 44s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd0 amd64 256.5-2ubuntu4 [511 kB] 45s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-sysv amd64 256.5-2ubuntu4 [11.9 kB] 45s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-systemd amd64 256.5-2ubuntu4 [288 kB] 45s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd amd64 256.5-2ubuntu4 [3587 kB] 45s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 udev amd64 256.5-2ubuntu4 [2081 kB] 45s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libudev1 amd64 256.5-2ubuntu4 [209 kB] 45s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-sftp-server amd64 1:9.7p1-7ubuntu5 [40.8 kB] 45s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-server amd64 1:9.7p1-7ubuntu5 [583 kB] 45s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-client amd64 1:9.7p1-7ubuntu5 [1027 kB] 45s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libattr1 amd64 1:2.5.2-2 [12.1 kB] 45s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libbsd0 amd64 0.12.2-2 [49.9 kB] 45s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libbpf1 amd64 1:1.4.6-1 [184 kB] 45s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libmnl0 amd64 1.0.5-3 [12.6 kB] 45s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-3 [250 kB] 45s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 bash-completion all 1:2.14.0-2 [210 kB] 45s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libdrm-common all 2.4.123-1 [8436 B] 45s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libdrm2 amd64 2.4.123-1 [43.7 kB] 45s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libmaxminddb0 amd64 1.11.0-1 [19.9 kB] 45s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libnghttp2-14 amd64 1.64.0-1 [80.7 kB] 45s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 liburcu8t64 amd64 0.14.1-1 [68.6 kB] 45s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 pci.ids all 0.0~2024.10.24-1 [279 kB] 45s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12-gdbm amd64 3.12.7-2 [30.4 kB] 45s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 usbutils amd64 1:018-1 [84.5 kB] 45s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libbytesize1 amd64 2.11-1ubuntu1 [14.0 kB] 45s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libbytesize-common all 2.11-1ubuntu1 [3584 B] 45s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libjson-glib-1.0-common all 1.10.0+ds-2 [5502 B] 45s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libjson-glib-1.0-0 amd64 1.10.0+ds-2 [72.8 kB] 45s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libnspr4 amd64 2:4.35-1.1ubuntu2 [118 kB] 45s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 udisks2 amd64 2.10.1-11ubuntu1 [326 kB] 45s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libudisks2-0 amd64 2.10.1-11ubuntu1 [176 kB] 45s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-firmware amd64 20241108.git3bbb13a7-0ubuntu1 [536 MB] 70s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-idna all 3.8-2 [47.0 kB] 70s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jsonpatch all 1.32-4 [12.2 kB] 70s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-wadllib all 2.0.0-1 [36.7 kB] 70s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lazr.restfulclient all 0.14.6-2 [50.9 kB] 70s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-urllib3 all 2.0.7-2ubuntu0.1 [93.1 kB] 70s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-cryptsetup amd64 256.5-2ubuntu4 [120 kB] 70s Preconfiguring packages ... 70s Fetched 558 MB in 27s (20.4 MB/s) 71s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75312 files and directories currently installed.) 71s Preparing to unpack .../base-passwd_3.6.5_amd64.deb ... 71s Unpacking base-passwd (3.6.5) over (3.6.4) ... 71s Setting up base-passwd (3.6.5) ... 71s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75313 files and directories currently installed.) 71s Preparing to unpack .../0-libpython3.12t64_3.12.7-2_amd64.deb ... 71s Unpacking libpython3.12t64:amd64 (3.12.7-2) over (3.12.7-1) ... 71s Preparing to unpack .../1-python3.12_3.12.7-2_amd64.deb ... 71s Unpacking python3.12 (3.12.7-2) over (3.12.7-1) ... 71s Preparing to unpack .../2-libpython3.12-stdlib_3.12.7-2_amd64.deb ... 71s Unpacking libpython3.12-stdlib:amd64 (3.12.7-2) over (3.12.7-1) ... 71s Preparing to unpack .../3-python3.12-minimal_3.12.7-2_amd64.deb ... 71s Unpacking python3.12-minimal (3.12.7-2) over (3.12.7-1) ... 71s Preparing to unpack .../4-libpython3.12-minimal_3.12.7-2_amd64.deb ... 71s Unpacking libpython3.12-minimal:amd64 (3.12.7-2) over (3.12.7-1) ... 71s Preparing to unpack .../5-libnss-systemd_256.5-2ubuntu4_amd64.deb ... 71s Unpacking libnss-systemd:amd64 (256.5-2ubuntu4) over (256.5-2ubuntu3) ... 71s Preparing to unpack .../6-systemd-timesyncd_256.5-2ubuntu4_amd64.deb ... 71s Unpacking systemd-timesyncd (256.5-2ubuntu4) over (256.5-2ubuntu3) ... 72s Preparing to unpack .../7-systemd-resolved_256.5-2ubuntu4_amd64.deb ... 72s Unpacking systemd-resolved (256.5-2ubuntu4) over (256.5-2ubuntu3) ... 72s Preparing to unpack .../8-libsystemd-shared_256.5-2ubuntu4_amd64.deb ... 72s Unpacking libsystemd-shared:amd64 (256.5-2ubuntu4) over (256.5-2ubuntu3) ... 72s Preparing to unpack .../9-libsystemd0_256.5-2ubuntu4_amd64.deb ... 72s Unpacking libsystemd0:amd64 (256.5-2ubuntu4) over (256.5-2ubuntu3) ... 72s Setting up libsystemd0:amd64 (256.5-2ubuntu4) ... 72s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75313 files and directories currently installed.) 72s Preparing to unpack .../systemd-sysv_256.5-2ubuntu4_amd64.deb ... 72s Unpacking systemd-sysv (256.5-2ubuntu4) over (256.5-2ubuntu3) ... 72s Preparing to unpack .../libpam-systemd_256.5-2ubuntu4_amd64.deb ... 72s Unpacking libpam-systemd:amd64 (256.5-2ubuntu4) over (256.5-2ubuntu3) ... 72s Preparing to unpack .../systemd_256.5-2ubuntu4_amd64.deb ... 72s Unpacking systemd (256.5-2ubuntu4) over (256.5-2ubuntu3) ... 72s Preparing to unpack .../udev_256.5-2ubuntu4_amd64.deb ... 72s Unpacking udev (256.5-2ubuntu4) over (256.5-2ubuntu3) ... 72s Preparing to unpack .../libudev1_256.5-2ubuntu4_amd64.deb ... 72s Unpacking libudev1:amd64 (256.5-2ubuntu4) over (256.5-2ubuntu3) ... 72s Setting up libudev1:amd64 (256.5-2ubuntu4) ... 72s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75313 files and directories currently installed.) 72s Preparing to unpack .../openssh-sftp-server_1%3a9.7p1-7ubuntu5_amd64.deb ... 72s Unpacking openssh-sftp-server (1:9.7p1-7ubuntu5) over (1:9.7p1-7ubuntu4) ... 72s Preparing to unpack .../openssh-server_1%3a9.7p1-7ubuntu5_amd64.deb ... 72s Unpacking openssh-server (1:9.7p1-7ubuntu5) over (1:9.7p1-7ubuntu4) ... 72s Preparing to unpack .../openssh-client_1%3a9.7p1-7ubuntu5_amd64.deb ... 72s Unpacking openssh-client (1:9.7p1-7ubuntu5) over (1:9.7p1-7ubuntu4) ... 72s Preparing to unpack .../libattr1_1%3a2.5.2-2_amd64.deb ... 72s Unpacking libattr1:amd64 (1:2.5.2-2) over (1:2.5.2-1build2) ... 73s Setting up libattr1:amd64 (1:2.5.2-2) ... 73s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75313 files and directories currently installed.) 73s Preparing to unpack .../libbsd0_0.12.2-2_amd64.deb ... 73s Unpacking libbsd0:amd64 (0.12.2-2) over (0.12.2-1) ... 73s Setting up libbsd0:amd64 (0.12.2-2) ... 73s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75313 files and directories currently installed.) 73s Preparing to unpack .../00-libbpf1_1%3a1.4.6-1_amd64.deb ... 73s Unpacking libbpf1:amd64 (1:1.4.6-1) over (1:1.4.5-1) ... 73s Preparing to unpack .../01-libmnl0_1.0.5-3_amd64.deb ... 73s Unpacking libmnl0:amd64 (1.0.5-3) over (1.0.5-2build1) ... 73s Preparing to unpack .../02-python3-gi_3.50.0-3_amd64.deb ... 73s Unpacking python3-gi (3.50.0-3) over (3.48.2-1) ... 73s Preparing to unpack .../03-bash-completion_1%3a2.14.0-2_all.deb ... 73s Unpacking bash-completion (1:2.14.0-2) over (1:2.14.0-1) ... 73s Preparing to unpack .../04-libdrm-common_2.4.123-1_all.deb ... 73s Unpacking libdrm-common (2.4.123-1) over (2.4.122-1) ... 73s Preparing to unpack .../05-libdrm2_2.4.123-1_amd64.deb ... 73s Unpacking libdrm2:amd64 (2.4.123-1) over (2.4.122-1) ... 73s Preparing to unpack .../06-libmaxminddb0_1.11.0-1_amd64.deb ... 73s Unpacking libmaxminddb0:amd64 (1.11.0-1) over (1.10.0-1) ... 73s Preparing to unpack .../07-libnghttp2-14_1.64.0-1_amd64.deb ... 73s Unpacking libnghttp2-14:amd64 (1.64.0-1) over (1.62.1-2) ... 73s Preparing to unpack .../08-liburcu8t64_0.14.1-1_amd64.deb ... 73s Unpacking liburcu8t64:amd64 (0.14.1-1) over (0.14.0-4) ... 73s Preparing to unpack .../09-pci.ids_0.0~2024.10.24-1_all.deb ... 73s Unpacking pci.ids (0.0~2024.10.24-1) over (0.0~2024.09.12-1) ... 73s Preparing to unpack .../10-python3.12-gdbm_3.12.7-2_amd64.deb ... 73s Unpacking python3.12-gdbm (3.12.7-2) over (3.12.7-1) ... 73s Preparing to unpack .../11-usbutils_1%3a018-1_amd64.deb ... 73s Unpacking usbutils (1:018-1) over (1:017-3build1) ... 73s Preparing to unpack .../12-libbytesize1_2.11-1ubuntu1_amd64.deb ... 73s Unpacking libbytesize1:amd64 (2.11-1ubuntu1) over (2.10-1ubuntu2) ... 73s Preparing to unpack .../13-libbytesize-common_2.11-1ubuntu1_all.deb ... 73s Unpacking libbytesize-common (2.11-1ubuntu1) over (2.10-1ubuntu2) ... 73s Preparing to unpack .../14-libjson-glib-1.0-common_1.10.0+ds-2_all.deb ... 73s Unpacking libjson-glib-1.0-common (1.10.0+ds-2) over (1.8.0-2build2) ... 73s Preparing to unpack .../15-libjson-glib-1.0-0_1.10.0+ds-2_amd64.deb ... 73s Unpacking libjson-glib-1.0-0:amd64 (1.10.0+ds-2) over (1.8.0-2build2) ... 73s Preparing to unpack .../16-libnspr4_2%3a4.35-1.1ubuntu2_amd64.deb ... 73s Unpacking libnspr4:amd64 (2:4.35-1.1ubuntu2) over (2:4.35-1.1ubuntu1) ... 73s Preparing to unpack .../17-udisks2_2.10.1-11ubuntu1_amd64.deb ... 73s Unpacking udisks2 (2.10.1-11ubuntu1) over (2.10.1-9ubuntu2) ... 73s Preparing to unpack .../18-libudisks2-0_2.10.1-11ubuntu1_amd64.deb ... 73s Unpacking libudisks2-0:amd64 (2.10.1-11ubuntu1) over (2.10.1-9ubuntu2) ... 73s Preparing to unpack .../19-linux-firmware_20241108.git3bbb13a7-0ubuntu1_amd64.deb ... 73s Unpacking linux-firmware (20241108.git3bbb13a7-0ubuntu1) over (20240913.gita34e7a5f-0ubuntu2) ... 76s Preparing to unpack .../20-python3-idna_3.8-2_all.deb ... 76s Unpacking python3-idna (3.8-2) over (3.6-2.1) ... 76s Preparing to unpack .../21-python3-jsonpatch_1.32-4_all.deb ... 76s Unpacking python3-jsonpatch (1.32-4) over (1.32-3) ... 76s Preparing to unpack .../22-python3-wadllib_2.0.0-1_all.deb ... 76s Unpacking python3-wadllib (2.0.0-1) over (1.3.6-5) ... 76s Preparing to unpack .../23-python3-lazr.restfulclient_0.14.6-2_all.deb ... 76s Unpacking python3-lazr.restfulclient (0.14.6-2) over (0.14.6-1) ... 77s Preparing to unpack .../24-python3-urllib3_2.0.7-2ubuntu0.1_all.deb ... 77s Unpacking python3-urllib3 (2.0.7-2ubuntu0.1) over (2.0.7-2) ... 77s Selecting previously unselected package systemd-cryptsetup. 77s Preparing to unpack .../25-systemd-cryptsetup_256.5-2ubuntu4_amd64.deb ... 77s Unpacking systemd-cryptsetup (256.5-2ubuntu4) ... 77s Setting up liburcu8t64:amd64 (0.14.1-1) ... 77s Setting up pci.ids (0.0~2024.10.24-1) ... 77s Setting up linux-firmware (20241108.git3bbb13a7-0ubuntu1) ... 77s Setting up openssh-client (1:9.7p1-7ubuntu5) ... 77s Setting up libmaxminddb0:amd64 (1.11.0-1) ... 77s Setting up python3.12-gdbm (3.12.7-2) ... 77s Setting up python3-jsonpatch (1.32-4) ... 77s Setting up libpython3.12-minimal:amd64 (3.12.7-2) ... 77s Setting up libnghttp2-14:amd64 (1.64.0-1) ... 77s Setting up usbutils (1:018-1) ... 77s Setting up libnspr4:amd64 (2:4.35-1.1ubuntu2) ... 77s Setting up bash-completion (1:2.14.0-2) ... 77s Setting up python3-wadllib (2.0.0-1) ... 77s Setting up python3-gi (3.50.0-3) ... 77s Setting up libbytesize-common (2.11-1ubuntu1) ... 77s Setting up libmnl0:amd64 (1.0.5-3) ... 77s Setting up python3-idna (3.8-2) ... 77s Setting up libsystemd-shared:amd64 (256.5-2ubuntu4) ... 77s Setting up python3-urllib3 (2.0.7-2ubuntu0.1) ... 77s Setting up libjson-glib-1.0-common (1.10.0+ds-2) ... 77s Setting up libbytesize1:amd64 (2.11-1ubuntu1) ... 77s Setting up python3-lazr.restfulclient (0.14.6-2) ... 78s Setting up libdrm-common (2.4.123-1) ... 78s Setting up libbpf1:amd64 (1:1.4.6-1) ... 78s Setting up libudisks2-0:amd64 (2.10.1-11ubuntu1) ... 78s Setting up python3.12-minimal (3.12.7-2) ... 78s Setting up openssh-sftp-server (1:9.7p1-7ubuntu5) ... 78s Setting up libpython3.12-stdlib:amd64 (3.12.7-2) ... 78s Setting up openssh-server (1:9.7p1-7ubuntu5) ... 79s Setting up python3.12 (3.12.7-2) ... 80s Setting up systemd (256.5-2ubuntu4) ... 80s /usr/lib/tmpfiles.d/legacy.conf:13: Duplicate line for path "/run/lock", ignoring. 80s Created symlink '/run/systemd/system/tmp.mount' → '/dev/null'. 80s /usr/lib/tmpfiles.d/legacy.conf:13: Duplicate line for path "/run/lock", ignoring. 81s Setting up libjson-glib-1.0-0:amd64 (1.10.0+ds-2) ... 81s Setting up libpython3.12t64:amd64 (3.12.7-2) ... 81s Setting up systemd-cryptsetup (256.5-2ubuntu4) ... 81s Setting up systemd-timesyncd (256.5-2ubuntu4) ... 81s systemd-time-wait-sync.service is a disabled or a static unit not running, not starting it. 81s Setting up udev (256.5-2ubuntu4) ... 82s Setting up libdrm2:amd64 (2.4.123-1) ... 82s Setting up systemd-resolved (256.5-2ubuntu4) ... 82s Setting up udisks2 (2.10.1-11ubuntu1) ... 83s Setting up systemd-sysv (256.5-2ubuntu4) ... 83s Setting up libnss-systemd:amd64 (256.5-2ubuntu4) ... 83s Setting up libpam-systemd:amd64 (256.5-2ubuntu4) ... 83s Processing triggers for libc-bin (2.40-1ubuntu3) ... 83s Processing triggers for ufw (0.36.2-8) ... 83s Processing triggers for man-db (2.12.1-3) ... 84s Processing triggers for dbus (1.14.10-4ubuntu5) ... 84s Processing triggers for shared-mime-info (2.4-5) ... 85s Processing triggers for initramfs-tools (0.142ubuntu34) ... 85s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic 85s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 93s Reading package lists... 93s Building dependency tree... 93s Reading state information... 93s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 94s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 94s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 94s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 94s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 95s Reading package lists... 95s Reading package lists... 95s Building dependency tree... 95s Reading state information... 95s Calculating upgrade... 95s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 95s Reading package lists... 96s Building dependency tree... 96s Reading state information... 96s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 96s autopkgtest [16:06:31]: rebooting testbed after setup commands that affected boot 100s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 114s autopkgtest [16:06:49]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 13:41:20 UTC 2024 116s autopkgtest [16:06:51]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-lwgeom 118s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-lwgeom 0.2-13-3build2 (dsc) [2591 B] 118s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-lwgeom 0.2-13-3build2 (tar) [475 kB] 118s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-lwgeom 0.2-13-3build2 (diff) [4332 B] 118s gpgv: Signature made Mon Apr 1 07:22:26 2024 UTC 118s gpgv: using RSA key A089FB36AAFBDAD5ACC1325069F790171A210984 118s gpgv: Can't check signature: No public key 118s dpkg-source: warning: cannot verify inline signature for ./r-cran-lwgeom_0.2-13-3build2.dsc: no acceptable signature found 118s autopkgtest [16:06:53]: testing package r-cran-lwgeom version 0.2-13-3build2 119s autopkgtest [16:06:54]: build not needed 120s autopkgtest [16:06:55]: test run-unit-test: preparing testbed 121s Reading package lists... 121s Building dependency tree... 121s Reading state information... 122s Starting pkgProblemResolver with broken count: 0 122s Starting 2 pkgProblemResolver with broken count: 0 122s Done 122s The following additional packages will be installed: 122s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 122s fonts-glyphicons-halflings gdal-data gdal-plugins libaec0 libaom3 122s libarmadillo14 libarpack2t64 libblas3 libblosc1 libcairo2 libcfitsio10t64 122s libdatrie1 libde265-0 libdeflate0 libfontconfig1 libfreexl1 libfyba0t64 122s libgdal35 libgeos-c1t64 libgeos3.12.2 libgeotiff5 libgfortran5 libgif7 122s libgomp1 libgraphite2-3 libharfbuzz0b libhdf4-0-alt libhdf5-103-1t64 122s libhdf5-hl-100t64 libheif-plugin-aomdec libheif-plugin-libde265 libheif1 122s libice6 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap libkmlbase1t64 122s libkmldom1t64 libkmlengine1t64 liblapack3 liblcms2-2 liblerc4 libltdl7 122s libminizip1t64 libmysqlclient21 libnetcdf19t64 libodbc2 libodbcinst2 122s libogdi4.1 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 122s libpaper-utils libpaper1 libpixman-1-0 libpoppler140 libpq5 libproj25 122s libqhull-r8.0 librttopo1 libsharpyuv0 libsm6 libsnappy1v5 libspatialite8t64 122s libsuperlu6 libsz2 libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6 122s libudunits2-0 libudunits2-data liburiparser1 libwebp7 libxcb-render0 122s libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1 libxt6t64 littler 122s mysql-common node-html5shiv proj-data r-base-core r-cran-askpass r-cran-brio 122s r-cran-callr r-cran-class r-cran-classint r-cran-cli r-cran-covr 122s r-cran-crayon r-cran-curl r-cran-dbi r-cran-desc r-cran-diffobj 122s r-cran-digest r-cran-e1071 r-cran-evaluate r-cran-fansi r-cran-fs 122s r-cran-geosphere r-cran-glue r-cran-httr r-cran-jsonlite r-cran-kernsmooth 122s r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-littler r-cran-lwgeom 122s r-cran-magrittr r-cran-mass r-cran-mime r-cran-openssl r-cran-pillar 122s r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload 122s r-cran-praise r-cran-processx r-cran-proxy r-cran-ps r-cran-r6 r-cran-rcpp 122s r-cran-rematch2 r-cran-rex r-cran-rlang r-cran-rprojroot r-cran-s2 r-cran-sf 122s r-cran-sp r-cran-sys r-cran-testthat r-cran-tibble r-cran-units r-cran-utf8 122s r-cran-vctrs r-cran-waldo r-cran-withr r-cran-wk r-cran-yaml unixodbc-common 122s unzip x11-common xdg-utils zip 122s Suggested packages: 122s geotiff-bin gdal-bin libgeotiff-epsg libhdf4-alt-dev hdf4-tools 122s libheif-plugin-x265 libheif-plugin-ffmpegdec libheif-plugin-jpegdec 122s libheif-plugin-jpegenc libheif-plugin-j2kdec libheif-plugin-j2kenc 122s libheif-plugin-kvazaar libheif-plugin-rav1e libheif-plugin-svtenc 122s liblcms2-utils odbc-postgresql tdsodbc ogdi-bin proj-bin tcl8.6 tk8.6 nodejs 122s elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html r-cran-rstudioapi 122s r-cran-rmysql r-cran-knitr r-cran-rmarkdown r-cran-getopt r-cran-bit64 122s r-cran-dplyr r-cran-formattable r-cran-ggplot2 r-cran-nanotime 122s r-cran-palmerpenguins r-cran-scales r-cran-stringi r-cran-survival 122s r-cran-vdiffr r-cran-inline r-cran-hmisc r-cran-roxygen2 r-cran-rvest 122s r-cran-stringr r-cran-bench r-cran-blob r-cran-here r-cran-hms 122s r-cran-htmltools r-cran-purrr r-cran-tidyr 122s Recommended packages: 122s proj-bin libheif-plugin-aomenc poppler-data r-recommended r-base-dev 122s r-doc-html r-cran-mockery r-cran-spelling r-cran-spdata r-cran-knitr 122s r-cran-rmarkdown r-cran-tinytest r-cran-htmltools r-cran-htmlwidgets 122s r-cran-rstudioapi r-cran-whoami r-cran-dt r-cran-xml2 r-cran-memoise 122s r-cran-later r-cran-httpuv r-cran-webutils r-cran-gh r-cran-ggplot2 122s r-cran-unitizer r-cran-raster r-cran-dplyr r-cran-rsqlite r-cran-jpeg 122s r-cran-png r-cran-readr r-cran-r.rsp r-cran-lintr r-cran-tidyverse 122s r-cran-sodium r-cran-lubridate r-cran-cpp11 r-cran-bitops r-cran-mathjaxr 122s r-cran-remotes r-cran-usethis r-cran-codetools r-cran-webfakes r-cran-cba 122s r-cran-pingr r-cran-mockr r-cran-bit64 r-cran-blob r-cran-nanoarrow 122s r-cran-maps r-cran-matrix r-cran-microbenchmark r-cran-pbapply 122s r-cran-rpostgresql r-cran-spatstat r-cran-spatstat.geom 122s r-cran-spatstat.random r-cran-spatstat.linnet r-cran-spatstat.utils 122s r-cran-stars r-cran-terra r-cran-tidyr r-cran-tidyselect r-cran-rcolorbrewer 122s r-cran-gstat r-cran-deldir r-cran-shiny r-cran-data.table r-cran-formattable 122s r-cran-vdiffr r-cran-generics r-cran-pkgdown r-cran-zeallot r-cran-runit 122s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 122s x11-xserver-utils 122s The following NEW packages will be installed: 122s autopkgtest-satdep fontconfig fontconfig-config fonts-dejavu-core 122s fonts-dejavu-mono fonts-glyphicons-halflings gdal-data gdal-plugins libaec0 122s libaom3 libarmadillo14 libarpack2t64 libblas3 libblosc1 libcairo2 122s libcfitsio10t64 libdatrie1 libde265-0 libdeflate0 libfontconfig1 libfreexl1 122s libfyba0t64 libgdal35 libgeos-c1t64 libgeos3.12.2 libgeotiff5 libgfortran5 122s libgif7 libgomp1 libgraphite2-3 libharfbuzz0b libhdf4-0-alt libhdf5-103-1t64 122s libhdf5-hl-100t64 libheif-plugin-aomdec libheif-plugin-libde265 libheif1 122s libice6 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap libkmlbase1t64 122s libkmldom1t64 libkmlengine1t64 liblapack3 liblcms2-2 liblerc4 libltdl7 122s libminizip1t64 libmysqlclient21 libnetcdf19t64 libodbc2 libodbcinst2 122s libogdi4.1 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 122s libpaper-utils libpaper1 libpixman-1-0 libpoppler140 libpq5 libproj25 122s libqhull-r8.0 librttopo1 libsharpyuv0 libsm6 libsnappy1v5 libspatialite8t64 122s libsuperlu6 libsz2 libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6 122s libudunits2-0 libudunits2-data liburiparser1 libwebp7 libxcb-render0 122s libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1 libxt6t64 littler 122s mysql-common node-html5shiv proj-data r-base-core r-cran-askpass r-cran-brio 122s r-cran-callr r-cran-class r-cran-classint r-cran-cli r-cran-covr 122s r-cran-crayon r-cran-curl r-cran-dbi r-cran-desc r-cran-diffobj 122s r-cran-digest r-cran-e1071 r-cran-evaluate r-cran-fansi r-cran-fs 122s r-cran-geosphere r-cran-glue r-cran-httr r-cran-jsonlite r-cran-kernsmooth 122s r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-littler r-cran-lwgeom 122s r-cran-magrittr r-cran-mass r-cran-mime r-cran-openssl r-cran-pillar 122s r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload 122s r-cran-praise r-cran-processx r-cran-proxy r-cran-ps r-cran-r6 r-cran-rcpp 122s r-cran-rematch2 r-cran-rex r-cran-rlang r-cran-rprojroot r-cran-s2 r-cran-sf 122s r-cran-sp r-cran-sys r-cran-testthat r-cran-tibble r-cran-units r-cran-utf8 122s r-cran-vctrs r-cran-waldo r-cran-withr r-cran-wk r-cran-yaml unixodbc-common 122s unzip x11-common xdg-utils zip 122s 0 upgraded, 158 newly installed, 0 to remove and 0 not upgraded. 122s Need to get 105 MB/105 MB of archives. 122s After this operation, 256 MB of additional disk space will be used. 122s Get:1 /tmp/autopkgtest.pg3l8S/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [736 B] 122s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 123s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 123s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB] 123s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB] 123s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB] 123s Get:7 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 123s Get:8 http://ftpmaster.internal/ubuntu plucky/universe amd64 gdal-data all 3.9.1+dfsg-1build2 [269 kB] 123s Get:9 http://ftpmaster.internal/ubuntu plucky/universe amd64 gdal-plugins amd64 3.9.1+dfsg-1build2 [25.3 kB] 123s Get:10 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 123s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libaom3 amd64 3.11.0~rc1-1 [2762 kB] 124s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-3build2 [247 kB] 124s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-7ubuntu1 [909 kB] 124s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-3build2 [2668 kB] 125s Get:15 http://ftpmaster.internal/ubuntu plucky/universe amd64 libarpack2t64 amd64 3.9.1-1.1ubuntu1 [107 kB] 125s Get:16 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsuperlu6 amd64 6.0.1+dfsg1-1build3 [182 kB] 125s Get:17 http://ftpmaster.internal/ubuntu plucky/universe amd64 libarmadillo14 amd64 1:14.0.1+dfsg-2 [105 kB] 125s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 libsnappy1v5 amd64 1.2.1-1 [30.4 kB] 125s Get:19 http://ftpmaster.internal/ubuntu plucky/universe amd64 libblosc1 amd64 1.21.5+ds-1build1 [36.2 kB] 125s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-2 [427 kB] 125s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 125s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 125s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 125s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 125s Get:25 http://ftpmaster.internal/ubuntu plucky/universe amd64 libcfitsio10t64 amd64 4.4.1-2 [524 kB] 126s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 126s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libde265-0 amd64 1.0.15-1build4 [168 kB] 126s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.22-1 [64.5 kB] 126s Get:29 http://ftpmaster.internal/ubuntu plucky/universe amd64 libfyba0t64 amd64 4.1.1-11build1 [119 kB] 126s Get:30 http://ftpmaster.internal/ubuntu plucky/universe amd64 libminizip1t64 amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [22.9 kB] 126s Get:31 http://ftpmaster.internal/ubuntu plucky/universe amd64 libfreexl1 amd64 2.0.0-1build2 [41.7 kB] 126s Get:32 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeos3.12.2 amd64 3.12.2-1 [849 kB] 126s Get:33 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeos-c1t64 amd64 3.12.2-1 [94.4 kB] 126s Get:34 http://ftpmaster.internal/ubuntu plucky/universe amd64 proj-data all 9.4.1-1 [7892 kB] 129s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 129s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-2ubuntu2 [150 kB] 129s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 129s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-4ubuntu2 [179 kB] 129s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [17.5 kB] 129s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.4.0-0.1 [231 kB] 129s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 129s Get:42 http://ftpmaster.internal/ubuntu plucky/universe amd64 libproj25 amd64 9.4.1-1 [1398 kB] 130s Get:43 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeotiff5 amd64 1.7.3-1 [63.0 kB] 130s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libgif7 amd64 5.2.2-1ubuntu1 [35.2 kB] 130s Get:45 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 130s Get:46 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf4-0-alt amd64 4.3.0-1 [285 kB] 130s Get:47 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-103-1t64 amd64 1.10.10+repack-4ubuntu3 [1280 kB] 130s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif-plugin-aomdec amd64 1.18.1-2 [11.1 kB] 130s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif-plugin-libde265 amd64 1.18.1-2 [8758 B] 131s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif1 amd64 1.18.1-2 [293 kB] 131s Get:51 http://ftpmaster.internal/ubuntu plucky/universe amd64 liburiparser1 amd64 0.9.8+dfsg-1 [35.9 kB] 131s Get:52 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmlbase1t64 amd64 1.3.0-12build1 [49.9 kB] 131s Get:53 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmldom1t64 amd64 1.3.0-12build1 [156 kB] 131s Get:54 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmlengine1t64 amd64 1.3.0-12build1 [71.4 kB] 131s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 mysql-common all 5.8+1.1.1 [6800 B] 131s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libmysqlclient21 amd64 8.0.40-1 [1250 kB] 131s Get:57 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-4ubuntu3 [56.6 kB] 131s Get:58 http://ftpmaster.internal/ubuntu plucky/universe amd64 libnetcdf19t64 amd64 1:4.9.2-6ubuntu1 [472 kB] 131s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl7 amd64 2.4.7-7build1 [40.3 kB] 131s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libodbc2 amd64 2.3.12-1ubuntu1 [158 kB] 131s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 unixodbc-common all 2.3.12-1ubuntu1 [8796 B] 131s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libodbcinst2 amd64 2.3.12-1ubuntu1 [30.7 kB] 131s Get:63 http://ftpmaster.internal/ubuntu plucky/universe amd64 libogdi4.1 amd64 4.1.1+ds-5 [219 kB] 131s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libopenjp2-7 amd64 2.5.0-2ubuntu1 [184 kB] 131s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 liblcms2-2 amd64 2.14-2build1 [161 kB] 131s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libpoppler140 amd64 24.08.0-1 [1168 kB] 132s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libpq5 amd64 17.0-1 [249 kB] 132s Get:68 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqhull-r8.0 amd64 2020.2-6build1 [193 kB] 132s Get:69 http://ftpmaster.internal/ubuntu plucky/universe amd64 librttopo1 amd64 1.1.0-3build2 [191 kB] 132s Get:70 http://ftpmaster.internal/ubuntu plucky/universe amd64 libspatialite8t64 amd64 5.1.0-3build1 [1919 kB] 132s Get:71 http://ftpmaster.internal/ubuntu plucky/universe amd64 libxerces-c3.2t64 amd64 3.2.4+debian-1.3 [917 kB] 133s Get:72 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgdal35 amd64 3.9.1+dfsg-1build2 [9303 kB] 134s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-7ubuntu1 [148 kB] 135s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 135s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 9.0.0-1 [487 kB] 135s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 135s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 135s Get:78 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 135s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 135s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 135s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.54.0+ds-2 [235 kB] 135s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.54.0+ds-2 [49.1 kB] 135s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.54.0+ds-2 [28.8 kB] 135s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper1 amd64 1.1.29build1 [13.4 kB] 135s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 1.1.29build1 [8650 B] 135s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 135s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.14+dfsg-1build1 [988 kB] 135s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 135s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 135s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.14-1build1 [779 kB] 135s Get:91 http://ftpmaster.internal/ubuntu plucky/universe amd64 libudunits2-data all 2.2.28-7build1 [19.4 kB] 135s Get:92 http://ftpmaster.internal/ubuntu plucky/universe amd64 libudunits2-0 amd64 2.2.28-7build1 [54.1 kB] 135s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 135s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14 [174 kB] 135s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 135s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 135s Get:97 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.2-1 [28.9 MB] 140s Get:98 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-1 [96.0 kB] 140s Get:99 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-1 [2486 B] 140s Get:100 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 140s Get:101 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB] 140s Get:102 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB] 140s Get:103 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 140s Get:104 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ps amd64 1.8.0-1 [395 kB] 141s Get:105 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB] 141s Get:106 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-processx amd64 3.8.4-1 [353 kB] 141s Get:107 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 141s Get:108 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mass amd64 7.3-61-1 [1109 kB] 141s Get:109 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-class amd64 7.3-22-2build1 [88.2 kB] 141s Get:110 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB] 141s Get:111 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-e1071 amd64 1.7-16-1 [565 kB] 141s Get:112 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernsmooth amd64 2.23-24-1 [92.9 kB] 141s Get:113 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-classint amd64 0.4-10+dfsg-1 [106 kB] 141s Get:114 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.2-1 [1380 kB] 141s Get:115 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB] 141s Get:116 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.8.8+dfsg-1 [441 kB] 141s Get:117 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lazyeval amd64 0.2.2-1build1 [144 kB] 141s Get:118 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rex all 1.2.1-1 [129 kB] 141s Get:119 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-curl amd64 5.2.1+dfsg-1 [180 kB] 141s Get:120 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 142s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-openssl amd64 2.2.0+dfsg-1 [405 kB] 142s Get:122 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 142s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.2-1 [164 kB] 142s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.0+dfsg-1 [228 kB] 142s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.8-2 [108 kB] 142s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-covr amd64 3.6.4+dfsg-1 [303 kB] 142s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dbi all 1.2.3-1 [853 kB] 142s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 142s Get:129 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 142s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 0.24.0-1 [93.5 kB] 142s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 142s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.4+dfsg-1 [245 kB] 142s Get:133 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 142s Get:134 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.13-1 [1990 kB] 142s Get:135 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 142s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sp amd64 1:2.1-4+dfsg-1 [1472 kB] 142s Get:137 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-geosphere amd64 1.5-18-1 [1005 kB] 143s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.7.0-1 [154 kB] 143s Get:139 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.4-1 [1708 kB] 143s Get:140 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 143s Get:141 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-units amd64 0.8-5+dfsg-1 [275 kB] 143s Get:142 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 143s Get:143 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-wk amd64 0.9.4-1 [1791 kB] 143s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-s2 amd64 1.1.6-1build2 [1981 kB] 143s Get:145 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 r-cran-sf amd64 1.0-17+dfsg-1 [3278 kB] 143s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lwgeom amd64 0.2-13-3build2 [420 kB] 143s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 143s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 143s Get:149 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 143s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgbuild all 1.4.4-1 [212 kB] 143s Get:151 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 143s Get:152 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rprojroot all 2.0.4-1 [124 kB] 143s Get:153 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgload all 1.4.0-1 [247 kB] 143s Get:154 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 143s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-2 [415 kB] 143s Get:156 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 143s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-waldo all 0.5.3-1 [120 kB] 143s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-testthat amd64 3.2.1.1-1 [1636 kB] 144s Preconfiguring packages ... 144s Fetched 105 MB in 21s (4927 kB/s) 144s Selecting previously unselected package fonts-dejavu-mono. 144s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75551 files and directories currently installed.) 144s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8_all.deb ... 144s Unpacking fonts-dejavu-mono (2.37-8) ... 144s Selecting previously unselected package fonts-dejavu-core. 144s Preparing to unpack .../001-fonts-dejavu-core_2.37-8_all.deb ... 144s Unpacking fonts-dejavu-core (2.37-8) ... 144s Selecting previously unselected package fontconfig-config. 144s Preparing to unpack .../002-fontconfig-config_2.15.0-1.1ubuntu2_amd64.deb ... 144s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 144s Selecting previously unselected package libfontconfig1:amd64. 144s Preparing to unpack .../003-libfontconfig1_2.15.0-1.1ubuntu2_amd64.deb ... 144s Unpacking libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ... 144s Selecting previously unselected package fontconfig. 144s Preparing to unpack .../004-fontconfig_2.15.0-1.1ubuntu2_amd64.deb ... 144s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 144s Selecting previously unselected package fonts-glyphicons-halflings. 144s Preparing to unpack .../005-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 144s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 144s Selecting previously unselected package gdal-data. 144s Preparing to unpack .../006-gdal-data_3.9.1+dfsg-1build2_all.deb ... 144s Unpacking gdal-data (3.9.1+dfsg-1build2) ... 144s Selecting previously unselected package gdal-plugins:amd64. 144s Preparing to unpack .../007-gdal-plugins_3.9.1+dfsg-1build2_amd64.deb ... 144s Unpacking gdal-plugins:amd64 (3.9.1+dfsg-1build2) ... 144s Selecting previously unselected package libaec0:amd64. 145s Preparing to unpack .../008-libaec0_1.1.3-1_amd64.deb ... 145s Unpacking libaec0:amd64 (1.1.3-1) ... 145s Selecting previously unselected package libaom3:amd64. 145s Preparing to unpack .../009-libaom3_3.11.0~rc1-1_amd64.deb ... 145s Unpacking libaom3:amd64 (3.11.0~rc1-1) ... 145s Selecting previously unselected package libblas3:amd64. 145s Preparing to unpack .../010-libblas3_3.12.0-3build2_amd64.deb ... 145s Unpacking libblas3:amd64 (3.12.0-3build2) ... 145s Selecting previously unselected package libgfortran5:amd64. 145s Preparing to unpack .../011-libgfortran5_14.2.0-7ubuntu1_amd64.deb ... 145s Unpacking libgfortran5:amd64 (14.2.0-7ubuntu1) ... 145s Selecting previously unselected package liblapack3:amd64. 145s Preparing to unpack .../012-liblapack3_3.12.0-3build2_amd64.deb ... 145s Unpacking liblapack3:amd64 (3.12.0-3build2) ... 145s Selecting previously unselected package libarpack2t64:amd64. 145s Preparing to unpack .../013-libarpack2t64_3.9.1-1.1ubuntu1_amd64.deb ... 145s Unpacking libarpack2t64:amd64 (3.9.1-1.1ubuntu1) ... 145s Selecting previously unselected package libsuperlu6:amd64. 145s Preparing to unpack .../014-libsuperlu6_6.0.1+dfsg1-1build3_amd64.deb ... 145s Unpacking libsuperlu6:amd64 (6.0.1+dfsg1-1build3) ... 145s Selecting previously unselected package libarmadillo14. 145s Preparing to unpack .../015-libarmadillo14_1%3a14.0.1+dfsg-2_amd64.deb ... 145s Unpacking libarmadillo14 (1:14.0.1+dfsg-2) ... 145s Selecting previously unselected package libsnappy1v5:amd64. 145s Preparing to unpack .../016-libsnappy1v5_1.2.1-1_amd64.deb ... 145s Unpacking libsnappy1v5:amd64 (1.2.1-1) ... 145s Selecting previously unselected package libblosc1:amd64. 145s Preparing to unpack .../017-libblosc1_1.21.5+ds-1build1_amd64.deb ... 145s Unpacking libblosc1:amd64 (1.21.5+ds-1build1) ... 145s Selecting previously unselected package libpixman-1-0:amd64. 145s Preparing to unpack .../018-libpixman-1-0_0.44.0-2_amd64.deb ... 145s Unpacking libpixman-1-0:amd64 (0.44.0-2) ... 145s Selecting previously unselected package libxcb-render0:amd64. 145s Preparing to unpack .../019-libxcb-render0_1.17.0-2_amd64.deb ... 145s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 145s Selecting previously unselected package libxcb-shm0:amd64. 145s Preparing to unpack .../020-libxcb-shm0_1.17.0-2_amd64.deb ... 145s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 145s Selecting previously unselected package libxrender1:amd64. 145s Preparing to unpack .../021-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 145s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 145s Selecting previously unselected package libcairo2:amd64. 145s Preparing to unpack .../022-libcairo2_1.18.2-2_amd64.deb ... 145s Unpacking libcairo2:amd64 (1.18.2-2) ... 145s Selecting previously unselected package libcfitsio10t64:amd64. 145s Preparing to unpack .../023-libcfitsio10t64_4.4.1-2_amd64.deb ... 145s Unpacking libcfitsio10t64:amd64 (4.4.1-2) ... 145s Selecting previously unselected package libdatrie1:amd64. 145s Preparing to unpack .../024-libdatrie1_0.2.13-3build1_amd64.deb ... 145s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 145s Selecting previously unselected package libde265-0:amd64. 145s Preparing to unpack .../025-libde265-0_1.0.15-1build4_amd64.deb ... 145s Unpacking libde265-0:amd64 (1.0.15-1build4) ... 145s Selecting previously unselected package libdeflate0:amd64. 145s Preparing to unpack .../026-libdeflate0_1.22-1_amd64.deb ... 145s Unpacking libdeflate0:amd64 (1.22-1) ... 145s Selecting previously unselected package libfyba0t64:amd64. 145s Preparing to unpack .../027-libfyba0t64_4.1.1-11build1_amd64.deb ... 145s Unpacking libfyba0t64:amd64 (4.1.1-11build1) ... 145s Selecting previously unselected package libminizip1t64:amd64. 145s Preparing to unpack .../028-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ... 145s Unpacking libminizip1t64:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 145s Selecting previously unselected package libfreexl1:amd64. 145s Preparing to unpack .../029-libfreexl1_2.0.0-1build2_amd64.deb ... 145s Unpacking libfreexl1:amd64 (2.0.0-1build2) ... 145s Selecting previously unselected package libgeos3.12.2:amd64. 145s Preparing to unpack .../030-libgeos3.12.2_3.12.2-1_amd64.deb ... 145s Unpacking libgeos3.12.2:amd64 (3.12.2-1) ... 145s Selecting previously unselected package libgeos-c1t64:amd64. 145s Preparing to unpack .../031-libgeos-c1t64_3.12.2-1_amd64.deb ... 145s Unpacking libgeos-c1t64:amd64 (3.12.2-1) ... 145s Selecting previously unselected package proj-data. 145s Preparing to unpack .../032-proj-data_9.4.1-1_all.deb ... 145s Unpacking proj-data (9.4.1-1) ... 145s Selecting previously unselected package libjbig0:amd64. 145s Preparing to unpack .../033-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 145s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 145s Selecting previously unselected package libjpeg-turbo8:amd64. 145s Preparing to unpack .../034-libjpeg-turbo8_2.1.5-2ubuntu2_amd64.deb ... 145s Unpacking libjpeg-turbo8:amd64 (2.1.5-2ubuntu2) ... 145s Selecting previously unselected package libjpeg8:amd64. 145s Preparing to unpack .../035-libjpeg8_8c-2ubuntu11_amd64.deb ... 145s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 145s Selecting previously unselected package liblerc4:amd64. 145s Preparing to unpack .../036-liblerc4_4.0.0+ds-4ubuntu2_amd64.deb ... 145s Unpacking liblerc4:amd64 (4.0.0+ds-4ubuntu2) ... 145s Selecting previously unselected package libsharpyuv0:amd64. 145s Preparing to unpack .../037-libsharpyuv0_1.4.0-0.1_amd64.deb ... 145s Unpacking libsharpyuv0:amd64 (1.4.0-0.1) ... 145s Selecting previously unselected package libwebp7:amd64. 145s Preparing to unpack .../038-libwebp7_1.4.0-0.1_amd64.deb ... 145s Unpacking libwebp7:amd64 (1.4.0-0.1) ... 145s Selecting previously unselected package libtiff6:amd64. 145s Preparing to unpack .../039-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ... 145s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 145s Selecting previously unselected package libproj25:amd64. 145s Preparing to unpack .../040-libproj25_9.4.1-1_amd64.deb ... 145s Unpacking libproj25:amd64 (9.4.1-1) ... 145s Selecting previously unselected package libgeotiff5:amd64. 145s Preparing to unpack .../041-libgeotiff5_1.7.3-1_amd64.deb ... 145s Unpacking libgeotiff5:amd64 (1.7.3-1) ... 145s Selecting previously unselected package libgif7:amd64. 145s Preparing to unpack .../042-libgif7_5.2.2-1ubuntu1_amd64.deb ... 145s Unpacking libgif7:amd64 (5.2.2-1ubuntu1) ... 145s Selecting previously unselected package libsz2:amd64. 145s Preparing to unpack .../043-libsz2_1.1.3-1_amd64.deb ... 145s Unpacking libsz2:amd64 (1.1.3-1) ... 145s Selecting previously unselected package libhdf4-0-alt:amd64. 145s Preparing to unpack .../044-libhdf4-0-alt_4.3.0-1_amd64.deb 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146s Unpacking libpoppler140:amd64 (24.08.0-1) ... 146s Selecting previously unselected package libpq5:amd64. 146s Preparing to unpack .../065-libpq5_17.0-1_amd64.deb ... 146s Unpacking libpq5:amd64 (17.0-1) ... 146s Selecting previously unselected package libqhull-r8.0:amd64. 146s Preparing to unpack .../066-libqhull-r8.0_2020.2-6build1_amd64.deb ... 146s Unpacking libqhull-r8.0:amd64 (2020.2-6build1) ... 146s Selecting previously unselected package librttopo1:amd64. 146s Preparing to unpack .../067-librttopo1_1.1.0-3build2_amd64.deb ... 146s Unpacking librttopo1:amd64 (1.1.0-3build2) ... 146s Selecting previously unselected package libspatialite8t64:amd64. 146s Preparing to unpack .../068-libspatialite8t64_5.1.0-3build1_amd64.deb ... 146s Unpacking libspatialite8t64:amd64 (5.1.0-3build1) ... 146s Selecting previously unselected package libxerces-c3.2t64:amd64. 146s Preparing to unpack .../069-libxerces-c3.2t64_3.2.4+debian-1.3_amd64.deb ... 146s Unpacking libxerces-c3.2t64:amd64 (3.2.4+debian-1.3) ... 146s Selecting previously unselected package libgdal35:amd64. 146s Preparing to unpack .../070-libgdal35_3.9.1+dfsg-1build2_amd64.deb ... 146s Unpacking libgdal35:amd64 (3.9.1+dfsg-1build2) ... 146s Selecting previously unselected package libgomp1:amd64. 146s Preparing to unpack .../071-libgomp1_14.2.0-7ubuntu1_amd64.deb ... 146s Unpacking libgomp1:amd64 (14.2.0-7ubuntu1) ... 146s Selecting previously unselected package libgraphite2-3:amd64. 146s Preparing to unpack .../072-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 146s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 146s Selecting previously unselected package libharfbuzz0b:amd64. 146s Preparing to unpack .../073-libharfbuzz0b_9.0.0-1_amd64.deb ... 146s Unpacking libharfbuzz0b:amd64 (9.0.0-1) ... 146s Selecting previously unselected package x11-common. 146s Preparing to unpack .../074-x11-common_1%3a7.7+23ubuntu3_all.deb ... 146s Unpacking x11-common (1:7.7+23ubuntu3) ... 146s Selecting previously unselected package libice6:amd64. 146s Preparing to unpack .../075-libice6_2%3a1.1.1-1_amd64.deb ... 146s Unpacking libice6:amd64 (2:1.1.1-1) ... 146s Selecting previously unselected package libjs-bootstrap. 146s Preparing to unpack .../076-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 146s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 147s Selecting previously unselected package libthai-data. 147s Preparing to unpack .../077-libthai-data_0.1.29-2build1_all.deb ... 147s Unpacking libthai-data (0.1.29-2build1) ... 147s Selecting previously unselected package libthai0:amd64. 147s Preparing to unpack .../078-libthai0_0.1.29-2build1_amd64.deb ... 147s Unpacking libthai0:amd64 (0.1.29-2build1) ... 147s Selecting previously unselected package libpango-1.0-0:amd64. 147s Preparing to unpack .../079-libpango-1.0-0_1.54.0+ds-2_amd64.deb ... 147s Unpacking libpango-1.0-0:amd64 (1.54.0+ds-2) ... 147s Selecting previously unselected package libpangoft2-1.0-0:amd64. 147s Preparing to unpack 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Unpacking libtcl8.6:amd64 (8.6.14+dfsg-1build1) ... 147s Selecting previously unselected package libxft2:amd64. 147s Preparing to unpack .../086-libxft2_2.3.6-1build1_amd64.deb ... 147s Unpacking libxft2:amd64 (2.3.6-1build1) ... 147s Selecting previously unselected package libxss1:amd64. 147s Preparing to unpack .../087-libxss1_1%3a1.2.3-1build3_amd64.deb ... 147s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 147s Selecting previously unselected package libtk8.6:amd64. 147s Preparing to unpack .../088-libtk8.6_8.6.14-1build1_amd64.deb ... 147s Unpacking libtk8.6:amd64 (8.6.14-1build1) ... 147s Selecting previously unselected package libudunits2-data. 147s Preparing to unpack .../089-libudunits2-data_2.2.28-7build1_all.deb ... 147s Unpacking libudunits2-data (2.2.28-7build1) ... 147s Selecting previously unselected package libudunits2-0. 147s Preparing to unpack .../090-libudunits2-0_2.2.28-7build1_amd64.deb ... 147s Unpacking libudunits2-0 (2.2.28-7build1) ... 147s Selecting previously unselected package libxt6t64:amd64. 147s Preparing to unpack .../091-libxt6t64_1%3a1.2.1-1.2build1_amd64.deb ... 147s Unpacking libxt6t64:amd64 (1:1.2.1-1.2build1) ... 147s Selecting previously unselected package zip. 147s Preparing to unpack .../092-zip_3.0-14_amd64.deb ... 147s Unpacking zip (3.0-14) ... 147s Selecting previously unselected package unzip. 147s Preparing to unpack .../093-unzip_6.0-28ubuntu6_amd64.deb ... 147s Unpacking unzip (6.0-28ubuntu6) ... 147s Selecting previously unselected package xdg-utils. 147s Preparing to unpack .../094-xdg-utils_1.2.1-0ubuntu1_all.deb ... 147s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 147s Selecting previously unselected package r-base-core. 147s Preparing to unpack .../095-r-base-core_4.4.2-1_amd64.deb ... 147s Unpacking r-base-core (4.4.2-1) ... 147s Selecting previously unselected package r-cran-littler. 147s Preparing to unpack .../096-r-cran-littler_0.3.20-1_amd64.deb ... 147s Unpacking r-cran-littler (0.3.20-1) ... 147s Selecting previously unselected package littler. 147s Preparing to unpack .../097-littler_0.3.20-1_all.deb ... 147s Unpacking littler (0.3.20-1) ... 147s Selecting previously unselected package node-html5shiv. 147s Preparing to unpack .../098-node-html5shiv_3.7.3+dfsg-5_all.deb ... 147s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 147s Selecting previously unselected package r-cran-sys. 147s Preparing to unpack .../099-r-cran-sys_3.4.3-1_amd64.deb ... 147s Unpacking r-cran-sys (3.4.3-1) ... 147s Selecting previously unselected package r-cran-askpass. 148s Preparing to unpack .../100-r-cran-askpass_1.2.1-1_amd64.deb ... 148s Unpacking r-cran-askpass (1.2.1-1) ... 148s Selecting previously unselected package r-cran-brio. 148s Preparing to unpack .../101-r-cran-brio_1.1.5-1_amd64.deb ... 148s Unpacking r-cran-brio (1.1.5-1) ... 148s Selecting previously unselected package r-cran-ps. 148s Preparing to unpack .../102-r-cran-ps_1.8.0-1_amd64.deb ... 148s Unpacking r-cran-ps (1.8.0-1) ... 148s Selecting previously unselected package r-cran-r6. 148s Preparing to unpack .../103-r-cran-r6_2.5.1-1_all.deb ... 148s Unpacking r-cran-r6 (2.5.1-1) ... 148s Selecting previously unselected package r-cran-processx. 148s Preparing to unpack .../104-r-cran-processx_3.8.4-1_amd64.deb ... 148s Unpacking r-cran-processx (3.8.4-1) ... 148s Selecting previously unselected package r-cran-callr. 148s Preparing to unpack .../105-r-cran-callr_3.7.6-1_all.deb ... 148s Unpacking r-cran-callr (3.7.6-1) ... 148s Selecting previously unselected package r-cran-mass. 148s Preparing to unpack .../106-r-cran-mass_7.3-61-1_amd64.deb ... 148s Unpacking r-cran-mass (7.3-61-1) ... 148s Selecting previously unselected package r-cran-class. 148s Preparing to unpack .../107-r-cran-class_7.3-22-2build1_amd64.deb ... 148s Unpacking r-cran-class (7.3-22-2build1) ... 148s Selecting previously unselected package r-cran-proxy. 148s Preparing to unpack .../108-r-cran-proxy_0.4-27-1_amd64.deb ... 148s Unpacking r-cran-proxy (0.4-27-1) ... 148s Selecting previously unselected package r-cran-e1071. 148s Preparing to unpack .../109-r-cran-e1071_1.7-16-1_amd64.deb ... 148s Unpacking r-cran-e1071 (1.7-16-1) ... 148s Selecting previously unselected package r-cran-kernsmooth. 148s Preparing to unpack .../110-r-cran-kernsmooth_2.23-24-1_amd64.deb ... 148s Unpacking r-cran-kernsmooth (2.23-24-1) ... 148s Selecting previously unselected package r-cran-classint. 148s Preparing to unpack .../111-r-cran-classint_0.4-10+dfsg-1_amd64.deb ... 148s Unpacking r-cran-classint (0.4-10+dfsg-1) ... 148s Selecting previously unselected package r-cran-cli. 148s Preparing to unpack .../112-r-cran-cli_3.6.2-1_amd64.deb ... 148s Unpacking r-cran-cli (3.6.2-1) ... 148s Selecting previously unselected package r-cran-digest. 148s Preparing to unpack .../113-r-cran-digest_0.6.37-1_amd64.deb ... 148s Unpacking r-cran-digest (0.6.37-1) ... 148s Selecting previously unselected package r-cran-jsonlite. 148s Preparing to unpack .../114-r-cran-jsonlite_1.8.8+dfsg-1_amd64.deb ... 148s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 148s Selecting previously unselected package r-cran-lazyeval. 148s Preparing to unpack .../115-r-cran-lazyeval_0.2.2-1build1_amd64.deb ... 148s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 148s Selecting previously unselected package r-cran-rex. 148s Preparing to unpack .../116-r-cran-rex_1.2.1-1_all.deb ... 148s Unpacking r-cran-rex (1.2.1-1) ... 148s Selecting previously unselected package r-cran-curl. 148s Preparing to unpack .../117-r-cran-curl_5.2.1+dfsg-1_amd64.deb ... 148s Unpacking r-cran-curl (5.2.1+dfsg-1) ... 148s Selecting previously unselected package r-cran-mime. 148s Preparing to unpack .../118-r-cran-mime_0.12-2_amd64.deb ... 148s Unpacking r-cran-mime (0.12-2) ... 148s Selecting previously unselected package r-cran-openssl. 148s Preparing to unpack .../119-r-cran-openssl_2.2.0+dfsg-1_amd64.deb ... 148s Unpacking r-cran-openssl (2.2.0+dfsg-1) ... 148s Selecting previously unselected package r-cran-httr. 148s Preparing to unpack .../120-r-cran-httr_1.4.7+dfsg-1_all.deb ... 148s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 148s Selecting previously unselected package r-cran-crayon. 148s Preparing to unpack .../121-r-cran-crayon_1.5.2-1_all.deb ... 148s Unpacking r-cran-crayon (1.5.2-1) ... 148s Selecting previously unselected package r-cran-withr. 148s Preparing to unpack .../122-r-cran-withr_3.0.0+dfsg-1_all.deb ... 148s Unpacking r-cran-withr (3.0.0+dfsg-1) ... 148s Selecting previously unselected package r-cran-yaml. 148s Preparing to unpack .../123-r-cran-yaml_2.3.8-2_amd64.deb ... 148s Unpacking r-cran-yaml (2.3.8-2) ... 148s Selecting previously unselected package r-cran-covr. 148s Preparing to unpack .../124-r-cran-covr_3.6.4+dfsg-1_amd64.deb ... 148s Unpacking r-cran-covr (3.6.4+dfsg-1) ... 148s Selecting previously unselected package r-cran-dbi. 148s Preparing to unpack .../125-r-cran-dbi_1.2.3-1_all.deb ... 148s Unpacking r-cran-dbi 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160s Type 'license()' or 'licence()' for distribution details. 160s 160s R is a collaborative project with many contributors. 160s Type 'contributors()' for more information and 160s 'citation()' on how to cite R or R packages in publications. 160s 160s Type 'demo()' for some demos, 'help()' for on-line help, or 160s 'help.start()' for an HTML browser interface to help. 160s Type 'q()' to quit R. 160s 160s > suppressPackageStartupMessages(library(sf)) 160s > suppressPackageStartupMessages(library(lwgeom)) 160s > p = st_sfc(st_point(c(7,52)), st_point(c(8,53)), crs = 4326) 160s Warning messages: 160s 1: In fun(libname, pkgname) : 160s GEOS versions differ: lwgeom has 3.12.1 sf has 3.12.2 160s 2: In fun(libname, pkgname) : 160s PROJ versions differ: lwgeom has 9.4.0 sf has 9.5.0 160s > st_geod_azimuth(p) 160s 0.5410385 [rad] 160s > 160s BEGIN TEST dist.R 160s 160s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 160s Copyright (C) 2024 The R Foundation for Statistical Computing 160s Platform: x86_64-pc-linux-gnu 160s 160s R is free software and comes with ABSOLUTELY NO WARRANTY. 160s You are welcome to redistribute it under certain conditions. 160s Type 'license()' or 'licence()' for distribution details. 160s 160s R is a collaborative project with many contributors. 160s Type 'contributors()' for more information and 160s 'citation()' on how to cite R or R packages in publications. 160s 160s Type 'demo()' for some demos, 'help()' for on-line help, or 160s 'help.start()' for an HTML browser interface to help. 160s Type 'q()' to quit R. 160s 160s > suppressPackageStartupMessages(library(sf)) 161s > library(sp) 161s > suppressPackageStartupMessages(library(units)) 161s > library(geosphere) 161s > 161s > x = st_sfc( 161s + st_point(c(0,0)), 161s + st_point(c(1,0)), 161s + st_point(c(2,0)), 161s + st_point(c(3,0)), 161s + crs = 4326 161s + ) 161s > 161s > y = st_sfc( 161s + st_point(c(0,10)), 161s + st_point(c(1,0)), 161s + st_point(c(2,0)), 161s + st_point(c(3,0)), 161s + st_point(c(4,0)), 161s + crs = 4326 161s + ) 161s > 161s > st_crs(y) = 4326 161s > st_crs(x) = 4326 161s > sf_use_s2(FALSE) 161s > (d.sf = st_distance(x, y)) 161s Spherical geometry (s2) switched off 161s Units: [m] 161s [,1] [,2] [,3] [,4] [,5] 161s [1,] 1105855 111319.5 222639.0 333958.5 445278.0 161s [2,] 1111387 0.0 111319.5 222639.0 333958.5 161s [3,] 1127822 111319.5 0.0 111319.5 222639.0 161s [4,] 1154693 222639.0 111319.5 0.0 111319.5 161s > 161s BEGIN TEST geod.R 161s 161s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 161s Copyright (C) 2024 The R Foundation for Statistical Computing 161s Platform: x86_64-pc-linux-gnu 161s 161s R is free software and comes with ABSOLUTELY NO WARRANTY. 161s You are welcome to redistribute it under certain conditions. 161s Type 'license()' or 'licence()' for distribution details. 161s 161s R is a collaborative project with many contributors. 161s Type 'contributors()' for more information and 161s 'citation()' on how to cite R or R packages in publications. 161s 161s Type 'demo()' for some demos, 'help()' for on-line help, or 161s 'help.start()' for an HTML browser interface to help. 161s Type 'q()' to quit R. 161s 161s > ### Name: lw_geodetic 161s > ### Title: geodetic length, area, and predicates 161s > ### Aliases: lw_geodetic st_geod_area lw_geodetic st_geod_length 161s > ### lw_geodetic st_geod_segmentize lw_geodetic st_geod_covers 161s > 161s > ### ** Examples 161s > 161s > suppressPackageStartupMessages(library(sf)) 161s > suppressPackageStartupMessages(library(lwgeom)) 161s Warning messages: 161s 1: In fun(libname, pkgname) : 161s GEOS versions differ: lwgeom has 3.12.1 sf has 3.12.2 161s 2: In fun(libname, pkgname) : 161s PROJ versions differ: lwgeom has 9.4.0 sf has 9.5.0 161s > suppressPackageStartupMessages(library(units)) 161s > nc = st_read(system.file("gpkg/nc.gpkg", package="sf"), quiet = TRUE) 161s > st_geod_area(nc[1:3,]) 161s Units: [m^2] 161s [1] 1137388604 611077263 1423489919 161s > # st_area(nc[1:3,]) 161s > l = st_sfc(st_linestring(rbind(c(7,52), c(8,53))), crs = 4326) 161s > st_geod_length(l) 161s 130359.3 [m] 161s > pol = st_polygon(list(rbind(c(0,0), c(0,60), c(60,60), c(0,0)))) 161s > x = st_sfc(pol, crs = 4326) 161s > seg = st_geod_segmentize(x[1], set_units(10, km)) 161s > plot(seg, graticule = TRUE, axes = TRUE) 161s > pole = st_polygon(list(rbind(c(0,80), c(120,80), c(240,80), c(0,80)))) 161s > pt = st_point(c(0,90)) 161s > x = st_sfc(pole, pt, crs = 4326) 161s > st_geod_covers(x[c(1,1,1)], x[c(2,2,2,2)]) 161s Sparse geometry binary predicate list of length 3, where the predicate 161s was `covers' 161s 1: 1, 2, 3, 4 161s 2: 1, 2, 3, 4 161s 3: 1, 2, 3, 4 161s > st_geod_covered_by(x[c(2,2)], x[c(1,1,1)]) 161s Sparse geometry binary predicate list of length 2, where the predicate 161s was `covered_by' 161s 1: 1, 2, 3 161s 2: 1, 2, 3 161s > st_geod_covers(x[c(1,1,1)], x[c(2,2,2,2)], sparse = FALSE) 161s [,1] [,2] [,3] [,4] 161s [1,] TRUE TRUE TRUE TRUE 161s [2,] TRUE TRUE TRUE TRUE 161s [3,] TRUE TRUE TRUE TRUE 161s > st_geod_covered_by(x[c(2,2)], x[c(1,1,1)], sparse = FALSE) 161s [,1] [,2] [,3] 161s [1,] TRUE TRUE TRUE 161s [2,] TRUE TRUE TRUE 161s > 161s > # box crossing the dateline: 161s > #box = st_polygon(list(rbind(c(179.5,0), c(179.5,1), c(-179.5,1), c(-179.5,0), c(179.5,0)))) 161s > box = st_polygon(list(rbind(c(179.5,0.1), c(179.5,1), c(-179.5,1), c(-179.5,0.1), c(179.5,0.1)))) 161s > b = st_sfc(box, crs = 4326) 161s > units::set_units(st_geod_area(b), km^2) # approx 111^2 161s 11077.84 [km^2] 161s > 161s > pt = st_point(c(30, 70)) 161s > x = st_sfc(pole, pt, pt, crs = 4326) 161s > st_geod_distance(x, x) 161s Units: [m] 161s [,1] [,2] [,3] 161s [1,] 0 1378923 1378923 161s [2,] 1378923 0 0 161s [3,] 1378923 0 0 161s > st_geod_distance(x, x, sparse = TRUE) 161s Sparse geometry binary predicate list of length 3, where the predicate 161s was `st_is_within_distance' 161s 1: 1 161s 2: 2, 3 161s 3: 2, 3 161s > st_geod_distance(x, x, tolerance = 1, sparse = TRUE) 161s Sparse geometry binary predicate list of length 3, where the predicate 161s was `st_is_within_distance' 161s 1: 1 161s 2: 2, 3 161s 3: 2, 3 161s > 161s BEGIN TEST perimeter.R 162s 162s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 162s Copyright (C) 2024 The R Foundation for Statistical Computing 162s Platform: x86_64-pc-linux-gnu 162s 162s R is free software and comes with ABSOLUTELY NO WARRANTY. 162s You are welcome to redistribute it under certain conditions. 162s Type 'license()' or 'licence()' for distribution details. 162s 162s R is a collaborative project with many contributors. 162s Type 'contributors()' for more information and 162s 'citation()' on how to cite R or R packages in publications. 162s 162s Type 'demo()' for some demos, 'help()' for on-line help, or 162s 'help.start()' for an HTML browser interface to help. 162s Type 'q()' to quit R. 162s 162s > suppressPackageStartupMessages(library(lwgeom)) 162s > suppressPackageStartupMessages(library(sf)) 162s Warning messages: 162s 1: In fun(libname, pkgname) : 162s GEOS versions differ: lwgeom has 3.12.1 sf has 3.12.2 162s 2: In fun(libname, pkgname) : 162s PROJ versions differ: lwgeom has 9.4.0 sf has 9.5.0 162s > nc = st_read(system.file("gpkg/nc.gpkg", package="sf"), quiet = TRUE) 162s > nc = st_transform(nc, 3857) 162s > st_perimeter(nc)[1:5] 162s Error: 'st_perimeter_lwgeom' is not an exported object from 'namespace:lwgeom' 162s Execution halted 162s autopkgtest [16:07:37]: test run-unit-test: -----------------------] 163s run-unit-test FAIL non-zero exit status 1 163s autopkgtest [16:07:38]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 163s autopkgtest [16:07:38]: test pkg-r-autopkgtest: preparing testbed 165s Reading package lists... 165s Building dependency tree... 165s Reading state information... 165s Starting pkgProblemResolver with broken count: 0 165s Starting 2 pkgProblemResolver with broken count: 0 165s Done 166s The following additional packages will be installed: 166s build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu 166s dctrl-tools g++ g++-14 g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc 166s gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-14 166s gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools libasan8 166s libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev 166s libgfortran-14-dev libhwasan0 libicu-dev libisl23 libitm1 libjpeg-dev 166s libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 liblzma-dev libmpc3 166s libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 166s libpkgconf3 libpng-dev libquadmath0 libreadline-dev libstdc++-14-dev 166s libtirpc-dev libtsan2 libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin 166s r-base-dev zlib1g-dev 166s Suggested packages: 166s cpp-doc gcc-14-locales cpp-14-doc debtags g++-multilib g++-14-multilib 166s gcc-14-doc gcc-multilib manpages-dev autoconf automake libtool flex bison 166s gdb gcc-doc gcc-14-multilib gdb-x86-64-linux-gnu gfortran-multilib 166s gfortran-doc gfortran-14-multilib gfortran-14-doc libcoarrays-dev 166s liblapack-doc icu-doc liblzma-doc ncurses-doc readline-doc libstdc++-14-doc 166s texlive-base texlive-latex-base texlive-plain-generic 166s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils 166s texlive-latex-recommended texlive-latex-extra texinfo 166s Recommended packages: 166s bzip2-doc libpng-tools 166s The following NEW packages will be installed: 166s autopkgtest-satdep build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu 166s cpp-x86-64-linux-gnu dctrl-tools g++ g++-14 g++-14-x86-64-linux-gnu 166s g++-x86-64-linux-gnu gcc gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu 166s gfortran gfortran-14 gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu 166s icu-devtools libasan8 libblas-dev libbz2-dev libcc1-0 libdeflate-dev 166s libgcc-14-dev libgfortran-14-dev libhwasan0 libicu-dev libisl23 libitm1 166s libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 166s liblzma-dev libmpc3 libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev 166s libpcre2-posix3 libpkgconf3 libpng-dev libquadmath0 libreadline-dev 166s libstdc++-14-dev libtirpc-dev libtsan2 libubsan1 pkg-r-autopkgtest pkgconf 166s pkgconf-bin r-base-dev zlib1g-dev 166s 0 upgraded, 56 newly installed, 0 to remove and 0 not upgraded. 166s Need to get 100 MB/100 MB of archives. 166s After this operation, 355 MB of additional disk space will be used. 166s Get:1 /tmp/autopkgtest.pg3l8S/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [744 B] 166s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 166s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 166s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-7ubuntu1 [11.9 MB] 168s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-7ubuntu1 [1026 B] 168s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [5452 B] 168s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.1.0-2ubuntu1 [22.4 kB] 168s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 14.2.0-7ubuntu1 [47.6 kB] 168s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 14.2.0-7ubuntu1 [29.1 kB] 168s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 14.2.0-7ubuntu1 [2998 kB] 169s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 14.2.0-7ubuntu1 [1316 kB] 169s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 14.2.0-7ubuntu1 [2733 kB] 170s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 14.2.0-7ubuntu1 [1177 kB] 170s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 14.2.0-7ubuntu1 [1634 kB] 170s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 14.2.0-7ubuntu1 [153 kB] 170s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-7ubuntu1 [2814 kB] 171s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-7ubuntu1 [23.4 MB] 174s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-7ubuntu1 [526 kB] 174s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1214 B] 174s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.1.0-2ubuntu1 [5000 B] 174s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-7ubuntu1 [2503 kB] 174s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-7ubuntu1 [13.4 MB] 176s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-7ubuntu1 [19.8 kB] 176s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [966 B] 176s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.1.0-2ubuntu1 [1100 B] 176s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 176s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 dctrl-tools amd64 2.24-3build3 [106 kB] 176s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran-14-dev amd64 14.2.0-7ubuntu1 [965 kB] 176s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-7ubuntu1 [12.6 MB] 177s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14 amd64 14.2.0-7ubuntu1 [11.6 kB] 177s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1022 B] 178s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran amd64 4:14.1.0-2ubuntu1 [1172 B] 178s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 icu-devtools amd64 74.2-1ubuntu4 [213 kB] 178s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas-dev amd64 3.12.0-3build2 [172 kB] 178s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libbz2-dev amd64 1.0.8-6 [33.8 kB] 178s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate-dev amd64 1.22-1 [72.2 kB] 178s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libicu-dev amd64 74.2-1ubuntu4 [11.9 MB] 179s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8-dev amd64 2.1.5-2ubuntu2 [295 kB] 180s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 180s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 180s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack-dev amd64 3.12.0-3build2 [5249 kB] 180s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses-dev amd64 6.5-2 [384 kB] 180s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.42-4ubuntu3 [214 kB] 180s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-32-0 amd64 10.42-4ubuntu3 [201 kB] 181s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-posix3 amd64 10.42-4ubuntu3 [6768 B] 181s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-dev amd64 10.42-4ubuntu3 [747 kB] 181s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libpkgconf3 amd64 1.8.1-4 [32.3 kB] 181s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 181s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libpng-dev amd64 1.6.44-1 [266 kB] 181s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libreadline-dev amd64 8.2-5 [169 kB] 181s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma-dev amd64 5.6.2-2 [176 kB] 181s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf-bin amd64 1.8.1-4 [21.6 kB] 181s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf amd64 1.8.1-4 [16.8 kB] 182s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3 [193 kB] 182s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-dev all 4.4.2-1 [4340 B] 182s Get:56 http://ftpmaster.internal/ubuntu plucky/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 182s Fetched 100 MB in 16s (6261 kB/s) 182s Selecting previously unselected package libisl23:amd64. 182s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84697 files and directories currently installed.) 182s Preparing to unpack .../00-libisl23_0.27-1_amd64.deb ... 182s Unpacking libisl23:amd64 (0.27-1) ... 182s Selecting previously unselected package libmpc3:amd64. 182s Preparing to unpack .../01-libmpc3_1.3.1-1build2_amd64.deb ... 182s Unpacking libmpc3:amd64 (1.3.1-1build2) ... 182s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 182s Preparing to unpack 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unselected package gcc. 183s Preparing to unpack .../18-gcc_4%3a14.1.0-2ubuntu1_amd64.deb ... 183s Unpacking gcc (4:14.1.0-2ubuntu1) ... 183s Selecting previously unselected package libstdc++-14-dev:amd64. 183s Preparing to unpack .../19-libstdc++-14-dev_14.2.0-7ubuntu1_amd64.deb ... 183s Unpacking libstdc++-14-dev:amd64 (14.2.0-7ubuntu1) ... 183s Selecting previously unselected package g++-14-x86-64-linux-gnu. 183s Preparing to unpack .../20-g++-14-x86-64-linux-gnu_14.2.0-7ubuntu1_amd64.deb ... 183s Unpacking g++-14-x86-64-linux-gnu (14.2.0-7ubuntu1) ... 183s Selecting previously unselected package g++-14. 183s Preparing to unpack .../21-g++-14_14.2.0-7ubuntu1_amd64.deb ... 183s Unpacking g++-14 (14.2.0-7ubuntu1) ... 184s Selecting previously unselected package g++-x86-64-linux-gnu. 184s Preparing to unpack .../22-g++-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 184s Unpacking g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 184s Selecting previously unselected package g++. 184s 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185s Setting up libhwasan0:amd64 (14.2.0-7ubuntu1) ... 185s Setting up libasan8:amd64 (14.2.0-7ubuntu1) ... 185s Setting up libtsan2:amd64 (14.2.0-7ubuntu1) ... 185s Setting up libjpeg8-dev:amd64 (8c-2ubuntu11) ... 185s Setting up libisl23:amd64 (0.27-1) ... 185s Setting up libdeflate-dev:amd64 (1.22-1) ... 185s Setting up libicu-dev:amd64 (74.2-1ubuntu4) ... 185s Setting up libcc1-0:amd64 (14.2.0-7ubuntu1) ... 185s Setting up liblsan0:amd64 (14.2.0-7ubuntu1) ... 185s Setting up libblas-dev:amd64 (3.12.0-3build2) ... 185s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode 185s Setting up dctrl-tools (2.24-3build3) ... 185s Setting up libitm1:amd64 (14.2.0-7ubuntu1) ... 185s Setting up libbz2-dev:amd64 (1.0.8-6) ... 185s Setting up libpcre2-dev:amd64 (10.42-4ubuntu3) ... 185s Setting up libpng-dev:amd64 (1.6.44-1) ... 185s Setting up libjpeg-dev:amd64 (8c-2ubuntu11) ... 185s Setting up pkgconf:amd64 (1.8.1-4) ... 185s Setting up liblapack-dev:amd64 (3.12.0-3build2) ... 185s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode 185s Setting up cpp-14-x86-64-linux-gnu (14.2.0-7ubuntu1) ... 185s Setting up cpp-14 (14.2.0-7ubuntu1) ... 185s Setting up libgcc-14-dev:amd64 (14.2.0-7ubuntu1) ... 185s Setting up libstdc++-14-dev:amd64 (14.2.0-7ubuntu1) ... 185s Setting up cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 185s Setting up libgfortran-14-dev:amd64 (14.2.0-7ubuntu1) ... 185s Setting up cpp (4:14.1.0-2ubuntu1) ... 185s Setting up gcc-14-x86-64-linux-gnu (14.2.0-7ubuntu1) ... 185s Setting up gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 185s Setting up gcc-14 (14.2.0-7ubuntu1) ... 185s Setting up gfortran-14-x86-64-linux-gnu (14.2.0-7ubuntu1) ... 185s Setting up g++-14-x86-64-linux-gnu (14.2.0-7ubuntu1) ... 185s Setting up g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 185s Setting up g++-14 (14.2.0-7ubuntu1) ... 185s Setting up gfortran-14 (14.2.0-7ubuntu1) ... 185s Setting up gfortran-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 185s Setting up gcc (4:14.1.0-2ubuntu1) ... 185s Setting up g++ (4:14.1.0-2ubuntu1) ... 185s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 185s Setting up build-essential (12.10ubuntu1) ... 185s Setting up gfortran (4:14.1.0-2ubuntu1) ... 185s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 185s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 185s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 185s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 185s Setting up r-base-dev (4.4.2-1) ... 185s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 185s Setting up autopkgtest-satdep (0) ... 185s Processing triggers for man-db (2.12.1-3) ... 186s Processing triggers for install-info (7.1.1-1) ... 186s Processing triggers for libc-bin (2.40-1ubuntu3) ... 188s (Reading database ... 86789 files and directories currently installed.) 188s Removing autopkgtest-satdep (0) ... 189s autopkgtest [16:08:04]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 189s autopkgtest [16:08:04]: test pkg-r-autopkgtest: [----------------------- 189s Test: Try to load the R library lwgeom 189s 189s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 189s Copyright (C) 2024 The R Foundation for Statistical Computing 189s Platform: x86_64-pc-linux-gnu 189s 189s R is free software and comes with ABSOLUTELY NO WARRANTY. 189s You are welcome to redistribute it under certain conditions. 189s Type 'license()' or 'licence()' for distribution details. 189s 189s R is a collaborative project with many contributors. 189s Type 'contributors()' for more information and 189s 'citation()' on how to cite R or R packages in publications. 189s 189s Type 'demo()' for some demos, 'help()' for on-line help, or 189s 'help.start()' for an HTML browser interface to help. 189s Type 'q()' to quit R. 189s 189s > library('lwgeom') 189s Linking to liblwgeom 3.0.0beta1 r16016, GEOS 3.12.1, PROJ 9.4.0 189s > 189s > 189s Warning messages: 189s 1: In fun(libname, pkgname) : 189s GEOS versions differ: lwgeom has 3.12.1 sf has 3.12.2 189s 2: In fun(libname, pkgname) : 189s PROJ versions differ: lwgeom has 9.4.0 sf has 9.5.0 189s Other tests are currently unsupported! 189s They will be progressively added. 190s autopkgtest [16:08:05]: test pkg-r-autopkgtest: -----------------------] 190s pkg-r-autopkgtest PASS 190s autopkgtest [16:08:05]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 190s autopkgtest [16:08:05]: @@@@@@@@@@@@@@@@@@@@ summary 190s run-unit-test FAIL non-zero exit status 1 190s pkg-r-autopkgtest PASS 202s nova [W] Skipping flock for amd64 202s Creating nova instance adt-plucky-amd64-r-cran-lwgeom-20241109-160455-juju-7f2275-prod-proposed-migration-environment-15-44f6f70f-b677-45e9-8781-4e5c3ddc0cf2 from image adt/ubuntu-plucky-amd64-server-20241108.img (UUID 8e5f101b-f604-4dd5-a1be-68c34044e0a9)...