0s autopkgtest [22:14:27]: starting date and time: 2025-03-15 22:14:27+0000 0s autopkgtest [22:14:27]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [22:14:27]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.8e4r3n5h/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-cran-libcoin --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-13.secgroup --name adt-plucky-amd64-r-cran-libcoin-20250315-221427-juju-7f2275-prod-proposed-migration-environment-15-f7cc597d-986c-40e3-901a-28fbaea26402 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 47s autopkgtest [22:15:14]: testbed dpkg architecture: amd64 47s autopkgtest [22:15:14]: testbed apt version: 2.9.31ubuntu1 48s autopkgtest [22:15:15]: @@@@@@@@@@@@@@@@@@@@ test bed setup 48s autopkgtest [22:15:15]: testbed release detected to be: None 49s autopkgtest [22:15:16]: updating testbed package index (apt update) 49s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 49s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 50s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 50s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 50s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [369 kB] 50s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [14.5 kB] 50s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [44.1 kB] 50s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [67.4 kB] 50s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [85.7 kB] 50s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 c-n-f Metadata [1852 B] 50s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 c-n-f Metadata [116 B] 50s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [174 kB] 50s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [342 kB] 50s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 c-n-f Metadata [15.3 kB] 50s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [16.1 kB] 50s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [8544 B] 50s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 c-n-f Metadata [628 B] 50s Fetched 1265 kB in 1s (1366 kB/s) 51s Reading package lists... 52s + lsb_release --codename --short 52s + RELEASE=plucky 52s + cat 52s + [ plucky != trusty ] 52s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 52s Reading package lists... 52s Building dependency tree... 52s Reading state information... 53s Calculating upgrade... 53s Calculating upgrade... 53s The following package was automatically installed and is no longer required: 53s libnl-genl-3-200 53s Use 'sudo apt autoremove' to remove it. 53s The following NEW packages will be installed: 53s bpftool libdebuginfod-common libdebuginfod1t64 linux-headers-6.14.0-10 53s linux-headers-6.14.0-10-generic linux-image-6.14.0-10-generic 53s linux-modules-6.14.0-10-generic linux-modules-extra-6.14.0-10-generic 53s linux-perf linux-tools-6.14.0-10 linux-tools-6.14.0-10-generic pnp.ids 53s The following packages will be upgraded: 53s apparmor apt apt-utils binutils binutils-common binutils-x86-64-linux-gnu 53s cloud-init cloud-init-base curl dosfstools exfatprogs fwupd gcc-15-base 53s gir1.2-girepository-2.0 gir1.2-glib-2.0 htop hwdata initramfs-tools 53s initramfs-tools-bin initramfs-tools-core libapparmor1 libapt-pkg7.0 53s libassuan9 libatomic1 libaudit-common libaudit1 libbinutils libbrotli1 53s libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libctf-nobfd0 libctf0 53s libcurl3t64-gnutls libcurl4t64 libestr0 libftdi1-2 libfwupd3 libgcc-s1 53s libgirepository-1.0-1 libglib2.0-0t64 libglib2.0-data libgpgme11t64 53s libgprofng0 libjemalloc2 liblz4-1 liblzma5 libmm-glib0 libncurses6 53s libncursesw6 libnewt0.52 libnl-3-200 libnl-genl-3-200 libnl-route-3-200 53s libnss-systemd libpam-systemd libparted2t64 libpci3 libpython3-stdlib 53s libpython3.13 libpython3.13-minimal libpython3.13-stdlib libseccomp2 53s libselinux1 libsemanage-common libsemanage2 libsframe1 libsqlite3-0 53s libstdc++6 libsystemd-shared libsystemd0 libtinfo6 libudev1 libxml2 53s linux-firmware linux-generic linux-headers-generic linux-headers-virtual 53s linux-image-generic linux-image-virtual linux-libc-dev linux-tools-common 53s linux-virtual locales media-types ncurses-base ncurses-bin ncurses-term 53s parted pci.ids pciutils pinentry-curses python-apt-common python3 53s python3-apt python3-bcrypt python3-cffi-backend python3-dbus python3-gi 53s python3-jinja2 python3-lazr.uri python3-markupsafe python3-minimal 53s python3-newt python3-rpds-py python3-systemd python3-yaml python3.13 53s python3.13-gdbm python3.13-minimal rsync rsyslog strace systemd 53s systemd-cryptsetup systemd-resolved systemd-sysv systemd-timesyncd 53s ubuntu-kernel-accessories ubuntu-minimal ubuntu-standard udev whiptail 53s xz-utils 53s 126 upgraded, 12 newly installed, 0 to remove and 0 not upgraded. 53s Need to get 829 MB of archives. 53s After this operation, 325 MB of additional disk space will be used. 53s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-bin amd64 6.5+20250216-2 [194 kB] 54s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-dev-bin amd64 2.41-1ubuntu1 [24.7 kB] 54s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6-dev amd64 2.41-1ubuntu1 [2182 kB] 54s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 locales all 2.41-1ubuntu1 [4246 kB] 54s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6 amd64 2.41-1ubuntu1 [3327 kB] 54s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-bin amd64 2.41-1ubuntu1 [701 kB] 54s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-libc-dev amd64 6.14.0-10.10 [1723 kB] 54s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libatomic1 amd64 15-20250222-0ubuntu1 [10.4 kB] 54s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-15-base amd64 15-20250222-0ubuntu1 [53.4 kB] 54s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-s1 amd64 15-20250222-0ubuntu1 [77.8 kB] 54s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++6 amd64 15-20250222-0ubuntu1 [798 kB] 54s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-base all 6.5+20250216-2 [25.9 kB] 54s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-term all 6.5+20250216-2 [276 kB] 54s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 liblz4-1 amd64 1.10.0-4 [66.4 kB] 54s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma5 amd64 5.6.4-1 [157 kB] 54s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd0 amd64 257.3-1ubuntu3 [595 kB] 55s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libnss-systemd amd64 257.3-1ubuntu3 [199 kB] 55s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-sysv amd64 257.3-1ubuntu3 [11.9 kB] 55s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-resolved amd64 257.3-1ubuntu3 [345 kB] 55s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-systemd amd64 257.3-1ubuntu3 [302 kB] 55s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd-shared amd64 257.3-1ubuntu3 [2371 kB] 55s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd amd64 257.3-1ubuntu3 [3052 kB] 55s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-timesyncd amd64 257.3-1ubuntu3 [42.1 kB] 55s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-cryptsetup amd64 257.3-1ubuntu3 [124 kB] 55s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 udev amd64 257.3-1ubuntu3 [1404 kB] 55s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libudev1 amd64 257.3-1ubuntu3 [215 kB] 55s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit-common all 1:4.0.2-2ubuntu2 [6628 B] 55s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libcap-ng0 amd64 0.8.5-4build1 [15.6 kB] 55s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit1 amd64 1:4.0.2-2ubuntu2 [54.0 kB] 55s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libseccomp2 amd64 2.5.5-1ubuntu6 [53.5 kB] 55s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libselinux1 amd64 3.7-3ubuntu3 [87.3 kB] 55s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libapparmor1 amd64 4.1.0~beta5-0ubuntu8 [55.0 kB] 55s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libapt-pkg7.0 amd64 2.9.33 [1138 kB] 55s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 apt amd64 2.9.33 [1439 kB] 55s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 apt-utils amd64 2.9.33 [222 kB] 55s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-minimal amd64 3.13.2-2 [27.7 kB] 55s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 python3 amd64 3.13.2-2 [24.0 kB] 55s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13 amd64 3.13.2-2 [2341 kB] 55s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 media-types all 13.0.0 [29.9 kB] 55s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses6 amd64 6.5+20250216-2 [126 kB] 55s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libncursesw6 amd64 6.5+20250216-2 [165 kB] 55s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libtinfo6 amd64 6.5+20250216-2 [119 kB] 55s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libsqlite3-0 amd64 3.46.1-2 [715 kB] 55s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.2-2 [735 kB] 55s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.2-2 [2365 kB] 55s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.2-2 [883 kB] 55s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.2-2 [2066 kB] 55s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.4 kB] 55s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 rsync amd64 3.4.1+ds1-3 [482 kB] 56s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod-common all 0.192-4 [15.4 kB] 56s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage-common all 3.7-2.1build1 [7268 B] 56s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage2 amd64 3.7-2.1build1 [106 kB] 56s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libassuan9 amd64 3.0.2-2 [43.1 kB] 56s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-girepository-2.0 amd64 1.83.4-1 [25.3 kB] 56s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-glib-2.0 amd64 2.84.0-1 [184 kB] 56s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-0t64 amd64 2.84.0-1 [1669 kB] 56s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libgirepository-1.0-1 amd64 1.83.4-1 [89.5 kB] 56s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libestr0 amd64 0.1.11-2 [8340 B] 56s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-data all 2.84.0-1 [53.0 kB] 56s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-newt amd64 0.52.24-4ubuntu2 [21.1 kB] 56s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libnewt0.52 amd64 0.52.24-4ubuntu2 [55.7 kB] 56s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2ubuntu5 [772 kB] 56s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 python-apt-common all 2.9.9build1 [21.3 kB] 56s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-apt amd64 2.9.9build1 [172 kB] 56s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-cffi-backend amd64 1.17.1-2build2 [96.6 kB] 56s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dbus amd64 1.3.2-5build5 [102 kB] 56s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-4build1 [252 kB] 56s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-yaml amd64 6.0.2-1build2 [144 kB] 56s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 rsyslog amd64 8.2412.0-2ubuntu2 [555 kB] 56s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 whiptail amd64 0.52.24-4ubuntu2 [19.1 kB] 56s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-minimal amd64 1.549 [11.5 kB] 56s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 apparmor amd64 4.1.0~beta5-0ubuntu8 [701 kB] 56s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 dosfstools amd64 4.2-1.2 [95.0 kB] 56s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-genl-3-200 amd64 3.7.0-1 [12.2 kB] 56s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-route-3-200 amd64 3.7.0-1 [191 kB] 56s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-3-200 amd64 3.7.0-1 [64.9 kB] 56s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 parted amd64 3.6-5 [53.9 kB] 56s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libparted2t64 amd64 3.6-5 [158 kB] 56s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 pci.ids all 0.0~2025.03.09-1 [285 kB] 56s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 pciutils amd64 1:3.13.0-2 [110 kB] 56s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 libpci3 amd64 1:3.13.0-2 [39.8 kB] 56s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 strace amd64 6.13+ds-1ubuntu1 [622 kB] 56s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 xz-utils amd64 5.6.4-1 [278 kB] 56s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-standard amd64 1.549 [11.5 kB] 56s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libgprofng0 amd64 2.44-3ubuntu1 [886 kB] 56s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf0 amd64 2.44-3ubuntu1 [96.5 kB] 56s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf-nobfd0 amd64 2.44-3ubuntu1 [98.9 kB] 56s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-x86-64-linux-gnu amd64 2.44-3ubuntu1 [1108 kB] 56s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libbinutils amd64 2.44-3ubuntu1 [585 kB] 56s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils amd64 2.44-3ubuntu1 [208 kB] 56s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-common amd64 2.44-3ubuntu1 [215 kB] 56s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libsframe1 amd64 2.44-3ubuntu1 [14.8 kB] 56s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 hwdata all 0.393-3 [1562 B] 56s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 pnp.ids all 0.393-3 [29.5 kB] 56s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-common all 6.14.0-10.10 [295 kB] 56s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 bpftool amd64 7.6.0+6.14.0-10.10 [1147 kB] 56s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-markupsafe amd64 2.1.5-1build4 [13.4 kB] 56s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 56s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init-base all 25.1-0ubuntu3 [616 kB] 56s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libbrotli1 amd64 1.1.0-2build4 [365 kB] 56s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 curl amd64 8.12.1-3ubuntu1 [258 kB] 56s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4t64 amd64 8.12.1-3ubuntu1 [437 kB] 57s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 exfatprogs amd64 1.2.8-1 [76.3 kB] 57s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl3t64-gnutls amd64 8.12.1-3ubuntu1 [432 kB] 57s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 fwupd amd64 2.0.6-4 [5408 kB] 57s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libfwupd3 amd64 2.0.6-4 [136 kB] 57s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libmm-glib0 amd64 1.23.4-0ubuntu3 [251 kB] 57s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 htop amd64 3.4.0-2 [195 kB] 57s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-firmware amd64 20250310.git9e1370d3-0ubuntu1 [571 MB] 73s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools all 0.146ubuntu1 [7920 B] 73s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-core all 0.146ubuntu1 [51.9 kB] 73s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-bin amd64 0.146ubuntu1 [26.2 kB] 73s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod1t64 amd64 0.192-4 [21.0 kB] 73s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 libftdi1-2 amd64 1.5-8build1 [30.2 kB] 73s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libgpgme11t64 amd64 1.24.2-1ubuntu2 [155 kB] 73s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libjemalloc2 amd64 5.3.0-3 [277 kB] 73s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-6.14.0-10-generic amd64 6.14.0-10.10 [41.2 MB] 74s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-6.14.0-10-generic amd64 6.14.0-10.10 [15.3 MB] 75s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-extra-6.14.0-10-generic amd64 6.14.0-10.10 [120 MB] 78s Get:120 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-generic amd64 6.14.0-10.10 [1730 B] 78s Get:121 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-generic amd64 6.14.0-10.10 [11.1 kB] 78s Get:122 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-virtual amd64 6.14.0-10.10 [1722 B] 78s Get:123 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-virtual amd64 6.14.0-10.10 [11.1 kB] 78s Get:124 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-virtual amd64 6.14.0-10.10 [1642 B] 78s Get:125 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10 all 6.14.0-10.10 [14.2 MB] 79s Get:126 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10-generic amd64 6.14.0-10.10 [3915 kB] 79s Get:127 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-generic amd64 6.14.0-10.10 [11.0 kB] 79s Get:128 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-perf amd64 6.14.0-10.10 [4122 kB] 79s Get:129 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10 amd64 6.14.0-10.10 [1394 kB] 79s Get:130 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10-generic amd64 6.14.0-10.10 [830 B] 79s Get:131 http://ftpmaster.internal/ubuntu plucky/main amd64 pinentry-curses amd64 1.3.1-2ubuntu3 [42.3 kB] 79s Get:132 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lazr.uri all 1.0.6-6 [13.7 kB] 79s Get:133 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-rpds-py amd64 0.21.0-2ubuntu2 [278 kB] 79s Get:134 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-systemd amd64 235-1build6 [43.9 kB] 79s Get:135 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-gdbm amd64 3.13.2-2 [31.9 kB] 79s Get:136 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-kernel-accessories amd64 1.549 [11.2 kB] 79s Get:137 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init all 25.1-0ubuntu3 [2100 B] 79s Get:138 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-bcrypt amd64 4.2.0-2.1build1 [221 kB] 80s Preconfiguring packages ... 80s Fetched 829 MB in 26s (32.1 MB/s) 80s (Reading database ... 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unpack .../29-xz-utils_5.6.4-1_amd64.deb ... 92s Unpacking xz-utils (5.6.4-1) over (5.6.3-1) ... 92s Preparing to unpack .../30-ubuntu-standard_1.549_amd64.deb ... 92s Unpacking ubuntu-standard (1.549) over (1.548) ... 92s Preparing to unpack .../31-libgprofng0_2.44-3ubuntu1_amd64.deb ... 92s Unpacking libgprofng0:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 92s Preparing to unpack .../32-libctf0_2.44-3ubuntu1_amd64.deb ... 92s Unpacking libctf0:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 92s Preparing to unpack .../33-libctf-nobfd0_2.44-3ubuntu1_amd64.deb ... 92s Unpacking libctf-nobfd0:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 92s Preparing to unpack .../34-binutils-x86-64-linux-gnu_2.44-3ubuntu1_amd64.deb ... 92s Unpacking binutils-x86-64-linux-gnu (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 92s Preparing to unpack .../35-libbinutils_2.44-3ubuntu1_amd64.deb ... 92s Unpacking libbinutils:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 92s Preparing to unpack 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Preparing to unpack .../80-python3-systemd_235-1build6_amd64.deb ... 103s Unpacking python3-systemd (235-1build6) over (235-1build5) ... 103s Preparing to unpack .../81-python3.13-gdbm_3.13.2-2_amd64.deb ... 103s Unpacking python3.13-gdbm (3.13.2-2) over (3.13.2-1) ... 103s Preparing to unpack .../82-ubuntu-kernel-accessories_1.549_amd64.deb ... 103s Unpacking ubuntu-kernel-accessories (1.549) over (1.548) ... 103s Preparing to unpack .../83-cloud-init_25.1-0ubuntu3_all.deb ... 103s Unpacking cloud-init (25.1-0ubuntu3) over (25.1-0ubuntu2) ... 103s Preparing to unpack .../84-python3-bcrypt_4.2.0-2.1build1_amd64.deb ... 103s Unpacking python3-bcrypt (4.2.0-2.1build1) over (4.2.0-2.1) ... 103s Setting up linux-headers-6.14.0-10 (6.14.0-10.10) ... 103s Setting up media-types (13.0.0) ... 103s Installing new version of config file /etc/mime.types ... 103s Setting up linux-headers-6.14.0-10-generic (6.14.0-10.10) ... 103s Setting up ubuntu-kernel-accessories (1.549) ... 103s Setting up libapparmor1:amd64 (4.1.0~beta5-0ubuntu8) ... 103s Setting up pci.ids (0.0~2025.03.09-1) ... 103s Setting up libnewt0.52:amd64 (0.52.24-4ubuntu2) ... 103s Setting up apt-utils (2.9.33) ... 103s Setting up libdebuginfod-common (0.192-4) ... 104s Setting up exfatprogs (1.2.8-1) ... 104s Setting up linux-firmware (20250310.git9e1370d3-0ubuntu1) ... 104s Setting up bpftool (7.6.0+6.14.0-10.10) ... 104s Setting up libestr0:amd64 (0.1.11-2) ... 104s Setting up libbrotli1:amd64 (1.1.0-2build4) ... 104s Setting up libsqlite3-0:amd64 (3.46.1-2) ... 104s Setting up dosfstools (4.2-1.2) ... 104s Setting up rsyslog (8.2412.0-2ubuntu2) ... 104s info: The user `syslog' is already a member of `adm'. 105s Setting up binutils-common:amd64 (2.44-3ubuntu1) ... 105s Setting up libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) ... 105s Setting up linux-libc-dev:amd64 (6.14.0-10.10) ... 105s Setting up libctf-nobfd0:amd64 (2.44-3ubuntu1) ... 105s Setting up systemd (257.3-1ubuntu3) ... 105s /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring. 105s Created symlink '/run/systemd/system/tmp.mount' → '/dev/null'. 105s /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring. 106s Setting up libparted2t64:amd64 (3.6-5) ... 106s Removing 'diversion of /lib/x86_64-linux-gnu/libparted.so.2 to /lib/x86_64-linux-gnu/libparted.so.2.usr-is-merged by libparted2t64' 106s Removing 'diversion of /lib/x86_64-linux-gnu/libparted.so.2.0.5 to /lib/x86_64-linux-gnu/libparted.so.2.0.5.usr-is-merged by libparted2t64' 106s Setting up linux-headers-generic (6.14.0-10.10) ... 106s Setting up libjemalloc2:amd64 (5.3.0-3) ... 106s Setting up locales (2.41-1ubuntu1) ... 106s Installing new version of config file /etc/locale.alias ... 106s Generating locales (this might take a while)... 108s en_US.UTF-8... done 108s Generation complete. 108s Setting up libsframe1:amd64 (2.44-3ubuntu1) ... 108s Setting up libpython3.13-minimal:amd64 (3.13.2-2) ... 108s Setting up apparmor (4.1.0~beta5-0ubuntu8) ... 108s Installing new version of config file /etc/apparmor.d/fusermount3 ... 108s Installing new version of config file /etc/apparmor.d/lsusb ... 108s Installing new version of config file /etc/apparmor.d/openvpn ... 109s Reloading AppArmor profiles 110s Setting up libftdi1-2:amd64 (1.5-8build1) ... 110s Setting up libglib2.0-data (2.84.0-1) ... 110s Setting up systemd-cryptsetup (257.3-1ubuntu3) ... 110s Setting up libncurses6:amd64 (6.5+20250216-2) ... 110s Setting up strace (6.13+ds-1ubuntu1) ... 110s Setting up xz-utils (5.6.4-1) ... 110s Setting up systemd-timesyncd (257.3-1ubuntu3) ... 111s systemd-time-wait-sync.service is a disabled or a static unit not running, not starting it. 111s Setting up libatomic1:amd64 (15-20250222-0ubuntu1) ... 111s Setting up udev (257.3-1ubuntu3) ... 112s Setting up linux-modules-6.14.0-10-generic (6.14.0-10.10) ... 114s Setting up libncursesw6:amd64 (6.5+20250216-2) ... 114s Setting up libpci3:amd64 (1:3.13.0-2) ... 114s Setting up whiptail (0.52.24-4ubuntu2) ... 114s Setting up python-apt-common (2.9.9build1) ... 114s Setting up pnp.ids (0.393-3) ... 114s Setting up libnl-3-200:amd64 (3.7.0-1) ... 114s Setting up python3.13-minimal (3.13.2-2) ... 115s Setting up libgpgme11t64:amd64 (1.24.2-1ubuntu2) ... 115s Setting up libbinutils:amd64 (2.44-3ubuntu1) ... 115s Setting up libc-dev-bin (2.41-1ubuntu1) ... 115s Setting up libpython3.13-stdlib:amd64 (3.13.2-2) ... 115s Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2ubuntu5) ... 115s Setting up rsync (3.4.1+ds1-3) ... 116s rsync.service is a disabled or a static unit not running, not starting it. 116s Setting up python3.13-gdbm (3.13.2-2) ... 116s Setting up libpython3-stdlib:amd64 (3.13.2-2) ... 116s Setting up systemd-resolved (257.3-1ubuntu3) ... 116s Setting up initramfs-tools-bin (0.146ubuntu1) ... 116s Setting up ncurses-term (6.5+20250216-2) ... 116s Setting up libctf0:amd64 (2.44-3ubuntu1) ... 116s Setting up libpython3.13:amd64 (3.13.2-2) ... 116s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 116s Setting up libdebuginfod1t64:amd64 (0.192-4) ... 116s Setting up systemd-sysv (257.3-1ubuntu3) ... 116s Setting up linux-headers-virtual (6.14.0-10.10) ... 116s Setting up libcurl4t64:amd64 (8.12.1-3ubuntu1) ... 116s Setting up python3.13 (3.13.2-2) ... 117s Setting up htop (3.4.0-2) ... 117s Setting up linux-image-6.14.0-10-generic (6.14.0-10.10) ... 120s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.12.0-16-generic 120s I: /boot/initrd.img.old is now a symlink to initrd.img-6.12.0-16-generic 120s I: /boot/vmlinuz is now a symlink to vmlinuz-6.14.0-10-generic 120s I: /boot/initrd.img is now a symlink to initrd.img-6.14.0-10-generic 120s Setting up parted (3.6-5) ... 120s Setting up libnss-systemd:amd64 (257.3-1ubuntu3) ... 120s Setting up python3 (3.13.2-2) ... 120s Setting up python3-newt:amd64 (0.52.24-4ubuntu2) ... 120s Setting up python3-markupsafe (2.1.5-1build4) ... 120s Setting up linux-modules-extra-6.14.0-10-generic (6.14.0-10.10) ... 122s Setting up libnl-route-3-200:amd64 (3.7.0-1) ... 122s Setting up hwdata (0.393-3) ... 122s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 122s Setting up libglib2.0-0t64:amd64 (2.84.0-1) ... 122s No schema files found: doing nothing. 122s Setting up libgprofng0:amd64 (2.44-3ubuntu1) ... 122s Setting up linux-perf (6.14.0-10.10) ... 122s Setting up gir1.2-glib-2.0:amd64 (2.84.0-1) ... 122s Setting up pciutils (1:3.13.0-2) ... 122s Setting up python3-rpds-py (0.21.0-2ubuntu2) ... 122s Setting up libmm-glib0:amd64 (1.23.4-0ubuntu3) ... 122s Setting up libnl-genl-3-200:amd64 (3.7.0-1) ... 122s Setting up libpam-systemd:amd64 (257.3-1ubuntu3) ... 122s Setting up libc6-dev:amd64 (2.41-1ubuntu1) ... 122s Setting up libgirepository-1.0-1:amd64 (1.83.4-1) ... 122s Setting up curl (8.12.1-3ubuntu1) ... 122s Setting up linux-image-virtual (6.14.0-10.10) ... 122s Setting up initramfs-tools-core (0.146ubuntu1) ... 122s Setting up linux-tools-common (6.14.0-10.10) ... 122s Setting up python3-systemd (235-1build6) ... 122s Setting up python3-cffi-backend:amd64 (1.17.1-2build2) ... 122s Setting up binutils-x86-64-linux-gnu (2.44-3ubuntu1) ... 122s Setting up linux-image-generic (6.14.0-10.10) ... 122s Setting up python3-dbus (1.3.2-5build5) ... 122s Setting up linux-tools-6.14.0-10 (6.14.0-10.10) ... 122s Setting up initramfs-tools (0.146ubuntu1) ... 122s Installing new version of config file /etc/kernel/postinst.d/initramfs-tools ... 122s Installing new version of config file /etc/kernel/postrm.d/initramfs-tools ... 122s update-initramfs: deferring update (trigger activated) 122s Setting up linux-generic (6.14.0-10.10) ... 122s Setting up ubuntu-minimal (1.549) ... 122s Setting up python3-apt (2.9.9build1) ... 122s Setting up python3-bcrypt (4.2.0-2.1build1) ... 123s Setting up python3-yaml (6.0.2-1build2) ... 123s Setting up libfwupd3:amd64 (2.0.6-4) ... 123s Setting up python3-lazr.uri (1.0.6-6) ... 123s Setting up binutils (2.44-3ubuntu1) ... 123s Setting up ubuntu-standard (1.549) ... 123s Setting up cloud-init-base (25.1-0ubuntu3) ... 124s Setting up linux-virtual (6.14.0-10.10) ... 124s Setting up gir1.2-girepository-2.0:amd64 (1.83.4-1) ... 124s Setting up python3-gi (3.50.0-4build1) ... 124s Setting up linux-tools-6.14.0-10-generic (6.14.0-10.10) ... 124s Setting up fwupd (2.0.6-4) ... 125s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 125s fwupd.service is a disabled or a static unit not running, not starting it. 125s Setting up cloud-init (25.1-0ubuntu3) ... 125s Processing triggers for man-db (2.13.0-1) ... 127s Processing triggers for dbus (1.16.2-1ubuntu1) ... 127s Processing triggers for shared-mime-info (2.4-5) ... 127s Warning: program compiled against libxml 212 using older 209 127s Processing triggers for libc-bin (2.41-1ubuntu1) ... 127s Processing triggers for linux-image-6.14.0-10-generic (6.14.0-10.10) ... 127s /etc/kernel/postinst.d/initramfs-tools: 127s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 127s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 138s /etc/kernel/postinst.d/zz-update-grub: 138s Sourcing file `/etc/default/grub' 138s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 138s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 138s Generating grub configuration file ... 138s Found linux image: /boot/vmlinuz-6.14.0-10-generic 138s Found initrd image: /boot/initrd.img-6.14.0-10-generic 138s Found linux image: /boot/vmlinuz-6.12.0-16-generic 138s Found initrd image: /boot/initrd.img-6.12.0-16-generic 138s Found linux image: /boot/vmlinuz-6.11.0-8-generic 138s Found initrd image: /boot/initrd.img-6.11.0-8-generic 139s Warning: os-prober will not be executed to detect other bootable partitions. 139s Systems on them will not be added to the GRUB boot configuration. 139s Check GRUB_DISABLE_OS_PROBER documentation entry. 139s Adding boot menu entry for UEFI Firmware Settings ... 139s done 139s Processing triggers for initramfs-tools (0.146ubuntu1) ... 139s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 139s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 149s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 149s + /usr/lib/apt/apt-helper analyze-pattern ?true 149s + uname -r 149s + sed s/\./\\./g 149s + running_kernel_pattern=^linux-.*6\.12\.0-16-generic.* 149s + apt list ?obsolete 149s + grep -v ^linux-.*6\.12\.0-16-generic.* 149s + tail -n+2 149s + cut -d/ -f1 151s + obsolete_pkgs=linux-headers-6.11.0-8-generic 151s linux-headers-6.11.0-8 151s linux-headers-6.12.0-16 151s linux-image-6.11.0-8-generic 151s linux-modules-6.11.0-8-generic 151s linux-tools-6.11.0-8-generic 151s linux-tools-6.11.0-8 151s linux-tools-6.12.0-16 151s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove linux-headers-6.11.0-8-generic linux-headers-6.11.0-8 linux-headers-6.12.0-16 linux-image-6.11.0-8-generic linux-modules-6.11.0-8-generic linux-tools-6.11.0-8-generic linux-tools-6.11.0-8 linux-tools-6.12.0-16 151s Reading package lists... 151s Building dependency tree... 151s Reading state information... 151s Solving dependencies... 151s The following packages will be REMOVED: 151s libnl-genl-3-200* libnsl2* libpython3.12-minimal* libpython3.12-stdlib* 151s libpython3.12t64* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 151s linux-headers-6.12.0-16* linux-headers-6.12.0-16-generic* 151s linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic* 151s linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic* linux-tools-6.12.0-16* 151s linux-tools-6.12.0-16-generic* 152s 0 upgraded, 0 newly installed, 15 to remove and 5 not upgraded. 152s After this operation, 371 MB disk space will be freed. 152s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 148643 files and directories currently installed.) 152s Removing libnl-genl-3-200:amd64 (3.7.0-1) ... 152s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 152s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 152s Removing libpython3.12t64:amd64 (3.12.9-1) ... 152s Removing libpython3.12-stdlib:amd64 (3.12.9-1) ... 152s Removing libnsl2:amd64 (1.3.0-3build3) ... 152s Removing libpython3.12-minimal:amd64 (3.12.9-1) ... 152s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 153s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 155s Removing linux-headers-6.12.0-16-generic (6.12.0-16.16) ... 156s Removing linux-headers-6.12.0-16 (6.12.0-16.16) ... 158s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 158s /etc/kernel/postrm.d/initramfs-tools: 158s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 158s /etc/kernel/postrm.d/zz-update-grub: 158s Sourcing file `/etc/default/grub' 158s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 158s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 158s Generating grub configuration file ... 158s Found linux image: /boot/vmlinuz-6.14.0-10-generic 158s Found initrd image: /boot/initrd.img-6.14.0-10-generic 159s Found linux image: /boot/vmlinuz-6.12.0-16-generic 159s Found initrd image: /boot/initrd.img-6.12.0-16-generic 159s Warning: os-prober will not be executed to detect other bootable partitions. 159s Systems on them will not be added to the GRUB boot configuration. 159s Check GRUB_DISABLE_OS_PROBER documentation entry. 159s Adding boot menu entry for UEFI Firmware Settings ... 159s done 159s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 159s Removing linux-tools-6.12.0-16-generic (6.12.0-16.16) ... 159s Removing linux-tools-6.12.0-16 (6.12.0-16.16) ... 159s Processing triggers for libc-bin (2.41-1ubuntu1) ... 159s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84830 files and directories currently installed.) 159s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 159s Purging configuration files for libpython3.12-minimal:amd64 (3.12.9-1) ... 159s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 159s + grep -q trusty /etc/lsb-release 159s + [ ! -d /usr/share/doc/unattended-upgrades ] 159s + [ ! -d /usr/share/doc/lxd ] 159s + [ ! -d /usr/share/doc/lxd-client ] 159s + [ ! -d /usr/share/doc/snapd ] 159s + type iptables 159s + cat 159s + chmod 755 /etc/rc.local 159s + . /etc/rc.local 159s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 159s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 159s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 159s + uname -m 159s + [ x86_64 = ppc64le ] 159s + [ -d /run/systemd/system ] 159s + systemd-detect-virt --quiet --vm 159s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 159s + cat 159s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 159s + echo COMPRESS=lz4 159s autopkgtest [22:17:06]: upgrading testbed (apt dist-upgrade and autopurge) 160s Reading package lists... 160s Building dependency tree... 160s Reading state information... 160s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 160s Starting 2 pkgProblemResolver with broken count: 0 160s Done 161s Entering ResolveByKeep 161s 161s Calculating upgrade... 161s The following packages will be upgraded: 161s libc-bin libc-dev-bin libc6 libc6-dev locales 162s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 162s Need to get 10.5 MB of archives. 162s After this operation, 1024 B of additional disk space will be used. 162s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6-dev amd64 2.41-1ubuntu2 [2183 kB] 162s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-dev-bin amd64 2.41-1ubuntu2 [24.7 kB] 162s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6 amd64 2.41-1ubuntu2 [3327 kB] 162s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-bin amd64 2.41-1ubuntu2 [700 kB] 162s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 locales all 2.41-1ubuntu2 [4246 kB] 163s Preconfiguring packages ... 163s Fetched 10.5 MB in 1s (11.2 MB/s) 163s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84827 files and directories currently installed.) 163s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_amd64.deb ... 163s Unpacking libc6-dev:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 163s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_amd64.deb ... 163s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 163s Preparing to unpack .../libc6_2.41-1ubuntu2_amd64.deb ... 163s Unpacking libc6:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 163s Setting up libc6:amd64 (2.41-1ubuntu2) ... 164s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84827 files and directories currently installed.) 164s Preparing to unpack .../libc-bin_2.41-1ubuntu2_amd64.deb ... 164s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 164s Setting up libc-bin (2.41-1ubuntu2) ... 164s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84827 files and directories currently installed.) 164s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 164s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 164s Setting up locales (2.41-1ubuntu2) ... 165s Generating locales (this might take a while)... 166s en_US.UTF-8... done 166s Generation complete. 166s Setting up libc-dev-bin (2.41-1ubuntu2) ... 166s Setting up libc6-dev:amd64 (2.41-1ubuntu2) ... 166s Processing triggers for man-db (2.13.0-1) ... 167s Processing triggers for systemd (257.3-1ubuntu3) ... 168s Reading package lists... 168s Building dependency tree... 168s Reading state information... 168s Starting pkgProblemResolver with broken count: 0 168s Starting 2 pkgProblemResolver with broken count: 0 168s Done 169s Solving dependencies... 169s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 169s autopkgtest [22:17:16]: rebooting testbed after setup commands that affected boot 188s autopkgtest [22:17:35]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 16:07:00 UTC 2025 190s autopkgtest [22:17:37]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-libcoin 192s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-libcoin 1.0-10-1 (dsc) [2121 B] 192s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-libcoin 1.0-10-1 (tar) [848 kB] 192s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-libcoin 1.0-10-1 (diff) [2468 B] 193s gpgv: Signature made Sat Oct 14 06:06:56 2023 UTC 193s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 193s gpgv: issuer "tille@debian.org" 193s gpgv: Can't check signature: No public key 193s dpkg-source: warning: cannot verify inline signature for ./r-cran-libcoin_1.0-10-1.dsc: no acceptable signature found 193s autopkgtest [22:17:40]: testing package r-cran-libcoin version 1.0-10-1 193s autopkgtest [22:17:40]: build not needed 198s autopkgtest [22:17:45]: test run-unit-test: preparing testbed 198s Reading package lists... 198s Building dependency tree... 198s Reading state information... 199s Starting pkgProblemResolver with broken count: 0 199s Starting 2 pkgProblemResolver with broken count: 0 199s Done 199s The following NEW packages will be installed: 199s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3 199s libcairo2 libdatrie1 libdeflate0 libfontconfig1 libgfortran5 libgomp1 199s libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8 199s liblapack3 liblerc4 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 199s libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6 199s libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0 199s libxft2 libxrender1 libxss1 libxt6t64 r-base-core r-cran-codetools 199s r-cran-coin r-cran-lattice r-cran-libcoin r-cran-mass r-cran-matrix 199s r-cran-matrixstats r-cran-modeltools r-cran-multcomp r-cran-mvtnorm 199s r-cran-sandwich r-cran-survival r-cran-th.data r-cran-zoo unzip x11-common 199s xdg-utils zip 199s 0 upgraded, 58 newly installed, 0 to remove and 0 not upgraded. 199s Need to get 72.3 MB of archives. 199s After this operation, 127 MB of additional disk space will be used. 199s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 200s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 200s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-2ubuntu1 [37.4 kB] 200s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-2ubuntu1 [164 kB] 200s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-2ubuntu1 [180 kB] 200s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 200s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 200s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 200s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 200s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 200s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 200s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 200s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB] 200s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 15-20250222-0ubuntu1 [919 kB] 200s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 15-20250222-0ubuntu1 [148 kB] 200s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 200s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB] 200s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 200s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 200s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 200s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 200s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 200s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 200s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 200s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 200s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.56.2-1 [255 kB] 200s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.56.2-1 [52.6 kB] 200s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.56.2-1 [29.1 kB] 200s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB] 200s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB] 200s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 200s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 200s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB] 200s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 200s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 200s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 200s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 200s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 200s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB] 200s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 200s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu2 [185 kB] 200s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 200s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 200s Get:44 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.3-1 [28.9 MB] 201s Get:45 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-codetools all 0.2-20-1 [90.5 kB] 201s Get:46 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 201s Get:47 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrix amd64 1.7-3-1 [4349 kB] 201s Get:48 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-survival amd64 3.8-3-1 [8239 kB] 201s Get:49 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mvtnorm amd64 1.3-3-1 [923 kB] 202s Get:50 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-libcoin amd64 1.0-10-1 [767 kB] 202s Get:51 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixstats amd64 1.5.0-1 [542 kB] 202s Get:52 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-modeltools all 0.2-23-2build1 [219 kB] 202s Get:53 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mass amd64 7.3-64-1 [1114 kB] 202s Get:54 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-th.data all 1.1-3-1 [8723 kB] 202s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-zoo amd64 1.8-13-1 [999 kB] 202s Get:56 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sandwich all 3.1-1-1 [1483 kB] 202s Get:57 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-multcomp all 1.4-28-1 [700 kB] 202s Get:58 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-coin amd64 1.4-3-1 [1560 kB] 202s Preconfiguring packages ... 202s Fetched 72.3 MB in 3s (27.5 MB/s) 202s Selecting previously unselected package fonts-dejavu-mono. 203s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84827 files and directories currently installed.) 203s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8_all.deb ... 203s Unpacking fonts-dejavu-mono (2.37-8) ... 203s Selecting previously unselected package fonts-dejavu-core. 203s Preparing to unpack .../01-fonts-dejavu-core_2.37-8_all.deb ... 203s Unpacking fonts-dejavu-core (2.37-8) ... 203s Selecting previously unselected package fontconfig-config. 203s Preparing to unpack .../02-fontconfig-config_2.15.0-2ubuntu1_amd64.deb ... 203s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 203s Selecting previously unselected package libfontconfig1:amd64. 203s Preparing to unpack .../03-libfontconfig1_2.15.0-2ubuntu1_amd64.deb ... 203s Unpacking libfontconfig1:amd64 (2.15.0-2ubuntu1) ... 203s Selecting previously unselected package fontconfig. 203s Preparing to unpack .../04-fontconfig_2.15.0-2ubuntu1_amd64.deb ... 203s Unpacking fontconfig (2.15.0-2ubuntu1) ... 203s Selecting previously unselected package libblas3:amd64. 203s Preparing to unpack .../05-libblas3_3.12.1-2_amd64.deb ... 203s Unpacking libblas3:amd64 (3.12.1-2) ... 203s Selecting previously unselected package libpixman-1-0:amd64. 203s Preparing to unpack .../06-libpixman-1-0_0.44.0-3_amd64.deb ... 203s Unpacking libpixman-1-0:amd64 (0.44.0-3) ... 203s Selecting previously unselected package libxcb-render0:amd64. 203s Preparing to unpack .../07-libxcb-render0_1.17.0-2_amd64.deb ... 203s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 203s Selecting previously unselected package libxcb-shm0:amd64. 203s Preparing to unpack .../08-libxcb-shm0_1.17.0-2_amd64.deb ... 203s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 203s Selecting previously unselected package libxrender1:amd64. 203s Preparing to unpack .../09-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 203s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 203s Selecting previously unselected package libcairo2:amd64. 203s Preparing to unpack .../10-libcairo2_1.18.2-2_amd64.deb ... 203s Unpacking libcairo2:amd64 (1.18.2-2) ... 203s Selecting previously unselected package libdatrie1:amd64. 203s Preparing to unpack .../11-libdatrie1_0.2.13-3build1_amd64.deb ... 203s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 203s Selecting previously unselected package libdeflate0:amd64. 203s Preparing to unpack .../12-libdeflate0_1.23-1_amd64.deb ... 203s Unpacking libdeflate0:amd64 (1.23-1) ... 203s Selecting previously unselected package libgfortran5:amd64. 203s Preparing to unpack .../13-libgfortran5_15-20250222-0ubuntu1_amd64.deb ... 203s Unpacking libgfortran5:amd64 (15-20250222-0ubuntu1) ... 203s Selecting previously unselected package libgomp1:amd64. 203s Preparing to unpack .../14-libgomp1_15-20250222-0ubuntu1_amd64.deb ... 203s Unpacking libgomp1:amd64 (15-20250222-0ubuntu1) ... 203s Selecting previously unselected package libgraphite2-3:amd64. 203s Preparing to unpack .../15-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 203s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 203s Selecting previously unselected package libharfbuzz0b:amd64. 203s Preparing to unpack .../16-libharfbuzz0b_10.2.0-1_amd64.deb ... 203s Unpacking libharfbuzz0b:amd64 (10.2.0-1) ... 203s Selecting previously unselected package x11-common. 203s Preparing to unpack .../17-x11-common_1%3a7.7+23ubuntu3_all.deb ... 203s Unpacking x11-common (1:7.7+23ubuntu3) ... 203s Selecting previously unselected package libice6:amd64. 203s Preparing to unpack .../18-libice6_2%3a1.1.1-1_amd64.deb ... 203s Unpacking libice6:amd64 (2:1.1.1-1) ... 204s Selecting previously unselected package libjpeg-turbo8:amd64. 204s Preparing to unpack .../19-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ... 204s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 204s Selecting previously unselected package libjpeg8:amd64. 204s Preparing to unpack .../20-libjpeg8_8c-2ubuntu11_amd64.deb ... 204s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 204s Selecting previously unselected package liblapack3:amd64. 204s Preparing to unpack .../21-liblapack3_3.12.1-2_amd64.deb ... 204s Unpacking liblapack3:amd64 (3.12.1-2) ... 204s Selecting previously unselected package liblerc4:amd64. 204s Preparing to unpack .../22-liblerc4_4.0.0+ds-5ubuntu1_amd64.deb ... 204s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 204s Selecting previously unselected package libthai-data. 204s Preparing to unpack .../23-libthai-data_0.1.29-2build1_all.deb ... 204s Unpacking libthai-data (0.1.29-2build1) ... 204s Selecting previously unselected package libthai0:amd64. 204s Preparing to unpack .../24-libthai0_0.1.29-2build1_amd64.deb ... 204s Unpacking libthai0:amd64 (0.1.29-2build1) ... 204s Selecting previously unselected package libpango-1.0-0:amd64. 204s Preparing to unpack .../25-libpango-1.0-0_1.56.2-1_amd64.deb ... 204s Unpacking libpango-1.0-0:amd64 (1.56.2-1) ... 204s Selecting previously unselected package libpangoft2-1.0-0:amd64. 204s Preparing to unpack .../26-libpangoft2-1.0-0_1.56.2-1_amd64.deb ... 204s Unpacking libpangoft2-1.0-0:amd64 (1.56.2-1) ... 204s Selecting previously unselected package libpangocairo-1.0-0:amd64. 204s Preparing to unpack .../27-libpangocairo-1.0-0_1.56.2-1_amd64.deb ... 204s Unpacking libpangocairo-1.0-0:amd64 (1.56.2-1) ... 204s Selecting previously unselected package libpaper2:amd64. 204s Preparing to unpack .../28-libpaper2_2.2.5-0.3_amd64.deb ... 204s Unpacking libpaper2:amd64 (2.2.5-0.3) ... 204s Selecting previously unselected package libpaper-utils. 204s Preparing to unpack .../29-libpaper-utils_2.2.5-0.3_amd64.deb ... 204s Unpacking libpaper-utils (2.2.5-0.3) ... 204s Selecting previously unselected package libsharpyuv0:amd64. 204s Preparing to unpack .../30-libsharpyuv0_1.5.0-0.1_amd64.deb ... 204s Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ... 204s Selecting previously unselected package libsm6:amd64. 204s Preparing to unpack .../31-libsm6_2%3a1.2.4-1_amd64.deb ... 204s Unpacking libsm6:amd64 (2:1.2.4-1) ... 204s Selecting previously unselected package libtcl8.6:amd64. 204s Preparing to unpack .../32-libtcl8.6_8.6.16+dfsg-1_amd64.deb ... 204s Unpacking libtcl8.6:amd64 (8.6.16+dfsg-1) ... 204s Selecting previously unselected package libjbig0:amd64. 204s Preparing to unpack .../33-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 204s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 204s Selecting previously unselected package libwebp7:amd64. 204s Preparing to unpack .../34-libwebp7_1.5.0-0.1_amd64.deb ... 204s Unpacking libwebp7:amd64 (1.5.0-0.1) ... 204s Selecting previously unselected package libtiff6:amd64. 204s Preparing to unpack .../35-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ... 204s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 204s Selecting previously unselected package libxft2:amd64. 204s Preparing to unpack .../36-libxft2_2.3.6-1build1_amd64.deb ... 204s Unpacking libxft2:amd64 (2.3.6-1build1) ... 204s Selecting previously unselected package libxss1:amd64. 204s Preparing to unpack .../37-libxss1_1%3a1.2.3-1build3_amd64.deb ... 204s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 204s Selecting previously unselected package libtk8.6:amd64. 204s Preparing to unpack .../38-libtk8.6_8.6.16-1_amd64.deb ... 204s Unpacking libtk8.6:amd64 (8.6.16-1) ... 204s Selecting previously unselected package libxt6t64:amd64. 204s Preparing to unpack .../39-libxt6t64_1%3a1.2.1-1.2build1_amd64.deb ... 204s Unpacking libxt6t64:amd64 (1:1.2.1-1.2build1) ... 204s Selecting previously unselected package zip. 204s Preparing to unpack .../40-zip_3.0-14ubuntu2_amd64.deb ... 204s Unpacking zip (3.0-14ubuntu2) ... 204s Selecting previously unselected package unzip. 204s Preparing to unpack .../41-unzip_6.0-28ubuntu6_amd64.deb ... 204s Unpacking unzip (6.0-28ubuntu6) ... 204s Selecting previously unselected package xdg-utils. 204s Preparing to unpack .../42-xdg-utils_1.2.1-2ubuntu1_all.deb ... 204s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 204s Selecting previously unselected package r-base-core. 204s Preparing to unpack .../43-r-base-core_4.4.3-1_amd64.deb ... 204s Unpacking r-base-core (4.4.3-1) ... 205s Selecting previously unselected package r-cran-codetools. 205s Preparing to unpack .../44-r-cran-codetools_0.2-20-1_all.deb ... 205s Unpacking r-cran-codetools (0.2-20-1) ... 205s Selecting previously unselected package r-cran-lattice. 205s Preparing to unpack .../45-r-cran-lattice_0.22-6-1_amd64.deb ... 205s Unpacking r-cran-lattice (0.22-6-1) ... 205s Selecting previously unselected package r-cran-matrix. 205s Preparing to unpack .../46-r-cran-matrix_1.7-3-1_amd64.deb ... 205s Unpacking r-cran-matrix (1.7-3-1) ... 205s Selecting previously unselected package r-cran-survival. 205s Preparing to unpack .../47-r-cran-survival_3.8-3-1_amd64.deb ... 205s Unpacking r-cran-survival (3.8-3-1) ... 205s Selecting previously unselected package r-cran-mvtnorm. 205s Preparing to unpack .../48-r-cran-mvtnorm_1.3-3-1_amd64.deb ... 205s Unpacking r-cran-mvtnorm (1.3-3-1) ... 205s Selecting previously unselected package r-cran-libcoin. 205s Preparing to unpack .../49-r-cran-libcoin_1.0-10-1_amd64.deb ... 205s Unpacking r-cran-libcoin (1.0-10-1) ... 205s Selecting previously unselected package r-cran-matrixstats. 205s Preparing to unpack .../50-r-cran-matrixstats_1.5.0-1_amd64.deb ... 205s Unpacking r-cran-matrixstats (1.5.0-1) ... 205s Selecting previously unselected package r-cran-modeltools. 205s Preparing to unpack .../51-r-cran-modeltools_0.2-23-2build1_all.deb ... 205s Unpacking r-cran-modeltools (0.2-23-2build1) ... 205s Selecting previously unselected package r-cran-mass. 205s Preparing to unpack .../52-r-cran-mass_7.3-64-1_amd64.deb ... 205s Unpacking r-cran-mass (7.3-64-1) ... 205s Selecting previously unselected package r-cran-th.data. 205s Preparing to unpack .../53-r-cran-th.data_1.1-3-1_all.deb ... 205s Unpacking r-cran-th.data (1.1-3-1) ... 205s Selecting previously unselected package r-cran-zoo. 205s Preparing to unpack .../54-r-cran-zoo_1.8-13-1_amd64.deb ... 205s Unpacking r-cran-zoo (1.8-13-1) ... 205s Selecting previously unselected package r-cran-sandwich. 205s Preparing to unpack .../55-r-cran-sandwich_3.1-1-1_all.deb ... 205s Unpacking r-cran-sandwich (3.1-1-1) ... 205s Selecting previously unselected package r-cran-multcomp. 205s Preparing to unpack .../56-r-cran-multcomp_1.4-28-1_all.deb ... 205s Unpacking r-cran-multcomp (1.4-28-1) ... 205s Selecting previously unselected package r-cran-coin. 205s Preparing to unpack .../57-r-cran-coin_1.4-3-1_amd64.deb ... 205s Unpacking r-cran-coin (1.4-3-1) ... 205s Setting up libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 205s Setting up libpixman-1-0:amd64 (0.44.0-3) ... 205s Setting up libsharpyuv0:amd64 (1.5.0-0.1) ... 205s Setting up liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 205s Setting up libxrender1:amd64 (1:0.9.10-1.1build1) ... 205s Setting up libdatrie1:amd64 (0.2.13-3build1) ... 205s Setting up libxcb-render0:amd64 (1.17.0-2) ... 205s Setting up unzip (6.0-28ubuntu6) ... 205s Setting up x11-common (1:7.7+23ubuntu3) ... 206s Setting up libdeflate0:amd64 (1.23-1) ... 206s Setting up libxcb-shm0:amd64 (1.17.0-2) ... 206s Setting up libgomp1:amd64 (15-20250222-0ubuntu1) ... 206s Setting up libjbig0:amd64 (2.1-6.1ubuntu2) ... 206s Setting up zip (3.0-14ubuntu2) ... 206s Setting up libblas3:amd64 (3.12.1-2) ... 206s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide 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(0.22-6-1) ... 208s Setting up r-cran-modeltools (0.2-23-2build1) ... 208s Setting up r-cran-codetools (0.2-20-1) ... 208s Setting up r-cran-matrixstats (1.5.0-1) ... 208s Setting up r-cran-mass (7.3-64-1) ... 208s Setting up r-cran-mvtnorm (1.3-3-1) ... 208s Setting up r-cran-zoo (1.8-13-1) ... 208s Setting up r-cran-matrix (1.7-3-1) ... 208s Setting up r-cran-libcoin (1.0-10-1) ... 209s Setting up r-cran-sandwich (3.1-1-1) ... 209s Setting up r-cran-survival (3.8-3-1) ... 209s Setting up r-cran-th.data (1.1-3-1) ... 209s Setting up r-cran-multcomp (1.4-28-1) ... 209s Setting up r-cran-coin (1.4-3-1) ... 209s Processing triggers for libc-bin (2.41-1ubuntu2) ... 209s Processing triggers for man-db (2.13.0-1) ... 210s Processing triggers for install-info (7.1.1-1) ... 211s autopkgtest [22:17:58]: test run-unit-test: [----------------------- 211s BEGIN TEST bugfixes.R 211s 211s R version 4.4.3 (2025-02-28) -- "Trophy Case" 211s Copyright (C) 2025 The R Foundation for Statistical Computing 211s Platform: x86_64-pc-linux-gnu 211s 211s R is free software and comes with ABSOLUTELY NO WARRANTY. 211s You are welcome to redistribute it under certain conditions. 211s Type 'license()' or 'licence()' for distribution details. 211s 211s R is a collaborative project with many contributors. 211s Type 'contributors()' for more information and 211s 'citation()' on how to cite R or R packages in publications. 211s 211s Type 'demo()' for some demos, 'help()' for on-line help, or 211s 'help.start()' for an HTML browser interface to help. 211s Type 'q()' to quit R. 211s 212s > 212s > library("libcoin") 212s > 212s > ### by Henric Winell 212s > set.seed(29) 212s > X <- runif(10) 212s > Y <- runif(10) 212s > o <- LinStatExpCov(X, Y) 212s > ov <- LinStatExpCov(X, Y, varonly = TRUE) 212s > stopifnot(all.equal(doTest(o, teststat = "scalar"), 212s + doTest(ov, teststat = "scalar"))) 212s > 212s > ### all weights = 0 and no weights at all was treated the same 212s > X <- as.double(1:10) 212s > Y <- as.double(10:1) 212s > sum(X*Y) 212s [1] 220 212s > cl <- gl(2, 5) 212s > 212s > ### linstat = 220 212s > w <- as.integer(rep(1, 10)) 212s > LinStatExpCov(X = X, Y = Y) 212s $LinearStatistic 212s [1] 220 212s 212s $Expectation 212s [1] 302.5 212s 212s $Covariance 212s [1] 756.25 212s 212s $Variance 212s [1] 756.25 212s 212s $ExpectationX 212s [1] 55 212s 212s $varonly 212s [1] FALSE 212s 212s $dimension 212s [1] 1 1 212s 212s $ExpectationInfluence 212s [1] 5.5 212s 212s $CovarianceInfluence 212s [1] 8.25 212s 212s $VarianceInfluence 212s [1] 8.25 212s 212s $Xfactor 212s [1] FALSE 212s 212s $tol 212s [1] 1.490116e-08 212s 212s $PermutedLinearStatistic 212s <0 x 0 matrix> 212s 212s $StandardisedPermutedLinearStatistic 212s <0 x 0 matrix> 212s 212s $TableBlock 212s [1] 0 10 212s 212s $Sumweights 212s [1] 10 212s 212s $Table 212s NULL 212s 212s attr(,"class") 212s [1] "LinStatExpCov1d" "LinStatExpCov" 212s > LinStatExpCov(X = X, Y = Y, weights = w) 212s $LinearStatistic 212s [1] 220 212s 212s $Expectation 212s [1] 302.5 212s 212s $Covariance 212s [1] 756.25 212s 212s $Variance 212s [1] 756.25 212s 212s $ExpectationX 212s [1] 55 212s 212s $varonly 212s [1] FALSE 212s 212s $dimension 212s [1] 1 1 212s 212s $ExpectationInfluence 212s [1] 5.5 212s 212s $CovarianceInfluence 212s [1] 8.25 212s 212s $VarianceInfluence 212s [1] 8.25 212s 212s $Xfactor 212s [1] FALSE 212s 212s $tol 212s [1] 1.490116e-08 212s 212s $PermutedLinearStatistic 212s <0 x 0 matrix> 212s 212s $StandardisedPermutedLinearStatistic 212s <0 x 0 matrix> 212s 212s $TableBlock 212s [1] 0 10 212s 212s $Sumweights 212s [1] 10 212s 212s $Table 212s NULL 212s 212s attr(,"class") 212s [1] "LinStatExpCov1d" "LinStatExpCov" 212s > LinStatExpCov(X = X, Y = Y, weights = w, block = cl) 212s $LinearStatistic 212s [1] 220 212s 212s $Expectation 212s [1] 240 212s 212s $Covariance 212s [1] 50 212s 212s $Variance 212s [1] 50 212s 212s $ExpectationX 212s [1] 55 212s 212s $varonly 212s [1] FALSE 212s 212s $dimension 212s [1] 1 1 212s 212s $ExpectationInfluence 212s [1] 8 3 212s 212s $CovarianceInfluence 212s [1] 2 2 212s 212s $VarianceInfluence 212s [1] 2 2 212s 212s $Xfactor 212s [1] FALSE 212s 212s $tol 212s [1] 1.490116e-08 212s 212s $PermutedLinearStatistic 212s <0 x 0 matrix> 212s 212s $StandardisedPermutedLinearStatistic 212s <0 x 0 matrix> 212s 212s $TableBlock 212s [1] 0 5 5 212s 212s $Sumweights 212s [1] 5 5 212s 212s $Table 212s NULL 212s 212s attr(,"class") 212s [1] "LinStatExpCov1d" "LinStatExpCov" 212s > 212s > ### linstat = 0 212s > w <- as.integer(rep(0, 10)) 212s > LinStatExpCov(X = X, Y = Y, weights = w) 212s $LinearStatistic 212s [1] 0 212s 212s $Expectation 212s [1] 0 212s 212s $Covariance 212s [1] 0 212s 212s $Variance 212s [1] 0 212s 212s $ExpectationX 212s [1] 0 212s 212s $varonly 212s [1] FALSE 212s 212s $dimension 212s [1] 1 1 212s 212s $ExpectationInfluence 212s [1] 0 212s 212s $CovarianceInfluence 212s [1] 0 212s 212s $VarianceInfluence 212s [1] 0 212s 212s $Xfactor 212s [1] FALSE 212s 212s $tol 212s [1] 1.490116e-08 212s 212s $PermutedLinearStatistic 212s <0 x 0 matrix> 212s 212s $StandardisedPermutedLinearStatistic 212s <0 x 0 matrix> 212s 212s $TableBlock 212s [1] 0 10 212s 212s $Sumweights 212s [1] 0 212s 212s $Table 212s NULL 212s 212s attr(,"class") 212s [1] "LinStatExpCov1d" "LinStatExpCov" 212s > LinStatExpCov(X = X, Y = Y, weights = w, block = cl) 212s $LinearStatistic 212s [1] 0 212s 212s $Expectation 212s [1] 0 212s 212s $Covariance 212s [1] 0 212s 212s $Variance 212s [1] 0 212s 212s $ExpectationX 212s [1] 0 212s 212s $varonly 212s [1] FALSE 212s 212s $dimension 212s [1] 1 1 212s 212s $ExpectationInfluence 212s [1] 0 0 212s 212s $CovarianceInfluence 212s [1] 0 0 212s 212s $VarianceInfluence 212s [1] 0 0 212s 212s $Xfactor 212s [1] FALSE 212s 212s $tol 212s [1] 1.490116e-08 212s 212s $PermutedLinearStatistic 212s <0 x 0 matrix> 212s 212s $StandardisedPermutedLinearStatistic 212s <0 x 0 matrix> 212s 212s $TableBlock 212s [1] 0 5 5 212s 212s $Sumweights 212s [1] 0 0 212s 212s $Table 212s NULL 212s 212s attr(,"class") 212s [1] "LinStatExpCov1d" "LinStatExpCov" 212s > 212s > ### linstat = 110 212s > w <- as.integer(rep(0, 10)) 212s > w[1:5] <- 1L 212s > LinStatExpCov(X = X, Y = Y, subset = 1:5) 212s $LinearStatistic 212s [1] 110 212s 212s $Expectation 212s [1] 120 212s 212s $Covariance 212s [1] 25 212s 212s $Variance 212s [1] 25 212s 212s $ExpectationX 212s [1] 15 212s 212s $varonly 212s [1] FALSE 212s 212s $dimension 212s [1] 1 1 212s 212s $ExpectationInfluence 212s [1] 8 212s 212s $CovarianceInfluence 212s [1] 2 212s 212s $VarianceInfluence 212s [1] 2 212s 212s $Xfactor 212s [1] FALSE 212s 212s $tol 212s [1] 1.490116e-08 212s 212s $PermutedLinearStatistic 212s <0 x 0 matrix> 212s 212s $StandardisedPermutedLinearStatistic 212s <0 x 0 matrix> 212s 212s $TableBlock 212s [1] 0 5 212s 212s $Sumweights 212s [1] 5 212s 212s $Table 212s NULL 212s 212s attr(,"class") 212s [1] "LinStatExpCov1d" "LinStatExpCov" 212s > LinStatExpCov(X = X, Y = Y, weights = w) 212s $LinearStatistic 212s [1] 110 212s 212s $Expectation 212s [1] 120 212s 212s $Covariance 212s [1] 25 212s 212s $Variance 212s [1] 25 212s 212s $ExpectationX 212s [1] 15 212s 212s $varonly 212s [1] FALSE 212s 212s $dimension 212s [1] 1 1 212s 212s $ExpectationInfluence 212s [1] 8 212s 212s $CovarianceInfluence 212s [1] 2 212s 212s $VarianceInfluence 212s [1] 2 212s 212s $Xfactor 212s [1] FALSE 212s 212s $tol 212s [1] 1.490116e-08 212s 212s $PermutedLinearStatistic 212s <0 x 0 matrix> 212s 212s $StandardisedPermutedLinearStatistic 212s <0 x 0 matrix> 212s 212s $TableBlock 212s [1] 0 10 212s 212s $Sumweights 212s [1] 5 212s 212s $Table 212s NULL 212s 212s attr(,"class") 212s [1] "LinStatExpCov1d" "LinStatExpCov" 212s > LinStatExpCov(X = X, Y = Y, weights = w, block = cl) 212s $LinearStatistic 212s [1] 110 212s 212s $Expectation 212s [1] 120 212s 212s $Covariance 212s [1] 25 212s 212s $Variance 212s [1] 25 212s 212s $ExpectationX 212s [1] 15 212s 212s $varonly 212s [1] FALSE 212s 212s $dimension 212s [1] 1 1 212s 212s $ExpectationInfluence 212s [1] 8 0 212s 212s $CovarianceInfluence 212s [1] 2 0 212s 212s $VarianceInfluence 212s [1] 2 0 212s 212s $Xfactor 212s [1] FALSE 212s 212s $tol 212s [1] 1.490116e-08 212s 212s $PermutedLinearStatistic 212s <0 x 0 matrix> 212s 212s $StandardisedPermutedLinearStatistic 212s <0 x 0 matrix> 212s 212s $TableBlock 212s [1] 0 5 5 212s 212s $Sumweights 212s [1] 5 0 212s 212s $Table 212s NULL 212s 212s attr(,"class") 212s [1] "LinStatExpCov1d" "LinStatExpCov" 212s > 212s > ### linstat = 0 212s > LinStatExpCov(X = X, Y = Y, weights = w, subset = 6:10) 212s $LinearStatistic 212s [1] 0 212s 212s $Expectation 212s [1] 0 212s 212s $Covariance 212s [1] 0 212s 212s $Variance 212s [1] 0 212s 212s $ExpectationX 212s [1] 0 212s 212s $varonly 212s [1] FALSE 212s 212s $dimension 212s [1] 1 1 212s 212s $ExpectationInfluence 212s [1] 0 212s 212s $CovarianceInfluence 212s [1] 0 212s 212s $VarianceInfluence 212s [1] 0 212s 212s $Xfactor 212s [1] FALSE 212s 212s $tol 212s [1] 1.490116e-08 212s 212s $PermutedLinearStatistic 212s <0 x 0 matrix> 212s 212s $StandardisedPermutedLinearStatistic 212s <0 x 0 matrix> 212s 212s $TableBlock 212s [1] 0 5 212s 212s $Sumweights 212s [1] 0 212s 212s $Table 212s NULL 212s 212s attr(,"class") 212s [1] "LinStatExpCov1d" "LinStatExpCov" 212s > LinStatExpCov(X = X, Y = Y, weights = w, block = cl, subset = 6:10) 212s $LinearStatistic 212s [1] 0 212s 212s $Expectation 212s [1] 0 212s 212s $Covariance 212s [1] 0 212s 212s $Variance 212s [1] 0 212s 212s $ExpectationX 212s [1] 0 212s 212s $varonly 212s [1] FALSE 212s 212s $dimension 212s [1] 1 1 212s 212s $ExpectationInfluence 212s [1] 0 0 212s 212s $CovarianceInfluence 212s [1] 0 0 212s 212s $VarianceInfluence 212s [1] 0 0 212s 212s $Xfactor 212s [1] FALSE 212s 212s $tol 212s [1] 1.490116e-08 212s 212s $PermutedLinearStatistic 212s <0 x 0 matrix> 212s 212s $StandardisedPermutedLinearStatistic 212s <0 x 0 matrix> 212s 212s $TableBlock 212s [1] 0 0 5 212s 212s $Sumweights 212s [1] 0 0 212s 212s $Table 212s NULL 212s 212s attr(,"class") 212s [1] "LinStatExpCov1d" "LinStatExpCov" 212s > 212s > ### missing values in 1d and 2d case 212s > x <- gl(6, 20) 212s > y <- gl(3, 40) 212s > x[sample(1:length(x), 10)] <- NA 212s > y[sample(1:length(y), 10)] <- NA 212s > 212s > X <- matrix(NA, nrow = length(x), ncol = nlevels(x)) 212s > X[!is.na(x),] <- model.matrix(~ x - 1) 212s > Y <- matrix(NA, nrow = length(y), ncol = nlevels(y)) 212s > Y[!is.na(y),] <- model.matrix(~ y - 1) 212s > 212s > lev1 <- LinStatExpCov(X = X, Y = Y) 212s > lev1$Sumweights 212s [1] 100 212s > t1 <- doTest(lev1, teststat = "quadratic") 212s > 212s > X <- rbind(0, diag(nlevels(x))) 212s > Y <- rbind(0, diag(nlevels(y))) 212s > ix <- unclass(x) 212s > ix[is.na(ix)] <- 0L 212s > iy <- unclass(y) 212s > iy[is.na(iy)] <- 0L 212s > levels(ix) <- levels(x) 212s > levels(iy) <- levels(y) 212s > 212s > lev2 <- LinStatExpCov(X = X, Y = Y, ix = ix, iy = iy) 212s > lev2$Sumweights 212s [1] 100 212s > t2 <- doTest(lev2, teststat = "quadratic") 212s > stopifnot(all.equal(t1, t2)) 212s > 212s > ### unnecessary memory allocation; fixed in 1.0-2 212s > N <- 146341L 212s > y <- runif(N) 212s > x <- 1:N 212s > lev1 <- LinStatExpCov(X = x, Y = y, varonly = TRUE) 212s > # Note: N * (N + 1) / 2 > .Machine$integer.max 212s > try(lev2 <- LinStatExpCov(X = x, Y = y, varonly = FALSE)) 212s > 212s > 212s BEGIN TEST regtest_ctabs.R 212s Error in .LinStatExpCov1d(X = X, Y = Y, weights = weights, subset = subset, : 212s cannot allocate memory: number of levels too large 212s 212s R version 4.4.3 (2025-02-28) -- "Trophy Case" 212s Copyright (C) 2025 The R Foundation for Statistical Computing 212s Platform: x86_64-pc-linux-gnu 212s 212s R is free software and comes with ABSOLUTELY NO WARRANTY. 212s You are welcome to redistribute it under certain conditions. 212s Type 'license()' or 'licence()' for distribution details. 212s 212s R is a collaborative project with many contributors. 212s Type 'contributors()' for more information and 212s 'citation()' on how to cite R or R packages in publications. 212s 212s Type 'demo()' for some demos, 'help()' for on-line help, or 212s 'help.start()' for an HTML browser interface to help. 212s Type 'q()' to quit R. 212s 212s > 212s > library("libcoin") 212s > 212s > x <- 1:6 212s > y <- rep(1:3, length.out = 6) 212s > w <- rep(2L, length(x)) 212s > b <- gl(2, 3) 212s > s <- 1:4 212s > 212s > ctabs(x) 212s [1] 0 1 1 1 1 1 1 212s > ctabs(x, weights = w) 212s [1] 0 2 2 2 2 2 2 212s > ctabs(x, subset = s) 212s [1] 0 1 1 1 1 0 0 212s > ctabs(x, weights = w, subset = s) 212s [1] 0 2 2 2 2 0 0 212s > ctabs(x, block = b) 212s [,1] [,2] 212s [1,] 0 0 212s [2,] 1 0 212s [3,] 1 0 212s [4,] 1 0 212s [5,] 0 1 212s [6,] 0 1 212s [7,] 0 1 212s > ctabs(x, weights = w, block = b) 212s [,1] [,2] 212s [1,] 0 0 212s [2,] 2 0 212s [3,] 2 0 212s [4,] 2 0 212s [5,] 0 2 212s [6,] 0 2 212s [7,] 0 2 212s > ctabs(x, subset = s, block = b) 212s [,1] [,2] 212s [1,] 0 0 212s [2,] 1 0 212s [3,] 1 0 212s [4,] 1 0 212s [5,] 0 1 212s [6,] 0 0 212s [7,] 0 0 212s > ctabs(x, weights = w, subset = s, block = b) 212s [,1] [,2] 212s [1,] 0 0 212s [2,] 2 0 212s [3,] 2 0 212s [4,] 2 0 212s [5,] 0 2 212s [6,] 0 0 212s [7,] 0 0 212s > 212s > ctabs(x, y) 212s [,1] [,2] [,3] [,4] 212s [1,] 0 0 0 0 212s [2,] 0 1 0 0 212s [3,] 0 0 1 0 212s [4,] 0 0 0 1 212s [5,] 0 1 0 0 212s [6,] 0 0 1 0 212s [7,] 0 0 0 1 212s > ctabs(x, y, weights = w) 212s [,1] [,2] [,3] [,4] 212s [1,] 0 0 0 0 212s [2,] 0 2 0 0 212s [3,] 0 0 2 0 212s [4,] 0 0 0 2 212s [5,] 0 2 0 0 212s [6,] 0 0 2 0 212s [7,] 0 0 0 2 212s > ctabs(x, y, subset = s) 212s [,1] [,2] [,3] [,4] 212s [1,] 0 0 0 0 212s [2,] 0 1 0 0 212s [3,] 0 0 1 0 212s [4,] 0 0 0 1 212s [5,] 0 1 0 0 212s [6,] 0 0 0 0 212s [7,] 0 0 0 0 212s > ctabs(x, y, weights = w, subset = s) 212s [,1] [,2] [,3] [,4] 212s [1,] 0 0 0 0 212s [2,] 0 2 0 0 212s [3,] 0 0 2 0 212s [4,] 0 0 0 2 212s [5,] 0 2 0 0 212s [6,] 0 0 0 0 212s [7,] 0 0 0 0 212s > ctabs(x, y, block = b) 212s , , 1 212s 212s [,1] [,2] [,3] [,4] 212s [1,] 0 0 0 0 212s [2,] 0 1 0 0 212s [3,] 0 0 1 0 212s [4,] 0 0 0 1 212s [5,] 0 0 0 0 212s [6,] 0 0 0 0 212s [7,] 0 0 0 0 212s 212s , , 2 212s 212s [,1] [,2] [,3] [,4] 212s [1,] 0 0 0 0 212s [2,] 0 0 0 0 212s [3,] 0 0 0 0 212s [4,] 0 0 0 0 212s [5,] 0 1 0 0 212s [6,] 0 0 1 0 212s [7,] 0 0 0 1 212s 212s > ctabs(x, y, weights = w, block = b) 212s , , 1 212s 212s [,1] [,2] [,3] [,4] 212s [1,] 0 0 0 0 212s [2,] 0 2 0 0 212s [3,] 0 0 2 0 212s [4,] 0 0 0 2 212s [5,] 0 0 0 0 212s [6,] 0 0 0 0 212s [7,] 0 0 0 0 212s 212s , , 2 212s 212s [,1] [,2] [,3] [,4] 212s [1,] 0 0 0 0 212s [2,] 0 0 0 0 212s [3,] 0 0 0 0 212s [4,] 0 0 0 0 212s [5,] 0 2 0 0 212s [6,] 0 0 2 0 212s [7,] 0 0 0 2 212s 212s > ctabs(x, y, subset = s, block = b) 212s , , 1 212s 212s [,1] [,2] [,3] [,4] 212s [1,] 0 0 0 0 212s [2,] 0 1 0 0 212s [3,] 0 0 1 0 212s [4,] 0 0 0 1 212s [5,] 0 0 0 0 212s [6,] 0 0 0 0 212s [7,] 0 0 0 0 212s 212s , , 2 212s 212s [,1] [,2] [,3] [,4] 212s [1,] 0 0 0 0 212s [2,] 0 0 0 0 212s [3,] 0 0 0 0 212s [4,] 0 0 0 0 212s [5,] 0 1 0 0 212s [6,] 0 0 0 0 212s [7,] 0 0 0 0 212s 212s > ctabs(x, y, weights = w, subset = s, block = b) 212s , , 1 212s 212s [,1] [,2] [,3] [,4] 212s [1,] 0 0 0 0 212s [2,] 0 2 0 0 212s [3,] 0 0 2 0 212s [4,] 0 0 0 2 212s [5,] 0 0 0 0 212s [6,] 0 0 0 0 212s [7,] 0 0 0 0 212s 212s , , 2 212s 212s [,1] [,2] [,3] [,4] 212s [1,] 0 0 0 0 212s [2,] 0 0 0 0 212s [3,] 0 0 0 0 212s [4,] 0 0 0 0 212s [5,] 0 2 0 0 212s [6,] 0 0 0 0 212s [7,] 0 0 0 0 212s 212s > 212s > w <- round(1:length(x) / length(x), 2) 212s > ctabs(x, weights = w) 212s [1] 0.00 0.17 0.33 0.50 0.67 0.83 1.00 212s > ctabs(x, weights = w, subset = s) 212s [1] 0.00 0.17 0.33 0.50 0.67 0.00 0.00 212s > ctabs(x, weights = w, block = b) 212s [,1] [,2] 212s [1,] 0.00 0.00 212s [2,] 0.17 0.00 212s [3,] 0.33 0.00 212s [4,] 0.50 0.00 212s [5,] 0.00 0.67 212s [6,] 0.00 0.83 212s [7,] 0.00 1.00 212s > ctabs(x, weights = w, subset = s, block = b) 212s [,1] [,2] 212s [1,] 0.00 0.00 212s [2,] 0.17 0.00 212s [3,] 0.33 0.00 212s [4,] 0.50 0.00 212s [5,] 0.00 0.67 212s [6,] 0.00 0.00 212s [7,] 0.00 0.00 212s > 212s > ctabs(x, y, weights = w) 212s [,1] [,2] [,3] [,4] 212s [1,] 0 0.00 0.00 0.0 212s [2,] 0 0.17 0.00 0.0 212s [3,] 0 0.00 0.33 0.0 212s [4,] 0 0.00 0.00 0.5 212s [5,] 0 0.67 0.00 0.0 212s [6,] 0 0.00 0.83 0.0 212s [7,] 0 0.00 0.00 1.0 212s > ctabs(x, y, weights = w, subset = s) 212s [,1] [,2] [,3] [,4] 212s [1,] 0 0.00 0.00 0.0 212s [2,] 0 0.17 0.00 0.0 212s [3,] 0 0.00 0.33 0.0 212s [4,] 0 0.00 0.00 0.5 212s [5,] 0 0.67 0.00 0.0 212s [6,] 0 0.00 0.00 0.0 212s [7,] 0 0.00 0.00 0.0 212s > ctabs(x, y, weights = w, block = b) 212s , , 1 212s 212s [,1] [,2] [,3] [,4] 212s [1,] 0 0.00 0.00 0.0 212s [2,] 0 0.17 0.00 0.0 212s [3,] 0 0.00 0.33 0.0 212s [4,] 0 0.00 0.00 0.5 212s [5,] 0 0.00 0.00 0.0 212s [6,] 0 0.00 0.00 0.0 212s [7,] 0 0.00 0.00 0.0 212s 212s , , 2 212s 212s [,1] [,2] [,3] [,4] 212s [1,] 0 0.00 0.00 0 212s [2,] 0 0.00 0.00 0 212s [3,] 0 0.00 0.00 0 212s [4,] 0 0.00 0.00 0 212s [5,] 0 0.67 0.00 0 212s [6,] 0 0.00 0.83 0 212s [7,] 0 0.00 0.00 1 212s 212s > ctabs(x, y, weights = w, subset = s, block = b) 212s , , 1 212s 212s [,1] [,2] [,3] [,4] 212s [1,] 0 0.00 0.00 0.0 212s [2,] 0 0.17 0.00 0.0 212s [3,] 0 0.00 0.33 0.0 212s [4,] 0 0.00 0.00 0.5 212s [5,] 0 0.00 0.00 0.0 212s [6,] 0 0.00 0.00 0.0 212s [7,] 0 0.00 0.00 0.0 212s 212s , , 2 212s 212s [,1] [,2] [,3] [,4] 212s [1,] 0 0.00 0 0 212s [2,] 0 0.00 0 0 212s [3,] 0 0.00 0 0 212s [4,] 0 0.00 0 0 212s [5,] 0 0.67 0 0 212s [6,] 0 0.00 0 0 212s [7,] 0 0.00 0 0 212s 212s > 212s BEGIN TEST regtest_libcoin.R 212s 212s R version 4.4.3 (2025-02-28) -- "Trophy Case" 212s Copyright (C) 2025 The R Foundation for Statistical Computing 212s Platform: x86_64-pc-linux-gnu 212s 212s R is free software and comes with ABSOLUTELY NO WARRANTY. 212s You are welcome to redistribute it under certain conditions. 212s Type 'license()' or 'licence()' for distribution details. 212s 212s R is a collaborative project with many contributors. 212s Type 'contributors()' for more information and 212s 'citation()' on how to cite R or R packages in publications. 212s 212s Type 'demo()' for some demos, 'help()' for on-line help, or 212s 'help.start()' for an HTML browser interface to help. 212s Type 'q()' to quit R. 212s 212s > 212s > library("libcoin") 212s > library("coin") 212s Loading required package: survival 213s > set.seed(29) 213s > 213s > n <- 100 213s > p <- 4 213s > q <- 2 213s > X <- matrix(runif(p * n), nc = p) 213s > Y <- matrix(runif(q * n), nc = q) 213s > w <- as.integer(floor(runif(n, max = 4))) 213s > s <- sort(sample(1:n, floor(n/2), replace = TRUE)) 213s > b <- sample(gl(2, 2, length = n)) 213s > 213s > tol <- if (.Platform$OS.type == "unix") { 213s + sqrt(.Machine$double.eps) 213s + } else { 213s + .Machine$double.eps^(1/5) 213s + } 213s > 213s > cmp <- function(t1, t2) { 213s + if (is.null(t1$Covariance)) { 213s + var1 <- t1$Variance 213s + var2 <- diag(covariance(t2)) 213s + } else { 213s + var1 <- t1$Covariance 213s + var2 <- covariance(t2) 213s + var2 <- var2[!upper.tri(var2)] 213s + } 213s + stopifnot(all.equal( 213s + list(t1$LinearStatistic, 213s + t1$Expectation, 213s + var1), 213s + list(as.vector(statistic(t2, type = "linear")), 213s + as.vector(expectation(t2)), 213s + var2), 213s + check.attributes = FALSE, tolerance = tol 213s + )) 213s + } 213s > 213s > cmp2 <- function(t1, t2) { 213s + nm <- c("LinearStatistic", "Expectation", 213s + if(t1$varonly == 1) "Variance" else "Covariance") 213s + stopifnot(all.equal(t1[nm], t2[nm], tolerance = tol)) 213s + } 213s > 213s > cmp3 <- function(t1, t2, pvalue = FALSE) { 213s + stopifnot(all.equal(statistic(t1), t2$TestStatistic, tolerance = tol)) 213s + if (pvalue) 213s + stopifnot(all.equal(unclass(pvalue(t1)), t2$p.value, check.attributes = FALSE, tolerance = tol)) 213s + } 213s > 213s > cmp4 <- function(t1, t2) 213s + stopifnot(all.equal(t1$TestStatistic, sqrt(t2$TestStatistic), tolerance = tol)) 213s > 213s > 213s > t1 <- LinStatExpCov(X, Y) 213s > t1v <- LinStatExpCov(X, Y, varonly = TRUE) 213s > t2 <- independence_test(Y ~ X) 213s > cmp(t1, t2) 213s > cmp(t1v, t2) 213s > cmp3(t2, doTest(t1, teststat = "maximum"), pvalue = TRUE) 213s > t3 <- independence_test(Y ~ X, teststat = "maximum", alternative = "less") 213s > cmp3(t3, doTest(t1, teststat = "maximum", alternative = "less"), pvalue = TRUE) 213s > t3 <- independence_test(Y ~ X, teststat = "maximum", alternative = "greater") 213s > cmp3(t3, doTest(t1, teststat = "maximum", alternative = "greater"), pvalue = TRUE) 213s > t3 <- independence_test(Y ~ X, teststat = "quadratic") 213s > cmp3(t3, doTest(t1, teststat = "quadratic"), pvalue = TRUE) 213s > 213s > t1 <- LinStatExpCov(X, Y, weights = w) 213s > t1v <- LinStatExpCov(X, Y, weights = w, varonly = TRUE) 213s > t2 <- independence_test(Y ~ X, weights = ~ w) 213s > cmp(t1, t2) 213s > cmp(t1v, t2) 213s > 213s > t1 <- LinStatExpCov(X, Y, subset = s) 213s > t1v <- LinStatExpCov(X, Y, subset = s, varonly = TRUE) 213s > t2 <- independence_test(Y ~ X, subset = s) 213s > cmp(t1, t2) 213s > cmp(t1v, t2) 213s > 213s > t1 <- LinStatExpCov(X, Y, weights = w, subset = s) 213s > t1v <- LinStatExpCov(X, Y, weights = w, subset = s, varonly = TRUE) 213s > t2 <- independence_test(Y ~ X, weights = ~w, subset = s) 213s > cmp(t1, t2) 213s > cmp(t1v, t2) 213s > 213s > t1 <- LinStatExpCov(X, Y, block = b) 213s > t1v <- LinStatExpCov(X, Y, block = b, varonly = TRUE) 213s > t2 <- independence_test(Y ~ X | b) 213s > cmp(t1, t2) 213s > cmp(t1v, t2) 213s > 213s > t1 <- LinStatExpCov(X, Y, weights = w, block = b) 213s > t1v <- LinStatExpCov(X, Y, weights = w, block = b, varonly = TRUE) 213s > t2 <- independence_test(Y ~ X | b, weights = ~ w) 213s > cmp(t1, t2) 213s > cmp(t1v, t2) 213s > 213s > t1 <- LinStatExpCov(X, Y, subset = s, block = b) 213s > t1v <- LinStatExpCov(X, Y, subset = s, block = b, varonly = TRUE) 213s > t2 <- independence_test(Y ~ X | b, subset = s) 213s > cmp(t1, t2) 213s > cmp(t1v, t2) 213s > 213s > t1 <- LinStatExpCov(X, Y, weights = w, subset = s, block = b) 213s > t1v <- LinStatExpCov(X, Y, weights = w, subset = s, block = b, varonly = TRUE) 213s > t2 <- independence_test(Y ~ X | b, weights = ~w, subset = s) 213s > cmp(t1, t2) 213s > cmp(t1v, t2) 213s > 213s > n <- 100 213s > n1 <- 5 213s > n2 <- 4 213s > p <- 4 213s > q <- 2 213s > X <- rbind(0, matrix(runif(p * n1), nc = p)) 213s > Y <- rbind(0, matrix(runif(q * n2), nc = q)) 213s > ix <- sample(1:n1, n, replace = TRUE) 213s > iy <- sample(1:n2, n, replace = TRUE) 213s > w <- as.integer(floor(runif(n, max = 4))) 213s > s <- sort(sample(1:n, floor(n/2), replace = TRUE)) 213s > b <- sample(gl(2, 2, length = n)) 213s > 213s > t1 <- LinStatExpCov(X, Y, ix, iy) 213s > t1v <- LinStatExpCov(X, Y, ix, iy, varonly = TRUE) 213s > t2 <- independence_test(Y[iy + 1,] ~ X[ix + 1,]) 213s > cmp(t1, t2) 213s > cmp(t1v, t2) 213s > 213s > t1 <- LinStatExpCov(X, Y, ix, iy, weights = w) 213s > t1v <- LinStatExpCov(X, Y, ix, iy, weights = w, varonly = TRUE) 213s > t2 <- independence_test(Y[iy + 1,] ~ X[ix + 1,], weights = ~ w) 213s > cmp(t1, t2) 213s > cmp(t1v, t2) 213s > 213s > t1 <- LinStatExpCov(X, Y, ix, iy, subset = s) 213s > t1v <- LinStatExpCov(X, Y, ix, iy, subset = s, varonly = TRUE) 213s > t2 <- independence_test(Y[iy + 1,] ~ X[ix + 1,], subset = s) 213s > cmp(t1, t2) 213s > cmp(t1v, t2) 213s > 213s > t1 <- LinStatExpCov(X, Y, ix, iy, weights = w, subset = s) 213s > t1v <- LinStatExpCov(X, Y, ix, iy, weights = w, subset = s, varonly = TRUE) 213s > t2 <- independence_test(Y[iy + 1,] ~ X[ix + 1,], weights = ~w, subset = s) 213s > cmp(t1, t2) 213s > cmp(t1v, t2) 213s > 213s > t1 <- LinStatExpCov(X, Y, ix, iy, block = b) 213s > t1v <- LinStatExpCov(X, Y, ix, iy, block = b, varonly = TRUE) 213s > t2 <- independence_test(Y[iy + 1,] ~ X[ix + 1,] | b) 213s > cmp(t1, t2) 213s > cmp(t1v, t2) 213s > 213s > t1 <- LinStatExpCov(X, Y, ix, iy, weights = w, block = b) 213s > t1v <- LinStatExpCov(X, Y, ix, iy, weights = w, block = b, varonly = TRUE) 213s > t2 <- independence_test(Y[iy + 1,] ~ X[ix + 1,] | b, weights = ~ w) 213s > cmp(t1, t2) 213s > cmp(t1v, t2) 213s > 213s > t1 <- LinStatExpCov(X, Y, ix, iy, subset = s, block = b) 213s > t1v <- LinStatExpCov(X, Y, ix, iy, subset = s, block = b, varonly = TRUE) 213s > t2 <- independence_test(Y[iy + 1,] ~ X[ix + 1,] | b, subset = s) 213s > cmp(t1, t2) 213s > cmp(t1v, t2) 213s > 213s > t1 <- LinStatExpCov(X, Y, ix, iy, weights = w, subset = s, block = b) 213s > t1v <- LinStatExpCov(X, Y, ix, iy, weights = w, subset = s, block = b, varonly = TRUE) 213s > t2 <- independence_test(Y[iy + 1,] ~ X[ix + 1,]| b, weights = ~w, subset = s) 213s > cmp(t1, t2) 213s > cmp(t1v, t2) 213s > 213s > #### X factor 213s > n <- 10000 213s > p <- 40 213s > q <- 20 213s > X <- diag(p)[fx <- unclass(factor(sample(1:p, n, replace = TRUE))),] 213s > Y <- matrix(runif(q * n), nc = q) 213s > w <- as.integer(floor(runif(n, max = 4))) 213s > s <- sort(sample(1:n, floor(n/2), replace = TRUE)) 213s > b <- sample(gl(2, 2, length = n)) 213s > 213s > t1 <- LinStatExpCov(X, Y) 213s > t1v <- LinStatExpCov(X, Y, varonly = TRUE) 213s > t2 <- independence_test(Y ~ X) 213s > cmp(t1, t2) 214s > cmp(t1v, t2) 214s > t1f <- LinStatExpCov(fx, Y) 214s > t1vf <- LinStatExpCov(fx, Y, varonly = TRUE) 214s > cmp2(t1, t1f) 214s > cmp2(t1v, t1vf) 214s > 214s > t1 <- LinStatExpCov(X, Y, weights = w) 214s > t1v <- LinStatExpCov(X, Y, weights = w, varonly = TRUE) 214s > t2 <- independence_test(Y ~ X, weights = ~ w) 214s > cmp(t1, t2) 214s > cmp(t1v, t2) 214s > t1f <- LinStatExpCov(fx, Y, weights = w) 214s > t1vf <- LinStatExpCov(fx, Y, weights = w, varonly = TRUE) 214s > cmp2(t1, t1f) 214s > cmp2(t1v, t1vf) 214s > 214s > t1 <- LinStatExpCov(X, Y, subset = s) 214s > t1v <- LinStatExpCov(X, Y, subset = s, varonly = TRUE) 214s > t2 <- independence_test(Y ~ X, subset = s) 214s > cmp(t1, t2) 214s > cmp(t1v, t2) 214s > t1f <- LinStatExpCov(fx, Y, subset = s) 214s > t1vf <- LinStatExpCov(fx, Y, subset = s, varonly = TRUE) 214s > cmp2(t1, t1f) 214s > cmp2(t1v, t1vf) 214s > 214s > t1 <- LinStatExpCov(X, Y, weights = w, subset = s) 214s > t1v <- LinStatExpCov(X, Y, weights = w, subset = s, varonly = TRUE) 214s > t2 <- independence_test(Y ~ X, weights = ~w, subset = s) 214s > cmp(t1, t2) 214s > cmp(t1v, t2) 214s > t1f <- LinStatExpCov(fx, Y, weights = w, subset = s) 214s > t1vf <- LinStatExpCov(fx, Y, weights = w, subset = s, varonly = TRUE) 214s > cmp2(t1, t1f) 214s > cmp2(t1v, t1vf) 214s > 214s > t1 <- LinStatExpCov(X, Y, block = b) 214s > t1v <- LinStatExpCov(X, Y, block = b, varonly = TRUE) 215s > t2 <- independence_test(Y ~ X | b) 215s > cmp(t1, t2) 215s > cmp(t1v, t2) 215s > t1f <- LinStatExpCov(fx, Y, block = b) 215s > t1vf <- LinStatExpCov(fx, Y, block = b, varonly = TRUE) 215s > cmp2(t1, t1f) 215s > cmp2(t1v, t1vf) 215s > 215s > 215s > t1 <- LinStatExpCov(X, Y, weights = w, block = b) 215s > t1v <- LinStatExpCov(X, Y, weights = w, block = b, varonly = TRUE) 215s > t2 <- independence_test(Y ~ X | b, weights = ~ w) 215s > cmp(t1, t2) 215s > cmp(t1v, t2) 215s > t1f <- LinStatExpCov(fx, Y, weights = w, block = b) 215s > t1vf <- LinStatExpCov(fx, Y, weights = w, block = b, varonly = TRUE) 215s > cmp2(t1, t1f) 215s > cmp2(t1v, t1vf) 215s > 215s > t1 <- LinStatExpCov(X, Y, subset = s, block = b) 215s > t1v <- LinStatExpCov(X, Y, subset = s, block = b, varonly = TRUE) 215s > t2 <- independence_test(Y ~ X | b, subset = s) 215s > cmp(t1, t2) 215s > cmp(t1v, t2) 215s > t1f <- LinStatExpCov(fx, Y, subset = s, block = b) 215s > t1vf <- LinStatExpCov(fx, Y, subset = s, block = b, varonly = TRUE) 215s > cmp2(t1, t1f) 215s > cmp2(t1v, t1vf) 215s > 215s > t1 <- LinStatExpCov(X, Y, weights = w, subset = s, block = b) 215s > t1v <- LinStatExpCov(X, Y, weights = w, subset = s, block = b, varonly = TRUE) 215s > t2 <- independence_test(Y ~ X | b, weights = ~w, subset = s) 215s > cmp(t1, t2) 215s > cmp(t1v, t2) 215s > t1f <- LinStatExpCov(fx, Y, weights = w, subset = s, block = b) 215s > t1vf <- LinStatExpCov(fx, Y, weights = w, subset = s, block = b, varonly = TRUE) 215s > cmp2(t1, t1f) 215s > cmp2(t1v, t1vf) 215s > 215s > n1 <- 5 215s > n2 <- 7 215s > X <- rbind(0, diag(n1)) 215s > Y <- rbind(0, matrix(runif(q * n2), nc = q)) 215s > ix <- sample(1:n1, n, replace = TRUE) 215s > iy <- sample(1:n2, n, replace = TRUE) 215s > w <- as.integer(floor(runif(n, max = 4))) 215s > s <- sort(sample(1:n, floor(n/2), replace = TRUE)) 215s > b <- sample(gl(2, 2, length = n)) 215s > 215s > YY <- Y[iy + 1,] 215s > XX <- X[ix + 1,] 215s > 215s > t1 <- LinStatExpCov(X, Y, ix, iy) 215s > t1v <- LinStatExpCov(X, Y, ix, iy, varonly = TRUE) 215s > t2 <- independence_test(YY ~ XX) 215s > cmp(t1, t2) 215s > cmp(t1v, t2) 215s > t1f <- LinStatExpCov(numeric(0), Y, ix, iy) 215s > t1vf <- LinStatExpCov(numeric(0), Y, ix, iy, varonly = TRUE) 215s > cmp2(t1, t1f) 215s > cmp2(t1v, t1vf) 215s > 215s > t1 <- LinStatExpCov(X, Y, ix, iy, weights = w) 215s > t1v <- LinStatExpCov(X, Y, ix, iy, weights = w, varonly = TRUE) 215s > t2 <- independence_test(YY ~ XX, weights = ~ w) 215s > cmp(t1, t2) 215s > cmp(t1v, t2) 215s > t1f <- LinStatExpCov(numeric(0), Y, ix, iy, weights = w) 215s > t1vf <- LinStatExpCov(numeric(0), Y, ix, iy, weights = w, varonly = TRUE) 215s > cmp2(t1, t1f) 215s > cmp2(t1v, t1vf) 215s > 215s > t1 <- LinStatExpCov(X, Y, ix, iy, subset = s) 215s > t1v <- LinStatExpCov(X, Y, ix, iy, subset = s, varonly = TRUE) 215s > t2 <- independence_test(YY ~ XX, subset = s) 215s > cmp(t1, t2) 215s > cmp(t1v, t2) 215s > t1f <- LinStatExpCov(numeric(0), Y, ix, iy, subset = s) 216s > t1vf <- LinStatExpCov(numeric(0), Y, ix, iy, subset = s, varonly = TRUE) 216s > cmp2(t1, t1f) 216s > cmp2(t1v, t1vf) 216s > 216s > 216s > t1 <- LinStatExpCov(X, Y, ix, iy, weights = w, subset = s) 216s > t1v <- LinStatExpCov(X, Y, ix, iy, weights = w, subset = s, varonly = TRUE) 216s > t2 <- independence_test(YY ~ XX, weights = ~w, subset = s) 216s > cmp(t1, t2) 216s > cmp(t1v, t2) 216s > t1f <- LinStatExpCov(numeric(0), Y, ix, iy, weights = w, subset = s) 216s > t1vf <- LinStatExpCov(numeric(0), Y, ix, iy, weights = w, subset = s, varonly = TRUE) 216s > cmp2(t1, t1f) 216s > cmp2(t1v, t1vf) 216s > 216s > t1 <- LinStatExpCov(X, Y, ix, iy, block = b) 216s > t1v <- LinStatExpCov(X, Y, ix, iy, block = b, varonly = TRUE) 216s > t2 <- independence_test(YY ~ XX | b) 216s > cmp(t1, t2) 216s > cmp(t1v, t2) 216s > t1f <- LinStatExpCov(numeric(0), Y, ix, iy, block = b) 216s > t1vf <- LinStatExpCov(numeric(0), Y, ix, iy, block = b, varonly = TRUE) 216s > cmp2(t1, t1f) 216s > cmp2(t1v, t1vf) 216s > 216s > t1 <- LinStatExpCov(X, Y, ix, iy, weights = w, block = b) 216s > t1v <- LinStatExpCov(X, Y, ix, iy, weights = w, block = b, varonly = TRUE) 216s > t2 <- independence_test(YY ~ XX | b, weights = ~ w) 216s > cmp(t1, t2) 216s > cmp(t1v, t2) 216s > t1f <- LinStatExpCov(numeric(0), Y, ix, iy, weights = w, block = b) 216s > t1vf <- LinStatExpCov(numeric(0), Y, ix, iy, weights = w, block = b, varonly = TRUE) 216s > cmp2(t1, t1f) 216s > cmp2(t1v, t1vf) 216s > 216s > t1 <- LinStatExpCov(X, Y, ix, iy, subset = s, block = b) 216s > t1v <- LinStatExpCov(X, Y, ix, iy, subset = s, block = b, varonly = TRUE) 216s > t2 <- independence_test(YY ~ XX | b, subset = s) 216s > cmp(t1, t2) 216s > cmp(t1v, t2) 216s > t1f <- LinStatExpCov(numeric(0), Y, ix, iy, subset = s, block = b) 216s > t1vf <- LinStatExpCov(numeric(0), Y, ix, iy, subset = s, block = b, varonly = TRUE) 216s > cmp2(t1, t1f) 216s > cmp2(t1v, t1vf) 216s > 216s > t1 <- LinStatExpCov(X, Y, ix, iy, weights = w, subset = s, block = b) 216s > t1v <- LinStatExpCov(X, Y, ix, iy, weights = w, subset = s, block = b, varonly = TRUE) 216s > t2 <- independence_test(YY ~ XX| b, weights = ~w, subset = s) 216s > cmp(t1, t2) 216s > cmp(t1v, t2) 216s > t1f <- LinStatExpCov(numeric(0), Y, ix, iy, weights = w, subset = s, block = b) 216s > t1vf <- LinStatExpCov(numeric(0), Y, ix, iy, weights = w, subset = s, block = b, varonly = TRUE) 216s > cmp2(t1, t1f) 216s > cmp2(t1v, t1vf) 216s > 216s > ### and now maximally selected statistics 216s > n <- 100 216s > B <- 1000 216s > x <- round(runif(n), 2) 216s > y <- rnorm(n, mean = x < .5, sd = 2.6) 216s > y2 <- runif(n) 216s > blk <- gl(4, n/4) 216s > ux <- sort(unique(x)) 216s > ix <- unclass(cut(x, breaks = c(-Inf, ux[-length(ux)] + diff(ux) / 2, Inf))) 216s > 216s > cmp3 <- function(t1, t2) 216s + stopifnot(all.equal(statistic(t1), t2$TestStatistic, tolerance = tol)) 216s > 216s > cmp4 <- function(t1, t2) 216s + stopifnot(all.equal(t1$TestStatistic, sqrt(t2$TestStatistic), tolerance = tol)) 216s > 216s > (mt <- maxstat_test(y ~ x , distrib = approximate(nresample = 1000))) 216s 216s Approximative Generalized Maximally Selected Statistics 216s 216s data: y by x 216s maxT = 2.1537, p-value = 0.26 216s alternative hypothesis: two.sided 216s sample estimates: 216s "best" cutpoint: <= 0.53 216s 216s > lev <- LinStatExpCov(ix, y, nresample = 1000) 216s > (tst <- doTest(lev, teststat = "maximum")) 216s $TestStatistic 216s [1] 2.153664 216s 216s $p.value 216s [1] 0.245 216s 216s $index 216s [1] 36 216s 216s > cmp3(mt, tst) 216s > ux[tst$index] 216s [1] 0.53 216s > (tst2 <- doTest(lev, teststat = "quadratic")) 216s $TestStatistic 216s [1] 4.63827 216s 216s $p.value 216s [1] 0.245 216s 216s $index 216s [1] 36 216s 216s > cmp4(tst, tst2) 216s > ux[tst2$index] 216s [1] 0.53 216s > lev <- LinStatExpCov(ix, y, nresample = 1000, varonly = TRUE) 216s > (tst <- doTest(lev, teststat = "maximum")) 216s $TestStatistic 216s [1] 2.153664 216s 216s $p.value 216s [1] 0.253 216s 216s $index 216s [1] 36 216s 216s > cmp3(mt, tst) 216s > ux[tst$index] 216s [1] 0.53 216s > (tst2 <- doTest(lev, teststat = "quadratic")) 216s $TestStatistic 216s [1] 4.63827 216s 216s $p.value 216s [1] 0.253 216s 216s $index 216s [1] 36 216s 216s > cmp4(tst, tst2) 216s > ux[tst2$index] 216s [1] 0.53 216s > 216s > (mt <- maxstat_test(y ~ x | blk, distrib = approximate(nresample = 1000))) 216s 216s Approximative Generalized Maximally Selected Statistics 216s 216s data: y by x 216s stratified by blk 216s maxT = 2.2764, p-value = 0.221 216s alternative hypothesis: two.sided 216s sample estimates: 216s "best" cutpoint: <= 0.53 216s 216s > lev <- LinStatExpCov(ix, y, block = blk, nresample = 1000) 216s > (tst <- doTest(lev, teststat = "maximum")) 216s $TestStatistic 216s [1] 2.276446 216s 216s $p.value 216s [1] 0.192 216s 216s $index 216s [1] 36 216s 216s > cmp3(mt, tst) 216s > ux[tst$index] 216s [1] 0.53 216s > (tst2 <- doTest(lev, teststat = "quadratic")) 216s $TestStatistic 216s [1] 5.182204 216s 216s $p.value 216s [1] 0.192 216s 216s $index 216s [1] 36 216s 216s > cmp4(tst, tst2) 216s > ux[tst$index] 216s [1] 0.53 216s > lev <- LinStatExpCov(ix, y, block = blk, nresample = 1000, varonly = TRUE) 216s > try(tst <- doTest(lev, teststat = "maximum")) 216s > 216s > (mt <- maxstat_test(y + y2 ~ x , distrib = approximate(nresample = 1000))) 216s Error in doTest(lev, teststat = "maximum") : 216s need covariance for maximally statistics with blocks 216s 216s Approximative Generalized Maximally Selected Statistics 216s 216s data: y, y2 by x 216s maxT = 2.1537, p-value = 0.445 216s alternative hypothesis: two.sided 216s sample estimates: 216s "best" cutpoint: <= 0.53 216s 216s > lev <- LinStatExpCov(ix, cbind(y, y2), nresample = 1000) 216s > (tst <- doTest(lev, teststat = "maximum")) 216s $TestStatistic 216s [1] 2.153664 216s 216s $p.value 216s [1] 0.471 216s 216s $index 216s [1] 36 216s 216s > cmp3(mt, tst) 216s > ux[tst$index] 216s [1] 0.53 216s > (tst <- doTest(lev, teststat = "quadratic")) 216s $TestStatistic 216s [1] 5.720153 216s 216s $p.value 216s [1] 0.412 216s 216s $index 216s [1] 40 216s 216s > ux[tst$index] 216s [1] 0.57 216s > lev <- LinStatExpCov(ix, cbind(y, y2), nresample = 1000, varonly = TRUE) 216s > (tst <- doTest(lev, teststat = "maximum")) 216s $TestStatistic 216s [1] 2.153664 216s 216s $p.value 216s [1] 0.476 216s 216s $index 216s [1] 36 216s 216s > cmp3(mt, tst) 216s > ux[tst$index] 216s [1] 0.53 216s > (tst <- doTest(lev, teststat = "quadratic")) 216s $TestStatistic 216s [1] 5.720153 216s 216s $p.value 216s [1] 0.429 216s 216s $index 216s [1] 40 216s 216s > ux[tst$index] 216s [1] 0.57 216s > 216s > (mt <- maxstat_test(y + y2 ~ x | blk, distrib = approximate(nresample = 1000))) 216s 216s Approximative Generalized Maximally Selected Statistics 216s 216s data: y, y2 by x 216s stratified by blk 216s maxT = 2.2764, p-value = 0.38 216s alternative hypothesis: two.sided 216s sample estimates: 216s "best" cutpoint: <= 0.53 216s 216s > lev <- LinStatExpCov(ix, cbind(y, y2), block = blk, nresample = 1000) 216s > (tst <- doTest(lev, teststat = "maximum")) 216s $TestStatistic 216s [1] 2.276446 216s 216s $p.value 216s [1] 0.394 216s 216s $index 216s [1] 36 216s 216s > cmp3(mt, tst) 216s > ux[tst$index] 216s [1] 0.53 216s > (tst <- doTest(lev, teststat = "quadratic")) 216s $TestStatistic 216s [1] 5.406605 216s 216s $p.value 216s [1] 0.504 216s 216s $index 216s [1] 40 216s 216s > ux[tst$index] 216s [1] 0.57 216s > lev <- LinStatExpCov(ix, cbind(y, y2), block = blk, nresample = 1000, varonly = TRUE) 216s Error in doTest(lev, teststat = "maximum") : 216s need covariance for maximally statistics with blocks 216s > try(tst <- doTest(lev, teststat = "maximum")) 216s > 216s > x <- sample(gl(5, n)) 216s > y <- rnorm(length(x), mean = x %in% levels(x)[c(1, 3, 5)], sd = 4.5) 216s > y2 <- runif(length(x)) 216s > ix <- unclass(x) 216s > blk <- gl(5, n) 216s > 216s > (mt <- maxstat_test(y ~ x , distrib = approximate(nresample = 1000))) 216s 216s Approximative Generalized Maximally Selected Statistics 216s 216s data: y by x (1, 2, 3, 4, 5) 216s maxT = 1.7088, p-value = 0.443 216s alternative hypothesis: two.sided 216s sample estimates: 216s "best" cutpoint: {1, 3} vs. {2, 4, 5} 216s 216s > lev <- LinStatExpCov(ix, y, nresample = 1000) 216s > (tst <- doTest(lev, teststat = "maximum", ordered = FALSE)) 216s $TestStatistic 216s [1] 1.708775 216s 216s $p.value 216s [1] 0.485 216s 216s $index 216s [1] 0 1 0 1 1 216s 216s > cmp3(mt, tst) 216s > (tst2 <- doTest(lev, teststat = "quadratic", ordered = FALSE)) 216s $TestStatistic 216s [1] 2.919912 216s 216s $p.value 216s [1] 0.485 216s 216s $index 216s [1] 0 1 0 1 1 216s 216s > cmp4(tst, tst2) 216s > lev <- LinStatExpCov(ix, y, nresample = 1000, varonly = TRUE) 216s > (tst <- doTest(lev, teststat = "maximum", ordered = FALSE)) 216s $TestStatistic 216s [1] 1.708775 216s 216s $p.value 216s [1] 0.476 216s 216s $index 216s [1] 0 1 0 1 1 216s 216s > cmp3(mt, tst) 216s > (tst2 <- doTest(lev, teststat = "quadratic", ordered = FALSE)) 216s $TestStatistic 216s [1] 2.919912 216s 216s $p.value 216s [1] 0.476 216s 216s $index 216s [1] 0 1 0 1 1 216s 216s > cmp4(tst, tst2) 216s > 216s > (mt <- maxstat_test(y ~ x | blk, distrib = approximate(nresample = 1000))) 216s 216s Approximative Generalized Maximally Selected Statistics 216s 216s data: y by x (1, 2, 3, 4, 5) 216s stratified by blk 216s maxT = 1.6489, p-value = 0.543 216s alternative hypothesis: two.sided 216s sample estimates: 216s "best" cutpoint: {1, 3} vs. {2, 4, 5} 216s 216s > lev <- LinStatExpCov(ix, y, block = blk, nresample = 1000) 216s > (tst <- doTest(lev, teststat = "maximum", ordered = FALSE)) 216s $TestStatistic 216s [1] 1.648947 216s 216s $p.value 216s [1] 0.464 216s 216s $index 216s [1] 0 1 0 1 1 216s 216s > cmp3(mt, tst) 216s > (tst2 <- doTest(lev, teststat = "quadratic", ordered = FALSE)) 216s $TestStatistic 216s [1] 2.719028 216s 216s $p.value 216s [1] 0.464 216s 216s $index 216s [1] 0 1 0 1 1 216s 216s > cmp4(tst, tst2) 216s > lev <- LinStatExpCov(ix, y, block = blk, nresample = 1000, varonly = TRUE) 216s Error in doTest(lev, teststat = "maximum", ordered = FALSE) : 216s need covariance for maximally statistics with blocks 216s > try(tst <- doTest(lev, teststat = "maximum", ordered = FALSE)) 216s > 216s > (mt <- maxstat_test(y + y2 ~ x , distrib = approximate(nresample = 1000))) 216s 216s Approximative Generalized Maximally Selected Statistics 216s 216s data: y, y2 by x (1, 2, 3, 4, 5) 216s maxT = 2.358, p-value = 0.285 216s alternative hypothesis: two.sided 216s sample estimates: 216s "best" cutpoint: {1, 3, 5} vs. {2, 4} 216s 216s > lev <- LinStatExpCov(ix, cbind(y, y2), nresample = 1000) 216s > (tst <- doTest(lev, teststat = "maximum", ordered = FALSE)) 216s $TestStatistic 216s [1] 2.357973 216s 216s $p.value 216s [1] 0.301 216s 216s $index 216s [1] 0 1 0 1 0 216s 216s > cmp3(mt, tst) 216s > (tst <- doTest(lev, teststat = "quadratic", ordered = FALSE)) 216s $TestStatistic 216s [1] 8.373114 216s 216s $p.value 216s [1] 0.143 216s 216s $index 216s [1] 0 1 0 1 1 216s 216s > lev <- LinStatExpCov(ix, cbind(y, y2), nresample = 1000, varonly = TRUE) 216s > (tst <- doTest(lev, teststat = "maximum", ordered = FALSE)) 216s $TestStatistic 216s [1] 2.357973 216s 216s $p.value 216s [1] 0.275 216s 216s $index 216s [1] 0 1 0 1 0 216s 216s > cmp3(mt, tst) 216s > (tst <- doTest(lev, teststat = "quadratic", ordered = FALSE)) 216s $TestStatistic 216s [1] 8.373114 216s 216s $p.value 216s [1] 0.134 216s 216s $index 216s [1] 0 1 0 1 1 216s 216s > 216s > (mt <- maxstat_test(y + y2 ~ x | blk, distrib = approximate(nresample = 1000))) 216s 216s Approximative Generalized Maximally Selected Statistics 216s 216s data: y, y2 by x (1, 2, 3, 4, 5) 216s stratified by blk 216s maxT = 2.4473, p-value = 0.218 216s alternative hypothesis: two.sided 216s sample estimates: 216s "best" cutpoint: {1, 3, 5} vs. {2, 4} 216s 216s > lev <- LinStatExpCov(ix, cbind(y, y2), block = blk, nresample = 50) 216s > (tst <- doTest(lev, teststat = "maximum", ordered = FALSE)) 216s $TestStatistic 216s [1] 2.447272 216s 216s $p.value 216s [1] 0.2 216s 216s $index 216s [1] 0 1 0 1 0 216s 216s > cmp3(mt, tst) 216s > (tst2 <- doTest(lev, teststat = "quadratic", ordered = FALSE)) 216s $TestStatistic 216s [1] 8.115438 216s 216s $p.value 216s [1] 0.12 216s 216s $index 216s [1] 0 1 0 1 0 216s 216s > 216s > xx <- factor(x %in% levels(x)[tst2$index == 1]) 216s > (it <- independence_test(y + y2 ~ xx | blk, teststat = "quadratic")) 216s 216s Asymptotic General Independence Test 216s 216s data: y, y2 by xx (FALSE, TRUE) 216s stratified by blk 216s chi-squared = 8.1154, df = 2, p-value = 0.01729 216s 216s > cmp3(it, tst2) 216s > 216s > lev <- LinStatExpCov(ix, cbind(y, y2), block = blk, nresample = 1000, varonly = TRUE) 216s > try(tst <- doTest(lev, teststat = "maximum", ordered = FALSE)) 216s > 216s Error in doTest(lev, teststat = "maximum", ordered = FALSE) : 216s need covariance for maximally statistics with blocks 216s autopkgtest [22:18:03]: test run-unit-test: -----------------------] 217s autopkgtest [22:18:04]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 217s run-unit-test PASS 217s autopkgtest [22:18:04]: test pkg-r-autopkgtest: preparing testbed 218s Reading package lists... 218s Building dependency tree... 218s Reading state information... 218s Starting pkgProblemResolver with broken count: 0 218s Starting 2 pkgProblemResolver with broken count: 0 218s Done 218s The following NEW packages will be installed: 218s build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu 218s dctrl-tools g++ g++-14 g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc 218s gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-14 218s gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools libasan8 218s libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev 218s libgfortran-14-dev libhwasan0 libicu-dev libisl23 libitm1 libjpeg-dev 218s libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 liblzma-dev libmpc3 218s libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 218s libpkgconf3 libpng-dev libquadmath0 libreadline-dev libstdc++-14-dev 218s libtirpc-dev libtsan2 libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin 218s r-base-dev zlib1g-dev 219s 0 upgraded, 55 newly installed, 0 to remove and 0 not upgraded. 219s Need to get 103 MB of archives. 219s After this operation, 363 MB of additional disk space will be used. 219s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 219s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 219s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [11.9 MB] 219s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-17ubuntu3 [1030 B] 219s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [5586 B] 219s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.2.0-1ubuntu1 [22.4 kB] 219s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 15-20250222-0ubuntu1 [47.0 kB] 219s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 15-20250222-0ubuntu1 [28.6 kB] 219s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 15-20250222-0ubuntu1 [3055 kB] 219s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 15-20250222-0ubuntu1 [1355 kB] 219s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 15-20250222-0ubuntu1 [2756 kB] 220s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 15-20250222-0ubuntu1 [1205 kB] 220s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 15-20250222-0ubuntu1 [1677 kB] 220s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 15-20250222-0ubuntu1 [152 kB] 220s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-17ubuntu3 [2816 kB] 220s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [23.3 MB] 220s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-17ubuntu3 [536 kB] 220s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1208 B] 220s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.2.0-1ubuntu1 [5004 B] 220s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-17ubuntu3 [2486 kB] 220s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [13.4 MB] 221s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-17ubuntu3 [21.8 kB] 221s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [968 B] 221s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.2.0-1ubuntu1 [1100 B] 221s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 221s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 dctrl-tools amd64 2.24-3build3 [106 kB] 221s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran-14-dev amd64 14.2.0-17ubuntu3 [966 kB] 221s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [12.6 MB] 221s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14 amd64 14.2.0-17ubuntu3 [13.6 kB] 221s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1022 B] 221s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran amd64 4:14.2.0-1ubuntu1 [1174 B] 221s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 icu-devtools amd64 76.1-1ubuntu2 [237 kB] 221s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas-dev amd64 3.12.1-2 [338 kB] 221s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libbz2-dev amd64 1.0.8-6 [33.8 kB] 221s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate-dev amd64 1.23-1 [71.7 kB] 221s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libicu-dev amd64 76.1-1ubuntu2 [12.6 MB] 221s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8-dev amd64 2.1.5-3ubuntu2 [324 kB] 221s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 221s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 221s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack-dev amd64 3.12.1-2 [6489 kB] 221s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses-dev amd64 6.5+20250216-2 [424 kB] 221s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.45-1 [268 kB] 221s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-32-0 amd64 10.45-1 [251 kB] 221s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-posix3 amd64 10.45-1 [7204 B] 221s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-dev amd64 10.45-1 [908 kB] 222s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libpkgconf3 amd64 1.8.1-4 [32.3 kB] 222s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 222s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libpng-dev amd64 1.6.47-1 [298 kB] 222s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libreadline-dev amd64 8.2-6 [184 kB] 222s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma-dev amd64 5.6.4-1 [189 kB] 222s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf-bin amd64 1.8.1-4 [21.6 kB] 222s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf amd64 1.8.1-4 [16.8 kB] 222s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3 [193 kB] 222s Get:54 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-dev all 4.4.3-1 [4176 B] 222s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 222s Fetched 103 MB in 3s (31.4 MB/s) 222s Selecting previously unselected package libisl23:amd64. 222s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 88158 files and directories currently installed.) 222s Preparing to unpack .../00-libisl23_0.27-1_amd64.deb ... 222s Unpacking libisl23:amd64 (0.27-1) ... 222s Selecting previously unselected package libmpc3:amd64. 222s Preparing to unpack .../01-libmpc3_1.3.1-1build2_amd64.deb ... 222s Unpacking libmpc3:amd64 (1.3.1-1build2) ... 222s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 222s Preparing to unpack .../02-cpp-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 222s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 222s Selecting previously unselected package cpp-14. 222s Preparing to unpack .../03-cpp-14_14.2.0-17ubuntu3_amd64.deb ... 222s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 222s Selecting previously unselected package cpp-x86-64-linux-gnu. 222s Preparing to unpack .../04-cpp-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 222s Unpacking cpp-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 222s Selecting previously unselected package cpp. 222s Preparing to unpack .../05-cpp_4%3a14.2.0-1ubuntu1_amd64.deb ... 222s Unpacking cpp (4:14.2.0-1ubuntu1) ... 222s Selecting previously unselected package libcc1-0:amd64. 222s Preparing to unpack .../06-libcc1-0_15-20250222-0ubuntu1_amd64.deb ... 222s Unpacking libcc1-0:amd64 (15-20250222-0ubuntu1) ... 222s Selecting previously unselected package libitm1:amd64. 222s Preparing to unpack .../07-libitm1_15-20250222-0ubuntu1_amd64.deb ... 222s Unpacking libitm1:amd64 (15-20250222-0ubuntu1) ... 222s Selecting previously unselected package libasan8:amd64. 222s Preparing to unpack .../08-libasan8_15-20250222-0ubuntu1_amd64.deb ... 222s Unpacking libasan8:amd64 (15-20250222-0ubuntu1) ... 223s Selecting previously unselected package liblsan0:amd64. 223s Preparing to unpack .../09-liblsan0_15-20250222-0ubuntu1_amd64.deb ... 223s Unpacking liblsan0:amd64 (15-20250222-0ubuntu1) ... 223s Selecting previously unselected package libtsan2:amd64. 223s Preparing to unpack .../10-libtsan2_15-20250222-0ubuntu1_amd64.deb ... 223s Unpacking libtsan2:amd64 (15-20250222-0ubuntu1) ... 223s Selecting previously unselected package libubsan1:amd64. 223s Preparing to unpack .../11-libubsan1_15-20250222-0ubuntu1_amd64.deb ... 223s Unpacking libubsan1:amd64 (15-20250222-0ubuntu1) ... 223s Selecting previously unselected package libhwasan0:amd64. 223s Preparing to unpack .../12-libhwasan0_15-20250222-0ubuntu1_amd64.deb ... 223s Unpacking libhwasan0:amd64 (15-20250222-0ubuntu1) ... 223s Selecting previously unselected package libquadmath0:amd64. 223s Preparing to unpack .../13-libquadmath0_15-20250222-0ubuntu1_amd64.deb ... 223s Unpacking libquadmath0:amd64 (15-20250222-0ubuntu1) ... 223s Selecting previously unselected package libgcc-14-dev:amd64. 223s Preparing to unpack .../14-libgcc-14-dev_14.2.0-17ubuntu3_amd64.deb ... 223s Unpacking libgcc-14-dev:amd64 (14.2.0-17ubuntu3) ... 223s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 223s Preparing to unpack .../15-gcc-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 223s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 223s Selecting previously unselected package gcc-14. 223s Preparing to unpack .../16-gcc-14_14.2.0-17ubuntu3_amd64.deb ... 223s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 223s Selecting previously unselected package gcc-x86-64-linux-gnu. 223s Preparing to unpack .../17-gcc-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 223s Unpacking gcc-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 223s Selecting previously unselected package gcc. 223s Preparing to unpack .../18-gcc_4%3a14.2.0-1ubuntu1_amd64.deb ... 223s Unpacking gcc (4:14.2.0-1ubuntu1) ... 223s Selecting previously unselected package libstdc++-14-dev:amd64. 223s Preparing to unpack .../19-libstdc++-14-dev_14.2.0-17ubuntu3_amd64.deb ... 223s Unpacking libstdc++-14-dev:amd64 (14.2.0-17ubuntu3) ... 224s Selecting previously unselected package g++-14-x86-64-linux-gnu. 224s Preparing to unpack .../20-g++-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 224s Unpacking g++-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 224s Selecting previously unselected package g++-14. 224s Preparing to unpack .../21-g++-14_14.2.0-17ubuntu3_amd64.deb ... 224s Unpacking g++-14 (14.2.0-17ubuntu3) ... 224s Selecting previously unselected package g++-x86-64-linux-gnu. 224s Preparing to unpack .../22-g++-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 224s Unpacking g++-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 224s Selecting previously unselected package g++. 224s Preparing to unpack .../23-g++_4%3a14.2.0-1ubuntu1_amd64.deb ... 224s Unpacking g++ (4:14.2.0-1ubuntu1) ... 224s Selecting previously unselected package build-essential. 224s Preparing to unpack .../24-build-essential_12.10ubuntu1_amd64.deb ... 224s Unpacking build-essential (12.10ubuntu1) ... 224s Selecting previously unselected package dctrl-tools. 224s Preparing to unpack .../25-dctrl-tools_2.24-3build3_amd64.deb ... 224s Unpacking dctrl-tools (2.24-3build3) ... 224s Selecting previously unselected package libgfortran-14-dev:amd64. 224s Preparing to unpack .../26-libgfortran-14-dev_14.2.0-17ubuntu3_amd64.deb ... 224s Unpacking libgfortran-14-dev:amd64 (14.2.0-17ubuntu3) ... 224s Selecting previously unselected package gfortran-14-x86-64-linux-gnu. 224s Preparing to unpack .../27-gfortran-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 224s Unpacking gfortran-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 224s Selecting previously unselected package gfortran-14. 224s Preparing to unpack .../28-gfortran-14_14.2.0-17ubuntu3_amd64.deb ... 224s Unpacking gfortran-14 (14.2.0-17ubuntu3) ... 224s Selecting previously unselected package gfortran-x86-64-linux-gnu. 224s Preparing to unpack .../29-gfortran-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 224s Unpacking gfortran-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 224s Selecting previously unselected package gfortran. 224s Preparing to unpack .../30-gfortran_4%3a14.2.0-1ubuntu1_amd64.deb ... 224s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 224s Selecting previously unselected package icu-devtools. 224s Preparing to unpack .../31-icu-devtools_76.1-1ubuntu2_amd64.deb ... 224s Unpacking icu-devtools (76.1-1ubuntu2) ... 224s Selecting previously unselected package libblas-dev:amd64. 224s Preparing to unpack .../32-libblas-dev_3.12.1-2_amd64.deb ... 224s Unpacking libblas-dev:amd64 (3.12.1-2) ... 224s Selecting previously unselected package libbz2-dev:amd64. 224s Preparing to unpack .../33-libbz2-dev_1.0.8-6_amd64.deb ... 224s Unpacking libbz2-dev:amd64 (1.0.8-6) ... 224s Selecting previously unselected package libdeflate-dev:amd64. 224s Preparing to unpack .../34-libdeflate-dev_1.23-1_amd64.deb ... 224s Unpacking libdeflate-dev:amd64 (1.23-1) ... 224s Selecting previously unselected package libicu-dev:amd64. 224s Preparing to unpack .../35-libicu-dev_76.1-1ubuntu2_amd64.deb ... 224s Unpacking libicu-dev:amd64 (76.1-1ubuntu2) ... 225s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 225s Preparing to unpack .../36-libjpeg-turbo8-dev_2.1.5-3ubuntu2_amd64.deb ... 225s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-3ubuntu2) ... 225s Selecting previously unselected package libjpeg8-dev:amd64. 225s Preparing to unpack .../37-libjpeg8-dev_8c-2ubuntu11_amd64.deb ... 225s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu11) ... 225s Selecting previously unselected package libjpeg-dev:amd64. 225s Preparing to unpack .../38-libjpeg-dev_8c-2ubuntu11_amd64.deb ... 225s Unpacking libjpeg-dev:amd64 (8c-2ubuntu11) ... 225s Selecting previously unselected package liblapack-dev:amd64. 225s Preparing to unpack .../39-liblapack-dev_3.12.1-2_amd64.deb ... 225s Unpacking liblapack-dev:amd64 (3.12.1-2) ... 225s Selecting previously unselected package libncurses-dev:amd64. 225s Preparing to unpack .../40-libncurses-dev_6.5+20250216-2_amd64.deb ... 225s Unpacking libncurses-dev:amd64 (6.5+20250216-2) ... 225s Selecting previously unselected package libpcre2-16-0:amd64. 225s Preparing to unpack .../41-libpcre2-16-0_10.45-1_amd64.deb ... 225s Unpacking libpcre2-16-0:amd64 (10.45-1) ... 225s Selecting previously unselected package libpcre2-32-0:amd64. 225s Preparing to unpack .../42-libpcre2-32-0_10.45-1_amd64.deb ... 225s Unpacking libpcre2-32-0:amd64 (10.45-1) ... 225s Selecting previously unselected package libpcre2-posix3:amd64. 225s Preparing to unpack .../43-libpcre2-posix3_10.45-1_amd64.deb ... 225s Unpacking libpcre2-posix3:amd64 (10.45-1) ... 225s Selecting previously unselected package libpcre2-dev:amd64. 225s Preparing to unpack .../44-libpcre2-dev_10.45-1_amd64.deb ... 225s Unpacking libpcre2-dev:amd64 (10.45-1) ... 225s Selecting previously unselected package libpkgconf3:amd64. 225s Preparing to unpack .../45-libpkgconf3_1.8.1-4_amd64.deb ... 225s Unpacking libpkgconf3:amd64 (1.8.1-4) ... 225s Selecting previously unselected package zlib1g-dev:amd64. 225s Preparing to unpack .../46-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ... 225s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 225s Selecting previously unselected package libpng-dev:amd64. 225s Preparing to unpack .../47-libpng-dev_1.6.47-1_amd64.deb ... 225s Unpacking libpng-dev:amd64 (1.6.47-1) ... 225s Selecting previously unselected package libreadline-dev:amd64. 225s Preparing to unpack .../48-libreadline-dev_8.2-6_amd64.deb ... 225s Unpacking libreadline-dev:amd64 (8.2-6) ... 225s Selecting previously unselected package liblzma-dev:amd64. 225s Preparing to unpack .../49-liblzma-dev_5.6.4-1_amd64.deb ... 225s Unpacking liblzma-dev:amd64 (5.6.4-1) ... 225s Selecting previously unselected package pkgconf-bin. 225s Preparing to unpack .../50-pkgconf-bin_1.8.1-4_amd64.deb ... 225s Unpacking pkgconf-bin (1.8.1-4) ... 225s Selecting previously unselected package pkgconf:amd64. 225s Preparing to unpack .../51-pkgconf_1.8.1-4_amd64.deb ... 225s Unpacking pkgconf:amd64 (1.8.1-4) ... 225s Selecting previously unselected package libtirpc-dev:amd64. 225s Preparing to unpack .../52-libtirpc-dev_1.3.4+ds-1.3_amd64.deb ... 225s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1.3) ... 225s Selecting previously unselected package r-base-dev. 225s Preparing to unpack .../53-r-base-dev_4.4.3-1_all.deb ... 225s Unpacking r-base-dev (4.4.3-1) ... 225s Selecting previously unselected package pkg-r-autopkgtest. 225s Preparing to unpack .../54-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 225s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 225s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-3ubuntu2) ... 225s Setting up libncurses-dev:amd64 (6.5+20250216-2) ... 225s Setting up libreadline-dev:amd64 (8.2-6) ... 225s Setting up libpcre2-16-0:amd64 (10.45-1) ... 225s Setting up libpcre2-32-0:amd64 (10.45-1) ... 225s Setting up libtirpc-dev:amd64 (1.3.4+ds-1.3) ... 225s Setting up libpkgconf3:amd64 (1.8.1-4) ... 225s Setting up libquadmath0:amd64 (15-20250222-0ubuntu1) ... 225s Setting up libmpc3:amd64 (1.3.1-1build2) ... 225s Setting up icu-devtools (76.1-1ubuntu2) ... 225s Setting up pkgconf-bin (1.8.1-4) ... 225s Setting up liblzma-dev:amd64 (5.6.4-1) ... 225s Setting up libubsan1:amd64 (15-20250222-0ubuntu1) ... 225s Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 225s Setting up libpcre2-posix3:amd64 (10.45-1) ... 225s Setting up libhwasan0:amd64 (15-20250222-0ubuntu1) ... 225s Setting up libasan8:amd64 (15-20250222-0ubuntu1) ... 225s Setting up libtsan2:amd64 (15-20250222-0ubuntu1) ... 225s Setting up libjpeg8-dev:amd64 (8c-2ubuntu11) ... 225s Setting up libisl23:amd64 (0.27-1) ... 225s Setting up libdeflate-dev:amd64 (1.23-1) ... 225s Setting up libicu-dev:amd64 (76.1-1ubuntu2) ... 225s Setting up libcc1-0:amd64 (15-20250222-0ubuntu1) ... 225s Setting up liblsan0:amd64 (15-20250222-0ubuntu1) ... 225s Setting up libblas-dev:amd64 (3.12.1-2) ... 225s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode 225s Setting up dctrl-tools (2.24-3build3) ... 226s Setting up libitm1:amd64 (15-20250222-0ubuntu1) ... 226s Setting up libbz2-dev:amd64 (1.0.8-6) ... 226s Setting up libpcre2-dev:amd64 (10.45-1) ... 226s Setting up libpng-dev:amd64 (1.6.47-1) ... 226s Setting up libjpeg-dev:amd64 (8c-2ubuntu11) ... 226s Setting up pkgconf:amd64 (1.8.1-4) ... 226s Setting up liblapack-dev:amd64 (3.12.1-2) ... 226s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode 226s Setting up cpp-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 226s Setting up cpp-14 (14.2.0-17ubuntu3) ... 226s Setting up libgcc-14-dev:amd64 (14.2.0-17ubuntu3) ... 226s Setting up libstdc++-14-dev:amd64 (14.2.0-17ubuntu3) ... 226s Setting up cpp-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 226s Setting up libgfortran-14-dev:amd64 (14.2.0-17ubuntu3) ... 226s Setting up cpp (4:14.2.0-1ubuntu1) ... 226s Setting up gcc-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 226s Setting up gcc-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 226s Setting up gcc-14 (14.2.0-17ubuntu3) ... 226s Setting up gfortran-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 226s Setting up g++-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 226s Setting up g++-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 226s Setting up g++-14 (14.2.0-17ubuntu3) ... 226s Setting up gfortran-14 (14.2.0-17ubuntu3) ... 226s Setting up gfortran-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 226s Setting up gcc (4:14.2.0-1ubuntu1) ... 226s Setting up g++ (4:14.2.0-1ubuntu1) ... 226s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 226s Setting up build-essential (12.10ubuntu1) ... 226s Setting up gfortran (4:14.2.0-1ubuntu1) ... 226s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 226s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 226s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 226s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 226s Setting up r-base-dev (4.4.3-1) ... 226s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 226s Processing triggers for libc-bin (2.41-1ubuntu2) ... 226s Processing triggers for man-db (2.13.0-1) ... 227s Processing triggers for install-info (7.1.1-1) ... 228s autopkgtest [22:18:15]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 228s autopkgtest [22:18:15]: test pkg-r-autopkgtest: [----------------------- 228s Test: Try to load the R library libcoin 228s 228s R version 4.4.3 (2025-02-28) -- "Trophy Case" 228s Copyright (C) 2025 The R Foundation for Statistical Computing 228s Platform: x86_64-pc-linux-gnu 228s 228s R is free software and comes with ABSOLUTELY NO WARRANTY. 228s You are welcome to redistribute it under certain conditions. 228s Type 'license()' or 'licence()' for distribution details. 228s 228s R is a collaborative project with many contributors. 228s Type 'contributors()' for more information and 228s 'citation()' on how to cite R or R packages in publications. 228s 228s Type 'demo()' for some demos, 'help()' for on-line help, or 228s 'help.start()' for an HTML browser interface to help. 228s Type 'q()' to quit R. 228s 228s > library('libcoin') 228s > 228s > 228s Other tests are currently unsupported! 228s They will be progressively added. 229s autopkgtest [22:18:16]: test pkg-r-autopkgtest: -----------------------] 229s pkg-r-autopkgtest PASS 229s autopkgtest [22:18:16]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 230s autopkgtest [22:18:17]: @@@@@@@@@@@@@@@@@@@@ summary 230s run-unit-test PASS 230s pkg-r-autopkgtest PASS 248s nova [W] Skipping flock for amd64 248s Creating nova instance adt-plucky-amd64-r-cran-libcoin-20250315-221427-juju-7f2275-prod-proposed-migration-environment-15-f7cc597d-986c-40e3-901a-28fbaea26402 from image adt/ubuntu-plucky-amd64-server-20250304.img (UUID 9c7d4da5-d95f-4c85-ac1f-51eb37e75c4c)... 248s nova [W] Timed out waiting for 69523d2a-e2a4-4cfe-ad1f-ada4a9d87a6f to get deleted.