0s autopkgtest [22:09:55]: starting date and time: 2025-03-15 22:09:55+0000
  0s autopkgtest [22:09:55]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
  0s autopkgtest [22:09:55]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.9i3sc8vs/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-cran-geosphere --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@lcy02-71.secgroup --name adt-plucky-amd64-r-cran-geosphere-20250315-220955-juju-7f2275-prod-proposed-migration-environment-2-dbe19235-9a82-4d89-b08f-3501e11e07f9 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
 49s autopkgtest [22:10:44]: testbed dpkg architecture: amd64
 49s autopkgtest [22:10:44]: testbed apt version: 2.9.31ubuntu1
 49s autopkgtest [22:10:44]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 49s autopkgtest [22:10:44]: testbed release detected to be: None
 49s autopkgtest [22:10:44]: updating testbed package index (apt update)
 49s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB]
 49s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
 49s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
 49s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
 49s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [369 kB]
 49s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [44.1 kB]
 49s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [14.5 kB]
 49s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [67.4 kB]
 49s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [85.7 kB]
 49s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 c-n-f Metadata [1852 B]
 49s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 c-n-f Metadata [116 B]
 49s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [174 kB]
 49s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [342 kB]
 49s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 c-n-f Metadata [15.3 kB]
 49s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [8544 B]
 49s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [16.1 kB]
 49s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 c-n-f Metadata [628 B]
 50s Fetched 1265 kB in 0s (4764 kB/s)
 51s Reading package lists...
 51s Reading package lists...
 51s Building dependency tree...
 51s Reading state information...
 51s Calculating upgrade...
 52s Calculating upgrade...
 52s The following package was automatically installed and is no longer required:
 52s   libnl-genl-3-200
 52s Use 'sudo apt autoremove' to remove it.
 52s The following NEW packages will be installed:
 52s   bpftool libdebuginfod-common libdebuginfod1t64 linux-headers-6.14.0-10
 52s   linux-headers-6.14.0-10-generic linux-image-6.14.0-10-generic
 52s   linux-modules-6.14.0-10-generic linux-modules-extra-6.14.0-10-generic
 52s   linux-perf linux-tools-6.14.0-10 linux-tools-6.14.0-10-generic pnp.ids
 52s The following packages will be upgraded:
 52s   apparmor apt apt-utils binutils binutils-common binutils-x86-64-linux-gnu
 52s   cloud-init cloud-init-base curl dosfstools fwupd gir1.2-girepository-2.0
 52s   gir1.2-glib-2.0 htop hwdata libapparmor1 libapt-pkg7.0 libaudit-common
 52s   libaudit1 libbinutils libbrotli1 libcap-ng0 libctf-nobfd0 libctf0
 52s   libcurl3t64-gnutls libcurl4t64 libestr0 libfwupd3 libgirepository-1.0-1
 52s   libglib2.0-0t64 libglib2.0-data libgprofng0 libjemalloc2 liblz4-1 liblzma5
 52s   libmm-glib0 libncurses6 libncursesw6 libnl-3-200 libnl-genl-3-200
 52s   libnl-route-3-200 libpci3 libpython3-stdlib libpython3.13
 52s   libpython3.13-minimal libpython3.13-stdlib libselinux1 libsframe1
 52s   libsqlite3-0 libtinfo6 libxml2 linux-firmware linux-generic
 52s   linux-headers-generic linux-headers-virtual linux-image-generic
 52s   linux-image-virtual linux-libc-dev linux-tools-common linux-virtual
 52s   media-types ncurses-base ncurses-bin ncurses-term pci.ids pciutils
 52s   pinentry-curses python-apt-common python3 python3-apt python3-cffi-backend
 52s   python3-dbus python3-gi python3-jinja2 python3-lazr.uri python3-markupsafe
 52s   python3-minimal python3-systemd python3-yaml python3.13 python3.13-gdbm
 52s   python3.13-minimal rsync rsyslog strace xz-utils
 52s 86 upgraded, 12 newly installed, 0 to remove and 0 not upgraded.
 52s Need to get 807 MB of archives.
 52s After this operation, 326 MB of additional disk space will be used.
 52s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-bin amd64 6.5+20250216-2 [194 kB]
 52s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-base all 6.5+20250216-2 [25.9 kB]
 52s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-term all 6.5+20250216-2 [276 kB]
 52s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 liblz4-1 amd64 1.10.0-4 [66.4 kB]
 52s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma5 amd64 5.6.4-1 [157 kB]
 52s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libapt-pkg7.0 amd64 2.9.33 [1138 kB]
 52s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 apt amd64 2.9.33 [1439 kB]
 52s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 apt-utils amd64 2.9.33 [222 kB]
 52s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-minimal amd64 3.13.2-2 [27.7 kB]
 52s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 python3 amd64 3.13.2-2 [24.0 kB]
 52s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13 amd64 3.13.2-2 [2341 kB]
 52s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 media-types all 13.0.0 [29.9 kB]
 52s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses6 amd64 6.5+20250216-2 [126 kB]
 52s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libncursesw6 amd64 6.5+20250216-2 [165 kB]
 52s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libtinfo6 amd64 6.5+20250216-2 [119 kB]
 52s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libsqlite3-0 amd64 3.46.1-2 [715 kB]
 52s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.2-2 [735 kB]
 52s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.2-2 [2365 kB]
 52s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.2-2 [883 kB]
 52s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.2-2 [2066 kB]
 52s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.4 kB]
 52s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 rsync amd64 3.4.1+ds1-3 [482 kB]
 52s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod-common all 0.192-4 [15.4 kB]
 52s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit-common all 1:4.0.2-2ubuntu2 [6628 B]
 52s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libcap-ng0 amd64 0.8.5-4build1 [15.6 kB]
 52s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit1 amd64 1:4.0.2-2ubuntu2 [54.0 kB]
 52s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libselinux1 amd64 3.7-3ubuntu3 [87.3 kB]
 52s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-girepository-2.0 amd64 1.83.4-1 [25.3 kB]
 52s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-glib-2.0 amd64 2.84.0-1 [184 kB]
 52s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-0t64 amd64 2.84.0-1 [1669 kB]
 52s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libgirepository-1.0-1 amd64 1.83.4-1 [89.5 kB]
 52s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libapparmor1 amd64 4.1.0~beta5-0ubuntu8 [55.0 kB]
 52s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libestr0 amd64 0.1.11-2 [8340 B]
 52s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-data all 2.84.0-1 [53.0 kB]
 52s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2ubuntu5 [772 kB]
 52s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 python-apt-common all 2.9.9build1 [21.3 kB]
 52s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-apt amd64 2.9.9build1 [172 kB]
 52s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-cffi-backend amd64 1.17.1-2build2 [96.6 kB]
 52s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dbus amd64 1.3.2-5build5 [102 kB]
 52s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-4build1 [252 kB]
 52s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-yaml amd64 6.0.2-1build2 [144 kB]
 52s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 rsyslog amd64 8.2412.0-2ubuntu2 [555 kB]
 52s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 apparmor amd64 4.1.0~beta5-0ubuntu8 [701 kB]
 52s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 dosfstools amd64 4.2-1.2 [95.0 kB]
 52s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-genl-3-200 amd64 3.7.0-1 [12.2 kB]
 52s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-route-3-200 amd64 3.7.0-1 [191 kB]
 52s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-3-200 amd64 3.7.0-1 [64.9 kB]
 52s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 pci.ids all 0.0~2025.03.09-1 [285 kB]
 52s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 pciutils amd64 1:3.13.0-2 [110 kB]
 52s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libpci3 amd64 1:3.13.0-2 [39.8 kB]
 52s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 strace amd64 6.13+ds-1ubuntu1 [622 kB]
 52s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 xz-utils amd64 5.6.4-1 [278 kB]
 52s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libgprofng0 amd64 2.44-3ubuntu1 [886 kB]
 52s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf0 amd64 2.44-3ubuntu1 [96.5 kB]
 52s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf-nobfd0 amd64 2.44-3ubuntu1 [98.9 kB]
 52s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-x86-64-linux-gnu amd64 2.44-3ubuntu1 [1108 kB]
 52s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libbinutils amd64 2.44-3ubuntu1 [585 kB]
 52s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils amd64 2.44-3ubuntu1 [208 kB]
 52s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-common amd64 2.44-3ubuntu1 [215 kB]
 52s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libsframe1 amd64 2.44-3ubuntu1 [14.8 kB]
 52s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 hwdata all 0.393-3 [1562 B]
 52s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 pnp.ids all 0.393-3 [29.5 kB]
 52s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-common all 6.14.0-10.10 [295 kB]
 52s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 bpftool amd64 7.6.0+6.14.0-10.10 [1147 kB]
 52s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-markupsafe amd64 2.1.5-1build4 [13.4 kB]
 52s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB]
 53s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init-base all 25.1-0ubuntu3 [616 kB]
 53s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libbrotli1 amd64 1.1.0-2build4 [365 kB]
 53s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 curl amd64 8.12.1-3ubuntu1 [258 kB]
 53s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4t64 amd64 8.12.1-3ubuntu1 [437 kB]
 53s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl3t64-gnutls amd64 8.12.1-3ubuntu1 [432 kB]
 53s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 fwupd amd64 2.0.6-4 [5408 kB]
 53s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libfwupd3 amd64 2.0.6-4 [136 kB]
 53s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libmm-glib0 amd64 1.23.4-0ubuntu3 [251 kB]
 53s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 htop amd64 3.4.0-2 [195 kB]
 53s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod1t64 amd64 0.192-4 [21.0 kB]
 53s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libjemalloc2 amd64 5.3.0-3 [277 kB]
 53s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-firmware amd64 20250310.git9e1370d3-0ubuntu1 [571 MB]
 58s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-6.14.0-10-generic amd64 6.14.0-10.10 [41.2 MB]
 58s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-6.14.0-10-generic amd64 6.14.0-10.10 [15.3 MB]
 59s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-extra-6.14.0-10-generic amd64 6.14.0-10.10 [120 MB]
 60s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-generic amd64 6.14.0-10.10 [1730 B]
 60s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-generic amd64 6.14.0-10.10 [11.1 kB]
 60s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-virtual amd64 6.14.0-10.10 [1722 B]
 60s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-virtual amd64 6.14.0-10.10 [11.1 kB]
 60s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-virtual amd64 6.14.0-10.10 [1642 B]
 60s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10 all 6.14.0-10.10 [14.2 MB]
 60s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10-generic amd64 6.14.0-10.10 [3915 kB]
 60s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-generic amd64 6.14.0-10.10 [11.0 kB]
 60s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-libc-dev amd64 6.14.0-10.10 [1723 kB]
 60s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-perf amd64 6.14.0-10.10 [4122 kB]
 60s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10 amd64 6.14.0-10.10 [1394 kB]
 60s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10-generic amd64 6.14.0-10.10 [830 B]
 60s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 pinentry-curses amd64 1.3.1-2ubuntu3 [42.3 kB]
 60s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lazr.uri all 1.0.6-6 [13.7 kB]
 60s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-systemd amd64 235-1build6 [43.9 kB]
 60s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-gdbm amd64 3.13.2-2 [31.9 kB]
 60s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init all 25.1-0ubuntu3 [2100 B]
 60s Preconfiguring packages ...
 60s Fetched 807 MB in 8s (102 MB/s)
 61s (Reading database ... 
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 109138 files and directories currently installed.)
 61s Preparing to unpack .../ncurses-bin_6.5+20250216-2_amd64.deb ...
 61s Unpacking ncurses-bin (6.5+20250216-2) over (6.5+20250216-1) ...
 61s Setting up ncurses-bin (6.5+20250216-2) ...
 61s (Reading database ... 
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 109138 files and directories currently installed.)
 61s Preparing to unpack .../ncurses-base_6.5+20250216-2_all.deb ...
 61s Unpacking ncurses-base (6.5+20250216-2) over (6.5+20250216-1) ...
 61s Setting up ncurses-base (6.5+20250216-2) ...
 61s (Reading database ... 
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 109138 files and directories currently installed.)
 61s Preparing to unpack .../ncurses-term_6.5+20250216-2_all.deb ...
 61s Unpacking ncurses-term (6.5+20250216-2) over (6.5+20250216-1) ...
 61s Preparing to unpack .../liblz4-1_1.10.0-4_amd64.deb ...
 61s Unpacking liblz4-1:amd64 (1.10.0-4) over (1.10.0-3) ...
 61s Setting up liblz4-1:amd64 (1.10.0-4) ...
 62s (Reading database ... 
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 109138 files and directories currently installed.)
 62s Preparing to unpack .../liblzma5_5.6.4-1_amd64.deb ...
 62s Unpacking liblzma5:amd64 (5.6.4-1) over (5.6.3-1) ...
 62s Setting up liblzma5:amd64 (5.6.4-1) ...
 62s (Reading database ... 
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 109138 files and directories currently installed.)
 62s Preparing to unpack .../libapt-pkg7.0_2.9.33_amd64.deb ...
 62s Unpacking libapt-pkg7.0:amd64 (2.9.33) over (2.9.31ubuntu1) ...
 62s Setting up libapt-pkg7.0:amd64 (2.9.33) ...
 62s (Reading database ... 
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 79s Setting up apt-utils (2.9.33) ...
 79s Setting up libdebuginfod-common (0.192-4) ...
 80s Setting up linux-firmware (20250310.git9e1370d3-0ubuntu1) ...
 80s Setting up bpftool (7.6.0+6.14.0-10.10) ...
 80s Setting up libestr0:amd64 (0.1.11-2) ...
 80s Setting up libbrotli1:amd64 (1.1.0-2build4) ...
 80s Setting up libsqlite3-0:amd64 (3.46.1-2) ...
 80s Setting up dosfstools (4.2-1.2) ...
 80s Setting up rsyslog (8.2412.0-2ubuntu2) ...
 80s info: The user `syslog' is already a member of `adm'.
 81s Setting up binutils-common:amd64 (2.44-3ubuntu1) ...
 81s Setting up libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) ...
 81s Setting up linux-libc-dev:amd64 (6.14.0-10.10) ...
 81s Setting up libctf-nobfd0:amd64 (2.44-3ubuntu1) ...
 81s Setting up linux-headers-generic (6.14.0-10.10) ...
 81s Setting up libjemalloc2:amd64 (5.3.0-3) ...
 81s Setting up libsframe1:amd64 (2.44-3ubuntu1) ...
 81s Setting up libpython3.13-minimal:amd64 (3.13.2-2) ...
 81s Setting up apparmor (4.1.0~beta5-0ubuntu8) ...
 81s Installing new version of config file /etc/apparmor.d/openvpn ...
 82s Reloading AppArmor profiles 
 83s Setting up libglib2.0-0t64:amd64 (2.84.0-1) ...
 83s No schema files found: doing nothing.
 83s Setting up libglib2.0-data (2.84.0-1) ...
 83s Setting up libncurses6:amd64 (6.5+20250216-2) ...
 83s Setting up strace (6.13+ds-1ubuntu1) ...
 83s Setting up xz-utils (5.6.4-1) ...
 83s Setting up gir1.2-glib-2.0:amd64 (2.84.0-1) ...
 83s Setting up linux-modules-6.14.0-10-generic (6.14.0-10.10) ...
 86s Setting up libncursesw6:amd64 (6.5+20250216-2) ...
 86s Setting up libpci3:amd64 (1:3.13.0-2) ...
 86s Setting up python-apt-common (2.9.9build1) ...
 86s Setting up libmm-glib0:amd64 (1.23.4-0ubuntu3) ...
 86s Setting up pnp.ids (0.393-3) ...
 86s Setting up libnl-3-200:amd64 (3.7.0-1) ...
 86s Setting up python3.13-minimal (3.13.2-2) ...
 86s Setting up libgirepository-1.0-1:amd64 (1.83.4-1) ...
 86s Setting up libbinutils:amd64 (2.44-3ubuntu1) ...
 86s Setting up libpython3.13-stdlib:amd64 (3.13.2-2) ...
 86s Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2ubuntu5) ...
 86s Setting up rsync (3.4.1+ds1-3) ...
 87s rsync.service is a disabled or a static unit not running, not starting it.
 87s Setting up python3.13-gdbm (3.13.2-2) ...
 87s Setting up libpython3-stdlib:amd64 (3.13.2-2) ...
 87s Setting up ncurses-term (6.5+20250216-2) ...
 87s Setting up libctf0:amd64 (2.44-3ubuntu1) ...
 87s Setting up libpython3.13:amd64 (3.13.2-2) ...
 87s Setting up pinentry-curses (1.3.1-2ubuntu3) ...
 87s Setting up libdebuginfod1t64:amd64 (0.192-4) ...
 87s Setting up linux-headers-virtual (6.14.0-10.10) ...
 87s Setting up libcurl4t64:amd64 (8.12.1-3ubuntu1) ...
 87s Setting up python3.13 (3.13.2-2) ...
 88s Setting up htop (3.4.0-2) ...
 88s Setting up linux-image-6.14.0-10-generic (6.14.0-10.10) ...
 90s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.12.0-16-generic
 90s I: /boot/initrd.img.old is now a symlink to initrd.img-6.12.0-16-generic
 90s I: /boot/vmlinuz is now a symlink to vmlinuz-6.14.0-10-generic
 90s I: /boot/initrd.img is now a symlink to initrd.img-6.14.0-10-generic
 90s Setting up libfwupd3:amd64 (2.0.6-4) ...
 90s Setting up python3 (3.13.2-2) ...
 91s Setting up python3-markupsafe (2.1.5-1build4) ...
 91s Setting up linux-modules-extra-6.14.0-10-generic (6.14.0-10.10) ...
 93s Setting up libnl-route-3-200:amd64 (3.7.0-1) ...
 93s Setting up hwdata (0.393-3) ...
 93s Setting up python3-jinja2 (3.1.5-2ubuntu1) ...
 93s Setting up libgprofng0:amd64 (2.44-3ubuntu1) ...
 93s Setting up linux-perf (6.14.0-10.10) ...
 93s Setting up gir1.2-girepository-2.0:amd64 (1.83.4-1) ...
 93s Setting up python3-gi (3.50.0-4build1) ...
 93s Setting up pciutils (1:3.13.0-2) ...
 93s Setting up libnl-genl-3-200:amd64 (3.7.0-1) ...
 93s Setting up curl (8.12.1-3ubuntu1) ...
 93s Setting up linux-image-virtual (6.14.0-10.10) ...
 93s Setting up linux-tools-common (6.14.0-10.10) ...
 93s Setting up fwupd (2.0.6-4) ...
 94s fwupd-refresh.service is a disabled or a static unit not running, not starting it.
 94s fwupd.service is a disabled or a static unit not running, not starting it.
 94s Setting up python3-systemd (235-1build6) ...
 94s Setting up python3-cffi-backend:amd64 (1.17.1-2build2) ...
 94s Setting up binutils-x86-64-linux-gnu (2.44-3ubuntu1) ...
 94s Setting up linux-image-generic (6.14.0-10.10) ...
 94s Setting up python3-dbus (1.3.2-5build5) ...
 94s Setting up linux-tools-6.14.0-10 (6.14.0-10.10) ...
 94s Setting up linux-generic (6.14.0-10.10) ...
 94s Setting up python3-apt (2.9.9build1) ...
 94s Setting up python3-yaml (6.0.2-1build2) ...
 94s Setting up python3-lazr.uri (1.0.6-6) ...
 94s Setting up binutils (2.44-3ubuntu1) ...
 94s Setting up cloud-init-base (25.1-0ubuntu3) ...
 96s Setting up linux-virtual (6.14.0-10.10) ...
 96s Setting up linux-tools-6.14.0-10-generic (6.14.0-10.10) ...
 96s Setting up cloud-init (25.1-0ubuntu3) ...
 96s Processing triggers for systemd (257.3-1ubuntu3) ...
 96s Processing triggers for man-db (2.13.0-1) ...
 98s Processing triggers for dbus (1.16.2-1ubuntu1) ...
 98s Processing triggers for libc-bin (2.41-1ubuntu1) ...
 98s Processing triggers for initramfs-tools (0.146ubuntu1) ...
 98s update-initramfs: Generating /boot/initrd.img-6.12.0-16-generic
 98s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
109s Processing triggers for linux-image-6.14.0-10-generic (6.14.0-10.10) ...
109s /etc/kernel/postinst.d/initramfs-tools:
109s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic
109s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
120s /etc/kernel/postinst.d/zz-update-grub:
120s Sourcing file `/etc/default/grub'
120s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
120s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg'
120s Generating grub configuration file ...
120s Found linux image: /boot/vmlinuz-6.14.0-10-generic
120s Found initrd image: /boot/initrd.img-6.14.0-10-generic
121s Found linux image: /boot/vmlinuz-6.12.0-16-generic
121s Found initrd image: /boot/initrd.img-6.12.0-16-generic
121s Found linux image: /boot/vmlinuz-6.11.0-8-generic
121s Found initrd image: /boot/initrd.img-6.11.0-8-generic
121s Warning: os-prober will not be executed to detect other bootable partitions.
121s Systems on them will not be added to the GRUB boot configuration.
121s Check GRUB_DISABLE_OS_PROBER documentation entry.
121s Adding boot menu entry for UEFI Firmware Settings ...
121s done
122s Reading package lists...
122s Building dependency tree...
122s Reading state information...
123s Solving dependencies...
123s The following packages will be REMOVED:
123s   libnl-genl-3-200* libnsl2* libpython3.12-minimal* libpython3.12-stdlib*
123s   libpython3.12t64* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
123s   linux-headers-6.12.0-16* linux-headers-6.12.0-16-generic*
123s   linux-image-6.11.0-8-generic* linux-image-6.12.0-16-generic*
123s   linux-modules-6.11.0-8-generic* linux-modules-6.12.0-16-generic*
123s   linux-modules-extra-6.12.0-16-generic* linux-tools-6.11.0-8*
123s   linux-tools-6.11.0-8-generic* linux-tools-6.12.0-16*
123s   linux-tools-6.12.0-16-generic*
123s 0 upgraded, 0 newly installed, 18 to remove and 5 not upgraded.
123s After this operation, 545 MB disk space will be freed.
123s (Reading database ... 
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(Reading database ... 148643 files and directories currently installed.)
123s Removing libnl-genl-3-200:amd64 (3.7.0-1) ...
123s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ...
123s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ...
123s Removing libpython3.12t64:amd64 (3.12.9-1) ...
123s Removing libpython3.12-stdlib:amd64 (3.12.9-1) ...
124s Removing libnsl2:amd64 (1.3.0-3build3) ...
124s Removing libpython3.12-minimal:amd64 (3.12.9-1) ...
124s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
124s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
126s Removing linux-headers-6.12.0-16-generic (6.12.0-16.16) ...
127s Removing linux-headers-6.12.0-16 (6.12.0-16.16) ...
130s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ...
130s /etc/kernel/postrm.d/initramfs-tools:
130s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic
130s /etc/kernel/postrm.d/zz-update-grub:
130s Sourcing file `/etc/default/grub'
130s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
130s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg'
130s Generating grub configuration file ...
130s Found linux image: /boot/vmlinuz-6.14.0-10-generic
130s Found initrd image: /boot/initrd.img-6.14.0-10-generic
130s Found linux image: /boot/vmlinuz-6.12.0-16-generic
130s Found initrd image: /boot/initrd.img-6.12.0-16-generic
131s Warning: os-prober will not be executed to detect other bootable partitions.
131s Systems on them will not be added to the GRUB boot configuration.
131s Check GRUB_DISABLE_OS_PROBER documentation entry.
131s Adding boot menu entry for UEFI Firmware Settings ...
131s done
131s Removing linux-image-6.12.0-16-generic (6.12.0-16.16) ...
131s W: Removing the running kernel
131s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic
131s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic
131s /etc/kernel/postrm.d/initramfs-tools:
131s update-initramfs: Deleting /boot/initrd.img-6.12.0-16-generic
131s /etc/kernel/postrm.d/zz-update-grub:
131s Sourcing file `/etc/default/grub'
131s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
131s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg'
131s Generating grub configuration file ...
131s Found linux image: /boot/vmlinuz-6.14.0-10-generic
131s Found initrd image: /boot/initrd.img-6.14.0-10-generic
131s Warning: os-prober will not be executed to detect other bootable partitions.
131s Systems on them will not be added to the GRUB boot configuration.
131s Check GRUB_DISABLE_OS_PROBER documentation entry.
131s Adding boot menu entry for UEFI Firmware Settings ...
131s done
131s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
132s Removing linux-modules-extra-6.12.0-16-generic (6.12.0-16.16) ...
133s Removing linux-modules-6.12.0-16-generic (6.12.0-16.16) ...
133s Removing linux-tools-6.12.0-16-generic (6.12.0-16.16) ...
133s Removing linux-tools-6.12.0-16 (6.12.0-16.16) ...
134s Processing triggers for libc-bin (2.41-1ubuntu1) ...
134s (Reading database ... 
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(Reading database ... 76972 files and directories currently installed.)
134s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ...
134s Purging configuration files for libpython3.12-minimal:amd64 (3.12.9-1) ...
134s Purging configuration files for linux-modules-extra-6.12.0-16-generic (6.12.0-16.16) ...
134s Purging configuration files for linux-modules-6.12.0-16-generic (6.12.0-16.16) ...
134s dpkg: warning: while removing linux-modules-6.12.0-16-generic, directory '/lib/modules/6.12.0-16-generic' not empty so not removed
134s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
134s Purging configuration files for linux-image-6.12.0-16-generic (6.12.0-16.16) ...
134s rmdir: failed to remove '/lib/modules/6.12.0-16-generic': Directory not empty
134s autopkgtest [22:12:09]: upgrading testbed (apt dist-upgrade and autopurge)
134s Reading package lists...
135s Building dependency tree...
135s Reading state information...
135s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
136s Starting 2 pkgProblemResolver with broken count: 0
136s Done
136s Entering ResolveByKeep
137s 
137s Calculating upgrade...
137s The following packages will be upgraded:
137s   libc-bin libc-dev-bin libc6 libc6-dev locales
137s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
137s Need to get 10.5 MB of archives.
137s After this operation, 1024 B of additional disk space will be used.
137s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6-dev amd64 2.41-1ubuntu2 [2183 kB]
137s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-dev-bin amd64 2.41-1ubuntu2 [24.7 kB]
137s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6 amd64 2.41-1ubuntu2 [3327 kB]
138s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-bin amd64 2.41-1ubuntu2 [700 kB]
138s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 locales all 2.41-1ubuntu2 [4246 kB]
138s Preconfiguring packages ...
138s Fetched 10.5 MB in 0s (43.3 MB/s)
138s (Reading database ... 
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(Reading database ... 100%
(Reading database ... 76968 files and directories currently installed.)
138s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_amd64.deb ...
138s Unpacking libc6-dev:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
138s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_amd64.deb ...
138s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
138s Preparing to unpack .../libc6_2.41-1ubuntu2_amd64.deb ...
139s Unpacking libc6:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
139s Setting up libc6:amd64 (2.41-1ubuntu2) ...
139s (Reading database ... 
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(Reading database ... 76968 files and directories currently installed.)
139s Preparing to unpack .../libc-bin_2.41-1ubuntu2_amd64.deb ...
139s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
139s Setting up libc-bin (2.41-1ubuntu2) ...
139s (Reading database ... 
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(Reading database ... 76968 files and directories currently installed.)
139s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ...
139s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
139s Setting up locales (2.41-1ubuntu2) ...
140s Generating locales (this might take a while)...
141s   en_US.UTF-8... done
141s Generation complete.
141s Setting up libc-dev-bin (2.41-1ubuntu2) ...
141s Setting up libc6-dev:amd64 (2.41-1ubuntu2) ...
141s Processing triggers for man-db (2.13.0-1) ...
142s Processing triggers for systemd (257.3-1ubuntu3) ...
143s Reading package lists...
143s Building dependency tree...
143s Reading state information...
144s Starting pkgProblemResolver with broken count: 0
144s Starting 2 pkgProblemResolver with broken count: 0
144s Done
144s Solving dependencies...
144s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
144s autopkgtest [22:12:19]: rebooting testbed after setup commands that affected boot
148s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds...
160s autopkgtest [22:12:35]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 16:07:00 UTC 2025
160s autopkgtest [22:12:35]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-geosphere
161s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-geosphere 1.5-20-1 (dsc) [2158 B]
161s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-geosphere 1.5-20-1 (tar) [1121 kB]
161s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-geosphere 1.5-20-1 (diff) [3016 B]
161s gpgv: Signature made Tue Feb 25 01:51:50 2025 UTC
161s gpgv:                using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502
161s gpgv:                issuer "plessy@debian.org"
161s gpgv: Can't check signature: No public key
161s dpkg-source: warning: cannot verify inline signature for ./r-cran-geosphere_1.5-20-1.dsc: no acceptable signature found
162s autopkgtest [22:12:37]: testing package r-cran-geosphere version 1.5-20-1
162s autopkgtest [22:12:37]: build not needed
163s autopkgtest [22:12:38]: test vignette: preparing testbed
163s Reading package lists...
163s Building dependency tree...
163s Reading state information...
164s Starting pkgProblemResolver with broken count: 0
164s Starting 2 pkgProblemResolver with broken count: 0
164s Done
164s The following NEW packages will be installed:
164s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono gdal-data
164s   gdal-plugins libabsl20230802 libaec0 libaom3 libarmadillo14 libarpack2t64
164s   libavif16 libblas3 libblosc1 libcairo2 libcfitsio10t64 libdatrie1 libdav1d7
164s   libde265-0 libdeflate0 libfontconfig1 libfreexl1 libfyba0t64 libgav1-1
164s   libgdal36 libgeos-c1t64 libgeos3.13.1 libgeotiff5 libgfortran5 libgif7
164s   libgomp1 libgpgmepp6t64 libgraphite2-3 libharfbuzz0b libhdf4-0-alt
164s   libhdf5-310 libhdf5-hl-310 libheif-plugin-aomdec libheif-plugin-libde265
164s   libheif1 libice6 libjbig0 libjpeg-turbo8 libjpeg8 libkmlbase1t64
164s   libkmldom1t64 libkmlengine1t64 liblapack3 liblcms2-2 liblerc4 libltdl7
164s   libminizip1t64 libmysqlclient24 libnetcdf22 libodbc2 libodbcinst2 libogdi4.1
164s   libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
164s   libpaper-utils libpaper2 libpixman-1-0 libpoppler147 libpq5 libproj25
164s   libqhull-r8.0 librav1e0.7 librttopo1 libsharpyuv0 libsm6 libsnappy1v5
164s   libspatialite8t64 libsvtav1enc2 libsz2 libtcl8.6 libthai-data libthai0
164s   libtiff6 libtk8.6 liburiparser1 libwebp7 libxcb-render0 libxcb-shm0
164s   libxerces-c3.2t64 libxft2 libxrender1 libxss1 libxt6t64 libyuv0 littler
164s   mysql-common proj-data r-base-core r-cran-geosphere r-cran-lattice
164s   r-cran-littler r-cran-pkgkitten r-cran-raster r-cran-rcpp r-cran-sp
164s   r-cran-terra unixodbc-common unzip x11-common xdg-utils zip
164s 0 upgraded, 108 newly installed, 0 to remove and 0 not upgraded.
164s Need to get 96.7 MB of archives.
164s After this operation, 254 MB of additional disk space will be used.
164s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB]
164s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB]
164s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-2ubuntu1 [37.4 kB]
164s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-2ubuntu1 [164 kB]
164s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-2ubuntu1 [180 kB]
164s Get:6 http://ftpmaster.internal/ubuntu plucky/universe amd64 gdal-data all 3.10.2+dfsg-1build3 [269 kB]
164s Get:7 http://ftpmaster.internal/ubuntu plucky/universe amd64 gdal-plugins amd64 3.10.2+dfsg-1build3 [25.7 kB]
164s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libabsl20230802 amd64 20230802.1-4.2 [567 kB]
164s Get:9 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB]
164s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libaom3 amd64 3.12.0-1 [2742 kB]
164s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.1-2 [359 kB]
164s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 15-20250222-0ubuntu1 [919 kB]
165s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB]
165s Get:14 http://ftpmaster.internal/ubuntu plucky/universe amd64 libarpack2t64 amd64 3.9.1-4 [120 kB]
165s Get:15 http://ftpmaster.internal/ubuntu plucky/universe amd64 libarmadillo14 amd64 1:14.2.3+dfsg-1 [105 kB]
165s Get:16 http://ftpmaster.internal/ubuntu plucky/universe amd64 libdav1d7 amd64 1.5.1-1 [743 kB]
165s Get:17 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgav1-1 amd64 0.19.0-3 [697 kB]
165s Get:18 http://ftpmaster.internal/ubuntu plucky/universe amd64 librav1e0.7 amd64 0.7.1-9 [1025 kB]
165s Get:19 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsvtav1enc2 amd64 2.3.0+dfsg-1 [2686 kB]
165s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB]
165s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B]
165s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libyuv0 amd64 0.0.1904.20250204-1 [354 kB]
165s Get:23 http://ftpmaster.internal/ubuntu plucky/universe amd64 libavif16 amd64 1.2.0-1ubuntu1 [140 kB]
165s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libsnappy1v5 amd64 1.2.1-1 [30.4 kB]
165s Get:25 http://ftpmaster.internal/ubuntu plucky/universe amd64 libblosc1 amd64 1.21.5+ds-1build1 [36.2 kB]
165s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB]
165s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB]
165s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B]
165s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB]
165s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB]
165s Get:31 http://ftpmaster.internal/ubuntu plucky/universe amd64 libcfitsio10t64 amd64 4.5.0-5 [629 kB]
165s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB]
165s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libde265-0 amd64 1.0.15-1build5 [285 kB]
165s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB]
165s Get:35 http://ftpmaster.internal/ubuntu plucky/universe amd64 libfyba0t64 amd64 4.1.1-11build1 [119 kB]
165s Get:36 http://ftpmaster.internal/ubuntu plucky/universe amd64 libminizip1t64 amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [22.9 kB]
165s Get:37 http://ftpmaster.internal/ubuntu plucky/universe amd64 libfreexl1 amd64 2.0.0-1build2 [41.7 kB]
165s Get:38 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeos3.13.1 amd64 3.13.1-1 [1017 kB]
165s Get:39 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeos-c1t64 amd64 3.13.1-1 [103 kB]
165s Get:40 http://ftpmaster.internal/ubuntu plucky/universe amd64 proj-data all 9.5.1-1 [7924 kB]
165s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB]
165s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB]
165s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB]
165s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB]
165s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB]
165s Get:46 http://ftpmaster.internal/ubuntu plucky/universe amd64 libproj25 amd64 9.5.1-1 [1499 kB]
165s Get:47 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeotiff5 amd64 1.7.4-1 [60.2 kB]
165s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libgif7 amd64 5.2.2-1ubuntu2 [36.0 kB]
165s Get:49 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B]
165s Get:50 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf4-0-alt amd64 4.3.0-1 [285 kB]
165s Get:51 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-310 amd64 1.14.5+repack-3 [1519 kB]
165s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif-plugin-aomdec amd64 1.19.7-1 [11.6 kB]
165s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif-plugin-libde265 amd64 1.19.7-1 [9060 B]
165s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif1 amd64 1.19.7-1 [428 kB]
165s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 liburiparser1 amd64 0.9.8+dfsg-2 [46.8 kB]
165s Get:56 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmlbase1t64 amd64 1.3.0-12build1 [49.9 kB]
165s Get:57 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmldom1t64 amd64 1.3.0-12build1 [156 kB]
165s Get:58 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmlengine1t64 amd64 1.3.0-12build1 [71.4 kB]
165s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 mysql-common all 5.8+1.1.1ubuntu1 [6922 B]
165s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libmysqlclient24 amd64 8.4.4-0ubuntu2 [1257 kB]
165s Get:61 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-310 amd64 1.14.5+repack-3 [62.6 kB]
165s Get:62 http://ftpmaster.internal/ubuntu plucky/universe amd64 libnetcdf22 amd64 1:4.9.3-1 [574 kB]
165s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl7 amd64 2.5.4-4 [46.5 kB]
165s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libodbc2 amd64 2.3.12-2ubuntu1 [186 kB]
165s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 unixodbc-common all 2.3.12-2ubuntu1 [9044 B]
165s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libodbcinst2 amd64 2.3.12-2ubuntu1 [34.1 kB]
165s Get:67 http://ftpmaster.internal/ubuntu plucky/universe amd64 libogdi4.1 amd64 4.1.1+ds-5 [219 kB]
165s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libopenjp2-7 amd64 2.5.3-2 [218 kB]
165s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 libgpgmepp6t64 amd64 1.24.2-1ubuntu2 [126 kB]
165s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 liblcms2-2 amd64 2.16-2 [212 kB]
165s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libpoppler147 amd64 25.03.0-2 [1295 kB]
165s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 libpq5 amd64 17.4-1 [155 kB]
165s Get:73 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqhull-r8.0 amd64 2020.2-6build1 [193 kB]
165s Get:74 http://ftpmaster.internal/ubuntu plucky/universe amd64 librttopo1 amd64 1.1.0-4 [205 kB]
165s Get:75 http://ftpmaster.internal/ubuntu plucky/universe amd64 libspatialite8t64 amd64 5.1.0-3build1 [1919 kB]
165s Get:76 http://ftpmaster.internal/ubuntu plucky/universe amd64 libxerces-c3.2t64 amd64 3.2.4+debian-1.3build1 [1028 kB]
165s Get:77 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgdal36 amd64 3.10.2+dfsg-1build3 [10.3 MB]
165s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 15-20250222-0ubuntu1 [148 kB]
165s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB]
165s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB]
165s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB]
165s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB]
165s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB]
165s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB]
165s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.56.2-1 [255 kB]
165s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.56.2-1 [52.6 kB]
165s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.56.2-1 [29.1 kB]
165s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB]
165s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB]
165s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB]
165s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB]
165s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB]
165s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B]
165s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB]
165s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB]
165s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu2 [185 kB]
165s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB]
165s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
165s Get:99 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.3-1 [28.9 MB]
165s Get:100 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-2 [96.6 kB]
165s Get:101 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-2 [2554 B]
165s Get:102 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
165s Get:103 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.14-1 [1998 kB]
166s Get:104 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB]
166s Get:105 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sp amd64 1:2.2-0+dfsg-1 [1444 kB]
166s Get:106 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-geosphere amd64 1.5-20-1 [1202 kB]
166s Get:107 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-terra amd64 1.8-29-1 [4306 kB]
166s Get:108 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-raster amd64 3.6-31-1 [3176 kB]
166s Preconfiguring packages ...
166s Fetched 96.7 MB in 2s (57.7 MB/s)
166s Selecting previously unselected package fonts-dejavu-mono.
167s (Reading database ... 
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(Reading database ... 85%
(Reading database ... 90%
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(Reading database ... 76968 files and directories currently installed.)
167s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8_all.deb ...
167s Unpacking fonts-dejavu-mono (2.37-8) ...
167s Selecting previously unselected package fonts-dejavu-core.
167s Preparing to unpack .../001-fonts-dejavu-core_2.37-8_all.deb ...
167s Unpacking fonts-dejavu-core (2.37-8) ...
167s Selecting previously unselected package fontconfig-config.
167s Preparing to unpack .../002-fontconfig-config_2.15.0-2ubuntu1_amd64.deb ...
167s Unpacking fontconfig-config (2.15.0-2ubuntu1) ...
167s Selecting previously unselected package libfontconfig1:amd64.
167s Preparing to unpack .../003-libfontconfig1_2.15.0-2ubuntu1_amd64.deb ...
167s Unpacking libfontconfig1:amd64 (2.15.0-2ubuntu1) ...
167s Selecting previously unselected package fontconfig.
167s Preparing to unpack .../004-fontconfig_2.15.0-2ubuntu1_amd64.deb ...
167s Unpacking fontconfig (2.15.0-2ubuntu1) ...
167s Selecting previously unselected package gdal-data.
167s Preparing to unpack .../005-gdal-data_3.10.2+dfsg-1build3_all.deb ...
167s Unpacking gdal-data (3.10.2+dfsg-1build3) ...
167s Selecting previously unselected package gdal-plugins:amd64.
167s Preparing to unpack .../006-gdal-plugins_3.10.2+dfsg-1build3_amd64.deb ...
167s Unpacking gdal-plugins:amd64 (3.10.2+dfsg-1build3) ...
167s Selecting previously unselected package libabsl20230802:amd64.
167s Preparing to unpack .../007-libabsl20230802_20230802.1-4.2_amd64.deb ...
167s Unpacking libabsl20230802:amd64 (20230802.1-4.2) ...
167s Selecting previously unselected package libaec0:amd64.
167s Preparing to unpack .../008-libaec0_1.1.3-1_amd64.deb ...
167s Unpacking libaec0:amd64 (1.1.3-1) ...
167s Selecting previously unselected package libaom3:amd64.
167s Preparing to unpack .../009-libaom3_3.12.0-1_amd64.deb ...
167s Unpacking libaom3:amd64 (3.12.0-1) ...
167s Selecting previously unselected package libblas3:amd64.
167s Preparing to unpack .../010-libblas3_3.12.1-2_amd64.deb ...
167s Unpacking libblas3:amd64 (3.12.1-2) ...
167s Selecting previously unselected package libgfortran5:amd64.
167s Preparing to unpack .../011-libgfortran5_15-20250222-0ubuntu1_amd64.deb ...
167s Unpacking libgfortran5:amd64 (15-20250222-0ubuntu1) ...
167s Selecting previously unselected package liblapack3:amd64.
167s Preparing to unpack .../012-liblapack3_3.12.1-2_amd64.deb ...
167s Unpacking liblapack3:amd64 (3.12.1-2) ...
168s Selecting previously unselected package libarpack2t64:amd64.
168s Preparing to unpack .../013-libarpack2t64_3.9.1-4_amd64.deb ...
168s Unpacking libarpack2t64:amd64 (3.9.1-4) ...
168s Selecting previously unselected package libarmadillo14.
168s Preparing to unpack .../014-libarmadillo14_1%3a14.2.3+dfsg-1_amd64.deb ...
168s Unpacking libarmadillo14 (1:14.2.3+dfsg-1) ...
168s Selecting previously unselected package libdav1d7:amd64.
168s Preparing to unpack .../015-libdav1d7_1.5.1-1_amd64.deb ...
168s Unpacking libdav1d7:amd64 (1.5.1-1) ...
168s Selecting previously unselected package libgav1-1:amd64.
168s Preparing to unpack .../016-libgav1-1_0.19.0-3_amd64.deb ...
168s Unpacking libgav1-1:amd64 (0.19.0-3) ...
168s Selecting previously unselected package librav1e0.7:amd64.
168s Preparing to unpack .../017-librav1e0.7_0.7.1-9_amd64.deb ...
168s Unpacking librav1e0.7:amd64 (0.7.1-9) ...
168s Selecting previously unselected package libsvtav1enc2:amd64.
168s Preparing to unpack .../018-libsvtav1enc2_2.3.0+dfsg-1_amd64.deb ...
168s Unpacking libsvtav1enc2:amd64 (2.3.0+dfsg-1) ...
168s Selecting previously unselected package libjpeg-turbo8:amd64.
168s Preparing to unpack .../019-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ...
168s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ...
168s Selecting previously unselected package libjpeg8:amd64.
168s Preparing to unpack .../020-libjpeg8_8c-2ubuntu11_amd64.deb ...
168s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ...
168s Selecting previously unselected package libyuv0:amd64.
168s Preparing to unpack .../021-libyuv0_0.0.1904.20250204-1_amd64.deb ...
168s Unpacking libyuv0:amd64 (0.0.1904.20250204-1) ...
168s Selecting previously unselected package libavif16:amd64.
168s Preparing to unpack .../022-libavif16_1.2.0-1ubuntu1_amd64.deb ...
168s Unpacking libavif16:amd64 (1.2.0-1ubuntu1) ...
168s Selecting previously unselected package libsnappy1v5:amd64.
168s Preparing to unpack .../023-libsnappy1v5_1.2.1-1_amd64.deb ...
168s Unpacking libsnappy1v5:amd64 (1.2.1-1) ...
168s Selecting previously unselected package libblosc1:amd64.
168s Preparing to unpack .../024-libblosc1_1.21.5+ds-1build1_amd64.deb ...
168s Unpacking libblosc1:amd64 (1.21.5+ds-1build1) ...
168s Selecting previously unselected package libpixman-1-0:amd64.
168s Preparing to unpack .../025-libpixman-1-0_0.44.0-3_amd64.deb ...
168s Unpacking libpixman-1-0:amd64 (0.44.0-3) ...
168s Selecting previously unselected package libxcb-render0:amd64.
168s Preparing to unpack .../026-libxcb-render0_1.17.0-2_amd64.deb ...
168s Unpacking libxcb-render0:amd64 (1.17.0-2) ...
168s Selecting previously unselected package libxcb-shm0:amd64.
168s Preparing to unpack .../027-libxcb-shm0_1.17.0-2_amd64.deb ...
168s Unpacking libxcb-shm0:amd64 (1.17.0-2) ...
168s Selecting previously unselected package libxrender1:amd64.
168s Preparing to unpack .../028-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ...
168s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ...
168s Selecting previously unselected package libcairo2:amd64.
168s Preparing to unpack .../029-libcairo2_1.18.2-2_amd64.deb ...
168s Unpacking libcairo2:amd64 (1.18.2-2) ...
168s Selecting previously unselected package libcfitsio10t64:amd64.
168s Preparing to unpack .../030-libcfitsio10t64_4.5.0-5_amd64.deb ...
168s Unpacking libcfitsio10t64:amd64 (4.5.0-5) ...
168s Selecting previously unselected package libdatrie1:amd64.
168s Preparing to unpack .../031-libdatrie1_0.2.13-3build1_amd64.deb ...
168s Unpacking libdatrie1:amd64 (0.2.13-3build1) ...
168s Selecting previously unselected package libde265-0:amd64.
168s Preparing to unpack .../032-libde265-0_1.0.15-1build5_amd64.deb ...
168s Unpacking libde265-0:amd64 (1.0.15-1build5) ...
168s Selecting previously unselected package libdeflate0:amd64.
168s Preparing to unpack .../033-libdeflate0_1.23-1_amd64.deb ...
168s Unpacking libdeflate0:amd64 (1.23-1) ...
168s Selecting previously unselected package libfyba0t64:amd64.
168s Preparing to unpack .../034-libfyba0t64_4.1.1-11build1_amd64.deb ...
168s Unpacking libfyba0t64:amd64 (4.1.1-11build1) ...
168s Selecting previously unselected package libminizip1t64:amd64.
168s Preparing to unpack .../035-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ...
168s Unpacking libminizip1t64:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
168s Selecting previously unselected package libfreexl1:amd64.
168s Preparing to unpack .../036-libfreexl1_2.0.0-1build2_amd64.deb ...
168s Unpacking libfreexl1:amd64 (2.0.0-1build2) ...
168s Selecting previously unselected package libgeos3.13.1:amd64.
168s Preparing to unpack .../037-libgeos3.13.1_3.13.1-1_amd64.deb ...
168s Unpacking libgeos3.13.1:amd64 (3.13.1-1) ...
168s Selecting previously unselected package libgeos-c1t64:amd64.
168s Preparing to unpack .../038-libgeos-c1t64_3.13.1-1_amd64.deb ...
168s Unpacking libgeos-c1t64:amd64 (3.13.1-1) ...
168s Selecting previously unselected package proj-data.
168s Preparing to unpack .../039-proj-data_9.5.1-1_all.deb ...
168s Unpacking proj-data (9.5.1-1) ...
169s Selecting previously unselected package libjbig0:amd64.
169s Preparing to unpack .../040-libjbig0_2.1-6.1ubuntu2_amd64.deb ...
169s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ...
169s Selecting previously unselected package liblerc4:amd64.
169s Preparing to unpack .../041-liblerc4_4.0.0+ds-5ubuntu1_amd64.deb ...
169s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu1) ...
169s Selecting previously unselected package libsharpyuv0:amd64.
169s Preparing to unpack .../042-libsharpyuv0_1.5.0-0.1_amd64.deb ...
169s Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ...
169s Selecting previously unselected package libwebp7:amd64.
169s Preparing to unpack .../043-libwebp7_1.5.0-0.1_amd64.deb ...
169s Unpacking libwebp7:amd64 (1.5.0-0.1) ...
169s Selecting previously unselected package libtiff6:amd64.
169s Preparing to unpack .../044-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ...
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169s Selecting previously unselected package libproj25:amd64.
169s Preparing to unpack .../045-libproj25_9.5.1-1_amd64.deb ...
169s Unpacking libproj25:amd64 (9.5.1-1) ...
169s Selecting previously unselected package libgeotiff5:amd64.
169s Preparing to unpack .../046-libgeotiff5_1.7.4-1_amd64.deb ...
169s Unpacking libgeotiff5:amd64 (1.7.4-1) ...
169s Selecting previously unselected package libgif7:amd64.
169s Preparing to unpack .../047-libgif7_5.2.2-1ubuntu2_amd64.deb ...
169s Unpacking libgif7:amd64 (5.2.2-1ubuntu2) ...
169s Selecting previously unselected package libsz2:amd64.
169s Preparing to unpack .../048-libsz2_1.1.3-1_amd64.deb ...
169s Unpacking libsz2:amd64 (1.1.3-1) ...
169s Selecting previously unselected package libhdf4-0-alt:amd64.
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169s Unpacking libhdf4-0-alt:amd64 (4.3.0-1) ...
169s Selecting previously unselected package libhdf5-310:amd64.
169s Preparing to unpack .../050-libhdf5-310_1.14.5+repack-3_amd64.deb ...
169s Unpacking libhdf5-310:amd64 (1.14.5+repack-3) ...
169s Selecting previously unselected package libheif-plugin-aomdec:amd64.
169s Preparing to unpack .../051-libheif-plugin-aomdec_1.19.7-1_amd64.deb ...
169s Unpacking libheif-plugin-aomdec:amd64 (1.19.7-1) ...
169s Selecting previously unselected package libheif-plugin-libde265:amd64.
169s Preparing to unpack .../052-libheif-plugin-libde265_1.19.7-1_amd64.deb ...
169s Unpacking libheif-plugin-libde265:amd64 (1.19.7-1) ...
169s Selecting previously unselected package libheif1:amd64.
169s Preparing to unpack .../053-libheif1_1.19.7-1_amd64.deb ...
169s Unpacking libheif1:amd64 (1.19.7-1) ...
169s Selecting previously unselected package liburiparser1:amd64.
169s Preparing to unpack .../054-liburiparser1_0.9.8+dfsg-2_amd64.deb ...
169s Unpacking liburiparser1:amd64 (0.9.8+dfsg-2) ...
169s Selecting previously unselected package libkmlbase1t64:amd64.
169s Preparing to unpack .../055-libkmlbase1t64_1.3.0-12build1_amd64.deb ...
169s Unpacking libkmlbase1t64:amd64 (1.3.0-12build1) ...
169s Selecting previously unselected package libkmldom1t64:amd64.
169s Preparing to unpack .../056-libkmldom1t64_1.3.0-12build1_amd64.deb ...
169s Unpacking libkmldom1t64:amd64 (1.3.0-12build1) ...
169s Selecting previously unselected package libkmlengine1t64:amd64.
169s Preparing to unpack .../057-libkmlengine1t64_1.3.0-12build1_amd64.deb ...
169s Unpacking libkmlengine1t64:amd64 (1.3.0-12build1) ...
169s Selecting previously unselected package mysql-common.
169s Preparing to unpack .../058-mysql-common_5.8+1.1.1ubuntu1_all.deb ...
169s Unpacking mysql-common (5.8+1.1.1ubuntu1) ...
169s Selecting previously unselected package libmysqlclient24:amd64.
169s Preparing to unpack .../059-libmysqlclient24_8.4.4-0ubuntu2_amd64.deb ...
169s Unpacking libmysqlclient24:amd64 (8.4.4-0ubuntu2) ...
169s Selecting previously unselected package libhdf5-hl-310:amd64.
169s Preparing to unpack .../060-libhdf5-hl-310_1.14.5+repack-3_amd64.deb ...
169s Unpacking libhdf5-hl-310:amd64 (1.14.5+repack-3) ...
169s Selecting previously unselected package libnetcdf22:amd64.
169s Preparing to unpack .../061-libnetcdf22_1%3a4.9.3-1_amd64.deb ...
169s Unpacking libnetcdf22:amd64 (1:4.9.3-1) ...
169s Selecting previously unselected package libltdl7:amd64.
169s Preparing to unpack .../062-libltdl7_2.5.4-4_amd64.deb ...
169s Unpacking libltdl7:amd64 (2.5.4-4) ...
169s Selecting previously unselected package libodbc2:amd64.
169s Preparing to unpack .../063-libodbc2_2.3.12-2ubuntu1_amd64.deb ...
169s Unpacking libodbc2:amd64 (2.3.12-2ubuntu1) ...
169s Selecting previously unselected package unixodbc-common.
169s Preparing to unpack .../064-unixodbc-common_2.3.12-2ubuntu1_all.deb ...
169s Unpacking unixodbc-common (2.3.12-2ubuntu1) ...
169s Selecting previously unselected package libodbcinst2:amd64.
169s Preparing to unpack .../065-libodbcinst2_2.3.12-2ubuntu1_amd64.deb ...
169s Unpacking libodbcinst2:amd64 (2.3.12-2ubuntu1) ...
169s Selecting previously unselected package libogdi4.1:amd64.
169s Preparing to unpack .../066-libogdi4.1_4.1.1+ds-5_amd64.deb ...
169s Unpacking libogdi4.1:amd64 (4.1.1+ds-5) ...
169s Selecting previously unselected package libopenjp2-7:amd64.
170s Preparing to unpack .../067-libopenjp2-7_2.5.3-2_amd64.deb ...
170s Unpacking libopenjp2-7:amd64 (2.5.3-2) ...
170s Selecting previously unselected package libgpgmepp6t64:amd64.
170s Preparing to unpack .../068-libgpgmepp6t64_1.24.2-1ubuntu2_amd64.deb ...
170s Unpacking libgpgmepp6t64:amd64 (1.24.2-1ubuntu2) ...
170s Selecting previously unselected package liblcms2-2:amd64.
170s Preparing to unpack .../069-liblcms2-2_2.16-2_amd64.deb ...
170s Unpacking liblcms2-2:amd64 (2.16-2) ...
170s Selecting previously unselected package libpoppler147:amd64.
170s Preparing to unpack .../070-libpoppler147_25.03.0-2_amd64.deb ...
170s Unpacking libpoppler147:amd64 (25.03.0-2) ...
170s Selecting previously unselected package libpq5:amd64.
170s Preparing to unpack .../071-libpq5_17.4-1_amd64.deb ...
170s Unpacking libpq5:amd64 (17.4-1) ...
170s Selecting previously unselected package libqhull-r8.0:amd64.
170s Preparing to unpack .../072-libqhull-r8.0_2020.2-6build1_amd64.deb ...
170s Unpacking libqhull-r8.0:amd64 (2020.2-6build1) ...
170s Selecting previously unselected package librttopo1:amd64.
170s Preparing to unpack .../073-librttopo1_1.1.0-4_amd64.deb ...
170s Unpacking librttopo1:amd64 (1.1.0-4) ...
170s Selecting previously unselected package libspatialite8t64:amd64.
170s Preparing to unpack .../074-libspatialite8t64_5.1.0-3build1_amd64.deb ...
170s Unpacking libspatialite8t64:amd64 (5.1.0-3build1) ...
170s Selecting previously unselected package libxerces-c3.2t64:amd64.
170s Preparing to unpack .../075-libxerces-c3.2t64_3.2.4+debian-1.3build1_amd64.deb ...
170s Unpacking libxerces-c3.2t64:amd64 (3.2.4+debian-1.3build1) ...
170s Selecting previously unselected package libgdal36:amd64.
170s Preparing to unpack .../076-libgdal36_3.10.2+dfsg-1build3_amd64.deb ...
170s Unpacking libgdal36:amd64 (3.10.2+dfsg-1build3) ...
170s Selecting previously unselected package libgomp1:amd64.
170s Preparing to unpack .../077-libgomp1_15-20250222-0ubuntu1_amd64.deb ...
170s Unpacking libgomp1:amd64 (15-20250222-0ubuntu1) ...
170s Selecting previously unselected package libgraphite2-3:amd64.
170s Preparing to unpack .../078-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ...
170s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ...
170s Selecting previously unselected package libharfbuzz0b:amd64.
170s Preparing to unpack .../079-libharfbuzz0b_10.2.0-1_amd64.deb ...
170s Unpacking libharfbuzz0b:amd64 (10.2.0-1) ...
170s Selecting previously unselected package x11-common.
170s Preparing to unpack .../080-x11-common_1%3a7.7+23ubuntu3_all.deb ...
170s Unpacking x11-common (1:7.7+23ubuntu3) ...
170s Selecting previously unselected package libice6:amd64.
170s Preparing to unpack .../081-libice6_2%3a1.1.1-1_amd64.deb ...
170s Unpacking libice6:amd64 (2:1.1.1-1) ...
170s Selecting previously unselected package libthai-data.
170s Preparing to unpack .../082-libthai-data_0.1.29-2build1_all.deb ...
170s Unpacking libthai-data (0.1.29-2build1) ...
170s Selecting previously unselected package libthai0:amd64.
170s Preparing to unpack .../083-libthai0_0.1.29-2build1_amd64.deb ...
170s Unpacking libthai0:amd64 (0.1.29-2build1) ...
170s Selecting previously unselected package libpango-1.0-0:amd64.
170s Preparing to unpack .../084-libpango-1.0-0_1.56.2-1_amd64.deb ...
170s Unpacking libpango-1.0-0:amd64 (1.56.2-1) ...
170s Selecting previously unselected package libpangoft2-1.0-0:amd64.
170s Preparing to unpack .../085-libpangoft2-1.0-0_1.56.2-1_amd64.deb ...
170s Unpacking libpangoft2-1.0-0:amd64 (1.56.2-1) ...
170s Selecting previously unselected package libpangocairo-1.0-0:amd64.
170s Preparing to unpack .../086-libpangocairo-1.0-0_1.56.2-1_amd64.deb ...
170s Unpacking libpangocairo-1.0-0:amd64 (1.56.2-1) ...
170s Selecting previously unselected package libpaper2:amd64.
170s Preparing to unpack .../087-libpaper2_2.2.5-0.3_amd64.deb ...
170s Unpacking libpaper2:amd64 (2.2.5-0.3) ...
170s Selecting previously unselected package libpaper-utils.
170s Preparing to unpack .../088-libpaper-utils_2.2.5-0.3_amd64.deb ...
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170s Selecting previously unselected package libsm6:amd64.
170s Preparing to unpack .../089-libsm6_2%3a1.2.4-1_amd64.deb ...
170s Unpacking libsm6:amd64 (2:1.2.4-1) ...
170s Selecting previously unselected package libtcl8.6:amd64.
170s Preparing to unpack .../090-libtcl8.6_8.6.16+dfsg-1_amd64.deb ...
170s Unpacking libtcl8.6:amd64 (8.6.16+dfsg-1) ...
170s Selecting previously unselected package libxft2:amd64.
170s Preparing to unpack .../091-libxft2_2.3.6-1build1_amd64.deb ...
170s Unpacking libxft2:amd64 (2.3.6-1build1) ...
170s Selecting previously unselected package libxss1:amd64.
170s Preparing to unpack .../092-libxss1_1%3a1.2.3-1build3_amd64.deb ...
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171s Selecting previously unselected package libtk8.6:amd64.
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171s Unpacking libtk8.6:amd64 (8.6.16-1) ...
171s Selecting previously unselected package libxt6t64:amd64.
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171s Selecting previously unselected package zip.
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171s Preparing to unpack .../096-unzip_6.0-28ubuntu6_amd64.deb ...
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171s Selecting previously unselected package xdg-utils.
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171s Selecting previously unselected package r-base-core.
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171s Selecting previously unselected package r-cran-littler.
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171s Selecting previously unselected package r-cran-raster.
172s Preparing to unpack .../107-r-cran-raster_3.6-31-1_amd64.deb ...
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172s Setting up libgraphite2-3:amd64 (1.3.14-2ubuntu1) ...
172s Setting up liblcms2-2:amd64 (2.16-2) ...
172s Setting up libpixman-1-0:amd64 (0.44.0-3) ...
172s Setting up libsharpyuv0:amd64 (1.5.0-0.1) ...
172s Setting up libgpgmepp6t64:amd64 (1.24.2-1ubuntu2) ...
172s Setting up libaom3:amd64 (3.12.0-1) ...
172s Setting up mysql-common (5.8+1.1.1ubuntu1) ...
172s update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode
172s Setting up liblerc4:amd64 (4.0.0+ds-5ubuntu1) ...
172s Setting up proj-data (9.5.1-1) ...
172s Setting up libxrender1:amd64 (1:0.9.10-1.1build1) ...
172s Setting up libdatrie1:amd64 (0.2.13-3build1) ...
172s Setting up libogdi4.1:amd64 (4.1.1+ds-5) ...
172s Setting up libgeos3.13.1:amd64 (3.13.1-1) ...
172s Setting up libxcb-render0:amd64 (1.17.0-2) ...
172s Setting up libgeos-c1t64:amd64 (3.13.1-1) ...
172s Setting up unzip (6.0-28ubuntu6) ...
172s Setting up x11-common (1:7.7+23ubuntu3) ...
172s Setting up libpq5:amd64 (17.4-1) ...
172s Setting up libdeflate0:amd64 (1.23-1) ...
172s Setting up libqhull-r8.0:amd64 (2020.2-6build1) ...
172s Setting up libxcb-shm0:amd64 (1.17.0-2) ...
172s Setting up libxerces-c3.2t64:amd64 (3.2.4+debian-1.3build1) ...
172s Setting up libgomp1:amd64 (15-20250222-0ubuntu1) ...
172s Setting up libmysqlclient24:amd64 (8.4.4-0ubuntu2) ...
172s Setting up libjbig0:amd64 (2.1-6.1ubuntu2) ...
172s Setting up libaec0:amd64 (1.1.3-1) ...
172s Setting up gdal-data (3.10.2+dfsg-1build3) ...
172s Setting up libsnappy1v5:amd64 (1.2.1-1) ...
172s Setting up zip (3.0-14ubuntu2) ...
172s Setting up libblas3:amd64 (3.12.1-2) ...
172s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
172s Setting up libcfitsio10t64:amd64 (4.5.0-5) ...
172s Setting up libsvtav1enc2:amd64 (2.3.0+dfsg-1) ...
172s Setting up fonts-dejavu-mono (2.37-8) ...
172s Setting up libtcl8.6:amd64 (8.6.16+dfsg-1) ...
172s Setting up fonts-dejavu-core (2.37-8) ...
172s Setting up unixodbc-common (2.3.12-2ubuntu1) ...
172s Setting up libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ...
172s Setting up libltdl7:amd64 (2.5.4-4) ...
172s Setting up libgfortran5:amd64 (15-20250222-0ubuntu1) ...
172s Setting up libwebp7:amd64 (1.5.0-0.1) ...
172s Setting up libgif7:amd64 (5.2.2-1ubuntu2) ...
172s Setting up libodbc2:amd64 (2.3.12-2ubuntu1) ...
172s Setting up liburiparser1:amd64 (0.9.8+dfsg-2) ...
172s Setting up libfyba0t64:amd64 (4.1.1-11build1) ...
172s Setting up librttopo1:amd64 (1.1.0-4) ...
172s Setting up libdav1d7:amd64 (1.5.1-1) ...
172s Setting up libminizip1t64:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
172s Setting up librav1e0.7:amd64 (0.7.1-9) ...
172s Setting up libblosc1:amd64 (1.21.5+ds-1build1) ...
172s Setting up libopenjp2-7:amd64 (2.5.3-2) ...
172s Setting up libharfbuzz0b:amd64 (10.2.0-1) ...
172s Setting up libthai-data (0.1.29-2build1) ...
172s Setting up libabsl20230802:amd64 (20230802.1-4.2) ...
172s Setting up libxss1:amd64 (1:1.2.3-1build3) ...
172s Setting up libpaper2:amd64 (2.2.5-0.3) ...
172s Setting up libde265-0:amd64 (1.0.15-1build5) ...
172s Setting up libkmlbase1t64:amd64 (1.3.0-12build1) ...
172s Setting up xdg-utils (1.2.1-2ubuntu1) ...
172s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
172s Setting up libsz2:amd64 (1.1.3-1) ...
172s Setting up gdal-plugins:amd64 (3.10.2+dfsg-1build3) ...
172s Setting up libjpeg8:amd64 (8c-2ubuntu11) ...
172s Setting up libice6:amd64 (2:1.1.1-1) ...
172s Setting up libodbcinst2:amd64 (2.3.12-2ubuntu1) ...
172s Setting up liblapack3:amd64 (3.12.1-2) ...
172s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
172s Setting up libarpack2t64:amd64 (3.9.1-4) ...
172s Setting up fontconfig-config (2.15.0-2ubuntu1) ...
172s Setting up libpaper-utils (2.2.5-0.3) ...
172s Setting up libkmldom1t64:amd64 (1.3.0-12build1) ...
172s Setting up libthai0:amd64 (0.1.29-2build1) ...
172s Setting up libgav1-1:amd64 (0.19.0-3) ...
172s Setting up libhdf4-0-alt:amd64 (4.3.0-1) ...
172s Setting up libhdf5-310:amd64 (1.14.5+repack-3) ...
172s Setting up libfreexl1:amd64 (2.0.0-1build2) ...
172s Setting up libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ...
172s Setting up libarmadillo14 (1:14.2.3+dfsg-1) ...
172s Setting up libfontconfig1:amd64 (2.15.0-2ubuntu1) ...
172s Setting up libyuv0:amd64 (0.0.1904.20250204-1) ...
172s Setting up libsm6:amd64 (2:1.2.4-1) ...
172s Setting up libhdf5-hl-310:amd64 (1.14.5+repack-3) ...
172s Setting up fontconfig (2.15.0-2ubuntu1) ...
174s Regenerating fonts cache... done.
174s Setting up libavif16:amd64 (1.2.0-1ubuntu1) ...
174s Setting up libxft2:amd64 (2.3.6-1build1) ...
174s Setting up libpoppler147:amd64 (25.03.0-2) ...
174s Setting up libproj25:amd64 (9.5.1-1) ...
174s Setting up libtk8.6:amd64 (8.6.16-1) ...
174s Setting up libpango-1.0-0:amd64 (1.56.2-1) ...
174s Setting up libnetcdf22:amd64 (1:4.9.3-1) ...
174s Setting up libkmlengine1t64:amd64 (1.3.0-12build1) ...
174s Setting up libcairo2:amd64 (1.18.2-2) ...
174s Setting up libgeotiff5:amd64 (1.7.4-1) ...
174s Setting up libxt6t64:amd64 (1:1.2.1-1.2build1) ...
174s Setting up libpangoft2-1.0-0:amd64 (1.56.2-1) ...
174s Setting up libpangocairo-1.0-0:amd64 (1.56.2-1) ...
174s Setting up libspatialite8t64:amd64 (5.1.0-3build1) ...
174s Setting up r-base-core (4.4.3-1) ...
175s Creating config file /etc/R/Renviron with new version
175s Setting up r-cran-lattice (0.22-6-1) ...
175s Setting up r-cran-pkgkitten (0.2.4-1) ...
175s Setting up r-cran-littler (0.3.20-2) ...
175s Setting up r-cran-rcpp (1.0.14-1) ...
175s Setting up littler (0.3.20-2) ...
175s Setting up r-cran-sp (1:2.2-0+dfsg-1) ...
175s Setting up r-cran-geosphere (1.5-20-1) ...
175s Setting up libheif1:amd64 (1.19.7-1) ...
175s Setting up libgdal36:amd64 (3.10.2+dfsg-1build3) ...
175s Setting up libheif-plugin-aomdec:amd64 (1.19.7-1) ...
175s Setting up libheif-plugin-libde265:amd64 (1.19.7-1) ...
175s Setting up r-cran-terra (1.8-29-1) ...
175s Setting up r-cran-raster (3.6-31-1) ...
175s Processing triggers for install-info (7.1.1-1) ...
175s Processing triggers for libc-bin (2.41-1ubuntu2) ...
175s Processing triggers for man-db (2.13.0-1) ...
177s autopkgtest [22:12:52]: test vignette: [-----------------------
177s BEGIN VIGNETTE vignettes/geosphere.Rnw
178s Loading required namespace: raster
179s code for methods in class “Rcpp_SpatCategories” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
179s code for methods in class “Rcpp_SpatCategories” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
179s code for methods in class “Rcpp_SpatDataFrame” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatDataFrame” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatExtent” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatExtent” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatFactor” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatFactor” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatMessages” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatMessages” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatOptions” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatOptions” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatRaster” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatRaster” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatRasterCollection” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatRasterCollection” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatRasterStack” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatRasterStack” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatSRS” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatSRS” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatTime_v” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatTime_v” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatVector” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatVector” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatVectorCollection” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatVectorCollection” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
180s code for methods in class “Rcpp_SpatVectorProxy” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
181s code for methods in class “Rcpp_SpatVectorProxy” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
182s code for methods in class “Rcpp_SpExtent” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
182s code for methods in class “Rcpp_SpExtent” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
182s code for methods in class “Rcpp_SpPoly” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
182s code for methods in class “Rcpp_SpPoly” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
182s code for methods in class “Rcpp_SpPolyPart” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
182s code for methods in class “Rcpp_SpPolyPart” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
182s code for methods in class “Rcpp_SpPolygons” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
182s code for methods in class “Rcpp_SpPolygons” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
182s Output file:  geosphere.tex
183s autopkgtest [22:12:58]: test vignette: -----------------------]
183s vignette             PASS
183s autopkgtest [22:12:58]: test vignette:  - - - - - - - - - - results - - - - - - - - - -
183s autopkgtest [22:12:58]: test pkg-r-autopkgtest: preparing testbed
183s Reading package lists...
184s Building dependency tree...
184s Reading state information...
184s Starting pkgProblemResolver with broken count: 0
184s Starting 2 pkgProblemResolver with broken count: 0
184s Done
184s The following NEW packages will be installed:
184s   build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu
184s   dctrl-tools g++ g++-14 g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc
184s   gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-14
184s   gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools libasan8
184s   libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev
184s   libgfortran-14-dev libhwasan0 libicu-dev libisl23 libitm1 libjpeg-dev
184s   libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 liblzma-dev libmpc3
184s   libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
184s   libpkgconf3 libpng-dev libquadmath0 libreadline-dev libstdc++-14-dev
184s   libtirpc-dev libtsan2 libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin
184s   r-base-dev zlib1g-dev
185s 0 upgraded, 55 newly installed, 0 to remove and 0 not upgraded.
185s Need to get 103 MB of archives.
185s After this operation, 363 MB of additional disk space will be used.
185s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB]
185s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB]
185s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [11.9 MB]
185s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-17ubuntu3 [1030 B]
185s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [5586 B]
185s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.2.0-1ubuntu1 [22.4 kB]
185s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 15-20250222-0ubuntu1 [47.0 kB]
185s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 15-20250222-0ubuntu1 [28.6 kB]
185s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 15-20250222-0ubuntu1 [3055 kB]
185s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 15-20250222-0ubuntu1 [1355 kB]
185s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 15-20250222-0ubuntu1 [2756 kB]
186s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 15-20250222-0ubuntu1 [1205 kB]
186s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 15-20250222-0ubuntu1 [1677 kB]
186s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 15-20250222-0ubuntu1 [152 kB]
186s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-17ubuntu3 [2816 kB]
186s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [23.3 MB]
186s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-17ubuntu3 [536 kB]
186s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1208 B]
186s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.2.0-1ubuntu1 [5004 B]
186s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-17ubuntu3 [2486 kB]
186s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [13.4 MB]
187s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-17ubuntu3 [21.8 kB]
187s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [968 B]
187s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.2.0-1ubuntu1 [1100 B]
187s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B]
187s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 dctrl-tools amd64 2.24-3build3 [106 kB]
187s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran-14-dev amd64 14.2.0-17ubuntu3 [966 kB]
187s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [12.6 MB]
187s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14 amd64 14.2.0-17ubuntu3 [13.6 kB]
187s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1022 B]
187s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran amd64 4:14.2.0-1ubuntu1 [1174 B]
187s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 icu-devtools amd64 76.1-1ubuntu2 [237 kB]
187s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas-dev amd64 3.12.1-2 [338 kB]
187s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libbz2-dev amd64 1.0.8-6 [33.8 kB]
187s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate-dev amd64 1.23-1 [71.7 kB]
187s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libicu-dev amd64 76.1-1ubuntu2 [12.6 MB]
188s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8-dev amd64 2.1.5-3ubuntu2 [324 kB]
188s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B]
188s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B]
188s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack-dev amd64 3.12.1-2 [6489 kB]
188s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses-dev amd64 6.5+20250216-2 [424 kB]
188s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.45-1 [268 kB]
188s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-32-0 amd64 10.45-1 [251 kB]
188s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-posix3 amd64 10.45-1 [7204 B]
188s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-dev amd64 10.45-1 [908 kB]
188s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libpkgconf3 amd64 1.8.1-4 [32.3 kB]
188s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB]
188s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libpng-dev amd64 1.6.47-1 [298 kB]
188s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libreadline-dev amd64 8.2-6 [184 kB]
188s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma-dev amd64 5.6.4-1 [189 kB]
188s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf-bin amd64 1.8.1-4 [21.6 kB]
188s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf amd64 1.8.1-4 [16.8 kB]
188s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3 [193 kB]
188s Get:54 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-dev all 4.4.3-1 [4176 B]
188s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
188s Fetched 103 MB in 3s (30.9 MB/s)
188s Selecting previously unselected package libisl23:amd64.
188s (Reading database ... 
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(Reading database ... 81134 files and directories currently installed.)
188s Preparing to unpack .../00-libisl23_0.27-1_amd64.deb ...
188s Unpacking libisl23:amd64 (0.27-1) ...
188s Selecting previously unselected package libmpc3:amd64.
188s Preparing to unpack .../01-libmpc3_1.3.1-1build2_amd64.deb ...
188s Unpacking libmpc3:amd64 (1.3.1-1build2) ...
188s Selecting previously unselected package cpp-14-x86-64-linux-gnu.
188s Preparing to unpack .../02-cpp-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ...
188s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ...
189s Selecting previously unselected package cpp-14.
189s Preparing to unpack .../03-cpp-14_14.2.0-17ubuntu3_amd64.deb ...
189s Unpacking cpp-14 (14.2.0-17ubuntu3) ...
189s Selecting previously unselected package cpp-x86-64-linux-gnu.
189s Preparing to unpack .../04-cpp-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ...
189s Unpacking cpp-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ...
189s Selecting previously unselected package cpp.
189s Preparing to unpack .../05-cpp_4%3a14.2.0-1ubuntu1_amd64.deb ...
189s Unpacking cpp (4:14.2.0-1ubuntu1) ...
189s Selecting previously unselected package libcc1-0:amd64.
189s Preparing to unpack .../06-libcc1-0_15-20250222-0ubuntu1_amd64.deb ...
189s Unpacking libcc1-0:amd64 (15-20250222-0ubuntu1) ...
189s Selecting previously unselected package libitm1:amd64.
189s Preparing to unpack .../07-libitm1_15-20250222-0ubuntu1_amd64.deb ...
189s Unpacking libitm1:amd64 (15-20250222-0ubuntu1) ...
189s Selecting previously unselected package libasan8:amd64.
189s Preparing to unpack .../08-libasan8_15-20250222-0ubuntu1_amd64.deb ...
189s Unpacking libasan8:amd64 (15-20250222-0ubuntu1) ...
189s Selecting previously unselected package liblsan0:amd64.
189s Preparing to unpack .../09-liblsan0_15-20250222-0ubuntu1_amd64.deb ...
189s Unpacking liblsan0:amd64 (15-20250222-0ubuntu1) ...
189s Selecting previously unselected package libtsan2:amd64.
189s Preparing to unpack .../10-libtsan2_15-20250222-0ubuntu1_amd64.deb ...
189s Unpacking libtsan2:amd64 (15-20250222-0ubuntu1) ...
189s Selecting previously unselected package libubsan1:amd64.
189s Preparing to unpack .../11-libubsan1_15-20250222-0ubuntu1_amd64.deb ...
189s Unpacking libubsan1:amd64 (15-20250222-0ubuntu1) ...
189s Selecting previously unselected package libhwasan0:amd64.
189s Preparing to unpack .../12-libhwasan0_15-20250222-0ubuntu1_amd64.deb ...
189s Unpacking libhwasan0:amd64 (15-20250222-0ubuntu1) ...
189s Selecting previously unselected package libquadmath0:amd64.
189s Preparing to unpack .../13-libquadmath0_15-20250222-0ubuntu1_amd64.deb ...
189s Unpacking libquadmath0:amd64 (15-20250222-0ubuntu1) ...
189s Selecting previously unselected package libgcc-14-dev:amd64.
189s Preparing to unpack .../14-libgcc-14-dev_14.2.0-17ubuntu3_amd64.deb ...
189s Unpacking libgcc-14-dev:amd64 (14.2.0-17ubuntu3) ...
189s Selecting previously unselected package gcc-14-x86-64-linux-gnu.
189s Preparing to unpack .../15-gcc-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ...
189s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ...
190s Selecting previously unselected package gcc-14.
190s Preparing to unpack .../16-gcc-14_14.2.0-17ubuntu3_amd64.deb ...
190s Unpacking gcc-14 (14.2.0-17ubuntu3) ...
190s Selecting previously unselected package gcc-x86-64-linux-gnu.
190s Preparing to unpack .../17-gcc-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ...
190s Unpacking gcc-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ...
190s Selecting previously unselected package gcc.
190s Preparing to unpack .../18-gcc_4%3a14.2.0-1ubuntu1_amd64.deb ...
190s Unpacking gcc (4:14.2.0-1ubuntu1) ...
190s Selecting previously unselected package libstdc++-14-dev:amd64.
190s Preparing to unpack .../19-libstdc++-14-dev_14.2.0-17ubuntu3_amd64.deb ...
190s Unpacking libstdc++-14-dev:amd64 (14.2.0-17ubuntu3) ...
190s Selecting previously unselected package g++-14-x86-64-linux-gnu.
190s Preparing to unpack .../20-g++-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ...
190s Unpacking g++-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ...
190s Selecting previously unselected package g++-14.
190s Preparing to unpack .../21-g++-14_14.2.0-17ubuntu3_amd64.deb ...
190s Unpacking g++-14 (14.2.0-17ubuntu3) ...
190s Selecting previously unselected package g++-x86-64-linux-gnu.
190s Preparing to unpack .../22-g++-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ...
190s Unpacking g++-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ...
190s Selecting previously unselected package g++.
190s Preparing to unpack .../23-g++_4%3a14.2.0-1ubuntu1_amd64.deb ...
190s Unpacking g++ (4:14.2.0-1ubuntu1) ...
190s Selecting previously unselected package build-essential.
190s Preparing to unpack .../24-build-essential_12.10ubuntu1_amd64.deb ...
190s Unpacking build-essential (12.10ubuntu1) ...
190s Selecting previously unselected package dctrl-tools.
190s Preparing to unpack .../25-dctrl-tools_2.24-3build3_amd64.deb ...
190s Unpacking dctrl-tools (2.24-3build3) ...
190s Selecting previously unselected package libgfortran-14-dev:amd64.
190s Preparing to unpack .../26-libgfortran-14-dev_14.2.0-17ubuntu3_amd64.deb ...
190s Unpacking libgfortran-14-dev:amd64 (14.2.0-17ubuntu3) ...
190s Selecting previously unselected package gfortran-14-x86-64-linux-gnu.
190s Preparing to unpack .../27-gfortran-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ...
190s Unpacking gfortran-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ...
191s Selecting previously unselected package gfortran-14.
191s Preparing to unpack .../28-gfortran-14_14.2.0-17ubuntu3_amd64.deb ...
191s Unpacking gfortran-14 (14.2.0-17ubuntu3) ...
191s Selecting previously unselected package gfortran-x86-64-linux-gnu.
191s Preparing to unpack .../29-gfortran-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ...
191s Unpacking gfortran-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ...
191s Selecting previously unselected package gfortran.
191s Preparing to unpack .../30-gfortran_4%3a14.2.0-1ubuntu1_amd64.deb ...
191s Unpacking gfortran (4:14.2.0-1ubuntu1) ...
191s Selecting previously unselected package icu-devtools.
191s Preparing to unpack .../31-icu-devtools_76.1-1ubuntu2_amd64.deb ...
191s Unpacking icu-devtools (76.1-1ubuntu2) ...
191s Selecting previously unselected package libblas-dev:amd64.
191s Preparing to unpack .../32-libblas-dev_3.12.1-2_amd64.deb ...
191s Unpacking libblas-dev:amd64 (3.12.1-2) ...
191s Selecting previously unselected package libbz2-dev:amd64.
191s Preparing to unpack .../33-libbz2-dev_1.0.8-6_amd64.deb ...
191s Unpacking libbz2-dev:amd64 (1.0.8-6) ...
191s Selecting previously unselected package libdeflate-dev:amd64.
191s Preparing to unpack .../34-libdeflate-dev_1.23-1_amd64.deb ...
191s Unpacking libdeflate-dev:amd64 (1.23-1) ...
191s Selecting previously unselected package libicu-dev:amd64.
191s Preparing to unpack .../35-libicu-dev_76.1-1ubuntu2_amd64.deb ...
191s Unpacking libicu-dev:amd64 (76.1-1ubuntu2) ...
191s Selecting previously unselected package libjpeg-turbo8-dev:amd64.
191s Preparing to unpack .../36-libjpeg-turbo8-dev_2.1.5-3ubuntu2_amd64.deb ...
191s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-3ubuntu2) ...
191s Selecting previously unselected package libjpeg8-dev:amd64.
191s Preparing to unpack .../37-libjpeg8-dev_8c-2ubuntu11_amd64.deb ...
191s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu11) ...
191s Selecting previously unselected package libjpeg-dev:amd64.
191s Preparing to unpack .../38-libjpeg-dev_8c-2ubuntu11_amd64.deb ...
191s Unpacking libjpeg-dev:amd64 (8c-2ubuntu11) ...
191s Selecting previously unselected package liblapack-dev:amd64.
191s Preparing to unpack .../39-liblapack-dev_3.12.1-2_amd64.deb ...
191s Unpacking liblapack-dev:amd64 (3.12.1-2) ...
191s Selecting previously unselected package libncurses-dev:amd64.
191s Preparing to unpack .../40-libncurses-dev_6.5+20250216-2_amd64.deb ...
191s Unpacking libncurses-dev:amd64 (6.5+20250216-2) ...
191s Selecting previously unselected package libpcre2-16-0:amd64.
191s Preparing to unpack .../41-libpcre2-16-0_10.45-1_amd64.deb ...
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192s Selecting previously unselected package libpkgconf3:amd64.
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192s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-3ubuntu2) ...
192s Setting up libncurses-dev:amd64 (6.5+20250216-2) ...
192s Setting up libreadline-dev:amd64 (8.2-6) ...
192s Setting up libpcre2-16-0:amd64 (10.45-1) ...
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192s Setting up libtirpc-dev:amd64 (1.3.4+ds-1.3) ...
192s Setting up libpkgconf3:amd64 (1.8.1-4) ...
192s Setting up libquadmath0:amd64 (15-20250222-0ubuntu1) ...
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192s Setting up pkgconf-bin (1.8.1-4) ...
192s Setting up liblzma-dev:amd64 (5.6.4-1) ...
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192s Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
192s Setting up libpcre2-posix3:amd64 (10.45-1) ...
192s Setting up libhwasan0:amd64 (15-20250222-0ubuntu1) ...
192s Setting up libasan8:amd64 (15-20250222-0ubuntu1) ...
192s Setting up libtsan2:amd64 (15-20250222-0ubuntu1) ...
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192s Setting up libisl23:amd64 (0.27-1) ...
192s Setting up libdeflate-dev:amd64 (1.23-1) ...
192s Setting up libicu-dev:amd64 (76.1-1ubuntu2) ...
192s Setting up libcc1-0:amd64 (15-20250222-0ubuntu1) ...
192s Setting up liblsan0:amd64 (15-20250222-0ubuntu1) ...
192s Setting up libblas-dev:amd64 (3.12.1-2) ...
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192s Setting up dctrl-tools (2.24-3build3) ...
192s Setting up libitm1:amd64 (15-20250222-0ubuntu1) ...
192s Setting up libbz2-dev:amd64 (1.0.8-6) ...
192s Setting up libpcre2-dev:amd64 (10.45-1) ...
192s Setting up libpng-dev:amd64 (1.6.47-1) ...
192s Setting up libjpeg-dev:amd64 (8c-2ubuntu11) ...
192s Setting up pkgconf:amd64 (1.8.1-4) ...
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192s Setting up g++-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ...
192s Setting up g++-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ...
192s Setting up g++-14 (14.2.0-17ubuntu3) ...
192s Setting up gfortran-14 (14.2.0-17ubuntu3) ...
192s Setting up gfortran-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ...
192s Setting up gcc (4:14.2.0-1ubuntu1) ...
192s Setting up g++ (4:14.2.0-1ubuntu1) ...
192s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
192s Setting up build-essential (12.10ubuntu1) ...
192s Setting up gfortran (4:14.2.0-1ubuntu1) ...
192s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
192s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
192s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
192s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
192s Setting up r-base-dev (4.4.3-1) ...
192s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
192s Processing triggers for libc-bin (2.41-1ubuntu2) ...
192s Processing triggers for man-db (2.13.0-1) ...
193s Processing triggers for install-info (7.1.1-1) ...
194s autopkgtest [22:13:09]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
194s autopkgtest [22:13:09]: test pkg-r-autopkgtest: [-----------------------
194s Test: Try to load the R library geosphere
194s 
194s R version 4.4.3 (2025-02-28) -- "Trophy Case"
194s Copyright (C) 2025 The R Foundation for Statistical Computing
194s Platform: x86_64-pc-linux-gnu
194s 
194s R is free software and comes with ABSOLUTELY NO WARRANTY.
194s You are welcome to redistribute it under certain conditions.
194s Type 'license()' or 'licence()' for distribution details.
194s 
194s R is a collaborative project with many contributors.
194s Type 'contributors()' for more information and
194s 'citation()' on how to cite R or R packages in publications.
194s 
194s Type 'demo()' for some demos, 'help()' for on-line help, or
194s 'help.start()' for an HTML browser interface to help.
194s Type 'q()' to quit R.
194s 
194s > library('geosphere')
194s > 
194s > 
194s Other tests are currently unsupported!
194s They will be progressively added.
194s autopkgtest [22:13:09]: test pkg-r-autopkgtest: -----------------------]
195s pkg-r-autopkgtest    PASS
195s autopkgtest [22:13:10]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
195s autopkgtest [22:13:10]: @@@@@@@@@@@@@@@@@@@@ summary
195s vignette             PASS
195s pkg-r-autopkgtest    PASS
212s nova [W] Skipping flock for amd64
212s Creating nova instance adt-plucky-amd64-r-cran-geosphere-20250315-220955-juju-7f2275-prod-proposed-migration-environment-2-dbe19235-9a82-4d89-b08f-3501e11e07f9 from image adt/ubuntu-plucky-amd64-server-20250306.img (UUID 60d877d7-b74c-4f24-920d-f4570db0a338)...
212s nova [W] Timed out waiting for b6cc4f30-4f42-40ab-bae0-d63ec1e0b457 to get deleted.