0s autopkgtest [22:03:25]: starting date and time: 2025-03-15 22:03:25+0000 0s autopkgtest [22:03:25]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [22:03:25]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.qh4vjxjs/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-cran-bio3d --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@lcy02-4.secgroup --name adt-plucky-amd64-r-cran-bio3d-20250315-220324-juju-7f2275-prod-proposed-migration-environment-15-cff45603-3154-4433-be29-802464bf2ae4 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 42s autopkgtest [22:04:07]: testbed dpkg architecture: amd64 42s autopkgtest [22:04:07]: testbed apt version: 2.9.31ubuntu1 43s autopkgtest [22:04:08]: @@@@@@@@@@@@@@@@@@@@ test bed setup 43s autopkgtest [22:04:08]: testbed release detected to be: None 43s autopkgtest [22:04:08]: updating testbed package index (apt update) 43s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 43s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 43s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 43s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 43s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [14.5 kB] 43s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [44.1 kB] 43s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [369 kB] 43s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [85.7 kB] 43s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [67.4 kB] 43s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 c-n-f Metadata [1852 B] 43s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 c-n-f Metadata [116 B] 43s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [174 kB] 43s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [342 kB] 43s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 c-n-f Metadata [15.3 kB] 43s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [16.1 kB] 43s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [8544 B] 43s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 c-n-f Metadata [628 B] 43s Fetched 1265 kB in 0s (6757 kB/s) 44s Reading package lists... 44s + lsb_release --codename --short 44s + RELEASE=plucky 44s + cat 44s + [ plucky != trusty ] 44s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 45s Reading package lists... 45s Building dependency tree... 45s Reading state information... 45s Calculating upgrade... 45s Calculating upgrade... 45s The following package was automatically installed and is no longer required: 45s libnl-genl-3-200 45s Use 'sudo apt autoremove' to remove it. 45s The following NEW packages will be installed: 45s bpftool libdebuginfod-common libdebuginfod1t64 linux-headers-6.14.0-10 45s linux-headers-6.14.0-10-generic linux-image-6.14.0-10-generic 45s linux-modules-6.14.0-10-generic linux-modules-extra-6.14.0-10-generic 45s linux-perf linux-tools-6.14.0-10 linux-tools-6.14.0-10-generic pnp.ids 45s The following packages will be upgraded: 45s apparmor apt apt-utils binutils binutils-common binutils-x86-64-linux-gnu 45s cloud-init cloud-init-base curl dosfstools fwupd gir1.2-girepository-2.0 45s gir1.2-glib-2.0 htop hwdata libapparmor1 libapt-pkg7.0 libaudit-common 45s libaudit1 libbinutils libbrotli1 libcap-ng0 libctf-nobfd0 libctf0 45s libcurl3t64-gnutls libcurl4t64 libestr0 libfwupd3 libgirepository-1.0-1 45s libglib2.0-0t64 libglib2.0-data libgprofng0 libjemalloc2 liblz4-1 liblzma5 45s libmm-glib0 libncurses6 libncursesw6 libnl-3-200 libnl-genl-3-200 45s libnl-route-3-200 libpci3 libpython3-stdlib libpython3.13 45s libpython3.13-minimal libpython3.13-stdlib libselinux1 libsframe1 45s libsqlite3-0 libtinfo6 libxml2 linux-firmware linux-generic 45s linux-headers-generic linux-headers-virtual linux-image-generic 45s linux-image-virtual linux-libc-dev linux-tools-common linux-virtual 45s media-types ncurses-base ncurses-bin ncurses-term pci.ids pciutils 45s pinentry-curses python-apt-common python3 python3-apt python3-cffi-backend 45s python3-dbus python3-gi python3-jinja2 python3-lazr.uri python3-markupsafe 45s python3-minimal python3-systemd python3-yaml python3.13 python3.13-gdbm 45s python3.13-minimal rsync rsyslog strace xz-utils 45s 86 upgraded, 12 newly installed, 0 to remove and 0 not upgraded. 45s Need to get 807 MB of archives. 45s After this operation, 326 MB of additional disk space will be used. 45s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-bin amd64 6.5+20250216-2 [194 kB] 46s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-base all 6.5+20250216-2 [25.9 kB] 46s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-term all 6.5+20250216-2 [276 kB] 46s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 liblz4-1 amd64 1.10.0-4 [66.4 kB] 46s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma5 amd64 5.6.4-1 [157 kB] 46s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libapt-pkg7.0 amd64 2.9.33 [1138 kB] 46s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 apt amd64 2.9.33 [1439 kB] 46s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 apt-utils amd64 2.9.33 [222 kB] 46s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-minimal amd64 3.13.2-2 [27.7 kB] 46s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 python3 amd64 3.13.2-2 [24.0 kB] 46s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13 amd64 3.13.2-2 [2341 kB] 46s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 media-types all 13.0.0 [29.9 kB] 46s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses6 amd64 6.5+20250216-2 [126 kB] 46s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libncursesw6 amd64 6.5+20250216-2 [165 kB] 46s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libtinfo6 amd64 6.5+20250216-2 [119 kB] 46s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libsqlite3-0 amd64 3.46.1-2 [715 kB] 46s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.2-2 [735 kB] 46s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.2-2 [2365 kB] 46s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.2-2 [883 kB] 46s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.2-2 [2066 kB] 46s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.4 kB] 46s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 rsync amd64 3.4.1+ds1-3 [482 kB] 46s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod-common all 0.192-4 [15.4 kB] 46s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit-common all 1:4.0.2-2ubuntu2 [6628 B] 46s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libcap-ng0 amd64 0.8.5-4build1 [15.6 kB] 46s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit1 amd64 1:4.0.2-2ubuntu2 [54.0 kB] 46s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libselinux1 amd64 3.7-3ubuntu3 [87.3 kB] 46s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-girepository-2.0 amd64 1.83.4-1 [25.3 kB] 46s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-glib-2.0 amd64 2.84.0-1 [184 kB] 46s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-0t64 amd64 2.84.0-1 [1669 kB] 46s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libgirepository-1.0-1 amd64 1.83.4-1 [89.5 kB] 46s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libapparmor1 amd64 4.1.0~beta5-0ubuntu8 [55.0 kB] 46s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libestr0 amd64 0.1.11-2 [8340 B] 46s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-data all 2.84.0-1 [53.0 kB] 46s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2ubuntu5 [772 kB] 46s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 python-apt-common all 2.9.9build1 [21.3 kB] 46s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-apt amd64 2.9.9build1 [172 kB] 46s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-cffi-backend amd64 1.17.1-2build2 [96.6 kB] 46s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dbus amd64 1.3.2-5build5 [102 kB] 46s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-4build1 [252 kB] 46s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-yaml amd64 6.0.2-1build2 [144 kB] 46s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 rsyslog amd64 8.2412.0-2ubuntu2 [555 kB] 46s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 apparmor amd64 4.1.0~beta5-0ubuntu8 [701 kB] 46s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 dosfstools amd64 4.2-1.2 [95.0 kB] 46s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-genl-3-200 amd64 3.7.0-1 [12.2 kB] 46s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-route-3-200 amd64 3.7.0-1 [191 kB] 46s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-3-200 amd64 3.7.0-1 [64.9 kB] 46s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 pci.ids all 0.0~2025.03.09-1 [285 kB] 46s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 pciutils amd64 1:3.13.0-2 [110 kB] 46s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libpci3 amd64 1:3.13.0-2 [39.8 kB] 46s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 strace amd64 6.13+ds-1ubuntu1 [622 kB] 46s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 xz-utils amd64 5.6.4-1 [278 kB] 46s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libgprofng0 amd64 2.44-3ubuntu1 [886 kB] 46s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf0 amd64 2.44-3ubuntu1 [96.5 kB] 46s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf-nobfd0 amd64 2.44-3ubuntu1 [98.9 kB] 46s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-x86-64-linux-gnu amd64 2.44-3ubuntu1 [1108 kB] 46s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libbinutils amd64 2.44-3ubuntu1 [585 kB] 46s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils amd64 2.44-3ubuntu1 [208 kB] 46s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-common amd64 2.44-3ubuntu1 [215 kB] 46s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libsframe1 amd64 2.44-3ubuntu1 [14.8 kB] 46s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 hwdata all 0.393-3 [1562 B] 46s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 pnp.ids all 0.393-3 [29.5 kB] 46s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-common all 6.14.0-10.10 [295 kB] 46s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 bpftool amd64 7.6.0+6.14.0-10.10 [1147 kB] 46s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-markupsafe amd64 2.1.5-1build4 [13.4 kB] 46s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 46s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init-base all 25.1-0ubuntu3 [616 kB] 46s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libbrotli1 amd64 1.1.0-2build4 [365 kB] 46s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 curl amd64 8.12.1-3ubuntu1 [258 kB] 46s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4t64 amd64 8.12.1-3ubuntu1 [437 kB] 46s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl3t64-gnutls amd64 8.12.1-3ubuntu1 [432 kB] 46s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 fwupd amd64 2.0.6-4 [5408 kB] 46s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libfwupd3 amd64 2.0.6-4 [136 kB] 46s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libmm-glib0 amd64 1.23.4-0ubuntu3 [251 kB] 46s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 htop amd64 3.4.0-2 [195 kB] 46s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod1t64 amd64 0.192-4 [21.0 kB] 46s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libjemalloc2 amd64 5.3.0-3 [277 kB] 46s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-firmware amd64 20250310.git9e1370d3-0ubuntu1 [571 MB] 53s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-6.14.0-10-generic amd64 6.14.0-10.10 [41.2 MB] 53s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-6.14.0-10-generic amd64 6.14.0-10.10 [15.3 MB] 53s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-extra-6.14.0-10-generic amd64 6.14.0-10.10 [120 MB] 55s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-generic amd64 6.14.0-10.10 [1730 B] 55s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-generic amd64 6.14.0-10.10 [11.1 kB] 55s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-virtual amd64 6.14.0-10.10 [1722 B] 55s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-virtual amd64 6.14.0-10.10 [11.1 kB] 55s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-virtual amd64 6.14.0-10.10 [1642 B] 55s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10 all 6.14.0-10.10 [14.2 MB] 55s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10-generic amd64 6.14.0-10.10 [3915 kB] 55s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-generic amd64 6.14.0-10.10 [11.0 kB] 55s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-libc-dev amd64 6.14.0-10.10 [1723 kB] 55s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-perf amd64 6.14.0-10.10 [4122 kB] 55s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10 amd64 6.14.0-10.10 [1394 kB] 55s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10-generic amd64 6.14.0-10.10 [830 B] 55s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 pinentry-curses amd64 1.3.1-2ubuntu3 [42.3 kB] 55s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lazr.uri all 1.0.6-6 [13.7 kB] 55s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-systemd amd64 235-1build6 [43.9 kB] 55s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-gdbm amd64 3.13.2-2 [31.9 kB] 55s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init all 25.1-0ubuntu3 [2100 B] 55s Preconfiguring packages ... 56s Fetched 807 MB in 9s (85.5 MB/s) 56s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 56s Preparing to unpack .../ncurses-bin_6.5+20250216-2_amd64.deb ... 56s Unpacking ncurses-bin (6.5+20250216-2) over (6.5+20250216-1) ... 56s Setting up ncurses-bin (6.5+20250216-2) ... 56s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 56s Preparing to unpack .../ncurses-base_6.5+20250216-2_all.deb ... 56s Unpacking ncurses-base (6.5+20250216-2) over (6.5+20250216-1) ... 56s Setting up ncurses-base (6.5+20250216-2) ... 56s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 56s Preparing to unpack .../ncurses-term_6.5+20250216-2_all.deb ... 56s Unpacking ncurses-term (6.5+20250216-2) over (6.5+20250216-1) ... 57s Preparing to unpack .../liblz4-1_1.10.0-4_amd64.deb ... 57s Unpacking liblz4-1:amd64 (1.10.0-4) over (1.10.0-3) ... 57s Setting up liblz4-1:amd64 (1.10.0-4) ... 57s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 57s Preparing to unpack .../liblzma5_5.6.4-1_amd64.deb ... 57s Unpacking liblzma5:amd64 (5.6.4-1) over (5.6.3-1) ... 57s Setting up liblzma5:amd64 (5.6.4-1) ... 57s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 57s Preparing to unpack .../libapt-pkg7.0_2.9.33_amd64.deb ... 57s Unpacking libapt-pkg7.0:amd64 (2.9.33) over (2.9.31ubuntu1) ... 57s Setting up libapt-pkg7.0:amd64 (2.9.33) ... 57s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 57s Preparing to unpack .../archives/apt_2.9.33_amd64.deb ... 57s Unpacking apt (2.9.33) over (2.9.31ubuntu1) ... 57s Setting up apt (2.9.33) ... 58s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 58s Preparing to unpack .../apt-utils_2.9.33_amd64.deb ... 58s Unpacking apt-utils (2.9.33) over (2.9.31ubuntu1) ... 58s Preparing to unpack .../python3-minimal_3.13.2-2_amd64.deb ... 58s Unpacking python3-minimal (3.13.2-2) over (3.13.2-1) ... 58s Setting up python3-minimal (3.13.2-2) ... 58s (Reading database ... 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Preparing to unpack .../68-python3-systemd_235-1build6_amd64.deb ... 75s Unpacking python3-systemd (235-1build6) over (235-1build5) ... 75s Preparing to unpack .../69-python3.13-gdbm_3.13.2-2_amd64.deb ... 75s Unpacking python3.13-gdbm (3.13.2-2) over (3.13.2-1) ... 75s Preparing to unpack .../70-cloud-init_25.1-0ubuntu3_all.deb ... 75s Unpacking cloud-init (25.1-0ubuntu3) over (25.1-0ubuntu2) ... 75s Setting up linux-headers-6.14.0-10 (6.14.0-10.10) ... 75s Setting up media-types (13.0.0) ... 75s Installing new version of config file /etc/mime.types ... 75s Setting up linux-headers-6.14.0-10-generic (6.14.0-10.10) ... 75s Setting up libapparmor1:amd64 (4.1.0~beta5-0ubuntu8) ... 75s Setting up pci.ids (0.0~2025.03.09-1) ... 75s Setting up apt-utils (2.9.33) ... 75s Setting up libdebuginfod-common (0.192-4) ... 75s Setting up linux-firmware (20250310.git9e1370d3-0ubuntu1) ... 75s Setting up bpftool (7.6.0+6.14.0-10.10) ... 75s Setting up libestr0:amd64 (0.1.11-2) ... 75s Setting up libbrotli1:amd64 (1.1.0-2build4) ... 75s Setting up libsqlite3-0:amd64 (3.46.1-2) ... 75s Setting up dosfstools (4.2-1.2) ... 75s Setting up rsyslog (8.2412.0-2ubuntu2) ... 75s info: The user `syslog' is already a member of `adm'. 76s Setting up binutils-common:amd64 (2.44-3ubuntu1) ... 76s Setting up libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) ... 76s Setting up linux-libc-dev:amd64 (6.14.0-10.10) ... 76s Setting up libctf-nobfd0:amd64 (2.44-3ubuntu1) ... 76s Setting up linux-headers-generic (6.14.0-10.10) ... 76s Setting up libjemalloc2:amd64 (5.3.0-3) ... 76s Setting up libsframe1:amd64 (2.44-3ubuntu1) ... 76s Setting up libpython3.13-minimal:amd64 (3.13.2-2) ... 76s Setting up apparmor (4.1.0~beta5-0ubuntu8) ... 76s Installing new version of config file /etc/apparmor.d/openvpn ... 77s Reloading AppArmor profiles 78s Setting up libglib2.0-0t64:amd64 (2.84.0-1) ... 78s No schema files found: doing nothing. 78s Setting up libglib2.0-data (2.84.0-1) ... 78s Setting up libncurses6:amd64 (6.5+20250216-2) ... 78s Setting up strace (6.13+ds-1ubuntu1) ... 78s Setting up xz-utils (5.6.4-1) ... 78s Setting up gir1.2-glib-2.0:amd64 (2.84.0-1) ... 78s Setting up linux-modules-6.14.0-10-generic (6.14.0-10.10) ... 81s Setting up libncursesw6:amd64 (6.5+20250216-2) ... 81s Setting up libpci3:amd64 (1:3.13.0-2) ... 81s Setting up python-apt-common (2.9.9build1) ... 81s Setting up libmm-glib0:amd64 (1.23.4-0ubuntu3) ... 81s Setting up pnp.ids (0.393-3) ... 81s Setting up libnl-3-200:amd64 (3.7.0-1) ... 81s Setting up python3.13-minimal (3.13.2-2) ... 81s Setting up libgirepository-1.0-1:amd64 (1.83.4-1) ... 81s Setting up libbinutils:amd64 (2.44-3ubuntu1) ... 81s Setting up libpython3.13-stdlib:amd64 (3.13.2-2) ... 81s Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2ubuntu5) ... 81s Setting up rsync (3.4.1+ds1-3) ... 82s rsync.service is a disabled or a static unit not running, not starting it. 82s Setting up python3.13-gdbm (3.13.2-2) ... 82s Setting up libpython3-stdlib:amd64 (3.13.2-2) ... 82s Setting up ncurses-term (6.5+20250216-2) ... 82s Setting up libctf0:amd64 (2.44-3ubuntu1) ... 82s Setting up libpython3.13:amd64 (3.13.2-2) ... 82s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 82s Setting up libdebuginfod1t64:amd64 (0.192-4) ... 82s Setting up linux-headers-virtual (6.14.0-10.10) ... 82s Setting up libcurl4t64:amd64 (8.12.1-3ubuntu1) ... 82s Setting up python3.13 (3.13.2-2) ... 83s Setting up htop (3.4.0-2) ... 83s Setting up linux-image-6.14.0-10-generic (6.14.0-10.10) ... 85s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.12.0-16-generic 85s I: /boot/initrd.img.old is now a symlink to initrd.img-6.12.0-16-generic 85s I: /boot/vmlinuz is now a symlink to vmlinuz-6.14.0-10-generic 85s I: /boot/initrd.img is now a symlink to initrd.img-6.14.0-10-generic 85s Setting up libfwupd3:amd64 (2.0.6-4) ... 85s Setting up python3 (3.13.2-2) ... 85s Setting up python3-markupsafe (2.1.5-1build4) ... 85s Setting up linux-modules-extra-6.14.0-10-generic (6.14.0-10.10) ... 87s Setting up libnl-route-3-200:amd64 (3.7.0-1) ... 87s Setting up hwdata (0.393-3) ... 87s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 88s Setting up libgprofng0:amd64 (2.44-3ubuntu1) ... 88s Setting up linux-perf (6.14.0-10.10) ... 88s Setting up gir1.2-girepository-2.0:amd64 (1.83.4-1) ... 88s Setting up python3-gi (3.50.0-4build1) ... 88s Setting up pciutils (1:3.13.0-2) ... 88s Setting up libnl-genl-3-200:amd64 (3.7.0-1) ... 88s Setting up curl (8.12.1-3ubuntu1) ... 88s Setting up linux-image-virtual (6.14.0-10.10) ... 88s Setting up linux-tools-common (6.14.0-10.10) ... 88s Setting up fwupd (2.0.6-4) ... 88s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 88s fwupd.service is a disabled or a static unit not running, not starting it. 89s Setting up python3-systemd (235-1build6) ... 89s Setting up python3-cffi-backend:amd64 (1.17.1-2build2) ... 89s Setting up binutils-x86-64-linux-gnu (2.44-3ubuntu1) ... 89s Setting up linux-image-generic (6.14.0-10.10) ... 89s Setting up python3-dbus (1.3.2-5build5) ... 89s Setting up linux-tools-6.14.0-10 (6.14.0-10.10) ... 89s Setting up linux-generic (6.14.0-10.10) ... 89s Setting up python3-apt (2.9.9build1) ... 89s Setting up python3-yaml (6.0.2-1build2) ... 89s Setting up python3-lazr.uri (1.0.6-6) ... 89s Setting up binutils (2.44-3ubuntu1) ... 89s Setting up cloud-init-base (25.1-0ubuntu3) ... 91s Setting up linux-virtual (6.14.0-10.10) ... 91s Setting up linux-tools-6.14.0-10-generic (6.14.0-10.10) ... 91s Setting up cloud-init (25.1-0ubuntu3) ... 91s Processing triggers for systemd (257.3-1ubuntu3) ... 91s Processing triggers for man-db (2.13.0-1) ... 92s Processing triggers for dbus (1.16.2-1ubuntu1) ... 92s Processing triggers for libc-bin (2.41-1ubuntu1) ... 92s Processing triggers for initramfs-tools (0.146ubuntu1) ... 92s update-initramfs: Generating /boot/initrd.img-6.12.0-16-generic 92s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 103s Processing triggers for linux-image-6.14.0-10-generic (6.14.0-10.10) ... 103s /etc/kernel/postinst.d/initramfs-tools: 103s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 103s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 113s /etc/kernel/postinst.d/zz-update-grub: 113s Sourcing file `/etc/default/grub' 113s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 113s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 113s Generating grub configuration file ... 113s Found linux image: /boot/vmlinuz-6.14.0-10-generic 113s Found initrd image: /boot/initrd.img-6.14.0-10-generic 113s Found linux image: /boot/vmlinuz-6.12.0-16-generic 113s Found initrd image: /boot/initrd.img-6.12.0-16-generic 113s Found linux image: /boot/vmlinuz-6.11.0-8-generic 113s Found initrd image: /boot/initrd.img-6.11.0-8-generic 114s Warning: os-prober will not be executed to detect other bootable partitions. 114s Systems on them will not be added to the GRUB boot configuration. 114s Check GRUB_DISABLE_OS_PROBER documentation entry. 114s Adding boot menu entry for UEFI Firmware Settings ... 114s done 114s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 114s + /usr/lib/apt/apt-helper analyze-pattern ?true 114s + uname -r 114s + sed s/\./\\./g 114s + running_kernel_pattern=^linux-.*6\.12\.0-16-generic.* 114s + + tail -n+2 114s + cut -d/ -f1 114s apt list ?obsolete 114s + grep -v ^linux-.*6\.12\.0-16-generic.* 115s + obsolete_pkgs=linux-headers-6.11.0-8-generic 115s linux-headers-6.11.0-8 115s linux-headers-6.12.0-16 115s linux-image-6.11.0-8-generic 115s linux-modules-6.11.0-8-generic 115s linux-tools-6.11.0-8-generic 115s linux-tools-6.11.0-8 115s linux-tools-6.12.0-16 115s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove linux-headers-6.11.0-8-generic linux-headers-6.11.0-8 linux-headers-6.12.0-16 linux-image-6.11.0-8-generic linux-modules-6.11.0-8-generic linux-tools-6.11.0-8-generic linux-tools-6.11.0-8 linux-tools-6.12.0-16 115s Reading package lists... 115s Building dependency tree... 115s Reading state information... 116s Solving dependencies... 116s The following packages will be REMOVED: 116s libnl-genl-3-200* libnsl2* libpython3.12-minimal* libpython3.12-stdlib* 116s libpython3.12t64* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 116s linux-headers-6.12.0-16* linux-headers-6.12.0-16-generic* 116s linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic* 116s linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic* linux-tools-6.12.0-16* 116s linux-tools-6.12.0-16-generic* 116s 0 upgraded, 0 newly installed, 15 to remove and 5 not upgraded. 116s After this operation, 371 MB disk space will be freed. 116s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 148643 files and directories currently installed.) 116s Removing libnl-genl-3-200:amd64 (3.7.0-1) ... 116s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 116s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 116s Removing libpython3.12t64:amd64 (3.12.9-1) ... 116s Removing libpython3.12-stdlib:amd64 (3.12.9-1) ... 116s Removing libnsl2:amd64 (1.3.0-3build3) ... 116s Removing libpython3.12-minimal:amd64 (3.12.9-1) ... 116s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 117s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 119s Removing linux-headers-6.12.0-16-generic (6.12.0-16.16) ... 120s Removing linux-headers-6.12.0-16 (6.12.0-16.16) ... 121s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 122s /etc/kernel/postrm.d/initramfs-tools: 122s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 122s /etc/kernel/postrm.d/zz-update-grub: 122s Sourcing file `/etc/default/grub' 122s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 122s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 122s Generating grub configuration file ... 122s Found linux image: /boot/vmlinuz-6.14.0-10-generic 122s Found initrd image: /boot/initrd.img-6.14.0-10-generic 123s Found linux image: /boot/vmlinuz-6.12.0-16-generic 123s Found initrd image: /boot/initrd.img-6.12.0-16-generic 123s Warning: os-prober will not be executed to detect other bootable partitions. 123s Systems on them will not be added to the GRUB boot configuration. 123s Check GRUB_DISABLE_OS_PROBER documentation entry. 123s Adding boot menu entry for UEFI Firmware Settings ... 123s done 123s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 123s Removing linux-tools-6.12.0-16-generic (6.12.0-16.16) ... 123s Removing linux-tools-6.12.0-16 (6.12.0-16.16) ... 123s Processing triggers for libc-bin (2.41-1ubuntu1) ... 123s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84830 files and directories currently installed.) 123s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 123s Purging configuration files for libpython3.12-minimal:amd64 (3.12.9-1) ... 123s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 123s + grep -q trusty /etc/lsb-release 123s + [ ! -d /usr/share/doc/unattended-upgrades ] 123s + [ ! -d /usr/share/doc/lxd ] 123s + [ ! -d /usr/share/doc/lxd-client ] 123s + [ ! -d /usr/share/doc/snapd ] 123s + type iptables 123s + cat 123s + chmod 755 /etc/rc.local 123s + . /etc/rc.local 123s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 123s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 123s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 123s + uname -m 123s + [ x86_64 = ppc64le ] 123s + [ -d /run/systemd/system ] 123s + systemd-detect-virt --quiet --vm 123s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 123s + cat 123s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 123s + echo COMPRESS=lz4 123s autopkgtest [22:05:28]: upgrading testbed (apt dist-upgrade and autopurge) 123s Reading package lists... 124s Building dependency tree... 124s Reading state information... 124s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 124s Starting 2 pkgProblemResolver with broken count: 0 124s Done 125s Entering ResolveByKeep 125s 125s Calculating upgrade... 125s The following packages will be upgraded: 125s libc-bin libc-dev-bin libc6 libc6-dev locales 125s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 125s Need to get 10.5 MB of archives. 125s After this operation, 1024 B of additional disk space will be used. 125s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6-dev amd64 2.41-1ubuntu2 [2183 kB] 126s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-dev-bin amd64 2.41-1ubuntu2 [24.7 kB] 126s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6 amd64 2.41-1ubuntu2 [3327 kB] 126s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-bin amd64 2.41-1ubuntu2 [700 kB] 126s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 locales all 2.41-1ubuntu2 [4246 kB] 126s Preconfiguring packages ... 127s Fetched 10.5 MB in 1s (12.1 MB/s) 127s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84827 files and directories currently installed.) 127s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_amd64.deb ... 127s Unpacking libc6-dev:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 127s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_amd64.deb ... 127s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 127s Preparing to unpack .../libc6_2.41-1ubuntu2_amd64.deb ... 127s Unpacking libc6:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 127s Setting up libc6:amd64 (2.41-1ubuntu2) ... 127s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84827 files and directories currently installed.) 127s Preparing to unpack .../libc-bin_2.41-1ubuntu2_amd64.deb ... 127s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 127s Setting up libc-bin (2.41-1ubuntu2) ... 128s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84827 files and directories currently installed.) 128s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 128s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 128s Setting up locales (2.41-1ubuntu2) ... 128s Generating locales (this might take a while)... 130s en_US.UTF-8... done 130s Generation complete. 130s Setting up libc-dev-bin (2.41-1ubuntu2) ... 130s Setting up libc6-dev:amd64 (2.41-1ubuntu2) ... 130s Processing triggers for man-db (2.13.0-1) ... 130s Processing triggers for systemd (257.3-1ubuntu3) ... 131s Reading package lists... 131s Building dependency tree... 131s Reading state information... 132s Starting pkgProblemResolver with broken count: 0 132s Starting 2 pkgProblemResolver with broken count: 0 132s Done 132s Solving dependencies... 132s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 132s autopkgtest [22:05:37]: rebooting testbed after setup commands that affected boot 136s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 149s autopkgtest [22:05:54]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 16:07:00 UTC 2025 150s autopkgtest [22:05:55]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-bio3d 151s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-bio3d 2.4-5-1 (dsc) [2285 B] 151s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-bio3d 2.4-5-1 (tar) [1544 kB] 151s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-bio3d 2.4-5-1 (diff) [5468 B] 151s gpgv: Signature made Wed Jan 29 00:14:06 2025 UTC 151s gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 151s gpgv: issuer "plessy@debian.org" 151s gpgv: Can't check signature: No public key 151s dpkg-source: warning: cannot verify inline signature for ./r-cran-bio3d_2.4-5-1.dsc: no acceptable signature found 151s autopkgtest [22:05:56]: testing package r-cran-bio3d version 2.4-5-1 151s autopkgtest [22:05:56]: build not needed 152s autopkgtest [22:05:57]: test run-unit-test: preparing testbed 152s Reading package lists... 153s Building dependency tree... 153s Reading state information... 153s Starting pkgProblemResolver with broken count: 0 153s Starting 2 pkgProblemResolver with broken count: 0 153s Done 154s The following NEW packages will be installed: 154s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 154s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax 154s javascript-common libaec0 libamd3 libasan8 libblas3 libboost-dev 154s libboost1.83-dev libcairo2 libcolamd3 libdatrie1 libdeflate0 libfontconfig1 154s libgcc-14-dev libgfortran5 libglpk40 libgomp1 libgraphite2-3 libharfbuzz0b 154s libhdf5-310 libhdf5-hl-310 libhwasan0 libice6 libitm1 libjbig0 154s libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-bootstrap4 libjs-d3 154s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 154s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax 154s libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify 154s libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack3 liblerc4 154s liblsan0 libltdl7 liblua5.4-0 libnetcdf22 libpango-1.0-0 libpangocairo-1.0-0 154s libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 libquadmath0 154s libsharpyuv0 libsm6 libstdc++-14-dev libsuitesparseconfig7 libsz2 libtcl8.6 154s libthai-data libthai0 libtiff6 libtk8.6 libtsan2 libubsan1 libwebp7 154s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 littler 154s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 154s r-base-core r-bioc-biocgenerics r-bioc-biostrings r-bioc-genomeinfodb 154s r-bioc-genomeinfodbdata r-bioc-iranges r-bioc-s4vectors r-bioc-ucsc.utils 154s r-bioc-xvector r-bioc-zlibbioc r-cran-askpass r-cran-base64enc r-cran-bh 154s r-cran-bigmemory r-cran-bigmemory.sri r-cran-bio3d r-cran-bitops r-cran-brio 154s r-cran-bslib r-cran-cachem r-cran-callr r-cran-cli r-cran-commonmark 154s r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-desc r-cran-diffobj 154s r-cran-digest r-cran-evaluate r-cran-fastmap r-cran-fontawesome r-cran-fs 154s r-cran-glue r-cran-highr r-cran-htmltools r-cran-httpuv r-cran-httr 154s r-cran-igraph r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-later 154s r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-matrix 154s r-cran-memoise r-cran-mime r-cran-ncdf4 r-cran-openssl r-cran-pkgbuild 154s r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-praise 154s r-cran-processx r-cran-promises r-cran-ps r-cran-r6 r-cran-rappdirs 154s r-cran-rcpp r-cran-rcurl r-cran-rlang r-cran-rmarkdown r-cran-rprojroot 154s r-cran-sass r-cran-shiny r-cran-sourcetools r-cran-sys r-cran-testthat 154s r-cran-tinytex r-cran-uuid r-cran-vctrs r-cran-waldo r-cran-withr 154s r-cran-xfun r-cran-xml r-cran-xtable r-cran-yaml unzip x11-common xdg-utils 154s zip zlib1g-dev 154s 0 upgraded, 174 newly installed, 0 to remove and 0 not upgraded. 154s Need to get 193 MB of archives. 154s After this operation, 735 MB of additional disk space will be used. 154s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 154s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 154s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-2ubuntu1 [37.4 kB] 154s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-2ubuntu1 [164 kB] 154s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-2ubuntu1 [180 kB] 154s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 154s Get:7 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 154s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 154s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 12 [5216 B] 154s Get:10 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 154s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 15-20250222-0ubuntu1 [148 kB] 154s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libsuitesparseconfig7 amd64 1:7.8.3+dfsg-3 [13.5 kB] 154s Get:13 http://ftpmaster.internal/ubuntu plucky/universe amd64 libamd3 amd64 1:7.8.3+dfsg-3 [31.0 kB] 154s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 15-20250222-0ubuntu1 [3055 kB] 154s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 154s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 15-20250222-0ubuntu1 [28.6 kB] 154s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 15-20250222-0ubuntu1 [1355 kB] 154s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 15-20250222-0ubuntu1 [2756 kB] 154s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 15-20250222-0ubuntu1 [1205 kB] 154s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 15-20250222-0ubuntu1 [1677 kB] 154s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 15-20250222-0ubuntu1 [152 kB] 154s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-17ubuntu3 [2816 kB] 154s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-17ubuntu3 [2486 kB] 154s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost1.83-dev amd64 1.83.0-4.1ubuntu2 [10.7 MB] 154s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost-dev amd64 1.83.0.2ubuntu1 [4468 B] 154s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 154s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 154s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 154s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 154s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 154s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libcolamd3 amd64 1:7.8.3+dfsg-3 [19.5 kB] 154s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 154s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB] 154s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 15-20250222-0ubuntu1 [919 kB] 154s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl7 amd64 2.5.4-4 [46.5 kB] 154s Get:36 http://ftpmaster.internal/ubuntu plucky/universe amd64 libglpk40 amd64 5.0-1build2 [369 kB] 154s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 154s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB] 154s Get:39 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 154s Get:40 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-310 amd64 1.14.5+repack-3 [1519 kB] 154s Get:41 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-310 amd64 1.14.5+repack-3 [62.6 kB] 154s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 154s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 154s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 154s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 154s Get:46 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 154s Get:47 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 154s Get:48 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 154s Get:49 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 154s Get:50 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 154s Get:51 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 154s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 154s Get:53 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 154s Get:54 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 154s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 154s Get:56 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 154s Get:57 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 154s Get:58 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 154s Get:59 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 154s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 154s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 154s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 liblua5.4-0 amd64 5.4.7-1 [196 kB] 154s Get:63 http://ftpmaster.internal/ubuntu plucky/universe amd64 libnetcdf22 amd64 1:4.9.3-1 [574 kB] 154s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 154s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 154s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.56.2-1 [255 kB] 154s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.56.2-1 [52.6 kB] 154s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.56.2-1 [29.1 kB] 154s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB] 154s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB] 154s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 154s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 154s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB] 154s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 154s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 154s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 154s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 154s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 154s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB] 154s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 154s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu2 [185 kB] 154s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 154s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 154s Get:84 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.3-1 [28.9 MB] 154s Get:85 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-2 [96.6 kB] 154s Get:86 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-2 [2554 B] 154s Get:87 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 154s Get:88 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 154s Get:89 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 154s Get:90 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 154s Get:91 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc amd64 3.1.11.1+ds-2 [27.2 MB] 154s Get:92 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 154s Get:93 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2065 kB] 154s Get:94 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-iranges amd64 2.40.1-2 [2310 kB] 154s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 154s Get:96 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 154s Get:97 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-xvector amd64 0.46.0-2 [620 kB] 154s Get:98 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-curl amd64 6.2.1+dfsg-1ubuntu1 [197 kB] 154s Get:99 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB] 154s Get:100 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 154s Get:101 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB] 154s Get:102 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB] 154s Get:103 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-openssl amd64 2.3.2+dfsg-1 [407 kB] 154s Get:104 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB] 154s Get:105 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 154s Get:106 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 154s Get:107 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 155s Get:108 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 155s Get:109 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB] 155s Get:110 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biostrings amd64 2.74.1+dfsg-2 [13.3 MB] 155s Get:111 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 155s Get:112 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bh all 1.84.0-1 [5962 B] 155s Get:113 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bigmemory.sri all 0.1.8-1 [13.4 kB] 155s Get:114 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 155s Get:115 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.14-1 [1998 kB] 155s Get:116 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-uuid amd64 1.2-1-1 [48.5 kB] 155s Get:117 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bigmemory amd64 4.6.4-1ubuntu1 [499 kB] 155s Get:118 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bio3d amd64 2.4-5-1 [3028 kB] 155s Get:119 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bitops amd64 1.0-9-1 [30.3 kB] 155s Get:120 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 155s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.5-1 [1719 kB] 155s Get:122 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 155s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 155s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB] 155s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 155s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 155s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB] 155s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 155s Get:129 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 155s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 155s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB] 155s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 155s Get:133 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 155s Get:134 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 155s Get:135 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ps amd64 1.9.0-1 [408 kB] 155s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-processx amd64 3.8.6-1 [365 kB] 155s Get:137 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 155s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.2-2 [137 kB] 155s Get:139 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cpp11 all 0.5.2-1 [233 kB] 155s Get:140 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 155s Get:141 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 155s Get:142 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 1.0.3-1 [114 kB] 155s Get:143 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 155s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xfun amd64 0.51+dfsg-1 [574 kB] 155s Get:145 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 155s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB] 155s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 155s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB] 155s Get:149 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 155s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 155s Get:151 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrix amd64 1.7-3-1 [4349 kB] 155s Get:152 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 155s Get:153 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 155s Get:154 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-igraph amd64 2.1.4-1 [5357 kB] 155s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB] 155s Get:156 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 155s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 155s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ncdf4 amd64 1.23-1build1 [279 kB] 155s Get:159 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgbuild all 1.4.6-1 [213 kB] 155s Get:160 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rprojroot all 2.0.4-2 [125 kB] 155s Get:161 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 155s Get:162 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgload all 1.4.0-1 [247 kB] 155s Get:163 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 155s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcurl amd64 1.98-1.16+dfsg-1 [807 kB] 155s Get:165 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tinytex all 0.56-1 [148 kB] 155s Get:166 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-modernizr all 3.13.0-0.1 [101 kB] 155s Get:167 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 155s Get:168 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 155s Get:169 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 155s Get:170 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 155s Get:171 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 155s Get:172 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-waldo all 0.6.1-2 [150 kB] 155s Get:173 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-testthat amd64 3.2.3-1 [1651 kB] 155s Get:174 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xml amd64 3.99-0.18-1 [1748 kB] 155s Preconfiguring packages ... 156s Fetched 193 MB in 1s (133 MB/s) 156s Selecting previously unselected package fonts-dejavu-mono. 156s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84827 files and directories currently installed.) 156s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8_all.deb ... 156s Unpacking fonts-dejavu-mono (2.37-8) ... 156s Selecting previously unselected package fonts-dejavu-core. 156s Preparing to unpack .../001-fonts-dejavu-core_2.37-8_all.deb ... 156s Unpacking fonts-dejavu-core (2.37-8) ... 156s Selecting previously unselected package fontconfig-config. 156s Preparing to unpack .../002-fontconfig-config_2.15.0-2ubuntu1_amd64.deb ... 156s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 156s Selecting previously unselected package libfontconfig1:amd64. 156s Preparing to unpack .../003-libfontconfig1_2.15.0-2ubuntu1_amd64.deb ... 156s Unpacking libfontconfig1:amd64 (2.15.0-2ubuntu1) ... 156s Selecting previously unselected package fontconfig. 156s Preparing to unpack .../004-fontconfig_2.15.0-2ubuntu1_amd64.deb ... 156s Unpacking fontconfig (2.15.0-2ubuntu1) ... 156s Selecting previously unselected package fonts-font-awesome. 156s Preparing to unpack .../005-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 156s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 156s Selecting previously unselected package fonts-glyphicons-halflings. 156s Preparing to unpack .../006-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 156s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 156s Selecting previously unselected package fonts-mathjax. 156s Preparing to unpack .../007-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 156s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 156s Selecting previously unselected package javascript-common. 156s Preparing to unpack .../008-javascript-common_12_all.deb ... 156s Unpacking javascript-common (12) ... 156s Selecting previously unselected package libaec0:amd64. 156s Preparing to unpack .../009-libaec0_1.1.3-1_amd64.deb ... 156s Unpacking libaec0:amd64 (1.1.3-1) ... 156s Selecting previously unselected package libgomp1:amd64. 157s Preparing to unpack .../010-libgomp1_15-20250222-0ubuntu1_amd64.deb ... 157s Unpacking libgomp1:amd64 (15-20250222-0ubuntu1) ... 157s Selecting previously unselected package libsuitesparseconfig7:amd64. 157s Preparing to unpack .../011-libsuitesparseconfig7_1%3a7.8.3+dfsg-3_amd64.deb ... 157s Unpacking libsuitesparseconfig7:amd64 (1:7.8.3+dfsg-3) ... 157s Selecting previously unselected package libamd3:amd64. 157s Preparing to unpack .../012-libamd3_1%3a7.8.3+dfsg-3_amd64.deb ... 157s Unpacking libamd3:amd64 (1:7.8.3+dfsg-3) ... 157s Selecting previously unselected package libasan8:amd64. 157s Preparing to unpack .../013-libasan8_15-20250222-0ubuntu1_amd64.deb ... 157s Unpacking libasan8:amd64 (15-20250222-0ubuntu1) ... 157s Selecting previously unselected package libblas3:amd64. 157s Preparing to unpack .../014-libblas3_3.12.1-2_amd64.deb ... 157s Unpacking libblas3:amd64 (3.12.1-2) ... 157s Selecting previously unselected package libitm1:amd64. 157s Preparing to unpack .../015-libitm1_15-20250222-0ubuntu1_amd64.deb ... 157s Unpacking libitm1:amd64 (15-20250222-0ubuntu1) ... 157s Selecting previously unselected package liblsan0:amd64. 157s Preparing to unpack .../016-liblsan0_15-20250222-0ubuntu1_amd64.deb ... 157s Unpacking liblsan0:amd64 (15-20250222-0ubuntu1) ... 157s Selecting previously unselected package libtsan2:amd64. 157s Preparing to unpack .../017-libtsan2_15-20250222-0ubuntu1_amd64.deb ... 157s Unpacking libtsan2:amd64 (15-20250222-0ubuntu1) ... 157s Selecting previously unselected package libubsan1:amd64. 157s Preparing to unpack .../018-libubsan1_15-20250222-0ubuntu1_amd64.deb ... 157s Unpacking libubsan1:amd64 (15-20250222-0ubuntu1) ... 157s Selecting previously unselected package libhwasan0:amd64. 157s Preparing to unpack .../019-libhwasan0_15-20250222-0ubuntu1_amd64.deb ... 157s Unpacking libhwasan0:amd64 (15-20250222-0ubuntu1) ... 157s Selecting previously unselected package libquadmath0:amd64. 157s Preparing to unpack .../020-libquadmath0_15-20250222-0ubuntu1_amd64.deb ... 157s Unpacking libquadmath0:amd64 (15-20250222-0ubuntu1) ... 157s Selecting previously unselected package libgcc-14-dev:amd64. 157s Preparing to unpack .../021-libgcc-14-dev_14.2.0-17ubuntu3_amd64.deb ... 157s Unpacking libgcc-14-dev:amd64 (14.2.0-17ubuntu3) ... 157s Selecting previously unselected package libstdc++-14-dev:amd64. 157s Preparing to unpack .../022-libstdc++-14-dev_14.2.0-17ubuntu3_amd64.deb ... 157s Unpacking libstdc++-14-dev:amd64 (14.2.0-17ubuntu3) ... 157s Selecting previously unselected package libboost1.83-dev:amd64. 157s Preparing to unpack .../023-libboost1.83-dev_1.83.0-4.1ubuntu2_amd64.deb ... 157s Unpacking libboost1.83-dev:amd64 (1.83.0-4.1ubuntu2) ... 159s Selecting previously unselected package libboost-dev:amd64. 159s Preparing to unpack .../024-libboost-dev_1.83.0.2ubuntu1_amd64.deb ... 159s Unpacking libboost-dev:amd64 (1.83.0.2ubuntu1) ... 159s Selecting previously unselected package libpixman-1-0:amd64. 160s Preparing to unpack .../025-libpixman-1-0_0.44.0-3_amd64.deb ... 160s Unpacking libpixman-1-0:amd64 (0.44.0-3) ... 160s Selecting previously unselected package libxcb-render0:amd64. 160s Preparing to unpack .../026-libxcb-render0_1.17.0-2_amd64.deb ... 160s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 160s Selecting previously unselected package libxcb-shm0:amd64. 160s Preparing to unpack .../027-libxcb-shm0_1.17.0-2_amd64.deb ... 160s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 160s Selecting previously unselected package libxrender1:amd64. 160s Preparing to unpack .../028-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 160s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 160s Selecting previously unselected package libcairo2:amd64. 160s Preparing to unpack .../029-libcairo2_1.18.2-2_amd64.deb ... 160s Unpacking libcairo2:amd64 (1.18.2-2) ... 160s Selecting previously unselected package libcolamd3:amd64. 160s Preparing to unpack .../030-libcolamd3_1%3a7.8.3+dfsg-3_amd64.deb ... 160s Unpacking libcolamd3:amd64 (1:7.8.3+dfsg-3) ... 160s Selecting previously unselected package libdatrie1:amd64. 160s Preparing to unpack .../031-libdatrie1_0.2.13-3build1_amd64.deb ... 160s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 160s Selecting previously unselected package libdeflate0:amd64. 160s Preparing to unpack .../032-libdeflate0_1.23-1_amd64.deb ... 160s Unpacking libdeflate0:amd64 (1.23-1) ... 160s Selecting previously unselected package libgfortran5:amd64. 160s Preparing to unpack .../033-libgfortran5_15-20250222-0ubuntu1_amd64.deb ... 160s Unpacking libgfortran5:amd64 (15-20250222-0ubuntu1) ... 160s Selecting previously unselected package libltdl7:amd64. 160s Preparing to unpack .../034-libltdl7_2.5.4-4_amd64.deb ... 160s Unpacking libltdl7:amd64 (2.5.4-4) ... 160s Selecting previously unselected package libglpk40:amd64. 160s Preparing to unpack .../035-libglpk40_5.0-1build2_amd64.deb ... 160s Unpacking libglpk40:amd64 (5.0-1build2) ... 160s Selecting previously unselected package libgraphite2-3:amd64. 160s Preparing to unpack .../036-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 160s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 160s Selecting previously unselected package libharfbuzz0b:amd64. 160s Preparing to unpack .../037-libharfbuzz0b_10.2.0-1_amd64.deb ... 160s Unpacking libharfbuzz0b:amd64 (10.2.0-1) ... 160s Selecting previously unselected package libsz2:amd64. 160s Preparing to unpack .../038-libsz2_1.1.3-1_amd64.deb ... 160s Unpacking libsz2:amd64 (1.1.3-1) ... 160s Selecting previously unselected package libhdf5-310:amd64. 160s Preparing to unpack .../039-libhdf5-310_1.14.5+repack-3_amd64.deb ... 160s Unpacking libhdf5-310:amd64 (1.14.5+repack-3) ... 160s Selecting previously unselected package libhdf5-hl-310:amd64. 160s Preparing to unpack .../040-libhdf5-hl-310_1.14.5+repack-3_amd64.deb ... 160s Unpacking libhdf5-hl-310:amd64 (1.14.5+repack-3) ... 160s Selecting previously unselected package x11-common. 160s Preparing to unpack .../041-x11-common_1%3a7.7+23ubuntu3_all.deb ... 160s Unpacking x11-common (1:7.7+23ubuntu3) ... 160s Selecting previously unselected package libice6:amd64. 160s Preparing to unpack .../042-libice6_2%3a1.1.1-1_amd64.deb ... 160s Unpacking libice6:amd64 (2:1.1.1-1) ... 160s Selecting previously unselected package libjpeg-turbo8:amd64. 160s Preparing to unpack .../043-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ... 160s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 160s Selecting previously unselected package libjpeg8:amd64. 160s Preparing to unpack .../044-libjpeg8_8c-2ubuntu11_amd64.deb ... 160s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 160s Selecting previously unselected package libjs-bootstrap. 160s Preparing to unpack .../045-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 160s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 160s Selecting previously unselected package libjs-popper.js. 160s Preparing to unpack .../046-libjs-popper.js_1.16.1+ds-6_all.deb ... 160s Unpacking libjs-popper.js (1.16.1+ds-6) ... 160s Selecting previously unselected package libjs-bootstrap4. 160s Preparing to unpack .../047-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 160s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 160s Selecting previously unselected package libjs-d3. 160s Preparing to unpack .../048-libjs-d3_3.5.17-4_all.deb ... 160s Unpacking libjs-d3 (3.5.17-4) ... 160s Selecting previously unselected package libjs-es5-shim. 160s Preparing to unpack .../049-libjs-es5-shim_4.6.7-2_all.deb ... 160s Unpacking libjs-es5-shim (4.6.7-2) ... 160s Selecting previously unselected package libjs-highlight.js. 161s Preparing to unpack .../050-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 161s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 161s Selecting previously unselected package libjs-jquery. 161s Preparing to unpack .../051-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 161s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 161s Selecting previously unselected package libjs-jquery-datatables. 161s Preparing to unpack .../052-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 161s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 161s Selecting previously unselected package libjs-sifter.js. 161s Preparing to unpack .../053-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 161s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 161s Selecting previously unselected package libjs-microplugin.js. 161s Preparing to unpack .../054-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 161s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 161s Selecting previously unselected package libjs-jquery-selectize.js. 161s Preparing to unpack .../055-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 161s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 161s Selecting previously unselected package libjs-jquery-ui. 161s Preparing to unpack .../056-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 161s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 161s Selecting previously unselected package libjs-json. 161s Preparing to unpack .../057-libjs-json_0~20221030+~1.0.8-1_all.deb ... 161s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 161s Selecting previously unselected package libjs-prettify. 161s Preparing to unpack .../058-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 161s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 161s Selecting previously unselected package liblapack3:amd64. 161s Preparing to unpack .../059-liblapack3_3.12.1-2_amd64.deb ... 161s Unpacking liblapack3:amd64 (3.12.1-2) ... 161s Selecting previously unselected package liblerc4:amd64. 161s Preparing to unpack .../060-liblerc4_4.0.0+ds-5ubuntu1_amd64.deb ... 161s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 161s Selecting previously unselected package liblua5.4-0:amd64. 161s Preparing to unpack .../061-liblua5.4-0_5.4.7-1_amd64.deb ... 161s Unpacking liblua5.4-0:amd64 (5.4.7-1) ... 161s Selecting previously unselected package libnetcdf22:amd64. 161s Preparing to unpack .../062-libnetcdf22_1%3a4.9.3-1_amd64.deb ... 161s Unpacking libnetcdf22:amd64 (1:4.9.3-1) ... 161s Selecting previously unselected package libthai-data. 161s Preparing to unpack .../063-libthai-data_0.1.29-2build1_all.deb ... 161s Unpacking libthai-data (0.1.29-2build1) ... 161s Selecting previously unselected package libthai0:amd64. 161s Preparing to unpack .../064-libthai0_0.1.29-2build1_amd64.deb ... 161s Unpacking libthai0:amd64 (0.1.29-2build1) ... 161s Selecting previously unselected package libpango-1.0-0:amd64. 161s Preparing to unpack .../065-libpango-1.0-0_1.56.2-1_amd64.deb ... 161s Unpacking libpango-1.0-0:amd64 (1.56.2-1) ... 161s Selecting previously unselected package libpangoft2-1.0-0:amd64. 161s Preparing to unpack .../066-libpangoft2-1.0-0_1.56.2-1_amd64.deb ... 161s Unpacking libpangoft2-1.0-0:amd64 (1.56.2-1) ... 161s Selecting previously unselected package libpangocairo-1.0-0:amd64. 161s Preparing to unpack .../067-libpangocairo-1.0-0_1.56.2-1_amd64.deb ... 161s Unpacking libpangocairo-1.0-0:amd64 (1.56.2-1) ... 161s Selecting previously unselected package libpaper2:amd64. 161s Preparing to unpack .../068-libpaper2_2.2.5-0.3_amd64.deb ... 161s Unpacking libpaper2:amd64 (2.2.5-0.3) ... 161s Selecting previously unselected package libpaper-utils. 161s Preparing to unpack .../069-libpaper-utils_2.2.5-0.3_amd64.deb ... 161s Unpacking libpaper-utils (2.2.5-0.3) ... 161s Selecting previously unselected package libsharpyuv0:amd64. 161s Preparing to unpack .../070-libsharpyuv0_1.5.0-0.1_amd64.deb ... 161s Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ... 161s Selecting previously unselected package libsm6:amd64. 161s Preparing to unpack .../071-libsm6_2%3a1.2.4-1_amd64.deb ... 161s Unpacking libsm6:amd64 (2:1.2.4-1) ... 161s Selecting previously unselected package libtcl8.6:amd64. 161s Preparing to unpack .../072-libtcl8.6_8.6.16+dfsg-1_amd64.deb ... 161s Unpacking libtcl8.6:amd64 (8.6.16+dfsg-1) ... 161s Selecting previously unselected package libjbig0:amd64. 161s Preparing to unpack .../073-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 161s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 161s Selecting previously unselected package libwebp7:amd64. 161s Preparing to unpack .../074-libwebp7_1.5.0-0.1_amd64.deb ... 161s Unpacking libwebp7:amd64 (1.5.0-0.1) ... 161s Selecting previously unselected package libtiff6:amd64. 162s Preparing to unpack .../075-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ... 162s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 162s Selecting previously unselected package libxft2:amd64. 162s Preparing to unpack .../076-libxft2_2.3.6-1build1_amd64.deb ... 162s Unpacking libxft2:amd64 (2.3.6-1build1) ... 162s Selecting previously unselected package libxss1:amd64. 162s Preparing to unpack .../077-libxss1_1%3a1.2.3-1build3_amd64.deb ... 162s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 162s Selecting previously unselected package libtk8.6:amd64. 162s Preparing to unpack .../078-libtk8.6_8.6.16-1_amd64.deb ... 162s Unpacking libtk8.6:amd64 (8.6.16-1) ... 162s Selecting previously unselected package libxt6t64:amd64. 162s Preparing to unpack .../079-libxt6t64_1%3a1.2.1-1.2build1_amd64.deb ... 162s Unpacking libxt6t64:amd64 (1:1.2.1-1.2build1) ... 162s Selecting previously unselected package zip. 162s Preparing to unpack .../080-zip_3.0-14ubuntu2_amd64.deb ... 162s Unpacking zip (3.0-14ubuntu2) ... 162s Selecting previously unselected package unzip. 162s Preparing to unpack .../081-unzip_6.0-28ubuntu6_amd64.deb ... 162s Unpacking unzip (6.0-28ubuntu6) ... 162s Selecting previously unselected package xdg-utils. 162s Preparing to unpack .../082-xdg-utils_1.2.1-2ubuntu1_all.deb ... 162s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 162s Selecting previously unselected package r-base-core. 162s Preparing to unpack .../083-r-base-core_4.4.3-1_amd64.deb ... 162s Unpacking r-base-core (4.4.3-1) ... 162s Selecting previously unselected package r-cran-littler. 162s Preparing to unpack .../084-r-cran-littler_0.3.20-2_amd64.deb ... 162s Unpacking r-cran-littler (0.3.20-2) ... 162s Selecting previously unselected package littler. 162s Preparing to unpack .../085-littler_0.3.20-2_all.deb ... 162s Unpacking littler (0.3.20-2) ... 162s Selecting previously unselected package node-bootstrap-sass. 162s Preparing to unpack .../086-node-bootstrap-sass_3.4.3-2_all.deb ... 162s Unpacking node-bootstrap-sass (3.4.3-2) ... 162s Selecting previously unselected package node-html5shiv. 162s Preparing to unpack .../087-node-html5shiv_3.7.3+dfsg-5_all.deb ... 162s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 162s Selecting previously unselected package node-normalize.css. 162s Preparing to unpack .../088-node-normalize.css_8.0.1-5_all.deb ... 162s Unpacking node-normalize.css (8.0.1-5) ... 162s Selecting previously unselected package pandoc-data. 162s Preparing to unpack .../089-pandoc-data_3.1.11.1-3build1_all.deb ... 162s Unpacking pandoc-data (3.1.11.1-3build1) ... 162s Selecting previously unselected package pandoc. 162s Preparing to unpack .../090-pandoc_3.1.11.1+ds-2_amd64.deb ... 162s Unpacking pandoc (3.1.11.1+ds-2) ... 163s Selecting previously unselected package r-bioc-biocgenerics. 163s Preparing to unpack .../091-r-bioc-biocgenerics_0.52.0-2_all.deb ... 163s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 163s Selecting previously unselected package r-bioc-s4vectors. 163s Preparing to unpack .../092-r-bioc-s4vectors_0.44.0+dfsg-2_amd64.deb ... 163s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 163s Selecting previously unselected package r-bioc-iranges. 163s Preparing to unpack .../093-r-bioc-iranges_2.40.1-2_amd64.deb ... 163s Unpacking r-bioc-iranges (2.40.1-2) ... 164s Selecting previously unselected package zlib1g-dev:amd64. 164s Preparing to unpack .../094-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ... 164s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 164s Selecting previously unselected package r-bioc-zlibbioc. 164s Preparing to unpack .../095-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 164s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 164s Selecting previously unselected package r-bioc-xvector. 164s Preparing to unpack .../096-r-bioc-xvector_0.46.0-2_amd64.deb ... 164s Unpacking r-bioc-xvector (0.46.0-2) ... 164s Selecting previously unselected package r-cran-curl. 164s Preparing to unpack .../097-r-cran-curl_6.2.1+dfsg-1ubuntu1_amd64.deb ... 164s Unpacking r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 164s Selecting previously unselected package r-cran-jsonlite. 164s Preparing to unpack .../098-r-cran-jsonlite_1.9.1+dfsg-1_amd64.deb ... 164s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 164s Selecting previously unselected package r-cran-mime. 164s Preparing to unpack .../099-r-cran-mime_0.12-2_amd64.deb ... 164s Unpacking r-cran-mime (0.12-2) ... 164s Selecting previously unselected package r-cran-sys. 164s Preparing to unpack .../100-r-cran-sys_3.4.3-1_amd64.deb ... 164s Unpacking r-cran-sys (3.4.3-1) ... 164s Selecting previously unselected package r-cran-askpass. 164s Preparing to unpack .../101-r-cran-askpass_1.2.1-1_amd64.deb ... 164s Unpacking r-cran-askpass (1.2.1-1) ... 164s Selecting previously unselected package r-cran-openssl. 164s Preparing to unpack .../102-r-cran-openssl_2.3.2+dfsg-1_amd64.deb ... 164s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 164s Selecting previously unselected package r-cran-r6. 164s Preparing to unpack .../103-r-cran-r6_2.6.1-1_all.deb ... 164s Unpacking r-cran-r6 (2.6.1-1) ... 164s Selecting previously unselected package r-cran-httr. 164s Preparing to unpack .../104-r-cran-httr_1.4.7+dfsg-1_all.deb ... 164s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 164s Selecting previously unselected package r-bioc-ucsc.utils. 164s Preparing to unpack .../105-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 164s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 164s Selecting previously unselected package r-bioc-genomeinfodbdata. 164s Preparing to unpack .../106-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 164s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 164s Selecting previously unselected package r-bioc-genomeinfodb. 164s Preparing to unpack .../107-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 164s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 164s Selecting previously unselected package r-cran-crayon. 164s Preparing to unpack .../108-r-cran-crayon_1.5.3-1_all.deb ... 164s Unpacking r-cran-crayon (1.5.3-1) ... 164s Selecting previously unselected package r-bioc-biostrings. 164s Preparing to unpack .../109-r-bioc-biostrings_2.74.1+dfsg-2_amd64.deb ... 164s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 164s Selecting previously unselected package r-cran-base64enc. 164s Preparing to unpack .../110-r-cran-base64enc_0.1-3-3_amd64.deb ... 164s Unpacking r-cran-base64enc (0.1-3-3) ... 164s Selecting previously unselected package r-cran-bh. 164s Preparing to unpack .../111-r-cran-bh_1.84.0-1_all.deb ... 164s Unpacking r-cran-bh (1.84.0-1) ... 164s Selecting previously unselected package r-cran-bigmemory.sri. 164s Preparing to unpack .../112-r-cran-bigmemory.sri_0.1.8-1_all.deb ... 164s Unpacking r-cran-bigmemory.sri (0.1.8-1) ... 164s Selecting previously unselected package r-cran-pkgkitten. 164s Preparing to unpack .../113-r-cran-pkgkitten_0.2.4-1_all.deb ... 164s Unpacking r-cran-pkgkitten (0.2.4-1) ... 164s Selecting previously unselected package r-cran-rcpp. 164s Preparing to unpack .../114-r-cran-rcpp_1.0.14-1_amd64.deb ... 164s Unpacking r-cran-rcpp (1.0.14-1) ... 165s Selecting previously unselected package r-cran-uuid. 165s Preparing to unpack .../115-r-cran-uuid_1.2-1-1_amd64.deb ... 165s Unpacking r-cran-uuid (1.2-1-1) ... 165s Selecting previously unselected package r-cran-bigmemory. 165s Preparing to unpack .../116-r-cran-bigmemory_4.6.4-1ubuntu1_amd64.deb ... 165s Unpacking r-cran-bigmemory (4.6.4-1ubuntu1) ... 165s Selecting previously unselected package r-cran-bio3d. 165s Preparing to unpack .../117-r-cran-bio3d_2.4-5-1_amd64.deb ... 165s Unpacking r-cran-bio3d (2.4-5-1) ... 165s Selecting previously unselected package r-cran-bitops. 165s Preparing to unpack .../118-r-cran-bitops_1.0-9-1_amd64.deb ... 165s Unpacking r-cran-bitops (1.0-9-1) ... 165s Selecting previously unselected package r-cran-brio. 165s Preparing to unpack .../119-r-cran-brio_1.1.5-1_amd64.deb ... 165s Unpacking r-cran-brio (1.1.5-1) ... 165s Selecting previously unselected package r-cran-rlang. 165s Preparing to unpack .../120-r-cran-rlang_1.1.5-1_amd64.deb ... 165s Unpacking r-cran-rlang (1.1.5-1) ... 165s Selecting previously unselected package r-cran-fastmap. 165s Preparing to unpack .../121-r-cran-fastmap_1.2.0-1_amd64.deb ... 165s Unpacking r-cran-fastmap (1.2.0-1) ... 165s Selecting previously unselected package r-cran-cachem. 165s Preparing to unpack .../122-r-cran-cachem_1.1.0-1_amd64.deb ... 165s Unpacking r-cran-cachem (1.1.0-1) ... 165s Selecting previously unselected package r-cran-digest. 165s Preparing to unpack .../123-r-cran-digest_0.6.37-1_amd64.deb ... 165s Unpacking r-cran-digest (0.6.37-1) ... 165s Selecting previously unselected package r-cran-htmltools. 165s Preparing to unpack .../124-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 165s Unpacking r-cran-htmltools (0.5.8.1-1) ... 165s Selecting previously unselected package r-cran-jquerylib. 165s Preparing to unpack .../125-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 165s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 165s Selecting previously unselected package r-cran-cli. 165s Preparing to unpack .../126-r-cran-cli_3.6.4-1_amd64.deb ... 165s Unpacking r-cran-cli (3.6.4-1) ... 165s Selecting previously unselected package r-cran-glue. 165s Preparing to unpack .../127-r-cran-glue_1.8.0-1_amd64.deb ... 165s Unpacking r-cran-glue (1.8.0-1) ... 165s Selecting previously unselected package r-cran-lifecycle. 165s Preparing to unpack .../128-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 165s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 165s Selecting previously unselected package r-cran-memoise. 165s Preparing to unpack .../129-r-cran-memoise_2.0.1-1_all.deb ... 165s Unpacking r-cran-memoise (2.0.1-1) ... 165s Selecting previously unselected package r-cran-fs. 165s Preparing to unpack .../130-r-cran-fs_1.6.5+dfsg-1_amd64.deb ... 165s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 165s Selecting previously unselected package r-cran-rappdirs. 165s Preparing to unpack .../131-r-cran-rappdirs_0.3.3-1_amd64.deb ... 165s Unpacking r-cran-rappdirs (0.3.3-1) ... 165s Selecting previously unselected package r-cran-sass. 165s Preparing to unpack .../132-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 165s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 165s Selecting previously unselected package r-cran-bslib. 165s Preparing to unpack .../133-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 165s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 165s Selecting previously unselected package r-cran-ps. 165s Preparing to unpack .../134-r-cran-ps_1.9.0-1_amd64.deb ... 165s Unpacking r-cran-ps (1.9.0-1) ... 165s Selecting previously unselected package r-cran-processx. 165s Preparing to unpack .../135-r-cran-processx_3.8.6-1_amd64.deb ... 165s Unpacking r-cran-processx (3.8.6-1) ... 166s Selecting previously unselected package r-cran-callr. 166s Preparing to unpack .../136-r-cran-callr_3.7.6-1_all.deb ... 166s Unpacking r-cran-callr (3.7.6-1) ... 166s Selecting previously unselected package r-cran-commonmark. 166s Preparing to unpack .../137-r-cran-commonmark_1.9.2-2_amd64.deb ... 166s Unpacking r-cran-commonmark (1.9.2-2) ... 166s Selecting previously unselected package r-cran-cpp11. 166s Preparing to unpack .../138-r-cran-cpp11_0.5.2-1_all.deb ... 166s Unpacking r-cran-cpp11 (0.5.2-1) ... 166s Selecting previously unselected package r-cran-desc. 166s Preparing to unpack .../139-r-cran-desc_1.4.3-1_all.deb ... 166s Unpacking r-cran-desc (1.4.3-1) ... 166s Selecting previously unselected package r-cran-diffobj. 166s Preparing to unpack .../140-r-cran-diffobj_0.3.5-1_amd64.deb ... 166s Unpacking r-cran-diffobj (0.3.5-1) ... 166s Selecting previously unselected package r-cran-evaluate. 166s Preparing to unpack .../141-r-cran-evaluate_1.0.3-1_all.deb ... 166s Unpacking r-cran-evaluate (1.0.3-1) ... 166s Selecting previously unselected package r-cran-fontawesome. 166s Preparing to unpack .../142-r-cran-fontawesome_0.5.3-1_all.deb ... 166s Unpacking r-cran-fontawesome (0.5.3-1) ... 166s Selecting previously unselected package r-cran-xfun. 166s Preparing to unpack .../143-r-cran-xfun_0.51+dfsg-1_amd64.deb ... 166s Unpacking r-cran-xfun (0.51+dfsg-1) ... 166s Selecting previously unselected package r-cran-highr. 166s Preparing to unpack .../144-r-cran-highr_0.11+dfsg-1_all.deb ... 166s Unpacking r-cran-highr (0.11+dfsg-1) ... 166s Selecting previously unselected package r-cran-later. 166s Preparing to unpack .../145-r-cran-later_1.4.1+dfsg-1_amd64.deb ... 166s Unpacking r-cran-later (1.4.1+dfsg-1) ... 166s Selecting previously unselected package r-cran-magrittr. 166s Preparing to unpack .../146-r-cran-magrittr_2.0.3-1_amd64.deb ... 166s Unpacking r-cran-magrittr (2.0.3-1) ... 166s Selecting previously unselected package r-cran-promises. 166s Preparing to unpack .../147-r-cran-promises_1.3.2+dfsg-1_amd64.deb ... 166s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 166s Selecting previously unselected package r-cran-httpuv. 166s Preparing to unpack .../148-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 166s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 166s Selecting previously unselected package r-cran-lattice. 166s Preparing to unpack .../149-r-cran-lattice_0.22-6-1_amd64.deb ... 166s Unpacking r-cran-lattice (0.22-6-1) ... 166s Selecting previously unselected package r-cran-matrix. 166s Preparing to unpack .../150-r-cran-matrix_1.7-3-1_amd64.deb ... 166s Unpacking r-cran-matrix (1.7-3-1) ... 166s Selecting previously unselected package r-cran-pkgconfig. 166s Preparing to unpack .../151-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 166s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 166s Selecting previously unselected package r-cran-vctrs. 166s Preparing to unpack .../152-r-cran-vctrs_0.6.5-1_amd64.deb ... 166s Unpacking r-cran-vctrs (0.6.5-1) ... 166s Selecting previously unselected package r-cran-igraph. 166s Preparing to unpack .../153-r-cran-igraph_2.1.4-1_amd64.deb ... 166s Unpacking r-cran-igraph (2.1.4-1) ... 168s Selecting previously unselected package r-cran-yaml. 168s Preparing to unpack .../154-r-cran-yaml_2.3.10-1_amd64.deb ... 168s Unpacking r-cran-yaml (2.3.10-1) ... 168s Selecting previously unselected package libjs-mathjax. 168s Preparing to unpack .../155-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 168s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 168s Selecting previously unselected package r-cran-knitr. 168s Preparing to unpack .../156-r-cran-knitr_1.49+dfsg-1_all.deb ... 168s Unpacking r-cran-knitr (1.49+dfsg-1) ... 168s Selecting previously unselected package r-cran-ncdf4. 168s Preparing to unpack .../157-r-cran-ncdf4_1.23-1build1_amd64.deb ... 168s Unpacking r-cran-ncdf4 (1.23-1build1) ... 168s Selecting previously unselected package r-cran-pkgbuild. 168s Preparing to unpack .../158-r-cran-pkgbuild_1.4.6-1_all.deb ... 168s Unpacking r-cran-pkgbuild (1.4.6-1) ... 168s Selecting previously unselected package r-cran-rprojroot. 168s Preparing to unpack .../159-r-cran-rprojroot_2.0.4-2_all.deb ... 168s Unpacking r-cran-rprojroot (2.0.4-2) ... 168s Selecting previously unselected package r-cran-withr. 168s Preparing to unpack .../160-r-cran-withr_3.0.2+dfsg-1_all.deb ... 168s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 168s Selecting previously unselected package r-cran-pkgload. 168s Preparing to unpack .../161-r-cran-pkgload_1.4.0-1_all.deb ... 168s Unpacking r-cran-pkgload (1.4.0-1) ... 168s Selecting previously unselected package r-cran-praise. 168s Preparing to unpack .../162-r-cran-praise_1.0.0-4build1_all.deb ... 168s Unpacking r-cran-praise (1.0.0-4build1) ... 168s Selecting previously unselected package r-cran-rcurl. 168s Preparing to unpack .../163-r-cran-rcurl_1.98-1.16+dfsg-1_amd64.deb ... 168s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 168s Selecting previously unselected package r-cran-tinytex. 168s Preparing to unpack .../164-r-cran-tinytex_0.56-1_all.deb ... 168s Unpacking r-cran-tinytex (0.56-1) ... 168s Selecting previously unselected package libjs-modernizr. 168s Preparing to unpack .../165-libjs-modernizr_3.13.0-0.1_all.deb ... 168s Unpacking libjs-modernizr (3.13.0-0.1) ... 168s Selecting previously unselected package r-cran-xtable. 168s Preparing to unpack .../166-r-cran-xtable_1%3a1.8-4-2_all.deb ... 168s Unpacking r-cran-xtable (1:1.8-4-2) ... 168s Selecting previously unselected package r-cran-sourcetools. 168s Preparing to unpack .../167-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 168s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 168s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 168s Preparing to unpack .../168-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 168s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 168s Selecting previously unselected package r-cran-shiny. 168s Preparing to unpack .../169-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 168s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 168s Selecting previously unselected package r-cran-rmarkdown. 168s Preparing to unpack .../170-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 168s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 168s Selecting previously unselected package r-cran-waldo. 168s Preparing to unpack .../171-r-cran-waldo_0.6.1-2_all.deb ... 168s Unpacking r-cran-waldo (0.6.1-2) ... 168s Selecting previously unselected package r-cran-testthat. 168s Preparing to unpack .../172-r-cran-testthat_3.2.3-1_amd64.deb ... 168s Unpacking r-cran-testthat (3.2.3-1) ... 168s Selecting previously unselected package r-cran-xml. 168s Preparing to unpack .../173-r-cran-xml_3.99-0.18-1_amd64.deb ... 168s Unpacking r-cran-xml (3.99-0.18-1) ... 168s Setting up libjs-json (0~20221030+~1.0.8-1) ... 168s Setting up javascript-common (12) ... 168s Setting up libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 168s Setting up libpixman-1-0:amd64 (0.44.0-3) ... 168s Setting up libsharpyuv0:amd64 (1.5.0-0.1) ... 168s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 168s Setting up liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 168s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 168s Setting up libxrender1:amd64 (1:0.9.10-1.1build1) ... 168s Setting up libdatrie1:amd64 (0.2.13-3build1) ... 168s Setting up libjs-popper.js (1.16.1+ds-6) ... 168s Setting up libxcb-render0:amd64 (1.17.0-2) ... 168s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 168s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 168s Setting up unzip (6.0-28ubuntu6) ... 168s Setting up x11-common (1:7.7+23ubuntu3) ... 169s Setting up node-html5shiv (3.7.3+dfsg-5) ... 169s Setting up libdeflate0:amd64 (1.23-1) ... 169s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 169s Setting up libxcb-shm0:amd64 (1.17.0-2) ... 169s Setting up libgomp1:amd64 (15-20250222-0ubuntu1) ... 169s Setting up libjs-modernizr (3.13.0-0.1) ... 169s Setting up libjbig0:amd64 (2.1-6.1ubuntu2) ... 169s Setting up libaec0:amd64 (1.1.3-1) ... 169s Setting up libjs-es5-shim (4.6.7-2) ... 169s Setting up zip (3.0-14ubuntu2) ... 169s Setting up libblas3:amd64 (3.12.1-2) ... 169s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 169s Setting up libquadmath0:amd64 (15-20250222-0ubuntu1) ... 169s Setting up libjs-d3 (3.5.17-4) ... 169s Setting up fonts-dejavu-mono (2.37-8) ... 169s Setting up libtcl8.6:amd64 (8.6.16+dfsg-1) ... 169s Setting up fonts-dejavu-core (2.37-8) ... 169s Setting up libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 169s Setting up libltdl7:amd64 (2.5.4-4) ... 169s Setting up libgfortran5:amd64 (15-20250222-0ubuntu1) ... 169s Setting up libwebp7:amd64 (1.5.0-0.1) ... 169s Setting up libubsan1:amd64 (15-20250222-0ubuntu1) ... 169s Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 169s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... 169s Setting up libhwasan0:amd64 (15-20250222-0ubuntu1) ... 169s Setting up libasan8:amd64 (15-20250222-0ubuntu1) ... 169s Setting up libsuitesparseconfig7:amd64 (1:7.8.3+dfsg-3) ... 169s Setting up liblua5.4-0:amd64 (5.4.7-1) ... 169s Setting up libharfbuzz0b:amd64 (10.2.0-1) ... 169s Setting up libthai-data (0.1.29-2build1) ... 169s Setting up node-bootstrap-sass (3.4.3-2) ... 169s Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... 169s Setting up libxss1:amd64 (1:1.2.3-1build3) ... 169s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... 169s Setting up libpaper2:amd64 (2.2.5-0.3) ... 169s Setting up pandoc-data (3.1.11.1-3build1) ... 169s Setting up libtsan2:amd64 (15-20250222-0ubuntu1) ... 169s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 169s Setting up node-normalize.css (8.0.1-5) ... 169s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 169s Setting up xdg-utils (1.2.1-2ubuntu1) ... 169s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 169s Setting up liblsan0:amd64 (15-20250222-0ubuntu1) ... 169s Setting up libsz2:amd64 (1.1.3-1) ... 169s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 169s Setting up libitm1:amd64 (15-20250222-0ubuntu1) ... 169s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 169s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 169s Setting up libice6:amd64 (2:1.1.1-1) ... 169s Setting up liblapack3:amd64 (3.12.1-2) ... 169s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 169s Setting up libamd3:amd64 (1:7.8.3+dfsg-3) ... 169s Setting up libcolamd3:amd64 (1:7.8.3+dfsg-3) ... 169s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 169s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 169s Setting up libpaper-utils (2.2.5-0.3) ... 169s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 169s Setting up libthai0:amd64 (0.1.29-2build1) ... 169s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 169s Setting up pandoc (3.1.11.1+ds-2) ... 169s Setting up libglpk40:amd64 (5.0-1build2) ... 169s Setting up libhdf5-310:amd64 (1.14.5+repack-3) ... 169s Setting up libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 169s Setting up libfontconfig1:amd64 (2.15.0-2ubuntu1) ... 169s Setting up libgcc-14-dev:amd64 (14.2.0-17ubuntu3) ... 169s Setting up libstdc++-14-dev:amd64 (14.2.0-17ubuntu3) ... 169s Setting up libsm6:amd64 (2:1.2.4-1) ... 169s Setting up libhdf5-hl-310:amd64 (1.14.5+repack-3) ... 169s Setting up fontconfig (2.15.0-2ubuntu1) ... 171s Regenerating fonts cache... done. 171s Setting up libxft2:amd64 (2.3.6-1build1) ... 171s Setting up libboost1.83-dev:amd64 (1.83.0-4.1ubuntu2) ... 171s Setting up libtk8.6:amd64 (8.6.16-1) ... 171s Setting up libpango-1.0-0:amd64 (1.56.2-1) ... 171s Setting up libnetcdf22:amd64 (1:4.9.3-1) ... 171s Setting up libcairo2:amd64 (1.18.2-2) ... 171s Setting up libxt6t64:amd64 (1:1.2.1-1.2build1) ... 171s Setting up libboost-dev:amd64 (1.83.0.2ubuntu1) ... 171s Setting up libpangoft2-1.0-0:amd64 (1.56.2-1) ... 171s Setting up libpangocairo-1.0-0:amd64 (1.56.2-1) ... 171s Setting up r-base-core (4.4.3-1) ... 171s Creating config file /etc/R/Renviron with new version 171s Setting up r-cran-crayon (1.5.3-1) ... 171s Setting up r-cran-sourcetools (0.1.7-1-1) ... 171s Setting up r-cran-lattice (0.22-6-1) ... 171s Setting up r-cran-ps (1.9.0-1) ... 171s Setting up r-cran-xml (3.99-0.18-1) ... 171s Setting up r-cran-commonmark (1.9.2-2) ... 171s Setting up r-cran-r6 (2.6.1-1) ... 171s Setting up r-cran-pkgkitten (0.2.4-1) ... 171s Setting up r-cran-magrittr (2.0.3-1) ... 171s Setting up r-cran-rappdirs (0.3.3-1) ... 171s Setting up r-bioc-genomeinfodbdata (1.2.13-2) ... 171s Setting up r-cran-littler (0.3.20-2) ... 171s Setting up r-cran-bh (1.84.0-1) ... 171s Setting up r-cran-ncdf4 (1.23-1build1) ... 171s Setting up r-cran-fs (1.6.5+dfsg-1) ... 171s Setting up r-cran-rcpp (1.0.14-1) ... 171s Setting up r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 171s Setting up r-cran-brio (1.1.5-1) ... 171s Setting up r-cran-diffobj (0.3.5-1) ... 171s Setting up r-cran-bigmemory.sri (0.1.8-1) ... 171s Setting up r-bioc-biocgenerics (0.52.0-2) ... 171s Setting up r-cran-rlang (1.1.5-1) ... 171s Setting up littler (0.3.20-2) ... 171s Setting up r-cran-bio3d (2.4-5-1) ... 171s Setting up r-cran-uuid (1.2-1-1) ... 171s Setting up r-cran-xfun (0.51+dfsg-1) ... 171s Setting up r-cran-sys (3.4.3-1) ... 171s Setting up r-cran-withr (3.0.2+dfsg-1) ... 171s Setting up r-cran-processx (3.8.6-1) ... 171s Setting up r-cran-mime (0.12-2) ... 171s Setting up r-cran-praise (1.0.0-4build1) ... 171s Setting up r-cran-base64enc (0.1-3-3) ... 171s Setting up r-cran-digest (0.6.37-1) ... 171s Setting up r-cran-yaml (2.3.10-1) ... 171s Setting up r-cran-evaluate (1.0.3-1) ... 171s Setting up r-cran-bigmemory (4.6.4-1ubuntu1) ... 171s Setting up r-cran-highr (0.11+dfsg-1) ... 171s Setting up r-cran-glue (1.8.0-1) ... 171s Setting up r-cran-xtable (1:1.8-4-2) ... 171s Setting up r-cran-cli (3.6.4-1) ... 171s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 171s Setting up r-cran-bitops (1.0-9-1) ... 171s Setting up r-cran-rprojroot (2.0.4-2) ... 171s Setting up r-bioc-zlibbioc (1.52.0+dfsg-2) ... 171s Setting up r-cran-askpass (1.2.1-1) ... 171s Setting up r-cran-fastmap (1.2.0-1) ... 171s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ... 171s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 171s Setting up r-cran-cpp11 (0.5.2-1) ... 171s Setting up r-bioc-s4vectors (0.44.0+dfsg-2) ... 171s Setting up r-cran-waldo (0.6.1-2) ... 171s Setting up r-cran-later (1.4.1+dfsg-1) ... 171s Setting up r-cran-matrix (1.7-3-1) ... 171s Setting up r-cran-htmltools (0.5.8.1-1) ... 171s Setting up r-cran-tinytex (0.56-1) ... 171s Setting up r-cran-knitr (1.49+dfsg-1) ... 171s Setting up r-cran-cachem (1.1.0-1) ... 171s Setting up r-cran-sass (0.4.9+dfsg-1) ... 171s Setting up r-bioc-iranges (2.40.1-2) ... 171s Setting up r-cran-rcurl (1.98-1.16+dfsg-1) ... 171s Setting up r-cran-vctrs (0.6.5-1) ... 171s Setting up r-cran-openssl (2.3.2+dfsg-1) ... 171s Setting up r-cran-callr (3.7.6-1) ... 171s Setting up r-cran-desc (1.4.3-1) ... 171s Setting up r-cran-fontawesome (0.5.3-1) ... 171s Setting up r-cran-igraph (2.1.4-1) ... 171s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 171s Setting up r-cran-httr (1.4.7+dfsg-1) ... 171s Setting up r-cran-memoise (2.0.1-1) ... 171s Setting up r-cran-promises (1.3.2+dfsg-1) ... 171s Setting up r-bioc-xvector (0.46.0-2) ... 171s Setting up r-cran-pkgbuild (1.4.6-1) ... 171s Setting up r-cran-pkgload (1.4.0-1) ... 171s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 171s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 171s Setting up r-cran-testthat (3.2.3-1) ... 171s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 171s Setting up r-cran-bslib (0.8.0+dfsg-1) ... 171s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 171s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 171s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 171s Processing triggers for libc-bin (2.41-1ubuntu2) ... 172s Processing triggers for man-db (2.13.0-1) ... 173s Processing triggers for install-info (7.1.1-1) ... 173s autopkgtest [22:06:18]: test run-unit-test: [----------------------- 173s BEGIN TEST testthat.R 174s 174s R version 4.4.3 (2025-02-28) -- "Trophy Case" 174s Copyright (C) 2025 The R Foundation for Statistical Computing 174s Platform: x86_64-pc-linux-gnu 174s 174s R is free software and comes with ABSOLUTELY NO WARRANTY. 174s You are welcome to redistribute it under certain conditions. 174s Type 'license()' or 'licence()' for distribution details. 174s 174s R is a collaborative project with many contributors. 174s Type 'contributors()' for more information and 174s 'citation()' on how to cite R or R packages in publications. 174s 174s Type 'demo()' for some demos, 'help()' for on-line help, or 174s 'help.start()' for an HTML browser interface to help. 174s Type 'q()' to quit R. 174s 174s > library(testthat) 174s > test_check("bio3d") 174s Loading required package: bio3d 179s [ FAIL 0 | WARN 0 | SKIP 29 | PASS 174 ] 179s 179s == Skipped tests (29) ========================================================== 179s * On CRAN (29): 'test-aanma.R:5:3', 'test-aanma.pdbs.R:10:3', 179s 'test-clean.pdb.R:24:3', 'test-cmap.R:20:3', 'test-cna.R:5:3', 179s 'test-core.find.R:5:3', 'test-dccm.R:27:3', 'test-dccm.R:47:3', 179s 'test-dssp.R:4:3', 'test-fitting.R:64:3', 'test-fitting.R:91:4', 179s 'test-fitting.R:116:4', 'test-get.pdb.R:4:3', 'test-get.pdb.R:24:3', 179s 'test-get.seq.R:4:3', 'test-mol2.R:34:3', 'test-mol2.R:49:3', 179s 'test-mol2.R:82:3', 'test-nma.pdbs.R:5:3', 'test-pdb.annotate.R:5:3', 179s 'test-pdbsplit.R:5:3', 'test-read.all.R:6:3', 'test-read.cif.R:5:3', 179s 'test-read.cif.R:49:3', 'test-read.ncdf.R:4:4', 'test-read.pdb.R:43:3', 179s 'test-read.pdb.R:121:3', 'test-read.pdb.R:141:3', 'test-seqaln.R:5:3' 179s 179s [ FAIL 0 | WARN 0 | SKIP 29 | PASS 174 ] 179s > 179s autopkgtest [22:06:24]: test run-unit-test: -----------------------] 180s autopkgtest [22:06:25]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 180s run-unit-test PASS 180s autopkgtest [22:06:25]: test pkg-r-autopkgtest: preparing testbed 388s autopkgtest [22:09:51]: testbed dpkg architecture: amd64 388s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 388s autopkgtest [22:09:51]: testbed apt version: 2.9.31ubuntu1 388s autopkgtest [22:09:51]: @@@@@@@@@@@@@@@@@@@@ test bed setup 388s autopkgtest [22:09:51]: testbed release detected to be: plucky 388s autopkgtest [22:09:51]: updating testbed package index (apt update) 388s + lsb_release --codename --short 388s + RELEASE=plucky 388s + cat 388s + [ plucky != trusty ] 388s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 388s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 388s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 388s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 388s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [44.1 kB] 388s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [14.5 kB] 388s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [369 kB] 388s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [85.7 kB] 388s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [67.4 kB] 388s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 c-n-f Metadata [1852 B] 388s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 c-n-f Metadata [116 B] 388s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [174 kB] 388s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [342 kB] 388s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 c-n-f Metadata [15.3 kB] 388s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [16.1 kB] 388s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [8544 B] 388s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 c-n-f Metadata [628 B] 388s Fetched 1265 kB in 0s (6272 kB/s) 388s Reading package lists... 388s Reading package lists... 388s Building dependency tree... 388s Reading state information... 388s Calculating upgrade... 389s Calculating upgrade... 389s The following package was automatically installed and is no longer required: 389s libnl-genl-3-200 389s Use 'sudo apt autoremove' to remove it. 389s The following NEW packages will be installed: 389s bpftool libdebuginfod-common libdebuginfod1t64 linux-headers-6.14.0-10 389s linux-headers-6.14.0-10-generic linux-image-6.14.0-10-generic 389s linux-modules-6.14.0-10-generic linux-modules-extra-6.14.0-10-generic 389s linux-perf linux-tools-6.14.0-10 linux-tools-6.14.0-10-generic pnp.ids 389s The following packages will be upgraded: 389s apparmor apt apt-utils binutils binutils-common binutils-x86-64-linux-gnu 389s cloud-init cloud-init-base curl dosfstools fwupd gir1.2-girepository-2.0 389s gir1.2-glib-2.0 htop hwdata libapparmor1 libapt-pkg7.0 libaudit-common 389s libaudit1 libbinutils libbrotli1 libcap-ng0 libctf-nobfd0 libctf0 389s libcurl3t64-gnutls libcurl4t64 libestr0 libfwupd3 libgirepository-1.0-1 389s libglib2.0-0t64 libglib2.0-data libgprofng0 libjemalloc2 liblz4-1 liblzma5 389s libmm-glib0 libncurses6 libncursesw6 libnl-3-200 libnl-genl-3-200 389s libnl-route-3-200 libpci3 libpython3-stdlib libpython3.13 389s libpython3.13-minimal libpython3.13-stdlib libselinux1 libsframe1 389s libsqlite3-0 libtinfo6 libxml2 linux-firmware linux-generic 389s linux-headers-generic linux-headers-virtual linux-image-generic 389s linux-image-virtual linux-libc-dev linux-tools-common linux-virtual 389s media-types ncurses-base ncurses-bin ncurses-term pci.ids pciutils 389s pinentry-curses python-apt-common python3 python3-apt python3-cffi-backend 389s python3-dbus python3-gi python3-jinja2 python3-lazr.uri python3-markupsafe 389s python3-minimal python3-systemd python3-yaml python3.13 python3.13-gdbm 389s python3.13-minimal rsync rsyslog strace xz-utils 389s 86 upgraded, 12 newly installed, 0 to remove and 0 not upgraded. 389s Need to get 807 MB of archives. 389s After this operation, 326 MB of additional disk space will be used. 389s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-bin amd64 6.5+20250216-2 [194 kB] 389s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-base all 6.5+20250216-2 [25.9 kB] 389s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-term all 6.5+20250216-2 [276 kB] 389s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 liblz4-1 amd64 1.10.0-4 [66.4 kB] 389s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma5 amd64 5.6.4-1 [157 kB] 389s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libapt-pkg7.0 amd64 2.9.33 [1138 kB] 389s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 apt amd64 2.9.33 [1439 kB] 389s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 apt-utils amd64 2.9.33 [222 kB] 389s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-minimal amd64 3.13.2-2 [27.7 kB] 389s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 python3 amd64 3.13.2-2 [24.0 kB] 389s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13 amd64 3.13.2-2 [2341 kB] 389s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 media-types all 13.0.0 [29.9 kB] 389s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses6 amd64 6.5+20250216-2 [126 kB] 389s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libncursesw6 amd64 6.5+20250216-2 [165 kB] 389s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libtinfo6 amd64 6.5+20250216-2 [119 kB] 389s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libsqlite3-0 amd64 3.46.1-2 [715 kB] 389s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.2-2 [735 kB] 389s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.2-2 [2365 kB] 389s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.2-2 [883 kB] 389s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.2-2 [2066 kB] 389s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.4 kB] 389s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 rsync amd64 3.4.1+ds1-3 [482 kB] 389s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod-common all 0.192-4 [15.4 kB] 389s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit-common all 1:4.0.2-2ubuntu2 [6628 B] 389s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libcap-ng0 amd64 0.8.5-4build1 [15.6 kB] 389s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit1 amd64 1:4.0.2-2ubuntu2 [54.0 kB] 389s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libselinux1 amd64 3.7-3ubuntu3 [87.3 kB] 389s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-girepository-2.0 amd64 1.83.4-1 [25.3 kB] 389s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-glib-2.0 amd64 2.84.0-1 [184 kB] 389s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-0t64 amd64 2.84.0-1 [1669 kB] 389s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libgirepository-1.0-1 amd64 1.83.4-1 [89.5 kB] 389s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libapparmor1 amd64 4.1.0~beta5-0ubuntu8 [55.0 kB] 389s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libestr0 amd64 0.1.11-2 [8340 B] 389s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-data all 2.84.0-1 [53.0 kB] 389s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2ubuntu5 [772 kB] 389s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 python-apt-common all 2.9.9build1 [21.3 kB] 389s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-apt amd64 2.9.9build1 [172 kB] 389s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-cffi-backend amd64 1.17.1-2build2 [96.6 kB] 389s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dbus amd64 1.3.2-5build5 [102 kB] 389s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-4build1 [252 kB] 389s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-yaml amd64 6.0.2-1build2 [144 kB] 389s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 rsyslog amd64 8.2412.0-2ubuntu2 [555 kB] 389s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 apparmor amd64 4.1.0~beta5-0ubuntu8 [701 kB] 389s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 dosfstools amd64 4.2-1.2 [95.0 kB] 389s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-genl-3-200 amd64 3.7.0-1 [12.2 kB] 389s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-route-3-200 amd64 3.7.0-1 [191 kB] 389s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-3-200 amd64 3.7.0-1 [64.9 kB] 389s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 pci.ids all 0.0~2025.03.09-1 [285 kB] 389s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 pciutils amd64 1:3.13.0-2 [110 kB] 389s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libpci3 amd64 1:3.13.0-2 [39.8 kB] 389s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 strace amd64 6.13+ds-1ubuntu1 [622 kB] 389s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 xz-utils amd64 5.6.4-1 [278 kB] 389s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libgprofng0 amd64 2.44-3ubuntu1 [886 kB] 389s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf0 amd64 2.44-3ubuntu1 [96.5 kB] 389s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf-nobfd0 amd64 2.44-3ubuntu1 [98.9 kB] 389s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-x86-64-linux-gnu amd64 2.44-3ubuntu1 [1108 kB] 389s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libbinutils amd64 2.44-3ubuntu1 [585 kB] 389s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils amd64 2.44-3ubuntu1 [208 kB] 389s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-common amd64 2.44-3ubuntu1 [215 kB] 389s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libsframe1 amd64 2.44-3ubuntu1 [14.8 kB] 389s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 hwdata all 0.393-3 [1562 B] 389s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 pnp.ids all 0.393-3 [29.5 kB] 389s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-common all 6.14.0-10.10 [295 kB] 389s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 bpftool amd64 7.6.0+6.14.0-10.10 [1147 kB] 389s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-markupsafe amd64 2.1.5-1build4 [13.4 kB] 389s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 389s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init-base all 25.1-0ubuntu3 [616 kB] 389s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libbrotli1 amd64 1.1.0-2build4 [365 kB] 389s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 curl amd64 8.12.1-3ubuntu1 [258 kB] 389s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4t64 amd64 8.12.1-3ubuntu1 [437 kB] 389s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl3t64-gnutls amd64 8.12.1-3ubuntu1 [432 kB] 389s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 fwupd amd64 2.0.6-4 [5408 kB] 389s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libfwupd3 amd64 2.0.6-4 [136 kB] 389s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libmm-glib0 amd64 1.23.4-0ubuntu3 [251 kB] 389s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 htop amd64 3.4.0-2 [195 kB] 389s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod1t64 amd64 0.192-4 [21.0 kB] 389s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libjemalloc2 amd64 5.3.0-3 [277 kB] 389s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-firmware amd64 20250310.git9e1370d3-0ubuntu1 [571 MB] 393s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-6.14.0-10-generic amd64 6.14.0-10.10 [41.2 MB] 393s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-6.14.0-10-generic amd64 6.14.0-10.10 [15.3 MB] 393s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-extra-6.14.0-10-generic amd64 6.14.0-10.10 [120 MB] 394s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-generic amd64 6.14.0-10.10 [1730 B] 394s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-generic amd64 6.14.0-10.10 [11.1 kB] 394s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-virtual amd64 6.14.0-10.10 [1722 B] 394s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-virtual amd64 6.14.0-10.10 [11.1 kB] 394s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-virtual amd64 6.14.0-10.10 [1642 B] 394s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10 all 6.14.0-10.10 [14.2 MB] 394s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10-generic amd64 6.14.0-10.10 [3915 kB] 394s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-generic amd64 6.14.0-10.10 [11.0 kB] 394s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-libc-dev amd64 6.14.0-10.10 [1723 kB] 394s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-perf amd64 6.14.0-10.10 [4122 kB] 394s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10 amd64 6.14.0-10.10 [1394 kB] 394s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10-generic amd64 6.14.0-10.10 [830 B] 394s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 pinentry-curses amd64 1.3.1-2ubuntu3 [42.3 kB] 394s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lazr.uri all 1.0.6-6 [13.7 kB] 394s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-systemd amd64 235-1build6 [43.9 kB] 394s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-gdbm amd64 3.13.2-2 [31.9 kB] 394s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init all 25.1-0ubuntu3 [2100 B] 395s Preconfiguring packages ... 395s Fetched 807 MB in 5s (149 MB/s) 395s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 395s Preparing to unpack .../ncurses-bin_6.5+20250216-2_amd64.deb ... 395s Unpacking ncurses-bin (6.5+20250216-2) over (6.5+20250216-1) ... 395s Setting up ncurses-bin (6.5+20250216-2) ... 395s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 395s Preparing to unpack .../ncurses-base_6.5+20250216-2_all.deb ... 395s Unpacking ncurses-base (6.5+20250216-2) over (6.5+20250216-1) ... 395s Setting up ncurses-base (6.5+20250216-2) ... 395s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 395s Preparing to unpack .../ncurses-term_6.5+20250216-2_all.deb ... 395s Unpacking ncurses-term (6.5+20250216-2) over (6.5+20250216-1) ... 396s Preparing to unpack .../liblz4-1_1.10.0-4_amd64.deb ... 396s Unpacking liblz4-1:amd64 (1.10.0-4) over (1.10.0-3) ... 396s Setting up liblz4-1:amd64 (1.10.0-4) ... 396s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 396s Preparing to unpack .../liblzma5_5.6.4-1_amd64.deb ... 396s Unpacking liblzma5:amd64 (5.6.4-1) over (5.6.3-1) ... 396s Setting up liblzma5:amd64 (5.6.4-1) ... 396s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 396s Preparing to unpack .../libapt-pkg7.0_2.9.33_amd64.deb ... 396s Unpacking libapt-pkg7.0:amd64 (2.9.33) over (2.9.31ubuntu1) ... 396s Setting up libapt-pkg7.0:amd64 (2.9.33) ... 396s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 396s Preparing to unpack .../archives/apt_2.9.33_amd64.deb ... 396s Unpacking apt (2.9.33) over (2.9.31ubuntu1) ... 396s Setting up apt (2.9.33) ... 397s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 397s Preparing to unpack .../apt-utils_2.9.33_amd64.deb ... 397s Unpacking apt-utils (2.9.33) over (2.9.31ubuntu1) ... 397s Preparing to unpack .../python3-minimal_3.13.2-2_amd64.deb ... 397s Unpacking python3-minimal (3.13.2-2) over (3.13.2-1) ... 397s Setting up python3-minimal (3.13.2-2) ... 397s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 397s Preparing to unpack .../0-python3_3.13.2-2_amd64.deb ... 397s Unpacking python3 (3.13.2-2) over (3.13.2-1) ... 397s Preparing to unpack .../1-libpython3.13_3.13.2-2_amd64.deb ... 397s Unpacking libpython3.13:amd64 (3.13.2-2) over (3.13.2-1) ... 397s Preparing to unpack .../2-media-types_13.0.0_all.deb ... 397s Unpacking media-types (13.0.0) over (12.0.0) ... 397s Preparing to unpack .../3-libncurses6_6.5+20250216-2_amd64.deb ... 397s Unpacking libncurses6:amd64 (6.5+20250216-2) over (6.5+20250216-1) ... 397s Preparing to unpack .../4-libncursesw6_6.5+20250216-2_amd64.deb ... 397s Unpacking libncursesw6:amd64 (6.5+20250216-2) over (6.5+20250216-1) ... 397s Preparing to unpack .../5-libtinfo6_6.5+20250216-2_amd64.deb ... 397s Unpacking libtinfo6:amd64 (6.5+20250216-2) over (6.5+20250216-1) ... 398s Setting up libtinfo6:amd64 (6.5+20250216-2) ... 398s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 398s Preparing to unpack .../0-libsqlite3-0_3.46.1-2_amd64.deb ... 398s Unpacking libsqlite3-0:amd64 (3.46.1-2) over (3.46.1-1) ... 398s Preparing to unpack .../1-python3.13_3.13.2-2_amd64.deb ... 398s Unpacking python3.13 (3.13.2-2) over (3.13.2-1) ... 398s Preparing to unpack .../2-python3.13-minimal_3.13.2-2_amd64.deb ... 398s Unpacking python3.13-minimal (3.13.2-2) over (3.13.2-1) ... 398s Preparing to unpack .../3-libpython3.13-minimal_3.13.2-2_amd64.deb ... 398s Unpacking libpython3.13-minimal:amd64 (3.13.2-2) over (3.13.2-1) ... 398s Preparing to unpack .../4-libpython3.13-stdlib_3.13.2-2_amd64.deb ... 398s Unpacking libpython3.13-stdlib:amd64 (3.13.2-2) over (3.13.2-1) ... 398s Preparing to unpack .../5-libpython3-stdlib_3.13.2-2_amd64.deb ... 398s Unpacking libpython3-stdlib:amd64 (3.13.2-2) over (3.13.2-1) ... 398s Preparing to unpack .../6-rsync_3.4.1+ds1-3_amd64.deb ... 398s Unpacking rsync (3.4.1+ds1-3) over (3.4.1-0syncable1) ... 398s Selecting previously unselected package libdebuginfod-common. 398s Preparing to unpack .../7-libdebuginfod-common_0.192-4_all.deb ... 398s Unpacking libdebuginfod-common (0.192-4) ... 398s Preparing to unpack .../8-libaudit-common_1%3a4.0.2-2ubuntu2_all.deb ... 398s Unpacking libaudit-common (1:4.0.2-2ubuntu2) over (1:4.0.2-2ubuntu1) ... 398s Setting up libaudit-common (1:4.0.2-2ubuntu2) ... 398s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109147 files and directories currently installed.) 398s Preparing to unpack .../libcap-ng0_0.8.5-4build1_amd64.deb ... 398s Unpacking libcap-ng0:amd64 (0.8.5-4build1) over (0.8.5-4) ... 398s Setting up libcap-ng0:amd64 (0.8.5-4build1) ... 398s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109147 files and directories currently installed.) 398s Preparing to unpack .../libaudit1_1%3a4.0.2-2ubuntu2_amd64.deb ... 398s Unpacking libaudit1:amd64 (1:4.0.2-2ubuntu2) over (1:4.0.2-2ubuntu1) ... 398s Setting up libaudit1:amd64 (1:4.0.2-2ubuntu2) ... 399s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109147 files and directories currently installed.) 399s Preparing to unpack .../libselinux1_3.7-3ubuntu3_amd64.deb ... 399s Unpacking libselinux1:amd64 (3.7-3ubuntu3) over (3.7-3ubuntu2) ... 399s Setting up libselinux1:amd64 (3.7-3ubuntu3) ... 399s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109147 files and directories currently installed.) 399s Preparing to unpack .../00-gir1.2-girepository-2.0_1.83.4-1_amd64.deb ... 399s Unpacking gir1.2-girepository-2.0:amd64 (1.83.4-1) over (1.82.0-4) ... 399s Preparing to unpack .../01-gir1.2-glib-2.0_2.84.0-1_amd64.deb ... 399s Unpacking gir1.2-glib-2.0:amd64 (2.84.0-1) over (2.83.5-1) ... 399s Preparing to unpack .../02-libglib2.0-0t64_2.84.0-1_amd64.deb ... 399s Unpacking libglib2.0-0t64:amd64 (2.84.0-1) over (2.83.5-1) ... 399s Preparing to unpack .../03-libgirepository-1.0-1_1.83.4-1_amd64.deb ... 399s Unpacking libgirepository-1.0-1:amd64 (1.83.4-1) over (1.82.0-4) ... 399s Preparing to unpack .../04-libapparmor1_4.1.0~beta5-0ubuntu8_amd64.deb ... 399s Unpacking libapparmor1:amd64 (4.1.0~beta5-0ubuntu8) over (4.1.0~beta5-0ubuntu6) ... 399s Preparing to unpack .../05-libestr0_0.1.11-2_amd64.deb ... 399s Unpacking libestr0:amd64 (0.1.11-2) over (0.1.11-1build1) ... 399s Preparing to unpack .../06-libglib2.0-data_2.84.0-1_all.deb ... 399s Unpacking libglib2.0-data (2.84.0-1) over (2.83.5-1) ... 399s Preparing to unpack .../07-libxml2_2.12.7+dfsg+really2.9.14-0.2ubuntu5_amd64.deb ... 399s Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2ubuntu5) over (2.12.7+dfsg+really2.9.14-0.2ubuntu4) ... 399s Preparing to unpack .../08-python-apt-common_2.9.9build1_all.deb ... 399s Unpacking python-apt-common (2.9.9build1) over (2.9.9) ... 399s Preparing to unpack .../09-python3-apt_2.9.9build1_amd64.deb ... 399s Unpacking python3-apt (2.9.9build1) over (2.9.9) ... 399s Preparing to unpack .../10-python3-cffi-backend_1.17.1-2build2_amd64.deb ... 399s Unpacking python3-cffi-backend:amd64 (1.17.1-2build2) over (1.17.1-2build1) ... 399s Preparing to unpack .../11-python3-dbus_1.3.2-5build5_amd64.deb ... 399s Unpacking python3-dbus (1.3.2-5build5) over (1.3.2-5build4) ... 399s Preparing to unpack .../12-python3-gi_3.50.0-4build1_amd64.deb ... 399s Unpacking python3-gi (3.50.0-4build1) over (3.50.0-4) ... 400s Preparing to unpack .../13-python3-yaml_6.0.2-1build2_amd64.deb ... 400s Unpacking python3-yaml (6.0.2-1build2) over (6.0.2-1build1) ... 400s Preparing to unpack .../14-rsyslog_8.2412.0-2ubuntu2_amd64.deb ... 400s Unpacking rsyslog (8.2412.0-2ubuntu2) over (8.2412.0-2ubuntu1) ... 400s Preparing to unpack .../15-apparmor_4.1.0~beta5-0ubuntu8_amd64.deb ... 400s Unpacking apparmor (4.1.0~beta5-0ubuntu8) over (4.1.0~beta5-0ubuntu6) ... 401s Preparing to unpack .../16-dosfstools_4.2-1.2_amd64.deb ... 401s Unpacking dosfstools (4.2-1.2) over (4.2-1.1build1) ... 401s Preparing to unpack .../17-libnl-genl-3-200_3.7.0-1_amd64.deb ... 401s Unpacking libnl-genl-3-200:amd64 (3.7.0-1) over (3.7.0-0.3build2) ... 401s Preparing to unpack .../18-libnl-route-3-200_3.7.0-1_amd64.deb ... 401s Unpacking libnl-route-3-200:amd64 (3.7.0-1) over (3.7.0-0.3build2) ... 401s Preparing to unpack .../19-libnl-3-200_3.7.0-1_amd64.deb ... 401s Unpacking libnl-3-200:amd64 (3.7.0-1) over (3.7.0-0.3build2) ... 401s Preparing to unpack .../20-pci.ids_0.0~2025.03.09-1_all.deb ... 401s Unpacking pci.ids (0.0~2025.03.09-1) over (0.0~2025.02.12-1) ... 401s Preparing to unpack .../21-pciutils_1%3a3.13.0-2_amd64.deb ... 401s Unpacking pciutils (1:3.13.0-2) over (1:3.13.0-1) ... 401s Preparing to unpack .../22-libpci3_1%3a3.13.0-2_amd64.deb ... 401s Unpacking libpci3:amd64 (1:3.13.0-2) over (1:3.13.0-1) ... 401s Preparing to unpack .../23-strace_6.13+ds-1ubuntu1_amd64.deb ... 401s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 401s Preparing to unpack .../24-xz-utils_5.6.4-1_amd64.deb ... 401s Unpacking xz-utils (5.6.4-1) over (5.6.3-1) ... 401s Preparing to unpack .../25-libgprofng0_2.44-3ubuntu1_amd64.deb ... 401s Unpacking libgprofng0:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 401s Preparing to unpack .../26-libctf0_2.44-3ubuntu1_amd64.deb ... 401s Unpacking libctf0:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 401s Preparing to unpack .../27-libctf-nobfd0_2.44-3ubuntu1_amd64.deb ... 401s Unpacking libctf-nobfd0:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 401s Preparing to unpack .../28-binutils-x86-64-linux-gnu_2.44-3ubuntu1_amd64.deb ... 401s Unpacking binutils-x86-64-linux-gnu (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 401s Preparing to unpack .../29-libbinutils_2.44-3ubuntu1_amd64.deb ... 401s Unpacking libbinutils:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 401s Preparing to unpack .../30-binutils_2.44-3ubuntu1_amd64.deb ... 401s Unpacking binutils (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 401s Preparing to unpack .../31-binutils-common_2.44-3ubuntu1_amd64.deb ... 401s Unpacking binutils-common:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 401s Preparing to unpack .../32-libsframe1_2.44-3ubuntu1_amd64.deb ... 401s Unpacking libsframe1:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 402s Preparing to unpack .../33-hwdata_0.393-3_all.deb ... 402s Unpacking hwdata (0.393-3) over (0.393-1) ... 402s Selecting previously unselected package pnp.ids. 402s Preparing to unpack .../34-pnp.ids_0.393-3_all.deb ... 402s Unpacking pnp.ids (0.393-3) ... 402s Preparing to unpack .../35-linux-tools-common_6.14.0-10.10_all.deb ... 402s Unpacking linux-tools-common (6.14.0-10.10) over (6.12.0-16.16) ... 402s Selecting previously unselected package bpftool. 402s Preparing to unpack .../36-bpftool_7.6.0+6.14.0-10.10_amd64.deb ... 402s Unpacking bpftool (7.6.0+6.14.0-10.10) ... 402s Preparing to unpack .../37-python3-markupsafe_2.1.5-1build4_amd64.deb ... 402s Unpacking python3-markupsafe (2.1.5-1build4) over (2.1.5-1build3) ... 402s Preparing to unpack .../38-python3-jinja2_3.1.5-2ubuntu1_all.deb ... 402s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 402s Preparing to unpack .../39-cloud-init-base_25.1-0ubuntu3_all.deb ... 402s Unpacking cloud-init-base (25.1-0ubuntu3) over (25.1-0ubuntu2) ... 402s Preparing to unpack .../40-libbrotli1_1.1.0-2build4_amd64.deb ... 402s Unpacking libbrotli1:amd64 (1.1.0-2build4) over (1.1.0-2build3) ... 402s Preparing to unpack .../41-curl_8.12.1-3ubuntu1_amd64.deb ... 402s Unpacking curl (8.12.1-3ubuntu1) over (8.12.1-2ubuntu1) ... 402s Preparing to unpack .../42-libcurl4t64_8.12.1-3ubuntu1_amd64.deb ... 402s Unpacking libcurl4t64:amd64 (8.12.1-3ubuntu1) over (8.12.1-2ubuntu1) ... 402s Preparing to unpack .../43-libcurl3t64-gnutls_8.12.1-3ubuntu1_amd64.deb ... 402s Unpacking libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) over (8.12.1-2ubuntu1) ... 402s Preparing to unpack .../44-fwupd_2.0.6-4_amd64.deb ... 403s Unpacking fwupd (2.0.6-4) over (2.0.6-3) ... 403s Preparing to unpack .../45-libfwupd3_2.0.6-4_amd64.deb ... 403s Unpacking libfwupd3:amd64 (2.0.6-4) over (2.0.6-3) ... 403s Preparing to unpack .../46-libmm-glib0_1.23.4-0ubuntu3_amd64.deb ... 403s Unpacking libmm-glib0:amd64 (1.23.4-0ubuntu3) over (1.23.4-0ubuntu2) ... 403s Preparing to unpack .../47-htop_3.4.0-2_amd64.deb ... 403s Unpacking htop (3.4.0-2) over (3.3.0-5) ... 403s Selecting previously unselected package libdebuginfod1t64:amd64. 403s Preparing to unpack .../48-libdebuginfod1t64_0.192-4_amd64.deb ... 403s Unpacking libdebuginfod1t64:amd64 (0.192-4) ... 403s Preparing to unpack .../49-libjemalloc2_5.3.0-3_amd64.deb ... 403s Unpacking libjemalloc2:amd64 (5.3.0-3) over (5.3.0-2build1) ... 403s Preparing to unpack .../50-linux-firmware_20250310.git9e1370d3-0ubuntu1_amd64.deb ... 403s Unpacking linux-firmware (20250310.git9e1370d3-0ubuntu1) over (20250204.git0fd450ee-0ubuntu1) ... 406s Selecting previously unselected package linux-modules-6.14.0-10-generic. 406s Preparing to unpack .../51-linux-modules-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 406s Unpacking linux-modules-6.14.0-10-generic (6.14.0-10.10) ... 406s Selecting previously unselected package linux-image-6.14.0-10-generic. 406s Preparing to unpack .../52-linux-image-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 407s Unpacking linux-image-6.14.0-10-generic (6.14.0-10.10) ... 407s Selecting previously unselected package linux-modules-extra-6.14.0-10-generic. 407s Preparing to unpack .../53-linux-modules-extra-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 407s Unpacking linux-modules-extra-6.14.0-10-generic (6.14.0-10.10) ... 408s Preparing to unpack .../54-linux-generic_6.14.0-10.10_amd64.deb ... 408s Unpacking linux-generic (6.14.0-10.10) over (6.12.0-16.16+2) ... 408s Preparing to unpack .../55-linux-image-generic_6.14.0-10.10_amd64.deb ... 408s Unpacking linux-image-generic (6.14.0-10.10) over (6.12.0-16.16+2) ... 408s Preparing to unpack .../56-linux-virtual_6.14.0-10.10_amd64.deb ... 408s Unpacking linux-virtual (6.14.0-10.10) over (6.12.0-16.16+2) ... 408s Preparing to unpack .../57-linux-image-virtual_6.14.0-10.10_amd64.deb ... 408s Unpacking linux-image-virtual (6.14.0-10.10) over (6.12.0-16.16+2) ... 408s Preparing to unpack .../58-linux-headers-virtual_6.14.0-10.10_amd64.deb ... 408s Unpacking linux-headers-virtual (6.14.0-10.10) over (6.12.0-16.16+2) ... 408s Selecting previously unselected package linux-headers-6.14.0-10. 408s Preparing to unpack .../59-linux-headers-6.14.0-10_6.14.0-10.10_all.deb ... 408s Unpacking linux-headers-6.14.0-10 (6.14.0-10.10) ... 411s Selecting previously unselected package linux-headers-6.14.0-10-generic. 411s Preparing to unpack .../60-linux-headers-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 411s Unpacking linux-headers-6.14.0-10-generic (6.14.0-10.10) ... 412s Preparing to unpack .../61-linux-headers-generic_6.14.0-10.10_amd64.deb ... 412s Unpacking linux-headers-generic (6.14.0-10.10) over (6.12.0-16.16+2) ... 412s Preparing to unpack .../62-linux-libc-dev_6.14.0-10.10_amd64.deb ... 412s Unpacking linux-libc-dev:amd64 (6.14.0-10.10) over (6.12.0-16.16) ... 412s Selecting previously unselected package linux-perf. 412s Preparing to unpack .../63-linux-perf_6.14.0-10.10_amd64.deb ... 412s Unpacking linux-perf (6.14.0-10.10) ... 412s Selecting previously unselected package linux-tools-6.14.0-10. 412s Preparing to unpack .../64-linux-tools-6.14.0-10_6.14.0-10.10_amd64.deb ... 412s Unpacking linux-tools-6.14.0-10 (6.14.0-10.10) ... 412s Selecting previously unselected package linux-tools-6.14.0-10-generic. 412s Preparing to unpack .../65-linux-tools-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 412s Unpacking linux-tools-6.14.0-10-generic (6.14.0-10.10) ... 412s Preparing to unpack .../66-pinentry-curses_1.3.1-2ubuntu3_amd64.deb ... 412s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 413s Preparing to unpack .../67-python3-lazr.uri_1.0.6-6_all.deb ... 413s Unpacking python3-lazr.uri (1.0.6-6) over (1.0.6-5) ... 413s Preparing to unpack .../68-python3-systemd_235-1build6_amd64.deb ... 413s Unpacking python3-systemd (235-1build6) over (235-1build5) ... 413s Preparing to unpack .../69-python3.13-gdbm_3.13.2-2_amd64.deb ... 413s Unpacking python3.13-gdbm (3.13.2-2) over (3.13.2-1) ... 413s Preparing to unpack .../70-cloud-init_25.1-0ubuntu3_all.deb ... 413s Unpacking cloud-init (25.1-0ubuntu3) over (25.1-0ubuntu2) ... 413s Setting up linux-headers-6.14.0-10 (6.14.0-10.10) ... 413s Setting up media-types (13.0.0) ... 413s Installing new version of config file /etc/mime.types ... 413s Setting up linux-headers-6.14.0-10-generic (6.14.0-10.10) ... 413s Setting up libapparmor1:amd64 (4.1.0~beta5-0ubuntu8) ... 413s Setting up pci.ids (0.0~2025.03.09-1) ... 413s Setting up apt-utils (2.9.33) ... 413s Setting up libdebuginfod-common (0.192-4) ... 413s Setting up linux-firmware (20250310.git9e1370d3-0ubuntu1) ... 413s Setting up bpftool (7.6.0+6.14.0-10.10) ... 413s Setting up libestr0:amd64 (0.1.11-2) ... 413s Setting up libbrotli1:amd64 (1.1.0-2build4) ... 413s Setting up libsqlite3-0:amd64 (3.46.1-2) ... 413s Setting up dosfstools (4.2-1.2) ... 413s Setting up rsyslog (8.2412.0-2ubuntu2) ... 413s info: The user `syslog' is already a member of `adm'. 414s Setting up binutils-common:amd64 (2.44-3ubuntu1) ... 414s Setting up libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) ... 414s Setting up linux-libc-dev:amd64 (6.14.0-10.10) ... 414s Setting up libctf-nobfd0:amd64 (2.44-3ubuntu1) ... 414s Setting up linux-headers-generic (6.14.0-10.10) ... 414s Setting up libjemalloc2:amd64 (5.3.0-3) ... 414s Setting up libsframe1:amd64 (2.44-3ubuntu1) ... 414s Setting up libpython3.13-minimal:amd64 (3.13.2-2) ... 414s Setting up apparmor (4.1.0~beta5-0ubuntu8) ... 414s Installing new version of config file /etc/apparmor.d/openvpn ... 415s Reloading AppArmor profiles 417s Setting up libglib2.0-0t64:amd64 (2.84.0-1) ... 417s No schema files found: doing nothing. 417s Setting up libglib2.0-data (2.84.0-1) ... 417s Setting up libncurses6:amd64 (6.5+20250216-2) ... 417s Setting up strace (6.13+ds-1ubuntu1) ... 417s Setting up xz-utils (5.6.4-1) ... 417s Setting up gir1.2-glib-2.0:amd64 (2.84.0-1) ... 417s Setting up linux-modules-6.14.0-10-generic (6.14.0-10.10) ... 419s Setting up libncursesw6:amd64 (6.5+20250216-2) ... 419s Setting up libpci3:amd64 (1:3.13.0-2) ... 419s Setting up python-apt-common (2.9.9build1) ... 419s Setting up libmm-glib0:amd64 (1.23.4-0ubuntu3) ... 419s Setting up pnp.ids (0.393-3) ... 419s Setting up libnl-3-200:amd64 (3.7.0-1) ... 419s Setting up python3.13-minimal (3.13.2-2) ... 419s Setting up libgirepository-1.0-1:amd64 (1.83.4-1) ... 419s Setting up libbinutils:amd64 (2.44-3ubuntu1) ... 419s Setting up libpython3.13-stdlib:amd64 (3.13.2-2) ... 419s Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2ubuntu5) ... 419s Setting up rsync (3.4.1+ds1-3) ... 420s rsync.service is a disabled or a static unit not running, not starting it. 420s Setting up python3.13-gdbm (3.13.2-2) ... 420s Setting up libpython3-stdlib:amd64 (3.13.2-2) ... 420s Setting up ncurses-term (6.5+20250216-2) ... 420s Setting up libctf0:amd64 (2.44-3ubuntu1) ... 420s Setting up libpython3.13:amd64 (3.13.2-2) ... 420s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 420s Setting up libdebuginfod1t64:amd64 (0.192-4) ... 420s Setting up linux-headers-virtual (6.14.0-10.10) ... 420s Setting up libcurl4t64:amd64 (8.12.1-3ubuntu1) ... 420s Setting up python3.13 (3.13.2-2) ... 421s Setting up htop (3.4.0-2) ... 421s Setting up linux-image-6.14.0-10-generic (6.14.0-10.10) ... 423s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.12.0-16-generic 423s I: /boot/initrd.img.old is now a symlink to initrd.img-6.12.0-16-generic 423s I: /boot/vmlinuz is now a symlink to vmlinuz-6.14.0-10-generic 423s I: /boot/initrd.img is now a symlink to initrd.img-6.14.0-10-generic 423s Setting up libfwupd3:amd64 (2.0.6-4) ... 423s Setting up python3 (3.13.2-2) ... 423s Setting up python3-markupsafe (2.1.5-1build4) ... 424s Setting up linux-modules-extra-6.14.0-10-generic (6.14.0-10.10) ... 425s Setting up libnl-route-3-200:amd64 (3.7.0-1) ... 425s Setting up hwdata (0.393-3) ... 425s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 426s Setting up libgprofng0:amd64 (2.44-3ubuntu1) ... 426s Setting up linux-perf (6.14.0-10.10) ... 426s Setting up gir1.2-girepository-2.0:amd64 (1.83.4-1) ... 426s Setting up python3-gi (3.50.0-4build1) ... 426s Setting up pciutils (1:3.13.0-2) ... 426s Setting up libnl-genl-3-200:amd64 (3.7.0-1) ... 426s Setting up curl (8.12.1-3ubuntu1) ... 426s Setting up linux-image-virtual (6.14.0-10.10) ... 426s Setting up linux-tools-common (6.14.0-10.10) ... 426s Setting up fwupd (2.0.6-4) ... 426s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 426s fwupd.service is a disabled or a static unit not running, not starting it. 426s Setting up python3-systemd (235-1build6) ... 426s Setting up python3-cffi-backend:amd64 (1.17.1-2build2) ... 426s Setting up binutils-x86-64-linux-gnu (2.44-3ubuntu1) ... 426s Setting up linux-image-generic (6.14.0-10.10) ... 426s Setting up python3-dbus (1.3.2-5build5) ... 427s Setting up linux-tools-6.14.0-10 (6.14.0-10.10) ... 427s Setting up linux-generic (6.14.0-10.10) ... 427s Setting up python3-apt (2.9.9build1) ... 427s Setting up python3-yaml (6.0.2-1build2) ... 427s Setting up python3-lazr.uri (1.0.6-6) ... 427s Setting up binutils (2.44-3ubuntu1) ... 427s Setting up cloud-init-base (25.1-0ubuntu3) ... 428s Setting up linux-virtual (6.14.0-10.10) ... 428s Setting up linux-tools-6.14.0-10-generic (6.14.0-10.10) ... 428s Setting up cloud-init (25.1-0ubuntu3) ... 428s Processing triggers for systemd (257.3-1ubuntu3) ... 429s Processing triggers for man-db (2.13.0-1) ... 430s Processing triggers for dbus (1.16.2-1ubuntu1) ... 430s Processing triggers for libc-bin (2.41-1ubuntu1) ... 430s Processing triggers for initramfs-tools (0.146ubuntu1) ... 430s update-initramfs: Generating /boot/initrd.img-6.12.0-16-generic 430s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 440s Processing triggers for linux-image-6.14.0-10-generic (6.14.0-10.10) ... 440s /etc/kernel/postinst.d/initramfs-tools: 440s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 440s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 450s /etc/kernel/postinst.d/zz-update-grub: 450s Sourcing file `/etc/default/grub' 450s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 450s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 450s Generating grub configuration file ... 450s Found linux image: /boot/vmlinuz-6.14.0-10-generic 450s Found initrd image: /boot/initrd.img-6.14.0-10-generic 451s Found linux image: /boot/vmlinuz-6.12.0-16-generic 451s Found initrd image: /boot/initrd.img-6.12.0-16-generic 451s Found linux image: /boot/vmlinuz-6.11.0-8-generic 451s Found initrd image: /boot/initrd.img-6.11.0-8-generic 451s Warning: os-prober will not be executed to detect other bootable partitions. 451s Systems on them will not be added to the GRUB boot configuration. 451s Check GRUB_DISABLE_OS_PROBER documentation entry. 451s Adding boot menu entry for UEFI Firmware Settings ... 451s done 451s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 451s + /usr/lib/apt/apt-helper analyze-pattern ?true 451s + uname -r 451s + sed s/\./\\./g 451s + running_kernel_pattern=^linux-.*6\.12\.0-16-generic.* 451s + apt list ?obsolete 451s + tail -n+2 451s + grep -v ^linux-.*6\.12\.0-16-generic.* 451s + cut -d/ -f1 452s + obsolete_pkgs=linux-headers-6.11.0-8-generic 452s linux-headers-6.11.0-8 452s linux-headers-6.12.0-16 452s linux-image-6.11.0-8-generic 452s linux-modules-6.11.0-8-generic 452s linux-tools-6.11.0-8-generic 452s linux-tools-6.11.0-8 452s linux-tools-6.12.0-16 452s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove linux-headers-6.11.0-8-generic linux-headers-6.11.0-8 linux-headers-6.12.0-16 linux-image-6.11.0-8-generic linux-modules-6.11.0-8-generic linux-tools-6.11.0-8-generic linux-tools-6.11.0-8 linux-tools-6.12.0-16 452s Reading package lists... 453s Building dependency tree... 453s Reading state information... 453s Solving dependencies... 453s The following packages will be REMOVED: 453s libnl-genl-3-200* libnsl2* libpython3.12-minimal* libpython3.12-stdlib* 453s libpython3.12t64* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 453s linux-headers-6.12.0-16* linux-headers-6.12.0-16-generic* 453s linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic* 453s linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic* linux-tools-6.12.0-16* 453s linux-tools-6.12.0-16-generic* 453s 0 upgraded, 0 newly installed, 15 to remove and 5 not upgraded. 453s After this operation, 371 MB disk space will be freed. 453s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 148643 files and directories currently installed.) 453s Removing libnl-genl-3-200:amd64 (3.7.0-1) ... 453s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 453s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 453s Removing libpython3.12t64:amd64 (3.12.9-1) ... 453s Removing libpython3.12-stdlib:amd64 (3.12.9-1) ... 453s Removing libnsl2:amd64 (1.3.0-3build3) ... 453s Removing libpython3.12-minimal:amd64 (3.12.9-1) ... 454s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 454s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 456s Removing linux-headers-6.12.0-16-generic (6.12.0-16.16) ... 457s Removing linux-headers-6.12.0-16 (6.12.0-16.16) ... 458s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 458s /etc/kernel/postrm.d/initramfs-tools: 458s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 459s /etc/kernel/postrm.d/zz-update-grub: 459s Sourcing file `/etc/default/grub' 459s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 459s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 459s Generating grub configuration file ... 459s Found linux image: /boot/vmlinuz-6.14.0-10-generic 459s Found initrd image: /boot/initrd.img-6.14.0-10-generic 459s Found linux image: /boot/vmlinuz-6.12.0-16-generic 459s Found initrd image: /boot/initrd.img-6.12.0-16-generic 459s Warning: os-prober will not be executed to detect other bootable partitions. 459s Systems on them will not be added to the GRUB boot configuration. 459s Check GRUB_DISABLE_OS_PROBER documentation entry. 459s Adding boot menu entry for UEFI Firmware Settings ... 459s done 459s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 459s Removing linux-tools-6.12.0-16-generic (6.12.0-16.16) ... 459s Removing linux-tools-6.12.0-16 (6.12.0-16.16) ... 459s Processing triggers for libc-bin (2.41-1ubuntu1) ... 459s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84830 files and directories currently installed.) 459s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 460s Purging configuration files for libpython3.12-minimal:amd64 (3.12.9-1) ... 460s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 460s + grep -q trusty /etc/lsb-release 460s + [ ! -d /usr/share/doc/unattended-upgrades ] 460s + [ ! -d /usr/share/doc/lxd ] 460s + [ ! -d /usr/share/doc/lxd-client ] 460s + [ ! -d /usr/share/doc/snapd ] 460s + type iptables 460s + cat 460s + chmod 755 /etc/rc.local 460s + . /etc/rc.local 460s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 460s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 460s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 460s + uname -m 460s + [ x86_64 = ppc64le ] 460s + [ -d /run/systemd/system ] 460s + systemd-detect-virt --quiet --vm 460s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 460s + cat 460s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 460s + echo COMPRESS=lz4 460s autopkgtest [22:11:05]: upgrading testbed (apt dist-upgrade and autopurge) 460s Reading package lists... 460s Building dependency tree... 460s Reading state information... 461s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 461s Starting 2 pkgProblemResolver with broken count: 0 461s Done 461s Entering ResolveByKeep 462s 462s Calculating upgrade... 462s The following packages will be upgraded: 462s libc-bin libc-dev-bin libc6 libc6-dev locales 462s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 462s Need to get 10.5 MB of archives. 462s After this operation, 1024 B of additional disk space will be used. 462s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6-dev amd64 2.41-1ubuntu2 [2183 kB] 462s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-dev-bin amd64 2.41-1ubuntu2 [24.7 kB] 462s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6 amd64 2.41-1ubuntu2 [3327 kB] 462s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-bin amd64 2.41-1ubuntu2 [700 kB] 462s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 locales all 2.41-1ubuntu2 [4246 kB] 462s Preconfiguring packages ... 462s Fetched 10.5 MB in 0s (54.5 MB/s) 462s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84827 files and directories currently installed.) 462s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_amd64.deb ... 462s Unpacking libc6-dev:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 463s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_amd64.deb ... 463s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 463s Preparing to unpack .../libc6_2.41-1ubuntu2_amd64.deb ... 463s Unpacking libc6:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 463s Setting up libc6:amd64 (2.41-1ubuntu2) ... 463s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84827 files and directories currently installed.) 463s Preparing to unpack .../libc-bin_2.41-1ubuntu2_amd64.deb ... 463s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 463s Setting up libc-bin (2.41-1ubuntu2) ... 463s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84827 files and directories currently installed.) 463s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 463s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 464s Setting up locales (2.41-1ubuntu2) ... 464s Generating locales (this might take a while)... 466s en_US.UTF-8... done 466s Generation complete. 466s Setting up libc-dev-bin (2.41-1ubuntu2) ... 466s Setting up libc6-dev:amd64 (2.41-1ubuntu2) ... 466s Processing triggers for man-db (2.13.0-1) ... 466s Processing triggers for systemd (257.3-1ubuntu3) ... 467s Reading package lists... 467s Building dependency tree... 467s Reading state information... 468s Starting pkgProblemResolver with broken count: 0 468s Starting 2 pkgProblemResolver with broken count: 0 468s Done 468s Solving dependencies... 468s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 468s autopkgtest [22:11:13]: rebooting testbed after setup commands that affected boot 472s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 484s Reading package lists... 485s Building dependency tree... 485s Reading state information... 485s Starting pkgProblemResolver with broken count: 0 485s Starting 2 pkgProblemResolver with broken count: 0 485s Done 486s The following NEW packages will be installed: 486s build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu 486s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 486s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-14 486s g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 486s gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-14 486s gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools 486s javascript-common libaec0 libamd3 libasan8 libblas-dev libblas3 libboost-dev 486s libboost1.83-dev libbz2-dev libcairo2 libcc1-0 libcolamd3 libdatrie1 486s libdeflate-dev libdeflate0 libfontconfig1 libgcc-14-dev libgfortran-14-dev 486s libgfortran5 libglpk40 libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-310 486s libhdf5-hl-310 libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 486s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 486s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 486s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 486s libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js 486s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 486s libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 liblerc4 486s liblsan0 libltdl7 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev libnetcdf22 486s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 486s libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 486s libpixman-1-0 libpkgconf3 libpng-dev libquadmath0 libreadline-dev 486s libsharpyuv0 libsm6 libstdc++-14-dev libsuitesparseconfig7 libsz2 libtcl8.6 486s libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 486s libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 486s littler node-bootstrap-sass node-html5shiv node-normalize.css pandoc 486s pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 486s r-bioc-biocgenerics r-bioc-biostrings r-bioc-genomeinfodb 486s r-bioc-genomeinfodbdata r-bioc-iranges r-bioc-s4vectors r-bioc-ucsc.utils 486s r-bioc-xvector r-bioc-zlibbioc r-cran-askpass r-cran-base64enc r-cran-bh 486s r-cran-bigmemory r-cran-bigmemory.sri r-cran-bio3d r-cran-bitops r-cran-brio 486s r-cran-bslib r-cran-cachem r-cran-callr r-cran-cli r-cran-commonmark 486s r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-desc r-cran-diffobj 486s r-cran-digest r-cran-evaluate r-cran-fastmap r-cran-fontawesome r-cran-fs 486s r-cran-glue r-cran-highr r-cran-htmltools r-cran-httpuv r-cran-httr 486s r-cran-igraph r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-later 486s r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-matrix 486s r-cran-memoise r-cran-mime r-cran-ncdf4 r-cran-openssl r-cran-pkgbuild 486s r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-praise 486s r-cran-processx r-cran-promises r-cran-ps r-cran-r6 r-cran-rappdirs 486s r-cran-rcpp r-cran-rcurl r-cran-rlang r-cran-rmarkdown r-cran-rprojroot 486s r-cran-sass r-cran-shiny r-cran-sourcetools r-cran-sys r-cran-testthat 486s r-cran-tinytex r-cran-uuid r-cran-vctrs r-cran-waldo r-cran-withr 486s r-cran-xfun r-cran-xml r-cran-xtable r-cran-yaml unzip x11-common xdg-utils 486s zip zlib1g-dev 486s 0 upgraded, 219 newly installed, 0 to remove and 0 not upgraded. 486s Need to get 280 MB of archives. 486s After this operation, 1022 MB of additional disk space will be used. 486s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 486s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 486s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [11.9 MB] 486s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-17ubuntu3 [1030 B] 486s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [5586 B] 486s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.2.0-1ubuntu1 [22.4 kB] 486s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 15-20250222-0ubuntu1 [47.0 kB] 486s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 15-20250222-0ubuntu1 [148 kB] 486s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 15-20250222-0ubuntu1 [28.6 kB] 486s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 15-20250222-0ubuntu1 [3055 kB] 486s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 15-20250222-0ubuntu1 [1355 kB] 486s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 15-20250222-0ubuntu1 [2756 kB] 486s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 15-20250222-0ubuntu1 [1205 kB] 486s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 15-20250222-0ubuntu1 [1677 kB] 486s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 15-20250222-0ubuntu1 [152 kB] 486s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-17ubuntu3 [2816 kB] 486s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [23.3 MB] 486s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-17ubuntu3 [536 kB] 486s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1208 B] 486s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.2.0-1ubuntu1 [5004 B] 486s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-17ubuntu3 [2486 kB] 486s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [13.4 MB] 486s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-17ubuntu3 [21.8 kB] 486s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [968 B] 486s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.2.0-1ubuntu1 [1100 B] 486s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 486s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 dctrl-tools amd64 2.24-3build3 [106 kB] 486s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 486s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 486s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-2ubuntu1 [37.4 kB] 486s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-2ubuntu1 [164 kB] 486s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-2ubuntu1 [180 kB] 486s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 486s Get:34 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 486s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 486s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 15-20250222-0ubuntu1 [919 kB] 486s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran-14-dev amd64 14.2.0-17ubuntu3 [966 kB] 486s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [12.6 MB] 486s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14 amd64 14.2.0-17ubuntu3 [13.6 kB] 486s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1022 B] 486s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran amd64 4:14.2.0-1ubuntu1 [1174 B] 486s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 icu-devtools amd64 76.1-1ubuntu2 [237 kB] 486s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 12 [5216 B] 486s Get:44 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 486s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libsuitesparseconfig7 amd64 1:7.8.3+dfsg-3 [13.5 kB] 486s Get:46 http://ftpmaster.internal/ubuntu plucky/universe amd64 libamd3 amd64 1:7.8.3+dfsg-3 [31.0 kB] 486s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 486s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas-dev amd64 3.12.1-2 [338 kB] 486s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost1.83-dev amd64 1.83.0-4.1ubuntu2 [10.7 MB] 486s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost-dev amd64 1.83.0.2ubuntu1 [4468 B] 486s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libbz2-dev amd64 1.0.8-6 [33.8 kB] 486s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 486s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 486s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 486s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 486s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 486s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libcolamd3 amd64 1:7.8.3+dfsg-3 [19.5 kB] 486s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 486s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB] 486s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate-dev amd64 1.23-1 [71.7 kB] 486s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl7 amd64 2.5.4-4 [46.5 kB] 486s Get:62 http://ftpmaster.internal/ubuntu plucky/universe amd64 libglpk40 amd64 5.0-1build2 [369 kB] 486s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 486s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB] 486s Get:65 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 486s Get:66 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-310 amd64 1.14.5+repack-3 [1519 kB] 486s Get:67 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-310 amd64 1.14.5+repack-3 [62.6 kB] 486s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 486s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 486s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 libicu-dev amd64 76.1-1ubuntu2 [12.6 MB] 486s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 486s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8-dev amd64 2.1.5-3ubuntu2 [324 kB] 486s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 486s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 486s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 486s Get:76 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 486s Get:77 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 486s Get:78 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 486s Get:79 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 486s Get:80 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 486s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 486s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 486s Get:83 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 486s Get:84 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 486s Get:85 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 486s Get:86 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 486s Get:87 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 486s Get:88 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 486s Get:89 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 486s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 487s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack-dev amd64 3.12.1-2 [6489 kB] 487s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 487s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 liblua5.4-0 amd64 5.4.7-1 [196 kB] 487s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses-dev amd64 6.5+20250216-2 [424 kB] 487s Get:95 http://ftpmaster.internal/ubuntu plucky/universe amd64 libnetcdf22 amd64 1:4.9.3-1 [574 kB] 487s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 487s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 487s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.56.2-1 [255 kB] 487s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.56.2-1 [52.6 kB] 487s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.56.2-1 [29.1 kB] 487s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB] 487s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB] 487s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.45-1 [268 kB] 487s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-32-0 amd64 10.45-1 [251 kB] 487s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-posix3 amd64 10.45-1 [7204 B] 487s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-dev amd64 10.45-1 [908 kB] 487s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libpkgconf3 amd64 1.8.1-4 [32.3 kB] 487s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 487s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 libpng-dev amd64 1.6.47-1 [298 kB] 487s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 libreadline-dev amd64 8.2-6 [184 kB] 487s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 487s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 487s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB] 487s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 487s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 487s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 487s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 487s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 487s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB] 487s Get:120 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 487s Get:121 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu2 [185 kB] 487s Get:122 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 487s Get:123 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 487s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.3-1 [28.9 MB] 487s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-2 [96.6 kB] 487s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-2 [2554 B] 487s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 487s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 487s Get:129 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 487s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 487s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc amd64 3.1.11.1+ds-2 [27.2 MB] 487s Get:132 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma-dev amd64 5.6.4-1 [189 kB] 487s Get:133 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf-bin amd64 1.8.1-4 [21.6 kB] 487s Get:134 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf amd64 1.8.1-4 [16.8 kB] 487s Get:135 http://ftpmaster.internal/ubuntu plucky/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3 [193 kB] 487s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-dev all 4.4.3-1 [4176 B] 487s Get:137 http://ftpmaster.internal/ubuntu plucky/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 487s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 487s Get:139 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2065 kB] 487s Get:140 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-iranges amd64 2.40.1-2 [2310 kB] 487s Get:141 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 487s Get:142 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-xvector amd64 0.46.0-2 [620 kB] 487s Get:143 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-curl amd64 6.2.1+dfsg-1ubuntu1 [197 kB] 487s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB] 487s Get:145 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 487s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB] 487s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB] 487s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-openssl amd64 2.3.2+dfsg-1 [407 kB] 487s Get:149 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB] 487s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 487s Get:151 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 487s Get:152 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 487s Get:153 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 487s Get:154 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB] 487s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biostrings amd64 2.74.1+dfsg-2 [13.3 MB] 487s Get:156 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 487s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bh all 1.84.0-1 [5962 B] 487s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bigmemory.sri all 0.1.8-1 [13.4 kB] 487s Get:159 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 487s Get:160 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.14-1 [1998 kB] 487s Get:161 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-uuid amd64 1.2-1-1 [48.5 kB] 487s Get:162 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bigmemory amd64 4.6.4-1ubuntu1 [499 kB] 487s Get:163 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bio3d amd64 2.4-5-1 [3028 kB] 487s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bitops amd64 1.0-9-1 [30.3 kB] 487s Get:165 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 487s Get:166 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.5-1 [1719 kB] 487s Get:167 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 487s Get:168 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 487s Get:169 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB] 487s Get:170 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 487s Get:171 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 487s Get:172 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB] 488s Get:173 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 488s Get:174 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 488s Get:175 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 488s Get:176 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB] 488s Get:177 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 488s Get:178 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 488s Get:179 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 488s Get:180 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ps amd64 1.9.0-1 [408 kB] 488s Get:181 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-processx amd64 3.8.6-1 [365 kB] 488s Get:182 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 488s Get:183 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.2-2 [137 kB] 488s Get:184 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cpp11 all 0.5.2-1 [233 kB] 488s Get:185 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 488s Get:186 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 488s Get:187 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 1.0.3-1 [114 kB] 488s Get:188 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 488s Get:189 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xfun amd64 0.51+dfsg-1 [574 kB] 488s Get:190 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 488s Get:191 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB] 488s Get:192 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 488s Get:193 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB] 488s Get:194 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 488s Get:195 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 488s Get:196 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrix amd64 1.7-3-1 [4349 kB] 488s Get:197 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 488s Get:198 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 488s Get:199 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-igraph amd64 2.1.4-1 [5357 kB] 488s Get:200 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB] 488s Get:201 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 488s Get:202 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 488s Get:203 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ncdf4 amd64 1.23-1build1 [279 kB] 488s Get:204 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgbuild all 1.4.6-1 [213 kB] 488s Get:205 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rprojroot all 2.0.4-2 [125 kB] 488s Get:206 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 488s Get:207 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgload all 1.4.0-1 [247 kB] 488s Get:208 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 488s Get:209 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcurl amd64 1.98-1.16+dfsg-1 [807 kB] 488s Get:210 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tinytex all 0.56-1 [148 kB] 488s Get:211 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-modernizr all 3.13.0-0.1 [101 kB] 488s Get:212 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 488s Get:213 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 488s Get:214 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 488s Get:215 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 488s Get:216 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 488s Get:217 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-waldo all 0.6.1-2 [150 kB] 488s Get:218 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-testthat amd64 3.2.3-1 [1651 kB] 488s Get:219 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xml amd64 3.99-0.18-1 [1748 kB] 488s Preconfiguring packages ... 489s Fetched 280 MB in 2s (127 MB/s) 489s Selecting previously unselected package libisl23:amd64. 489s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84827 files and directories currently installed.) 489s Preparing to unpack .../000-libisl23_0.27-1_amd64.deb ... 489s Unpacking libisl23:amd64 (0.27-1) ... 489s Selecting previously unselected package libmpc3:amd64. 489s Preparing to unpack .../001-libmpc3_1.3.1-1build2_amd64.deb ... 489s Unpacking libmpc3:amd64 (1.3.1-1build2) ... 489s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 489s Preparing to unpack .../002-cpp-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 489s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 489s Selecting previously unselected package cpp-14. 489s Preparing to unpack .../003-cpp-14_14.2.0-17ubuntu3_amd64.deb ... 489s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 489s Selecting previously unselected package cpp-x86-64-linux-gnu. 489s Preparing to unpack .../004-cpp-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 489s Unpacking cpp-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 489s Selecting previously unselected package cpp. 489s Preparing to unpack .../005-cpp_4%3a14.2.0-1ubuntu1_amd64.deb ... 489s Unpacking cpp (4:14.2.0-1ubuntu1) ... 489s Selecting previously unselected package libcc1-0:amd64. 489s Preparing to unpack .../006-libcc1-0_15-20250222-0ubuntu1_amd64.deb ... 489s Unpacking libcc1-0:amd64 (15-20250222-0ubuntu1) ... 489s Selecting previously unselected package libgomp1:amd64. 489s Preparing to unpack .../007-libgomp1_15-20250222-0ubuntu1_amd64.deb ... 489s Unpacking libgomp1:amd64 (15-20250222-0ubuntu1) ... 489s Selecting previously unselected package libitm1:amd64. 489s Preparing to unpack .../008-libitm1_15-20250222-0ubuntu1_amd64.deb ... 489s Unpacking libitm1:amd64 (15-20250222-0ubuntu1) ... 489s Selecting previously unselected package libasan8:amd64. 489s Preparing to unpack .../009-libasan8_15-20250222-0ubuntu1_amd64.deb ... 489s Unpacking libasan8:amd64 (15-20250222-0ubuntu1) ... 489s Selecting previously unselected package liblsan0:amd64. 489s Preparing to unpack .../010-liblsan0_15-20250222-0ubuntu1_amd64.deb ... 489s Unpacking liblsan0:amd64 (15-20250222-0ubuntu1) ... 489s Selecting previously unselected package libtsan2:amd64. 489s Preparing to unpack .../011-libtsan2_15-20250222-0ubuntu1_amd64.deb ... 489s Unpacking libtsan2:amd64 (15-20250222-0ubuntu1) ... 489s Selecting previously unselected package libubsan1:amd64. 489s Preparing to unpack .../012-libubsan1_15-20250222-0ubuntu1_amd64.deb ... 489s Unpacking libubsan1:amd64 (15-20250222-0ubuntu1) ... 489s Selecting previously unselected package libhwasan0:amd64. 489s Preparing to unpack .../013-libhwasan0_15-20250222-0ubuntu1_amd64.deb ... 489s Unpacking libhwasan0:amd64 (15-20250222-0ubuntu1) ... 490s Selecting previously unselected package libquadmath0:amd64. 490s Preparing to unpack .../014-libquadmath0_15-20250222-0ubuntu1_amd64.deb ... 490s Unpacking libquadmath0:amd64 (15-20250222-0ubuntu1) ... 490s Selecting previously unselected package libgcc-14-dev:amd64. 490s Preparing to unpack .../015-libgcc-14-dev_14.2.0-17ubuntu3_amd64.deb ... 490s Unpacking libgcc-14-dev:amd64 (14.2.0-17ubuntu3) ... 490s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 490s Preparing to unpack .../016-gcc-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 490s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 490s Selecting previously unselected package gcc-14. 490s Preparing to unpack .../017-gcc-14_14.2.0-17ubuntu3_amd64.deb ... 490s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 490s Selecting previously unselected package gcc-x86-64-linux-gnu. 490s Preparing to unpack .../018-gcc-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 490s Unpacking gcc-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 490s Selecting previously unselected package gcc. 490s Preparing to unpack .../019-gcc_4%3a14.2.0-1ubuntu1_amd64.deb ... 490s Unpacking gcc (4:14.2.0-1ubuntu1) ... 490s Selecting previously unselected package libstdc++-14-dev:amd64. 490s Preparing to unpack .../020-libstdc++-14-dev_14.2.0-17ubuntu3_amd64.deb ... 490s Unpacking libstdc++-14-dev:amd64 (14.2.0-17ubuntu3) ... 490s Selecting previously unselected package g++-14-x86-64-linux-gnu. 490s Preparing to unpack .../021-g++-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 490s Unpacking g++-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 491s Selecting previously unselected package g++-14. 491s Preparing to unpack .../022-g++-14_14.2.0-17ubuntu3_amd64.deb ... 491s Unpacking g++-14 (14.2.0-17ubuntu3) ... 491s Selecting previously unselected package g++-x86-64-linux-gnu. 491s Preparing to unpack .../023-g++-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 491s Unpacking g++-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 491s Selecting previously unselected package g++. 491s Preparing to unpack .../024-g++_4%3a14.2.0-1ubuntu1_amd64.deb ... 491s Unpacking g++ (4:14.2.0-1ubuntu1) ... 491s Selecting previously unselected package build-essential. 491s Preparing to unpack .../025-build-essential_12.10ubuntu1_amd64.deb ... 491s Unpacking build-essential (12.10ubuntu1) ... 491s Selecting previously unselected package dctrl-tools. 491s Preparing to unpack .../026-dctrl-tools_2.24-3build3_amd64.deb ... 491s Unpacking dctrl-tools (2.24-3build3) ... 491s Selecting previously unselected package fonts-dejavu-mono. 491s Preparing to unpack .../027-fonts-dejavu-mono_2.37-8_all.deb ... 491s Unpacking fonts-dejavu-mono (2.37-8) ... 491s Selecting previously unselected package fonts-dejavu-core. 491s Preparing to unpack .../028-fonts-dejavu-core_2.37-8_all.deb ... 491s Unpacking fonts-dejavu-core (2.37-8) ... 491s Selecting previously unselected package fontconfig-config. 491s Preparing to unpack .../029-fontconfig-config_2.15.0-2ubuntu1_amd64.deb ... 491s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 491s Selecting previously unselected package libfontconfig1:amd64. 491s Preparing to unpack .../030-libfontconfig1_2.15.0-2ubuntu1_amd64.deb ... 491s Unpacking libfontconfig1:amd64 (2.15.0-2ubuntu1) ... 491s Selecting previously unselected package fontconfig. 491s Preparing to unpack .../031-fontconfig_2.15.0-2ubuntu1_amd64.deb ... 491s Unpacking fontconfig (2.15.0-2ubuntu1) ... 491s Selecting previously unselected package fonts-font-awesome. 491s Preparing to unpack .../032-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 491s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 491s Selecting previously unselected package fonts-glyphicons-halflings. 491s Preparing to unpack .../033-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 491s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 491s Selecting previously unselected package fonts-mathjax. 491s Preparing to unpack .../034-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 491s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 491s Selecting previously unselected package libgfortran5:amd64. 491s Preparing to unpack .../035-libgfortran5_15-20250222-0ubuntu1_amd64.deb ... 491s Unpacking libgfortran5:amd64 (15-20250222-0ubuntu1) ... 491s Selecting previously unselected package libgfortran-14-dev:amd64. 491s Preparing to unpack .../036-libgfortran-14-dev_14.2.0-17ubuntu3_amd64.deb ... 491s Unpacking libgfortran-14-dev:amd64 (14.2.0-17ubuntu3) ... 491s Selecting previously unselected package gfortran-14-x86-64-linux-gnu. 491s Preparing to unpack .../037-gfortran-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 491s Unpacking gfortran-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 492s Selecting previously unselected package gfortran-14. 492s Preparing to unpack .../038-gfortran-14_14.2.0-17ubuntu3_amd64.deb ... 492s Unpacking gfortran-14 (14.2.0-17ubuntu3) ... 492s Selecting previously unselected package gfortran-x86-64-linux-gnu. 492s Preparing to unpack .../039-gfortran-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 492s Unpacking gfortran-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 492s Selecting previously unselected package gfortran. 492s Preparing to unpack .../040-gfortran_4%3a14.2.0-1ubuntu1_amd64.deb ... 492s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 492s Selecting previously unselected package icu-devtools. 492s Preparing to unpack .../041-icu-devtools_76.1-1ubuntu2_amd64.deb ... 492s Unpacking icu-devtools (76.1-1ubuntu2) ... 492s Selecting previously unselected package javascript-common. 492s Preparing to unpack .../042-javascript-common_12_all.deb ... 492s Unpacking javascript-common (12) ... 492s Selecting previously unselected package libaec0:amd64. 492s Preparing to unpack .../043-libaec0_1.1.3-1_amd64.deb ... 492s Unpacking libaec0:amd64 (1.1.3-1) ... 492s Selecting previously unselected package libsuitesparseconfig7:amd64. 492s Preparing to unpack .../044-libsuitesparseconfig7_1%3a7.8.3+dfsg-3_amd64.deb ... 492s Unpacking libsuitesparseconfig7:amd64 (1:7.8.3+dfsg-3) ... 492s Selecting previously unselected package libamd3:amd64. 492s Preparing to unpack .../045-libamd3_1%3a7.8.3+dfsg-3_amd64.deb ... 492s Unpacking libamd3:amd64 (1:7.8.3+dfsg-3) ... 492s Selecting previously unselected package libblas3:amd64. 492s Preparing to unpack .../046-libblas3_3.12.1-2_amd64.deb ... 492s Unpacking libblas3:amd64 (3.12.1-2) ... 492s Selecting previously unselected package libblas-dev:amd64. 492s Preparing to unpack .../047-libblas-dev_3.12.1-2_amd64.deb ... 492s Unpacking libblas-dev:amd64 (3.12.1-2) ... 492s Selecting previously unselected package libboost1.83-dev:amd64. 492s Preparing to unpack .../048-libboost1.83-dev_1.83.0-4.1ubuntu2_amd64.deb ... 492s Unpacking libboost1.83-dev:amd64 (1.83.0-4.1ubuntu2) ... 494s Selecting previously unselected package libboost-dev:amd64. 494s Preparing to unpack .../049-libboost-dev_1.83.0.2ubuntu1_amd64.deb ... 494s Unpacking libboost-dev:amd64 (1.83.0.2ubuntu1) ... 494s Selecting previously unselected package libbz2-dev:amd64. 494s Preparing to unpack .../050-libbz2-dev_1.0.8-6_amd64.deb ... 494s Unpacking libbz2-dev:amd64 (1.0.8-6) ... 494s Selecting previously unselected package libpixman-1-0:amd64. 494s Preparing to unpack .../051-libpixman-1-0_0.44.0-3_amd64.deb ... 494s Unpacking libpixman-1-0:amd64 (0.44.0-3) ... 494s Selecting previously unselected package libxcb-render0:amd64. 494s Preparing to unpack .../052-libxcb-render0_1.17.0-2_amd64.deb ... 494s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 494s Selecting previously unselected package libxcb-shm0:amd64. 494s Preparing to unpack .../053-libxcb-shm0_1.17.0-2_amd64.deb ... 494s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 494s Selecting previously unselected package libxrender1:amd64. 494s Preparing to unpack .../054-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 494s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 494s Selecting previously unselected package libcairo2:amd64. 494s Preparing to unpack .../055-libcairo2_1.18.2-2_amd64.deb ... 494s Unpacking libcairo2:amd64 (1.18.2-2) ... 494s Selecting previously unselected package libcolamd3:amd64. 494s Preparing to unpack .../056-libcolamd3_1%3a7.8.3+dfsg-3_amd64.deb ... 494s Unpacking libcolamd3:amd64 (1:7.8.3+dfsg-3) ... 494s Selecting previously unselected package libdatrie1:amd64. 494s Preparing to unpack .../057-libdatrie1_0.2.13-3build1_amd64.deb ... 494s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 494s Selecting previously unselected package libdeflate0:amd64. 494s Preparing to unpack .../058-libdeflate0_1.23-1_amd64.deb ... 494s Unpacking libdeflate0:amd64 (1.23-1) ... 494s Selecting previously unselected package libdeflate-dev:amd64. 494s Preparing to unpack .../059-libdeflate-dev_1.23-1_amd64.deb ... 494s Unpacking libdeflate-dev:amd64 (1.23-1) ... 494s Selecting previously unselected package libltdl7:amd64. 494s Preparing to unpack .../060-libltdl7_2.5.4-4_amd64.deb ... 494s Unpacking libltdl7:amd64 (2.5.4-4) ... 495s Selecting previously unselected package libglpk40:amd64. 495s Preparing to unpack .../061-libglpk40_5.0-1build2_amd64.deb ... 495s Unpacking libglpk40:amd64 (5.0-1build2) ... 495s Selecting previously unselected package libgraphite2-3:amd64. 495s Preparing to unpack .../062-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 495s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 495s Selecting previously unselected package libharfbuzz0b:amd64. 495s Preparing to unpack .../063-libharfbuzz0b_10.2.0-1_amd64.deb ... 495s Unpacking libharfbuzz0b:amd64 (10.2.0-1) ... 495s Selecting previously unselected package libsz2:amd64. 495s Preparing to unpack .../064-libsz2_1.1.3-1_amd64.deb ... 495s Unpacking libsz2:amd64 (1.1.3-1) ... 495s Selecting previously unselected package libhdf5-310:amd64. 495s Preparing to unpack .../065-libhdf5-310_1.14.5+repack-3_amd64.deb ... 495s Unpacking libhdf5-310:amd64 (1.14.5+repack-3) ... 495s Selecting previously unselected package libhdf5-hl-310:amd64. 495s Preparing to unpack .../066-libhdf5-hl-310_1.14.5+repack-3_amd64.deb ... 495s Unpacking libhdf5-hl-310:amd64 (1.14.5+repack-3) ... 495s Selecting previously unselected package x11-common. 495s Preparing to unpack .../067-x11-common_1%3a7.7+23ubuntu3_all.deb ... 495s Unpacking x11-common (1:7.7+23ubuntu3) ... 495s Selecting previously unselected package libice6:amd64. 495s Preparing to unpack .../068-libice6_2%3a1.1.1-1_amd64.deb ... 495s Unpacking libice6:amd64 (2:1.1.1-1) ... 495s Selecting previously unselected package libicu-dev:amd64. 495s Preparing to unpack .../069-libicu-dev_76.1-1ubuntu2_amd64.deb ... 495s Unpacking libicu-dev:amd64 (76.1-1ubuntu2) ... 495s Selecting previously unselected package libjpeg-turbo8:amd64. 495s Preparing to unpack .../070-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ... 495s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 495s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 495s Preparing to unpack .../071-libjpeg-turbo8-dev_2.1.5-3ubuntu2_amd64.deb ... 495s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-3ubuntu2) ... 495s Selecting previously unselected package libjpeg8:amd64. 495s Preparing to unpack .../072-libjpeg8_8c-2ubuntu11_amd64.deb ... 495s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 495s Selecting previously unselected package libjpeg8-dev:amd64. 495s Preparing to unpack .../073-libjpeg8-dev_8c-2ubuntu11_amd64.deb ... 495s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu11) ... 495s Selecting previously unselected package libjpeg-dev:amd64. 495s Preparing to unpack .../074-libjpeg-dev_8c-2ubuntu11_amd64.deb ... 495s Unpacking libjpeg-dev:amd64 (8c-2ubuntu11) ... 495s Selecting previously unselected package libjs-bootstrap. 495s Preparing to unpack .../075-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 495s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 495s Selecting previously unselected package libjs-popper.js. 495s Preparing to unpack .../076-libjs-popper.js_1.16.1+ds-6_all.deb ... 495s Unpacking libjs-popper.js (1.16.1+ds-6) ... 495s Selecting previously unselected package libjs-bootstrap4. 495s Preparing to unpack .../077-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 495s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 495s Selecting previously unselected package libjs-d3. 495s Preparing to unpack .../078-libjs-d3_3.5.17-4_all.deb ... 495s Unpacking libjs-d3 (3.5.17-4) ... 495s Selecting previously unselected package libjs-es5-shim. 495s Preparing to unpack .../079-libjs-es5-shim_4.6.7-2_all.deb ... 495s Unpacking libjs-es5-shim (4.6.7-2) ... 495s Selecting previously unselected package libjs-highlight.js. 496s Preparing to unpack .../080-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 496s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 496s Selecting previously unselected package libjs-jquery. 496s Preparing to unpack .../081-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 496s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 496s Selecting previously unselected package libjs-jquery-datatables. 496s Preparing to unpack .../082-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 496s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 496s Selecting previously unselected package libjs-sifter.js. 496s Preparing to unpack .../083-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 496s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 496s Selecting previously unselected package libjs-microplugin.js. 496s Preparing to unpack .../084-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 496s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 496s Selecting previously unselected package libjs-jquery-selectize.js. 496s Preparing to unpack .../085-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 496s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 496s Selecting previously unselected package libjs-jquery-ui. 496s Preparing to unpack .../086-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 496s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 496s Selecting previously unselected package libjs-json. 496s Preparing to unpack .../087-libjs-json_0~20221030+~1.0.8-1_all.deb ... 496s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 496s Selecting previously unselected package libjs-prettify. 496s Preparing to unpack .../088-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 496s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 496s Selecting previously unselected package liblapack3:amd64. 496s Preparing to unpack .../089-liblapack3_3.12.1-2_amd64.deb ... 496s Unpacking liblapack3:amd64 (3.12.1-2) ... 496s Selecting previously unselected package liblapack-dev:amd64. 496s Preparing to unpack .../090-liblapack-dev_3.12.1-2_amd64.deb ... 496s Unpacking liblapack-dev:amd64 (3.12.1-2) ... 496s Selecting previously unselected package liblerc4:amd64. 496s Preparing to unpack .../091-liblerc4_4.0.0+ds-5ubuntu1_amd64.deb ... 496s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 496s Selecting previously unselected package liblua5.4-0:amd64. 496s Preparing to unpack .../092-liblua5.4-0_5.4.7-1_amd64.deb ... 496s Unpacking liblua5.4-0:amd64 (5.4.7-1) ... 496s Selecting previously unselected package libncurses-dev:amd64. 496s Preparing to unpack .../093-libncurses-dev_6.5+20250216-2_amd64.deb ... 496s Unpacking libncurses-dev:amd64 (6.5+20250216-2) ... 496s Selecting previously unselected package libnetcdf22:amd64. 496s Preparing to unpack .../094-libnetcdf22_1%3a4.9.3-1_amd64.deb ... 496s Unpacking libnetcdf22:amd64 (1:4.9.3-1) ... 496s Selecting previously unselected package libthai-data. 496s Preparing to unpack .../095-libthai-data_0.1.29-2build1_all.deb ... 496s Unpacking libthai-data (0.1.29-2build1) ... 496s Selecting previously unselected package libthai0:amd64. 496s Preparing to unpack .../096-libthai0_0.1.29-2build1_amd64.deb ... 496s Unpacking libthai0:amd64 (0.1.29-2build1) ... 496s Selecting previously unselected package libpango-1.0-0:amd64. 496s Preparing to unpack .../097-libpango-1.0-0_1.56.2-1_amd64.deb ... 496s Unpacking libpango-1.0-0:amd64 (1.56.2-1) ... 496s Selecting previously unselected package libpangoft2-1.0-0:amd64. 496s Preparing to unpack .../098-libpangoft2-1.0-0_1.56.2-1_amd64.deb ... 496s Unpacking libpangoft2-1.0-0:amd64 (1.56.2-1) ... 496s Selecting previously unselected package libpangocairo-1.0-0:amd64. 496s Preparing to unpack .../099-libpangocairo-1.0-0_1.56.2-1_amd64.deb ... 496s Unpacking libpangocairo-1.0-0:amd64 (1.56.2-1) ... 496s Selecting previously unselected package libpaper2:amd64. 496s Preparing to unpack .../100-libpaper2_2.2.5-0.3_amd64.deb ... 496s Unpacking libpaper2:amd64 (2.2.5-0.3) ... 497s Selecting previously unselected package libpaper-utils. 497s Preparing to unpack .../101-libpaper-utils_2.2.5-0.3_amd64.deb ... 497s Unpacking libpaper-utils (2.2.5-0.3) ... 497s Selecting previously unselected package libpcre2-16-0:amd64. 497s Preparing to unpack .../102-libpcre2-16-0_10.45-1_amd64.deb ... 497s Unpacking libpcre2-16-0:amd64 (10.45-1) ... 497s Selecting previously unselected package libpcre2-32-0:amd64. 497s Preparing to unpack .../103-libpcre2-32-0_10.45-1_amd64.deb ... 497s Unpacking libpcre2-32-0:amd64 (10.45-1) ... 497s Selecting previously unselected package libpcre2-posix3:amd64. 497s Preparing to unpack .../104-libpcre2-posix3_10.45-1_amd64.deb ... 497s Unpacking libpcre2-posix3:amd64 (10.45-1) ... 497s Selecting previously unselected package libpcre2-dev:amd64. 497s Preparing to unpack .../105-libpcre2-dev_10.45-1_amd64.deb ... 497s Unpacking libpcre2-dev:amd64 (10.45-1) ... 497s Selecting previously unselected package libpkgconf3:amd64. 497s Preparing to unpack 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Unpacking libsm6:amd64 (2:1.2.4-1) ... 497s Selecting previously unselected package libtcl8.6:amd64. 497s Preparing to unpack .../112-libtcl8.6_8.6.16+dfsg-1_amd64.deb ... 497s Unpacking libtcl8.6:amd64 (8.6.16+dfsg-1) ... 497s Selecting previously unselected package libjbig0:amd64. 497s Preparing to unpack .../113-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 497s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 497s Selecting previously unselected package libwebp7:amd64. 497s Preparing to unpack .../114-libwebp7_1.5.0-0.1_amd64.deb ... 497s Unpacking libwebp7:amd64 (1.5.0-0.1) ... 497s Selecting previously unselected package libtiff6:amd64. 497s Preparing to unpack .../115-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ... 497s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 497s Selecting previously unselected package libxft2:amd64. 497s Preparing to unpack .../116-libxft2_2.3.6-1build1_amd64.deb ... 497s Unpacking libxft2:amd64 (2.3.6-1build1) ... 497s Selecting previously unselected package libxss1:amd64. 497s Preparing to unpack .../117-libxss1_1%3a1.2.3-1build3_amd64.deb ... 497s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 497s Selecting previously unselected package libtk8.6:amd64. 497s Preparing to unpack .../118-libtk8.6_8.6.16-1_amd64.deb ... 497s Unpacking libtk8.6:amd64 (8.6.16-1) ... 497s Selecting previously unselected package libxt6t64:amd64. 497s Preparing to unpack .../119-libxt6t64_1%3a1.2.1-1.2build1_amd64.deb ... 497s Unpacking libxt6t64:amd64 (1:1.2.1-1.2build1) ... 497s Selecting previously unselected package zip. 497s Preparing to unpack .../120-zip_3.0-14ubuntu2_amd64.deb ... 497s Unpacking zip (3.0-14ubuntu2) ... 497s Selecting previously unselected package unzip. 497s Preparing to unpack .../121-unzip_6.0-28ubuntu6_amd64.deb ... 497s Unpacking unzip (6.0-28ubuntu6) ... 497s Selecting previously unselected package xdg-utils. 497s Preparing to unpack .../122-xdg-utils_1.2.1-2ubuntu1_all.deb ... 497s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 497s Selecting previously unselected package r-base-core. 497s Preparing to unpack .../123-r-base-core_4.4.3-1_amd64.deb ... 497s Unpacking r-base-core (4.4.3-1) ... 498s Selecting previously unselected package r-cran-littler. 498s Preparing to unpack .../124-r-cran-littler_0.3.20-2_amd64.deb ... 498s Unpacking r-cran-littler (0.3.20-2) ... 498s Selecting previously unselected package littler. 498s Preparing to unpack .../125-littler_0.3.20-2_all.deb ... 498s Unpacking littler (0.3.20-2) ... 498s Selecting previously unselected package node-bootstrap-sass. 498s Preparing to unpack .../126-node-bootstrap-sass_3.4.3-2_all.deb ... 498s Unpacking node-bootstrap-sass (3.4.3-2) ... 498s Selecting previously unselected package node-html5shiv. 498s Preparing to unpack .../127-node-html5shiv_3.7.3+dfsg-5_all.deb ... 498s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 498s Selecting previously unselected package node-normalize.css. 498s Preparing to unpack .../128-node-normalize.css_8.0.1-5_all.deb ... 498s Unpacking node-normalize.css (8.0.1-5) ... 498s Selecting previously unselected package pandoc-data. 498s Preparing to unpack .../129-pandoc-data_3.1.11.1-3build1_all.deb ... 498s Unpacking pandoc-data (3.1.11.1-3build1) ... 498s Selecting previously unselected package pandoc. 498s Preparing to unpack .../130-pandoc_3.1.11.1+ds-2_amd64.deb ... 498s Unpacking pandoc (3.1.11.1+ds-2) ... 499s Selecting previously unselected package liblzma-dev:amd64. 499s Preparing to unpack .../131-liblzma-dev_5.6.4-1_amd64.deb ... 499s Unpacking liblzma-dev:amd64 (5.6.4-1) ... 499s Selecting previously unselected package pkgconf-bin. 499s Preparing to unpack .../132-pkgconf-bin_1.8.1-4_amd64.deb ... 499s Unpacking pkgconf-bin (1.8.1-4) ... 499s Selecting previously unselected package pkgconf:amd64. 499s Preparing to unpack .../133-pkgconf_1.8.1-4_amd64.deb ... 499s Unpacking pkgconf:amd64 (1.8.1-4) ... 499s Selecting previously unselected package libtirpc-dev:amd64. 499s Preparing to unpack .../134-libtirpc-dev_1.3.4+ds-1.3_amd64.deb ... 499s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1.3) ... 499s Selecting previously unselected package r-base-dev. 499s Preparing to unpack .../135-r-base-dev_4.4.3-1_all.deb ... 499s Unpacking r-base-dev (4.4.3-1) ... 499s Selecting previously unselected package pkg-r-autopkgtest. 499s Preparing to unpack .../136-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 499s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 499s Selecting previously unselected package r-bioc-biocgenerics. 499s Preparing to unpack .../137-r-bioc-biocgenerics_0.52.0-2_all.deb ... 499s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 499s Selecting previously unselected package r-bioc-s4vectors. 499s Preparing to unpack .../138-r-bioc-s4vectors_0.44.0+dfsg-2_amd64.deb ... 499s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 499s Selecting previously unselected package r-bioc-iranges. 499s Preparing to unpack .../139-r-bioc-iranges_2.40.1-2_amd64.deb ... 499s Unpacking r-bioc-iranges (2.40.1-2) ... 499s Selecting previously unselected package r-bioc-zlibbioc. 499s Preparing to unpack .../140-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 499s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 499s Selecting previously unselected package r-bioc-xvector. 499s Preparing to unpack .../141-r-bioc-xvector_0.46.0-2_amd64.deb ... 499s Unpacking r-bioc-xvector (0.46.0-2) ... 499s Selecting previously unselected package r-cran-curl. 499s Preparing to unpack .../142-r-cran-curl_6.2.1+dfsg-1ubuntu1_amd64.deb ... 499s Unpacking r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 499s Selecting previously unselected package r-cran-jsonlite. 499s Preparing to unpack .../143-r-cran-jsonlite_1.9.1+dfsg-1_amd64.deb ... 499s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 499s Selecting previously unselected package r-cran-mime. 499s Preparing to unpack .../144-r-cran-mime_0.12-2_amd64.deb ... 499s Unpacking r-cran-mime (0.12-2) ... 500s Selecting previously unselected package r-cran-sys. 500s 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previously unselected package r-bioc-genomeinfodbdata. 500s Preparing to unpack .../151-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 500s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 500s Selecting previously unselected package r-bioc-genomeinfodb. 500s Preparing to unpack .../152-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 500s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 500s Selecting previously unselected package r-cran-crayon. 500s Preparing to unpack .../153-r-cran-crayon_1.5.3-1_all.deb ... 500s Unpacking r-cran-crayon (1.5.3-1) ... 500s Selecting previously unselected package r-bioc-biostrings. 500s Preparing to unpack .../154-r-bioc-biostrings_2.74.1+dfsg-2_amd64.deb ... 500s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 500s Selecting previously unselected package r-cran-base64enc. 500s Preparing to unpack .../155-r-cran-base64enc_0.1-3-3_amd64.deb ... 500s Unpacking r-cran-base64enc (0.1-3-3) ... 500s Selecting previously unselected package r-cran-bh. 500s Preparing to unpack .../156-r-cran-bh_1.84.0-1_all.deb ... 500s Unpacking r-cran-bh (1.84.0-1) ... 500s Selecting previously unselected package r-cran-bigmemory.sri. 500s Preparing to unpack .../157-r-cran-bigmemory.sri_0.1.8-1_all.deb ... 500s Unpacking r-cran-bigmemory.sri (0.1.8-1) ... 500s Selecting previously unselected package r-cran-pkgkitten. 500s Preparing to unpack .../158-r-cran-pkgkitten_0.2.4-1_all.deb ... 500s Unpacking r-cran-pkgkitten (0.2.4-1) ... 500s Selecting previously unselected package r-cran-rcpp. 500s Preparing to unpack .../159-r-cran-rcpp_1.0.14-1_amd64.deb ... 500s Unpacking r-cran-rcpp (1.0.14-1) ... 500s Selecting previously unselected package r-cran-uuid. 500s Preparing to unpack .../160-r-cran-uuid_1.2-1-1_amd64.deb ... 500s Unpacking r-cran-uuid (1.2-1-1) ... 500s Selecting previously unselected package r-cran-bigmemory. 500s Preparing to unpack .../161-r-cran-bigmemory_4.6.4-1ubuntu1_amd64.deb ... 500s Unpacking r-cran-bigmemory (4.6.4-1ubuntu1) ... 500s Selecting previously unselected package r-cran-bio3d. 500s Preparing to unpack .../162-r-cran-bio3d_2.4-5-1_amd64.deb ... 500s Unpacking r-cran-bio3d (2.4-5-1) ... 500s Selecting previously unselected package r-cran-bitops. 500s Preparing to unpack .../163-r-cran-bitops_1.0-9-1_amd64.deb ... 500s Unpacking r-cran-bitops (1.0-9-1) ... 500s Selecting previously unselected package r-cran-brio. 500s Preparing to unpack .../164-r-cran-brio_1.1.5-1_amd64.deb ... 500s Unpacking r-cran-brio (1.1.5-1) ... 500s Selecting previously unselected package r-cran-rlang. 500s Preparing to unpack .../165-r-cran-rlang_1.1.5-1_amd64.deb ... 500s Unpacking r-cran-rlang (1.1.5-1) ... 501s Selecting previously unselected package r-cran-fastmap. 501s Preparing to unpack .../166-r-cran-fastmap_1.2.0-1_amd64.deb ... 501s Unpacking r-cran-fastmap (1.2.0-1) ... 501s Selecting previously unselected package r-cran-cachem. 501s Preparing to unpack .../167-r-cran-cachem_1.1.0-1_amd64.deb ... 501s Unpacking r-cran-cachem (1.1.0-1) ... 501s Selecting previously unselected package r-cran-digest. 501s Preparing to unpack .../168-r-cran-digest_0.6.37-1_amd64.deb ... 501s Unpacking r-cran-digest (0.6.37-1) ... 501s Selecting previously unselected package r-cran-htmltools. 501s Preparing to unpack .../169-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 501s Unpacking r-cran-htmltools (0.5.8.1-1) ... 501s Selecting previously unselected package r-cran-jquerylib. 501s Preparing to unpack .../170-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 501s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 501s Selecting previously unselected package r-cran-cli. 501s Preparing to unpack .../171-r-cran-cli_3.6.4-1_amd64.deb ... 501s Unpacking r-cran-cli (3.6.4-1) ... 501s Selecting previously unselected package r-cran-glue. 501s Preparing to unpack .../172-r-cran-glue_1.8.0-1_amd64.deb ... 501s Unpacking r-cran-glue (1.8.0-1) ... 501s Selecting previously unselected package r-cran-lifecycle. 501s Preparing to unpack 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unselected package r-cran-ps. 501s Preparing to unpack .../179-r-cran-ps_1.9.0-1_amd64.deb ... 501s Unpacking r-cran-ps (1.9.0-1) ... 501s Selecting previously unselected package r-cran-processx. 501s Preparing to unpack .../180-r-cran-processx_3.8.6-1_amd64.deb ... 501s Unpacking r-cran-processx (3.8.6-1) ... 501s Selecting previously unselected package r-cran-callr. 501s Preparing to unpack .../181-r-cran-callr_3.7.6-1_all.deb ... 501s Unpacking r-cran-callr (3.7.6-1) ... 501s Selecting previously unselected package r-cran-commonmark. 501s Preparing to unpack .../182-r-cran-commonmark_1.9.2-2_amd64.deb ... 501s Unpacking r-cran-commonmark (1.9.2-2) ... 501s Selecting previously unselected package r-cran-cpp11. 501s Preparing to unpack .../183-r-cran-cpp11_0.5.2-1_all.deb ... 501s Unpacking r-cran-cpp11 (0.5.2-1) ... 501s Selecting previously unselected package r-cran-desc. 501s Preparing to unpack .../184-r-cran-desc_1.4.3-1_all.deb ... 501s Unpacking r-cran-desc (1.4.3-1) ... 501s Selecting previously unselected package r-cran-diffobj. 501s Preparing to unpack .../185-r-cran-diffobj_0.3.5-1_amd64.deb ... 501s Unpacking r-cran-diffobj (0.3.5-1) ... 501s Selecting previously unselected package r-cran-evaluate. 501s Preparing to unpack .../186-r-cran-evaluate_1.0.3-1_all.deb ... 501s Unpacking r-cran-evaluate (1.0.3-1) ... 502s Selecting previously unselected package r-cran-fontawesome. 502s Preparing to unpack .../187-r-cran-fontawesome_0.5.3-1_all.deb ... 502s Unpacking r-cran-fontawesome (0.5.3-1) ... 502s Selecting previously unselected package r-cran-xfun. 502s Preparing to unpack .../188-r-cran-xfun_0.51+dfsg-1_amd64.deb ... 502s Unpacking r-cran-xfun (0.51+dfsg-1) ... 502s Selecting previously unselected package r-cran-highr. 502s Preparing to unpack .../189-r-cran-highr_0.11+dfsg-1_all.deb ... 502s Unpacking r-cran-highr (0.11+dfsg-1) ... 502s Selecting previously unselected package r-cran-later. 502s Preparing to unpack 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Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 507s Setting up r-cran-httr (1.4.7+dfsg-1) ... 507s Setting up r-cran-memoise (2.0.1-1) ... 507s Setting up r-cran-promises (1.3.2+dfsg-1) ... 507s Setting up r-bioc-xvector (0.46.0-2) ... 507s Setting up r-cran-pkgbuild (1.4.6-1) ... 507s Setting up r-cran-pkgload (1.4.0-1) ... 507s Setting up r-base-dev (4.4.3-1) ... 507s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 507s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 507s Setting up r-cran-testthat (3.2.3-1) ... 507s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 507s Setting up r-cran-bslib (0.8.0+dfsg-1) ... 507s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 507s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 507s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 507s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 507s Processing triggers for libc-bin (2.41-1ubuntu2) ... 507s Processing triggers for man-db (2.13.0-1) ... 509s Processing triggers for install-info (7.1.1-1) ... 512s autopkgtest [22:11:57]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 512s autopkgtest [22:11:57]: test pkg-r-autopkgtest: [----------------------- 512s Test: Try to load the R library bio3d 512s 512s R version 4.4.3 (2025-02-28) -- "Trophy Case" 512s Copyright (C) 2025 The R Foundation for Statistical Computing 512s Platform: x86_64-pc-linux-gnu 512s 512s R is free software and comes with ABSOLUTELY NO WARRANTY. 512s You are welcome to redistribute it under certain conditions. 512s Type 'license()' or 'licence()' for distribution details. 512s 512s R is a collaborative project with many contributors. 512s Type 'contributors()' for more information and 512s 'citation()' on how to cite R or R packages in publications. 512s 512s Type 'demo()' for some demos, 'help()' for on-line help, or 512s 'help.start()' for an HTML browser interface to help. 512s Type 'q()' to quit R. 512s 512s > library('bio3d') 512s > 512s > 512s Other tests are currently unsupported! 512s They will be progressively added. 512s autopkgtest [22:11:57]: test pkg-r-autopkgtest: -----------------------] 513s autopkgtest [22:11:58]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 513s pkg-r-autopkgtest PASS 513s autopkgtest [22:11:58]: @@@@@@@@@@@@@@@@@@@@ summary 513s run-unit-test PASS 513s pkg-r-autopkgtest PASS 530s nova [W] Skipping flock for amd64 530s Creating nova instance adt-plucky-amd64-r-cran-bio3d-20250315-220324-juju-7f2275-prod-proposed-migration-environment-15-cff45603-3154-4433-be29-802464bf2ae4 from image adt/ubuntu-plucky-amd64-server-20250306.img (UUID 60d877d7-b74c-4f24-920d-f4570db0a338)... 530s nova [W] Timed out waiting for b0ec6691-2d26-4f53-9a59-b6a734c07f53 to get deleted. 530s nova [W] Skipping flock for amd64 530s Creating nova instance adt-plucky-amd64-r-cran-bio3d-20250315-220324-juju-7f2275-prod-proposed-migration-environment-15-cff45603-3154-4433-be29-802464bf2ae4 from image adt/ubuntu-plucky-amd64-server-20250306.img (UUID 60d877d7-b74c-4f24-920d-f4570db0a338)... 530s nova [W] Timed out waiting for 8c2baf48-79cf-4e97-a835-2fe4e6c86cbf to get deleted.