0s autopkgtest [22:01:58]: starting date and time: 2025-03-15 22:01:58+0000 0s autopkgtest [22:01:58]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [22:01:58]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.yn48briu/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-cran-adephylo --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-13.secgroup --name adt-plucky-amd64-r-cran-adephylo-20250315-220158-juju-7f2275-prod-proposed-migration-environment-20-66288ec7-070a-4826-9d49-84adae4a1b25 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 46s autopkgtest [22:02:44]: testbed dpkg architecture: amd64 46s autopkgtest [22:02:44]: testbed apt version: 2.9.31ubuntu1 46s autopkgtest [22:02:44]: @@@@@@@@@@@@@@@@@@@@ test bed setup 47s autopkgtest [22:02:45]: testbed release detected to be: None 47s autopkgtest [22:02:45]: updating testbed package index (apt update) 48s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 48s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 48s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 48s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 48s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [369 kB] 48s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [44.1 kB] 48s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [14.5 kB] 48s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [85.7 kB] 48s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [67.4 kB] 48s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 c-n-f Metadata [1852 B] 48s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 c-n-f Metadata [116 B] 48s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [342 kB] 48s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [174 kB] 48s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 c-n-f Metadata [15.3 kB] 48s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [16.1 kB] 48s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [8544 B] 48s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 c-n-f Metadata [628 B] 49s Fetched 1265 kB in 1s (1502 kB/s) 49s Reading package lists... 50s Reading package lists... 50s Building dependency tree... 50s Reading state information... 51s Calculating upgrade... 51s Calculating upgrade... 51s The following package was automatically installed and is no longer required: 51s libnl-genl-3-200 51s Use 'sudo apt autoremove' to remove it. 51s The following NEW packages will be installed: 51s bpftool libdebuginfod-common libdebuginfod1t64 linux-headers-6.14.0-10 51s linux-headers-6.14.0-10-generic linux-image-6.14.0-10-generic 51s linux-modules-6.14.0-10-generic linux-modules-extra-6.14.0-10-generic 51s linux-perf linux-tools-6.14.0-10 linux-tools-6.14.0-10-generic pnp.ids 51s The following packages will be upgraded: 51s apparmor apt apt-utils binutils binutils-common binutils-x86-64-linux-gnu 51s cloud-init cloud-init-base curl dosfstools exfatprogs fwupd gcc-15-base 51s gir1.2-girepository-2.0 gir1.2-glib-2.0 htop hwdata initramfs-tools 51s initramfs-tools-bin initramfs-tools-core libapparmor1 libapt-pkg7.0 51s libassuan9 libatomic1 libaudit-common libaudit1 libbinutils libbrotli1 51s libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libctf-nobfd0 libctf0 51s libcurl3t64-gnutls libcurl4t64 libestr0 libftdi1-2 libfwupd3 libgcc-s1 51s libgirepository-1.0-1 libglib2.0-0t64 libglib2.0-data libgpgme11t64 51s libgprofng0 libjemalloc2 liblz4-1 liblzma5 libmm-glib0 libncurses6 51s libncursesw6 libnewt0.52 libnl-3-200 libnl-genl-3-200 libnl-route-3-200 51s libnss-systemd libpam-systemd libparted2t64 libpci3 libpython3-stdlib 51s libpython3.13 libpython3.13-minimal libpython3.13-stdlib libseccomp2 51s libselinux1 libsemanage-common libsemanage2 libsframe1 libsqlite3-0 51s libstdc++6 libsystemd-shared libsystemd0 libtinfo6 libudev1 libxml2 51s linux-firmware linux-generic linux-headers-generic linux-headers-virtual 51s linux-image-generic linux-image-virtual linux-libc-dev linux-tools-common 51s linux-virtual locales media-types ncurses-base ncurses-bin ncurses-term 51s parted pci.ids pciutils pinentry-curses python-apt-common python3 51s python3-apt python3-bcrypt python3-cffi-backend python3-dbus python3-gi 51s python3-jinja2 python3-lazr.uri python3-markupsafe python3-minimal 51s python3-newt python3-rpds-py python3-systemd python3-yaml python3.13 51s python3.13-gdbm python3.13-minimal rsync rsyslog strace systemd 51s systemd-cryptsetup systemd-resolved systemd-sysv systemd-timesyncd 51s ubuntu-kernel-accessories ubuntu-minimal ubuntu-standard udev whiptail 51s xz-utils 51s 126 upgraded, 12 newly installed, 0 to remove and 0 not upgraded. 51s Need to get 829 MB of archives. 51s After this operation, 325 MB of additional disk space will be used. 51s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-bin amd64 6.5+20250216-2 [194 kB] 52s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-dev-bin amd64 2.41-1ubuntu1 [24.7 kB] 52s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6-dev amd64 2.41-1ubuntu1 [2182 kB] 52s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 locales all 2.41-1ubuntu1 [4246 kB] 52s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6 amd64 2.41-1ubuntu1 [3327 kB] 52s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-bin amd64 2.41-1ubuntu1 [701 kB] 52s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-libc-dev amd64 6.14.0-10.10 [1723 kB] 52s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libatomic1 amd64 15-20250222-0ubuntu1 [10.4 kB] 52s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-15-base amd64 15-20250222-0ubuntu1 [53.4 kB] 52s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-s1 amd64 15-20250222-0ubuntu1 [77.8 kB] 52s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++6 amd64 15-20250222-0ubuntu1 [798 kB] 52s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-base all 6.5+20250216-2 [25.9 kB] 52s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-term all 6.5+20250216-2 [276 kB] 52s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 liblz4-1 amd64 1.10.0-4 [66.4 kB] 52s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma5 amd64 5.6.4-1 [157 kB] 52s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd0 amd64 257.3-1ubuntu3 [595 kB] 52s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libnss-systemd amd64 257.3-1ubuntu3 [199 kB] 52s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-sysv amd64 257.3-1ubuntu3 [11.9 kB] 52s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-resolved amd64 257.3-1ubuntu3 [345 kB] 52s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-systemd amd64 257.3-1ubuntu3 [302 kB] 52s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd-shared amd64 257.3-1ubuntu3 [2371 kB] 52s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd amd64 257.3-1ubuntu3 [3052 kB] 52s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-timesyncd amd64 257.3-1ubuntu3 [42.1 kB] 52s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-cryptsetup amd64 257.3-1ubuntu3 [124 kB] 52s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 udev amd64 257.3-1ubuntu3 [1404 kB] 52s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libudev1 amd64 257.3-1ubuntu3 [215 kB] 52s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit-common all 1:4.0.2-2ubuntu2 [6628 B] 52s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libcap-ng0 amd64 0.8.5-4build1 [15.6 kB] 52s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit1 amd64 1:4.0.2-2ubuntu2 [54.0 kB] 52s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libseccomp2 amd64 2.5.5-1ubuntu6 [53.5 kB] 52s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libselinux1 amd64 3.7-3ubuntu3 [87.3 kB] 52s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libapparmor1 amd64 4.1.0~beta5-0ubuntu8 [55.0 kB] 53s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libapt-pkg7.0 amd64 2.9.33 [1138 kB] 53s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 apt amd64 2.9.33 [1439 kB] 53s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 apt-utils amd64 2.9.33 [222 kB] 53s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-minimal amd64 3.13.2-2 [27.7 kB] 53s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 python3 amd64 3.13.2-2 [24.0 kB] 53s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13 amd64 3.13.2-2 [2341 kB] 53s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 media-types all 13.0.0 [29.9 kB] 53s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses6 amd64 6.5+20250216-2 [126 kB] 53s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libncursesw6 amd64 6.5+20250216-2 [165 kB] 53s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libtinfo6 amd64 6.5+20250216-2 [119 kB] 53s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libsqlite3-0 amd64 3.46.1-2 [715 kB] 53s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.2-2 [735 kB] 53s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.2-2 [2365 kB] 53s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.2-2 [883 kB] 53s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.2-2 [2066 kB] 53s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.4 kB] 53s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 rsync amd64 3.4.1+ds1-3 [482 kB] 53s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod-common all 0.192-4 [15.4 kB] 53s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage-common all 3.7-2.1build1 [7268 B] 53s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage2 amd64 3.7-2.1build1 [106 kB] 53s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libassuan9 amd64 3.0.2-2 [43.1 kB] 53s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-girepository-2.0 amd64 1.83.4-1 [25.3 kB] 53s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-glib-2.0 amd64 2.84.0-1 [184 kB] 53s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-0t64 amd64 2.84.0-1 [1669 kB] 53s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libgirepository-1.0-1 amd64 1.83.4-1 [89.5 kB] 53s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libestr0 amd64 0.1.11-2 [8340 B] 53s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-data all 2.84.0-1 [53.0 kB] 53s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-newt amd64 0.52.24-4ubuntu2 [21.1 kB] 53s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libnewt0.52 amd64 0.52.24-4ubuntu2 [55.7 kB] 53s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2ubuntu5 [772 kB] 53s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 python-apt-common all 2.9.9build1 [21.3 kB] 53s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-apt amd64 2.9.9build1 [172 kB] 53s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-cffi-backend amd64 1.17.1-2build2 [96.6 kB] 53s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dbus amd64 1.3.2-5build5 [102 kB] 53s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-4build1 [252 kB] 53s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-yaml amd64 6.0.2-1build2 [144 kB] 53s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 rsyslog amd64 8.2412.0-2ubuntu2 [555 kB] 53s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 whiptail amd64 0.52.24-4ubuntu2 [19.1 kB] 53s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-minimal amd64 1.549 [11.5 kB] 53s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 apparmor amd64 4.1.0~beta5-0ubuntu8 [701 kB] 53s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 dosfstools amd64 4.2-1.2 [95.0 kB] 53s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-genl-3-200 amd64 3.7.0-1 [12.2 kB] 53s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-route-3-200 amd64 3.7.0-1 [191 kB] 53s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-3-200 amd64 3.7.0-1 [64.9 kB] 53s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 parted amd64 3.6-5 [53.9 kB] 53s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libparted2t64 amd64 3.6-5 [158 kB] 53s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 pci.ids all 0.0~2025.03.09-1 [285 kB] 53s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 pciutils amd64 1:3.13.0-2 [110 kB] 53s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 libpci3 amd64 1:3.13.0-2 [39.8 kB] 53s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 strace amd64 6.13+ds-1ubuntu1 [622 kB] 53s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 xz-utils amd64 5.6.4-1 [278 kB] 53s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-standard amd64 1.549 [11.5 kB] 53s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libgprofng0 amd64 2.44-3ubuntu1 [886 kB] 53s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf0 amd64 2.44-3ubuntu1 [96.5 kB] 53s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf-nobfd0 amd64 2.44-3ubuntu1 [98.9 kB] 53s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-x86-64-linux-gnu amd64 2.44-3ubuntu1 [1108 kB] 53s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libbinutils amd64 2.44-3ubuntu1 [585 kB] 53s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils amd64 2.44-3ubuntu1 [208 kB] 53s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-common amd64 2.44-3ubuntu1 [215 kB] 53s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libsframe1 amd64 2.44-3ubuntu1 [14.8 kB] 53s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 hwdata all 0.393-3 [1562 B] 53s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 pnp.ids all 0.393-3 [29.5 kB] 53s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-common all 6.14.0-10.10 [295 kB] 54s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 bpftool amd64 7.6.0+6.14.0-10.10 [1147 kB] 54s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-markupsafe amd64 2.1.5-1build4 [13.4 kB] 54s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 54s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init-base all 25.1-0ubuntu3 [616 kB] 54s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libbrotli1 amd64 1.1.0-2build4 [365 kB] 54s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 curl amd64 8.12.1-3ubuntu1 [258 kB] 54s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4t64 amd64 8.12.1-3ubuntu1 [437 kB] 54s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 exfatprogs amd64 1.2.8-1 [76.3 kB] 54s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl3t64-gnutls amd64 8.12.1-3ubuntu1 [432 kB] 54s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 fwupd amd64 2.0.6-4 [5408 kB] 54s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libfwupd3 amd64 2.0.6-4 [136 kB] 54s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libmm-glib0 amd64 1.23.4-0ubuntu3 [251 kB] 54s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 htop amd64 3.4.0-2 [195 kB] 54s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-firmware amd64 20250310.git9e1370d3-0ubuntu1 [571 MB] 75s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools all 0.146ubuntu1 [7920 B] 75s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-core all 0.146ubuntu1 [51.9 kB] 75s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-bin amd64 0.146ubuntu1 [26.2 kB] 75s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod1t64 amd64 0.192-4 [21.0 kB] 75s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 libftdi1-2 amd64 1.5-8build1 [30.2 kB] 75s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libgpgme11t64 amd64 1.24.2-1ubuntu2 [155 kB] 75s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libjemalloc2 amd64 5.3.0-3 [277 kB] 75s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-6.14.0-10-generic amd64 6.14.0-10.10 [41.2 MB] 77s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-6.14.0-10-generic amd64 6.14.0-10.10 [15.3 MB] 78s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-extra-6.14.0-10-generic amd64 6.14.0-10.10 [120 MB] 82s Get:120 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-generic amd64 6.14.0-10.10 [1730 B] 82s Get:121 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-generic amd64 6.14.0-10.10 [11.1 kB] 82s Get:122 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-virtual amd64 6.14.0-10.10 [1722 B] 82s Get:123 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-virtual amd64 6.14.0-10.10 [11.1 kB] 82s Get:124 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-virtual amd64 6.14.0-10.10 [1642 B] 82s Get:125 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10 all 6.14.0-10.10 [14.2 MB] 83s Get:126 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10-generic amd64 6.14.0-10.10 [3915 kB] 83s Get:127 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-generic amd64 6.14.0-10.10 [11.0 kB] 83s Get:128 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-perf amd64 6.14.0-10.10 [4122 kB] 83s Get:129 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10 amd64 6.14.0-10.10 [1394 kB] 83s Get:130 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10-generic amd64 6.14.0-10.10 [830 B] 83s Get:131 http://ftpmaster.internal/ubuntu plucky/main amd64 pinentry-curses amd64 1.3.1-2ubuntu3 [42.3 kB] 83s Get:132 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lazr.uri all 1.0.6-6 [13.7 kB] 83s Get:133 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-rpds-py amd64 0.21.0-2ubuntu2 [278 kB] 83s Get:134 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-systemd amd64 235-1build6 [43.9 kB] 83s Get:135 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-gdbm amd64 3.13.2-2 [31.9 kB] 83s Get:136 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-kernel-accessories amd64 1.549 [11.2 kB] 83s Get:137 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init all 25.1-0ubuntu3 [2100 B] 83s Get:138 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-bcrypt amd64 4.2.0-2.1build1 [221 kB] 84s Preconfiguring packages ... 84s Fetched 829 MB in 32s (25.8 MB/s) 84s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 88s Preparing to unpack .../libaudit1_1%3a4.0.2-2ubuntu2_amd64.deb ... 88s Unpacking libaudit1:amd64 (1:4.0.2-2ubuntu2) over (1:4.0.2-2ubuntu1) ... 88s Setting up libaudit1:amd64 (1:4.0.2-2ubuntu2) ... 88s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 90s Preparing to unpack .../apt-utils_2.9.33_amd64.deb ... 90s Unpacking apt-utils (2.9.33) over (2.9.31ubuntu1) ... 90s Preparing to unpack .../python3-minimal_3.13.2-2_amd64.deb ... 90s Unpacking python3-minimal (3.13.2-2) over (3.13.2-1) ... 90s Setting up python3-minimal (3.13.2-2) ... 90s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 90s Preparing to unpack .../0-libsqlite3-0_3.46.1-2_amd64.deb ... 90s Unpacking libsqlite3-0:amd64 (3.46.1-2) over (3.46.1-1) ... 90s Preparing to unpack .../1-python3.13_3.13.2-2_amd64.deb ... 90s Unpacking python3.13 (3.13.2-2) over (3.13.2-1) ... 90s Preparing to unpack .../2-python3.13-minimal_3.13.2-2_amd64.deb ... 90s Unpacking python3.13-minimal (3.13.2-2) over (3.13.2-1) ... 90s Preparing to unpack .../3-libpython3.13-minimal_3.13.2-2_amd64.deb ... 91s Unpacking libpython3.13-minimal:amd64 (3.13.2-2) over (3.13.2-1) ... 91s Preparing to unpack .../4-libpython3.13-stdlib_3.13.2-2_amd64.deb ... 91s Unpacking libpython3.13-stdlib:amd64 (3.13.2-2) over (3.13.2-1) ... 91s Preparing to unpack .../5-libpython3-stdlib_3.13.2-2_amd64.deb ... 91s Unpacking libpython3-stdlib:amd64 (3.13.2-2) over (3.13.2-1) ... 91s Preparing to unpack .../6-rsync_3.4.1+ds1-3_amd64.deb ... 91s Unpacking rsync (3.4.1+ds1-3) over (3.4.1-0syncable1) ... 91s Selecting previously unselected package libdebuginfod-common. 91s Preparing to unpack .../7-libdebuginfod-common_0.192-4_all.deb ... 91s Unpacking libdebuginfod-common (0.192-4) ... 91s Preparing to unpack .../8-libsemanage-common_3.7-2.1build1_all.deb ... 91s Unpacking libsemanage-common (3.7-2.1build1) over (3.7-2.1) ... 91s Setting up libsemanage-common (3.7-2.1build1) ... 91s (Reading database ... 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unpack .../29-xz-utils_5.6.4-1_amd64.deb ... 94s Unpacking xz-utils (5.6.4-1) over (5.6.3-1) ... 94s Preparing to unpack .../30-ubuntu-standard_1.549_amd64.deb ... 94s Unpacking ubuntu-standard (1.549) over (1.548) ... 94s Preparing to unpack .../31-libgprofng0_2.44-3ubuntu1_amd64.deb ... 94s Unpacking libgprofng0:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 94s Preparing to unpack .../32-libctf0_2.44-3ubuntu1_amd64.deb ... 94s Unpacking libctf0:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 94s Preparing to unpack .../33-libctf-nobfd0_2.44-3ubuntu1_amd64.deb ... 94s Unpacking libctf-nobfd0:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 94s Preparing to unpack .../34-binutils-x86-64-linux-gnu_2.44-3ubuntu1_amd64.deb ... 94s Unpacking binutils-x86-64-linux-gnu (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 94s Preparing to unpack .../35-libbinutils_2.44-3ubuntu1_amd64.deb ... 94s Unpacking libbinutils:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 94s Preparing to unpack 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(0.21.0-2ubuntu1) ... 105s Preparing to unpack .../80-python3-systemd_235-1build6_amd64.deb ... 105s Unpacking python3-systemd (235-1build6) over (235-1build5) ... 105s Preparing to unpack .../81-python3.13-gdbm_3.13.2-2_amd64.deb ... 105s Unpacking python3.13-gdbm (3.13.2-2) over (3.13.2-1) ... 105s Preparing to unpack .../82-ubuntu-kernel-accessories_1.549_amd64.deb ... 105s Unpacking ubuntu-kernel-accessories (1.549) over (1.548) ... 105s Preparing to unpack .../83-cloud-init_25.1-0ubuntu3_all.deb ... 105s Unpacking cloud-init (25.1-0ubuntu3) over (25.1-0ubuntu2) ... 105s Preparing to unpack .../84-python3-bcrypt_4.2.0-2.1build1_amd64.deb ... 106s Unpacking python3-bcrypt (4.2.0-2.1build1) over (4.2.0-2.1) ... 106s Setting up linux-headers-6.14.0-10 (6.14.0-10.10) ... 106s Setting up media-types (13.0.0) ... 106s Installing new version of config file /etc/mime.types ... 106s Setting up linux-headers-6.14.0-10-generic (6.14.0-10.10) ... 106s Setting up ubuntu-kernel-accessories (1.549) ... 106s Setting up libapparmor1:amd64 (4.1.0~beta5-0ubuntu8) ... 106s Setting up pci.ids (0.0~2025.03.09-1) ... 106s Setting up libnewt0.52:amd64 (0.52.24-4ubuntu2) ... 106s Setting up apt-utils (2.9.33) ... 106s Setting up libdebuginfod-common (0.192-4) ... 106s Setting up exfatprogs (1.2.8-1) ... 106s Setting up linux-firmware (20250310.git9e1370d3-0ubuntu1) ... 106s Setting up bpftool (7.6.0+6.14.0-10.10) ... 106s Setting up libestr0:amd64 (0.1.11-2) ... 106s Setting up libbrotli1:amd64 (1.1.0-2build4) ... 106s Setting up libsqlite3-0:amd64 (3.46.1-2) ... 106s Setting up dosfstools (4.2-1.2) ... 106s Setting up rsyslog (8.2412.0-2ubuntu2) ... 106s info: The user `syslog' is already a member of `adm'. 107s Setting up binutils-common:amd64 (2.44-3ubuntu1) ... 107s Setting up libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) ... 107s Setting up linux-libc-dev:amd64 (6.14.0-10.10) ... 107s Setting up libctf-nobfd0:amd64 (2.44-3ubuntu1) ... 107s Setting up systemd (257.3-1ubuntu3) ... 107s /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring. 107s Created symlink '/run/systemd/system/tmp.mount' → '/dev/null'. 107s /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring. 108s Setting up libparted2t64:amd64 (3.6-5) ... 108s Removing 'diversion of /lib/x86_64-linux-gnu/libparted.so.2 to /lib/x86_64-linux-gnu/libparted.so.2.usr-is-merged by libparted2t64' 108s Removing 'diversion of /lib/x86_64-linux-gnu/libparted.so.2.0.5 to /lib/x86_64-linux-gnu/libparted.so.2.0.5.usr-is-merged by libparted2t64' 108s Setting up linux-headers-generic (6.14.0-10.10) ... 108s Setting up libjemalloc2:amd64 (5.3.0-3) ... 108s Setting up locales (2.41-1ubuntu1) ... 108s Installing new version of config file /etc/locale.alias ... 108s Generating locales (this might take a while)... 110s en_US.UTF-8... done 110s Generation complete. 110s Setting up libsframe1:amd64 (2.44-3ubuntu1) ... 110s Setting up libpython3.13-minimal:amd64 (3.13.2-2) ... 110s Setting up apparmor (4.1.0~beta5-0ubuntu8) ... 110s Installing new version of config file /etc/apparmor.d/fusermount3 ... 110s Installing new version of config file /etc/apparmor.d/lsusb ... 110s Installing new version of config file /etc/apparmor.d/openvpn ... 111s Reloading AppArmor profiles 112s Setting up libftdi1-2:amd64 (1.5-8build1) ... 112s Setting up libglib2.0-data (2.84.0-1) ... 112s Setting up systemd-cryptsetup (257.3-1ubuntu3) ... 112s Setting up libncurses6:amd64 (6.5+20250216-2) ... 112s Setting up strace (6.13+ds-1ubuntu1) ... 112s Setting up xz-utils (5.6.4-1) ... 112s Setting up systemd-timesyncd (257.3-1ubuntu3) ... 113s systemd-time-wait-sync.service is a disabled or a static unit not running, not starting it. 113s Setting up libatomic1:amd64 (15-20250222-0ubuntu1) ... 113s Setting up udev (257.3-1ubuntu3) ... 115s Setting up linux-modules-6.14.0-10-generic (6.14.0-10.10) ... 116s Setting up libncursesw6:amd64 (6.5+20250216-2) ... 116s Setting up libpci3:amd64 (1:3.13.0-2) ... 116s Setting up whiptail (0.52.24-4ubuntu2) ... 116s Setting up python-apt-common (2.9.9build1) ... 116s Setting up pnp.ids (0.393-3) ... 116s Setting up libnl-3-200:amd64 (3.7.0-1) ... 116s Setting up python3.13-minimal (3.13.2-2) ... 117s Setting up libgpgme11t64:amd64 (1.24.2-1ubuntu2) ... 117s Setting up libbinutils:amd64 (2.44-3ubuntu1) ... 117s Setting up libc-dev-bin (2.41-1ubuntu1) ... 117s Setting up libpython3.13-stdlib:amd64 (3.13.2-2) ... 117s Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2ubuntu5) ... 117s Setting up rsync (3.4.1+ds1-3) ... 117s rsync.service is a disabled or a static unit not running, not starting it. 117s Setting up python3.13-gdbm (3.13.2-2) ... 117s Setting up libpython3-stdlib:amd64 (3.13.2-2) ... 117s Setting up systemd-resolved (257.3-1ubuntu3) ... 118s Setting up initramfs-tools-bin (0.146ubuntu1) ... 118s Setting up ncurses-term (6.5+20250216-2) ... 118s Setting up libctf0:amd64 (2.44-3ubuntu1) ... 118s Setting up libpython3.13:amd64 (3.13.2-2) ... 118s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 118s Setting up libdebuginfod1t64:amd64 (0.192-4) ... 118s Setting up systemd-sysv (257.3-1ubuntu3) ... 118s Setting up linux-headers-virtual (6.14.0-10.10) ... 118s Setting up libcurl4t64:amd64 (8.12.1-3ubuntu1) ... 118s Setting up python3.13 (3.13.2-2) ... 119s Setting up htop (3.4.0-2) ... 119s Setting up linux-image-6.14.0-10-generic (6.14.0-10.10) ... 121s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.12.0-16-generic 121s I: /boot/initrd.img.old is now a symlink to initrd.img-6.12.0-16-generic 121s I: /boot/vmlinuz is now a symlink to vmlinuz-6.14.0-10-generic 121s I: /boot/initrd.img is now a symlink to initrd.img-6.14.0-10-generic 121s Setting up parted (3.6-5) ... 121s Setting up libnss-systemd:amd64 (257.3-1ubuntu3) ... 121s Setting up python3 (3.13.2-2) ... 122s Setting up python3-newt:amd64 (0.52.24-4ubuntu2) ... 122s Setting up python3-markupsafe (2.1.5-1build4) ... 122s Setting up linux-modules-extra-6.14.0-10-generic (6.14.0-10.10) ... 124s Setting up libnl-route-3-200:amd64 (3.7.0-1) ... 124s Setting up hwdata (0.393-3) ... 124s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 124s Setting up libglib2.0-0t64:amd64 (2.84.0-1) ... 124s No schema files found: doing nothing. 124s Setting up libgprofng0:amd64 (2.44-3ubuntu1) ... 124s Setting up linux-perf (6.14.0-10.10) ... 124s Setting up gir1.2-glib-2.0:amd64 (2.84.0-1) ... 124s Setting up pciutils (1:3.13.0-2) ... 124s Setting up python3-rpds-py (0.21.0-2ubuntu2) ... 124s Setting up libmm-glib0:amd64 (1.23.4-0ubuntu3) ... 124s Setting up libnl-genl-3-200:amd64 (3.7.0-1) ... 124s Setting up libpam-systemd:amd64 (257.3-1ubuntu3) ... 125s Setting up libc6-dev:amd64 (2.41-1ubuntu1) ... 125s Setting up libgirepository-1.0-1:amd64 (1.83.4-1) ... 125s Setting up curl (8.12.1-3ubuntu1) ... 125s Setting up linux-image-virtual (6.14.0-10.10) ... 125s Setting up initramfs-tools-core (0.146ubuntu1) ... 125s Setting up linux-tools-common (6.14.0-10.10) ... 125s Setting up python3-systemd (235-1build6) ... 125s Setting up python3-cffi-backend:amd64 (1.17.1-2build2) ... 125s Setting up binutils-x86-64-linux-gnu (2.44-3ubuntu1) ... 125s Setting up linux-image-generic (6.14.0-10.10) ... 125s Setting up python3-dbus (1.3.2-5build5) ... 125s Setting up linux-tools-6.14.0-10 (6.14.0-10.10) ... 125s Setting up initramfs-tools (0.146ubuntu1) ... 125s Installing new version of config file /etc/kernel/postinst.d/initramfs-tools ... 125s Installing new version of config file /etc/kernel/postrm.d/initramfs-tools ... 125s update-initramfs: deferring update (trigger activated) 125s Setting up linux-generic (6.14.0-10.10) ... 125s Setting up ubuntu-minimal (1.549) ... 125s Setting up python3-apt (2.9.9build1) ... 125s Setting up python3-bcrypt (4.2.0-2.1build1) ... 125s Setting up python3-yaml (6.0.2-1build2) ... 125s Setting up libfwupd3:amd64 (2.0.6-4) ... 125s Setting up python3-lazr.uri (1.0.6-6) ... 125s Setting up binutils (2.44-3ubuntu1) ... 125s Setting up ubuntu-standard (1.549) ... 125s Setting up cloud-init-base (25.1-0ubuntu3) ... 127s Setting up linux-virtual (6.14.0-10.10) ... 127s Setting up gir1.2-girepository-2.0:amd64 (1.83.4-1) ... 127s Setting up python3-gi (3.50.0-4build1) ... 127s Setting up linux-tools-6.14.0-10-generic (6.14.0-10.10) ... 127s Setting up fwupd (2.0.6-4) ... 128s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 128s fwupd.service is a disabled or a static unit not running, not starting it. 128s Setting up cloud-init (25.1-0ubuntu3) ... 128s Processing triggers for man-db (2.13.0-1) ... 129s Processing triggers for dbus (1.16.2-1ubuntu1) ... 129s Processing triggers for shared-mime-info (2.4-5) ... 129s Warning: program compiled against libxml 212 using older 209 130s Processing triggers for libc-bin (2.41-1ubuntu1) ... 130s Processing triggers for linux-image-6.14.0-10-generic (6.14.0-10.10) ... 130s /etc/kernel/postinst.d/initramfs-tools: 130s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 130s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 140s /etc/kernel/postinst.d/zz-update-grub: 140s Sourcing file `/etc/default/grub' 140s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 140s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 140s Generating grub configuration file ... 141s Found linux image: /boot/vmlinuz-6.14.0-10-generic 141s Found initrd image: /boot/initrd.img-6.14.0-10-generic 141s Found linux image: /boot/vmlinuz-6.12.0-16-generic 141s Found initrd image: /boot/initrd.img-6.12.0-16-generic 141s Found linux image: /boot/vmlinuz-6.11.0-8-generic 141s Found initrd image: /boot/initrd.img-6.11.0-8-generic 141s Warning: os-prober will not be executed to detect other bootable partitions. 141s Systems on them will not be added to the GRUB boot configuration. 141s Check GRUB_DISABLE_OS_PROBER documentation entry. 141s Adding boot menu entry for UEFI Firmware Settings ... 141s done 141s Processing triggers for initramfs-tools (0.146ubuntu1) ... 141s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 141s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 153s Reading package lists... 153s Building dependency tree... 153s Reading state information... 153s Solving dependencies... 154s The following packages will be REMOVED: 154s libnl-genl-3-200* libnsl2* libpython3.12-minimal* libpython3.12-stdlib* 154s libpython3.12t64* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 154s linux-headers-6.12.0-16* linux-headers-6.12.0-16-generic* 154s linux-image-6.11.0-8-generic* linux-image-6.12.0-16-generic* 154s linux-modules-6.11.0-8-generic* linux-modules-6.12.0-16-generic* 154s linux-modules-extra-6.12.0-16-generic* linux-tools-6.11.0-8* 154s linux-tools-6.11.0-8-generic* linux-tools-6.12.0-16* 154s linux-tools-6.12.0-16-generic* 154s 0 upgraded, 0 newly installed, 18 to remove and 5 not upgraded. 154s After this operation, 545 MB disk space will be freed. 154s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 148643 files and directories currently installed.) 154s Removing libnl-genl-3-200:amd64 (3.7.0-1) ... 154s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 154s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 154s Removing libpython3.12t64:amd64 (3.12.9-1) ... 154s Removing libpython3.12-stdlib:amd64 (3.12.9-1) ... 154s Removing libnsl2:amd64 (1.3.0-3build3) ... 154s Removing libpython3.12-minimal:amd64 (3.12.9-1) ... 154s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 155s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 157s Removing linux-headers-6.12.0-16-generic (6.12.0-16.16) ... 157s Removing linux-headers-6.12.0-16 (6.12.0-16.16) ... 160s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 160s /etc/kernel/postrm.d/initramfs-tools: 160s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 160s /etc/kernel/postrm.d/zz-update-grub: 160s Sourcing file `/etc/default/grub' 160s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 160s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 160s Generating grub configuration file ... 160s Found linux image: /boot/vmlinuz-6.14.0-10-generic 160s Found initrd image: /boot/initrd.img-6.14.0-10-generic 161s Found linux image: /boot/vmlinuz-6.12.0-16-generic 161s Found initrd image: /boot/initrd.img-6.12.0-16-generic 161s Warning: os-prober will not be executed to detect other bootable partitions. 161s Systems on them will not be added to the GRUB boot configuration. 161s Check GRUB_DISABLE_OS_PROBER documentation entry. 161s Adding boot menu entry for UEFI Firmware Settings ... 161s done 161s Removing linux-image-6.12.0-16-generic (6.12.0-16.16) ... 161s W: Removing the running kernel 161s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic 161s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic 161s /etc/kernel/postrm.d/initramfs-tools: 161s update-initramfs: Deleting /boot/initrd.img-6.12.0-16-generic 161s /etc/kernel/postrm.d/zz-update-grub: 161s Sourcing file `/etc/default/grub' 161s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 161s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 161s Generating grub configuration file ... 161s Found linux image: /boot/vmlinuz-6.14.0-10-generic 161s Found initrd image: /boot/initrd.img-6.14.0-10-generic 162s Warning: os-prober will not be executed to detect other bootable partitions. 162s Systems on them will not be added to the GRUB boot configuration. 162s Check GRUB_DISABLE_OS_PROBER documentation entry. 162s Adding boot menu entry for UEFI Firmware Settings ... 162s done 162s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 162s Removing linux-modules-extra-6.12.0-16-generic (6.12.0-16.16) ... 164s Removing linux-modules-6.12.0-16-generic (6.12.0-16.16) ... 164s Removing linux-tools-6.12.0-16-generic (6.12.0-16.16) ... 164s Removing linux-tools-6.12.0-16 (6.12.0-16.16) ... 164s Processing triggers for libc-bin (2.41-1ubuntu1) ... 164s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76972 files and directories currently installed.) 164s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 164s Purging configuration files for libpython3.12-minimal:amd64 (3.12.9-1) ... 164s Purging configuration files for linux-modules-extra-6.12.0-16-generic (6.12.0-16.16) ... 164s Purging configuration files for linux-modules-6.12.0-16-generic (6.12.0-16.16) ... 164s dpkg: warning: while removing linux-modules-6.12.0-16-generic, directory '/lib/modules/6.12.0-16-generic' not empty so not removed 164s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 164s Purging configuration files for linux-image-6.12.0-16-generic (6.12.0-16.16) ... 164s rmdir: failed to remove '/lib/modules/6.12.0-16-generic': Directory not empty 164s autopkgtest [22:04:42]: upgrading testbed (apt dist-upgrade and autopurge) 164s Reading package lists... 165s Building dependency tree... 165s Reading state information... 165s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 165s Starting 2 pkgProblemResolver with broken count: 0 165s Done 166s Entering ResolveByKeep 166s 166s Calculating upgrade... 166s The following packages will be upgraded: 166s libc-bin libc-dev-bin libc6 libc6-dev locales 166s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 166s Need to get 10.5 MB of archives. 166s After this operation, 1024 B of additional disk space will be used. 166s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6-dev amd64 2.41-1ubuntu2 [2183 kB] 167s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-dev-bin amd64 2.41-1ubuntu2 [24.7 kB] 167s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6 amd64 2.41-1ubuntu2 [3327 kB] 167s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-bin amd64 2.41-1ubuntu2 [700 kB] 167s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 locales all 2.41-1ubuntu2 [4246 kB] 167s Preconfiguring packages ... 168s Fetched 10.5 MB in 1s (8991 kB/s) 168s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 168s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_amd64.deb ... 168s Unpacking libc6-dev:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 168s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_amd64.deb ... 168s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 168s Preparing to unpack .../libc6_2.41-1ubuntu2_amd64.deb ... 168s Unpacking libc6:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 168s Setting up libc6:amd64 (2.41-1ubuntu2) ... 168s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 168s Preparing to unpack .../libc-bin_2.41-1ubuntu2_amd64.deb ... 168s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 169s Setting up libc-bin (2.41-1ubuntu2) ... 169s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 169s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 169s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 169s Setting up locales (2.41-1ubuntu2) ... 170s Generating locales (this might take a while)... 171s en_US.UTF-8... done 171s Generation complete. 171s Setting up libc-dev-bin (2.41-1ubuntu2) ... 171s Setting up libc6-dev:amd64 (2.41-1ubuntu2) ... 171s Processing triggers for man-db (2.13.0-1) ... 172s Processing triggers for systemd (257.3-1ubuntu3) ... 173s Reading package lists... 173s Building dependency tree... 173s Reading state information... 173s Starting pkgProblemResolver with broken count: 0 173s Starting 2 pkgProblemResolver with broken count: 0 173s Done 173s Solving dependencies... 174s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 174s autopkgtest [22:04:52]: rebooting testbed after setup commands that affected boot 197s autopkgtest [22:05:15]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 16:07:00 UTC 2025 199s autopkgtest [22:05:17]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-adephylo 201s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-adephylo 1.1-16-1 (dsc) [2181 B] 201s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-adephylo 1.1-16-1 (tar) [522 kB] 201s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-adephylo 1.1-16-1 (diff) [3564 B] 201s gpgv: Signature made Thu Oct 12 09:10:55 2023 UTC 201s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 201s gpgv: issuer "tille@debian.org" 201s gpgv: Can't check signature: No public key 201s dpkg-source: warning: cannot verify inline signature for ./r-cran-adephylo_1.1-16-1.dsc: no acceptable signature found 202s autopkgtest [22:05:20]: testing package r-cran-adephylo version 1.1-16-1 202s autopkgtest [22:05:20]: build not needed 204s autopkgtest [22:05:22]: test run-unit-test: preparing testbed 204s Reading package lists... 204s Building dependency tree... 204s Reading state information... 204s Starting pkgProblemResolver with broken count: 0 204s Starting 2 pkgProblemResolver with broken count: 0 204s Done 205s The following NEW packages will be installed: 205s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 205s fonts-font-awesome fonts-glyphicons-halflings javascript-common libamd3 205s libblas3 libcairo2 libcolamd3 libdatrie1 libdeflate0 libfontconfig1 205s libgfortran5 libglpk40 libgomp1 libgraphite2-3 libharfbuzz0b libice6 205s libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-bootstrap4 libjs-d3 205s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 205s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-microplugin.js 205s libjs-popper.js libjs-sifter.js libjs-twitter-bootstrap-datepicker 205s liblapack3 liblerc4 libltdl7 libpango-1.0-0 libpangocairo-1.0-0 205s libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 205s libsuitesparseconfig7 libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6 205s libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 205s littler node-bootstrap-sass node-html5shiv node-normalize.css r-base-core 205s r-cran-ade4 r-cran-adegenet r-cran-adephylo r-cran-ape r-cran-askpass 205s r-cran-base64enc r-cran-boot r-cran-brio r-cran-bslib r-cran-cachem 205s r-cran-callr r-cran-cli r-cran-cluster r-cran-colorspace r-cran-commonmark 205s r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-desc r-cran-diffobj 205s r-cran-digest r-cran-dplyr r-cran-evaluate r-cran-fansi r-cran-farver 205s r-cran-fastmap r-cran-fontawesome r-cran-fs r-cran-generics r-cran-ggplot2 205s r-cran-glue r-cran-gtable r-cran-hms r-cran-htmltools r-cran-httpuv 205s r-cran-httr r-cran-igraph r-cran-isoband r-cran-jquerylib r-cran-jsonlite 205s r-cran-labeling r-cran-later r-cran-lattice r-cran-lifecycle r-cran-littler 205s r-cran-magrittr r-cran-mass r-cran-matrix r-cran-memoise r-cran-mgcv 205s r-cran-mime r-cran-munsell r-cran-nlme r-cran-openssl r-cran-permute 205s r-cran-phylobase r-cran-pillar r-cran-pixmap r-cran-pkgbuild 205s r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plyr r-cran-praise 205s r-cran-prettyunits r-cran-processx r-cran-progress r-cran-promises r-cran-ps 205s r-cran-purrr r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp 205s r-cran-rcpparmadillo r-cran-reshape2 r-cran-rlang r-cran-rncl r-cran-rnexml 205s r-cran-rprojroot r-cran-sass r-cran-scales r-cran-segmented r-cran-seqinr 205s r-cran-shiny r-cran-sourcetools r-cran-sp r-cran-stringi r-cran-stringr 205s r-cran-sys r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect 205s r-cran-utf8 r-cran-uuid r-cran-vctrs r-cran-vegan r-cran-viridislite 205s r-cran-waldo r-cran-withr r-cran-xml r-cran-xml2 r-cran-xtable unzip 205s x11-common xdg-utils zip 205s 0 upgraded, 174 newly installed, 0 to remove and 0 not upgraded. 205s Need to get 136 MB of archives. 205s After this operation, 270 MB of additional disk space will be used. 205s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 206s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 206s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-2ubuntu1 [37.4 kB] 206s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-2ubuntu1 [164 kB] 206s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-2ubuntu1 [180 kB] 206s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 206s Get:7 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 206s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 12 [5216 B] 206s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 15-20250222-0ubuntu1 [148 kB] 206s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libsuitesparseconfig7 amd64 1:7.8.3+dfsg-3 [13.5 kB] 206s Get:11 http://ftpmaster.internal/ubuntu plucky/universe amd64 libamd3 amd64 1:7.8.3+dfsg-3 [31.0 kB] 206s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 206s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 206s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 206s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 206s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 206s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 206s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 libcolamd3 amd64 1:7.8.3+dfsg-3 [19.5 kB] 206s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 206s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB] 206s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 15-20250222-0ubuntu1 [919 kB] 206s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl7 amd64 2.5.4-4 [46.5 kB] 206s Get:23 http://ftpmaster.internal/ubuntu plucky/universe amd64 libglpk40 amd64 5.0-1build2 [369 kB] 206s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 206s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB] 206s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 206s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 206s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 206s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 206s Get:30 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 206s Get:31 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 206s Get:32 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 206s Get:33 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 206s Get:34 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 206s Get:35 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 206s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 206s Get:37 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 206s Get:38 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 206s Get:39 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 206s Get:40 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 206s Get:41 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 206s Get:42 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 206s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 206s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 206s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 206s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 206s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.56.2-1 [255 kB] 206s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.56.2-1 [52.6 kB] 206s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.56.2-1 [29.1 kB] 206s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB] 206s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB] 206s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 206s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 206s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB] 206s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 206s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 206s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 206s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 206s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 206s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB] 206s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 206s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu2 [185 kB] 206s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 207s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 207s Get:65 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.3-1 [28.9 MB] 207s Get:66 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-2 [96.6 kB] 207s Get:67 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-2 [2554 B] 207s Get:68 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 207s Get:69 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 207s Get:70 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 207s Get:71 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mass amd64 7.3-64-1 [1114 kB] 207s Get:72 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pixmap all 0.4-13-1 [213 kB] 207s Get:73 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 207s Get:74 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sp amd64 1:2.2-0+dfsg-1 [1444 kB] 207s Get:75 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 207s Get:76 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.14-1 [1998 kB] 208s Get:77 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpparmadillo amd64 14.2.3-1-1 [864 kB] 208s Get:78 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ade4 amd64 1.7-23-1 [5414 kB] 208s Get:79 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB] 208s Get:80 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 208s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.5-1 [1719 kB] 208s Get:82 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 208s Get:83 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 208s Get:84 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrix amd64 1.7-3-1 [4349 kB] 208s Get:85 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 208s Get:86 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 208s Get:87 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cpp11 all 0.5.2-1 [233 kB] 208s Get:88 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-igraph amd64 2.1.4-1 [5357 kB] 208s Get:89 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nlme amd64 3.1.167-1 [2320 kB] 208s Get:90 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB] 208s Get:91 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ape amd64 5.8-1-1 [2918 kB] 208s Get:92 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB] 208s Get:93 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 208s Get:94 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB] 208s Get:95 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB] 208s Get:96 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 208s Get:97 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 208s Get:98 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB] 208s Get:99 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 209s Get:100 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 209s Get:101 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 209s Get:102 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 209s Get:103 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 209s Get:104 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB] 209s Get:105 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 209s Get:106 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.2-2 [137 kB] 209s Get:107 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 209s Get:108 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 209s Get:109 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 209s Get:110 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB] 209s Get:111 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 209s Get:112 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 209s Get:113 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 209s Get:114 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 209s Get:115 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 210s Get:116 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 210s Get:117 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 210s Get:118 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB] 210s Get:119 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB] 210s Get:120 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 210s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colorspace amd64 2.1-1+dfsg-1 [1563 kB] 210s Get:122 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-munsell all 0.5.1-1 [213 kB] 210s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 210s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridislite all 0.4.2-2 [1088 kB] 210s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scales all 1.3.0-1 [603 kB] 210s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 210s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 210s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 210s Get:129 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB] 210s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 210s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-segmented all 2.1-4-1 [1376 kB] 210s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-seqinr amd64 4.2-36-1 [4015 kB] 210s Get:133 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-boot all 1.3-31-1 [635 kB] 210s Get:134 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB] 210s Get:135 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringi amd64 1.8.4-1build1 [927 kB] 210s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 210s Get:137 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reshape2 amd64 1.4.4-2build1 [114 kB] 210s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB] 210s Get:139 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB] 210s Get:140 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB] 211s Get:141 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-permute all 0.9-7-1 [228 kB] 211s Get:142 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cluster amd64 2.1.8.1-1 [579 kB] 211s Get:143 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vegan amd64 2.6-10+dfsg-1ubuntu2 [3145 kB] 211s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-adegenet amd64 2.1.11-1 [2728 kB] 211s Get:145 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-hms all 1.1.3-1 [96.5 kB] 211s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-prettyunits all 1.2.0-1 [162 kB] 211s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-progress all 1.2.3-1 [91.9 kB] 211s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rncl amd64 0.8.7-1 [513 kB] 211s Get:149 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xml amd64 3.99-0.18-1 [1748 kB] 211s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-curl amd64 6.2.1+dfsg-1ubuntu1 [197 kB] 211s Get:151 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB] 211s Get:152 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB] 211s Get:153 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-openssl amd64 2.3.2+dfsg-1 [407 kB] 211s Get:154 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 211s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-uuid amd64 1.2-1-1 [48.5 kB] 211s Get:156 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-purrr amd64 1.0.4-1 [552 kB] 211s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 211s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xml2 amd64 1.3.7-1 [334 kB] 211s Get:159 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rnexml all 2.4.11+ds-1 [744 kB] 211s Get:160 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-phylobase amd64 0.8.12-1 [693 kB] 211s Get:161 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-adephylo amd64 1.1-16-1 [591 kB] 211s Get:162 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 211s Get:163 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ps amd64 1.9.0-1 [408 kB] 211s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-processx amd64 3.8.6-1 [365 kB] 211s Get:165 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 211s Get:166 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 211s Get:167 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 211s Get:168 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 1.0.3-1 [114 kB] 211s Get:169 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgbuild all 1.4.6-1 [213 kB] 211s Get:170 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rprojroot all 2.0.4-2 [125 kB] 211s Get:171 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgload all 1.4.0-1 [247 kB] 211s Get:172 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 211s Get:173 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-waldo all 0.6.1-2 [150 kB] 211s Get:174 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-testthat amd64 3.2.3-1 [1651 kB] 212s Preconfiguring packages ... 212s Fetched 136 MB in 6s (21.6 MB/s) 212s Selecting previously unselected package fonts-dejavu-mono. 212s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 212s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8_all.deb ... 212s Unpacking fonts-dejavu-mono (2.37-8) ... 212s Selecting previously unselected package fonts-dejavu-core. 212s Preparing to unpack .../001-fonts-dejavu-core_2.37-8_all.deb ... 212s Unpacking fonts-dejavu-core (2.37-8) ... 212s Selecting previously unselected package fontconfig-config. 212s Preparing to unpack .../002-fontconfig-config_2.15.0-2ubuntu1_amd64.deb ... 213s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 213s Selecting previously unselected package libfontconfig1:amd64. 213s Preparing to unpack .../003-libfontconfig1_2.15.0-2ubuntu1_amd64.deb ... 213s Unpacking libfontconfig1:amd64 (2.15.0-2ubuntu1) ... 213s Selecting previously unselected package fontconfig. 213s Preparing to unpack .../004-fontconfig_2.15.0-2ubuntu1_amd64.deb ... 213s Unpacking fontconfig (2.15.0-2ubuntu1) ... 213s Selecting previously unselected package fonts-font-awesome. 213s Preparing to unpack .../005-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 213s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 213s Selecting previously unselected package fonts-glyphicons-halflings. 213s Preparing to unpack .../006-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 213s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 213s Selecting previously unselected package javascript-common. 213s Preparing to unpack .../007-javascript-common_12_all.deb ... 213s Unpacking javascript-common (12) ... 213s Selecting previously unselected package libgomp1:amd64. 213s Preparing to unpack .../008-libgomp1_15-20250222-0ubuntu1_amd64.deb ... 213s Unpacking libgomp1:amd64 (15-20250222-0ubuntu1) ... 213s Selecting previously unselected package libsuitesparseconfig7:amd64. 213s Preparing to unpack .../009-libsuitesparseconfig7_1%3a7.8.3+dfsg-3_amd64.deb ... 213s Unpacking libsuitesparseconfig7:amd64 (1:7.8.3+dfsg-3) ... 213s Selecting previously unselected package libamd3:amd64. 213s Preparing to unpack .../010-libamd3_1%3a7.8.3+dfsg-3_amd64.deb ... 213s Unpacking libamd3:amd64 (1:7.8.3+dfsg-3) ... 213s Selecting previously unselected package libblas3:amd64. 213s Preparing to unpack .../011-libblas3_3.12.1-2_amd64.deb ... 213s Unpacking libblas3:amd64 (3.12.1-2) ... 213s Selecting previously unselected package libpixman-1-0:amd64. 213s Preparing to unpack .../012-libpixman-1-0_0.44.0-3_amd64.deb ... 213s Unpacking libpixman-1-0:amd64 (0.44.0-3) ... 213s Selecting previously unselected package libxcb-render0:amd64. 213s Preparing to unpack .../013-libxcb-render0_1.17.0-2_amd64.deb ... 213s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 213s Selecting previously unselected package libxcb-shm0:amd64. 213s Preparing to unpack .../014-libxcb-shm0_1.17.0-2_amd64.deb ... 213s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 213s Selecting previously unselected package libxrender1:amd64. 213s Preparing to unpack .../015-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 213s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 213s Selecting previously unselected package libcairo2:amd64. 213s Preparing to unpack .../016-libcairo2_1.18.2-2_amd64.deb ... 213s Unpacking libcairo2:amd64 (1.18.2-2) ... 213s Selecting previously unselected package libcolamd3:amd64. 213s Preparing to unpack .../017-libcolamd3_1%3a7.8.3+dfsg-3_amd64.deb ... 213s Unpacking libcolamd3:amd64 (1:7.8.3+dfsg-3) ... 213s Selecting previously unselected package libdatrie1:amd64. 213s Preparing to unpack .../018-libdatrie1_0.2.13-3build1_amd64.deb ... 213s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 213s Selecting previously unselected package libdeflate0:amd64. 213s Preparing to unpack .../019-libdeflate0_1.23-1_amd64.deb ... 213s Unpacking libdeflate0:amd64 (1.23-1) ... 213s Selecting previously unselected package libgfortran5:amd64. 213s Preparing to unpack .../020-libgfortran5_15-20250222-0ubuntu1_amd64.deb ... 213s Unpacking libgfortran5:amd64 (15-20250222-0ubuntu1) ... 213s Selecting previously unselected package libltdl7:amd64. 213s Preparing to unpack .../021-libltdl7_2.5.4-4_amd64.deb ... 213s Unpacking libltdl7:amd64 (2.5.4-4) ... 213s Selecting previously unselected package libglpk40:amd64. 213s Preparing to unpack .../022-libglpk40_5.0-1build2_amd64.deb ... 213s Unpacking libglpk40:amd64 (5.0-1build2) ... 213s Selecting previously unselected package libgraphite2-3:amd64. 213s Preparing to unpack .../023-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 213s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 213s Selecting previously unselected package libharfbuzz0b:amd64. 213s Preparing to unpack .../024-libharfbuzz0b_10.2.0-1_amd64.deb ... 213s Unpacking libharfbuzz0b:amd64 (10.2.0-1) ... 213s Selecting previously unselected package x11-common. 213s Preparing to unpack .../025-x11-common_1%3a7.7+23ubuntu3_all.deb ... 213s Unpacking x11-common (1:7.7+23ubuntu3) ... 213s Selecting previously unselected package libice6:amd64. 213s Preparing to unpack .../026-libice6_2%3a1.1.1-1_amd64.deb ... 213s Unpacking libice6:amd64 (2:1.1.1-1) ... 213s Selecting previously unselected package libjpeg-turbo8:amd64. 213s Preparing to unpack .../027-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ... 213s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 213s Selecting previously unselected package libjpeg8:amd64. 213s Preparing to unpack .../028-libjpeg8_8c-2ubuntu11_amd64.deb ... 213s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 213s Selecting previously unselected package libjs-bootstrap. 213s Preparing to unpack .../029-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 213s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 213s Selecting previously unselected package libjs-popper.js. 213s Preparing to unpack .../030-libjs-popper.js_1.16.1+ds-6_all.deb ... 213s Unpacking libjs-popper.js (1.16.1+ds-6) ... 213s Selecting previously unselected package libjs-bootstrap4. 213s Preparing to unpack .../031-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 213s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 214s Selecting previously unselected package libjs-d3. 214s Preparing to unpack .../032-libjs-d3_3.5.17-4_all.deb ... 214s Unpacking libjs-d3 (3.5.17-4) ... 214s Selecting previously unselected package libjs-es5-shim. 214s Preparing to unpack .../033-libjs-es5-shim_4.6.7-2_all.deb ... 214s Unpacking libjs-es5-shim (4.6.7-2) ... 214s Selecting previously unselected package libjs-highlight.js. 214s Preparing to unpack .../034-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 214s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 214s Selecting previously unselected package libjs-jquery. 214s Preparing to unpack .../035-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 214s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 214s Selecting previously unselected package libjs-jquery-datatables. 214s Preparing to unpack .../036-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 214s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 214s Selecting previously unselected package libjs-sifter.js. 214s Preparing to unpack .../037-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 214s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 214s Selecting previously unselected package libjs-microplugin.js. 214s Preparing to unpack .../038-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 214s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 214s Selecting previously unselected package libjs-jquery-selectize.js. 214s Preparing to unpack .../039-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 214s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 214s Selecting previously unselected package libjs-jquery-ui. 214s Preparing to unpack .../040-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 214s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 214s Selecting previously unselected package libjs-json. 214s Preparing to unpack .../041-libjs-json_0~20221030+~1.0.8-1_all.deb ... 214s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 214s Selecting previously unselected package liblapack3:amd64. 214s Preparing to unpack .../042-liblapack3_3.12.1-2_amd64.deb ... 214s Unpacking liblapack3:amd64 (3.12.1-2) ... 214s Selecting previously unselected package liblerc4:amd64. 214s Preparing to unpack .../043-liblerc4_4.0.0+ds-5ubuntu1_amd64.deb ... 214s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 214s Selecting previously unselected package libthai-data. 214s Preparing to unpack .../044-libthai-data_0.1.29-2build1_all.deb ... 214s Unpacking libthai-data (0.1.29-2build1) ... 214s Selecting previously unselected package libthai0:amd64. 214s Preparing to unpack .../045-libthai0_0.1.29-2build1_amd64.deb ... 214s Unpacking libthai0:amd64 (0.1.29-2build1) ... 214s Selecting previously unselected package libpango-1.0-0:amd64. 214s Preparing to unpack .../046-libpango-1.0-0_1.56.2-1_amd64.deb ... 214s Unpacking libpango-1.0-0:amd64 (1.56.2-1) ... 214s Selecting previously unselected package libpangoft2-1.0-0:amd64. 214s Preparing to unpack .../047-libpangoft2-1.0-0_1.56.2-1_amd64.deb ... 214s Unpacking libpangoft2-1.0-0:amd64 (1.56.2-1) ... 214s Selecting previously unselected package libpangocairo-1.0-0:amd64. 214s Preparing to unpack .../048-libpangocairo-1.0-0_1.56.2-1_amd64.deb ... 214s Unpacking libpangocairo-1.0-0:amd64 (1.56.2-1) ... 214s Selecting previously unselected package libpaper2:amd64. 214s Preparing to unpack .../049-libpaper2_2.2.5-0.3_amd64.deb ... 214s Unpacking libpaper2:amd64 (2.2.5-0.3) ... 214s Selecting previously unselected package libpaper-utils. 214s Preparing to unpack .../050-libpaper-utils_2.2.5-0.3_amd64.deb ... 214s Unpacking libpaper-utils (2.2.5-0.3) ... 214s Selecting previously unselected package libsharpyuv0:amd64. 214s Preparing to unpack .../051-libsharpyuv0_1.5.0-0.1_amd64.deb ... 214s Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ... 214s Selecting previously unselected package libsm6:amd64. 214s Preparing to unpack .../052-libsm6_2%3a1.2.4-1_amd64.deb ... 214s Unpacking libsm6:amd64 (2:1.2.4-1) ... 214s Selecting previously unselected package libtcl8.6:amd64. 214s Preparing to unpack .../053-libtcl8.6_8.6.16+dfsg-1_amd64.deb ... 214s Unpacking libtcl8.6:amd64 (8.6.16+dfsg-1) ... 214s Selecting previously unselected package libjbig0:amd64. 214s Preparing to unpack .../054-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 214s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 214s Selecting previously unselected package libwebp7:amd64. 214s Preparing to unpack .../055-libwebp7_1.5.0-0.1_amd64.deb ... 214s Unpacking libwebp7:amd64 (1.5.0-0.1) ... 214s Selecting previously unselected package libtiff6:amd64. 214s Preparing to unpack .../056-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ... 214s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 215s Selecting previously unselected package libxft2:amd64. 215s Preparing to unpack .../057-libxft2_2.3.6-1build1_amd64.deb ... 215s Unpacking libxft2:amd64 (2.3.6-1build1) ... 215s Selecting previously unselected package libxss1:amd64. 215s Preparing to unpack .../058-libxss1_1%3a1.2.3-1build3_amd64.deb ... 215s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 215s Selecting previously unselected package libtk8.6:amd64. 215s Preparing to unpack .../059-libtk8.6_8.6.16-1_amd64.deb ... 215s Unpacking libtk8.6:amd64 (8.6.16-1) ... 215s Selecting previously unselected package libxt6t64:amd64. 215s Preparing to unpack .../060-libxt6t64_1%3a1.2.1-1.2build1_amd64.deb ... 215s Unpacking libxt6t64:amd64 (1:1.2.1-1.2build1) ... 215s Selecting previously unselected package zip. 215s Preparing to unpack .../061-zip_3.0-14ubuntu2_amd64.deb ... 215s Unpacking zip (3.0-14ubuntu2) ... 215s Selecting previously unselected package unzip. 215s Preparing to unpack .../062-unzip_6.0-28ubuntu6_amd64.deb ... 215s Unpacking unzip (6.0-28ubuntu6) ... 215s Selecting previously unselected package xdg-utils. 215s Preparing to unpack .../063-xdg-utils_1.2.1-2ubuntu1_all.deb ... 215s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 215s Selecting previously unselected package r-base-core. 215s Preparing to unpack .../064-r-base-core_4.4.3-1_amd64.deb ... 215s Unpacking r-base-core (4.4.3-1) ... 215s Selecting previously unselected package r-cran-littler. 215s Preparing to unpack .../065-r-cran-littler_0.3.20-2_amd64.deb ... 215s Unpacking r-cran-littler (0.3.20-2) ... 215s Selecting previously unselected package littler. 215s Preparing to unpack .../066-littler_0.3.20-2_all.deb ... 215s Unpacking littler (0.3.20-2) ... 215s Selecting previously unselected package node-bootstrap-sass. 215s Preparing to unpack .../067-node-bootstrap-sass_3.4.3-2_all.deb ... 215s Unpacking node-bootstrap-sass (3.4.3-2) ... 215s Selecting previously unselected package node-html5shiv. 215s Preparing to unpack .../068-node-html5shiv_3.7.3+dfsg-5_all.deb ... 215s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 215s Selecting previously unselected package node-normalize.css. 215s Preparing to unpack .../069-node-normalize.css_8.0.1-5_all.deb ... 215s Unpacking node-normalize.css (8.0.1-5) ... 215s Selecting previously unselected package r-cran-mass. 215s Preparing to unpack .../070-r-cran-mass_7.3-64-1_amd64.deb ... 215s Unpacking r-cran-mass (7.3-64-1) ... 215s Selecting previously unselected package r-cran-pixmap. 215s Preparing to unpack .../071-r-cran-pixmap_0.4-13-1_all.deb ... 215s Unpacking r-cran-pixmap (0.4-13-1) ... 215s Selecting previously unselected package r-cran-lattice. 215s Preparing to unpack .../072-r-cran-lattice_0.22-6-1_amd64.deb ... 215s Unpacking r-cran-lattice (0.22-6-1) ... 215s Selecting previously unselected package r-cran-sp. 215s Preparing to unpack .../073-r-cran-sp_1%3a2.2-0+dfsg-1_amd64.deb ... 215s Unpacking r-cran-sp (1:2.2-0+dfsg-1) ... 216s Selecting previously unselected package r-cran-pkgkitten. 216s Preparing to unpack .../074-r-cran-pkgkitten_0.2.4-1_all.deb ... 216s Unpacking r-cran-pkgkitten (0.2.4-1) ... 216s Selecting previously unselected package r-cran-rcpp. 216s Preparing to unpack .../075-r-cran-rcpp_1.0.14-1_amd64.deb ... 216s Unpacking r-cran-rcpp (1.0.14-1) ... 216s Selecting previously unselected package r-cran-rcpparmadillo. 216s Preparing to unpack .../076-r-cran-rcpparmadillo_14.2.3-1-1_amd64.deb ... 216s Unpacking r-cran-rcpparmadillo (14.2.3-1-1) ... 216s Selecting previously unselected package r-cran-ade4. 216s Preparing to unpack .../077-r-cran-ade4_1.7-23-1_amd64.deb ... 216s Unpacking r-cran-ade4 (1.7-23-1) ... 216s Selecting previously unselected package r-cran-cli. 216s Preparing to unpack .../078-r-cran-cli_3.6.4-1_amd64.deb ... 216s Unpacking r-cran-cli (3.6.4-1) ... 216s Selecting previously unselected package r-cran-glue. 216s Preparing to unpack .../079-r-cran-glue_1.8.0-1_amd64.deb ... 216s Unpacking r-cran-glue (1.8.0-1) ... 216s Selecting previously unselected package r-cran-rlang. 216s Preparing to unpack .../080-r-cran-rlang_1.1.5-1_amd64.deb ... 216s Unpacking r-cran-rlang (1.1.5-1) ... 216s Selecting previously unselected package r-cran-lifecycle. 216s Preparing to unpack .../081-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 216s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 216s Selecting previously unselected package r-cran-magrittr. 216s Preparing to unpack .../082-r-cran-magrittr_2.0.3-1_amd64.deb ... 216s Unpacking r-cran-magrittr (2.0.3-1) ... 216s Selecting previously unselected package r-cran-matrix. 216s Preparing to unpack .../083-r-cran-matrix_1.7-3-1_amd64.deb ... 216s Unpacking r-cran-matrix (1.7-3-1) ... 216s Selecting previously unselected package r-cran-pkgconfig. 216s Preparing to unpack .../084-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 216s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 216s Selecting previously unselected package r-cran-vctrs. 216s Preparing to unpack .../085-r-cran-vctrs_0.6.5-1_amd64.deb ... 216s Unpacking r-cran-vctrs (0.6.5-1) ... 216s Selecting previously unselected package r-cran-cpp11. 216s Preparing to unpack .../086-r-cran-cpp11_0.5.2-1_all.deb ... 216s Unpacking r-cran-cpp11 (0.5.2-1) ... 216s Selecting previously unselected package r-cran-igraph. 216s Preparing to unpack .../087-r-cran-igraph_2.1.4-1_amd64.deb ... 216s Unpacking r-cran-igraph (2.1.4-1) ... 217s Selecting previously unselected package r-cran-nlme. 217s Preparing to unpack .../088-r-cran-nlme_3.1.167-1_amd64.deb ... 217s Unpacking r-cran-nlme (3.1.167-1) ... 217s Selecting previously unselected package r-cran-digest. 217s Preparing to unpack .../089-r-cran-digest_0.6.37-1_amd64.deb ... 217s Unpacking r-cran-digest (0.6.37-1) ... 217s Selecting previously unselected package r-cran-ape. 217s Preparing to unpack .../090-r-cran-ape_5.8-1-1_amd64.deb ... 217s Unpacking r-cran-ape (5.8-1-1) ... 217s Selecting previously unselected package r-cran-later. 217s Preparing to unpack .../091-r-cran-later_1.4.1+dfsg-1_amd64.deb ... 217s Unpacking r-cran-later (1.4.1+dfsg-1) ... 217s Selecting previously unselected package r-cran-fastmap. 217s Preparing to unpack .../092-r-cran-fastmap_1.2.0-1_amd64.deb ... 217s Unpacking r-cran-fastmap (1.2.0-1) ... 217s Selecting previously unselected package r-cran-r6. 217s Preparing to unpack .../093-r-cran-r6_2.6.1-1_all.deb ... 217s Unpacking r-cran-r6 (2.6.1-1) ... 217s Selecting previously unselected package r-cran-promises. 217s Preparing to unpack .../094-r-cran-promises_1.3.2+dfsg-1_amd64.deb ... 217s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 217s Selecting previously unselected package r-cran-httpuv. 217s Preparing to unpack .../095-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 217s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 217s Selecting previously unselected package r-cran-mime. 217s Preparing to unpack .../096-r-cran-mime_0.12-2_amd64.deb ... 217s Unpacking r-cran-mime (0.12-2) ... 217s Selecting previously unselected package r-cran-jsonlite. 217s Preparing to unpack .../097-r-cran-jsonlite_1.9.1+dfsg-1_amd64.deb ... 217s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 217s Selecting previously unselected package r-cran-xtable. 217s Preparing to unpack .../098-r-cran-xtable_1%3a1.8-4-2_all.deb ... 217s Unpacking r-cran-xtable (1:1.8-4-2) ... 217s Selecting previously unselected package r-cran-base64enc. 217s Preparing to unpack .../099-r-cran-base64enc_0.1-3-3_amd64.deb ... 217s Unpacking r-cran-base64enc (0.1-3-3) ... 217s Selecting previously unselected package r-cran-htmltools. 217s Preparing to unpack .../100-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 217s Unpacking r-cran-htmltools (0.5.8.1-1) ... 217s Selecting previously unselected package r-cran-fontawesome. 217s Preparing to unpack .../101-r-cran-fontawesome_0.5.3-1_all.deb ... 217s Unpacking r-cran-fontawesome (0.5.3-1) ... 217s Selecting previously unselected package r-cran-sourcetools. 217s Preparing to unpack .../102-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 217s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 217s Selecting previously unselected package r-cran-crayon. 217s Preparing to unpack .../103-r-cran-crayon_1.5.3-1_all.deb ... 217s Unpacking r-cran-crayon (1.5.3-1) ... 217s Selecting previously unselected package r-cran-withr. 217s Preparing to unpack .../104-r-cran-withr_3.0.2+dfsg-1_all.deb ... 217s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 217s Selecting previously unselected package r-cran-commonmark. 217s Preparing to unpack .../105-r-cran-commonmark_1.9.2-2_amd64.deb ... 217s Unpacking r-cran-commonmark (1.9.2-2) ... 217s Selecting previously unselected package r-cran-cachem. 217s Preparing to unpack .../106-r-cran-cachem_1.1.0-1_amd64.deb ... 217s Unpacking r-cran-cachem (1.1.0-1) ... 217s Selecting previously unselected package r-cran-jquerylib. 217s Preparing to unpack .../107-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 217s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 217s Selecting previously unselected package r-cran-memoise. 217s Preparing to unpack .../108-r-cran-memoise_2.0.1-1_all.deb ... 217s Unpacking r-cran-memoise (2.0.1-1) ... 217s Selecting previously unselected package r-cran-fs. 217s Preparing to unpack .../109-r-cran-fs_1.6.5+dfsg-1_amd64.deb ... 217s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 217s Selecting previously unselected package r-cran-rappdirs. 217s Preparing to unpack .../110-r-cran-rappdirs_0.3.3-1_amd64.deb ... 217s Unpacking r-cran-rappdirs (0.3.3-1) ... 218s Selecting previously unselected package r-cran-sass. 218s Preparing to unpack .../111-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 218s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 218s Selecting previously unselected package r-cran-bslib. 218s Preparing to unpack .../112-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 218s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 218s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 218s Preparing to unpack .../113-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 218s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 218s Selecting previously unselected package r-cran-shiny. 218s Preparing to unpack .../114-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 218s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 218s Selecting previously unselected package r-cran-gtable. 218s Preparing to unpack .../115-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 218s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 218s Selecting previously unselected package r-cran-isoband. 218s Preparing to unpack .../116-r-cran-isoband_0.2.7-1_amd64.deb ... 218s Unpacking r-cran-isoband (0.2.7-1) ... 218s Selecting previously unselected package r-cran-mgcv. 218s Preparing to unpack .../117-r-cran-mgcv_1.9-1-1_amd64.deb ... 218s Unpacking r-cran-mgcv (1.9-1-1) ... 218s Selecting previously unselected package r-cran-farver. 218s Preparing to unpack .../118-r-cran-farver_2.1.2-1_amd64.deb ... 218s Unpacking r-cran-farver (2.1.2-1) ... 218s Selecting previously unselected package r-cran-labeling. 218s Preparing to unpack .../119-r-cran-labeling_0.4.3-1_all.deb ... 218s Unpacking r-cran-labeling (0.4.3-1) ... 218s Selecting previously unselected package r-cran-colorspace. 218s Preparing to unpack .../120-r-cran-colorspace_2.1-1+dfsg-1_amd64.deb ... 218s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 218s Selecting previously unselected package r-cran-munsell. 218s Preparing to unpack .../121-r-cran-munsell_0.5.1-1_all.deb ... 218s Unpacking r-cran-munsell (0.5.1-1) ... 218s Selecting previously unselected package r-cran-rcolorbrewer. 218s Preparing to unpack .../122-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 218s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 218s Selecting previously unselected package r-cran-viridislite. 218s Preparing to unpack .../123-r-cran-viridislite_0.4.2-2_all.deb ... 218s Unpacking r-cran-viridislite (0.4.2-2) ... 218s Selecting previously unselected package r-cran-scales. 218s Preparing to unpack .../124-r-cran-scales_1.3.0-1_all.deb ... 218s Unpacking r-cran-scales (1.3.0-1) ... 218s Selecting previously unselected package r-cran-fansi. 218s Preparing to unpack .../125-r-cran-fansi_1.0.5-1_amd64.deb ... 218s Unpacking r-cran-fansi (1.0.5-1) ... 218s Selecting previously unselected package r-cran-utf8. 218s Preparing to unpack .../126-r-cran-utf8_1.2.4-1_amd64.deb ... 218s Unpacking r-cran-utf8 (1.2.4-1) ... 218s Selecting previously unselected package r-cran-pillar. 218s Preparing to unpack .../127-r-cran-pillar_1.10.1+dfsg-1_all.deb ... 218s Unpacking r-cran-pillar (1.10.1+dfsg-1) ... 219s Selecting previously unselected package r-cran-tibble. 219s Preparing to unpack .../128-r-cran-tibble_3.2.1+dfsg-3_amd64.deb ... 219s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 219s Selecting previously unselected package r-cran-ggplot2. 219s Preparing to unpack .../129-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 219s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 219s Selecting previously unselected package r-cran-segmented. 219s Preparing to unpack .../130-r-cran-segmented_2.1-4-1_all.deb ... 219s Unpacking r-cran-segmented (2.1-4-1) ... 219s Selecting previously unselected package r-cran-seqinr. 219s Preparing to unpack .../131-r-cran-seqinr_4.2-36-1_amd64.deb ... 219s Unpacking r-cran-seqinr (4.2-36-1) ... 219s Selecting previously unselected package r-cran-boot. 219s Preparing to unpack .../132-r-cran-boot_1.3-31-1_all.deb ... 219s Unpacking r-cran-boot (1.3-31-1) ... 219s Selecting previously unselected package r-cran-plyr. 219s Preparing to unpack .../133-r-cran-plyr_1.8.9-1_amd64.deb ... 219s Unpacking r-cran-plyr (1.8.9-1) ... 219s Selecting previously unselected package r-cran-stringi. 219s Preparing to unpack .../134-r-cran-stringi_1.8.4-1build1_amd64.deb ... 219s Unpacking r-cran-stringi (1.8.4-1build1) ... 219s Selecting previously unselected package r-cran-stringr. 219s Preparing to unpack .../135-r-cran-stringr_1.5.1-1_all.deb ... 219s Unpacking r-cran-stringr (1.5.1-1) ... 219s Selecting previously unselected package r-cran-reshape2. 219s Preparing to unpack .../136-r-cran-reshape2_1.4.4-2build1_amd64.deb ... 219s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 219s Selecting previously unselected package r-cran-generics. 219s Preparing to unpack .../137-r-cran-generics_0.1.3-1_all.deb ... 219s Unpacking r-cran-generics (0.1.3-1) ... 219s Selecting previously unselected package r-cran-tidyselect. 219s Preparing to unpack .../138-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ... 219s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 219s Selecting previously unselected package r-cran-dplyr. 219s Preparing to unpack .../139-r-cran-dplyr_1.1.4-4_amd64.deb ... 219s Unpacking r-cran-dplyr (1.1.4-4) ... 219s Selecting previously unselected package r-cran-permute. 219s Preparing to unpack .../140-r-cran-permute_0.9-7-1_all.deb ... 219s Unpacking r-cran-permute (0.9-7-1) ... 219s Selecting previously unselected package r-cran-cluster. 219s Preparing to unpack .../141-r-cran-cluster_2.1.8.1-1_amd64.deb ... 219s Unpacking r-cran-cluster (2.1.8.1-1) ... 219s Selecting previously unselected package r-cran-vegan. 219s Preparing to unpack .../142-r-cran-vegan_2.6-10+dfsg-1ubuntu2_amd64.deb ... 219s Unpacking r-cran-vegan (2.6-10+dfsg-1ubuntu2) ... 219s Selecting previously unselected package r-cran-adegenet. 219s Preparing to unpack .../143-r-cran-adegenet_2.1.11-1_amd64.deb ... 219s Unpacking r-cran-adegenet (2.1.11-1) ... 219s Selecting previously unselected package r-cran-hms. 219s Preparing to unpack .../144-r-cran-hms_1.1.3-1_all.deb ... 219s Unpacking r-cran-hms (1.1.3-1) ... 219s Selecting previously unselected package r-cran-prettyunits. 219s Preparing to unpack .../145-r-cran-prettyunits_1.2.0-1_all.deb ... 219s Unpacking r-cran-prettyunits (1.2.0-1) ... 220s Selecting previously unselected package r-cran-progress. 220s Preparing to unpack .../146-r-cran-progress_1.2.3-1_all.deb ... 220s Unpacking r-cran-progress (1.2.3-1) ... 220s Selecting previously unselected package r-cran-rncl. 220s Preparing to unpack .../147-r-cran-rncl_0.8.7-1_amd64.deb ... 220s Unpacking r-cran-rncl (0.8.7-1) ... 220s Selecting previously unselected package r-cran-xml. 220s Preparing to unpack .../148-r-cran-xml_3.99-0.18-1_amd64.deb ... 220s Unpacking r-cran-xml (3.99-0.18-1) ... 220s Selecting previously unselected package r-cran-curl. 220s Preparing to unpack .../149-r-cran-curl_6.2.1+dfsg-1ubuntu1_amd64.deb ... 220s Unpacking r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 220s Selecting previously unselected package r-cran-sys. 220s Preparing to unpack .../150-r-cran-sys_3.4.3-1_amd64.deb ... 220s Unpacking r-cran-sys (3.4.3-1) ... 220s Selecting previously unselected package r-cran-askpass. 220s Preparing to unpack .../151-r-cran-askpass_1.2.1-1_amd64.deb ... 220s Unpacking r-cran-askpass (1.2.1-1) ... 220s Selecting previously unselected package r-cran-openssl. 220s Preparing to unpack .../152-r-cran-openssl_2.3.2+dfsg-1_amd64.deb ... 220s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 220s Selecting previously unselected package r-cran-httr. 220s Preparing to unpack .../153-r-cran-httr_1.4.7+dfsg-1_all.deb ... 220s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 220s Selecting previously unselected package r-cran-uuid. 220s Preparing to unpack .../154-r-cran-uuid_1.2-1-1_amd64.deb ... 220s Unpacking r-cran-uuid (1.2-1-1) ... 220s Selecting previously unselected package r-cran-purrr. 220s Preparing to unpack .../155-r-cran-purrr_1.0.4-1_amd64.deb ... 220s Unpacking r-cran-purrr (1.0.4-1) ... 220s Selecting previously unselected package r-cran-tidyr. 220s Preparing to unpack .../156-r-cran-tidyr_1.3.1-1_amd64.deb ... 220s Unpacking r-cran-tidyr (1.3.1-1) ... 220s Selecting previously unselected package r-cran-xml2. 220s Preparing to unpack .../157-r-cran-xml2_1.3.7-1_amd64.deb ... 220s Unpacking r-cran-xml2 (1.3.7-1) ... 220s Selecting previously unselected package r-cran-rnexml. 220s Preparing to unpack .../158-r-cran-rnexml_2.4.11+ds-1_all.deb ... 220s Unpacking r-cran-rnexml (2.4.11+ds-1) ... 220s Selecting previously unselected package r-cran-phylobase. 220s Preparing to unpack .../159-r-cran-phylobase_0.8.12-1_amd64.deb ... 220s Unpacking r-cran-phylobase (0.8.12-1) ... 220s Selecting previously unselected package r-cran-adephylo. 220s Preparing to unpack .../160-r-cran-adephylo_1.1-16-1_amd64.deb ... 220s Unpacking r-cran-adephylo (1.1-16-1) ... 220s Selecting previously unselected package r-cran-brio. 220s Preparing to unpack .../161-r-cran-brio_1.1.5-1_amd64.deb ... 220s Unpacking r-cran-brio (1.1.5-1) ... 220s Selecting previously unselected package r-cran-ps. 220s Preparing to unpack .../162-r-cran-ps_1.9.0-1_amd64.deb ... 220s Unpacking r-cran-ps (1.9.0-1) ... 220s Selecting previously unselected package r-cran-processx. 220s Preparing to unpack .../163-r-cran-processx_3.8.6-1_amd64.deb ... 220s Unpacking r-cran-processx (3.8.6-1) ... 220s Selecting previously unselected package r-cran-callr. 220s Preparing to unpack .../164-r-cran-callr_3.7.6-1_all.deb ... 220s Unpacking r-cran-callr (3.7.6-1) ... 220s Selecting previously unselected package r-cran-desc. 220s Preparing to unpack .../165-r-cran-desc_1.4.3-1_all.deb ... 220s Unpacking r-cran-desc (1.4.3-1) ... 221s Selecting previously unselected package r-cran-diffobj. 221s Preparing to unpack .../166-r-cran-diffobj_0.3.5-1_amd64.deb ... 221s Unpacking r-cran-diffobj (0.3.5-1) ... 221s Selecting previously unselected package r-cran-evaluate. 221s 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227s 227s Type 'demo()' for some demos, 'help()' for on-line help, or 227s 'help.start()' for an HTML browser interface to help. 227s Type 'q()' to quit R. 227s 227s > Stangle("adephylo.Rnw") 227s Writing to file adephylo.R 227s > source("adephylo.R", echo=TRUE) 227s 227s > library(ape) 228s 228s > library(phylobase) 229s 229s Attaching package: ‘phylobase’ 229s 229s The following object is masked from ‘package:ape’: 229s 229s edges 229s 229s 229s > library(ade4) 229s 229s > library(adephylo) 230s 230s > search() 230s [1] ".GlobalEnv" "package:adephylo" "package:ade4" 230s [4] "package:phylobase" "package:ape" "package:stats" 230s [7] "package:graphics" "package:grDevices" "package:utils" 230s [10] "package:datasets" "package:methods" "Autoloads" 230s [13] "package:base" 230s 230s > data(ungulates) 230s 230s > ungulates$tre 230s [1] "((Antilocapra_americana,((Gorgon_taurinus,Oryx_leucoryx)W1,(Taurotragus_livingstoni,Tautragus_oryx)W2,(Gazella_thompsoni,(Saiga_tatarica,(Ovis_canadensis,Ovis_aries)W3)W6)W7)W10)W11,((Rangifer_tarandus,Alces_alces,Capreolus_capreolus,(Odocoileus_virginianus,Odocoileus_hemionus)W4)W8,(Dama_dama,Axis_axis,(Cervus_canadensis,Cervus_scoticus)W5)W9)W12)Root;" 230s 230s > myTree <- read.tree(text = ungulates$tre) 230s 230s > myTree 230s 230s Phylogenetic tree with 18 tips and 13 internal nodes. 230s 230s Tip labels: 230s Antilocapra_americana, Gorgon_taurinus, Oryx_leucoryx, Taurotragus_livingstoni, Tautragus_oryx, Gazella_thompsoni, ... 230s Node labels: 230s Root, W11, W10, W1, W2, W7, ... 230s 230s Rooted; no branch length. 230s 230s > plot(myTree, main = "ape's plotting of a tree") 230s 230s > temp <- as(myTree, "phylo4") 230s 230s > class(temp) 230s [1] "phylo4" 230s attr(,"package") 230s [1] "phylobase" 230s 230s > temp <- as(temp, "phylo") 230s 230s > class(temp) 230s [1] "phylo" 230s 230s > all.equal(temp, myTree) 230s [1] TRUE 231s 231s > ung <- phylo4d(myTree, ungulates$tab) 231s 231s > class(ung) 231s [1] "phylo4d" 231s attr(,"package") 231s [1] "phylobase" 231s 231s > table.phylo4d(ung) 231s 231s > x <- tdata(ung, type = "tip") 231s 231s > head(x) 231s afbw mnw fnw ls 231s Antilocapra_americana 50586 3832 3908 1.8 231s Gorgon_taurinus 165000 18600 14500 1.0 231s Oryx_leucoryx 87700 6840 6490 1.0 231s Taurotragus_livingstoni 405000 36300 28500 1.0 231s Tautragus_oryx 316000 26800 24700 1.0 231s Gazella_thompsoni 21300 2500 2500 1.0 231s 231s > W <- proxTips(myTree, met = "Abouheif") 231s 231s > moran.idx(tdata(ung, type = "tip")$afbw, W) 231s [1] 0.1132682 231s 231s > moran.idx(tdata(ung, type = "tip")[, 1], W, addInfo = TRUE) 231s [1] 0.1132682 231s attr(,"I0") 231s [1] -0.05882353 231s attr(,"Imin") 231s [1] -0.5217391 231s attr(,"Imax") 231s [1] 1.000699 231s 231s > afbw <- tdata(ung, type = "tip")$afbw 231s 231s > sim <- replicate(499, moran.idx(sample(afbw), W)) 231s 231s > sim <- c(moran.idx(afbw, W), sim) 231s 231s > cat("\n=== p-value (right-tail) === \n") 231s 231s === p-value (right-tail) === 231s 231s > pval <- mean(sim >= sim[1]) 231s 231s > pval 231s [1] 0.126 231s 231s > plot(density(sim), main = "Moran's I Monte Carlo test for 'bif'") 231s 231s > mtext("Density of permutations, and observation (in red)") 231s 231s > abline(v = sim[1], col = "red", lwd = 3) 231s 231s > ung.abTests <- abouheif.moran(ung) 231s 231s > ung.abTests 231s class: krandtest lightkrandtest 231s Monte-Carlo tests 231s Call: as.krandtest(sim = matrix(res$result, ncol = nvar, byrow = TRUE), 231s obs = res$obs, alter = alter, names = test.names) 231s 231s Number of tests: 4 231s 231s Adjustment method for multiple comparisons: none 231s Permutation number: 999 231s Test Obs Std.Obs Alter Pvalue 231s 1 afbw 0.1653920 1.206006 greater 0.126 231s 2 mnw 0.3681410 2.721455 greater 0.010 231s 3 fnw 0.3843272 2.779996 greater 0.013 231s 4 ls 0.3002425 2.027535 greater 0.042 231s 231s 231s > plot(ung.abTests) 231s 231s > hasEdgeLength(ung) 231s [1] FALSE 231s 231s > myTree.withBrLe <- compute.brlen(myTree) 231s 231s > myProx <- vcv.phylo(myTree.withBrLe) 231s 231s > abouheif.moran(ung, W = myProx) 231s class: krandtest lightkrandtest 231s Monte-Carlo tests 231s Call: as.krandtest(sim = matrix(res$result, ncol = nvar, byrow = TRUE), 231s obs = res$obs, alter = alter, names = test.names) 231s 231s Number of tests: 4 231s 231s Adjustment method for multiple comparisons: none 231s Permutation number: 999 231s Test Obs Std.Obs Alter Pvalue 231s 1 afbw 0.09113999 -0.2959043 greater 0.483 231s 2 mnw 0.17453316 0.9016256 greater 0.178 231s 3 fnw 0.16952884 0.8091364 greater 0.194 231s 4 ls 0.15842344 0.6215658 greater 0.161 231s 231s 231s > x <- as(rtree(5), "phylo4") 231s 231s > plot(x, show.n = TRUE) 231s 231s > x.part <- treePart(x) 231s 231s > x.part 231s X7 X8 X9 231s t3 0 0 0 231s t1 1 1 1 231s t4 1 1 1 231s t2 1 1 0 231s t5 1 0 0 231s 231s > temp <- phylo4d(x, x.part) 231s 231s > table.phylo4d(temp, cent = FALSE, scale = FALSE) 231s 231s > args(treePart) 231s function (x, result = c("dummy", "orthobasis")) 231s NULL 231s 231s > temp <- phylo4d(x, treePart(x, result = "orthobasis")) 231s 231s > temp <- phylo4d(myTree, treePart(myTree, result = "orthobasis")) 231s 231s > par(mar = rep(0.1, 4)) 231s 231s > table.phylo4d(temp, repVar = 1:8, ratio.tree = 0.3) 231s 231s > afbw.ortgTest <- orthogram(afbw, myTree) 231s 231s > afbw.ortgTest 231s class: krandtest lightkrandtest 231s Monte-Carlo tests 231s Call: orthogram(x = afbw, tre = myTree) 231s 231s Number of tests: 4 231s 231s Adjustment method for multiple comparisons: none 231s Permutation number: 999 231s Test Obs Std.Obs Alter Pvalue 231s 1 R2Max 0.3298815 0.8675667 greater 0.182 231s 2 SkR2k 8.2600870 -0.5055272 greater 0.708 231s 3 Dmax 0.2066299 0.3289174 greater 0.349 231s 4 SCE 0.1797097 -0.5927859 greater 0.674 231s 231s 231s > me.phylo(myTree.withBrLe) 231s Orthobasis with 18 rows and 17 columns 231s Only 6 rows and 4 columns are shown 231s ME 1 ME 2 ME 3 ME 4 231s Antilocapra_americana -0.4437356 0.0007632929 -0.1441052 7.598387e-16 231s Gorgon_taurinus -0.9373732 0.0123304634 -1.5429045 2.121320e+00 231s Oryx_leucoryx -0.9373732 0.0123304634 -1.5429045 2.121320e+00 231s Taurotragus_livingstoni -0.9373732 0.0123304634 -1.5429045 -2.121320e+00 231s Tautragus_oryx -0.9373732 0.0123304634 -1.5429045 -2.121320e+00 231s Gazella_thompsoni -0.8932566 -0.0455675921 0.7757824 -1.648597e-15 231s 231s > ung.listBas <- list() 231s 231s > ung.listBas[[1]] <- phylo4d(myTree, as.data.frame(me.phylo(myTree.withBrLe, 231s + method = "patristic"))) 231s 231s > ung.listBas[[2]] <- phylo4d(myTree, as.data.frame(me.phylo(myTree, 231s + method = "nNodes"))) 231s 231s > ung.listBas[[3]] <- phylo4d(myTree, as.data.frame(me.phylo(myTree, 231s + method = "Abouheif"))) 231s 231s > ung.listBas[[4]] <- phylo4d(myTree, as.data.frame(me.phylo(myTree, 231s + method = "sumDD"))) 231s 231s > par(mar = rep(0.1, 4), mfrow = c(2, 2)) 231s 231s > invisible(lapply(ung.listBas, table.phylo4d, repVar = 1:5, 231s + cex.sym = 0.7, show.tip.label = FALSE, show.node = FALSE)) 231s 231s > afbw <- log(ungulates$tab[, 1]) 231s 231s > neonatw <- log((ungulates$tab[, 2] + ungulates$tab[, 231s + 3])/2) 231s 231s > names(afbw) <- myTree$tip.label 231s 231s > names(neonatw) <- myTree$tip.label 231s 231s > plot(afbw, neonatw, main = "Relationship between afbw and neonatw") 231s 231s > lm1 <- lm(neonatw ~ afbw) 231s 231s > abline(lm1, col = "blue") 231s 231s > anova(lm1) 231s Analysis of Variance Table 231s 231s Response: neonatw 231s Df Sum Sq Mean Sq F value Pr(>F) 231s afbw 1 12.1625 12.1625 159.43 9.81e-10 *** 231s Residuals 16 1.2206 0.0763 231s --- 231s Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1 231s 231s > resid <- residuals(lm1) 231s 231s > names(resid) <- myTree$tip.label 231s 231s > temp <- phylo4d(myTree, data.frame(resid)) 231s 231s > abouheif.moran(temp) 231s class: krandtest lightkrandtest 231s Monte-Carlo tests 231s Call: as.krandtest(sim = matrix(res$result, ncol = nvar, byrow = TRUE), 231s obs = res$obs, alter = alter, names = test.names) 231s 231s Number of tests: 1 231s 231s Adjustment method for multiple comparisons: none 231s Permutation number: 999 231s Test Obs Std.Obs Alter Pvalue 231s 1 resid 0.4566173 3.204757 greater 0.003 231s 231s 231s > table.phylo4d(temp) 231s 231s > myBasis <- me.phylo(myTree, method = "Abouheif") 231s 231s > lm2 <- lm(neonatw ~ myBasis[, 1] + afbw) 231s 231s > resid <- residuals(lm2) 231s 231s > names(resid) <- myTree$tip.label 231s 231s > temp <- phylo4d(myTree, data.frame(resid)) 231s 231s > abouheif.moran(temp) 231s class: krandtest lightkrandtest 231s Monte-Carlo tests 231s Call: as.krandtest(sim = matrix(res$result, ncol = nvar, byrow = TRUE), 231s obs = res$obs, alter = alter, names = test.names) 231s 231s Number of tests: 1 231s 231s Adjustment method for multiple comparisons: none 231s Permutation number: 999 231s Test Obs Std.Obs Alter Pvalue 231s 1 resid 0.1805854 1.21455 greater 0.133 231s 231s 231s > anova(lm2) 231s Analysis of Variance Table 231s 231s Response: neonatw 231s Df Sum Sq Mean Sq F value Pr(>F) 231s myBasis[, 1] 1 0.1630 0.1630 3.1444 0.09649 . 231s afbw 1 12.4427 12.4427 240.0840 1.227e-10 *** 231s Residuals 15 0.7774 0.0518 231s --- 231s Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1 231s 231s > W <- proxTips(myTree, method = "Abouheif", sym = FALSE) 231s 231s > lagNeonatw <- W %*% neonatw 231s 231s > lm3 <- lm(neonatw ~ lagNeonatw + afbw) 231s 231s > resid <- residuals(lm3) 231s 231s > abouheif.moran(resid, W) 231s class: krandtest lightkrandtest 231s Monte-Carlo tests 231s Call: as.krandtest(sim = matrix(res$result, ncol = nvar, byrow = TRUE), 231s obs = res$obs, alter = alter, names = test.names) 231s 231s Number of tests: 1 231s 231s Adjustment method for multiple comparisons: none 231s Permutation number: 999 231s Test Obs Std.Obs Alter Pvalue 231s 1 x 0.1658522 1.565321 greater 0.067 231s 231s 231s > f1 <- function(x) { 231s + m <- mean(x, na.rm = TRUE) 231s + x[is.na(x)] <- m 231s + return(x) 231s + } 231s 231s > data(maples) 231s 231s > traits <- apply(maples$tab, 2, f1) 231s 231s > pca1 <- dudi.pca(traits, scannf = FALSE, nf = 1) 231s 231s > barplot(pca1$eig, main = "PCA eigenvalues", col = heat.colors(16)) 231s 231s > tre <- read.tree(text = maples$tre) 231s 231s > W <- proxTips(tre) 231s 231s > myComp <- data.frame(PC1 = pca1$li[, 1], lagPC1 = W %*% 231s + pca1$li[, 1]) 231s 231s > myComp.4d <- phylo4d(tre, myComp) 231s 231s > nodeLabels(myComp.4d) <- names(nodeLabels(myComp.4d)) 231s 231s > table.phylo4d(myComp.4d) 231s 231s > myTest <- abouheif.moran(myComp[, 1], W = W) 231s 231s > plot(myTest, main = "Abouheif's test using patristic proximity") 231s 231s > mtext("First principal component - maples data", col = "blue", 231s + line = 1) 231s 231s > ldgs <- pca1$c1[, 1] 231s 231s > plot(ldgs, type = "h", xlab = "Variable", xaxt = "n", 231s + ylab = "Loadings") 231s 231s > s.label(cbind(1:31, ldgs), lab = colnames(traits), 231s + add.p = TRUE, clab = 0.8) 231s 231s > temp <- abs(ldgs) 231s 231s > thres <- quantile(temp, 0.75) 231s 231s > abline(h = thres * c(-1, 1), lty = 2, col = "blue3", 231s + lwd = 3) 231s 231s > title("Loadings for PC1") 231s 231s > mtext("Quarter of most contributing variables indicated in blue", 231s + col = "blue") 231s > 231s adephylo.Rnw passed 231s autopkgtest [22:05:49]: test run-unit-test: -----------------------] 232s autopkgtest [22:05:50]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 232s run-unit-test PASS 232s autopkgtest [22:05:50]: test pkg-r-autopkgtest: preparing testbed 283s autopkgtest [22:06:41]: testbed dpkg architecture: amd64 283s autopkgtest [22:06:41]: testbed apt version: 2.9.31ubuntu1 284s autopkgtest [22:06:42]: @@@@@@@@@@@@@@@@@@@@ test bed setup 284s autopkgtest [22:06:42]: testbed release detected to be: plucky 285s autopkgtest [22:06:43]: updating testbed package index (apt update) 285s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 285s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 285s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 285s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 285s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [369 kB] 285s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [44.1 kB] 285s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [14.5 kB] 285s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [85.7 kB] 285s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [67.4 kB] 286s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 c-n-f Metadata [1852 B] 286s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 c-n-f Metadata [116 B] 286s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [174 kB] 286s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [342 kB] 286s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 c-n-f Metadata [15.3 kB] 286s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [16.1 kB] 286s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [8544 B] 286s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 c-n-f Metadata [628 B] 286s Fetched 1265 kB in 1s (1499 kB/s) 287s Reading package lists... 287s Reading package lists... 288s Building dependency tree... 288s Reading state information... 288s Calculating upgrade... 288s Calculating upgrade... 288s The following package was automatically installed and is no longer required: 288s libnl-genl-3-200 288s Use 'sudo apt autoremove' to remove it. 288s The following NEW packages will be installed: 288s bpftool libdebuginfod-common libdebuginfod1t64 linux-headers-6.14.0-10 288s linux-headers-6.14.0-10-generic linux-image-6.14.0-10-generic 288s linux-modules-6.14.0-10-generic linux-modules-extra-6.14.0-10-generic 288s linux-perf linux-tools-6.14.0-10 linux-tools-6.14.0-10-generic pnp.ids 288s The following packages will be upgraded: 288s apparmor apt apt-utils binutils binutils-common binutils-x86-64-linux-gnu 288s cloud-init cloud-init-base curl dosfstools exfatprogs fwupd gcc-15-base 288s gir1.2-girepository-2.0 gir1.2-glib-2.0 htop hwdata initramfs-tools 288s initramfs-tools-bin initramfs-tools-core libapparmor1 libapt-pkg7.0 288s libassuan9 libatomic1 libaudit-common libaudit1 libbinutils libbrotli1 288s libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libctf-nobfd0 libctf0 288s libcurl3t64-gnutls libcurl4t64 libestr0 libftdi1-2 libfwupd3 libgcc-s1 288s libgirepository-1.0-1 libglib2.0-0t64 libglib2.0-data libgpgme11t64 288s libgprofng0 libjemalloc2 liblz4-1 liblzma5 libmm-glib0 libncurses6 288s libncursesw6 libnewt0.52 libnl-3-200 libnl-genl-3-200 libnl-route-3-200 288s libnss-systemd libpam-systemd libparted2t64 libpci3 libpython3-stdlib 288s libpython3.13 libpython3.13-minimal libpython3.13-stdlib libseccomp2 288s libselinux1 libsemanage-common libsemanage2 libsframe1 libsqlite3-0 288s libstdc++6 libsystemd-shared libsystemd0 libtinfo6 libudev1 libxml2 288s linux-firmware linux-generic linux-headers-generic linux-headers-virtual 288s linux-image-generic linux-image-virtual linux-libc-dev linux-tools-common 288s linux-virtual locales media-types ncurses-base ncurses-bin ncurses-term 288s parted pci.ids pciutils pinentry-curses python-apt-common python3 288s python3-apt python3-bcrypt python3-cffi-backend python3-dbus python3-gi 288s python3-jinja2 python3-lazr.uri python3-markupsafe python3-minimal 288s python3-newt python3-rpds-py python3-systemd python3-yaml python3.13 288s python3.13-gdbm python3.13-minimal rsync rsyslog strace systemd 288s systemd-cryptsetup systemd-resolved systemd-sysv systemd-timesyncd 288s ubuntu-kernel-accessories ubuntu-minimal ubuntu-standard udev whiptail 288s xz-utils 289s 126 upgraded, 12 newly installed, 0 to remove and 0 not upgraded. 289s Need to get 829 MB of archives. 289s After this operation, 325 MB of additional disk space will be used. 289s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-bin amd64 6.5+20250216-2 [194 kB] 289s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-dev-bin amd64 2.41-1ubuntu1 [24.7 kB] 289s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6-dev amd64 2.41-1ubuntu1 [2182 kB] 289s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 locales all 2.41-1ubuntu1 [4246 kB] 289s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6 amd64 2.41-1ubuntu1 [3327 kB] 289s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-bin amd64 2.41-1ubuntu1 [701 kB] 289s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-libc-dev amd64 6.14.0-10.10 [1723 kB] 289s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libatomic1 amd64 15-20250222-0ubuntu1 [10.4 kB] 289s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-15-base amd64 15-20250222-0ubuntu1 [53.4 kB] 289s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-s1 amd64 15-20250222-0ubuntu1 [77.8 kB] 289s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++6 amd64 15-20250222-0ubuntu1 [798 kB] 289s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-base all 6.5+20250216-2 [25.9 kB] 289s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-term all 6.5+20250216-2 [276 kB] 289s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 liblz4-1 amd64 1.10.0-4 [66.4 kB] 289s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma5 amd64 5.6.4-1 [157 kB] 289s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd0 amd64 257.3-1ubuntu3 [595 kB] 290s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libnss-systemd amd64 257.3-1ubuntu3 [199 kB] 290s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-sysv amd64 257.3-1ubuntu3 [11.9 kB] 290s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-resolved amd64 257.3-1ubuntu3 [345 kB] 290s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-systemd amd64 257.3-1ubuntu3 [302 kB] 290s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd-shared amd64 257.3-1ubuntu3 [2371 kB] 290s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd amd64 257.3-1ubuntu3 [3052 kB] 290s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-timesyncd amd64 257.3-1ubuntu3 [42.1 kB] 290s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-cryptsetup amd64 257.3-1ubuntu3 [124 kB] 290s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 udev amd64 257.3-1ubuntu3 [1404 kB] 290s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libudev1 amd64 257.3-1ubuntu3 [215 kB] 290s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit-common all 1:4.0.2-2ubuntu2 [6628 B] 290s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libcap-ng0 amd64 0.8.5-4build1 [15.6 kB] 290s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit1 amd64 1:4.0.2-2ubuntu2 [54.0 kB] 290s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libseccomp2 amd64 2.5.5-1ubuntu6 [53.5 kB] 290s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libselinux1 amd64 3.7-3ubuntu3 [87.3 kB] 290s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libapparmor1 amd64 4.1.0~beta5-0ubuntu8 [55.0 kB] 290s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libapt-pkg7.0 amd64 2.9.33 [1138 kB] 290s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 apt amd64 2.9.33 [1439 kB] 290s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 apt-utils amd64 2.9.33 [222 kB] 290s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-minimal amd64 3.13.2-2 [27.7 kB] 290s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 python3 amd64 3.13.2-2 [24.0 kB] 290s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13 amd64 3.13.2-2 [2341 kB] 290s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 media-types all 13.0.0 [29.9 kB] 290s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses6 amd64 6.5+20250216-2 [126 kB] 290s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libncursesw6 amd64 6.5+20250216-2 [165 kB] 290s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libtinfo6 amd64 6.5+20250216-2 [119 kB] 290s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libsqlite3-0 amd64 3.46.1-2 [715 kB] 290s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.2-2 [735 kB] 290s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.2-2 [2365 kB] 290s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.2-2 [883 kB] 290s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.2-2 [2066 kB] 290s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.4 kB] 290s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 rsync amd64 3.4.1+ds1-3 [482 kB] 290s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod-common all 0.192-4 [15.4 kB] 290s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage-common all 3.7-2.1build1 [7268 B] 290s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage2 amd64 3.7-2.1build1 [106 kB] 291s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libassuan9 amd64 3.0.2-2 [43.1 kB] 291s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-girepository-2.0 amd64 1.83.4-1 [25.3 kB] 291s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-glib-2.0 amd64 2.84.0-1 [184 kB] 291s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-0t64 amd64 2.84.0-1 [1669 kB] 291s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libgirepository-1.0-1 amd64 1.83.4-1 [89.5 kB] 291s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libestr0 amd64 0.1.11-2 [8340 B] 291s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-data all 2.84.0-1 [53.0 kB] 291s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-newt amd64 0.52.24-4ubuntu2 [21.1 kB] 291s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libnewt0.52 amd64 0.52.24-4ubuntu2 [55.7 kB] 291s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2ubuntu5 [772 kB] 291s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 python-apt-common all 2.9.9build1 [21.3 kB] 291s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-apt amd64 2.9.9build1 [172 kB] 291s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-cffi-backend amd64 1.17.1-2build2 [96.6 kB] 291s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dbus amd64 1.3.2-5build5 [102 kB] 291s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-4build1 [252 kB] 291s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-yaml amd64 6.0.2-1build2 [144 kB] 291s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 rsyslog amd64 8.2412.0-2ubuntu2 [555 kB] 291s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 whiptail amd64 0.52.24-4ubuntu2 [19.1 kB] 291s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-minimal amd64 1.549 [11.5 kB] 291s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 apparmor amd64 4.1.0~beta5-0ubuntu8 [701 kB] 291s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 dosfstools amd64 4.2-1.2 [95.0 kB] 291s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-genl-3-200 amd64 3.7.0-1 [12.2 kB] 291s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-route-3-200 amd64 3.7.0-1 [191 kB] 291s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-3-200 amd64 3.7.0-1 [64.9 kB] 291s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 parted amd64 3.6-5 [53.9 kB] 291s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libparted2t64 amd64 3.6-5 [158 kB] 291s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 pci.ids all 0.0~2025.03.09-1 [285 kB] 291s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 pciutils amd64 1:3.13.0-2 [110 kB] 291s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 libpci3 amd64 1:3.13.0-2 [39.8 kB] 291s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 strace amd64 6.13+ds-1ubuntu1 [622 kB] 291s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 xz-utils amd64 5.6.4-1 [278 kB] 291s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-standard amd64 1.549 [11.5 kB] 291s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libgprofng0 amd64 2.44-3ubuntu1 [886 kB] 291s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf0 amd64 2.44-3ubuntu1 [96.5 kB] 291s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf-nobfd0 amd64 2.44-3ubuntu1 [98.9 kB] 291s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-x86-64-linux-gnu amd64 2.44-3ubuntu1 [1108 kB] 291s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libbinutils amd64 2.44-3ubuntu1 [585 kB] 291s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils amd64 2.44-3ubuntu1 [208 kB] 291s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-common amd64 2.44-3ubuntu1 [215 kB] 291s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libsframe1 amd64 2.44-3ubuntu1 [14.8 kB] 291s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 hwdata all 0.393-3 [1562 B] 291s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 pnp.ids all 0.393-3 [29.5 kB] 291s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-common all 6.14.0-10.10 [295 kB] 291s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 bpftool amd64 7.6.0+6.14.0-10.10 [1147 kB] 291s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-markupsafe amd64 2.1.5-1build4 [13.4 kB] 291s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 291s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init-base all 25.1-0ubuntu3 [616 kB] 291s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libbrotli1 amd64 1.1.0-2build4 [365 kB] 291s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 curl amd64 8.12.1-3ubuntu1 [258 kB] 291s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4t64 amd64 8.12.1-3ubuntu1 [437 kB] 292s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 exfatprogs amd64 1.2.8-1 [76.3 kB] 292s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl3t64-gnutls amd64 8.12.1-3ubuntu1 [432 kB] 292s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 fwupd amd64 2.0.6-4 [5408 kB] 292s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libfwupd3 amd64 2.0.6-4 [136 kB] 292s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libmm-glib0 amd64 1.23.4-0ubuntu3 [251 kB] 292s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 htop amd64 3.4.0-2 [195 kB] 292s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-firmware amd64 20250310.git9e1370d3-0ubuntu1 [571 MB] 316s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools all 0.146ubuntu1 [7920 B] 316s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-core all 0.146ubuntu1 [51.9 kB] 316s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-bin amd64 0.146ubuntu1 [26.2 kB] 316s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod1t64 amd64 0.192-4 [21.0 kB] 316s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 libftdi1-2 amd64 1.5-8build1 [30.2 kB] 316s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libgpgme11t64 amd64 1.24.2-1ubuntu2 [155 kB] 316s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libjemalloc2 amd64 5.3.0-3 [277 kB] 316s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-6.14.0-10-generic amd64 6.14.0-10.10 [41.2 MB] 318s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-6.14.0-10-generic amd64 6.14.0-10.10 [15.3 MB] 318s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-extra-6.14.0-10-generic amd64 6.14.0-10.10 [120 MB] 323s Get:120 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-generic amd64 6.14.0-10.10 [1730 B] 323s Get:121 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-generic amd64 6.14.0-10.10 [11.1 kB] 323s Get:122 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-virtual amd64 6.14.0-10.10 [1722 B] 323s Get:123 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-virtual amd64 6.14.0-10.10 [11.1 kB] 323s Get:124 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-virtual amd64 6.14.0-10.10 [1642 B] 323s Get:125 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10 all 6.14.0-10.10 [14.2 MB] 323s Get:126 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10-generic amd64 6.14.0-10.10 [3915 kB] 323s Get:127 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-generic amd64 6.14.0-10.10 [11.0 kB] 323s Get:128 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-perf amd64 6.14.0-10.10 [4122 kB] 323s Get:129 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10 amd64 6.14.0-10.10 [1394 kB] 323s Get:130 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10-generic amd64 6.14.0-10.10 [830 B] 323s Get:131 http://ftpmaster.internal/ubuntu plucky/main amd64 pinentry-curses amd64 1.3.1-2ubuntu3 [42.3 kB] 323s Get:132 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lazr.uri all 1.0.6-6 [13.7 kB] 323s Get:133 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-rpds-py amd64 0.21.0-2ubuntu2 [278 kB] 323s Get:134 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-systemd amd64 235-1build6 [43.9 kB] 323s Get:135 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-gdbm amd64 3.13.2-2 [31.9 kB] 323s Get:136 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-kernel-accessories amd64 1.549 [11.2 kB] 323s Get:137 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init all 25.1-0ubuntu3 [2100 B] 323s Get:138 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-bcrypt amd64 4.2.0-2.1build1 [221 kB] 324s Preconfiguring packages ... 324s Fetched 829 MB in 35s (23.7 MB/s) 324s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109140 files and directories currently installed.) 324s Preparing to unpack .../ncurses-bin_6.5+20250216-2_amd64.deb ... 324s Unpacking ncurses-bin (6.5+20250216-2) over (6.5+20250216-1) ... 324s Setting up ncurses-bin (6.5+20250216-2) ... 324s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109140 files and directories currently installed.) 324s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu1_amd64.deb ... 324s Unpacking libc-dev-bin (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 324s Preparing to unpack .../libc6-dev_2.41-1ubuntu1_amd64.deb ... 324s Unpacking libc6-dev:amd64 (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 325s Preparing to unpack .../locales_2.41-1ubuntu1_all.deb ... 325s Unpacking locales (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 325s Preparing to unpack .../libc6_2.41-1ubuntu1_amd64.deb ... 325s Checking for services that may need to be restarted... 325s Checking init scripts... 325s Checking for services that may need to be restarted... 325s Checking init scripts... 325s Stopping some services possibly affected by the upgrade (will be restarted later): 325s cron: stopping...done. 325s 325s Unpacking libc6:amd64 (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 325s Setting up libc6:amd64 (2.41-1ubuntu1) ... 325s Checking for services that may need to be restarted... 325s Checking init scripts... 325s Restarting services possibly affected by the upgrade: 325s cron: restarting...done. 325s 325s Services restarted successfully. 325s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109141 files and directories currently installed.) 325s Preparing to unpack .../libc-bin_2.41-1ubuntu1_amd64.deb ... 325s Unpacking libc-bin (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 326s Setting up libc-bin (2.41-1ubuntu1) ... 326s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109141 files and directories currently installed.) 326s Preparing to unpack .../linux-libc-dev_6.14.0-10.10_amd64.deb ... 326s Unpacking linux-libc-dev:amd64 (6.14.0-10.10) over (6.12.0-16.16) ... 326s Preparing to unpack .../libatomic1_15-20250222-0ubuntu1_amd64.deb ... 326s Unpacking libatomic1:amd64 (15-20250222-0ubuntu1) over (15-20250213-1ubuntu1) ... 326s Preparing to unpack .../gcc-15-base_15-20250222-0ubuntu1_amd64.deb ... 326s Unpacking gcc-15-base:amd64 (15-20250222-0ubuntu1) over (15-20250213-1ubuntu1) ... 326s Setting up gcc-15-base:amd64 (15-20250222-0ubuntu1) ... 326s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 326s Preparing to unpack .../libgcc-s1_15-20250222-0ubuntu1_amd64.deb ... 326s Unpacking libgcc-s1:amd64 (15-20250222-0ubuntu1) over (15-20250213-1ubuntu1) ... 326s Setting up libgcc-s1:amd64 (15-20250222-0ubuntu1) ... 326s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 326s Preparing to unpack .../libstdc++6_15-20250222-0ubuntu1_amd64.deb ... 326s Unpacking libstdc++6:amd64 (15-20250222-0ubuntu1) over (15-20250213-1ubuntu1) ... 326s Setting up libstdc++6:amd64 (15-20250222-0ubuntu1) ... 326s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 326s Preparing to unpack .../ncurses-base_6.5+20250216-2_all.deb ... 326s Unpacking ncurses-base (6.5+20250216-2) over (6.5+20250216-1) ... 326s Setting up ncurses-base (6.5+20250216-2) ... 327s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 327s Preparing to unpack .../ncurses-term_6.5+20250216-2_all.deb ... 327s Unpacking ncurses-term (6.5+20250216-2) over (6.5+20250216-1) ... 327s Preparing to unpack .../liblz4-1_1.10.0-4_amd64.deb ... 327s Unpacking liblz4-1:amd64 (1.10.0-4) over (1.10.0-3) ... 327s Setting up liblz4-1:amd64 (1.10.0-4) ... 327s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 327s Preparing to unpack .../liblzma5_5.6.4-1_amd64.deb ... 327s Unpacking liblzma5:amd64 (5.6.4-1) over (5.6.3-1) ... 327s Setting up liblzma5:amd64 (5.6.4-1) ... 327s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 327s Preparing to unpack .../libsystemd0_257.3-1ubuntu3_amd64.deb ... 327s Unpacking libsystemd0:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 327s Setting up libsystemd0:amd64 (257.3-1ubuntu3) ... 327s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 327s Preparing to unpack .../libnss-systemd_257.3-1ubuntu3_amd64.deb ... 327s Unpacking libnss-systemd:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 327s Preparing to unpack .../systemd-sysv_257.3-1ubuntu3_amd64.deb ... 327s Unpacking systemd-sysv (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 327s Preparing to unpack .../systemd-resolved_257.3-1ubuntu3_amd64.deb ... 327s Unpacking systemd-resolved (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 327s Preparing to unpack .../libpam-systemd_257.3-1ubuntu3_amd64.deb ... 327s Unpacking libpam-systemd:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 327s Preparing to unpack .../libsystemd-shared_257.3-1ubuntu3_amd64.deb ... 327s Unpacking libsystemd-shared:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 328s Setting up libsystemd-shared:amd64 (257.3-1ubuntu3) ... 328s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 328s Preparing to unpack .../systemd_257.3-1ubuntu3_amd64.deb ... 328s Unpacking systemd (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 328s Preparing to unpack .../systemd-timesyncd_257.3-1ubuntu3_amd64.deb ... 328s Unpacking systemd-timesyncd (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 328s Preparing to unpack .../systemd-cryptsetup_257.3-1ubuntu3_amd64.deb ... 328s Unpacking systemd-cryptsetup (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 328s Preparing to unpack .../udev_257.3-1ubuntu3_amd64.deb ... 328s Unpacking udev (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 328s Preparing to unpack .../libudev1_257.3-1ubuntu3_amd64.deb ... 328s Unpacking libudev1:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 328s Setting up libudev1:amd64 (257.3-1ubuntu3) ... 328s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 328s Preparing to unpack .../libaudit-common_1%3a4.0.2-2ubuntu2_all.deb ... 328s Unpacking libaudit-common (1:4.0.2-2ubuntu2) over (1:4.0.2-2ubuntu1) ... 328s Setting up libaudit-common (1:4.0.2-2ubuntu2) ... 328s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 328s Preparing to unpack .../libcap-ng0_0.8.5-4build1_amd64.deb ... 328s Unpacking libcap-ng0:amd64 (0.8.5-4build1) over (0.8.5-4) ... 328s Setting up libcap-ng0:amd64 (0.8.5-4build1) ... 328s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 328s Preparing to unpack .../libaudit1_1%3a4.0.2-2ubuntu2_amd64.deb ... 328s Unpacking libaudit1:amd64 (1:4.0.2-2ubuntu2) over (1:4.0.2-2ubuntu1) ... 328s Setting up libaudit1:amd64 (1:4.0.2-2ubuntu2) ... 328s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 328s Preparing to unpack .../libseccomp2_2.5.5-1ubuntu6_amd64.deb ... 328s Unpacking libseccomp2:amd64 (2.5.5-1ubuntu6) over (2.5.5-1ubuntu5) ... 328s Setting up libseccomp2:amd64 (2.5.5-1ubuntu6) ... 329s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 329s Preparing to unpack .../libselinux1_3.7-3ubuntu3_amd64.deb ... 329s Unpacking libselinux1:amd64 (3.7-3ubuntu3) over (3.7-3ubuntu2) ... 329s Setting up libselinux1:amd64 (3.7-3ubuntu3) ... 329s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 329s Preparing to unpack .../libapparmor1_4.1.0~beta5-0ubuntu8_amd64.deb ... 329s Unpacking libapparmor1:amd64 (4.1.0~beta5-0ubuntu8) over (4.1.0~beta5-0ubuntu5) ... 329s Preparing to unpack .../libapt-pkg7.0_2.9.33_amd64.deb ... 329s Unpacking libapt-pkg7.0:amd64 (2.9.33) over (2.9.31ubuntu1) ... 329s Setting up libapt-pkg7.0:amd64 (2.9.33) ... 329s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 329s Preparing to unpack .../archives/apt_2.9.33_amd64.deb ... 329s Unpacking apt (2.9.33) over (2.9.31ubuntu1) ... 329s Setting up apt (2.9.33) ... 330s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 330s Preparing to unpack .../apt-utils_2.9.33_amd64.deb ... 330s Unpacking apt-utils (2.9.33) over (2.9.31ubuntu1) ... 330s Preparing to unpack .../python3-minimal_3.13.2-2_amd64.deb ... 330s Unpacking python3-minimal (3.13.2-2) over (3.13.2-1) ... 330s Setting up python3-minimal (3.13.2-2) ... 330s (Reading database ... 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.../73-linux-headers-generic_6.14.0-10.10_amd64.deb ... 344s Unpacking linux-headers-generic (6.14.0-10.10) over (6.12.0-16.16+2) ... 344s Selecting previously unselected package linux-perf. 344s Preparing to unpack .../74-linux-perf_6.14.0-10.10_amd64.deb ... 344s Unpacking linux-perf (6.14.0-10.10) ... 344s Selecting previously unselected package linux-tools-6.14.0-10. 344s Preparing to unpack .../75-linux-tools-6.14.0-10_6.14.0-10.10_amd64.deb ... 344s Unpacking linux-tools-6.14.0-10 (6.14.0-10.10) ... 345s Selecting previously unselected package linux-tools-6.14.0-10-generic. 345s Preparing to unpack .../76-linux-tools-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 345s Unpacking linux-tools-6.14.0-10-generic (6.14.0-10.10) ... 345s Preparing to unpack .../77-pinentry-curses_1.3.1-2ubuntu3_amd64.deb ... 345s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 345s Preparing to unpack .../78-python3-lazr.uri_1.0.6-6_all.deb ... 345s Unpacking python3-lazr.uri (1.0.6-6) over (1.0.6-5) ... 345s Preparing to unpack .../79-python3-rpds-py_0.21.0-2ubuntu2_amd64.deb ... 345s Unpacking python3-rpds-py (0.21.0-2ubuntu2) over (0.21.0-2ubuntu1) ... 345s Preparing to unpack .../80-python3-systemd_235-1build6_amd64.deb ... 345s Unpacking python3-systemd (235-1build6) over (235-1build5) ... 345s Preparing to unpack .../81-python3.13-gdbm_3.13.2-2_amd64.deb ... 345s Unpacking python3.13-gdbm (3.13.2-2) over (3.13.2-1) ... 345s Preparing to unpack .../82-ubuntu-kernel-accessories_1.549_amd64.deb ... 345s Unpacking ubuntu-kernel-accessories (1.549) over (1.548) ... 345s Preparing to unpack .../83-cloud-init_25.1-0ubuntu3_all.deb ... 345s Unpacking cloud-init (25.1-0ubuntu3) over (25.1-0ubuntu2) ... 345s Preparing to unpack .../84-python3-bcrypt_4.2.0-2.1build1_amd64.deb ... 345s Unpacking python3-bcrypt (4.2.0-2.1build1) over (4.2.0-2.1) ... 345s Setting up linux-headers-6.14.0-10 (6.14.0-10.10) ... 345s Setting up media-types (13.0.0) ... 345s Installing new version of config file /etc/mime.types ... 345s Setting up linux-headers-6.14.0-10-generic (6.14.0-10.10) ... 345s Setting up ubuntu-kernel-accessories (1.549) ... 345s Setting up libapparmor1:amd64 (4.1.0~beta5-0ubuntu8) ... 345s Setting up pci.ids (0.0~2025.03.09-1) ... 345s Setting up libnewt0.52:amd64 (0.52.24-4ubuntu2) ... 345s Setting up apt-utils (2.9.33) ... 345s Setting up libdebuginfod-common (0.192-4) ... 345s Setting up exfatprogs (1.2.8-1) ... 345s Setting up linux-firmware (20250310.git9e1370d3-0ubuntu1) ... 345s Setting up bpftool (7.6.0+6.14.0-10.10) ... 345s Setting up libestr0:amd64 (0.1.11-2) ... 345s Setting up libbrotli1:amd64 (1.1.0-2build4) ... 345s Setting up libsqlite3-0:amd64 (3.46.1-2) ... 345s Setting up dosfstools (4.2-1.2) ... 345s Setting up rsyslog (8.2412.0-2ubuntu2) ... 345s info: The user `syslog' is already a member of `adm'. 346s Setting up binutils-common:amd64 (2.44-3ubuntu1) ... 346s Setting up libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) ... 346s Setting up linux-libc-dev:amd64 (6.14.0-10.10) ... 346s Setting up libctf-nobfd0:amd64 (2.44-3ubuntu1) ... 346s Setting up systemd (257.3-1ubuntu3) ... 346s /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring. 346s Created symlink '/run/systemd/system/tmp.mount' → '/dev/null'. 346s /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring. 347s Setting up libparted2t64:amd64 (3.6-5) ... 347s Removing 'diversion of /lib/x86_64-linux-gnu/libparted.so.2 to /lib/x86_64-linux-gnu/libparted.so.2.usr-is-merged by libparted2t64' 347s Removing 'diversion of /lib/x86_64-linux-gnu/libparted.so.2.0.5 to /lib/x86_64-linux-gnu/libparted.so.2.0.5.usr-is-merged by libparted2t64' 347s Setting up linux-headers-generic (6.14.0-10.10) ... 347s Setting up libjemalloc2:amd64 (5.3.0-3) ... 347s Setting up locales (2.41-1ubuntu1) ... 347s Installing new version of config file /etc/locale.alias ... 348s Generating locales (this might take a while)... 349s en_US.UTF-8... done 349s Generation complete. 349s Setting up libsframe1:amd64 (2.44-3ubuntu1) ... 349s Setting up libpython3.13-minimal:amd64 (3.13.2-2) ... 349s Setting up apparmor (4.1.0~beta5-0ubuntu8) ... 349s Installing new version of config file /etc/apparmor.d/fusermount3 ... 349s Installing new version of config file /etc/apparmor.d/lsusb ... 349s Installing new version of config file /etc/apparmor.d/openvpn ... 350s Reloading AppArmor profiles 351s Setting up libftdi1-2:amd64 (1.5-8build1) ... 351s Setting up libglib2.0-data (2.84.0-1) ... 351s Setting up systemd-cryptsetup (257.3-1ubuntu3) ... 351s Setting up libncurses6:amd64 (6.5+20250216-2) ... 351s Setting up strace (6.13+ds-1ubuntu1) ... 351s Setting up xz-utils (5.6.4-1) ... 351s Setting up systemd-timesyncd (257.3-1ubuntu3) ... 352s systemd-time-wait-sync.service is a disabled or a static unit not running, not starting it. 352s Setting up libatomic1:amd64 (15-20250222-0ubuntu1) ... 352s Setting up udev (257.3-1ubuntu3) ... 353s Setting up linux-modules-6.14.0-10-generic (6.14.0-10.10) ... 354s Setting up libncursesw6:amd64 (6.5+20250216-2) ... 354s Setting up libpci3:amd64 (1:3.13.0-2) ... 354s Setting up whiptail (0.52.24-4ubuntu2) ... 354s Setting up python-apt-common (2.9.9build1) ... 354s Setting up pnp.ids (0.393-3) ... 354s Setting up libnl-3-200:amd64 (3.7.0-1) ... 354s Setting up python3.13-minimal (3.13.2-2) ... 355s Setting up libgpgme11t64:amd64 (1.24.2-1ubuntu2) ... 355s Setting up libbinutils:amd64 (2.44-3ubuntu1) ... 355s Setting up libc-dev-bin (2.41-1ubuntu1) ... 355s Setting up libpython3.13-stdlib:amd64 (3.13.2-2) ... 355s Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2ubuntu5) ... 355s Setting up rsync (3.4.1+ds1-3) ... 356s rsync.service is a disabled or a static unit not running, not starting it. 356s Setting up python3.13-gdbm (3.13.2-2) ... 356s Setting up libpython3-stdlib:amd64 (3.13.2-2) ... 356s Setting up systemd-resolved (257.3-1ubuntu3) ... 356s Setting up initramfs-tools-bin (0.146ubuntu1) ... 356s Setting up ncurses-term (6.5+20250216-2) ... 356s Setting up libctf0:amd64 (2.44-3ubuntu1) ... 356s Setting up libpython3.13:amd64 (3.13.2-2) ... 356s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 356s Setting up libdebuginfod1t64:amd64 (0.192-4) ... 356s Setting up systemd-sysv (257.3-1ubuntu3) ... 356s Setting up linux-headers-virtual (6.14.0-10.10) ... 356s Setting up libcurl4t64:amd64 (8.12.1-3ubuntu1) ... 356s Setting up python3.13 (3.13.2-2) ... 357s Setting up htop (3.4.0-2) ... 357s Setting up linux-image-6.14.0-10-generic (6.14.0-10.10) ... 359s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.12.0-16-generic 359s I: /boot/initrd.img.old is now a symlink to initrd.img-6.12.0-16-generic 359s I: /boot/vmlinuz is now a symlink to vmlinuz-6.14.0-10-generic 359s I: /boot/initrd.img is now a symlink to initrd.img-6.14.0-10-generic 359s Setting up parted (3.6-5) ... 359s Setting up libnss-systemd:amd64 (257.3-1ubuntu3) ... 359s Setting up python3 (3.13.2-2) ... 360s Setting up python3-newt:amd64 (0.52.24-4ubuntu2) ... 360s Setting up python3-markupsafe (2.1.5-1build4) ... 360s Setting up linux-modules-extra-6.14.0-10-generic (6.14.0-10.10) ... 362s Setting up libnl-route-3-200:amd64 (3.7.0-1) ... 362s Setting up hwdata (0.393-3) ... 362s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 362s Setting up libglib2.0-0t64:amd64 (2.84.0-1) ... 362s No schema files found: doing nothing. 362s Setting up libgprofng0:amd64 (2.44-3ubuntu1) ... 362s Setting up linux-perf (6.14.0-10.10) ... 362s Setting up gir1.2-glib-2.0:amd64 (2.84.0-1) ... 362s Setting up pciutils (1:3.13.0-2) ... 362s Setting up python3-rpds-py (0.21.0-2ubuntu2) ... 362s Setting up libmm-glib0:amd64 (1.23.4-0ubuntu3) ... 362s Setting up libnl-genl-3-200:amd64 (3.7.0-1) ... 362s Setting up libpam-systemd:amd64 (257.3-1ubuntu3) ... 362s Setting up libc6-dev:amd64 (2.41-1ubuntu1) ... 362s Setting up libgirepository-1.0-1:amd64 (1.83.4-1) ... 362s Setting up curl (8.12.1-3ubuntu1) ... 362s Setting up linux-image-virtual (6.14.0-10.10) ... 362s Setting up initramfs-tools-core (0.146ubuntu1) ... 362s Setting up linux-tools-common (6.14.0-10.10) ... 362s Setting up python3-systemd (235-1build6) ... 362s Setting up python3-cffi-backend:amd64 (1.17.1-2build2) ... 362s Setting up binutils-x86-64-linux-gnu (2.44-3ubuntu1) ... 362s Setting up linux-image-generic (6.14.0-10.10) ... 362s Setting up python3-dbus (1.3.2-5build5) ... 363s Setting up linux-tools-6.14.0-10 (6.14.0-10.10) ... 363s Setting up initramfs-tools (0.146ubuntu1) ... 363s Installing new version of config file /etc/kernel/postinst.d/initramfs-tools ... 363s Installing new version of config file /etc/kernel/postrm.d/initramfs-tools ... 363s update-initramfs: deferring update (trigger activated) 363s Setting up linux-generic (6.14.0-10.10) ... 363s Setting up ubuntu-minimal (1.549) ... 363s Setting up python3-apt (2.9.9build1) ... 363s Setting up python3-bcrypt (4.2.0-2.1build1) ... 363s Setting up python3-yaml (6.0.2-1build2) ... 363s Setting up libfwupd3:amd64 (2.0.6-4) ... 363s Setting up python3-lazr.uri (1.0.6-6) ... 363s Setting up binutils (2.44-3ubuntu1) ... 363s Setting up ubuntu-standard (1.549) ... 363s Setting up cloud-init-base (25.1-0ubuntu3) ... 364s Setting up linux-virtual (6.14.0-10.10) ... 364s Setting up gir1.2-girepository-2.0:amd64 (1.83.4-1) ... 364s Setting up python3-gi (3.50.0-4build1) ... 365s Setting up linux-tools-6.14.0-10-generic (6.14.0-10.10) ... 365s Setting up fwupd (2.0.6-4) ... 365s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 365s Setting up cloud-init (25.1-0ubuntu3) ... 365s Processing triggers for man-db (2.13.0-1) ... 367s Processing triggers for dbus (1.16.2-1ubuntu1) ... 367s Processing triggers for shared-mime-info (2.4-5) ... 367s Warning: program compiled against libxml 212 using older 209 367s Processing triggers for libc-bin (2.41-1ubuntu1) ... 367s Processing triggers for linux-image-6.14.0-10-generic (6.14.0-10.10) ... 367s /etc/kernel/postinst.d/initramfs-tools: 367s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 367s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 377s /etc/kernel/postinst.d/zz-update-grub: 377s Sourcing file `/etc/default/grub' 377s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 377s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 377s Generating grub configuration file ... 377s Found linux image: /boot/vmlinuz-6.14.0-10-generic 377s Found initrd image: /boot/initrd.img-6.14.0-10-generic 377s Found linux image: /boot/vmlinuz-6.12.0-16-generic 377s Found initrd image: /boot/initrd.img-6.12.0-16-generic 377s Found linux image: /boot/vmlinuz-6.11.0-8-generic 377s Found initrd image: /boot/initrd.img-6.11.0-8-generic 378s Warning: os-prober will not be executed to detect other bootable partitions. 378s Systems on them will not be added to the GRUB boot configuration. 378s Check GRUB_DISABLE_OS_PROBER documentation entry. 378s Adding boot menu entry for UEFI Firmware Settings ... 378s done 378s Processing triggers for initramfs-tools (0.146ubuntu1) ... 378s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 378s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 388s Reading package lists... 388s Building dependency tree... 388s Reading state information... 388s Solving dependencies... 388s The following packages will be REMOVED: 388s libnl-genl-3-200* libnsl2* libpython3.12-minimal* libpython3.12-stdlib* 388s libpython3.12t64* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 388s linux-headers-6.12.0-16* linux-headers-6.12.0-16-generic* 388s linux-image-6.11.0-8-generic* linux-image-6.12.0-16-generic* 388s linux-modules-6.11.0-8-generic* linux-modules-6.12.0-16-generic* 388s linux-modules-extra-6.12.0-16-generic* linux-tools-6.11.0-8* 388s linux-tools-6.11.0-8-generic* linux-tools-6.12.0-16* 388s linux-tools-6.12.0-16-generic* 389s 0 upgraded, 0 newly installed, 18 to remove and 5 not upgraded. 389s After this operation, 545 MB disk space will be freed. 389s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 148643 files and directories currently installed.) 389s Removing libnl-genl-3-200:amd64 (3.7.0-1) ... 389s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 389s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 389s Removing libpython3.12t64:amd64 (3.12.9-1) ... 389s Removing libpython3.12-stdlib:amd64 (3.12.9-1) ... 389s Removing libnsl2:amd64 (1.3.0-3build3) ... 389s Removing libpython3.12-minimal:amd64 (3.12.9-1) ... 389s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 390s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 392s Removing linux-headers-6.12.0-16-generic (6.12.0-16.16) ... 392s Removing linux-headers-6.12.0-16 (6.12.0-16.16) ... 394s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 394s /etc/kernel/postrm.d/initramfs-tools: 394s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 395s /etc/kernel/postrm.d/zz-update-grub: 395s Sourcing file `/etc/default/grub' 395s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 395s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 395s Generating grub configuration file ... 395s Found linux image: /boot/vmlinuz-6.14.0-10-generic 395s Found initrd image: /boot/initrd.img-6.14.0-10-generic 395s Found linux image: /boot/vmlinuz-6.12.0-16-generic 395s Found initrd image: /boot/initrd.img-6.12.0-16-generic 395s Warning: os-prober will not be executed to detect other bootable partitions. 395s Systems on them will not be added to the GRUB boot configuration. 395s Check GRUB_DISABLE_OS_PROBER documentation entry. 395s Adding boot menu entry for UEFI Firmware Settings ... 395s done 395s Removing linux-image-6.12.0-16-generic (6.12.0-16.16) ... 395s W: Removing the running kernel 395s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic 395s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic 395s /etc/kernel/postrm.d/initramfs-tools: 395s update-initramfs: Deleting /boot/initrd.img-6.12.0-16-generic 395s /etc/kernel/postrm.d/zz-update-grub: 395s Sourcing file `/etc/default/grub' 395s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 395s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 395s Generating grub configuration file ... 396s Found linux image: /boot/vmlinuz-6.14.0-10-generic 396s Found initrd image: /boot/initrd.img-6.14.0-10-generic 396s Warning: os-prober will not be executed to detect other bootable partitions. 396s Systems on them will not be added to the GRUB boot configuration. 396s Check GRUB_DISABLE_OS_PROBER documentation entry. 396s Adding boot menu entry for UEFI Firmware Settings ... 396s done 396s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 396s Removing linux-modules-extra-6.12.0-16-generic (6.12.0-16.16) ... 398s Removing linux-modules-6.12.0-16-generic (6.12.0-16.16) ... 398s Removing linux-tools-6.12.0-16-generic (6.12.0-16.16) ... 398s Removing linux-tools-6.12.0-16 (6.12.0-16.16) ... 398s Processing triggers for libc-bin (2.41-1ubuntu1) ... 398s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76972 files and directories currently installed.) 398s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 398s Purging configuration files for libpython3.12-minimal:amd64 (3.12.9-1) ... 398s Purging configuration files for linux-modules-extra-6.12.0-16-generic (6.12.0-16.16) ... 398s Purging configuration files for linux-modules-6.12.0-16-generic (6.12.0-16.16) ... 398s dpkg: warning: while removing linux-modules-6.12.0-16-generic, directory '/lib/modules/6.12.0-16-generic' not empty so not removed 398s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 398s Purging configuration files for linux-image-6.12.0-16-generic (6.12.0-16.16) ... 398s rmdir: failed to remove '/lib/modules/6.12.0-16-generic': Directory not empty 398s autopkgtest [22:08:36]: upgrading testbed (apt dist-upgrade and autopurge) 398s Reading package lists... 399s Building dependency tree... 399s Reading state information... 399s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 399s Starting 2 pkgProblemResolver with broken count: 0 399s Done 399s Entering ResolveByKeep 400s 400s Calculating upgrade... 400s The following packages will be upgraded: 400s libc-bin libc-dev-bin libc6 libc6-dev locales 400s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 400s Need to get 10.5 MB of archives. 400s After this operation, 1024 B of additional disk space will be used. 400s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6-dev amd64 2.41-1ubuntu2 [2183 kB] 401s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-dev-bin amd64 2.41-1ubuntu2 [24.7 kB] 401s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6 amd64 2.41-1ubuntu2 [3327 kB] 401s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-bin amd64 2.41-1ubuntu2 [700 kB] 401s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 locales all 2.41-1ubuntu2 [4246 kB] 401s Preconfiguring packages ... 401s Fetched 10.5 MB in 1s (8992 kB/s) 401s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 401s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_amd64.deb ... 401s Unpacking libc6-dev:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 402s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_amd64.deb ... 402s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 402s Preparing to unpack .../libc6_2.41-1ubuntu2_amd64.deb ... 402s Unpacking libc6:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 402s Setting up libc6:amd64 (2.41-1ubuntu2) ... 402s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 402s Preparing to unpack .../libc-bin_2.41-1ubuntu2_amd64.deb ... 402s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 402s Setting up libc-bin (2.41-1ubuntu2) ... 402s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 402s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 402s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 403s Setting up locales (2.41-1ubuntu2) ... 403s Generating locales (this might take a while)... 405s en_US.UTF-8... done 405s Generation complete. 405s Setting up libc-dev-bin (2.41-1ubuntu2) ... 405s Setting up libc6-dev:amd64 (2.41-1ubuntu2) ... 405s Processing triggers for man-db (2.13.0-1) ... 405s Processing triggers for systemd (257.3-1ubuntu3) ... 406s Reading package lists... 406s Building dependency tree... 406s Reading state information... 407s Starting pkgProblemResolver with broken count: 0 407s Starting 2 pkgProblemResolver with broken count: 0 407s Done 407s Solving dependencies... 408s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 408s autopkgtest [22:08:46]: rebooting testbed after setup commands that affected boot 433s Reading package lists... 434s Building dependency tree... 434s Reading state information... 434s Starting pkgProblemResolver with broken count: 0 434s Starting 2 pkgProblemResolver with broken count: 0 434s Done 435s The following NEW packages will be installed: 435s build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu 435s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 435s fonts-font-awesome fonts-glyphicons-halflings g++ g++-14 435s g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 435s gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-14 435s gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools 435s javascript-common libamd3 libasan8 libblas-dev libblas3 libbz2-dev libcairo2 435s libcc1-0 libcolamd3 libdatrie1 libdeflate-dev libdeflate0 libfontconfig1 435s libgcc-14-dev libgfortran-14-dev libgfortran5 libglpk40 libgomp1 435s libgraphite2-3 libharfbuzz0b libhwasan0 libice6 libicu-dev libisl23 libitm1 435s libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 435s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 435s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 435s libjs-jquery-ui libjs-json libjs-microplugin.js libjs-popper.js 435s libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 435s liblerc4 liblsan0 libltdl7 liblzma-dev libmpc3 libncurses-dev libpango-1.0-0 435s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper2 libpcre2-16-0 435s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 435s libpng-dev libquadmath0 libreadline-dev libsharpyuv0 libsm6 libstdc++-14-dev 435s libsuitesparseconfig7 libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-dev 435s libtk8.6 libtsan2 libubsan1 libwebp7 libxcb-render0 libxcb-shm0 libxft2 435s libxrender1 libxss1 libxt6t64 littler node-bootstrap-sass node-html5shiv 435s node-normalize.css pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core 435s r-base-dev r-cran-ade4 r-cran-adegenet r-cran-adephylo r-cran-ape 435s r-cran-askpass r-cran-base64enc r-cran-boot r-cran-bslib r-cran-cachem 435s r-cran-cli r-cran-cluster r-cran-colorspace r-cran-commonmark r-cran-cpp11 435s r-cran-crayon r-cran-curl r-cran-digest r-cran-dplyr r-cran-fansi 435s r-cran-farver r-cran-fastmap r-cran-fontawesome r-cran-fs r-cran-generics 435s r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-hms r-cran-htmltools 435s r-cran-httpuv r-cran-httr r-cran-igraph r-cran-isoband r-cran-jquerylib 435s r-cran-jsonlite r-cran-labeling r-cran-later r-cran-lattice r-cran-lifecycle 435s r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-memoise 435s r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme r-cran-openssl 435s r-cran-permute r-cran-phylobase r-cran-pillar r-cran-pixmap r-cran-pkgconfig 435s r-cran-pkgkitten r-cran-plyr r-cran-prettyunits r-cran-progress 435s r-cran-promises r-cran-purrr r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer 435s r-cran-rcpp r-cran-rcpparmadillo r-cran-reshape2 r-cran-rlang r-cran-rncl 435s r-cran-rnexml r-cran-sass r-cran-scales r-cran-segmented r-cran-seqinr 435s r-cran-shiny r-cran-sourcetools r-cran-sp r-cran-stringi r-cran-stringr 435s r-cran-sys r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-utf8 435s r-cran-uuid r-cran-vctrs r-cran-vegan r-cran-viridislite r-cran-withr 435s r-cran-xml r-cran-xml2 r-cran-xtable unzip x11-common xdg-utils zip 435s zlib1g-dev 435s 0 upgraded, 216 newly installed, 0 to remove and 0 not upgraded. 435s Need to get 234 MB of archives. 435s After this operation, 624 MB of additional disk space will be used. 435s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 435s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 435s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [11.9 MB] 436s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-17ubuntu3 [1030 B] 436s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [5586 B] 436s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.2.0-1ubuntu1 [22.4 kB] 436s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 15-20250222-0ubuntu1 [47.0 kB] 436s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 15-20250222-0ubuntu1 [148 kB] 436s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 15-20250222-0ubuntu1 [28.6 kB] 436s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 15-20250222-0ubuntu1 [3055 kB] 436s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 15-20250222-0ubuntu1 [1355 kB] 436s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 15-20250222-0ubuntu1 [2756 kB] 436s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 15-20250222-0ubuntu1 [1205 kB] 436s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 15-20250222-0ubuntu1 [1677 kB] 436s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 15-20250222-0ubuntu1 [152 kB] 436s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-17ubuntu3 [2816 kB] 436s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [23.3 MB] 437s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-17ubuntu3 [536 kB] 437s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1208 B] 437s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.2.0-1ubuntu1 [5004 B] 437s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-17ubuntu3 [2486 kB] 437s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [13.4 MB] 437s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-17ubuntu3 [21.8 kB] 437s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [968 B] 437s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.2.0-1ubuntu1 [1100 B] 437s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 437s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 dctrl-tools amd64 2.24-3build3 [106 kB] 437s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 437s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 437s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-2ubuntu1 [37.4 kB] 437s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-2ubuntu1 [164 kB] 437s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-2ubuntu1 [180 kB] 438s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 438s Get:34 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 438s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 15-20250222-0ubuntu1 [919 kB] 438s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran-14-dev amd64 14.2.0-17ubuntu3 [966 kB] 438s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [12.6 MB] 438s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14 amd64 14.2.0-17ubuntu3 [13.6 kB] 438s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1022 B] 438s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran amd64 4:14.2.0-1ubuntu1 [1174 B] 438s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 icu-devtools amd64 76.1-1ubuntu2 [237 kB] 438s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 12 [5216 B] 438s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libsuitesparseconfig7 amd64 1:7.8.3+dfsg-3 [13.5 kB] 438s Get:44 http://ftpmaster.internal/ubuntu plucky/universe amd64 libamd3 amd64 1:7.8.3+dfsg-3 [31.0 kB] 438s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 438s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas-dev amd64 3.12.1-2 [338 kB] 438s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libbz2-dev amd64 1.0.8-6 [33.8 kB] 438s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 438s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 438s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 438s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 438s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 438s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libcolamd3 amd64 1:7.8.3+dfsg-3 [19.5 kB] 438s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 438s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB] 438s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate-dev amd64 1.23-1 [71.7 kB] 438s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl7 amd64 2.5.4-4 [46.5 kB] 438s Get:58 http://ftpmaster.internal/ubuntu plucky/universe amd64 libglpk40 amd64 5.0-1build2 [369 kB] 438s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 438s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB] 438s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 438s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 438s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 libicu-dev amd64 76.1-1ubuntu2 [12.6 MB] 438s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 438s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8-dev amd64 2.1.5-3ubuntu2 [324 kB] 438s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 438s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 438s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 438s Get:69 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 438s Get:70 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 438s Get:71 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 438s Get:72 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 438s Get:73 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 438s Get:74 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 438s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 438s Get:76 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 438s Get:77 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 438s Get:78 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 438s Get:79 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 438s Get:80 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 439s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 439s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 439s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack-dev amd64 3.12.1-2 [6489 kB] 439s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 439s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses-dev amd64 6.5+20250216-2 [424 kB] 439s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 439s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 439s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.56.2-1 [255 kB] 439s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.56.2-1 [52.6 kB] 439s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.56.2-1 [29.1 kB] 439s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB] 439s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB] 439s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.45-1 [268 kB] 439s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-32-0 amd64 10.45-1 [251 kB] 439s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-posix3 amd64 10.45-1 [7204 B] 439s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-dev amd64 10.45-1 [908 kB] 439s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 libpkgconf3 amd64 1.8.1-4 [32.3 kB] 439s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 439s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 libpng-dev amd64 1.6.47-1 [298 kB] 439s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libreadline-dev amd64 8.2-6 [184 kB] 439s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 439s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 439s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB] 440s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 440s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 440s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 440s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 440s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 440s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB] 440s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 440s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu2 [185 kB] 440s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 440s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 440s Get:114 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.3-1 [28.9 MB] 441s Get:115 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-2 [96.6 kB] 441s Get:116 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-2 [2554 B] 441s Get:117 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 441s Get:118 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 441s Get:119 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 441s Get:120 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma-dev amd64 5.6.4-1 [189 kB] 441s Get:121 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf-bin amd64 1.8.1-4 [21.6 kB] 441s Get:122 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf amd64 1.8.1-4 [16.8 kB] 441s Get:123 http://ftpmaster.internal/ubuntu plucky/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3 [193 kB] 441s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-dev all 4.4.3-1 [4176 B] 441s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 441s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mass amd64 7.3-64-1 [1114 kB] 441s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pixmap all 0.4-13-1 [213 kB] 441s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 441s Get:129 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sp amd64 1:2.2-0+dfsg-1 [1444 kB] 441s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 441s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.14-1 [1998 kB] 441s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpparmadillo amd64 14.2.3-1-1 [864 kB] 441s Get:133 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ade4 amd64 1.7-23-1 [5414 kB] 442s Get:134 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB] 442s Get:135 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 442s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.5-1 [1719 kB] 442s Get:137 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 442s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 442s Get:139 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrix amd64 1.7-3-1 [4349 kB] 442s Get:140 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 442s Get:141 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 442s Get:142 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cpp11 all 0.5.2-1 [233 kB] 442s Get:143 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-igraph amd64 2.1.4-1 [5357 kB] 443s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nlme amd64 3.1.167-1 [2320 kB] 443s Get:145 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB] 443s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ape amd64 5.8-1-1 [2918 kB] 443s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB] 443s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 443s Get:149 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB] 443s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB] 443s Get:151 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 443s Get:152 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 443s Get:153 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB] 443s Get:154 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 443s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 443s Get:156 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 443s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 443s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 443s Get:159 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB] 443s Get:160 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 443s Get:161 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.2-2 [137 kB] 443s Get:162 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 443s Get:163 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 443s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 443s Get:165 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB] 443s Get:166 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 443s Get:167 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 443s Get:168 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 443s Get:169 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 443s Get:170 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 443s Get:171 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 444s Get:172 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 444s Get:173 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB] 444s Get:174 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB] 444s Get:175 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 444s Get:176 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colorspace amd64 2.1-1+dfsg-1 [1563 kB] 444s Get:177 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-munsell all 0.5.1-1 [213 kB] 444s Get:178 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 444s Get:179 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridislite all 0.4.2-2 [1088 kB] 444s Get:180 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scales all 1.3.0-1 [603 kB] 444s Get:181 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 444s Get:182 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 444s Get:183 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 444s Get:184 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB] 444s Get:185 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 444s Get:186 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-segmented all 2.1-4-1 [1376 kB] 444s Get:187 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-seqinr amd64 4.2-36-1 [4015 kB] 444s Get:188 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-boot all 1.3-31-1 [635 kB] 445s Get:189 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB] 445s Get:190 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringi amd64 1.8.4-1build1 [927 kB] 445s Get:191 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 445s Get:192 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reshape2 amd64 1.4.4-2build1 [114 kB] 445s Get:193 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB] 445s Get:194 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB] 445s Get:195 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB] 445s Get:196 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-permute all 0.9-7-1 [228 kB] 445s Get:197 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cluster amd64 2.1.8.1-1 [579 kB] 445s Get:198 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vegan amd64 2.6-10+dfsg-1ubuntu2 [3145 kB] 445s Get:199 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-adegenet amd64 2.1.11-1 [2728 kB] 445s Get:200 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-hms all 1.1.3-1 [96.5 kB] 445s Get:201 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-prettyunits all 1.2.0-1 [162 kB] 445s Get:202 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-progress all 1.2.3-1 [91.9 kB] 445s Get:203 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rncl amd64 0.8.7-1 [513 kB] 446s Get:204 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xml amd64 3.99-0.18-1 [1748 kB] 446s Get:205 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-curl amd64 6.2.1+dfsg-1ubuntu1 [197 kB] 446s Get:206 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB] 446s Get:207 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB] 446s Get:208 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-openssl amd64 2.3.2+dfsg-1 [407 kB] 446s Get:209 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 446s Get:210 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-uuid amd64 1.2-1-1 [48.5 kB] 446s Get:211 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-purrr amd64 1.0.4-1 [552 kB] 446s Get:212 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 446s Get:213 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xml2 amd64 1.3.7-1 [334 kB] 446s Get:214 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rnexml all 2.4.11+ds-1 [744 kB] 446s Get:215 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-phylobase amd64 0.8.12-1 [693 kB] 446s Get:216 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-adephylo amd64 1.1-16-1 [591 kB] 447s Preconfiguring packages ... 447s Fetched 234 MB in 12s (20.3 MB/s) 447s Selecting previously unselected package libisl23:amd64. 447s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 447s Preparing to unpack .../000-libisl23_0.27-1_amd64.deb ... 447s Unpacking libisl23:amd64 (0.27-1) ... 447s Selecting previously unselected package libmpc3:amd64. 447s Preparing to unpack .../001-libmpc3_1.3.1-1build2_amd64.deb ... 447s Unpacking libmpc3:amd64 (1.3.1-1build2) ... 447s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 447s Preparing to unpack .../002-cpp-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 447s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 447s Selecting previously unselected package cpp-14. 447s Preparing to unpack .../003-cpp-14_14.2.0-17ubuntu3_amd64.deb ... 447s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 447s Selecting previously unselected package cpp-x86-64-linux-gnu. 447s Preparing to unpack .../004-cpp-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 447s Unpacking cpp-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 447s Selecting previously unselected package cpp. 447s Preparing to unpack .../005-cpp_4%3a14.2.0-1ubuntu1_amd64.deb ... 447s Unpacking cpp (4:14.2.0-1ubuntu1) ... 447s Selecting previously unselected package libcc1-0:amd64. 447s Preparing to unpack .../006-libcc1-0_15-20250222-0ubuntu1_amd64.deb ... 447s Unpacking libcc1-0:amd64 (15-20250222-0ubuntu1) ... 447s Selecting previously unselected package libgomp1:amd64. 447s Preparing to unpack .../007-libgomp1_15-20250222-0ubuntu1_amd64.deb ... 447s Unpacking libgomp1:amd64 (15-20250222-0ubuntu1) ... 447s Selecting previously unselected package libitm1:amd64. 447s Preparing to unpack .../008-libitm1_15-20250222-0ubuntu1_amd64.deb ... 447s Unpacking libitm1:amd64 (15-20250222-0ubuntu1) ... 447s Selecting previously unselected package libasan8:amd64. 447s Preparing to unpack .../009-libasan8_15-20250222-0ubuntu1_amd64.deb ... 447s Unpacking libasan8:amd64 (15-20250222-0ubuntu1) ... 447s Selecting previously unselected package liblsan0:amd64. 447s Preparing to unpack .../010-liblsan0_15-20250222-0ubuntu1_amd64.deb ... 447s Unpacking liblsan0:amd64 (15-20250222-0ubuntu1) ... 447s Selecting previously unselected package libtsan2:amd64. 447s Preparing to unpack .../011-libtsan2_15-20250222-0ubuntu1_amd64.deb ... 447s Unpacking libtsan2:amd64 (15-20250222-0ubuntu1) ... 448s Selecting previously unselected package libubsan1:amd64. 448s Preparing to unpack .../012-libubsan1_15-20250222-0ubuntu1_amd64.deb ... 448s Unpacking libubsan1:amd64 (15-20250222-0ubuntu1) ... 448s Selecting previously unselected package libhwasan0:amd64. 448s Preparing to unpack .../013-libhwasan0_15-20250222-0ubuntu1_amd64.deb ... 448s Unpacking libhwasan0:amd64 (15-20250222-0ubuntu1) ... 448s Selecting previously unselected package libquadmath0:amd64. 448s Preparing to unpack .../014-libquadmath0_15-20250222-0ubuntu1_amd64.deb ... 448s Unpacking libquadmath0:amd64 (15-20250222-0ubuntu1) ... 448s Selecting previously unselected package libgcc-14-dev:amd64. 448s Preparing to unpack .../015-libgcc-14-dev_14.2.0-17ubuntu3_amd64.deb ... 448s Unpacking libgcc-14-dev:amd64 (14.2.0-17ubuntu3) ... 448s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 448s Preparing to unpack .../016-gcc-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 448s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 448s Selecting previously unselected package gcc-14. 448s Preparing to unpack .../017-gcc-14_14.2.0-17ubuntu3_amd64.deb ... 448s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 448s Selecting previously unselected package gcc-x86-64-linux-gnu. 448s Preparing to unpack .../018-gcc-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 448s Unpacking gcc-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 448s Selecting previously unselected package gcc. 448s Preparing to unpack .../019-gcc_4%3a14.2.0-1ubuntu1_amd64.deb ... 448s Unpacking gcc (4:14.2.0-1ubuntu1) ... 448s Selecting previously unselected package libstdc++-14-dev:amd64. 448s Preparing to unpack .../020-libstdc++-14-dev_14.2.0-17ubuntu3_amd64.deb ... 448s Unpacking libstdc++-14-dev:amd64 (14.2.0-17ubuntu3) ... 448s Selecting previously unselected package g++-14-x86-64-linux-gnu. 448s Preparing to unpack .../021-g++-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 448s Unpacking g++-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 449s Selecting previously unselected package g++-14. 449s Preparing to unpack .../022-g++-14_14.2.0-17ubuntu3_amd64.deb ... 449s Unpacking g++-14 (14.2.0-17ubuntu3) ... 449s Selecting previously unselected package g++-x86-64-linux-gnu. 449s Preparing to unpack .../023-g++-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 449s Unpacking g++-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 449s Selecting previously unselected package g++. 449s Preparing to unpack .../024-g++_4%3a14.2.0-1ubuntu1_amd64.deb ... 449s Unpacking g++ (4:14.2.0-1ubuntu1) ... 449s Selecting previously unselected package build-essential. 449s Preparing to unpack .../025-build-essential_12.10ubuntu1_amd64.deb ... 449s Unpacking build-essential (12.10ubuntu1) ... 449s Selecting previously unselected package dctrl-tools. 449s Preparing to unpack .../026-dctrl-tools_2.24-3build3_amd64.deb ... 449s Unpacking dctrl-tools (2.24-3build3) ... 449s Selecting previously unselected package fonts-dejavu-mono. 449s Preparing to unpack .../027-fonts-dejavu-mono_2.37-8_all.deb ... 449s Unpacking fonts-dejavu-mono (2.37-8) ... 449s Selecting previously unselected package fonts-dejavu-core. 449s Preparing to unpack .../028-fonts-dejavu-core_2.37-8_all.deb ... 449s Unpacking fonts-dejavu-core (2.37-8) ... 449s Selecting previously unselected package fontconfig-config. 449s Preparing to unpack .../029-fontconfig-config_2.15.0-2ubuntu1_amd64.deb ... 449s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 449s Selecting previously unselected package libfontconfig1:amd64. 449s Preparing to unpack .../030-libfontconfig1_2.15.0-2ubuntu1_amd64.deb ... 449s Unpacking libfontconfig1:amd64 (2.15.0-2ubuntu1) ... 449s Selecting previously unselected package fontconfig. 449s Preparing to unpack .../031-fontconfig_2.15.0-2ubuntu1_amd64.deb ... 449s Unpacking fontconfig (2.15.0-2ubuntu1) ... 449s Selecting previously unselected package fonts-font-awesome. 449s Preparing to unpack .../032-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 449s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 449s Selecting previously unselected package fonts-glyphicons-halflings. 449s Preparing to unpack .../033-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 449s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 449s Selecting previously unselected package libgfortran5:amd64. 449s Preparing to unpack .../034-libgfortran5_15-20250222-0ubuntu1_amd64.deb ... 449s Unpacking libgfortran5:amd64 (15-20250222-0ubuntu1) ... 449s Selecting previously unselected package libgfortran-14-dev:amd64. 449s Preparing to unpack .../035-libgfortran-14-dev_14.2.0-17ubuntu3_amd64.deb ... 449s Unpacking libgfortran-14-dev:amd64 (14.2.0-17ubuntu3) ... 449s Selecting previously unselected package gfortran-14-x86-64-linux-gnu. 449s Preparing to unpack .../036-gfortran-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 449s Unpacking gfortran-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 449s Selecting previously unselected package gfortran-14. 449s Preparing to unpack .../037-gfortran-14_14.2.0-17ubuntu3_amd64.deb ... 449s Unpacking gfortran-14 (14.2.0-17ubuntu3) ... 449s Selecting previously unselected package gfortran-x86-64-linux-gnu. 449s Preparing to unpack .../038-gfortran-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 449s Unpacking gfortran-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 449s Selecting previously unselected package gfortran. 450s Preparing to unpack .../039-gfortran_4%3a14.2.0-1ubuntu1_amd64.deb ... 450s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 450s Selecting previously unselected package icu-devtools. 450s Preparing to unpack .../040-icu-devtools_76.1-1ubuntu2_amd64.deb ... 450s Unpacking icu-devtools (76.1-1ubuntu2) ... 450s Selecting previously unselected package javascript-common. 450s Preparing to unpack .../041-javascript-common_12_all.deb ... 450s Unpacking javascript-common (12) ... 450s Selecting previously unselected package libsuitesparseconfig7:amd64. 450s Preparing to unpack .../042-libsuitesparseconfig7_1%3a7.8.3+dfsg-3_amd64.deb ... 450s Unpacking libsuitesparseconfig7:amd64 (1:7.8.3+dfsg-3) ... 450s Selecting previously unselected package libamd3:amd64. 450s Preparing to unpack .../043-libamd3_1%3a7.8.3+dfsg-3_amd64.deb ... 450s Unpacking libamd3:amd64 (1:7.8.3+dfsg-3) ... 450s Selecting previously unselected package libblas3:amd64. 450s Preparing to unpack .../044-libblas3_3.12.1-2_amd64.deb ... 450s Unpacking libblas3:amd64 (3.12.1-2) ... 450s Selecting previously unselected package libblas-dev:amd64. 450s Preparing to unpack .../045-libblas-dev_3.12.1-2_amd64.deb ... 450s Unpacking libblas-dev:amd64 (3.12.1-2) ... 450s Selecting previously unselected package libbz2-dev:amd64. 450s Preparing to unpack .../046-libbz2-dev_1.0.8-6_amd64.deb ... 450s Unpacking libbz2-dev:amd64 (1.0.8-6) ... 450s Selecting previously unselected package libpixman-1-0:amd64. 450s Preparing to unpack .../047-libpixman-1-0_0.44.0-3_amd64.deb ... 450s Unpacking 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Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 454s Selecting previously unselected package r-cran-vctrs. 454s Preparing to unpack .../140-r-cran-vctrs_0.6.5-1_amd64.deb ... 454s Unpacking r-cran-vctrs (0.6.5-1) ... 454s Selecting previously unselected package r-cran-cpp11. 454s Preparing to unpack .../141-r-cran-cpp11_0.5.2-1_all.deb ... 454s Unpacking r-cran-cpp11 (0.5.2-1) ... 454s Selecting previously unselected package r-cran-igraph. 454s Preparing to unpack .../142-r-cran-igraph_2.1.4-1_amd64.deb ... 454s Unpacking r-cran-igraph (2.1.4-1) ... 454s Selecting previously unselected package r-cran-nlme. 454s Preparing to unpack .../143-r-cran-nlme_3.1.167-1_amd64.deb ... 454s Unpacking r-cran-nlme (3.1.167-1) ... 454s Selecting previously unselected package r-cran-digest. 454s Preparing to unpack .../144-r-cran-digest_0.6.37-1_amd64.deb ... 454s Unpacking r-cran-digest (0.6.37-1) ... 454s Selecting previously unselected package r-cran-ape. 454s Preparing to unpack .../145-r-cran-ape_5.8-1-1_amd64.deb ... 454s Unpacking r-cran-ape (5.8-1-1) ... 454s Selecting previously unselected package r-cran-later. 454s Preparing to unpack .../146-r-cran-later_1.4.1+dfsg-1_amd64.deb ... 454s Unpacking r-cran-later (1.4.1+dfsg-1) ... 454s Selecting previously unselected package r-cran-fastmap. 454s Preparing to unpack .../147-r-cran-fastmap_1.2.0-1_amd64.deb ... 454s Unpacking r-cran-fastmap (1.2.0-1) ... 454s Selecting previously unselected package r-cran-r6. 454s Preparing to unpack .../148-r-cran-r6_2.6.1-1_all.deb ... 454s Unpacking r-cran-r6 (2.6.1-1) ... 455s Selecting previously unselected package r-cran-promises. 455s Preparing to unpack .../149-r-cran-promises_1.3.2+dfsg-1_amd64.deb ... 455s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 455s Selecting previously unselected package r-cran-httpuv. 455s Preparing to unpack .../150-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 455s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 455s Selecting previously unselected package r-cran-mime. 455s Preparing to unpack .../151-r-cran-mime_0.12-2_amd64.deb ... 455s Unpacking r-cran-mime (0.12-2) ... 455s Selecting previously unselected package r-cran-jsonlite. 455s Preparing to unpack .../152-r-cran-jsonlite_1.9.1+dfsg-1_amd64.deb ... 455s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 455s Selecting previously unselected package r-cran-xtable. 455s Preparing to unpack .../153-r-cran-xtable_1%3a1.8-4-2_all.deb ... 455s Unpacking r-cran-xtable (1:1.8-4-2) ... 455s Selecting previously unselected package r-cran-base64enc. 455s Preparing to unpack .../154-r-cran-base64enc_0.1-3-3_amd64.deb ... 455s Unpacking r-cran-base64enc (0.1-3-3) ... 455s Selecting previously unselected package r-cran-htmltools. 455s Preparing to unpack .../155-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 455s Unpacking r-cran-htmltools (0.5.8.1-1) ... 455s Selecting previously unselected package r-cran-fontawesome. 455s Preparing to unpack .../156-r-cran-fontawesome_0.5.3-1_all.deb ... 455s Unpacking r-cran-fontawesome (0.5.3-1) ... 455s Selecting previously unselected package r-cran-sourcetools. 455s Preparing to unpack .../157-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 455s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 455s Selecting previously unselected package r-cran-crayon. 455s Preparing to unpack .../158-r-cran-crayon_1.5.3-1_all.deb ... 455s Unpacking r-cran-crayon (1.5.3-1) ... 455s Selecting previously unselected package r-cran-withr. 455s Preparing to unpack .../159-r-cran-withr_3.0.2+dfsg-1_all.deb ... 455s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 455s Selecting previously unselected package r-cran-commonmark. 455s Preparing to unpack .../160-r-cran-commonmark_1.9.2-2_amd64.deb ... 455s Unpacking r-cran-commonmark (1.9.2-2) ... 455s Selecting previously unselected package r-cran-cachem. 455s Preparing to unpack .../161-r-cran-cachem_1.1.0-1_amd64.deb ... 455s Unpacking r-cran-cachem (1.1.0-1) ... 455s Selecting previously unselected package r-cran-jquerylib. 455s Preparing to unpack .../162-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 455s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 455s Selecting previously unselected package r-cran-memoise. 455s Preparing to unpack .../163-r-cran-memoise_2.0.1-1_all.deb ... 455s Unpacking r-cran-memoise (2.0.1-1) ... 455s Selecting previously unselected package r-cran-fs. 455s Preparing to unpack .../164-r-cran-fs_1.6.5+dfsg-1_amd64.deb ... 455s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 455s Selecting previously unselected package r-cran-rappdirs. 455s Preparing to unpack .../165-r-cran-rappdirs_0.3.3-1_amd64.deb ... 455s Unpacking r-cran-rappdirs (0.3.3-1) ... 455s Selecting previously unselected package r-cran-sass. 455s Preparing to unpack .../166-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 455s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 455s Selecting previously unselected package r-cran-bslib. 455s Preparing to unpack .../167-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 455s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 455s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 455s Preparing to unpack .../168-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 455s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 455s Selecting previously unselected package r-cran-shiny. 455s Preparing to unpack .../169-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 455s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 455s Selecting previously unselected package r-cran-gtable. 456s Preparing to unpack .../170-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 456s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 456s Selecting previously unselected package r-cran-isoband. 456s Preparing to unpack .../171-r-cran-isoband_0.2.7-1_amd64.deb ... 456s Unpacking r-cran-isoband (0.2.7-1) ... 456s Selecting previously unselected package r-cran-mgcv. 456s Preparing to unpack .../172-r-cran-mgcv_1.9-1-1_amd64.deb ... 456s Unpacking r-cran-mgcv (1.9-1-1) ... 456s Selecting previously unselected package r-cran-farver. 456s Preparing to unpack .../173-r-cran-farver_2.1.2-1_amd64.deb ... 456s Unpacking r-cran-farver (2.1.2-1) ... 456s Selecting previously unselected package r-cran-labeling. 456s Preparing to unpack .../174-r-cran-labeling_0.4.3-1_all.deb ... 456s Unpacking r-cran-labeling (0.4.3-1) ... 456s Selecting previously unselected package r-cran-colorspace. 456s Preparing to unpack .../175-r-cran-colorspace_2.1-1+dfsg-1_amd64.deb ... 456s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 456s Selecting previously unselected package r-cran-munsell. 456s Preparing to unpack .../176-r-cran-munsell_0.5.1-1_all.deb ... 456s Unpacking r-cran-munsell (0.5.1-1) ... 456s Selecting previously unselected package r-cran-rcolorbrewer. 456s Preparing to unpack .../177-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 456s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 456s Selecting previously unselected package r-cran-viridislite. 456s Preparing to unpack .../178-r-cran-viridislite_0.4.2-2_all.deb ... 456s Unpacking r-cran-viridislite (0.4.2-2) ... 456s Selecting previously unselected package r-cran-scales. 456s Preparing to unpack .../179-r-cran-scales_1.3.0-1_all.deb ... 456s Unpacking r-cran-scales (1.3.0-1) ... 456s Selecting previously unselected package r-cran-fansi. 456s Preparing to unpack .../180-r-cran-fansi_1.0.5-1_amd64.deb ... 456s Unpacking r-cran-fansi (1.0.5-1) ... 456s Selecting previously unselected package r-cran-utf8. 456s Preparing to unpack .../181-r-cran-utf8_1.2.4-1_amd64.deb ... 456s Unpacking r-cran-utf8 (1.2.4-1) ... 456s Selecting previously unselected package r-cran-pillar. 456s Preparing to unpack .../182-r-cran-pillar_1.10.1+dfsg-1_all.deb ... 456s Unpacking r-cran-pillar (1.10.1+dfsg-1) ... 456s Selecting previously unselected package r-cran-tibble. 456s Preparing to unpack .../183-r-cran-tibble_3.2.1+dfsg-3_amd64.deb ... 456s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 456s Selecting previously unselected package r-cran-ggplot2. 456s Preparing to unpack .../184-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 456s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 456s Selecting previously unselected package r-cran-segmented. 456s Preparing to unpack .../185-r-cran-segmented_2.1-4-1_all.deb ... 456s Unpacking r-cran-segmented (2.1-4-1) ... 456s Selecting previously unselected package r-cran-seqinr. 456s Preparing to unpack .../186-r-cran-seqinr_4.2-36-1_amd64.deb ... 456s Unpacking r-cran-seqinr (4.2-36-1) ... 456s Selecting previously unselected package r-cran-boot. 456s Preparing to unpack .../187-r-cran-boot_1.3-31-1_all.deb ... 456s Unpacking r-cran-boot (1.3-31-1) ... 456s Selecting previously unselected package r-cran-plyr. 456s Preparing to unpack .../188-r-cran-plyr_1.8.9-1_amd64.deb ... 456s Unpacking r-cran-plyr (1.8.9-1) ... 456s Selecting previously unselected package r-cran-stringi. 456s Preparing to unpack .../189-r-cran-stringi_1.8.4-1build1_amd64.deb ... 456s Unpacking r-cran-stringi (1.8.4-1build1) ... 456s Selecting previously unselected package r-cran-stringr. 456s Preparing to unpack .../190-r-cran-stringr_1.5.1-1_all.deb ... 456s Unpacking r-cran-stringr (1.5.1-1) ... 457s Selecting previously unselected package r-cran-reshape2. 457s Preparing to unpack .../191-r-cran-reshape2_1.4.4-2build1_amd64.deb ... 457s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 457s Selecting previously unselected package r-cran-generics. 457s Preparing to unpack .../192-r-cran-generics_0.1.3-1_all.deb ... 457s Unpacking r-cran-generics (0.1.3-1) ... 457s Selecting previously unselected package r-cran-tidyselect. 457s Preparing to unpack .../193-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ... 457s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 457s Selecting previously unselected package r-cran-dplyr. 457s Preparing to unpack .../194-r-cran-dplyr_1.1.4-4_amd64.deb ... 457s Unpacking r-cran-dplyr (1.1.4-4) ... 457s Selecting previously unselected package r-cran-permute. 457s Preparing to unpack .../195-r-cran-permute_0.9-7-1_all.deb ... 457s Unpacking r-cran-permute (0.9-7-1) ... 457s Selecting previously unselected package r-cran-cluster. 457s Preparing to unpack .../196-r-cran-cluster_2.1.8.1-1_amd64.deb ... 457s Unpacking r-cran-cluster (2.1.8.1-1) ... 457s Selecting previously unselected package r-cran-vegan. 457s Preparing to unpack .../197-r-cran-vegan_2.6-10+dfsg-1ubuntu2_amd64.deb ... 457s Unpacking r-cran-vegan (2.6-10+dfsg-1ubuntu2) ... 457s Selecting previously unselected package r-cran-adegenet. 457s Preparing to unpack .../198-r-cran-adegenet_2.1.11-1_amd64.deb ... 457s Unpacking r-cran-adegenet (2.1.11-1) ... 457s Selecting previously unselected package r-cran-hms. 457s Preparing to unpack .../199-r-cran-hms_1.1.3-1_all.deb ... 457s Unpacking r-cran-hms (1.1.3-1) ... 457s Selecting previously unselected package r-cran-prettyunits. 457s Preparing to unpack .../200-r-cran-prettyunits_1.2.0-1_all.deb ... 457s Unpacking r-cran-prettyunits (1.2.0-1) ... 457s Selecting previously unselected package r-cran-progress. 457s Preparing to unpack .../201-r-cran-progress_1.2.3-1_all.deb ... 457s Unpacking r-cran-progress (1.2.3-1) ... 457s Selecting previously unselected package r-cran-rncl. 457s Preparing to unpack .../202-r-cran-rncl_0.8.7-1_amd64.deb ... 457s Unpacking r-cran-rncl (0.8.7-1) ... 457s Selecting previously unselected package r-cran-xml. 457s Preparing to unpack .../203-r-cran-xml_3.99-0.18-1_amd64.deb ... 457s Unpacking r-cran-xml (3.99-0.18-1) ... 457s Selecting previously unselected package r-cran-curl. 457s Preparing to unpack .../204-r-cran-curl_6.2.1+dfsg-1ubuntu1_amd64.deb ... 457s Unpacking r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 457s Selecting previously unselected package r-cran-sys. 457s Preparing to unpack .../205-r-cran-sys_3.4.3-1_amd64.deb ... 457s Unpacking r-cran-sys (3.4.3-1) ... 457s Selecting previously unselected package r-cran-askpass. 457s Preparing to unpack .../206-r-cran-askpass_1.2.1-1_amd64.deb ... 457s Unpacking r-cran-askpass (1.2.1-1) ... 457s Selecting previously unselected package r-cran-openssl. 457s Preparing to unpack .../207-r-cran-openssl_2.3.2+dfsg-1_amd64.deb ... 457s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 457s Selecting previously unselected package r-cran-httr. 457s Preparing to unpack .../208-r-cran-httr_1.4.7+dfsg-1_all.deb ... 457s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 457s Selecting previously unselected package r-cran-uuid. 457s Preparing to unpack .../209-r-cran-uuid_1.2-1-1_amd64.deb ... 457s Unpacking r-cran-uuid (1.2-1-1) ... 457s Selecting previously unselected package r-cran-purrr. 457s Preparing to unpack .../210-r-cran-purrr_1.0.4-1_amd64.deb ... 457s Unpacking r-cran-purrr (1.0.4-1) ... 457s Selecting previously unselected package r-cran-tidyr. 457s Preparing to unpack .../211-r-cran-tidyr_1.3.1-1_amd64.deb ... 457s Unpacking r-cran-tidyr (1.3.1-1) ... 457s Selecting previously unselected package r-cran-xml2. 457s Preparing to unpack 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Setting up libxrender1:amd64 (1:0.9.10-1.1build1) ... 458s Setting up libdatrie1:amd64 (0.2.13-3build1) ... 458s Setting up libjs-popper.js (1.16.1+ds-6) ... 458s Setting up libxcb-render0:amd64 (1.17.0-2) ... 458s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 458s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 458s Setting up unzip (6.0-28ubuntu6) ... 458s Setting up x11-common (1:7.7+23ubuntu3) ... 458s Setting up node-html5shiv (3.7.3+dfsg-5) ... 458s Setting up libdeflate0:amd64 (1.23-1) ... 458s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 458s Setting up libxcb-shm0:amd64 (1.17.0-2) ... 458s Setting up libreadline-dev:amd64 (8.2-6) ... 458s Setting up libgomp1:amd64 (15-20250222-0ubuntu1) ... 458s Setting up libjbig0:amd64 (2.1-6.1ubuntu2) ... 458s Setting up libpcre2-16-0:amd64 (10.45-1) ... 458s Setting up libjs-es5-shim (4.6.7-2) ... 458s Setting up zip (3.0-14ubuntu2) ... 458s Setting up libpcre2-32-0:amd64 (10.45-1) ... 458s Setting up libblas3:amd64 (3.12.1-2) ... 458s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 458s Setting up libtirpc-dev:amd64 (1.3.4+ds-1.3) ... 458s Setting up libpkgconf3:amd64 (1.8.1-4) ... 458s Setting up libquadmath0:amd64 (15-20250222-0ubuntu1) ... 458s Setting up libjs-d3 (3.5.17-4) ... 458s Setting up fonts-dejavu-mono (2.37-8) ... 458s Setting up libmpc3:amd64 (1.3.1-1build2) ... 458s Setting up libtcl8.6:amd64 (8.6.16+dfsg-1) ... 458s Setting up icu-devtools (76.1-1ubuntu2) ... 458s Setting up fonts-dejavu-core (2.37-8) ... 458s Setting up pkgconf-bin (1.8.1-4) ... 458s Setting up libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 458s Setting up libltdl7:amd64 (2.5.4-4) ... 458s Setting up libgfortran5:amd64 (15-20250222-0ubuntu1) ... 458s Setting up libwebp7:amd64 (1.5.0-0.1) ... 458s Setting up liblzma-dev:amd64 (5.6.4-1) ... 458s Setting up libubsan1:amd64 (15-20250222-0ubuntu1) ... 458s Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 458s Setting up libpcre2-posix3:amd64 (10.45-1) ... 458s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... 458s Setting up libhwasan0:amd64 (15-20250222-0ubuntu1) ... 458s Setting up libasan8:amd64 (15-20250222-0ubuntu1) ... 458s Setting up libsuitesparseconfig7:amd64 (1:7.8.3+dfsg-3) ... 458s Setting up libharfbuzz0b:amd64 (10.2.0-1) ... 458s Setting up libthai-data (0.1.29-2build1) ... 458s Setting up node-bootstrap-sass (3.4.3-2) ... 458s Setting up libxss1:amd64 (1:1.2.3-1build3) ... 458s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... 458s Setting up libpaper2:amd64 (2.2.5-0.3) ... 458s Setting up libtsan2:amd64 (15-20250222-0ubuntu1) ... 458s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 458s Setting up libisl23:amd64 (0.27-1) ... 458s Setting up libdeflate-dev:amd64 (1.23-1) ... 458s Setting up node-normalize.css (8.0.1-5) ... 458s Setting up libicu-dev:amd64 (76.1-1ubuntu2) ... 458s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 458s Setting up xdg-utils (1.2.1-2ubuntu1) ... 458s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 458s Setting up libcc1-0:amd64 (15-20250222-0ubuntu1) ... 458s Setting up liblsan0:amd64 (15-20250222-0ubuntu1) ... 458s Setting up libblas-dev:amd64 (3.12.1-2) ... 458s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode 458s Setting up dctrl-tools (2.24-3build3) ... 458s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 458s Setting up libitm1:amd64 (15-20250222-0ubuntu1) ... 458s Setting up libbz2-dev:amd64 (1.0.8-6) ... 458s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 458s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 458s Setting up libice6:amd64 (2:1.1.1-1) ... 458s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-3ubuntu2) ... 458s Setting up liblapack3:amd64 (3.12.1-2) ... 458s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 458s Setting up libamd3:amd64 (1:7.8.3+dfsg-3) ... 458s Setting up libpcre2-dev:amd64 (10.45-1) ... 458s Setting up libcolamd3:amd64 (1:7.8.3+dfsg-3) ... 458s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 458s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 458s Setting up libpng-dev:amd64 (1.6.47-1) ... 458s Setting up libpaper-utils (2.2.5-0.3) ... 458s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 458s Setting up pkgconf:amd64 (1.8.1-4) ... 458s Setting up libthai0:amd64 (0.1.29-2build1) ... 458s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 458s Setting up libglpk40:amd64 (5.0-1build2) ... 458s Setting up liblapack-dev:amd64 (3.12.1-2) ... 458s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode 458s Setting up cpp-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 458s Setting up cpp-14 (14.2.0-17ubuntu3) ... 458s Setting up libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 458s Setting up libfontconfig1:amd64 (2.15.0-2ubuntu1) ... 458s Setting up libgcc-14-dev:amd64 (14.2.0-17ubuntu3) ... 458s Setting up libjpeg8-dev:amd64 (8c-2ubuntu11) ... 458s Setting up libstdc++-14-dev:amd64 (14.2.0-17ubuntu3) ... 458s Setting up libsm6:amd64 (2:1.2.4-1) ... 458s Setting up cpp-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 458s Setting up libgfortran-14-dev:amd64 (14.2.0-17ubuntu3) ... 458s Setting up fontconfig (2.15.0-2ubuntu1) ... 460s Regenerating fonts cache... done. 460s Setting up libxft2:amd64 (2.3.6-1build1) ... 460s Setting up libtk8.6:amd64 (8.6.16-1) ... 460s Setting up libpango-1.0-0:amd64 (1.56.2-1) ... 460s Setting up libjpeg-dev:amd64 (8c-2ubuntu11) ... 460s Setting up libcairo2:amd64 (1.18.2-2) ... 460s Setting up libxt6t64:amd64 (1:1.2.1-1.2build1) ... 460s Setting up cpp (4:14.2.0-1ubuntu1) ... 460s Setting up gcc-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 460s Setting up libpangoft2-1.0-0:amd64 (1.56.2-1) ... 460s Setting up libpangocairo-1.0-0:amd64 (1.56.2-1) ... 460s Setting up gcc-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 460s Setting up gcc-14 (14.2.0-17ubuntu3) ... 460s Setting up gfortran-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 460s Setting up r-base-core (4.4.3-1) ... 460s Creating config file /etc/R/Renviron with new version 461s Setting up r-cran-crayon (1.5.3-1) ... 461s Setting up r-cran-labeling (0.4.3-1) ... 461s Setting up r-cran-sourcetools (0.1.7-1-1) ... 461s Setting up r-cran-lattice (0.22-6-1) ... 461s Setting up r-cran-nlme (3.1.167-1) ... 461s Setting up r-cran-farver (2.1.2-1) ... 461s Setting up g++-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 461s Setting up r-cran-xml (3.99-0.18-1) ... 461s Setting up r-cran-viridislite (0.4.2-2) ... 461s Setting up r-cran-pixmap (0.4-13-1) ... 461s Setting up r-cran-cluster (2.1.8.1-1) ... 461s Setting up g++-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 461s Setting up r-cran-commonmark (1.9.2-2) ... 461s Setting up g++-14 (14.2.0-17ubuntu3) ... 461s Setting up r-cran-r6 (2.6.1-1) ... 461s Setting up r-cran-pkgkitten (0.2.4-1) ... 461s Setting up gfortran-14 (14.2.0-17ubuntu3) ... 461s Setting up r-cran-magrittr (2.0.3-1) ... 461s Setting up r-cran-rappdirs (0.3.3-1) ... 461s Setting up r-cran-littler (0.3.20-2) ... 461s Setting up r-cran-permute (0.9-7-1) ... 461s Setting up r-cran-fs (1.6.5+dfsg-1) ... 461s Setting up r-cran-rcpp (1.0.14-1) ... 461s Setting up r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 461s Setting up r-cran-boot (1.3-31-1) ... 461s Setting up r-cran-rlang (1.1.5-1) ... 461s Setting up littler (0.3.20-2) ... 461s Setting up r-cran-uuid (1.2-1-1) ... 461s Setting up r-cran-sys (3.4.3-1) ... 461s Setting up r-cran-withr (3.0.2+dfsg-1) ... 461s Setting up r-cran-mime (0.12-2) ... 461s Setting up r-cran-generics (0.1.3-1) ... 461s Setting up r-cran-base64enc (0.1-3-3) ... 461s Setting up r-cran-digest (0.6.37-1) ... 461s Setting up r-cran-ape (5.8-1-1) ... 461s Setting up r-cran-prettyunits (1.2.0-1) ... 461s Setting up r-cran-fansi (1.0.5-1) ... 461s Setting up r-cran-mass (7.3-64-1) ... 461s Setting up r-cran-glue (1.8.0-1) ... 461s Setting up gfortran-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 461s Setting up r-cran-xtable (1:1.8-4-2) ... 461s Setting up r-cran-cli (3.6.4-1) ... 461s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 461s Setting up gcc (4:14.2.0-1ubuntu1) ... 461s Setting up r-cran-askpass (1.2.1-1) ... 461s Setting up r-cran-fastmap (1.2.0-1) ... 461s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ... 461s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 461s Setting up r-cran-sp (1:2.2-0+dfsg-1) ... 461s Setting up r-cran-utf8 (1.2.4-1) ... 461s Setting up r-cran-colorspace (2.1-1+dfsg-1) ... 461s Setting up r-cran-stringi (1.8.4-1build1) ... 461s Setting up r-cran-cpp11 (0.5.2-1) ... 461s Setting up r-cran-segmented (2.1-4-1) ... 461s Setting up r-cran-plyr (1.8.9-1) ... 461s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 461s Setting up r-cran-isoband (0.2.7-1) ... 461s Setting up r-cran-gtable (0.3.6+dfsg-1) ... 461s Setting up r-cran-later (1.4.1+dfsg-1) ... 461s Setting up r-cran-matrix (1.7-3-1) ... 461s Setting up r-cran-htmltools (0.5.8.1-1) ... 461s Setting up r-cran-mgcv (1.9-1-1) ... 461s Setting up g++ (4:14.2.0-1ubuntu1) ... 461s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 461s Setting up r-cran-cachem (1.1.0-1) ... 461s Setting up r-cran-sass (0.4.9+dfsg-1) ... 461s Setting up build-essential (12.10ubuntu1) ... 461s Setting up r-cran-rcpparmadillo (14.2.3-1-1) ... 461s Setting up r-cran-vctrs (0.6.5-1) ... 461s Setting up r-cran-pillar (1.10.1+dfsg-1) ... 461s Setting up r-cran-openssl (2.3.2+dfsg-1) ... 461s Setting up r-cran-stringr (1.5.1-1) ... 461s Setting up r-cran-xml2 (1.3.7-1) ... 461s Setting up r-cran-munsell (0.5.1-1) ... 461s Setting up r-cran-tibble (3.2.1+dfsg-3) ... 461s Setting up r-cran-fontawesome (0.5.3-1) ... 461s Setting up r-cran-igraph (2.1.4-1) ... 461s Setting up r-cran-ade4 (1.7-23-1) ... 461s Setting up gfortran (4:14.2.0-1ubuntu1) ... 461s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 461s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 461s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 461s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 461s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 461s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... 461s Setting up r-cran-reshape2 (1.4.4-2build1) ... 461s Setting up r-cran-httr (1.4.7+dfsg-1) ... 461s Setting up r-cran-hms (1.1.3-1) ... 461s Setting up r-cran-scales (1.3.0-1) ... 461s Setting up r-cran-memoise (2.0.1-1) ... 461s Setting up r-cran-promises (1.3.2+dfsg-1) ... 461s Setting up r-cran-purrr (1.0.4-1) ... 461s Setting up r-cran-vegan (2.6-10+dfsg-1ubuntu2) ... 461s Setting up r-cran-dplyr (1.1.4-4) ... 461s Setting up r-cran-progress (1.2.3-1) ... 461s Setting up r-base-dev (4.4.3-1) ... 461s Setting up r-cran-rncl (0.8.7-1) ... 461s Setting up r-cran-seqinr (4.2-36-1) ... 461s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 461s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 461s Setting up r-cran-bslib (0.8.0+dfsg-1) ... 461s Setting up r-cran-tidyr (1.3.1-1) ... 461s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 461s Setting up r-cran-rnexml (2.4.11+ds-1) ... 461s Setting up r-cran-phylobase (0.8.12-1) ... 461s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 461s Setting up r-cran-adegenet (2.1.11-1) ... 461s Setting up r-cran-adephylo (1.1-16-1) ... 461s Processing triggers for libc-bin (2.41-1ubuntu2) ... 461s Processing triggers for man-db (2.13.0-1) ... 463s Processing triggers for install-info (7.1.1-1) ... 465s autopkgtest [22:09:43]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 465s autopkgtest [22:09:43]: test pkg-r-autopkgtest: [----------------------- 465s Test: Try to load the R library adephylo 465s 465s R version 4.4.3 (2025-02-28) -- "Trophy Case" 465s Copyright (C) 2025 The R Foundation for Statistical Computing 465s Platform: x86_64-pc-linux-gnu 465s 465s R is free software and comes with ABSOLUTELY NO WARRANTY. 465s You are welcome to redistribute it under certain conditions. 465s Type 'license()' or 'licence()' for distribution details. 465s 465s R is a collaborative project with many contributors. 465s Type 'contributors()' for more information and 465s 'citation()' on how to cite R or R packages in publications. 465s 465s Type 'demo()' for some demos, 'help()' for on-line help, or 465s 'help.start()' for an HTML browser interface to help. 465s Type 'q()' to quit R. 465s 465s > library('adephylo') 465s Loading required package: ade4 468s > 468s > 468s Other tests are currently unsupported! 468s They will be progressively added. 468s autopkgtest [22:09:46]: test pkg-r-autopkgtest: -----------------------] 468s autopkgtest [22:09:46]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 468s pkg-r-autopkgtest PASS 469s autopkgtest [22:09:47]: @@@@@@@@@@@@@@@@@@@@ summary 469s run-unit-test PASS 469s pkg-r-autopkgtest PASS 473s nova [W] Skipping flock for amd64 473s Creating nova instance adt-plucky-amd64-r-cran-adephylo-20250315-220158-juju-7f2275-prod-proposed-migration-environment-20-66288ec7-070a-4826-9d49-84adae4a1b25 from image adt/ubuntu-plucky-amd64-server-20250304.img (UUID 9c7d4da5-d95f-4c85-ac1f-51eb37e75c4c)... 473s nova [W] Timed out waiting for 21d60d6e-de77-4722-9f96-54a38097d35d to get deleted. 473s nova [W] Skipping flock for amd64 473s Creating nova instance adt-plucky-amd64-r-cran-adephylo-20250315-220158-juju-7f2275-prod-proposed-migration-environment-20-66288ec7-070a-4826-9d49-84adae4a1b25 from image adt/ubuntu-plucky-amd64-server-20250304.img (UUID 9c7d4da5-d95f-4c85-ac1f-51eb37e75c4c)... 473s nova [W] Timed out waiting for 907c3347-24dc-4f4f-96bd-a91db1d4f293 to get deleted.