0s autopkgtest [21:59:34]: starting date and time: 2025-03-15 21:59:34+0000 0s autopkgtest [21:59:34]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [21:59:34]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.heaxxlun/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-bioc-monocle --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-23.secgroup --name adt-plucky-amd64-r-bioc-monocle-20250315-215933-juju-7f2275-prod-proposed-migration-environment-15-bcae2fb0-630e-419e-bd46-caea504b32ac --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 48s autopkgtest [22:00:22]: testbed dpkg architecture: amd64 48s autopkgtest [22:00:22]: testbed apt version: 2.9.31ubuntu1 49s autopkgtest [22:00:23]: @@@@@@@@@@@@@@@@@@@@ test bed setup 49s autopkgtest [22:00:23]: testbed release detected to be: None 50s autopkgtest [22:00:24]: updating testbed package index (apt update) 50s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 50s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 50s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 51s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 51s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [369 kB] 51s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [44.1 kB] 51s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [14.5 kB] 51s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [67.4 kB] 51s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [85.7 kB] 51s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 c-n-f Metadata [1852 B] 51s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 c-n-f Metadata [116 B] 51s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [174 kB] 51s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [342 kB] 51s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 c-n-f Metadata [15.3 kB] 51s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [8544 B] 51s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [16.1 kB] 51s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 c-n-f Metadata [628 B] 51s Fetched 1265 kB in 1s (1340 kB/s) 52s Reading package lists... 53s + lsb_release --codename --short 53s + RELEASE=plucky 53s + cat 53s + [ plucky != trusty ] 53s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 53s Reading package lists... 53s Building dependency tree... 53s Reading state information... 53s Calculating upgrade... 53s Calculating upgrade... 54s The following package was automatically installed and is no longer required: 54s libnl-genl-3-200 54s Use 'sudo apt autoremove' to remove it. 54s The following NEW packages will be installed: 54s bpftool libdebuginfod-common libdebuginfod1t64 linux-headers-6.14.0-10 54s linux-headers-6.14.0-10-generic linux-image-6.14.0-10-generic 54s linux-modules-6.14.0-10-generic linux-modules-extra-6.14.0-10-generic 54s linux-perf linux-tools-6.14.0-10 linux-tools-6.14.0-10-generic pnp.ids 54s The following packages will be upgraded: 54s apparmor apt apt-utils binutils binutils-common binutils-x86-64-linux-gnu 54s cloud-init cloud-init-base curl dosfstools exfatprogs fwupd gcc-15-base 54s gir1.2-girepository-2.0 gir1.2-glib-2.0 htop hwdata initramfs-tools 54s initramfs-tools-bin initramfs-tools-core libapparmor1 libapt-pkg7.0 54s libassuan9 libatomic1 libaudit-common libaudit1 libbinutils libbrotli1 54s libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libctf-nobfd0 libctf0 54s libcurl3t64-gnutls libcurl4t64 libestr0 libftdi1-2 libfwupd3 libgcc-s1 54s libgirepository-1.0-1 libglib2.0-0t64 libglib2.0-data libgpgme11t64 54s libgprofng0 libjemalloc2 liblz4-1 liblzma5 libmm-glib0 libncurses6 54s libncursesw6 libnewt0.52 libnl-3-200 libnl-genl-3-200 libnl-route-3-200 54s libnss-systemd libpam-systemd libparted2t64 libpci3 libpython3-stdlib 54s libpython3.13 libpython3.13-minimal libpython3.13-stdlib libseccomp2 54s libselinux1 libsemanage-common libsemanage2 libsframe1 libsqlite3-0 54s libstdc++6 libsystemd-shared libsystemd0 libtinfo6 libudev1 libxml2 54s linux-firmware linux-generic linux-headers-generic linux-headers-virtual 54s linux-image-generic linux-image-virtual linux-libc-dev linux-tools-common 54s linux-virtual locales media-types ncurses-base ncurses-bin ncurses-term 54s parted pci.ids pciutils pinentry-curses python-apt-common python3 54s python3-apt python3-bcrypt python3-cffi-backend python3-dbus python3-gi 54s python3-jinja2 python3-lazr.uri python3-markupsafe python3-minimal 54s python3-newt python3-rpds-py python3-systemd python3-yaml python3.13 54s python3.13-gdbm python3.13-minimal rsync rsyslog strace systemd 54s systemd-cryptsetup systemd-resolved systemd-sysv systemd-timesyncd 54s ubuntu-kernel-accessories ubuntu-minimal ubuntu-standard udev whiptail 54s xz-utils 54s 126 upgraded, 12 newly installed, 0 to remove and 0 not upgraded. 54s Need to get 829 MB of archives. 54s After this operation, 325 MB of additional disk space will be used. 54s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-bin amd64 6.5+20250216-2 [194 kB] 54s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-dev-bin amd64 2.41-1ubuntu1 [24.7 kB] 54s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6-dev amd64 2.41-1ubuntu1 [2182 kB] 54s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 locales all 2.41-1ubuntu1 [4246 kB] 55s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6 amd64 2.41-1ubuntu1 [3327 kB] 55s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-bin amd64 2.41-1ubuntu1 [701 kB] 55s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-libc-dev amd64 6.14.0-10.10 [1723 kB] 55s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libatomic1 amd64 15-20250222-0ubuntu1 [10.4 kB] 55s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-15-base amd64 15-20250222-0ubuntu1 [53.4 kB] 55s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-s1 amd64 15-20250222-0ubuntu1 [77.8 kB] 55s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++6 amd64 15-20250222-0ubuntu1 [798 kB] 55s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-base all 6.5+20250216-2 [25.9 kB] 55s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-term all 6.5+20250216-2 [276 kB] 55s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 liblz4-1 amd64 1.10.0-4 [66.4 kB] 55s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma5 amd64 5.6.4-1 [157 kB] 55s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd0 amd64 257.3-1ubuntu3 [595 kB] 55s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libnss-systemd amd64 257.3-1ubuntu3 [199 kB] 55s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-sysv amd64 257.3-1ubuntu3 [11.9 kB] 55s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-resolved amd64 257.3-1ubuntu3 [345 kB] 55s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-systemd amd64 257.3-1ubuntu3 [302 kB] 55s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd-shared amd64 257.3-1ubuntu3 [2371 kB] 55s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd amd64 257.3-1ubuntu3 [3052 kB] 55s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-timesyncd amd64 257.3-1ubuntu3 [42.1 kB] 55s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-cryptsetup amd64 257.3-1ubuntu3 [124 kB] 55s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 udev amd64 257.3-1ubuntu3 [1404 kB] 55s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libudev1 amd64 257.3-1ubuntu3 [215 kB] 55s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit-common all 1:4.0.2-2ubuntu2 [6628 B] 55s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libcap-ng0 amd64 0.8.5-4build1 [15.6 kB] 55s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit1 amd64 1:4.0.2-2ubuntu2 [54.0 kB] 55s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libseccomp2 amd64 2.5.5-1ubuntu6 [53.5 kB] 55s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libselinux1 amd64 3.7-3ubuntu3 [87.3 kB] 55s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libapparmor1 amd64 4.1.0~beta5-0ubuntu8 [55.0 kB] 55s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libapt-pkg7.0 amd64 2.9.33 [1138 kB] 55s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 apt amd64 2.9.33 [1439 kB] 55s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 apt-utils amd64 2.9.33 [222 kB] 55s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-minimal amd64 3.13.2-2 [27.7 kB] 55s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 python3 amd64 3.13.2-2 [24.0 kB] 55s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13 amd64 3.13.2-2 [2341 kB] 56s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 media-types all 13.0.0 [29.9 kB] 56s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses6 amd64 6.5+20250216-2 [126 kB] 56s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libncursesw6 amd64 6.5+20250216-2 [165 kB] 56s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libtinfo6 amd64 6.5+20250216-2 [119 kB] 56s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libsqlite3-0 amd64 3.46.1-2 [715 kB] 56s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.2-2 [735 kB] 56s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.2-2 [2365 kB] 56s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.2-2 [883 kB] 56s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.2-2 [2066 kB] 56s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.4 kB] 56s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 rsync amd64 3.4.1+ds1-3 [482 kB] 56s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod-common all 0.192-4 [15.4 kB] 56s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage-common all 3.7-2.1build1 [7268 B] 56s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage2 amd64 3.7-2.1build1 [106 kB] 56s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libassuan9 amd64 3.0.2-2 [43.1 kB] 56s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-girepository-2.0 amd64 1.83.4-1 [25.3 kB] 56s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-glib-2.0 amd64 2.84.0-1 [184 kB] 56s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-0t64 amd64 2.84.0-1 [1669 kB] 56s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libgirepository-1.0-1 amd64 1.83.4-1 [89.5 kB] 56s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libestr0 amd64 0.1.11-2 [8340 B] 56s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-data all 2.84.0-1 [53.0 kB] 56s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-newt amd64 0.52.24-4ubuntu2 [21.1 kB] 56s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libnewt0.52 amd64 0.52.24-4ubuntu2 [55.7 kB] 56s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2ubuntu5 [772 kB] 56s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 python-apt-common all 2.9.9build1 [21.3 kB] 56s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-apt amd64 2.9.9build1 [172 kB] 56s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-cffi-backend amd64 1.17.1-2build2 [96.6 kB] 56s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dbus amd64 1.3.2-5build5 [102 kB] 56s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-4build1 [252 kB] 56s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-yaml amd64 6.0.2-1build2 [144 kB] 56s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 rsyslog amd64 8.2412.0-2ubuntu2 [555 kB] 56s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 whiptail amd64 0.52.24-4ubuntu2 [19.1 kB] 56s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-minimal amd64 1.549 [11.5 kB] 56s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 apparmor amd64 4.1.0~beta5-0ubuntu8 [701 kB] 56s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 dosfstools amd64 4.2-1.2 [95.0 kB] 56s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-genl-3-200 amd64 3.7.0-1 [12.2 kB] 56s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-route-3-200 amd64 3.7.0-1 [191 kB] 56s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-3-200 amd64 3.7.0-1 [64.9 kB] 56s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 parted amd64 3.6-5 [53.9 kB] 56s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libparted2t64 amd64 3.6-5 [158 kB] 56s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 pci.ids all 0.0~2025.03.09-1 [285 kB] 56s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 pciutils amd64 1:3.13.0-2 [110 kB] 56s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 libpci3 amd64 1:3.13.0-2 [39.8 kB] 56s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 strace amd64 6.13+ds-1ubuntu1 [622 kB] 56s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 xz-utils amd64 5.6.4-1 [278 kB] 56s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-standard amd64 1.549 [11.5 kB] 56s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libgprofng0 amd64 2.44-3ubuntu1 [886 kB] 56s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf0 amd64 2.44-3ubuntu1 [96.5 kB] 56s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf-nobfd0 amd64 2.44-3ubuntu1 [98.9 kB] 56s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-x86-64-linux-gnu amd64 2.44-3ubuntu1 [1108 kB] 56s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libbinutils amd64 2.44-3ubuntu1 [585 kB] 56s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils amd64 2.44-3ubuntu1 [208 kB] 56s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-common amd64 2.44-3ubuntu1 [215 kB] 56s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libsframe1 amd64 2.44-3ubuntu1 [14.8 kB] 56s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 hwdata all 0.393-3 [1562 B] 56s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 pnp.ids all 0.393-3 [29.5 kB] 56s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-common all 6.14.0-10.10 [295 kB] 56s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 bpftool amd64 7.6.0+6.14.0-10.10 [1147 kB] 56s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-markupsafe amd64 2.1.5-1build4 [13.4 kB] 56s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 56s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init-base all 25.1-0ubuntu3 [616 kB] 56s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libbrotli1 amd64 1.1.0-2build4 [365 kB] 56s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 curl amd64 8.12.1-3ubuntu1 [258 kB] 57s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4t64 amd64 8.12.1-3ubuntu1 [437 kB] 57s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 exfatprogs amd64 1.2.8-1 [76.3 kB] 57s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl3t64-gnutls amd64 8.12.1-3ubuntu1 [432 kB] 57s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 fwupd amd64 2.0.6-4 [5408 kB] 57s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libfwupd3 amd64 2.0.6-4 [136 kB] 57s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libmm-glib0 amd64 1.23.4-0ubuntu3 [251 kB] 58s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 htop amd64 3.4.0-2 [195 kB] 58s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-firmware amd64 20250310.git9e1370d3-0ubuntu1 [571 MB] 81s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools all 0.146ubuntu1 [7920 B] 81s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-core all 0.146ubuntu1 [51.9 kB] 81s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-bin amd64 0.146ubuntu1 [26.2 kB] 81s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod1t64 amd64 0.192-4 [21.0 kB] 81s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 libftdi1-2 amd64 1.5-8build1 [30.2 kB] 81s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libgpgme11t64 amd64 1.24.2-1ubuntu2 [155 kB] 81s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libjemalloc2 amd64 5.3.0-3 [277 kB] 81s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-6.14.0-10-generic amd64 6.14.0-10.10 [41.2 MB] 82s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-6.14.0-10-generic amd64 6.14.0-10.10 [15.3 MB] 82s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-extra-6.14.0-10-generic amd64 6.14.0-10.10 [120 MB] 87s Get:120 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-generic amd64 6.14.0-10.10 [1730 B] 87s Get:121 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-generic amd64 6.14.0-10.10 [11.1 kB] 87s Get:122 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-virtual amd64 6.14.0-10.10 [1722 B] 87s Get:123 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-virtual amd64 6.14.0-10.10 [11.1 kB] 87s Get:124 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-virtual amd64 6.14.0-10.10 [1642 B] 87s Get:125 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10 all 6.14.0-10.10 [14.2 MB] 87s Get:126 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10-generic amd64 6.14.0-10.10 [3915 kB] 87s Get:127 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-generic amd64 6.14.0-10.10 [11.0 kB] 87s Get:128 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-perf amd64 6.14.0-10.10 [4122 kB] 88s Get:129 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10 amd64 6.14.0-10.10 [1394 kB] 88s Get:130 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10-generic amd64 6.14.0-10.10 [830 B] 88s Get:131 http://ftpmaster.internal/ubuntu plucky/main amd64 pinentry-curses amd64 1.3.1-2ubuntu3 [42.3 kB] 88s Get:132 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lazr.uri all 1.0.6-6 [13.7 kB] 88s Get:133 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-rpds-py amd64 0.21.0-2ubuntu2 [278 kB] 88s Get:134 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-systemd amd64 235-1build6 [43.9 kB] 88s Get:135 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-gdbm amd64 3.13.2-2 [31.9 kB] 88s Get:136 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-kernel-accessories amd64 1.549 [11.2 kB] 88s Get:137 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init all 25.1-0ubuntu3 [2100 B] 88s Get:138 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-bcrypt amd64 4.2.0-2.1build1 [221 kB] 88s Preconfiguring packages ... 88s Fetched 829 MB in 34s (24.4 MB/s) 88s (Reading database ... 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over (0.21.0-2ubuntu1) ... 110s Preparing to unpack .../80-python3-systemd_235-1build6_amd64.deb ... 110s Unpacking python3-systemd (235-1build6) over (235-1build5) ... 110s Preparing to unpack .../81-python3.13-gdbm_3.13.2-2_amd64.deb ... 110s Unpacking python3.13-gdbm (3.13.2-2) over (3.13.2-1) ... 110s Preparing to unpack .../82-ubuntu-kernel-accessories_1.549_amd64.deb ... 110s Unpacking ubuntu-kernel-accessories (1.549) over (1.548) ... 110s Preparing to unpack .../83-cloud-init_25.1-0ubuntu3_all.deb ... 110s Unpacking cloud-init (25.1-0ubuntu3) over (25.1-0ubuntu2) ... 110s Preparing to unpack .../84-python3-bcrypt_4.2.0-2.1build1_amd64.deb ... 110s Unpacking python3-bcrypt (4.2.0-2.1build1) over (4.2.0-2.1) ... 110s Setting up linux-headers-6.14.0-10 (6.14.0-10.10) ... 110s Setting up media-types (13.0.0) ... 110s Installing new version of config file /etc/mime.types ... 110s Setting up linux-headers-6.14.0-10-generic (6.14.0-10.10) ... 110s Setting up ubuntu-kernel-accessories (1.549) ... 110s Setting up libapparmor1:amd64 (4.1.0~beta5-0ubuntu8) ... 110s Setting up pci.ids (0.0~2025.03.09-1) ... 110s Setting up libnewt0.52:amd64 (0.52.24-4ubuntu2) ... 110s Setting up apt-utils (2.9.33) ... 110s Setting up libdebuginfod-common (0.192-4) ... 110s Setting up exfatprogs (1.2.8-1) ... 110s Setting up linux-firmware (20250310.git9e1370d3-0ubuntu1) ... 110s Setting up bpftool (7.6.0+6.14.0-10.10) ... 110s Setting up libestr0:amd64 (0.1.11-2) ... 110s Setting up libbrotli1:amd64 (1.1.0-2build4) ... 110s Setting up libsqlite3-0:amd64 (3.46.1-2) ... 110s Setting up dosfstools (4.2-1.2) ... 110s Setting up rsyslog (8.2412.0-2ubuntu2) ... 110s info: The user `syslog' is already a member of `adm'. 111s Setting up binutils-common:amd64 (2.44-3ubuntu1) ... 111s Setting up libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) ... 111s Setting up linux-libc-dev:amd64 (6.14.0-10.10) ... 111s Setting up libctf-nobfd0:amd64 (2.44-3ubuntu1) ... 111s Setting up systemd (257.3-1ubuntu3) ... 111s /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring. 112s Created symlink '/run/systemd/system/tmp.mount' → '/dev/null'. 112s /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring. 112s Setting up libparted2t64:amd64 (3.6-5) ... 112s Removing 'diversion of /lib/x86_64-linux-gnu/libparted.so.2 to /lib/x86_64-linux-gnu/libparted.so.2.usr-is-merged by libparted2t64' 112s Removing 'diversion of /lib/x86_64-linux-gnu/libparted.so.2.0.5 to /lib/x86_64-linux-gnu/libparted.so.2.0.5.usr-is-merged by libparted2t64' 112s Setting up linux-headers-generic (6.14.0-10.10) ... 112s Setting up libjemalloc2:amd64 (5.3.0-3) ... 112s Setting up locales (2.41-1ubuntu1) ... 112s Installing new version of config file /etc/locale.alias ... 113s Generating locales (this might take a while)... 115s en_US.UTF-8... done 115s Generation complete. 115s Setting up libsframe1:amd64 (2.44-3ubuntu1) ... 115s Setting up libpython3.13-minimal:amd64 (3.13.2-2) ... 115s Setting up apparmor (4.1.0~beta5-0ubuntu8) ... 115s Installing new version of config file /etc/apparmor.d/fusermount3 ... 115s Installing new version of config file /etc/apparmor.d/lsusb ... 115s Installing new version of config file /etc/apparmor.d/openvpn ... 116s Reloading AppArmor profiles 117s Setting up libftdi1-2:amd64 (1.5-8build1) ... 117s Setting up libglib2.0-data (2.84.0-1) ... 117s Setting up systemd-cryptsetup (257.3-1ubuntu3) ... 117s Setting up libncurses6:amd64 (6.5+20250216-2) ... 117s Setting up strace (6.13+ds-1ubuntu1) ... 117s Setting up xz-utils (5.6.4-1) ... 117s Setting up systemd-timesyncd (257.3-1ubuntu3) ... 118s systemd-time-wait-sync.service is a disabled or a static unit not running, not starting it. 118s Setting up libatomic1:amd64 (15-20250222-0ubuntu1) ... 118s Setting up udev (257.3-1ubuntu3) ... 119s Setting up linux-modules-6.14.0-10-generic (6.14.0-10.10) ... 120s Setting up libncursesw6:amd64 (6.5+20250216-2) ... 120s Setting up libpci3:amd64 (1:3.13.0-2) ... 120s Setting up whiptail (0.52.24-4ubuntu2) ... 120s Setting up python-apt-common (2.9.9build1) ... 120s Setting up pnp.ids (0.393-3) ... 120s Setting up libnl-3-200:amd64 (3.7.0-1) ... 121s Setting up python3.13-minimal (3.13.2-2) ... 121s Setting up libgpgme11t64:amd64 (1.24.2-1ubuntu2) ... 121s Setting up libbinutils:amd64 (2.44-3ubuntu1) ... 121s Setting up libc-dev-bin (2.41-1ubuntu1) ... 121s Setting up libpython3.13-stdlib:amd64 (3.13.2-2) ... 121s Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2ubuntu5) ... 121s Setting up rsync (3.4.1+ds1-3) ... 122s rsync.service is a disabled or a static unit not running, not starting it. 122s Setting up python3.13-gdbm (3.13.2-2) ... 122s Setting up libpython3-stdlib:amd64 (3.13.2-2) ... 122s Setting up systemd-resolved (257.3-1ubuntu3) ... 122s Setting up initramfs-tools-bin (0.146ubuntu1) ... 122s Setting up ncurses-term (6.5+20250216-2) ... 122s Setting up libctf0:amd64 (2.44-3ubuntu1) ... 122s Setting up libpython3.13:amd64 (3.13.2-2) ... 122s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 122s Setting up libdebuginfod1t64:amd64 (0.192-4) ... 122s Setting up systemd-sysv (257.3-1ubuntu3) ... 122s Setting up linux-headers-virtual (6.14.0-10.10) ... 122s Setting up libcurl4t64:amd64 (8.12.1-3ubuntu1) ... 122s Setting up python3.13 (3.13.2-2) ... 123s Setting up htop (3.4.0-2) ... 123s Setting up linux-image-6.14.0-10-generic (6.14.0-10.10) ... 125s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.12.0-16-generic 125s I: /boot/initrd.img.old is now a symlink to initrd.img-6.12.0-16-generic 125s I: /boot/vmlinuz is now a symlink to vmlinuz-6.14.0-10-generic 125s I: /boot/initrd.img is now a symlink to initrd.img-6.14.0-10-generic 125s Setting up parted (3.6-5) ... 125s Setting up libnss-systemd:amd64 (257.3-1ubuntu3) ... 125s Setting up python3 (3.13.2-2) ... 125s Setting up python3-newt:amd64 (0.52.24-4ubuntu2) ... 126s Setting up python3-markupsafe (2.1.5-1build4) ... 126s Setting up linux-modules-extra-6.14.0-10-generic (6.14.0-10.10) ... 128s Setting up libnl-route-3-200:amd64 (3.7.0-1) ... 128s Setting up hwdata (0.393-3) ... 128s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 128s Setting up libglib2.0-0t64:amd64 (2.84.0-1) ... 128s No schema files found: doing nothing. 128s Setting up libgprofng0:amd64 (2.44-3ubuntu1) ... 128s Setting up linux-perf (6.14.0-10.10) ... 128s Setting up gir1.2-glib-2.0:amd64 (2.84.0-1) ... 128s Setting up pciutils (1:3.13.0-2) ... 128s Setting up python3-rpds-py (0.21.0-2ubuntu2) ... 128s Setting up libmm-glib0:amd64 (1.23.4-0ubuntu3) ... 128s Setting up libnl-genl-3-200:amd64 (3.7.0-1) ... 128s Setting up libpam-systemd:amd64 (257.3-1ubuntu3) ... 128s Setting up libc6-dev:amd64 (2.41-1ubuntu1) ... 128s Setting up libgirepository-1.0-1:amd64 (1.83.4-1) ... 128s Setting up curl (8.12.1-3ubuntu1) ... 128s Setting up linux-image-virtual (6.14.0-10.10) ... 128s Setting up initramfs-tools-core (0.146ubuntu1) ... 128s Setting up linux-tools-common (6.14.0-10.10) ... 128s Setting up python3-systemd (235-1build6) ... 128s Setting up python3-cffi-backend:amd64 (1.17.1-2build2) ... 128s Setting up binutils-x86-64-linux-gnu (2.44-3ubuntu1) ... 128s Setting up linux-image-generic (6.14.0-10.10) ... 128s Setting up python3-dbus (1.3.2-5build5) ... 129s Setting up linux-tools-6.14.0-10 (6.14.0-10.10) ... 129s Setting up initramfs-tools (0.146ubuntu1) ... 129s Installing new version of config file /etc/kernel/postinst.d/initramfs-tools ... 129s Installing new version of config file /etc/kernel/postrm.d/initramfs-tools ... 129s update-initramfs: deferring update (trigger activated) 129s Setting up linux-generic (6.14.0-10.10) ... 129s Setting up ubuntu-minimal (1.549) ... 129s Setting up python3-apt (2.9.9build1) ... 129s Setting up python3-bcrypt (4.2.0-2.1build1) ... 129s Setting up python3-yaml (6.0.2-1build2) ... 129s Setting up libfwupd3:amd64 (2.0.6-4) ... 129s Setting up python3-lazr.uri (1.0.6-6) ... 129s Setting up binutils (2.44-3ubuntu1) ... 129s Setting up ubuntu-standard (1.549) ... 129s Setting up cloud-init-base (25.1-0ubuntu3) ... 131s Setting up linux-virtual (6.14.0-10.10) ... 131s Setting up gir1.2-girepository-2.0:amd64 (1.83.4-1) ... 131s Setting up python3-gi (3.50.0-4build1) ... 131s Setting up linux-tools-6.14.0-10-generic (6.14.0-10.10) ... 131s Setting up fwupd (2.0.6-4) ... 131s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 131s fwupd.service is a disabled or a static unit not running, not starting it. 131s Setting up cloud-init (25.1-0ubuntu3) ... 131s Processing triggers for man-db (2.13.0-1) ... 133s Processing triggers for dbus (1.16.2-1ubuntu1) ... 133s Processing triggers for shared-mime-info (2.4-5) ... 133s Warning: program compiled against libxml 212 using older 209 133s Processing triggers for libc-bin (2.41-1ubuntu1) ... 133s Processing triggers for linux-image-6.14.0-10-generic (6.14.0-10.10) ... 133s /etc/kernel/postinst.d/initramfs-tools: 133s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 133s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 143s /etc/kernel/postinst.d/zz-update-grub: 143s Sourcing file `/etc/default/grub' 143s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 143s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 143s Generating grub configuration file ... 143s Found linux image: /boot/vmlinuz-6.14.0-10-generic 143s Found initrd image: /boot/initrd.img-6.14.0-10-generic 144s Found linux image: /boot/vmlinuz-6.12.0-16-generic 144s Found initrd image: /boot/initrd.img-6.12.0-16-generic 144s Found linux image: /boot/vmlinuz-6.11.0-8-generic 144s Found initrd image: /boot/initrd.img-6.11.0-8-generic 144s Warning: os-prober will not be executed to detect other bootable partitions. 144s Systems on them will not be added to the GRUB boot configuration. 144s Check GRUB_DISABLE_OS_PROBER documentation entry. 144s Adding boot menu entry for UEFI Firmware Settings ... 144s done 144s Processing triggers for initramfs-tools (0.146ubuntu1) ... 144s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 144s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 154s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 154s + /usr/lib/apt/apt-helper analyze-pattern ?true 154s + uname+ sed s/\./\\./g 154s -r 154s + running_kernel_pattern=^linux-.*6\.12\.0-16-generic.* 154s + apt list ?obsolete 154s + tail -n+2 154s + cut -d/ -f1 154s + grep -v ^linux-.*6\.12\.0-16-generic.* 155s + obsolete_pkgs=linux-headers-6.11.0-8-generic 155s linux-headers-6.11.0-8 155s linux-headers-6.12.0-16 155s linux-image-6.11.0-8-generic 155s linux-modules-6.11.0-8-generic 155s linux-tools-6.11.0-8-generic 155s linux-tools-6.11.0-8 155s linux-tools-6.12.0-16 155s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove linux-headers-6.11.0-8-generic linux-headers-6.11.0-8 linux-headers-6.12.0-16 linux-image-6.11.0-8-generic linux-modules-6.11.0-8-generic linux-tools-6.11.0-8-generic linux-tools-6.11.0-8 linux-tools-6.12.0-16 156s Reading package lists... 156s Building dependency tree... 156s Reading state information... 156s Solving dependencies... 156s The following packages will be REMOVED: 156s libnl-genl-3-200* libnsl2* libpython3.12-minimal* libpython3.12-stdlib* 156s libpython3.12t64* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 156s linux-headers-6.12.0-16* linux-headers-6.12.0-16-generic* 156s linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic* 156s linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic* linux-tools-6.12.0-16* 156s linux-tools-6.12.0-16-generic* 156s 0 upgraded, 0 newly installed, 15 to remove and 5 not upgraded. 156s After this operation, 371 MB disk space will be freed. 156s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 148643 files and directories currently installed.) 156s Removing libnl-genl-3-200:amd64 (3.7.0-1) ... 157s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 157s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 157s Removing libpython3.12t64:amd64 (3.12.9-1) ... 157s Removing libpython3.12-stdlib:amd64 (3.12.9-1) ... 157s Removing libnsl2:amd64 (1.3.0-3build3) ... 157s Removing libpython3.12-minimal:amd64 (3.12.9-1) ... 157s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 157s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 159s Removing linux-headers-6.12.0-16-generic (6.12.0-16.16) ... 160s Removing linux-headers-6.12.0-16 (6.12.0-16.16) ... 162s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 162s /etc/kernel/postrm.d/initramfs-tools: 162s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 162s /etc/kernel/postrm.d/zz-update-grub: 162s Sourcing file `/etc/default/grub' 162s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 162s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 162s Generating grub configuration file ... 162s Found linux image: /boot/vmlinuz-6.14.0-10-generic 162s Found initrd image: /boot/initrd.img-6.14.0-10-generic 163s Found linux image: /boot/vmlinuz-6.12.0-16-generic 163s Found initrd image: /boot/initrd.img-6.12.0-16-generic 163s Warning: os-prober will not be executed to detect other bootable partitions. 163s Systems on them will not be added to the GRUB boot configuration. 163s Check GRUB_DISABLE_OS_PROBER documentation entry. 163s Adding boot menu entry for UEFI Firmware Settings ... 163s done 163s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 163s Removing linux-tools-6.12.0-16-generic (6.12.0-16.16) ... 163s Removing linux-tools-6.12.0-16 (6.12.0-16.16) ... 163s Processing triggers for libc-bin (2.41-1ubuntu1) ... 163s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84830 files and directories currently installed.) 163s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 163s Purging configuration files for libpython3.12-minimal:amd64 (3.12.9-1) ... 163s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 163s + grep -q trusty /etc/lsb-release 163s + [ ! -d /usr/share/doc/unattended-upgrades ] 163s + [ ! -d /usr/share/doc/lxd ] 163s + [ ! -d /usr/share/doc/lxd-client ] 163s + [ ! -d /usr/share/doc/snapd ] 163s + type iptables 163s + cat 163s + chmod 755 /etc/rc.local 163s + . /etc/rc.local 163s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 163s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 163s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 163s + uname -m 163s + [ x86_64 = ppc64le ] 163s + [ -d /run/systemd/system ] 163s + systemd-detect-virt --quiet --vm 163s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 163s + cat 163s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 163s + echo COMPRESS=lz4 163s autopkgtest [22:02:17]: upgrading testbed (apt dist-upgrade and autopurge) 164s Reading package lists... 164s Building dependency tree... 164s Reading state information... 164s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 164s Starting 2 pkgProblemResolver with broken count: 0 164s Done 165s Entering ResolveByKeep 165s 165s Calculating upgrade... 165s The following packages will be upgraded: 165s libc-bin libc-dev-bin libc6 libc6-dev locales 165s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 165s Need to get 10.5 MB of archives. 165s After this operation, 1024 B of additional disk space will be used. 165s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6-dev amd64 2.41-1ubuntu2 [2183 kB] 166s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-dev-bin amd64 2.41-1ubuntu2 [24.7 kB] 166s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6 amd64 2.41-1ubuntu2 [3327 kB] 166s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-bin amd64 2.41-1ubuntu2 [700 kB] 166s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 locales all 2.41-1ubuntu2 [4246 kB] 167s Preconfiguring packages ... 167s Fetched 10.5 MB in 1s (8428 kB/s) 167s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84827 files and directories currently installed.) 167s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_amd64.deb ... 167s Unpacking libc6-dev:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 167s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_amd64.deb ... 167s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 167s Preparing to unpack .../libc6_2.41-1ubuntu2_amd64.deb ... 167s Unpacking libc6:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 167s Setting up libc6:amd64 (2.41-1ubuntu2) ... 168s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84827 files and directories currently installed.) 168s Preparing to unpack .../libc-bin_2.41-1ubuntu2_amd64.deb ... 168s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 168s Setting up libc-bin (2.41-1ubuntu2) ... 168s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84827 files and directories currently installed.) 168s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 168s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 168s Setting up locales (2.41-1ubuntu2) ... 169s Generating locales (this might take a while)... 170s en_US.UTF-8... done 170s Generation complete. 170s Setting up libc-dev-bin (2.41-1ubuntu2) ... 170s Setting up libc6-dev:amd64 (2.41-1ubuntu2) ... 170s Processing triggers for man-db (2.13.0-1) ... 171s Processing triggers for systemd (257.3-1ubuntu3) ... 172s Reading package lists... 172s Building dependency tree... 172s Reading state information... 172s Starting pkgProblemResolver with broken count: 0 172s Starting 2 pkgProblemResolver with broken count: 0 172s Done 172s Solving dependencies... 172s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 173s autopkgtest [22:02:27]: rebooting testbed after setup commands that affected boot 196s autopkgtest [22:02:50]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 16:07:00 UTC 2025 198s autopkgtest [22:02:52]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-monocle 201s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-monocle 2.34.0-2 (dsc) [2543 B] 201s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-monocle 2.34.0-2 (tar) [9464 kB] 201s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-monocle 2.34.0-2 (diff) [6160 B] 201s gpgv: Signature made Sun Jan 12 14:13:58 2025 UTC 201s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 201s gpgv: issuer "crusoe@debian.org" 201s gpgv: Can't check signature: No public key 201s dpkg-source: warning: cannot verify inline signature for ./r-bioc-monocle_2.34.0-2.dsc: no acceptable signature found 201s autopkgtest [22:02:55]: testing package r-bioc-monocle version 2.34.0-2 202s autopkgtest [22:02:56]: build not needed 205s autopkgtest [22:02:59]: test pkg-r-autopkgtest: preparing testbed 205s Reading package lists... 205s Building dependency tree... 205s Reading state information... 206s Starting pkgProblemResolver with broken count: 0 206s Starting 2 pkgProblemResolver with broken count: 0 206s Done 206s The following NEW packages will be installed: 206s build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu 206s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 206s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-14 206s g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 206s gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-14 206s gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools 206s javascript-common libamd3 libasan8 libblas-dev libblas3 libboost-dev 206s libboost1.83-dev libbz2-dev libcairo2 libcc1-0 libcolamd3 libdatrie1 206s libdeflate-dev libdeflate0 libfontconfig1 libgcc-14-dev libgfortran-14-dev 206s libgfortran5 libglpk40 libgomp1 libgraphite2-3 libharfbuzz0b libhnswlib-dev 206s libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev 206s libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap 206s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 206s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 206s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 206s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 206s liblapack-dev liblapack3 liblerc4 liblsan0 libltdl7 liblua5.4-0 liblzma-dev 206s libmpc3 libncurses-dev libnlopt0 libpango-1.0-0 libpangocairo-1.0-0 206s libpangoft2-1.0-0 libpaper-utils libpaper2 libpcre2-16-0 libpcre2-32-0 206s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 206s libquadmath0 libreadline-dev libsharpyuv0 libsm6 libstdc++-14-dev 206s libsuitesparseconfig7 libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-dev 206s libtk8.6 libtsan2 libubsan1 libwebp7 libxcb-render0 libxcb-shm0 libxft2 206s libxrender1 libxss1 libxt6t64 littler node-bootstrap-sass node-html5shiv 206s node-normalize.css pandoc pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin 206s r-base-core r-base-dev r-bioc-assorthead r-bioc-beachmat r-bioc-biobase 206s r-bioc-biocgenerics r-bioc-biocneighbors r-bioc-biocparallel 206s r-bioc-biocsingular r-bioc-biocviews r-bioc-delayedarray r-bioc-destiny 206s r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicranges 206s r-bioc-graph r-bioc-hsmmsinglecell r-bioc-iranges r-bioc-limma 206s r-bioc-matrixgenerics r-bioc-monocle r-bioc-pcamethods r-bioc-rbgl 206s r-bioc-s4arrays r-bioc-s4vectors r-bioc-scaledmatrix r-bioc-scater 206s r-bioc-scuttle r-bioc-singlecellexperiment r-bioc-sparsearray 206s r-bioc-summarizedexperiment r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc 206s r-cran-abind r-cran-acepack r-cran-askpass r-cran-backports r-cran-base64enc 206s r-cran-beeswarm r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 206s r-cran-bitops r-cran-boot r-cran-brio r-cran-broom r-cran-bslib 206s r-cran-cachem r-cran-cairo r-cran-callr r-cran-car r-cran-cardata 206s r-cran-caret r-cran-catools r-cran-cellranger r-cran-checkmate r-cran-chron 206s r-cran-class r-cran-cli r-cran-clipr r-cran-clock r-cran-cluster 206s r-cran-codetools r-cran-colorspace r-cran-colourpicker r-cran-combinat 206s r-cran-commonmark r-cran-conquer r-cran-cowplot r-cran-cpp11 r-cran-crayon 206s r-cran-crosstalk r-cran-curl r-cran-data.table r-cran-ddrtree r-cran-deldir 206s r-cran-deoptimr r-cran-deriv r-cran-desc r-cran-diagram r-cran-diffobj 206s r-cran-digest r-cran-doby r-cran-dotcall64 r-cran-dplyr r-cran-dqrng 206s r-cran-e1071 r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver 206s r-cran-fastdummies r-cran-fastica r-cran-fastmap r-cran-fitdistrplus 206s r-cran-fnn r-cran-fontawesome r-cran-forcats r-cran-foreach r-cran-foreign 206s r-cran-formatr r-cran-formula r-cran-fs r-cran-futile.logger 206s r-cran-futile.options r-cran-future r-cran-future.apply r-cran-gdata 206s r-cran-generics r-cran-ggbeeswarm r-cran-ggplot.multistats r-cran-ggplot2 206s r-cran-ggrastr r-cran-ggrepel r-cran-ggridges r-cran-ggthemes r-cran-globals 206s r-cran-glue r-cran-goftest r-cran-gower r-cran-gplots r-cran-gridextra 206s r-cran-gtable r-cran-gtools r-cran-hardhat r-cran-haven r-cran-here 206s r-cran-hexbin r-cran-highr r-cran-hmisc r-cran-hms r-cran-htmltable 206s r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-ica 206s r-cran-igraph r-cran-interp r-cran-ipred r-cran-irlba r-cran-isoband 206s r-cran-iterators r-cran-jpeg r-cran-jquerylib r-cran-jsonlite 206s r-cran-kernsmooth r-cran-knitr r-cran-knn.covertree r-cran-labeling 206s r-cran-laeken r-cran-lambda.r r-cran-later r-cran-lattice 206s r-cran-latticeextra r-cran-lava r-cran-lazyeval r-cran-leidenbase 206s r-cran-lifecycle r-cran-listenv r-cran-littler r-cran-lme4 r-cran-lmtest 206s r-cran-lubridate r-cran-magrittr r-cran-mass r-cran-matrix 206s r-cran-matrixmodels r-cran-matrixstats r-cran-memoise r-cran-mgcv 206s r-cran-microbenchmark r-cran-mime r-cran-miniui r-cran-minqa 206s r-cran-modelmetrics r-cran-modelr r-cran-munsell r-cran-nlme r-cran-nloptr 206s r-cran-nnet r-cran-numderiv r-cran-openssl r-cran-openxlsx r-cran-parallelly 206s r-cran-patchwork r-cran-pbapply r-cran-pbkrtest r-cran-pheatmap 206s r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 206s r-cran-pkgload r-cran-plotly r-cran-plyr r-cran-png r-cran-polyclip 206s r-cran-praise r-cran-prettyunits r-cran-proc r-cran-processx r-cran-prodlim 206s r-cran-progress r-cran-progressr r-cran-promises r-cran-proxy r-cran-ps 206s r-cran-purrr r-cran-quantreg r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils 206s r-cran-r6 r-cran-ragg r-cran-ranger r-cran-rann r-cran-rappdirs 206s r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppannoy 206s r-cran-rcpparmadillo r-cran-rcppeigen r-cran-rcpphnsw r-cran-rcppml 206s r-cran-rcppprogress r-cran-rcpptoml r-cran-rcurl r-cran-rdpack r-cran-readr 206s r-cran-readxl r-cran-recipes r-cran-reformulas r-cran-rematch 206s r-cran-reshape2 r-cran-reticulate r-cran-rio r-cran-rlang r-cran-rmarkdown 206s r-cran-robustbase r-cran-rocr r-cran-rpart r-cran-rprojroot r-cran-rspectra 206s r-cran-rstudioapi r-cran-rsvd r-cran-rtsne r-cran-runit r-cran-sass 206s r-cran-scales r-cran-scattermore r-cran-scatterplot3d r-cran-sctransform 206s r-cran-seurat r-cran-seuratobject r-cran-shape r-cran-shiny r-cran-shinyjs 206s r-cran-sitmo r-cran-slam r-cran-smoother r-cran-snow r-cran-sourcetools 206s r-cran-sp r-cran-spam r-cran-sparsem r-cran-spatstat.data 206s r-cran-spatstat.explore r-cran-spatstat.geom r-cran-spatstat.random 206s r-cran-spatstat.sparse r-cran-spatstat.univar r-cran-spatstat.utils 206s r-cran-squarem r-cran-statmod r-cran-stringi r-cran-stringr r-cran-survival 206s r-cran-sys r-cran-systemfonts r-cran-tensor r-cran-testthat 206s r-cran-textshaping r-cran-tibble r-cran-tidyr r-cran-tidyselect 206s r-cran-timechange r-cran-timedate r-cran-tinytex r-cran-ttr r-cran-tzdb 206s r-cran-utf8 r-cran-uwot r-cran-vcd r-cran-vctrs r-cran-vgam r-cran-vim 206s r-cran-vipor r-cran-viridis r-cran-viridislite r-cran-vroom r-cran-waldo 206s r-cran-withr r-cran-writexl r-cran-xfun r-cran-xml r-cran-xtable r-cran-xts 206s r-cran-yaml r-cran-zip r-cran-zoo unzip x11-common xdg-utils zip zlib1g-dev 206s 0 upgraded, 448 newly installed, 0 to remove and 0 not upgraded. 206s Need to get 491 MB of archives. 206s After this operation, 1376 MB of additional disk space will be used. 206s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 207s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 207s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [11.9 MB] 207s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-17ubuntu3 [1030 B] 207s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [5586 B] 207s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.2.0-1ubuntu1 [22.4 kB] 207s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 15-20250222-0ubuntu1 [47.0 kB] 207s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 15-20250222-0ubuntu1 [148 kB] 207s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 15-20250222-0ubuntu1 [28.6 kB] 207s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 15-20250222-0ubuntu1 [3055 kB] 207s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 15-20250222-0ubuntu1 [1355 kB] 207s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 15-20250222-0ubuntu1 [2756 kB] 207s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 15-20250222-0ubuntu1 [1205 kB] 207s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 15-20250222-0ubuntu1 [1677 kB] 207s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 15-20250222-0ubuntu1 [152 kB] 207s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-17ubuntu3 [2816 kB] 207s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [23.3 MB] 208s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-17ubuntu3 [536 kB] 208s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1208 B] 208s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.2.0-1ubuntu1 [5004 B] 208s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-17ubuntu3 [2486 kB] 208s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [13.4 MB] 208s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-17ubuntu3 [21.8 kB] 208s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [968 B] 208s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.2.0-1ubuntu1 [1100 B] 208s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 208s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 dctrl-tools amd64 2.24-3build3 [106 kB] 208s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 208s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 209s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-2ubuntu1 [37.4 kB] 209s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-2ubuntu1 [164 kB] 209s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-2ubuntu1 [180 kB] 209s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 209s Get:34 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 209s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 209s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 15-20250222-0ubuntu1 [919 kB] 209s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran-14-dev amd64 14.2.0-17ubuntu3 [966 kB] 209s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [12.6 MB] 209s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14 amd64 14.2.0-17ubuntu3 [13.6 kB] 209s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1022 B] 209s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran amd64 4:14.2.0-1ubuntu1 [1174 B] 209s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 icu-devtools amd64 76.1-1ubuntu2 [237 kB] 209s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 12 [5216 B] 209s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libsuitesparseconfig7 amd64 1:7.8.3+dfsg-3 [13.5 kB] 209s Get:45 http://ftpmaster.internal/ubuntu plucky/universe amd64 libamd3 amd64 1:7.8.3+dfsg-3 [31.0 kB] 209s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 209s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas-dev amd64 3.12.1-2 [338 kB] 209s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost1.83-dev amd64 1.83.0-4.1ubuntu2 [10.7 MB] 209s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost-dev amd64 1.83.0.2ubuntu1 [4468 B] 209s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libbz2-dev amd64 1.0.8-6 [33.8 kB] 209s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 209s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 209s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 209s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 209s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 209s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libcolamd3 amd64 1:7.8.3+dfsg-3 [19.5 kB] 209s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 209s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB] 209s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate-dev amd64 1.23-1 [71.7 kB] 209s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl7 amd64 2.5.4-4 [46.5 kB] 209s Get:61 http://ftpmaster.internal/ubuntu plucky/universe amd64 libglpk40 amd64 5.0-1build2 [369 kB] 209s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 209s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB] 210s Get:64 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhnswlib-dev all 0.8.0-1build3 [24.4 kB] 210s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 210s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 210s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libicu-dev amd64 76.1-1ubuntu2 [12.6 MB] 210s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 210s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8-dev amd64 2.1.5-3ubuntu2 [324 kB] 210s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 210s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 210s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 210s Get:73 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 210s Get:74 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 210s Get:75 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 210s Get:76 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 210s Get:77 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 210s Get:78 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 210s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 210s Get:80 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 210s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 210s Get:82 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 210s Get:83 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 210s Get:84 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 210s Get:85 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 210s Get:86 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 210s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 210s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack-dev amd64 3.12.1-2 [6489 kB] 210s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 210s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 liblua5.4-0 amd64 5.4.7-1 [196 kB] 210s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses-dev amd64 6.5+20250216-2 [424 kB] 210s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 210s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 210s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.56.2-1 [255 kB] 210s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.56.2-1 [52.6 kB] 210s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.56.2-1 [29.1 kB] 210s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB] 210s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB] 210s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.45-1 [268 kB] 210s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-32-0 amd64 10.45-1 [251 kB] 210s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-posix3 amd64 10.45-1 [7204 B] 211s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-dev amd64 10.45-1 [908 kB] 211s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 libpkgconf3 amd64 1.8.1-4 [32.3 kB] 211s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 211s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 libpng-dev amd64 1.6.47-1 [298 kB] 211s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libreadline-dev amd64 8.2-6 [184 kB] 211s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 211s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 211s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB] 211s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 211s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 211s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 211s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 211s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 211s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB] 211s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 211s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu2 [185 kB] 211s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 211s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 211s Get:120 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.3-1 [28.9 MB] 212s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-2 [96.6 kB] 212s Get:122 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-2 [2554 B] 212s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 212s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 212s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 212s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 212s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc amd64 3.1.11.1+ds-2 [27.2 MB] 213s Get:128 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma-dev amd64 5.6.4-1 [189 kB] 213s Get:129 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf-bin amd64 1.8.1-4 [21.6 kB] 213s Get:130 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf amd64 1.8.1-4 [16.8 kB] 213s Get:131 http://ftpmaster.internal/ubuntu plucky/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3 [193 kB] 213s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-dev all 4.4.3-1 [4176 B] 213s Get:133 http://ftpmaster.internal/ubuntu plucky/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 213s Get:134 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 213s Get:135 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-assorthead all 1.0.1+ds-2 [194 kB] 213s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 213s Get:137 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrix amd64 1.7-3-1 [4349 kB] 213s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixstats amd64 1.5.0-1 [542 kB] 213s Get:139 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 213s Get:140 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2065 kB] 213s Get:141 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-iranges amd64 2.40.1-2 [2310 kB] 213s Get:142 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-abind all 1.4-8-1 [66.9 kB] 213s Get:143 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB] 213s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-s4arrays amd64 1.6.0+dfsg-2 [698 kB] 213s Get:145 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 213s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-xvector amd64 0.46.0-2 [620 kB] 213s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-sparsearray amd64 1.6.2+dfsg-1 [1392 kB] 213s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-delayedarray amd64 0.32.0+dfsg-2 [2064 kB] 213s Get:149 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 213s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.14-1 [1998 kB] 213s Get:151 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-beachmat amd64 2.22.0+ds-2 [976 kB] 213s Get:152 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biobase amd64 2.66.0-2 [2332 kB] 213s Get:153 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocneighbors amd64 2.0.1+ds-2 [446 kB] 213s Get:154 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-formatr all 1.14-2 [152 kB] 213s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 213s Get:156 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 213s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 213s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 213s Get:159 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-codetools all 0.2-20-1 [90.5 kB] 213s Get:160 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bh all 1.84.0-1 [5962 B] 214s Get:161 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cpp11 all 0.5.2-1 [233 kB] 214s Get:162 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocparallel amd64 1.40.0-2 [1337 kB] 214s Get:163 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-scaledmatrix all 1.14.0+dfsg-2 [324 kB] 214s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-irlba amd64 2.3.5.1-4 [295 kB] 214s Get:165 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rsvd all 1.0.5-1 [3589 kB] 214s Get:166 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocsingular amd64 1.22.0+ds-2 [357 kB] 214s Get:167 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-graph amd64 1.84.1-1 [1298 kB] 214s Get:168 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rbgl amd64 1.82.0+dfsg-2 [588 kB] 214s Get:169 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xml amd64 3.99-0.18-1 [1748 kB] 214s Get:170 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bitops amd64 1.0-9-1 [30.3 kB] 214s Get:171 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcurl amd64 1.98-1.16+dfsg-1 [807 kB] 214s Get:172 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-runit all 0.4.33-1 [377 kB] 214s Get:173 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 214s Get:174 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocviews all 1.74.0-2 [670 kB] 214s Get:175 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1428 kB] 214s Get:176 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rspectra amd64 0.16-2-1 [448 kB] 214s Get:177 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mass amd64 7.3-64-1 [1114 kB] 214s Get:178 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-pcamethods amd64 1.98.0-2 [1390 kB] 214s Get:179 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-curl amd64 6.2.1+dfsg-1ubuntu1 [197 kB] 214s Get:180 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB] 214s Get:181 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 214s Get:182 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB] 214s Get:183 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB] 214s Get:184 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-openssl amd64 2.3.2+dfsg-1 [407 kB] 214s Get:185 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB] 214s Get:186 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 214s Get:187 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 214s Get:188 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 215s Get:189 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 215s Get:190 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomicranges amd64 1.58.0+dfsg-2 [2083 kB] 215s Get:191 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 215s Get:192 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-singlecellexperiment all 1.28.1+ds-2 [829 kB] 215s Get:193 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB] 215s Get:194 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 215s Get:195 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.5-1 [1719 kB] 215s Get:196 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 215s Get:197 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 215s Get:198 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 215s Get:199 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nlme amd64 3.1.167-1 [2320 kB] 215s Get:200 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB] 216s Get:201 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB] 216s Get:202 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 216s Get:203 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colorspace amd64 2.1-1+dfsg-1 [1563 kB] 216s Get:204 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-munsell all 0.5.1-1 [213 kB] 216s Get:205 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 216s Get:206 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridislite all 0.4.2-2 [1088 kB] 216s Get:207 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scales all 1.3.0-1 [603 kB] 216s Get:208 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 216s Get:209 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 216s Get:210 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 216s Get:211 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 217s Get:212 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 217s Get:213 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 217s Get:214 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB] 217s Get:215 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 217s Get:216 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 217s Get:217 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-hexbin amd64 1.28.5-1 [1581 kB] 217s Get:218 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggplot.multistats all 1.0.1-1 [33.4 kB] 217s Get:219 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB] 217s Get:220 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB] 217s Get:221 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB] 217s Get:222 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-purrr amd64 1.0.4-1 [552 kB] 217s Get:223 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringi amd64 1.8.4-1build1 [927 kB] 217s Get:224 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 217s Get:225 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 217s Get:226 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggthemes all 5.1.0-1 [434 kB] 217s Get:227 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cardata all 3.0.5-1 [1819 kB] 217s Get:228 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-formula all 1.2-5-1 [158 kB] 217s Get:229 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nnet amd64 7.3-20-1 [116 kB] 217s Get:230 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-boot all 1.3-31-1 [635 kB] 217s Get:231 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-minqa amd64 1.2.8-1 [119 kB] 217s Get:232 http://ftpmaster.internal/ubuntu plucky/universe amd64 libnlopt0 amd64 2.7.1-6ubuntu3 [251 kB] 217s Get:233 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nloptr amd64 2.1.1-1 [251 kB] 217s Get:234 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rbibutils amd64 2.3-1 [1023 kB] 217s Get:235 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rdpack all 2.6.2-1syncable1 [756 kB] 217s Get:236 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reformulas all 0.4.0-1 [91.5 kB] 217s Get:237 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-statmod amd64 1.5.0-1 [295 kB] 217s Get:238 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lme4 amd64 1.1-36-1 [4135 kB] 218s Get:239 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-backports amd64 1.5.0-2 [121 kB] 218s Get:240 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-broom all 1.0.7+dfsg-1 [1802 kB] 218s Get:241 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-numderiv all 2016.8-1.1-3 [115 kB] 218s Get:242 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cowplot all 1.1.3+dfsg-1 [614 kB] 218s Get:243 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-deriv all 4.1.6-1 [151 kB] 218s Get:244 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-modelr all 0.1.11-1 [195 kB] 218s Get:245 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-microbenchmark amd64 1.5.0-1 [67.4 kB] 218s Get:246 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-doby all 4.6.25-1 [4772 kB] 218s Get:247 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 1.0.3-1 [114 kB] 218s Get:248 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xfun amd64 0.51+dfsg-1 [574 kB] 218s Get:249 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 218s Get:250 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB] 218s Get:251 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 218s Get:252 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 218s Get:253 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pbkrtest all 0.5.3-1 [178 kB] 218s Get:254 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sparsem amd64 1.84-2-1 [813 kB] 218s Get:255 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixmodels all 0.5-3-1 [361 kB] 218s Get:256 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-survival amd64 3.8-3-1 [8239 kB] 219s Get:257 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpparmadillo amd64 14.2.3-1-1 [864 kB] 219s Get:258 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-class amd64 7.3-23-1 [92.7 kB] 219s Get:259 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB] 219s Get:260 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-e1071 amd64 1.7-16-1 [565 kB] 219s Get:261 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-iterators all 1.0.14-1 [336 kB] 219s Get:262 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-foreach all 1.5.2-1 [124 kB] 219s Get:263 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-data.table amd64 1.17.0+dfsg-1 [2168 kB] 219s Get:264 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-modelmetrics amd64 1.2.2.2-1build1 [128 kB] 219s Get:265 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB] 219s Get:266 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-proc amd64 1.18.5-1 [966 kB] 219s Get:267 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tzdb amd64 0.4.0-2 [521 kB] 219s Get:268 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-clock amd64 0.7.2-1 [1903 kB] 219s Get:269 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gower amd64 1.0.2-1 [210 kB] 219s Get:270 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-hardhat all 1.4.0+dfsg-1 [565 kB] 219s Get:271 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rpart amd64 4.1.24-1 [670 kB] 219s Get:272 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shape all 1.4.6.1-1 [749 kB] 219s Get:273 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diagram all 1.6.5-2 [656 kB] 219s Get:274 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kernsmooth amd64 2.23-26-1 [94.5 kB] 219s Get:275 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB] 219s Get:276 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-globals all 0.16.3-1 [120 kB] 219s Get:277 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-listenv all 0.9.1+dfsg-1 [112 kB] 219s Get:278 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-parallelly amd64 1.42.0-1 [540 kB] 219s Get:279 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-future all 1.34.0+dfsg-1 [646 kB] 219s Get:280 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-future.apply all 1.11.3+dfsg-1 [175 kB] 219s Get:281 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-progressr all 0.15.1-1 [353 kB] 219s Get:282 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-squarem all 2021.1-1 [179 kB] 219s Get:283 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lava all 1.8.1+dfsg-1 [2191 kB] 219s Get:284 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-prodlim amd64 2024.06.25-1 [415 kB] 220s Get:285 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ipred amd64 0.9-15-1 [386 kB] 220s Get:286 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-timechange amd64 0.3.0-1 [178 kB] 220s Get:287 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lubridate amd64 1.9.4+dfsg-1 [1009 kB] 220s Get:288 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-timedate amd64 4041.110-1 [1208 kB] 220s Get:289 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-recipes all 1.1.0+dfsg-1 [2035 kB] 220s Get:290 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reshape2 amd64 1.4.4-2build1 [114 kB] 220s Get:291 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-caret amd64 7.0-1+dfsg-1 [3460 kB] 220s Get:292 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-conquer amd64 1.3.3-1 [499 kB] 220s Get:293 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-quantreg amd64 6.00-1 [1454 kB] 220s Get:294 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-foreign amd64 0.8.88-1 [250 kB] 220s Get:295 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ellipsis amd64 0.3.2-2 [35.6 kB] 220s Get:296 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-forcats all 1.0.0-1 [369 kB] 220s Get:297 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-hms all 1.1.3-1 [96.5 kB] 220s Get:298 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-clipr all 0.8.0-1 [53.5 kB] 220s Get:299 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bit amd64 4.6.0+dfsg-1 [466 kB] 220s Get:300 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bit64 amd64 4.6.0-1-1ubuntu2 [501 kB] 220s Get:301 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-prettyunits all 1.2.0-1 [162 kB] 220s Get:302 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-progress all 1.2.3-1 [91.9 kB] 220s Get:303 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vroom amd64 1.6.5-1 [848 kB] 220s Get:304 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-readr amd64 2.1.5-1 [766 kB] 221s Get:305 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-haven amd64 2.5.4-1 [346 kB] 221s Get:306 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rematch all 2.0.0-1 [18.3 kB] 221s Get:307 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cellranger all 1.1.0-3 [102 kB] 221s Get:308 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-readxl amd64 1.4.4-1 [360 kB] 221s Get:309 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-writexl amd64 1.5.1-1 [158 kB] 221s Get:310 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 221s Get:311 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.oo all 1.27.0-1 [979 kB] 221s Get:312 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.utils all 2.13.0-1 [1423 kB] 221s Get:313 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-zip amd64 2.3.2-1 [156 kB] 221s Get:314 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-openxlsx amd64 4.2.8-1 [2056 kB] 221s Get:315 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rio all 1.2.3-1 [546 kB] 221s Get:316 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-car all 3.1-3-1 [1525 kB] 221s Get:317 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-deoptimr all 1.1-3-1-1 [76.6 kB] 221s Get:318 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-robustbase amd64 0.99-4-1-1 [3038 kB] 221s Get:319 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sp amd64 1:2.2-0+dfsg-1 [1444 kB] 221s Get:320 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-zoo amd64 1.8-13-1 [999 kB] 221s Get:321 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lmtest amd64 0.9.40-1 [396 kB] 221s Get:322 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vcd all 1:1.4-13-1 [1281 kB] 221s Get:323 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-laeken all 0.5.3-1 [3091 kB] 222s Get:324 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ranger amd64 0.17.0-1 [500 kB] 222s Get:325 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vim amd64 6.2.2+dfsg-1 [1306 kB] 222s Get:326 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-knn.covertree amd64 1.0-2 [85.4 kB] 222s Get:327 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpphnsw amd64 0.6.0+ds-1 [185 kB] 222s Get:328 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xts amd64 0.14.1-1 [1198 kB] 222s Get:329 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ttr amd64 0.24.4-1 [511 kB] 222s Get:330 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-smoother all 1.3-1 [24.3 kB] 222s Get:331 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scatterplot3d all 0.3-44-1 [349 kB] 222s Get:332 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-destiny amd64 3.20.0-3 [1472 kB] 222s Get:333 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-hsmmsinglecell all 1.26.0-2 [16.7 MB] 222s Get:334 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-limma amd64 3.62.2+dfsg-1 [1969 kB] 222s Get:335 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vgam amd64 1.1-13-1 [7789 kB] 223s Get:336 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ddrtree amd64 0.1.5-2 [154 kB] 223s Get:337 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-igraph amd64 2.1.4-1 [5357 kB] 223s Get:338 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cluster amd64 2.1.8.1-1 [579 kB] 223s Get:339 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-combinat all 0.0-8-7build1 [43.1 kB] 223s Get:340 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastica amd64 1.2-7-1 [46.6 kB] 223s Get:341 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rtsne amd64 0.17-1 [109 kB] 223s Get:342 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-leidenbase amd64 0.1.32-1 [2512 kB] 223s Get:343 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pheatmap all 1.0.12-2build1 [78.2 kB] 223s Get:344 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-slam amd64 0.1-55-1 [188 kB] 223s Get:345 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gridextra all 2.3-3build1 [1024 kB] 223s Get:346 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridis all 0.6.5-1 [2770 kB] 223s Get:347 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rann amd64 2.6.2-1 [46.3 kB] 223s Get:348 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-monocle amd64 2.34.0-2 [1522 kB] 223s Get:349 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-scuttle amd64 1.16.0+dfsg-3 [459 kB] 223s Get:350 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-beeswarm amd64 0.4.0-1 [82.3 kB] 223s Get:351 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vipor all 0.4.7-1 [4624 kB] 223s Get:352 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggbeeswarm all 0.7.2-1 [1732 kB] 223s Get:353 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppml amd64 0.3.7-2 [180 kB] 223s Get:354 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fnn amd64 1.1.4.1-1 [126 kB] 223s Get:355 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppannoy amd64 0.0.22-1 [235 kB] 223s Get:356 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sitmo amd64 2.0.2-1 [130 kB] 223s Get:357 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dqrng amd64 0.3.2+dfsg-1 [161 kB] 223s Get:358 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppprogress all 0.4.2-2build1 [22.0 kB] 223s Get:359 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-uwot amd64 0.2.3-1 [1080 kB] 224s Get:360 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggrepel amd64 0.9.6-1 [270 kB] 224s Get:361 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cairo amd64 1.6-2-1 [88.8 kB] 224s Get:362 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-png amd64 0.1-8-1build2 [40.6 kB] 224s Get:363 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-systemfonts amd64 1.2.1-1 [347 kB] 224s Get:364 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-textshaping amd64 0.3.7-2 [95.5 kB] 224s Get:365 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ragg amd64 1.3.3-1 [510 kB] 224s Get:366 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggrastr all 1.0.2-1 [2566 kB] 224s Get:367 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-scater all 1.34.1+ds-1 [472 kB] 224s Get:368 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-acepack amd64 1.6.1-1 [91.2 kB] 224s Get:369 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 224s Get:370 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 224s Get:371 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 224s Get:372 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 224s Get:373 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 224s Get:374 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 224s Get:375 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 224s Get:376 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB] 224s Get:377 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 224s Get:378 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 224s Get:379 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 224s Get:380 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ps amd64 1.9.0-1 [408 kB] 224s Get:381 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-processx amd64 3.8.6-1 [365 kB] 224s Get:382 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 224s Get:383 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-catools amd64 1.18.3-1 [209 kB] 224s Get:384 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-checkmate amd64 2.3.2-1 [706 kB] 224s Get:385 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-chron amd64 2.3-62-1 [189 kB] 224s Get:386 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 224s Get:387 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tinytex all 0.56-1 [148 kB] 224s Get:388 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-modernizr all 3.13.0-0.1 [101 kB] 224s Get:389 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB] 224s Get:390 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB] 224s Get:391 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 224s Get:392 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 224s Get:393 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 224s Get:394 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.2-2 [137 kB] 224s Get:395 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 224s Get:396 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 224s Get:397 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 224s Get:398 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 224s Get:399 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-miniui all 0.1.1.1-3build1 [36.1 kB] 224s Get:400 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shinyjs all 2.1.0-1 [967 kB] 224s Get:401 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colourpicker all 1.3.0+dfsg-1 [1191 kB] 224s Get:402 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lazyeval amd64 0.2.2-1build1 [144 kB] 224s Get:403 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 224s Get:404 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-deldir amd64 2.0-4-1build1 [270 kB] 225s Get:405 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 225s Get:406 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 225s Get:407 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dotcall64 amd64 1.2-1 [36.8 kB] 225s Get:408 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastdummies all 1.7.5-1 [51.1 kB] 225s Get:409 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fitdistrplus all 1.2-2-1 [2287 kB] 225s Get:410 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtools amd64 3.9.5-1 [340 kB] 225s Get:411 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gdata all 3.0.1-1 [491 kB] 225s Get:412 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggridges all 0.5.6-1 [2195 kB] 225s Get:413 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-goftest amd64 1.2-3-1 [59.5 kB] 225s Get:414 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gplots all 3.2.0-1 [484 kB] 225s Get:415 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rprojroot all 2.0.4-2 [125 kB] 225s Get:416 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-here all 1.0.1-2 [50.3 kB] 225s Get:417 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rstudioapi all 0.17.1-1 [299 kB] 226s Get:418 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltable all 2.4.3-1 [388 kB] 226s Get:419 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jpeg amd64 0.1-10-1 [31.4 kB] 226s Get:420 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-interp amd64 1.1-6-1 [1454 kB] 226s Get:421 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-latticeextra all 0.6-30-1 [2198 kB] 226s Get:422 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-hmisc amd64 5.2-2-1 [3584 kB] 226s Get:423 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ica all 1.0-3-1 [85.4 kB] 226s Get:424 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-patchwork all 1.3.0-1 [3220 kB] 226s Get:425 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pbapply all 1.7-2-1 [102 kB] 226s Get:426 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgbuild all 1.4.6-1 [213 kB] 226s Get:427 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgload all 1.4.0-1 [247 kB] 226s Get:428 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plotly all 4.10.4+dfsg-2 [3666 kB] 227s Get:429 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-polyclip amd64 1.10-7-1 [116 kB] 227s Get:430 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 227s Get:431 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpptoml amd64 0.2.3+dfsg-1 [118 kB] 227s Get:432 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reticulate amd64 1.41.0+dfsg-1 [1304 kB] 227s Get:433 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rocr all 1.0-11-3 [456 kB] 227s Get:434 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scattermore amd64 1.2-1 [331 kB] 227s Get:435 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sctransform amd64 0.4.1-1 [504 kB] 227s Get:436 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spam amd64 2.11-1-1 [2756 kB] 227s Get:437 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-seuratobject amd64 5.0.2-1 [1744 kB] 227s Get:438 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.utils amd64 3.1-2-1 [383 kB] 227s Get:439 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.data all 3.1-4-1 [4047 kB] 227s Get:440 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.univar amd64 3.1-1-1build1 [310 kB] 227s Get:441 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.geom amd64 3.3-5-1 [3959 kB] 228s Get:442 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.random amd64 3.3-2-1 [1172 kB] 228s Get:443 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tensor all 1.5-4 [15.7 kB] 228s Get:444 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.sparse amd64 3.1-0-1 [221 kB] 228s Get:445 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-spatstat.explore amd64 3.3-4-1 [3347 kB] 228s Get:446 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-seurat amd64 5.2.1-4 [3293 kB] 228s Get:447 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-waldo all 0.6.1-2 [150 kB] 228s Get:448 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-testthat amd64 3.2.3-1 [1651 kB] 229s Preconfiguring packages ... 229s Fetched 491 MB in 22s (22.0 MB/s) 229s Selecting previously unselected package libisl23:amd64. 230s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84827 files and directories currently installed.) 230s Preparing to unpack .../000-libisl23_0.27-1_amd64.deb ... 230s Unpacking libisl23:amd64 (0.27-1) ... 230s Selecting previously unselected package libmpc3:amd64. 230s Preparing to unpack .../001-libmpc3_1.3.1-1build2_amd64.deb ... 230s Unpacking libmpc3:amd64 (1.3.1-1build2) ... 230s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 230s Preparing to unpack .../002-cpp-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 230s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 230s Selecting previously unselected package cpp-14. 230s Preparing to unpack .../003-cpp-14_14.2.0-17ubuntu3_amd64.deb ... 230s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 230s Selecting previously unselected package cpp-x86-64-linux-gnu. 230s Preparing to unpack .../004-cpp-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 230s Unpacking cpp-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 230s Selecting previously unselected package cpp. 230s Preparing to unpack .../005-cpp_4%3a14.2.0-1ubuntu1_amd64.deb ... 230s Unpacking cpp (4:14.2.0-1ubuntu1) ... 230s Selecting previously unselected package libcc1-0:amd64. 230s Preparing to unpack .../006-libcc1-0_15-20250222-0ubuntu1_amd64.deb ... 230s Unpacking libcc1-0:amd64 (15-20250222-0ubuntu1) ... 230s Selecting previously unselected package libgomp1:amd64. 230s Preparing to unpack .../007-libgomp1_15-20250222-0ubuntu1_amd64.deb ... 230s Unpacking libgomp1:amd64 (15-20250222-0ubuntu1) ... 230s Selecting previously unselected package libitm1:amd64. 230s Preparing to unpack .../008-libitm1_15-20250222-0ubuntu1_amd64.deb ... 230s Unpacking libitm1:amd64 (15-20250222-0ubuntu1) ... 230s Selecting previously unselected package libasan8:amd64. 230s Preparing to unpack .../009-libasan8_15-20250222-0ubuntu1_amd64.deb ... 230s Unpacking libasan8:amd64 (15-20250222-0ubuntu1) ... 230s Selecting previously unselected package liblsan0:amd64. 230s Preparing to unpack .../010-liblsan0_15-20250222-0ubuntu1_amd64.deb ... 230s Unpacking liblsan0:amd64 (15-20250222-0ubuntu1) ... 230s Selecting previously unselected package libtsan2:amd64. 230s Preparing to unpack .../011-libtsan2_15-20250222-0ubuntu1_amd64.deb ... 230s Unpacking libtsan2:amd64 (15-20250222-0ubuntu1) ... 230s Selecting previously unselected package libubsan1:amd64. 230s Preparing to unpack .../012-libubsan1_15-20250222-0ubuntu1_amd64.deb ... 230s Unpacking libubsan1:amd64 (15-20250222-0ubuntu1) ... 230s Selecting previously unselected package libhwasan0:amd64. 230s Preparing to unpack .../013-libhwasan0_15-20250222-0ubuntu1_amd64.deb ... 230s Unpacking libhwasan0:amd64 (15-20250222-0ubuntu1) ... 230s Selecting previously unselected package libquadmath0:amd64. 230s Preparing to unpack .../014-libquadmath0_15-20250222-0ubuntu1_amd64.deb ... 230s Unpacking libquadmath0:amd64 (15-20250222-0ubuntu1) ... 230s Selecting previously unselected package libgcc-14-dev:amd64. 231s Preparing to unpack .../015-libgcc-14-dev_14.2.0-17ubuntu3_amd64.deb ... 231s Unpacking libgcc-14-dev:amd64 (14.2.0-17ubuntu3) ... 231s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 231s Preparing to unpack .../016-gcc-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 231s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 231s Selecting previously unselected package gcc-14. 231s Preparing to unpack .../017-gcc-14_14.2.0-17ubuntu3_amd64.deb ... 231s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 231s Selecting previously unselected package gcc-x86-64-linux-gnu. 231s Preparing to unpack .../018-gcc-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 231s Unpacking gcc-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 231s Selecting previously unselected package gcc. 231s Preparing to unpack .../019-gcc_4%3a14.2.0-1ubuntu1_amd64.deb ... 231s Unpacking gcc (4:14.2.0-1ubuntu1) ... 231s Selecting previously unselected package libstdc++-14-dev:amd64. 231s Preparing to unpack .../020-libstdc++-14-dev_14.2.0-17ubuntu3_amd64.deb ... 231s Unpacking libstdc++-14-dev:amd64 (14.2.0-17ubuntu3) ... 231s Selecting previously unselected package g++-14-x86-64-linux-gnu. 231s Preparing to unpack .../021-g++-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 231s Unpacking g++-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 232s Selecting previously unselected package g++-14. 232s Preparing to unpack .../022-g++-14_14.2.0-17ubuntu3_amd64.deb ... 232s Unpacking g++-14 (14.2.0-17ubuntu3) ... 232s Selecting previously unselected package g++-x86-64-linux-gnu. 232s Preparing to unpack .../023-g++-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 232s Unpacking g++-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 232s Selecting previously unselected package g++. 232s Preparing to unpack .../024-g++_4%3a14.2.0-1ubuntu1_amd64.deb ... 232s Unpacking g++ (4:14.2.0-1ubuntu1) ... 232s Selecting previously unselected package build-essential. 232s Preparing to unpack .../025-build-essential_12.10ubuntu1_amd64.deb ... 232s Unpacking build-essential (12.10ubuntu1) ... 232s Selecting previously unselected package dctrl-tools. 232s Preparing to unpack .../026-dctrl-tools_2.24-3build3_amd64.deb ... 232s Unpacking dctrl-tools (2.24-3build3) ... 232s Selecting previously unselected package fonts-dejavu-mono. 232s Preparing to unpack .../027-fonts-dejavu-mono_2.37-8_all.deb ... 232s Unpacking fonts-dejavu-mono (2.37-8) ... 232s Selecting previously unselected package fonts-dejavu-core. 232s Preparing to unpack .../028-fonts-dejavu-core_2.37-8_all.deb ... 232s Unpacking fonts-dejavu-core (2.37-8) ... 232s Selecting previously unselected package fontconfig-config. 232s Preparing to unpack .../029-fontconfig-config_2.15.0-2ubuntu1_amd64.deb ... 232s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 232s Selecting previously unselected package libfontconfig1:amd64. 232s Preparing to unpack .../030-libfontconfig1_2.15.0-2ubuntu1_amd64.deb ... 232s Unpacking libfontconfig1:amd64 (2.15.0-2ubuntu1) ... 232s Selecting previously unselected package fontconfig. 232s Preparing to unpack .../031-fontconfig_2.15.0-2ubuntu1_amd64.deb ... 232s Unpacking fontconfig (2.15.0-2ubuntu1) ... 232s Selecting previously unselected package fonts-font-awesome. 232s Preparing to unpack .../032-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 232s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 232s Selecting previously unselected package fonts-glyphicons-halflings. 232s Preparing to unpack .../033-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 232s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 232s Selecting previously unselected package fonts-mathjax. 232s Preparing to unpack .../034-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 232s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 232s Selecting previously unselected package libgfortran5:amd64. 232s Preparing to unpack .../035-libgfortran5_15-20250222-0ubuntu1_amd64.deb ... 232s Unpacking libgfortran5:amd64 (15-20250222-0ubuntu1) ... 232s Selecting previously unselected package libgfortran-14-dev:amd64. 232s Preparing to unpack .../036-libgfortran-14-dev_14.2.0-17ubuntu3_amd64.deb ... 232s Unpacking libgfortran-14-dev:amd64 (14.2.0-17ubuntu3) ... 233s Selecting previously unselected package gfortran-14-x86-64-linux-gnu. 233s Preparing to unpack .../037-gfortran-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 233s Unpacking gfortran-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 233s Selecting previously unselected package gfortran-14. 233s Preparing to unpack .../038-gfortran-14_14.2.0-17ubuntu3_amd64.deb ... 233s Unpacking gfortran-14 (14.2.0-17ubuntu3) ... 233s Selecting previously unselected package gfortran-x86-64-linux-gnu. 233s Preparing to unpack .../039-gfortran-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 233s Unpacking gfortran-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 233s Selecting previously unselected package gfortran. 233s Preparing to unpack .../040-gfortran_4%3a14.2.0-1ubuntu1_amd64.deb ... 233s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 233s Selecting previously unselected package icu-devtools. 233s Preparing to unpack .../041-icu-devtools_76.1-1ubuntu2_amd64.deb ... 233s Unpacking icu-devtools (76.1-1ubuntu2) ... 233s Selecting previously unselected package javascript-common. 233s Preparing to unpack .../042-javascript-common_12_all.deb ... 233s Unpacking javascript-common (12) ... 233s Selecting previously unselected package libsuitesparseconfig7:amd64. 233s Preparing to unpack .../043-libsuitesparseconfig7_1%3a7.8.3+dfsg-3_amd64.deb ... 233s Unpacking libsuitesparseconfig7:amd64 (1:7.8.3+dfsg-3) ... 233s Selecting previously unselected package libamd3:amd64. 233s Preparing to unpack .../044-libamd3_1%3a7.8.3+dfsg-3_amd64.deb ... 233s Unpacking libamd3:amd64 (1:7.8.3+dfsg-3) ... 233s Selecting previously unselected package libblas3:amd64. 233s Preparing to unpack .../045-libblas3_3.12.1-2_amd64.deb ... 233s Unpacking libblas3:amd64 (3.12.1-2) ... 233s Selecting previously unselected package libblas-dev:amd64. 233s Preparing to unpack .../046-libblas-dev_3.12.1-2_amd64.deb ... 233s Unpacking libblas-dev:amd64 (3.12.1-2) ... 233s Selecting previously unselected package libboost1.83-dev:amd64. 233s Preparing to unpack .../047-libboost1.83-dev_1.83.0-4.1ubuntu2_amd64.deb ... 233s Unpacking libboost1.83-dev:amd64 (1.83.0-4.1ubuntu2) ... 235s Selecting previously unselected package libboost-dev:amd64. 235s Preparing to unpack .../048-libboost-dev_1.83.0.2ubuntu1_amd64.deb ... 235s Unpacking libboost-dev:amd64 (1.83.0.2ubuntu1) ... 235s Selecting previously unselected package libbz2-dev:amd64. 235s Preparing to unpack .../049-libbz2-dev_1.0.8-6_amd64.deb ... 235s Unpacking libbz2-dev:amd64 (1.0.8-6) ... 235s Selecting previously unselected package libpixman-1-0:amd64. 235s Preparing to unpack .../050-libpixman-1-0_0.44.0-3_amd64.deb ... 235s Unpacking libpixman-1-0:amd64 (0.44.0-3) ... 235s Selecting previously unselected package libxcb-render0:amd64. 235s Preparing to unpack .../051-libxcb-render0_1.17.0-2_amd64.deb ... 235s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 235s Selecting previously unselected package libxcb-shm0:amd64. 235s Preparing to unpack .../052-libxcb-shm0_1.17.0-2_amd64.deb ... 235s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 235s Selecting previously unselected package libxrender1:amd64. 235s Preparing to unpack .../053-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 235s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 236s Selecting previously unselected package libcairo2:amd64. 236s Preparing to unpack .../054-libcairo2_1.18.2-2_amd64.deb ... 236s Unpacking libcairo2:amd64 (1.18.2-2) ... 236s Selecting previously unselected package libcolamd3:amd64. 236s Preparing to unpack .../055-libcolamd3_1%3a7.8.3+dfsg-3_amd64.deb ... 236s Unpacking libcolamd3:amd64 (1:7.8.3+dfsg-3) ... 236s Selecting previously unselected package libdatrie1:amd64. 236s Preparing to unpack .../056-libdatrie1_0.2.13-3build1_amd64.deb ... 236s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 236s Selecting previously unselected package libdeflate0:amd64. 236s Preparing to unpack .../057-libdeflate0_1.23-1_amd64.deb ... 236s Unpacking libdeflate0:amd64 (1.23-1) ... 236s Selecting previously unselected package libdeflate-dev:amd64. 236s Preparing to unpack .../058-libdeflate-dev_1.23-1_amd64.deb ... 236s Unpacking libdeflate-dev:amd64 (1.23-1) ... 236s Selecting previously unselected package libltdl7:amd64. 236s Preparing to unpack .../059-libltdl7_2.5.4-4_amd64.deb ... 236s Unpacking libltdl7:amd64 (2.5.4-4) ... 236s Selecting previously unselected package libglpk40:amd64. 236s Preparing to unpack .../060-libglpk40_5.0-1build2_amd64.deb ... 236s Unpacking libglpk40:amd64 (5.0-1build2) ... 236s Selecting previously unselected package libgraphite2-3:amd64. 236s Preparing to unpack .../061-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 236s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 236s Selecting previously unselected package libharfbuzz0b:amd64. 236s Preparing to unpack .../062-libharfbuzz0b_10.2.0-1_amd64.deb ... 236s Unpacking libharfbuzz0b:amd64 (10.2.0-1) ... 236s Selecting previously unselected package libhnswlib-dev. 236s Preparing to unpack .../063-libhnswlib-dev_0.8.0-1build3_all.deb ... 236s Unpacking libhnswlib-dev (0.8.0-1build3) ... 236s Selecting previously unselected package x11-common. 236s Preparing to unpack .../064-x11-common_1%3a7.7+23ubuntu3_all.deb ... 236s Unpacking x11-common (1:7.7+23ubuntu3) ... 236s Selecting previously unselected package libice6:amd64. 236s Preparing to unpack .../065-libice6_2%3a1.1.1-1_amd64.deb ... 236s Unpacking libice6:amd64 (2:1.1.1-1) ... 236s Selecting previously unselected package libicu-dev:amd64. 236s Preparing to unpack .../066-libicu-dev_76.1-1ubuntu2_amd64.deb ... 236s Unpacking libicu-dev:amd64 (76.1-1ubuntu2) ... 236s Selecting previously unselected package libjpeg-turbo8:amd64. 236s Preparing to unpack .../067-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ... 236s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 236s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 236s Preparing to unpack .../068-libjpeg-turbo8-dev_2.1.5-3ubuntu2_amd64.deb ... 236s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-3ubuntu2) ... 236s Selecting previously unselected package libjpeg8:amd64. 236s 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236s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 237s Selecting previously unselected package libjs-d3. 237s Preparing to unpack .../075-libjs-d3_3.5.17-4_all.deb ... 237s Unpacking libjs-d3 (3.5.17-4) ... 237s Selecting previously unselected package libjs-es5-shim. 237s Preparing to unpack .../076-libjs-es5-shim_4.6.7-2_all.deb ... 237s Unpacking libjs-es5-shim (4.6.7-2) ... 237s Selecting previously unselected package libjs-highlight.js. 237s Preparing to unpack .../077-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 237s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 237s Selecting previously unselected package libjs-jquery. 237s Preparing to unpack .../078-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 237s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 237s Selecting previously unselected package libjs-jquery-datatables. 237s Preparing to unpack .../079-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 237s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 237s Selecting previously unselected package libjs-sifter.js. 237s Preparing to unpack .../080-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 237s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 237s Selecting previously unselected package libjs-microplugin.js. 237s Preparing to unpack .../081-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 237s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 237s Selecting previously unselected package libjs-jquery-selectize.js. 237s Preparing to unpack .../082-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 237s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 237s Selecting previously unselected package libjs-jquery-ui. 237s Preparing to unpack .../083-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 237s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 237s Selecting previously unselected package libjs-json. 237s Preparing to unpack .../084-libjs-json_0~20221030+~1.0.8-1_all.deb ... 237s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 237s Selecting previously 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libpcre2-posix3:amd64 (10.45-1) ... 238s Selecting previously unselected package libpcre2-dev:amd64. 238s Preparing to unpack .../101-libpcre2-dev_10.45-1_amd64.deb ... 238s Unpacking libpcre2-dev:amd64 (10.45-1) ... 238s Selecting previously unselected package libpkgconf3:amd64. 238s Preparing to unpack .../102-libpkgconf3_1.8.1-4_amd64.deb ... 238s Unpacking libpkgconf3:amd64 (1.8.1-4) ... 238s Selecting previously unselected package zlib1g-dev:amd64. 238s Preparing to unpack .../103-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ... 238s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 238s Selecting previously unselected package libpng-dev:amd64. 238s Preparing to unpack .../104-libpng-dev_1.6.47-1_amd64.deb ... 238s Unpacking libpng-dev:amd64 (1.6.47-1) ... 238s Selecting previously unselected package libreadline-dev:amd64. 238s Preparing to unpack .../105-libreadline-dev_8.2-6_amd64.deb ... 238s Unpacking libreadline-dev:amd64 (8.2-6) ... 238s Selecting previously unselected package libsharpyuv0:amd64. 238s Preparing to unpack .../106-libsharpyuv0_1.5.0-0.1_amd64.deb ... 238s Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ... 238s Selecting previously unselected package libsm6:amd64. 238s Preparing to unpack .../107-libsm6_2%3a1.2.4-1_amd64.deb ... 238s Unpacking libsm6:amd64 (2:1.2.4-1) ... 238s Selecting previously unselected package libtcl8.6:amd64. 238s Preparing to unpack .../108-libtcl8.6_8.6.16+dfsg-1_amd64.deb ... 238s Unpacking libtcl8.6:amd64 (8.6.16+dfsg-1) ... 238s Selecting previously unselected package libjbig0:amd64. 238s Preparing to unpack .../109-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 238s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 238s Selecting previously unselected package libwebp7:amd64. 238s Preparing to unpack .../110-libwebp7_1.5.0-0.1_amd64.deb ... 238s Unpacking libwebp7:amd64 (1.5.0-0.1) ... 238s Selecting previously unselected package libtiff6:amd64. 238s Preparing to unpack .../111-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ... 238s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 238s Selecting previously unselected package libxft2:amd64. 238s Preparing to unpack .../112-libxft2_2.3.6-1build1_amd64.deb ... 238s Unpacking libxft2:amd64 (2.3.6-1build1) ... 238s Selecting previously unselected package libxss1:amd64. 238s Preparing to unpack .../113-libxss1_1%3a1.2.3-1build3_amd64.deb ... 238s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 238s Selecting previously unselected package libtk8.6:amd64. 238s Preparing to unpack .../114-libtk8.6_8.6.16-1_amd64.deb ... 238s Unpacking libtk8.6:amd64 (8.6.16-1) ... 238s Selecting previously unselected package libxt6t64:amd64. 238s Preparing to unpack .../115-libxt6t64_1%3a1.2.1-1.2build1_amd64.deb ... 238s Unpacking libxt6t64:amd64 (1:1.2.1-1.2build1) ... 238s Selecting previously unselected package zip. 238s Preparing to unpack .../116-zip_3.0-14ubuntu2_amd64.deb ... 238s Unpacking zip (3.0-14ubuntu2) ... 238s Selecting previously unselected package unzip. 238s Preparing to unpack .../117-unzip_6.0-28ubuntu6_amd64.deb ... 238s Unpacking unzip (6.0-28ubuntu6) ... 238s Selecting previously unselected package xdg-utils. 238s Preparing to unpack .../118-xdg-utils_1.2.1-2ubuntu1_all.deb ... 238s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 238s Selecting previously unselected package r-base-core. 238s Preparing to unpack .../119-r-base-core_4.4.3-1_amd64.deb ... 238s Unpacking r-base-core (4.4.3-1) ... 239s Selecting previously unselected package r-cran-littler. 239s Preparing to unpack .../120-r-cran-littler_0.3.20-2_amd64.deb ... 239s Unpacking r-cran-littler (0.3.20-2) ... 239s Selecting previously unselected package littler. 239s Preparing to unpack .../121-littler_0.3.20-2_all.deb ... 239s Unpacking littler (0.3.20-2) ... 239s Selecting previously unselected package node-bootstrap-sass. 239s Preparing to unpack .../122-node-bootstrap-sass_3.4.3-2_all.deb ... 239s Unpacking node-bootstrap-sass (3.4.3-2) ... 239s Selecting previously unselected package node-html5shiv. 239s Preparing to unpack .../123-node-html5shiv_3.7.3+dfsg-5_all.deb ... 239s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 239s Selecting previously unselected package node-normalize.css. 239s Preparing to unpack .../124-node-normalize.css_8.0.1-5_all.deb ... 239s Unpacking node-normalize.css (8.0.1-5) ... 239s Selecting previously unselected package pandoc-data. 239s Preparing to unpack .../125-pandoc-data_3.1.11.1-3build1_all.deb ... 239s Unpacking pandoc-data (3.1.11.1-3build1) ... 239s Selecting previously unselected package pandoc. 239s Preparing to unpack .../126-pandoc_3.1.11.1+ds-2_amd64.deb ... 239s Unpacking pandoc (3.1.11.1+ds-2) ... 240s Selecting previously unselected package liblzma-dev:amd64. 240s Preparing to unpack .../127-liblzma-dev_5.6.4-1_amd64.deb ... 240s Unpacking liblzma-dev:amd64 (5.6.4-1) ... 240s Selecting previously unselected package pkgconf-bin. 240s Preparing to unpack .../128-pkgconf-bin_1.8.1-4_amd64.deb ... 240s Unpacking pkgconf-bin (1.8.1-4) ... 240s Selecting previously unselected package pkgconf:amd64. 240s Preparing to unpack .../129-pkgconf_1.8.1-4_amd64.deb ... 240s Unpacking pkgconf:amd64 (1.8.1-4) ... 240s Selecting previously unselected package libtirpc-dev:amd64. 240s Preparing to unpack .../130-libtirpc-dev_1.3.4+ds-1.3_amd64.deb ... 240s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1.3) ... 240s Selecting previously unselected package r-base-dev. 240s Preparing to unpack .../131-r-base-dev_4.4.3-1_all.deb ... 240s Unpacking r-base-dev (4.4.3-1) ... 240s Selecting previously unselected package pkg-r-autopkgtest. 240s Preparing to unpack .../132-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 240s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 240s Selecting previously unselected package r-bioc-biocgenerics. 240s Preparing to unpack .../133-r-bioc-biocgenerics_0.52.0-2_all.deb ... 240s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 240s Selecting previously unselected package r-bioc-assorthead. 240s Preparing to unpack .../134-r-bioc-assorthead_1.0.1+ds-2_all.deb ... 240s Unpacking r-bioc-assorthead (1.0.1+ds-2) ... 240s Selecting previously unselected package r-cran-lattice. 240s Preparing to unpack .../135-r-cran-lattice_0.22-6-1_amd64.deb ... 240s Unpacking r-cran-lattice (0.22-6-1) ... 240s Selecting previously unselected package r-cran-matrix. 240s Preparing to unpack .../136-r-cran-matrix_1.7-3-1_amd64.deb ... 240s Unpacking r-cran-matrix (1.7-3-1) ... 240s Selecting previously unselected package r-cran-matrixstats. 240s Preparing to unpack .../137-r-cran-matrixstats_1.5.0-1_amd64.deb ... 240s Unpacking r-cran-matrixstats (1.5.0-1) ... 240s Selecting previously unselected package r-bioc-matrixgenerics. 240s Preparing to unpack .../138-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 240s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 240s Selecting previously unselected package r-bioc-s4vectors. 240s Preparing to unpack .../139-r-bioc-s4vectors_0.44.0+dfsg-2_amd64.deb ... 240s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 240s Selecting previously unselected package r-bioc-iranges. 240s Preparing to unpack .../140-r-bioc-iranges_2.40.1-2_amd64.deb ... 240s Unpacking r-bioc-iranges (2.40.1-2) ... 240s Selecting previously unselected package r-cran-abind. 240s Preparing to unpack .../141-r-cran-abind_1.4-8-1_all.deb ... 240s Unpacking r-cran-abind (1.4-8-1) ... 240s Selecting previously unselected package r-cran-crayon. 240s Preparing to unpack .../142-r-cran-crayon_1.5.3-1_all.deb ... 240s Unpacking r-cran-crayon (1.5.3-1) ... 240s Selecting previously unselected package r-bioc-s4arrays. 240s Preparing to unpack .../143-r-bioc-s4arrays_1.6.0+dfsg-2_amd64.deb ... 240s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 240s Selecting previously unselected package r-bioc-zlibbioc. 240s Preparing to unpack .../144-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 240s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 240s Selecting previously unselected package r-bioc-xvector. 240s Preparing to unpack .../145-r-bioc-xvector_0.46.0-2_amd64.deb ... 240s Unpacking r-bioc-xvector (0.46.0-2) ... 241s Selecting previously unselected package r-bioc-sparsearray. 241s Preparing to unpack .../146-r-bioc-sparsearray_1.6.2+dfsg-1_amd64.deb ... 241s Unpacking r-bioc-sparsearray (1.6.2+dfsg-1) ... 241s Selecting previously unselected package r-bioc-delayedarray. 241s Preparing to unpack .../147-r-bioc-delayedarray_0.32.0+dfsg-2_amd64.deb ... 241s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 241s Selecting previously unselected package r-cran-pkgkitten. 241s Preparing to unpack .../148-r-cran-pkgkitten_0.2.4-1_all.deb ... 241s Unpacking r-cran-pkgkitten (0.2.4-1) ... 241s Selecting previously unselected package r-cran-rcpp. 241s Preparing to unpack .../149-r-cran-rcpp_1.0.14-1_amd64.deb ... 241s Unpacking r-cran-rcpp (1.0.14-1) ... 242s Selecting previously unselected package r-bioc-beachmat. 242s Preparing to unpack .../150-r-bioc-beachmat_2.22.0+ds-2_amd64.deb ... 242s Unpacking r-bioc-beachmat (2.22.0+ds-2) ... 242s Selecting previously unselected package r-bioc-biobase. 242s Preparing to unpack .../151-r-bioc-biobase_2.66.0-2_amd64.deb ... 242s Unpacking r-bioc-biobase (2.66.0-2) ... 242s Selecting previously unselected package r-bioc-biocneighbors. 242s Preparing to unpack .../152-r-bioc-biocneighbors_2.0.1+ds-2_amd64.deb ... 242s Unpacking r-bioc-biocneighbors (2.0.1+ds-2) ... 242s Selecting previously unselected package r-cran-formatr. 242s Preparing to unpack .../153-r-cran-formatr_1.14-2_all.deb ... 242s Unpacking r-cran-formatr (1.14-2) ... 242s Selecting previously unselected package r-cran-lambda.r. 242s Preparing to unpack .../154-r-cran-lambda.r_1.2.4-2build1_all.deb ... 242s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 242s Selecting previously unselected package r-cran-futile.options. 242s Preparing to unpack .../155-r-cran-futile.options_1.0.1-3build1_all.deb ... 242s Unpacking r-cran-futile.options (1.0.1-3build1) ... 242s Selecting previously unselected package r-cran-futile.logger. 242s Preparing to unpack .../156-r-cran-futile.logger_1.4.3-4build1_all.deb ... 242s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 242s Selecting previously unselected package r-cran-snow. 242s Preparing to unpack .../157-r-cran-snow_1%3a0.4.4-2_all.deb ... 242s Unpacking r-cran-snow (1:0.4.4-2) ... 242s Selecting previously unselected package r-cran-codetools. 242s Preparing to unpack .../158-r-cran-codetools_0.2-20-1_all.deb ... 242s Unpacking r-cran-codetools (0.2-20-1) ... 242s Selecting previously unselected package r-cran-bh. 242s Preparing to unpack .../159-r-cran-bh_1.84.0-1_all.deb ... 242s Unpacking r-cran-bh (1.84.0-1) ... 242s Selecting previously unselected package r-cran-cpp11. 242s Preparing to unpack .../160-r-cran-cpp11_0.5.2-1_all.deb ... 242s Unpacking r-cran-cpp11 (0.5.2-1) ... 242s Selecting previously unselected package r-bioc-biocparallel. 242s Preparing to unpack .../161-r-bioc-biocparallel_1.40.0-2_amd64.deb ... 242s Unpacking r-bioc-biocparallel (1.40.0-2) ... 242s Selecting previously unselected package r-bioc-scaledmatrix. 242s Preparing to unpack .../162-r-bioc-scaledmatrix_1.14.0+dfsg-2_all.deb ... 242s Unpacking r-bioc-scaledmatrix (1.14.0+dfsg-2) ... 242s Selecting previously unselected package r-cran-irlba. 242s Preparing to unpack .../163-r-cran-irlba_2.3.5.1-4_amd64.deb ... 242s Unpacking r-cran-irlba (2.3.5.1-4) ... 242s Selecting previously unselected package r-cran-rsvd. 242s Preparing to unpack .../164-r-cran-rsvd_1.0.5-1_all.deb ... 242s Unpacking r-cran-rsvd (1.0.5-1) ... 242s Selecting previously unselected package r-bioc-biocsingular. 242s Preparing to unpack .../165-r-bioc-biocsingular_1.22.0+ds-2_amd64.deb ... 242s Unpacking r-bioc-biocsingular (1.22.0+ds-2) ... 242s Selecting previously unselected package r-bioc-graph. 242s Preparing to unpack .../166-r-bioc-graph_1.84.1-1_amd64.deb ... 242s Unpacking r-bioc-graph (1.84.1-1) ... 242s Selecting previously unselected package r-bioc-rbgl. 242s Preparing to unpack .../167-r-bioc-rbgl_1.82.0+dfsg-2_amd64.deb ... 242s Unpacking r-bioc-rbgl (1.82.0+dfsg-2) ... 242s Selecting previously unselected package r-cran-xml. 242s Preparing to unpack .../168-r-cran-xml_3.99-0.18-1_amd64.deb ... 242s Unpacking r-cran-xml (3.99-0.18-1) ... 242s Selecting previously unselected package r-cran-bitops. 242s Preparing to unpack .../169-r-cran-bitops_1.0-9-1_amd64.deb ... 242s Unpacking r-cran-bitops (1.0-9-1) ... 242s Selecting previously unselected package r-cran-rcurl. 242s Preparing to unpack .../170-r-cran-rcurl_1.98-1.16+dfsg-1_amd64.deb ... 242s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 242s Selecting previously unselected package r-cran-runit. 242s Preparing to unpack .../171-r-cran-runit_0.4.33-1_all.deb ... 242s Unpacking r-cran-runit (0.4.33-1) ... 242s Selecting previously unselected package r-cran-biocmanager. 242s Preparing to unpack .../172-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 242s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 242s Selecting previously unselected package r-bioc-biocviews. 242s Preparing to unpack .../173-r-bioc-biocviews_1.74.0-2_all.deb ... 242s Unpacking r-bioc-biocviews (1.74.0-2) ... 242s Selecting previously unselected package r-cran-rcppeigen. 242s Preparing to unpack .../174-r-cran-rcppeigen_0.3.4.0.2-1_amd64.deb ... 242s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 242s Selecting previously unselected package r-cran-rspectra. 242s Preparing to unpack .../175-r-cran-rspectra_0.16-2-1_amd64.deb ... 242s Unpacking r-cran-rspectra (0.16-2-1) ... 242s Selecting previously unselected package r-cran-mass. 242s Preparing to unpack .../176-r-cran-mass_7.3-64-1_amd64.deb ... 242s Unpacking r-cran-mass (7.3-64-1) ... 242s Selecting previously unselected package r-bioc-pcamethods. 242s Preparing to unpack .../177-r-bioc-pcamethods_1.98.0-2_amd64.deb ... 242s Unpacking r-bioc-pcamethods (1.98.0-2) ... 242s Selecting previously unselected package r-cran-curl. 242s Preparing to unpack .../178-r-cran-curl_6.2.1+dfsg-1ubuntu1_amd64.deb ... 242s Unpacking r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 242s Selecting previously unselected package r-cran-jsonlite. 242s Preparing to unpack .../179-r-cran-jsonlite_1.9.1+dfsg-1_amd64.deb ... 242s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 242s Selecting previously unselected package r-cran-mime. 242s Preparing to unpack .../180-r-cran-mime_0.12-2_amd64.deb ... 242s Unpacking r-cran-mime (0.12-2) ... 242s Selecting previously unselected package r-cran-sys. 242s Preparing to unpack .../181-r-cran-sys_3.4.3-1_amd64.deb ... 242s Unpacking r-cran-sys (3.4.3-1) ... 242s Selecting previously unselected package r-cran-askpass. 242s Preparing to unpack .../182-r-cran-askpass_1.2.1-1_amd64.deb ... 242s Unpacking r-cran-askpass (1.2.1-1) ... 242s Selecting previously unselected package r-cran-openssl. 242s Preparing to unpack .../183-r-cran-openssl_2.3.2+dfsg-1_amd64.deb ... 242s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 242s Selecting previously unselected package r-cran-r6. 242s Preparing to unpack .../184-r-cran-r6_2.6.1-1_all.deb ... 242s Unpacking r-cran-r6 (2.6.1-1) ... 242s Selecting previously unselected package r-cran-httr. 242s Preparing to unpack .../185-r-cran-httr_1.4.7+dfsg-1_all.deb ... 242s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 242s Selecting previously unselected package r-bioc-ucsc.utils. 243s Preparing to unpack .../186-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 243s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 243s Selecting previously unselected package r-bioc-genomeinfodbdata. 243s Preparing to unpack .../187-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 243s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 243s Selecting previously unselected package r-bioc-genomeinfodb. 243s Preparing to unpack .../188-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 243s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 243s Selecting previously unselected package r-bioc-genomicranges. 243s Preparing to unpack .../189-r-bioc-genomicranges_1.58.0+dfsg-2_amd64.deb ... 243s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 243s Selecting previously unselected package r-bioc-summarizedexperiment. 243s Preparing to unpack .../190-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 243s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 243s Selecting previously unselected package r-bioc-singlecellexperiment. 243s Preparing to unpack .../191-r-bioc-singlecellexperiment_1.28.1+ds-2_all.deb ... 243s Unpacking r-bioc-singlecellexperiment (1.28.1+ds-2) ... 243s Selecting previously unselected package r-cran-cli. 243s Preparing to unpack .../192-r-cran-cli_3.6.4-1_amd64.deb ... 243s Unpacking r-cran-cli (3.6.4-1) ... 243s Selecting previously unselected package r-cran-glue. 243s Preparing to unpack .../193-r-cran-glue_1.8.0-1_amd64.deb ... 243s Unpacking r-cran-glue (1.8.0-1) ... 243s Selecting previously unselected package r-cran-rlang. 243s Preparing to unpack .../194-r-cran-rlang_1.1.5-1_amd64.deb ... 243s Unpacking r-cran-rlang (1.1.5-1) ... 243s Selecting previously unselected package r-cran-lifecycle. 243s Preparing to unpack .../195-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 243s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 243s Selecting previously unselected package r-cran-gtable. 243s Preparing to unpack .../196-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 243s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 243s Selecting previously unselected package r-cran-isoband. 243s Preparing to unpack .../197-r-cran-isoband_0.2.7-1_amd64.deb ... 243s Unpacking r-cran-isoband (0.2.7-1) ... 243s Selecting previously unselected package r-cran-nlme. 243s Preparing to unpack .../198-r-cran-nlme_3.1.167-1_amd64.deb ... 243s Unpacking r-cran-nlme (3.1.167-1) ... 243s Selecting previously unselected package r-cran-mgcv. 243s Preparing to unpack .../199-r-cran-mgcv_1.9-1-1_amd64.deb ... 243s Unpacking r-cran-mgcv (1.9-1-1) ... 243s Selecting previously unselected package r-cran-farver. 243s Preparing to unpack .../200-r-cran-farver_2.1.2-1_amd64.deb ... 243s Unpacking r-cran-farver (2.1.2-1) ... 243s Selecting previously unselected package r-cran-labeling. 243s Preparing to unpack .../201-r-cran-labeling_0.4.3-1_all.deb ... 243s Unpacking r-cran-labeling (0.4.3-1) ... 243s Selecting previously unselected package r-cran-colorspace. 243s Preparing to unpack .../202-r-cran-colorspace_2.1-1+dfsg-1_amd64.deb ... 243s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 243s Selecting previously unselected package r-cran-munsell. 243s Preparing to unpack .../203-r-cran-munsell_0.5.1-1_all.deb ... 243s Unpacking r-cran-munsell (0.5.1-1) ... 243s Selecting previously unselected package r-cran-rcolorbrewer. 243s Preparing to unpack .../204-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 243s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 243s Selecting previously unselected package r-cran-viridislite. 243s Preparing to unpack .../205-r-cran-viridislite_0.4.2-2_all.deb ... 243s Unpacking r-cran-viridislite (0.4.2-2) ... 243s Selecting previously unselected package r-cran-scales. 244s Preparing to unpack .../206-r-cran-scales_1.3.0-1_all.deb ... 244s Unpacking r-cran-scales (1.3.0-1) ... 244s Selecting previously unselected package r-cran-fansi. 244s Preparing to unpack .../207-r-cran-fansi_1.0.5-1_amd64.deb ... 244s Unpacking r-cran-fansi (1.0.5-1) ... 244s Selecting previously unselected package r-cran-magrittr. 244s Preparing to unpack .../208-r-cran-magrittr_2.0.3-1_amd64.deb ... 244s Unpacking r-cran-magrittr (2.0.3-1) ... 244s Selecting previously unselected package r-cran-utf8. 244s Preparing to unpack .../209-r-cran-utf8_1.2.4-1_amd64.deb ... 244s Unpacking r-cran-utf8 (1.2.4-1) ... 244s Selecting previously unselected package r-cran-vctrs. 244s Preparing to unpack .../210-r-cran-vctrs_0.6.5-1_amd64.deb ... 244s Unpacking r-cran-vctrs (0.6.5-1) ... 244s Selecting previously unselected package r-cran-pillar. 244s Preparing to unpack .../211-r-cran-pillar_1.10.1+dfsg-1_all.deb ... 244s Unpacking r-cran-pillar (1.10.1+dfsg-1) ... 244s Selecting previously unselected package r-cran-pkgconfig. 244s Preparing to unpack .../212-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 244s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 244s Selecting previously unselected package r-cran-tibble. 244s Preparing to unpack .../213-r-cran-tibble_3.2.1+dfsg-3_amd64.deb ... 244s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 244s Selecting previously unselected package r-cran-withr. 244s Preparing to unpack .../214-r-cran-withr_3.0.2+dfsg-1_all.deb ... 244s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 244s Selecting previously unselected package r-cran-ggplot2. 244s Preparing to unpack .../215-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 244s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 244s Selecting previously unselected package r-cran-hexbin. 244s Preparing to unpack .../216-r-cran-hexbin_1.28.5-1_amd64.deb ... 244s Unpacking r-cran-hexbin (1.28.5-1) ... 244s Selecting previously unselected package r-cran-ggplot.multistats. 244s Preparing to unpack .../217-r-cran-ggplot.multistats_1.0.1-1_all.deb ... 244s Unpacking r-cran-ggplot.multistats (1.0.1-1) ... 244s Selecting previously unselected package r-cran-generics. 244s Preparing to unpack .../218-r-cran-generics_0.1.3-1_all.deb ... 244s Unpacking r-cran-generics (0.1.3-1) ... 244s Selecting previously unselected package r-cran-tidyselect. 244s Preparing to unpack .../219-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ... 244s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 244s Selecting previously unselected package r-cran-dplyr. 244s Preparing to unpack .../220-r-cran-dplyr_1.1.4-4_amd64.deb ... 244s Unpacking r-cran-dplyr (1.1.4-4) ... 244s Selecting previously unselected package r-cran-purrr. 244s Preparing to unpack .../221-r-cran-purrr_1.0.4-1_amd64.deb ... 244s Unpacking r-cran-purrr (1.0.4-1) ... 244s Selecting previously unselected package r-cran-stringi. 244s Preparing to unpack .../222-r-cran-stringi_1.8.4-1build1_amd64.deb ... 244s Unpacking r-cran-stringi (1.8.4-1build1) ... 244s Selecting previously unselected package r-cran-stringr. 245s Preparing to unpack .../223-r-cran-stringr_1.5.1-1_all.deb ... 245s Unpacking r-cran-stringr (1.5.1-1) ... 245s Selecting previously unselected package r-cran-tidyr. 245s Preparing to unpack .../224-r-cran-tidyr_1.3.1-1_amd64.deb ... 245s Unpacking r-cran-tidyr (1.3.1-1) ... 245s Selecting previously unselected package r-cran-ggthemes. 245s Preparing to unpack .../225-r-cran-ggthemes_5.1.0-1_all.deb ... 245s Unpacking r-cran-ggthemes (5.1.0-1) ... 245s Selecting previously unselected package r-cran-cardata. 245s Preparing to unpack .../226-r-cran-cardata_3.0.5-1_all.deb ... 245s Unpacking r-cran-cardata (3.0.5-1) ... 245s Selecting previously unselected package r-cran-formula. 245s Preparing to unpack .../227-r-cran-formula_1.2-5-1_all.deb ... 245s Unpacking r-cran-formula (1.2-5-1) ... 245s Selecting previously unselected package r-cran-nnet. 245s Preparing to unpack .../228-r-cran-nnet_7.3-20-1_amd64.deb ... 245s Unpacking r-cran-nnet (7.3-20-1) ... 245s Selecting previously unselected package r-cran-boot. 245s Preparing to unpack .../229-r-cran-boot_1.3-31-1_all.deb ... 245s Unpacking r-cran-boot (1.3-31-1) ... 245s Selecting previously unselected package r-cran-minqa. 245s Preparing to unpack .../230-r-cran-minqa_1.2.8-1_amd64.deb ... 245s Unpacking r-cran-minqa (1.2.8-1) ... 245s Selecting previously unselected package libnlopt0:amd64. 245s Preparing to unpack .../231-libnlopt0_2.7.1-6ubuntu3_amd64.deb ... 245s Unpacking libnlopt0:amd64 (2.7.1-6ubuntu3) ... 245s Selecting previously unselected package r-cran-nloptr. 245s Preparing to unpack .../232-r-cran-nloptr_2.1.1-1_amd64.deb ... 245s Unpacking r-cran-nloptr (2.1.1-1) ... 245s Selecting previously unselected package r-cran-rbibutils. 245s Preparing to unpack .../233-r-cran-rbibutils_2.3-1_amd64.deb ... 245s Unpacking r-cran-rbibutils (2.3-1) ... 245s Selecting previously unselected package r-cran-rdpack. 245s Preparing to unpack .../234-r-cran-rdpack_2.6.2-1syncable1_all.deb ... 245s Unpacking r-cran-rdpack (2.6.2-1syncable1) ... 245s Selecting previously unselected package r-cran-reformulas. 245s Preparing to unpack .../235-r-cran-reformulas_0.4.0-1_all.deb ... 245s Unpacking r-cran-reformulas (0.4.0-1) ... 245s Selecting previously unselected package r-cran-statmod. 245s Preparing to unpack .../236-r-cran-statmod_1.5.0-1_amd64.deb ... 245s Unpacking r-cran-statmod (1.5.0-1) ... 245s Selecting previously unselected package r-cran-lme4. 245s Preparing to unpack .../237-r-cran-lme4_1.1-36-1_amd64.deb ... 245s Unpacking r-cran-lme4 (1.1-36-1) ... 245s Selecting previously unselected package r-cran-backports. 245s Preparing to unpack .../238-r-cran-backports_1.5.0-2_amd64.deb ... 245s Unpacking r-cran-backports (1.5.0-2) ... 245s Selecting previously unselected package r-cran-broom. 245s Preparing to unpack .../239-r-cran-broom_1.0.7+dfsg-1_all.deb ... 245s Unpacking r-cran-broom (1.0.7+dfsg-1) ... 245s Selecting previously unselected package r-cran-numderiv. 245s Preparing to unpack .../240-r-cran-numderiv_2016.8-1.1-3_all.deb ... 245s Unpacking r-cran-numderiv (2016.8-1.1-3) ... 245s Selecting previously unselected package r-cran-cowplot. 245s Preparing to unpack .../241-r-cran-cowplot_1.1.3+dfsg-1_all.deb ... 245s Unpacking r-cran-cowplot (1.1.3+dfsg-1) ... 245s Selecting previously unselected package r-cran-deriv. 245s Preparing to unpack .../242-r-cran-deriv_4.1.6-1_all.deb ... 245s Unpacking r-cran-deriv (4.1.6-1) ... 246s Selecting previously unselected package r-cran-modelr. 246s Preparing to unpack .../243-r-cran-modelr_0.1.11-1_all.deb ... 246s Unpacking r-cran-modelr (0.1.11-1) ... 246s Selecting previously unselected package r-cran-microbenchmark. 246s Preparing to unpack .../244-r-cran-microbenchmark_1.5.0-1_amd64.deb ... 246s Unpacking r-cran-microbenchmark (1.5.0-1) ... 246s Selecting previously unselected package r-cran-doby. 246s Preparing to unpack .../245-r-cran-doby_4.6.25-1_all.deb ... 246s Unpacking r-cran-doby (4.6.25-1) ... 246s Selecting previously unselected package r-cran-evaluate. 246s Preparing to unpack .../246-r-cran-evaluate_1.0.3-1_all.deb ... 246s Unpacking r-cran-evaluate (1.0.3-1) ... 246s Selecting previously unselected package r-cran-xfun. 246s Preparing to unpack .../247-r-cran-xfun_0.51+dfsg-1_amd64.deb ... 246s Unpacking r-cran-xfun (0.51+dfsg-1) ... 246s Selecting previously unselected package r-cran-highr. 246s Preparing to unpack .../248-r-cran-highr_0.11+dfsg-1_all.deb ... 246s Unpacking r-cran-highr (0.11+dfsg-1) ... 246s Selecting previously unselected package r-cran-yaml. 246s Preparing to unpack .../249-r-cran-yaml_2.3.10-1_amd64.deb ... 246s Unpacking r-cran-yaml (2.3.10-1) ... 246s Selecting previously unselected package libjs-mathjax. 246s Preparing to unpack .../250-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 246s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 246s Selecting previously unselected package r-cran-knitr. 247s Preparing to unpack .../251-r-cran-knitr_1.49+dfsg-1_all.deb ... 247s Unpacking r-cran-knitr (1.49+dfsg-1) ... 247s Selecting previously unselected package r-cran-pbkrtest. 247s Preparing to unpack .../252-r-cran-pbkrtest_0.5.3-1_all.deb ... 247s Unpacking r-cran-pbkrtest (0.5.3-1) ... 247s Selecting previously unselected package r-cran-sparsem. 247s Preparing to unpack .../253-r-cran-sparsem_1.84-2-1_amd64.deb ... 247s Unpacking r-cran-sparsem (1.84-2-1) ... 247s Selecting previously unselected package r-cran-matrixmodels. 247s Preparing to unpack .../254-r-cran-matrixmodels_0.5-3-1_all.deb ... 247s Unpacking r-cran-matrixmodels (0.5-3-1) ... 247s Selecting previously unselected package r-cran-survival. 247s Preparing to unpack .../255-r-cran-survival_3.8-3-1_amd64.deb ... 247s Unpacking r-cran-survival (3.8-3-1) ... 247s Selecting previously unselected package r-cran-rcpparmadillo. 247s Preparing to unpack .../256-r-cran-rcpparmadillo_14.2.3-1-1_amd64.deb ... 247s Unpacking r-cran-rcpparmadillo (14.2.3-1-1) ... 247s Selecting previously unselected package r-cran-class. 247s Preparing to unpack .../257-r-cran-class_7.3-23-1_amd64.deb ... 247s Unpacking r-cran-class (7.3-23-1) ... 247s Selecting previously unselected package r-cran-proxy. 247s Preparing to unpack .../258-r-cran-proxy_0.4-27-1_amd64.deb ... 247s Unpacking r-cran-proxy (0.4-27-1) ... 247s Selecting previously unselected package r-cran-e1071. 247s Preparing to unpack .../259-r-cran-e1071_1.7-16-1_amd64.deb ... 247s Unpacking r-cran-e1071 (1.7-16-1) ... 247s Selecting previously unselected package r-cran-iterators. 247s Preparing to unpack .../260-r-cran-iterators_1.0.14-1_all.deb ... 247s Unpacking r-cran-iterators (1.0.14-1) ... 247s Selecting previously unselected package r-cran-foreach. 247s Preparing to unpack .../261-r-cran-foreach_1.5.2-1_all.deb ... 247s Unpacking r-cran-foreach (1.5.2-1) ... 247s Selecting previously unselected package r-cran-data.table. 247s Preparing to unpack .../262-r-cran-data.table_1.17.0+dfsg-1_amd64.deb ... 247s Unpacking r-cran-data.table (1.17.0+dfsg-1) ... 247s Selecting previously unselected package r-cran-modelmetrics. 247s Preparing to unpack .../263-r-cran-modelmetrics_1.2.2.2-1build1_amd64.deb ... 247s Unpacking r-cran-modelmetrics (1.2.2.2-1build1) ... 247s Selecting previously unselected package r-cran-plyr. 247s Preparing to unpack .../264-r-cran-plyr_1.8.9-1_amd64.deb ... 247s Unpacking r-cran-plyr (1.8.9-1) ... 247s Selecting previously unselected package r-cran-proc. 247s Preparing to unpack .../265-r-cran-proc_1.18.5-1_amd64.deb ... 247s Unpacking r-cran-proc (1.18.5-1) ... 247s Selecting previously unselected package r-cran-tzdb. 247s Preparing to unpack .../266-r-cran-tzdb_0.4.0-2_amd64.deb ... 247s Unpacking r-cran-tzdb (0.4.0-2) ... 248s Selecting previously unselected package r-cran-clock. 248s Preparing to unpack .../267-r-cran-clock_0.7.2-1_amd64.deb ... 248s Unpacking r-cran-clock (0.7.2-1) ... 248s Selecting previously unselected package r-cran-gower. 248s Preparing to unpack .../268-r-cran-gower_1.0.2-1_amd64.deb ... 248s Unpacking r-cran-gower (1.0.2-1) ... 248s Selecting previously unselected package r-cran-hardhat. 248s Preparing to unpack .../269-r-cran-hardhat_1.4.0+dfsg-1_all.deb ... 248s Unpacking r-cran-hardhat (1.4.0+dfsg-1) ... 248s Selecting previously unselected package r-cran-rpart. 248s Preparing to unpack .../270-r-cran-rpart_4.1.24-1_amd64.deb ... 248s Unpacking r-cran-rpart (4.1.24-1) ... 248s Selecting previously unselected package r-cran-shape. 248s Preparing to unpack .../271-r-cran-shape_1.4.6.1-1_all.deb ... 248s Unpacking r-cran-shape (1.4.6.1-1) ... 248s Selecting previously unselected package r-cran-diagram. 248s Preparing to unpack .../272-r-cran-diagram_1.6.5-2_all.deb ... 248s Unpacking r-cran-diagram (1.6.5-2) ... 248s Selecting previously unselected package r-cran-kernsmooth. 248s Preparing to unpack .../273-r-cran-kernsmooth_2.23-26-1_amd64.deb ... 248s Unpacking r-cran-kernsmooth (2.23-26-1) ... 248s Selecting previously unselected package r-cran-digest. 248s Preparing to unpack .../274-r-cran-digest_0.6.37-1_amd64.deb ... 248s Unpacking r-cran-digest (0.6.37-1) ... 248s Selecting previously unselected package r-cran-globals. 248s Preparing to unpack .../275-r-cran-globals_0.16.3-1_all.deb ... 248s Unpacking r-cran-globals (0.16.3-1) ... 248s Selecting previously unselected package r-cran-listenv. 248s Preparing to unpack .../276-r-cran-listenv_0.9.1+dfsg-1_all.deb ... 248s Unpacking r-cran-listenv (0.9.1+dfsg-1) ... 248s Selecting previously unselected package r-cran-parallelly. 248s Preparing to unpack .../277-r-cran-parallelly_1.42.0-1_amd64.deb ... 248s Unpacking r-cran-parallelly (1.42.0-1) ... 248s Selecting previously unselected package r-cran-future. 248s Preparing to unpack .../278-r-cran-future_1.34.0+dfsg-1_all.deb ... 248s Unpacking r-cran-future (1.34.0+dfsg-1) ... 248s Selecting previously unselected package r-cran-future.apply. 248s Preparing to unpack .../279-r-cran-future.apply_1.11.3+dfsg-1_all.deb ... 248s Unpacking r-cran-future.apply (1.11.3+dfsg-1) ... 248s Selecting previously unselected package r-cran-progressr. 248s Preparing to unpack .../280-r-cran-progressr_0.15.1-1_all.deb ... 248s Unpacking r-cran-progressr (0.15.1-1) ... 248s Selecting previously unselected package r-cran-squarem. 248s Preparing to unpack .../281-r-cran-squarem_2021.1-1_all.deb ... 248s Unpacking r-cran-squarem (2021.1-1) ... 248s Selecting previously unselected package r-cran-lava. 248s Preparing to unpack .../282-r-cran-lava_1.8.1+dfsg-1_all.deb ... 248s Unpacking r-cran-lava (1.8.1+dfsg-1) ... 248s Selecting previously unselected package r-cran-prodlim. 248s Preparing to unpack .../283-r-cran-prodlim_2024.06.25-1_amd64.deb ... 248s Unpacking r-cran-prodlim (2024.06.25-1) ... 248s Selecting previously unselected package r-cran-ipred. 248s Preparing to unpack .../284-r-cran-ipred_0.9-15-1_amd64.deb ... 248s Unpacking r-cran-ipred (0.9-15-1) ... 248s Selecting previously unselected package r-cran-timechange. 248s Preparing to unpack .../285-r-cran-timechange_0.3.0-1_amd64.deb ... 248s Unpacking r-cran-timechange (0.3.0-1) ... 248s Selecting previously unselected package r-cran-lubridate. 248s Preparing to unpack .../286-r-cran-lubridate_1.9.4+dfsg-1_amd64.deb ... 248s Unpacking r-cran-lubridate (1.9.4+dfsg-1) ... 248s Selecting previously unselected package r-cran-timedate. 249s Preparing to unpack .../287-r-cran-timedate_4041.110-1_amd64.deb ... 249s Unpacking r-cran-timedate (4041.110-1) ... 249s Selecting previously unselected package r-cran-recipes. 249s Preparing to unpack .../288-r-cran-recipes_1.1.0+dfsg-1_all.deb ... 249s Unpacking r-cran-recipes (1.1.0+dfsg-1) ... 249s Selecting previously unselected package r-cran-reshape2. 249s Preparing to unpack .../289-r-cran-reshape2_1.4.4-2build1_amd64.deb ... 249s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 249s Selecting previously unselected package r-cran-caret. 249s Preparing to unpack .../290-r-cran-caret_7.0-1+dfsg-1_amd64.deb ... 249s Unpacking r-cran-caret (7.0-1+dfsg-1) ... 249s Selecting previously unselected package r-cran-conquer. 249s Preparing to unpack .../291-r-cran-conquer_1.3.3-1_amd64.deb ... 249s Unpacking r-cran-conquer (1.3.3-1) ... 249s Selecting previously unselected package r-cran-quantreg. 249s Preparing to unpack .../292-r-cran-quantreg_6.00-1_amd64.deb ... 249s Unpacking r-cran-quantreg (6.00-1) ... 249s Selecting previously unselected package r-cran-foreign. 249s Preparing to unpack .../293-r-cran-foreign_0.8.88-1_amd64.deb ... 249s Unpacking r-cran-foreign (0.8.88-1) ... 249s Selecting previously unselected package r-cran-ellipsis. 249s Preparing to unpack .../294-r-cran-ellipsis_0.3.2-2_amd64.deb ... 249s Unpacking r-cran-ellipsis (0.3.2-2) ... 249s Selecting previously unselected package r-cran-forcats. 249s Preparing to unpack .../295-r-cran-forcats_1.0.0-1_all.deb ... 249s Unpacking r-cran-forcats (1.0.0-1) ... 249s Selecting previously unselected package r-cran-hms. 249s Preparing to unpack .../296-r-cran-hms_1.1.3-1_all.deb ... 249s Unpacking r-cran-hms (1.1.3-1) ... 249s Selecting previously unselected package r-cran-clipr. 249s Preparing to unpack .../297-r-cran-clipr_0.8.0-1_all.deb ... 249s Unpacking r-cran-clipr (0.8.0-1) ... 249s Selecting previously unselected package r-cran-bit. 249s Preparing to unpack .../298-r-cran-bit_4.6.0+dfsg-1_amd64.deb ... 249s Unpacking r-cran-bit (4.6.0+dfsg-1) ... 249s Selecting previously unselected package r-cran-bit64. 249s Preparing to unpack .../299-r-cran-bit64_4.6.0-1-1ubuntu2_amd64.deb ... 249s Unpacking r-cran-bit64 (4.6.0-1-1ubuntu2) ... 249s Selecting previously unselected package r-cran-prettyunits. 249s Preparing to unpack .../300-r-cran-prettyunits_1.2.0-1_all.deb ... 249s Unpacking r-cran-prettyunits (1.2.0-1) ... 249s Selecting previously unselected package r-cran-progress. 249s Preparing to unpack .../301-r-cran-progress_1.2.3-1_all.deb ... 249s Unpacking r-cran-progress (1.2.3-1) ... 249s Selecting previously unselected package r-cran-vroom. 249s Preparing to unpack .../302-r-cran-vroom_1.6.5-1_amd64.deb ... 249s Unpacking r-cran-vroom (1.6.5-1) ... 249s Selecting previously unselected package r-cran-readr. 249s Preparing to unpack .../303-r-cran-readr_2.1.5-1_amd64.deb ... 249s Unpacking r-cran-readr (2.1.5-1) ... 249s Selecting previously unselected package r-cran-haven. 249s Preparing to unpack .../304-r-cran-haven_2.5.4-1_amd64.deb ... 249s Unpacking r-cran-haven (2.5.4-1) ... 249s Selecting previously unselected package r-cran-rematch. 249s Preparing to unpack .../305-r-cran-rematch_2.0.0-1_all.deb ... 249s Unpacking r-cran-rematch (2.0.0-1) ... 249s Selecting previously unselected package r-cran-cellranger. 249s Preparing to unpack .../306-r-cran-cellranger_1.1.0-3_all.deb ... 249s Unpacking r-cran-cellranger (1.1.0-3) ... 249s Selecting previously unselected package r-cran-readxl. 249s Preparing to unpack .../307-r-cran-readxl_1.4.4-1_amd64.deb ... 249s Unpacking r-cran-readxl (1.4.4-1) ... 250s Selecting previously unselected package r-cran-writexl. 250s Preparing to unpack .../308-r-cran-writexl_1.5.1-1_amd64.deb ... 250s Unpacking r-cran-writexl (1.5.1-1) ... 250s Selecting previously unselected package r-cran-r.methodss3. 250s Preparing to unpack .../309-r-cran-r.methodss3_1.8.2-1_all.deb ... 250s Unpacking r-cran-r.methodss3 (1.8.2-1) ... 250s Selecting previously unselected package r-cran-r.oo. 250s Preparing to unpack .../310-r-cran-r.oo_1.27.0-1_all.deb ... 250s Unpacking r-cran-r.oo (1.27.0-1) ... 250s Selecting previously unselected package r-cran-r.utils. 250s Preparing to unpack .../311-r-cran-r.utils_2.13.0-1_all.deb ... 250s Unpacking r-cran-r.utils (2.13.0-1) ... 250s Selecting previously unselected package r-cran-zip. 250s Preparing to unpack .../312-r-cran-zip_2.3.2-1_amd64.deb ... 250s Unpacking r-cran-zip (2.3.2-1) ... 250s Selecting previously unselected package r-cran-openxlsx. 250s Preparing to unpack .../313-r-cran-openxlsx_4.2.8-1_amd64.deb ... 250s Unpacking r-cran-openxlsx (4.2.8-1) ... 250s Selecting previously unselected package r-cran-rio. 250s Preparing to unpack .../314-r-cran-rio_1.2.3-1_all.deb ... 250s Unpacking r-cran-rio (1.2.3-1) ... 250s Selecting previously unselected package r-cran-car. 250s Preparing to unpack .../315-r-cran-car_3.1-3-1_all.deb ... 250s Unpacking r-cran-car (3.1-3-1) ... 250s Selecting previously unselected package r-cran-deoptimr. 250s Preparing to unpack .../316-r-cran-deoptimr_1.1-3-1-1_all.deb ... 250s Unpacking r-cran-deoptimr (1.1-3-1-1) ... 250s Selecting previously unselected package r-cran-robustbase. 250s Preparing to unpack .../317-r-cran-robustbase_0.99-4-1-1_amd64.deb ... 250s Unpacking r-cran-robustbase (0.99-4-1-1) ... 250s Selecting previously unselected package r-cran-sp. 250s Preparing to unpack .../318-r-cran-sp_1%3a2.2-0+dfsg-1_amd64.deb ... 250s Unpacking r-cran-sp (1:2.2-0+dfsg-1) ... 250s Selecting previously unselected package r-cran-zoo. 250s Preparing to unpack .../319-r-cran-zoo_1.8-13-1_amd64.deb ... 250s Unpacking r-cran-zoo (1.8-13-1) ... 250s Selecting previously unselected package r-cran-lmtest. 250s Preparing to unpack .../320-r-cran-lmtest_0.9.40-1_amd64.deb ... 250s Unpacking r-cran-lmtest (0.9.40-1) ... 250s Selecting previously unselected package r-cran-vcd. 250s Preparing to unpack .../321-r-cran-vcd_1%3a1.4-13-1_all.deb ... 250s Unpacking r-cran-vcd (1:1.4-13-1) ... 250s Selecting previously unselected package r-cran-laeken. 250s Preparing to unpack .../322-r-cran-laeken_0.5.3-1_all.deb ... 250s Unpacking r-cran-laeken (0.5.3-1) ... 250s Selecting previously unselected package r-cran-ranger. 250s Preparing to unpack .../323-r-cran-ranger_0.17.0-1_amd64.deb ... 250s Unpacking r-cran-ranger (0.17.0-1) ... 250s Selecting previously unselected package r-cran-vim. 250s Preparing to unpack .../324-r-cran-vim_6.2.2+dfsg-1_amd64.deb ... 250s Unpacking r-cran-vim (6.2.2+dfsg-1) ... 250s Selecting previously unselected package r-cran-knn.covertree. 250s Preparing to unpack .../325-r-cran-knn.covertree_1.0-2_amd64.deb ... 250s Unpacking r-cran-knn.covertree (1.0-2) ... 250s Selecting previously unselected package r-cran-rcpphnsw. 250s Preparing to unpack .../326-r-cran-rcpphnsw_0.6.0+ds-1_amd64.deb ... 250s Unpacking r-cran-rcpphnsw (0.6.0+ds-1) ... 250s Selecting previously unselected package r-cran-xts. 250s Preparing to unpack .../327-r-cran-xts_0.14.1-1_amd64.deb ... 250s Unpacking r-cran-xts (0.14.1-1) ... 250s Selecting previously unselected package r-cran-ttr. 251s Preparing to unpack .../328-r-cran-ttr_0.24.4-1_amd64.deb ... 251s Unpacking r-cran-ttr (0.24.4-1) ... 251s Selecting previously unselected package r-cran-smoother. 251s Preparing to unpack .../329-r-cran-smoother_1.3-1_all.deb ... 251s Unpacking r-cran-smoother (1.3-1) ... 251s Selecting previously unselected package r-cran-scatterplot3d. 251s Preparing to unpack .../330-r-cran-scatterplot3d_0.3-44-1_all.deb ... 251s Unpacking r-cran-scatterplot3d (0.3-44-1) ... 251s Selecting previously unselected package r-bioc-destiny. 251s Preparing to unpack .../331-r-bioc-destiny_3.20.0-3_amd64.deb ... 251s Unpacking r-bioc-destiny (3.20.0-3) ... 251s Selecting previously unselected package r-bioc-hsmmsinglecell. 251s Preparing to unpack .../332-r-bioc-hsmmsinglecell_1.26.0-2_all.deb ... 251s Unpacking r-bioc-hsmmsinglecell (1.26.0-2) ... 251s Selecting previously unselected package r-bioc-limma. 251s Preparing to unpack .../333-r-bioc-limma_3.62.2+dfsg-1_amd64.deb ... 251s Unpacking r-bioc-limma (3.62.2+dfsg-1) ... 251s Selecting previously unselected package r-cran-vgam. 251s Preparing to unpack .../334-r-cran-vgam_1.1-13-1_amd64.deb ... 251s Unpacking r-cran-vgam (1.1-13-1) ... 251s Selecting previously unselected package r-cran-ddrtree. 251s Preparing to unpack .../335-r-cran-ddrtree_0.1.5-2_amd64.deb ... 251s Unpacking r-cran-ddrtree (0.1.5-2) ... 251s Selecting previously unselected package r-cran-igraph. 251s Preparing to unpack .../336-r-cran-igraph_2.1.4-1_amd64.deb ... 251s Unpacking r-cran-igraph (2.1.4-1) ... 251s Selecting previously unselected package r-cran-cluster. 251s Preparing to unpack .../337-r-cran-cluster_2.1.8.1-1_amd64.deb ... 251s Unpacking r-cran-cluster (2.1.8.1-1) ... 251s Selecting previously unselected package r-cran-combinat. 251s Preparing to unpack .../338-r-cran-combinat_0.0-8-7build1_all.deb ... 251s Unpacking r-cran-combinat (0.0-8-7build1) ... 251s Selecting previously unselected package r-cran-fastica. 251s Preparing to unpack .../339-r-cran-fastica_1.2-7-1_amd64.deb ... 251s Unpacking r-cran-fastica (1.2-7-1) ... 251s Selecting previously unselected package r-cran-rtsne. 251s Preparing to unpack .../340-r-cran-rtsne_0.17-1_amd64.deb ... 251s Unpacking r-cran-rtsne (0.17-1) ... 251s Selecting previously unselected package r-cran-leidenbase. 251s Preparing to unpack .../341-r-cran-leidenbase_0.1.32-1_amd64.deb ... 251s Unpacking r-cran-leidenbase (0.1.32-1) ... 251s Selecting previously unselected package r-cran-pheatmap. 251s Preparing to unpack .../342-r-cran-pheatmap_1.0.12-2build1_all.deb ... 251s Unpacking r-cran-pheatmap (1.0.12-2build1) ... 251s Selecting previously unselected package r-cran-slam. 251s Preparing to unpack .../343-r-cran-slam_0.1-55-1_amd64.deb ... 251s Unpacking r-cran-slam (0.1-55-1) ... 251s Selecting previously unselected package r-cran-gridextra. 251s Preparing to unpack .../344-r-cran-gridextra_2.3-3build1_all.deb ... 251s Unpacking r-cran-gridextra (2.3-3build1) ... 252s Selecting previously unselected package r-cran-viridis. 252s Preparing to unpack .../345-r-cran-viridis_0.6.5-1_all.deb ... 252s Unpacking r-cran-viridis (0.6.5-1) ... 252s Selecting previously unselected package r-cran-rann. 252s Preparing to unpack .../346-r-cran-rann_2.6.2-1_amd64.deb ... 252s Unpacking r-cran-rann (2.6.2-1) ... 252s Selecting previously unselected package r-bioc-monocle. 252s Preparing to unpack .../347-r-bioc-monocle_2.34.0-2_amd64.deb ... 252s Unpacking r-bioc-monocle (2.34.0-2) ... 252s Selecting previously unselected package r-bioc-scuttle. 252s Preparing to unpack .../348-r-bioc-scuttle_1.16.0+dfsg-3_amd64.deb ... 252s Unpacking r-bioc-scuttle (1.16.0+dfsg-3) ... 252s Selecting previously unselected package r-cran-beeswarm. 252s Preparing to unpack .../349-r-cran-beeswarm_0.4.0-1_amd64.deb ... 252s Unpacking r-cran-beeswarm (0.4.0-1) ... 252s Selecting previously unselected package r-cran-vipor. 252s Preparing to unpack .../350-r-cran-vipor_0.4.7-1_all.deb ... 252s Unpacking r-cran-vipor (0.4.7-1) ... 252s Selecting previously unselected package r-cran-ggbeeswarm. 252s Preparing to unpack .../351-r-cran-ggbeeswarm_0.7.2-1_all.deb ... 252s Unpacking r-cran-ggbeeswarm (0.7.2-1) ... 252s Selecting previously unselected package r-cran-rcppml. 252s Preparing to unpack .../352-r-cran-rcppml_0.3.7-2_amd64.deb ... 252s Unpacking r-cran-rcppml (0.3.7-2) ... 252s Selecting previously unselected package r-cran-fnn. 252s Preparing to unpack .../353-r-cran-fnn_1.1.4.1-1_amd64.deb ... 252s Unpacking r-cran-fnn (1.1.4.1-1) ... 252s Selecting previously unselected package r-cran-rcppannoy. 252s Preparing to unpack .../354-r-cran-rcppannoy_0.0.22-1_amd64.deb ... 252s Unpacking r-cran-rcppannoy (0.0.22-1) ... 252s Selecting previously unselected package r-cran-sitmo. 252s Preparing to unpack .../355-r-cran-sitmo_2.0.2-1_amd64.deb ... 252s Unpacking r-cran-sitmo (2.0.2-1) ... 252s Selecting previously unselected package r-cran-dqrng. 252s Preparing to unpack .../356-r-cran-dqrng_0.3.2+dfsg-1_amd64.deb ... 252s Unpacking r-cran-dqrng (0.3.2+dfsg-1) ... 252s Selecting previously unselected package r-cran-rcppprogress. 252s Preparing to unpack .../357-r-cran-rcppprogress_0.4.2-2build1_all.deb ... 252s Unpacking r-cran-rcppprogress (0.4.2-2build1) ... 252s Selecting previously unselected package r-cran-uwot. 252s Preparing to unpack .../358-r-cran-uwot_0.2.3-1_amd64.deb ... 252s Unpacking r-cran-uwot (0.2.3-1) ... 252s Selecting previously unselected package r-cran-ggrepel. 252s Preparing to unpack .../359-r-cran-ggrepel_0.9.6-1_amd64.deb ... 252s Unpacking r-cran-ggrepel (0.9.6-1) ... 252s Selecting previously unselected package r-cran-cairo. 252s Preparing to unpack .../360-r-cran-cairo_1.6-2-1_amd64.deb ... 252s Unpacking r-cran-cairo (1.6-2-1) ... 252s Selecting previously unselected package r-cran-png. 252s Preparing to unpack .../361-r-cran-png_0.1-8-1build2_amd64.deb ... 252s Unpacking r-cran-png (0.1-8-1build2) ... 252s Selecting previously unselected package r-cran-systemfonts. 252s Preparing to unpack .../362-r-cran-systemfonts_1.2.1-1_amd64.deb ... 252s Unpacking r-cran-systemfonts (1.2.1-1) ... 252s Selecting previously unselected package r-cran-textshaping. 252s Preparing to unpack .../363-r-cran-textshaping_0.3.7-2_amd64.deb ... 252s Unpacking r-cran-textshaping (0.3.7-2) ... 252s Selecting previously unselected package r-cran-ragg. 252s Preparing to unpack .../364-r-cran-ragg_1.3.3-1_amd64.deb ... 252s Unpacking r-cran-ragg (1.3.3-1) ... 252s Selecting previously unselected package r-cran-ggrastr. 252s Preparing to unpack .../365-r-cran-ggrastr_1.0.2-1_all.deb ... 252s Unpacking r-cran-ggrastr (1.0.2-1) ... 252s Selecting previously unselected package r-bioc-scater. 252s Preparing to unpack .../366-r-bioc-scater_1.34.1+ds-1_all.deb ... 252s Unpacking r-bioc-scater (1.34.1+ds-1) ... 252s Selecting previously unselected package r-cran-acepack. 252s Preparing to unpack .../367-r-cran-acepack_1.6.1-1_amd64.deb ... 252s Unpacking r-cran-acepack (1.6.1-1) ... 253s Selecting previously unselected package r-cran-base64enc. 253s Preparing to unpack .../368-r-cran-base64enc_0.1-3-3_amd64.deb ... 253s Unpacking r-cran-base64enc (0.1-3-3) ... 253s Selecting previously unselected package r-cran-brio. 253s Preparing to unpack .../369-r-cran-brio_1.1.5-1_amd64.deb ... 253s Unpacking r-cran-brio (1.1.5-1) ... 253s Selecting previously unselected package r-cran-fastmap. 253s Preparing to unpack .../370-r-cran-fastmap_1.2.0-1_amd64.deb ... 253s Unpacking r-cran-fastmap (1.2.0-1) ... 253s Selecting previously unselected package r-cran-cachem. 253s Preparing to unpack .../371-r-cran-cachem_1.1.0-1_amd64.deb ... 253s Unpacking r-cran-cachem (1.1.0-1) ... 253s Selecting previously unselected package r-cran-htmltools. 253s Preparing to unpack .../372-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 253s Unpacking r-cran-htmltools (0.5.8.1-1) ... 253s Selecting previously unselected package r-cran-jquerylib. 253s Preparing to unpack .../373-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 253s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 253s Selecting previously unselected package r-cran-memoise. 253s Preparing to unpack .../374-r-cran-memoise_2.0.1-1_all.deb ... 253s Unpacking r-cran-memoise (2.0.1-1) ... 253s Selecting previously unselected package r-cran-fs. 253s Preparing to unpack .../375-r-cran-fs_1.6.5+dfsg-1_amd64.deb ... 253s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 253s Selecting previously unselected package r-cran-rappdirs. 253s Preparing to unpack .../376-r-cran-rappdirs_0.3.3-1_amd64.deb ... 253s Unpacking r-cran-rappdirs (0.3.3-1) ... 253s Selecting previously unselected package r-cran-sass. 253s Preparing to unpack .../377-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 253s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 253s Selecting previously unselected package r-cran-bslib. 253s Preparing to unpack .../378-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 253s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 253s Selecting previously unselected package r-cran-ps. 253s Preparing to unpack .../379-r-cran-ps_1.9.0-1_amd64.deb ... 253s Unpacking r-cran-ps (1.9.0-1) ... 253s Selecting previously unselected package r-cran-processx. 253s Preparing to unpack .../380-r-cran-processx_3.8.6-1_amd64.deb ... 253s Unpacking r-cran-processx (3.8.6-1) ... 253s Selecting previously unselected package r-cran-callr. 253s Preparing to unpack .../381-r-cran-callr_3.7.6-1_all.deb ... 253s Unpacking r-cran-callr (3.7.6-1) ... 253s Selecting previously unselected package r-cran-catools. 253s Preparing to unpack .../382-r-cran-catools_1.18.3-1_amd64.deb ... 253s Unpacking r-cran-catools (1.18.3-1) ... 253s Selecting previously unselected package r-cran-checkmate. 253s Preparing to unpack .../383-r-cran-checkmate_2.3.2-1_amd64.deb ... 253s Unpacking r-cran-checkmate (2.3.2-1) ... 253s Selecting previously unselected package r-cran-chron. 253s Preparing to unpack .../384-r-cran-chron_2.3-62-1_amd64.deb ... 253s Unpacking r-cran-chron (2.3-62-1) ... 253s Selecting previously unselected package r-cran-fontawesome. 253s Preparing to unpack .../385-r-cran-fontawesome_0.5.3-1_all.deb ... 253s Unpacking r-cran-fontawesome (0.5.3-1) ... 253s Selecting previously unselected package r-cran-tinytex. 253s Preparing to unpack .../386-r-cran-tinytex_0.56-1_all.deb ... 253s Unpacking r-cran-tinytex (0.56-1) ... 253s Selecting previously unselected package libjs-modernizr. 253s Preparing to unpack .../387-libjs-modernizr_3.13.0-0.1_all.deb ... 253s Unpacking libjs-modernizr (3.13.0-0.1) ... 253s Selecting previously unselected package r-cran-later. 253s Preparing to unpack .../388-r-cran-later_1.4.1+dfsg-1_amd64.deb ... 253s Unpacking r-cran-later (1.4.1+dfsg-1) ... 254s Selecting previously unselected package r-cran-promises. 254s Preparing to unpack .../389-r-cran-promises_1.3.2+dfsg-1_amd64.deb ... 254s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 254s Selecting previously unselected package r-cran-httpuv. 254s Preparing to unpack .../390-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 254s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 254s Selecting previously unselected package r-cran-xtable. 254s Preparing to unpack .../391-r-cran-xtable_1%3a1.8-4-2_all.deb ... 254s Unpacking r-cran-xtable (1:1.8-4-2) ... 254s Selecting previously unselected package r-cran-sourcetools. 254s Preparing to unpack .../392-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 254s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 254s Selecting previously unselected package r-cran-commonmark. 254s Preparing to unpack .../393-r-cran-commonmark_1.9.2-2_amd64.deb ... 254s Unpacking r-cran-commonmark (1.9.2-2) ... 254s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 254s Preparing to unpack .../394-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 254s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 254s Selecting previously unselected package r-cran-shiny. 254s Preparing to unpack .../395-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 254s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 254s Selecting previously unselected package r-cran-rmarkdown. 254s Preparing to unpack .../396-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 254s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 254s Selecting previously unselected package r-cran-htmlwidgets. 254s Preparing to unpack .../397-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 254s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 254s Selecting previously unselected package r-cran-miniui. 254s Preparing to unpack .../398-r-cran-miniui_0.1.1.1-3build1_all.deb ... 254s Unpacking r-cran-miniui (0.1.1.1-3build1) ... 254s Selecting previously unselected package r-cran-shinyjs. 254s Preparing to unpack .../399-r-cran-shinyjs_2.1.0-1_all.deb ... 254s Unpacking r-cran-shinyjs (2.1.0-1) ... 254s Selecting previously unselected package r-cran-colourpicker. 254s Preparing to unpack .../400-r-cran-colourpicker_1.3.0+dfsg-1_all.deb ... 254s Unpacking r-cran-colourpicker (1.3.0+dfsg-1) ... 254s Selecting previously unselected package r-cran-lazyeval. 254s Preparing to unpack .../401-r-cran-lazyeval_0.2.2-1build1_amd64.deb ... 254s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 254s Selecting previously unselected package r-cran-crosstalk. 254s Preparing to unpack .../402-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 254s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 254s Selecting previously unselected package r-cran-deldir. 254s Preparing to unpack .../403-r-cran-deldir_2.0-4-1build1_amd64.deb ... 254s Unpacking r-cran-deldir (2.0-4-1build1) ... 254s Selecting previously unselected package r-cran-desc. 254s Preparing to unpack .../404-r-cran-desc_1.4.3-1_all.deb ... 254s Unpacking r-cran-desc (1.4.3-1) ... 254s Selecting previously unselected package r-cran-diffobj. 254s Preparing to unpack .../405-r-cran-diffobj_0.3.5-1_amd64.deb ... 254s Unpacking r-cran-diffobj (0.3.5-1) ... 254s Selecting previously unselected package r-cran-dotcall64. 255s Preparing to unpack .../406-r-cran-dotcall64_1.2-1_amd64.deb ... 255s Unpacking r-cran-dotcall64 (1.2-1) ... 255s Selecting previously unselected package r-cran-fastdummies. 255s Preparing to unpack .../407-r-cran-fastdummies_1.7.5-1_all.deb ... 255s Unpacking r-cran-fastdummies (1.7.5-1) ... 255s Selecting previously unselected package r-cran-fitdistrplus. 255s Preparing to unpack .../408-r-cran-fitdistrplus_1.2-2-1_all.deb ... 255s Unpacking r-cran-fitdistrplus (1.2-2-1) ... 255s Selecting previously unselected package r-cran-gtools. 255s Preparing to unpack .../409-r-cran-gtools_3.9.5-1_amd64.deb ... 255s Unpacking r-cran-gtools (3.9.5-1) ... 255s Selecting previously unselected package r-cran-gdata. 255s Preparing to unpack .../410-r-cran-gdata_3.0.1-1_all.deb ... 255s Unpacking r-cran-gdata (3.0.1-1) ... 255s Selecting previously unselected package r-cran-ggridges. 255s Preparing to unpack .../411-r-cran-ggridges_0.5.6-1_all.deb ... 255s Unpacking r-cran-ggridges (0.5.6-1) ... 255s Selecting previously unselected package r-cran-goftest. 255s Preparing to unpack .../412-r-cran-goftest_1.2-3-1_amd64.deb ... 255s Unpacking r-cran-goftest (1.2-3-1) ... 255s Selecting previously unselected package r-cran-gplots. 255s Preparing to unpack .../413-r-cran-gplots_3.2.0-1_all.deb ... 255s Unpacking r-cran-gplots (3.2.0-1) ... 255s Selecting previously unselected package r-cran-rprojroot. 255s Preparing to unpack .../414-r-cran-rprojroot_2.0.4-2_all.deb ... 255s Unpacking r-cran-rprojroot (2.0.4-2) ... 255s Selecting previously unselected package r-cran-here. 255s Preparing to unpack .../415-r-cran-here_1.0.1-2_all.deb ... 255s Unpacking r-cran-here (1.0.1-2) ... 255s Selecting previously unselected package r-cran-rstudioapi. 255s Preparing to unpack .../416-r-cran-rstudioapi_0.17.1-1_all.deb ... 255s Unpacking r-cran-rstudioapi (0.17.1-1) ... 255s Selecting previously unselected package r-cran-htmltable. 255s Preparing to unpack .../417-r-cran-htmltable_2.4.3-1_all.deb ... 255s Unpacking r-cran-htmltable (2.4.3-1) ... 255s Selecting previously unselected package r-cran-jpeg. 255s Preparing to unpack .../418-r-cran-jpeg_0.1-10-1_amd64.deb ... 255s Unpacking r-cran-jpeg (0.1-10-1) ... 255s Selecting previously unselected package r-cran-interp. 255s Preparing to unpack .../419-r-cran-interp_1.1-6-1_amd64.deb ... 255s Unpacking r-cran-interp (1.1-6-1) ... 255s Selecting previously unselected package r-cran-latticeextra. 255s Preparing to unpack .../420-r-cran-latticeextra_0.6-30-1_all.deb ... 255s Unpacking r-cran-latticeextra (0.6-30-1) ... 255s Selecting previously unselected package r-cran-hmisc. 255s Preparing to unpack .../421-r-cran-hmisc_5.2-2-1_amd64.deb ... 255s Unpacking r-cran-hmisc (5.2-2-1) ... 255s Selecting previously unselected package r-cran-ica. 255s Preparing to unpack .../422-r-cran-ica_1.0-3-1_all.deb ... 255s Unpacking r-cran-ica (1.0-3-1) ... 255s Selecting previously unselected package r-cran-patchwork. 255s Preparing to unpack .../423-r-cran-patchwork_1.3.0-1_all.deb ... 255s Unpacking r-cran-patchwork (1.3.0-1) ... 255s Selecting previously unselected package r-cran-pbapply. 255s Preparing to unpack .../424-r-cran-pbapply_1.7-2-1_all.deb ... 255s Unpacking r-cran-pbapply (1.7-2-1) ... 255s Selecting previously unselected package r-cran-pkgbuild. 255s Preparing to unpack .../425-r-cran-pkgbuild_1.4.6-1_all.deb ... 255s Unpacking r-cran-pkgbuild (1.4.6-1) ... 255s Selecting previously unselected package r-cran-pkgload. 256s Preparing to unpack .../426-r-cran-pkgload_1.4.0-1_all.deb ... 256s Unpacking r-cran-pkgload (1.4.0-1) ... 256s Selecting previously unselected package r-cran-plotly. 256s Preparing to unpack .../427-r-cran-plotly_4.10.4+dfsg-2_all.deb ... 256s Unpacking r-cran-plotly (4.10.4+dfsg-2) ... 256s Selecting previously unselected package r-cran-polyclip. 256s Preparing to unpack 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260s Setting up r-cran-pkgbuild (1.4.6-1) ... 260s Setting up r-cran-hardhat (1.4.0+dfsg-1) ... 260s Setting up r-cran-rcppml (0.3.7-2) ... 260s Setting up r-cran-dplyr (1.1.4-4) ... 260s Setting up r-cran-rspectra (0.16-2-1) ... 260s Setting up r-cran-reformulas (0.4.0-1) ... 260s Setting up r-cran-gplots (3.2.0-1) ... 260s Setting up r-cran-uwot (0.2.3-1) ... 260s Setting up r-cran-progress (1.2.3-1) ... 260s Setting up r-cran-ttr (0.24.4-1) ... 260s Setting up r-cran-ranger (0.17.0-1) ... 260s Setting up r-cran-pheatmap (1.0.12-2build1) ... 260s Setting up r-cran-lubridate (1.9.4+dfsg-1) ... 260s Setting up r-cran-pkgload (1.4.0-1) ... 260s Setting up r-cran-r.utils (2.13.0-1) ... 260s Setting up r-cran-rocr (1.0-11-3) ... 260s Setting up r-cran-vroom (1.6.5-1) ... 260s Setting up r-base-dev (4.4.3-1) ... 260s Setting up r-cran-prodlim (2024.06.25-1) ... 260s Setting up r-cran-fitdistrplus (1.2-2-1) ... 260s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 260s Setting up r-bioc-sparsearray (1.6.2+dfsg-1) ... 260s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 260s Setting up r-cran-scattermore (1.2-1) ... 260s Setting up r-cran-cellranger (1.1.0-3) ... 260s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 260s Setting up r-cran-rpart (4.1.24-1) ... 260s Setting up r-cran-spatstat.random (3.3-2-1) ... 260s Setting up r-cran-latticeextra (0.6-30-1) ... 260s Setting up r-cran-textshaping (0.3.7-2) ... 260s Setting up r-cran-ipred (0.9-15-1) ... 260s Setting up r-cran-lme4 (1.1-36-1) ... 260s Setting up r-cran-viridis (0.6.5-1) ... 260s Setting up r-cran-testthat (3.2.3-1) ... 260s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 260s Setting up r-cran-bslib (0.8.0+dfsg-1) ... 260s Setting up r-cran-ragg (1.3.3-1) ... 260s Setting up r-cran-spatstat.explore (3.3-4-1) ... 260s Setting up r-cran-ggthemes (5.1.0-1) ... 260s Setting up r-cran-readr (2.1.5-1) ... 260s Setting up r-cran-ggrepel (0.9.6-1) ... 260s Setting up r-cran-tidyr (1.3.1-1) ... 260s Setting up r-cran-recipes (1.1.0+dfsg-1) ... 260s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 260s Setting up r-cran-smoother (1.3-1) ... 260s Setting up r-cran-ggridges (0.5.6-1) ... 260s Setting up r-cran-ggbeeswarm (0.7.2-1) ... 260s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 260s Setting up r-cran-cowplot (1.1.3+dfsg-1) ... 260s Setting up r-cran-sctransform (0.4.1-1) ... 260s Setting up r-cran-patchwork (1.3.0-1) ... 260s Setting up r-cran-readxl (1.4.4-1) ... 260s Setting up r-cran-ggplot.multistats (1.0.1-1) ... 260s Setting up r-cran-haven (2.5.4-1) ... 260s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 260s Setting up r-cran-caret (7.0-1+dfsg-1) ... 260s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 260s Setting up r-bioc-monocle (2.34.0-2) ... 260s Setting up r-cran-shinyjs (2.1.0-1) ... 260s Setting up r-cran-miniui (0.1.1.1-3build1) ... 260s Setting up r-cran-broom (1.0.7+dfsg-1) ... 260s Setting up r-cran-ggrastr (1.0.2-1) ... 260s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 260s Setting up r-bioc-beachmat (2.22.0+ds-2) ... 260s Setting up r-cran-conquer (1.3.3-1) ... 260s Setting up r-bioc-scaledmatrix (1.14.0+dfsg-2) ... 260s Setting up r-cran-crosstalk (1.2.1+dfsg-1) ... 260s Setting up r-cran-rio (1.2.3-1) ... 260s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 260s Setting up r-cran-quantreg (6.00-1) ... 260s Setting up r-bioc-biocsingular (1.22.0+ds-2) ... 260s Setting up r-cran-modelr (0.1.11-1) ... 260s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 260s Setting up r-cran-colourpicker (1.3.0+dfsg-1) ... 260s Setting up r-cran-doby (4.6.25-1) ... 260s Setting up r-bioc-singlecellexperiment (1.28.1+ds-2) ... 260s Setting up r-cran-htmltable (2.4.3-1) ... 260s Setting up r-cran-plotly (4.10.4+dfsg-2) ... 260s Setting up r-cran-pbkrtest (0.5.3-1) ... 260s Setting up r-cran-car (3.1-3-1) ... 260s Setting up r-bioc-scuttle (1.16.0+dfsg-3) ... 260s Setting up r-cran-vim (6.2.2+dfsg-1) ... 260s Setting up r-bioc-destiny (3.20.0-3) ... 260s Setting up r-cran-seurat (5.2.1-4) ... 260s Setting up r-cran-hmisc (5.2-2-1) ... 260s Setting up r-bioc-scater (1.34.1+ds-1) ... 260s Processing triggers for libc-bin (2.41-1ubuntu2) ... 260s Processing triggers for man-db (2.13.0-1) ... 262s Processing triggers for install-info (7.1.1-1) ... 264s autopkgtest [22:03:58]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 264s autopkgtest [22:03:58]: test pkg-r-autopkgtest: [----------------------- 264s Test: Try to load the R library monocle 264s 264s R version 4.4.3 (2025-02-28) -- "Trophy Case" 264s Copyright (C) 2025 The R Foundation for Statistical Computing 264s Platform: x86_64-pc-linux-gnu 264s 264s R is free software and comes with ABSOLUTELY NO WARRANTY. 264s You are welcome to redistribute it under certain conditions. 264s Type 'license()' or 'licence()' for distribution details. 264s 264s R is a collaborative project with many contributors. 264s Type 'contributors()' for more information and 264s 'citation()' on how to cite R or R packages in publications. 264s 264s Type 'demo()' for some demos, 'help()' for on-line help, or 264s 'help.start()' for an HTML browser interface to help. 264s Type 'q()' to quit R. 264s 264s > library('monocle') 264s Loading required package: Matrix 265s Loading required package: Biobase 265s Loading required package: BiocGenerics 265s 265s Attaching package: ‘BiocGenerics’ 265s 265s The following objects are masked from ‘package:stats’: 265s 265s IQR, mad, sd, var, xtabs 265s 265s The following objects are masked from ‘package:base’: 265s 265s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 265s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 265s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 265s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 265s Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff, 265s table, tapply, union, unique, unsplit, which.max, which.min 265s 265s Welcome to Bioconductor 265s 265s Vignettes contain introductory material; view with 265s 'browseVignettes()'. To cite Bioconductor, see 265s 'citation("Biobase")', and for packages 'citation("pkgname")'. 265s 265s Loading required package: ggplot2 265s Loading required package: VGAM 265s Loading required package: stats4 265s Loading required package: splines 265s Loading required package: DDRTree 265s Loading required package: irlba 266s > 266s > 266s Other tests are currently unsupported! 266s They will be progressively added. 266s autopkgtest [22:04:00]: test pkg-r-autopkgtest: -----------------------] 267s autopkgtest [22:04:01]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 267s pkg-r-autopkgtest PASS 267s autopkgtest [22:04:01]: @@@@@@@@@@@@@@@@@@@@ summary 267s pkg-r-autopkgtest PASS 272s nova [W] Skipping flock for amd64 272s Creating nova instance adt-plucky-amd64-r-bioc-monocle-20250315-215933-juju-7f2275-prod-proposed-migration-environment-15-bcae2fb0-630e-419e-bd46-caea504b32ac from image adt/ubuntu-plucky-amd64-server-20250304.img (UUID 9c7d4da5-d95f-4c85-ac1f-51eb37e75c4c)... 272s nova [W] Timed out waiting for 4e3c897e-7479-44df-8795-3e146071258b to get deleted.