0s autopkgtest [21:59:30]: starting date and time: 2025-03-15 21:59:30+0000 0s autopkgtest [21:59:30]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [21:59:30]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.3rfmt3n7/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-bioc-lpsymphony --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@lcy02-4.secgroup --name adt-plucky-amd64-r-bioc-lpsymphony-20250315-215929-juju-7f2275-prod-proposed-migration-environment-15-37b6bfa5-7fa1-42ba-a188-0a62634f6114 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 43s autopkgtest [22:00:13]: testbed dpkg architecture: amd64 44s autopkgtest [22:00:14]: testbed apt version: 2.9.31ubuntu1 44s autopkgtest [22:00:14]: @@@@@@@@@@@@@@@@@@@@ test bed setup 44s autopkgtest [22:00:14]: testbed release detected to be: None 44s autopkgtest [22:00:14]: updating testbed package index (apt update) 44s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 44s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 44s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 44s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 44s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [369 kB] 44s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [14.5 kB] 44s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [44.1 kB] 44s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [67.4 kB] 44s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [85.7 kB] 44s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 c-n-f Metadata [1852 B] 44s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 c-n-f Metadata [116 B] 44s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [342 kB] 44s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [174 kB] 44s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 c-n-f Metadata [15.3 kB] 44s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [8544 B] 44s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [16.1 kB] 44s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 c-n-f Metadata [628 B] 45s Fetched 1265 kB in 0s (5644 kB/s) 45s Reading package lists... 45s + lsb_release --codename --short 46s + RELEASE=plucky 46s + cat 46s + [ plucky != trusty ] 46s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 46s Reading package lists... 46s Building dependency tree... 46s Reading state information... 46s Calculating upgrade... 46s Calculating upgrade... 46s The following package was automatically installed and is no longer required: 46s libnl-genl-3-200 46s Use 'sudo apt autoremove' to remove it. 46s The following NEW packages will be installed: 46s bpftool libdebuginfod-common libdebuginfod1t64 linux-headers-6.14.0-10 46s linux-headers-6.14.0-10-generic linux-image-6.14.0-10-generic 46s linux-modules-6.14.0-10-generic linux-modules-extra-6.14.0-10-generic 46s linux-perf linux-tools-6.14.0-10 linux-tools-6.14.0-10-generic pnp.ids 46s The following packages will be upgraded: 46s apparmor apt apt-utils binutils binutils-common binutils-x86-64-linux-gnu 46s cloud-init cloud-init-base curl dosfstools fwupd gir1.2-girepository-2.0 46s gir1.2-glib-2.0 htop hwdata libapparmor1 libapt-pkg7.0 libaudit-common 46s libaudit1 libbinutils libbrotli1 libcap-ng0 libctf-nobfd0 libctf0 46s libcurl3t64-gnutls libcurl4t64 libestr0 libfwupd3 libgirepository-1.0-1 46s libglib2.0-0t64 libglib2.0-data libgprofng0 libjemalloc2 liblz4-1 liblzma5 46s libmm-glib0 libncurses6 libncursesw6 libnl-3-200 libnl-genl-3-200 46s libnl-route-3-200 libpci3 libpython3-stdlib libpython3.13 46s libpython3.13-minimal libpython3.13-stdlib libselinux1 libsframe1 46s libsqlite3-0 libtinfo6 libxml2 linux-firmware linux-generic 46s linux-headers-generic linux-headers-virtual linux-image-generic 46s linux-image-virtual linux-libc-dev linux-tools-common linux-virtual 46s media-types ncurses-base ncurses-bin ncurses-term pci.ids pciutils 46s pinentry-curses python-apt-common python3 python3-apt python3-cffi-backend 46s python3-dbus python3-gi python3-jinja2 python3-lazr.uri python3-markupsafe 46s python3-minimal python3-systemd python3-yaml python3.13 python3.13-gdbm 46s python3.13-minimal rsync rsyslog strace xz-utils 46s 86 upgraded, 12 newly installed, 0 to remove and 0 not upgraded. 46s Need to get 807 MB of archives. 46s After this operation, 326 MB of additional disk space will be used. 46s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-bin amd64 6.5+20250216-2 [194 kB] 46s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-base all 6.5+20250216-2 [25.9 kB] 46s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-term all 6.5+20250216-2 [276 kB] 46s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 liblz4-1 amd64 1.10.0-4 [66.4 kB] 46s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma5 amd64 5.6.4-1 [157 kB] 46s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libapt-pkg7.0 amd64 2.9.33 [1138 kB] 46s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 apt amd64 2.9.33 [1439 kB] 47s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 apt-utils amd64 2.9.33 [222 kB] 47s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-minimal amd64 3.13.2-2 [27.7 kB] 47s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 python3 amd64 3.13.2-2 [24.0 kB] 47s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13 amd64 3.13.2-2 [2341 kB] 47s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 media-types all 13.0.0 [29.9 kB] 47s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses6 amd64 6.5+20250216-2 [126 kB] 47s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libncursesw6 amd64 6.5+20250216-2 [165 kB] 47s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libtinfo6 amd64 6.5+20250216-2 [119 kB] 47s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libsqlite3-0 amd64 3.46.1-2 [715 kB] 47s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.2-2 [735 kB] 47s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.2-2 [2365 kB] 47s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.2-2 [883 kB] 47s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.2-2 [2066 kB] 47s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.4 kB] 47s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 rsync amd64 3.4.1+ds1-3 [482 kB] 47s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod-common all 0.192-4 [15.4 kB] 47s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit-common all 1:4.0.2-2ubuntu2 [6628 B] 47s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libcap-ng0 amd64 0.8.5-4build1 [15.6 kB] 47s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit1 amd64 1:4.0.2-2ubuntu2 [54.0 kB] 47s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libselinux1 amd64 3.7-3ubuntu3 [87.3 kB] 47s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-girepository-2.0 amd64 1.83.4-1 [25.3 kB] 47s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-glib-2.0 amd64 2.84.0-1 [184 kB] 47s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-0t64 amd64 2.84.0-1 [1669 kB] 47s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libgirepository-1.0-1 amd64 1.83.4-1 [89.5 kB] 47s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libapparmor1 amd64 4.1.0~beta5-0ubuntu8 [55.0 kB] 47s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libestr0 amd64 0.1.11-2 [8340 B] 47s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-data all 2.84.0-1 [53.0 kB] 47s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2ubuntu5 [772 kB] 47s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 python-apt-common all 2.9.9build1 [21.3 kB] 47s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-apt amd64 2.9.9build1 [172 kB] 47s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-cffi-backend amd64 1.17.1-2build2 [96.6 kB] 47s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dbus amd64 1.3.2-5build5 [102 kB] 47s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-4build1 [252 kB] 47s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-yaml amd64 6.0.2-1build2 [144 kB] 47s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 rsyslog amd64 8.2412.0-2ubuntu2 [555 kB] 47s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 apparmor amd64 4.1.0~beta5-0ubuntu8 [701 kB] 47s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 dosfstools amd64 4.2-1.2 [95.0 kB] 47s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-genl-3-200 amd64 3.7.0-1 [12.2 kB] 47s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-route-3-200 amd64 3.7.0-1 [191 kB] 47s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-3-200 amd64 3.7.0-1 [64.9 kB] 47s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 pci.ids all 0.0~2025.03.09-1 [285 kB] 47s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 pciutils amd64 1:3.13.0-2 [110 kB] 47s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libpci3 amd64 1:3.13.0-2 [39.8 kB] 47s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 strace amd64 6.13+ds-1ubuntu1 [622 kB] 47s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 xz-utils amd64 5.6.4-1 [278 kB] 47s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libgprofng0 amd64 2.44-3ubuntu1 [886 kB] 47s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf0 amd64 2.44-3ubuntu1 [96.5 kB] 47s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf-nobfd0 amd64 2.44-3ubuntu1 [98.9 kB] 47s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-x86-64-linux-gnu amd64 2.44-3ubuntu1 [1108 kB] 47s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libbinutils amd64 2.44-3ubuntu1 [585 kB] 47s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils amd64 2.44-3ubuntu1 [208 kB] 47s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-common amd64 2.44-3ubuntu1 [215 kB] 47s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libsframe1 amd64 2.44-3ubuntu1 [14.8 kB] 47s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 hwdata all 0.393-3 [1562 B] 47s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 pnp.ids all 0.393-3 [29.5 kB] 47s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-common all 6.14.0-10.10 [295 kB] 47s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 bpftool amd64 7.6.0+6.14.0-10.10 [1147 kB] 47s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-markupsafe amd64 2.1.5-1build4 [13.4 kB] 47s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 47s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init-base all 25.1-0ubuntu3 [616 kB] 47s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libbrotli1 amd64 1.1.0-2build4 [365 kB] 47s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 curl amd64 8.12.1-3ubuntu1 [258 kB] 47s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4t64 amd64 8.12.1-3ubuntu1 [437 kB] 47s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl3t64-gnutls amd64 8.12.1-3ubuntu1 [432 kB] 47s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 fwupd amd64 2.0.6-4 [5408 kB] 47s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libfwupd3 amd64 2.0.6-4 [136 kB] 47s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libmm-glib0 amd64 1.23.4-0ubuntu3 [251 kB] 47s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 htop amd64 3.4.0-2 [195 kB] 47s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod1t64 amd64 0.192-4 [21.0 kB] 47s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libjemalloc2 amd64 5.3.0-3 [277 kB] 47s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-firmware amd64 20250310.git9e1370d3-0ubuntu1 [571 MB] 52s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-6.14.0-10-generic amd64 6.14.0-10.10 [41.2 MB] 53s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-6.14.0-10-generic amd64 6.14.0-10.10 [15.3 MB] 53s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-extra-6.14.0-10-generic amd64 6.14.0-10.10 [120 MB] 55s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-generic amd64 6.14.0-10.10 [1730 B] 55s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-generic amd64 6.14.0-10.10 [11.1 kB] 55s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-virtual amd64 6.14.0-10.10 [1722 B] 55s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-virtual amd64 6.14.0-10.10 [11.1 kB] 55s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-virtual amd64 6.14.0-10.10 [1642 B] 55s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10 all 6.14.0-10.10 [14.2 MB] 55s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10-generic amd64 6.14.0-10.10 [3915 kB] 55s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-generic amd64 6.14.0-10.10 [11.0 kB] 55s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-libc-dev amd64 6.14.0-10.10 [1723 kB] 55s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-perf amd64 6.14.0-10.10 [4122 kB] 55s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10 amd64 6.14.0-10.10 [1394 kB] 55s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10-generic amd64 6.14.0-10.10 [830 B] 55s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 pinentry-curses amd64 1.3.1-2ubuntu3 [42.3 kB] 55s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lazr.uri all 1.0.6-6 [13.7 kB] 55s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-systemd amd64 235-1build6 [43.9 kB] 55s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-gdbm amd64 3.13.2-2 [31.9 kB] 55s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init all 25.1-0ubuntu3 [2100 B] 56s Preconfiguring packages ... 56s Fetched 807 MB in 9s (91.4 MB/s) 56s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 56s Preparing to unpack .../ncurses-bin_6.5+20250216-2_amd64.deb ... 56s Unpacking ncurses-bin (6.5+20250216-2) over (6.5+20250216-1) ... 56s Setting up ncurses-bin (6.5+20250216-2) ... 56s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 56s Preparing to unpack .../ncurses-base_6.5+20250216-2_all.deb ... 56s Unpacking ncurses-base (6.5+20250216-2) over (6.5+20250216-1) ... 56s Setting up ncurses-base (6.5+20250216-2) ... 56s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 56s Preparing to unpack .../ncurses-term_6.5+20250216-2_all.deb ... 56s Unpacking ncurses-term (6.5+20250216-2) over (6.5+20250216-1) ... 57s Preparing to unpack .../liblz4-1_1.10.0-4_amd64.deb ... 57s Unpacking liblz4-1:amd64 (1.10.0-4) over (1.10.0-3) ... 57s Setting up liblz4-1:amd64 (1.10.0-4) ... 57s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 57s Preparing to unpack .../liblzma5_5.6.4-1_amd64.deb ... 57s Unpacking liblzma5:amd64 (5.6.4-1) over (5.6.3-1) ... 57s Setting up liblzma5:amd64 (5.6.4-1) ... 57s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 57s Preparing to unpack .../libapt-pkg7.0_2.9.33_amd64.deb ... 57s Unpacking libapt-pkg7.0:amd64 (2.9.33) over (2.9.31ubuntu1) ... 57s Setting up libapt-pkg7.0:amd64 (2.9.33) ... 57s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 57s Preparing to unpack .../archives/apt_2.9.33_amd64.deb ... 57s Unpacking apt (2.9.33) over (2.9.31ubuntu1) ... 57s Setting up apt (2.9.33) ... 58s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 58s Preparing to unpack .../apt-utils_2.9.33_amd64.deb ... 58s Unpacking apt-utils (2.9.33) over (2.9.31ubuntu1) ... 58s Preparing to unpack .../python3-minimal_3.13.2-2_amd64.deb ... 58s Unpacking python3-minimal (3.13.2-2) over (3.13.2-1) ... 58s Setting up python3-minimal (3.13.2-2) ... 58s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 58s Preparing to unpack .../0-python3_3.13.2-2_amd64.deb ... 58s Unpacking python3 (3.13.2-2) over (3.13.2-1) ... 58s Preparing to unpack .../1-libpython3.13_3.13.2-2_amd64.deb ... 58s Unpacking libpython3.13:amd64 (3.13.2-2) over (3.13.2-1) ... 58s Preparing to unpack .../2-media-types_13.0.0_all.deb ... 58s Unpacking media-types (13.0.0) over (12.0.0) ... 58s Preparing to unpack .../3-libncurses6_6.5+20250216-2_amd64.deb ... 58s Unpacking libncurses6:amd64 (6.5+20250216-2) over (6.5+20250216-1) ... 58s Preparing to unpack .../4-libncursesw6_6.5+20250216-2_amd64.deb ... 58s Unpacking libncursesw6:amd64 (6.5+20250216-2) over (6.5+20250216-1) ... 58s Preparing to unpack .../5-libtinfo6_6.5+20250216-2_amd64.deb ... 58s Unpacking libtinfo6:amd64 (6.5+20250216-2) over (6.5+20250216-1) ... 58s Setting up libtinfo6:amd64 (6.5+20250216-2) ... 59s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109138 files and directories currently installed.) 59s Preparing to unpack .../0-libsqlite3-0_3.46.1-2_amd64.deb ... 59s Unpacking libsqlite3-0:amd64 (3.46.1-2) over (3.46.1-1) ... 59s Preparing to unpack .../1-python3.13_3.13.2-2_amd64.deb ... 59s Unpacking python3.13 (3.13.2-2) over (3.13.2-1) ... 59s Preparing to unpack .../2-python3.13-minimal_3.13.2-2_amd64.deb ... 59s Unpacking python3.13-minimal (3.13.2-2) over (3.13.2-1) ... 59s Preparing to unpack .../3-libpython3.13-minimal_3.13.2-2_amd64.deb ... 59s Unpacking libpython3.13-minimal:amd64 (3.13.2-2) over (3.13.2-1) ... 59s Preparing to unpack .../4-libpython3.13-stdlib_3.13.2-2_amd64.deb ... 59s Unpacking libpython3.13-stdlib:amd64 (3.13.2-2) over (3.13.2-1) ... 59s Preparing to unpack .../5-libpython3-stdlib_3.13.2-2_amd64.deb ... 59s Unpacking libpython3-stdlib:amd64 (3.13.2-2) over (3.13.2-1) ... 59s Preparing to unpack .../6-rsync_3.4.1+ds1-3_amd64.deb ... 59s Unpacking rsync (3.4.1+ds1-3) over (3.4.1-0syncable1) ... 59s Selecting previously unselected package libdebuginfod-common. 59s Preparing to unpack .../7-libdebuginfod-common_0.192-4_all.deb ... 59s Unpacking libdebuginfod-common (0.192-4) ... 59s Preparing to unpack .../8-libaudit-common_1%3a4.0.2-2ubuntu2_all.deb ... 59s Unpacking libaudit-common (1:4.0.2-2ubuntu2) over (1:4.0.2-2ubuntu1) ... 59s Setting up libaudit-common (1:4.0.2-2ubuntu2) ... 59s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109147 files and directories currently installed.) 59s Preparing to unpack .../libcap-ng0_0.8.5-4build1_amd64.deb ... 59s Unpacking libcap-ng0:amd64 (0.8.5-4build1) over (0.8.5-4) ... 59s Setting up libcap-ng0:amd64 (0.8.5-4build1) ... 59s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109147 files and directories currently installed.) 59s Preparing to unpack .../libaudit1_1%3a4.0.2-2ubuntu2_amd64.deb ... 59s Unpacking libaudit1:amd64 (1:4.0.2-2ubuntu2) over (1:4.0.2-2ubuntu1) ... 60s Setting up libaudit1:amd64 (1:4.0.2-2ubuntu2) ... 60s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109147 files and directories currently installed.) 60s Preparing to unpack .../libselinux1_3.7-3ubuntu3_amd64.deb ... 60s Unpacking libselinux1:amd64 (3.7-3ubuntu3) over (3.7-3ubuntu2) ... 60s Setting up libselinux1:amd64 (3.7-3ubuntu3) ... 60s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109147 files and directories currently installed.) 60s Preparing to unpack .../00-gir1.2-girepository-2.0_1.83.4-1_amd64.deb ... 60s Unpacking gir1.2-girepository-2.0:amd64 (1.83.4-1) over (1.82.0-4) ... 60s Preparing to unpack .../01-gir1.2-glib-2.0_2.84.0-1_amd64.deb ... 60s Unpacking gir1.2-glib-2.0:amd64 (2.84.0-1) over (2.83.5-1) ... 60s Preparing to unpack .../02-libglib2.0-0t64_2.84.0-1_amd64.deb ... 60s Unpacking libglib2.0-0t64:amd64 (2.84.0-1) over (2.83.5-1) ... 60s Preparing to unpack .../03-libgirepository-1.0-1_1.83.4-1_amd64.deb ... 60s Unpacking libgirepository-1.0-1:amd64 (1.83.4-1) over (1.82.0-4) ... 60s Preparing to unpack .../04-libapparmor1_4.1.0~beta5-0ubuntu8_amd64.deb ... 60s Unpacking libapparmor1:amd64 (4.1.0~beta5-0ubuntu8) over (4.1.0~beta5-0ubuntu6) ... 60s Preparing to unpack .../05-libestr0_0.1.11-2_amd64.deb ... 60s Unpacking libestr0:amd64 (0.1.11-2) over (0.1.11-1build1) ... 60s Preparing to unpack .../06-libglib2.0-data_2.84.0-1_all.deb ... 60s Unpacking libglib2.0-data (2.84.0-1) over (2.83.5-1) ... 60s Preparing to unpack .../07-libxml2_2.12.7+dfsg+really2.9.14-0.2ubuntu5_amd64.deb ... 60s Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2ubuntu5) over (2.12.7+dfsg+really2.9.14-0.2ubuntu4) ... 60s Preparing to unpack .../08-python-apt-common_2.9.9build1_all.deb ... 60s Unpacking python-apt-common (2.9.9build1) over (2.9.9) ... 60s Preparing to unpack .../09-python3-apt_2.9.9build1_amd64.deb ... 60s Unpacking python3-apt (2.9.9build1) over (2.9.9) ... 60s Preparing to unpack .../10-python3-cffi-backend_1.17.1-2build2_amd64.deb ... 60s Unpacking python3-cffi-backend:amd64 (1.17.1-2build2) over (1.17.1-2build1) ... 60s Preparing to unpack .../11-python3-dbus_1.3.2-5build5_amd64.deb ... 60s Unpacking python3-dbus (1.3.2-5build5) over (1.3.2-5build4) ... 60s Preparing to unpack .../12-python3-gi_3.50.0-4build1_amd64.deb ... 61s Unpacking python3-gi (3.50.0-4build1) over (3.50.0-4) ... 61s Preparing to unpack .../13-python3-yaml_6.0.2-1build2_amd64.deb ... 61s Unpacking python3-yaml (6.0.2-1build2) over (6.0.2-1build1) ... 61s Preparing to unpack .../14-rsyslog_8.2412.0-2ubuntu2_amd64.deb ... 61s Unpacking rsyslog (8.2412.0-2ubuntu2) over (8.2412.0-2ubuntu1) ... 61s Preparing to unpack .../15-apparmor_4.1.0~beta5-0ubuntu8_amd64.deb ... 61s Unpacking apparmor (4.1.0~beta5-0ubuntu8) over (4.1.0~beta5-0ubuntu6) ... 62s Preparing to unpack .../16-dosfstools_4.2-1.2_amd64.deb ... 62s Unpacking dosfstools (4.2-1.2) over (4.2-1.1build1) ... 62s Preparing to unpack .../17-libnl-genl-3-200_3.7.0-1_amd64.deb ... 62s Unpacking libnl-genl-3-200:amd64 (3.7.0-1) over (3.7.0-0.3build2) ... 62s Preparing to unpack .../18-libnl-route-3-200_3.7.0-1_amd64.deb ... 62s Unpacking libnl-route-3-200:amd64 (3.7.0-1) over (3.7.0-0.3build2) ... 62s Preparing to unpack .../19-libnl-3-200_3.7.0-1_amd64.deb ... 62s Unpacking libnl-3-200:amd64 (3.7.0-1) over (3.7.0-0.3build2) ... 62s Preparing to unpack .../20-pci.ids_0.0~2025.03.09-1_all.deb ... 62s Unpacking pci.ids (0.0~2025.03.09-1) over (0.0~2025.02.12-1) ... 62s Preparing to unpack .../21-pciutils_1%3a3.13.0-2_amd64.deb ... 62s Unpacking pciutils (1:3.13.0-2) over (1:3.13.0-1) ... 62s Preparing to unpack .../22-libpci3_1%3a3.13.0-2_amd64.deb ... 62s Unpacking libpci3:amd64 (1:3.13.0-2) over (1:3.13.0-1) ... 62s Preparing to unpack .../23-strace_6.13+ds-1ubuntu1_amd64.deb ... 62s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 62s Preparing to unpack .../24-xz-utils_5.6.4-1_amd64.deb ... 62s Unpacking xz-utils (5.6.4-1) over (5.6.3-1) ... 62s Preparing to unpack .../25-libgprofng0_2.44-3ubuntu1_amd64.deb ... 62s Unpacking libgprofng0:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 62s Preparing to unpack .../26-libctf0_2.44-3ubuntu1_amd64.deb ... 62s Unpacking libctf0:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 62s Preparing to unpack .../27-libctf-nobfd0_2.44-3ubuntu1_amd64.deb ... 62s Unpacking libctf-nobfd0:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 62s Preparing to unpack .../28-binutils-x86-64-linux-gnu_2.44-3ubuntu1_amd64.deb ... 62s Unpacking binutils-x86-64-linux-gnu (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 62s Preparing to unpack .../29-libbinutils_2.44-3ubuntu1_amd64.deb ... 62s Unpacking libbinutils:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 63s Preparing to unpack .../30-binutils_2.44-3ubuntu1_amd64.deb ... 63s Unpacking binutils (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 63s Preparing to unpack .../31-binutils-common_2.44-3ubuntu1_amd64.deb ... 63s Unpacking binutils-common:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 63s Preparing to unpack .../32-libsframe1_2.44-3ubuntu1_amd64.deb ... 63s Unpacking libsframe1:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 63s Preparing to unpack .../33-hwdata_0.393-3_all.deb ... 63s Unpacking hwdata (0.393-3) over (0.393-1) ... 63s Selecting previously unselected package pnp.ids. 63s Preparing to unpack .../34-pnp.ids_0.393-3_all.deb ... 63s Unpacking pnp.ids (0.393-3) ... 63s Preparing to unpack .../35-linux-tools-common_6.14.0-10.10_all.deb ... 63s Unpacking linux-tools-common (6.14.0-10.10) over (6.12.0-16.16) ... 63s Selecting previously unselected package bpftool. 63s Preparing to unpack .../36-bpftool_7.6.0+6.14.0-10.10_amd64.deb ... 63s Unpacking bpftool (7.6.0+6.14.0-10.10) ... 63s Preparing to unpack .../37-python3-markupsafe_2.1.5-1build4_amd64.deb ... 63s Unpacking python3-markupsafe (2.1.5-1build4) over (2.1.5-1build3) ... 63s Preparing to unpack .../38-python3-jinja2_3.1.5-2ubuntu1_all.deb ... 63s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 63s Preparing to unpack .../39-cloud-init-base_25.1-0ubuntu3_all.deb ... 63s Unpacking cloud-init-base (25.1-0ubuntu3) over (25.1-0ubuntu2) ... 63s Preparing to unpack .../40-libbrotli1_1.1.0-2build4_amd64.deb ... 63s Unpacking libbrotli1:amd64 (1.1.0-2build4) over (1.1.0-2build3) ... 63s Preparing to unpack .../41-curl_8.12.1-3ubuntu1_amd64.deb ... 63s Unpacking curl (8.12.1-3ubuntu1) over (8.12.1-2ubuntu1) ... 63s Preparing to unpack .../42-libcurl4t64_8.12.1-3ubuntu1_amd64.deb ... 63s Unpacking libcurl4t64:amd64 (8.12.1-3ubuntu1) over (8.12.1-2ubuntu1) ... 64s Preparing to unpack .../43-libcurl3t64-gnutls_8.12.1-3ubuntu1_amd64.deb ... 64s Unpacking libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) over (8.12.1-2ubuntu1) ... 64s Preparing to unpack .../44-fwupd_2.0.6-4_amd64.deb ... 64s Unpacking fwupd (2.0.6-4) over (2.0.6-3) ... 64s Preparing to unpack .../45-libfwupd3_2.0.6-4_amd64.deb ... 64s Unpacking libfwupd3:amd64 (2.0.6-4) over (2.0.6-3) ... 64s Preparing to unpack .../46-libmm-glib0_1.23.4-0ubuntu3_amd64.deb ... 64s Unpacking libmm-glib0:amd64 (1.23.4-0ubuntu3) over (1.23.4-0ubuntu2) ... 64s Preparing to unpack .../47-htop_3.4.0-2_amd64.deb ... 64s Unpacking htop (3.4.0-2) over (3.3.0-5) ... 64s Selecting previously unselected package libdebuginfod1t64:amd64. 64s Preparing to unpack .../48-libdebuginfod1t64_0.192-4_amd64.deb ... 64s Unpacking libdebuginfod1t64:amd64 (0.192-4) ... 64s Preparing to unpack .../49-libjemalloc2_5.3.0-3_amd64.deb ... 64s Unpacking libjemalloc2:amd64 (5.3.0-3) over (5.3.0-2build1) ... 64s Preparing to unpack .../50-linux-firmware_20250310.git9e1370d3-0ubuntu1_amd64.deb ... 64s Unpacking linux-firmware (20250310.git9e1370d3-0ubuntu1) over (20250204.git0fd450ee-0ubuntu1) ... 67s Selecting previously unselected package linux-modules-6.14.0-10-generic. 67s Preparing to unpack .../51-linux-modules-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 67s Unpacking linux-modules-6.14.0-10-generic (6.14.0-10.10) ... 68s Selecting previously unselected package linux-image-6.14.0-10-generic. 68s Preparing to unpack .../52-linux-image-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 68s Unpacking linux-image-6.14.0-10-generic (6.14.0-10.10) ... 68s Selecting previously unselected package linux-modules-extra-6.14.0-10-generic. 68s Preparing to unpack .../53-linux-modules-extra-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 68s Unpacking linux-modules-extra-6.14.0-10-generic (6.14.0-10.10) ... 69s Preparing to unpack .../54-linux-generic_6.14.0-10.10_amd64.deb ... 69s Unpacking linux-generic (6.14.0-10.10) over (6.12.0-16.16+2) ... 69s Preparing to unpack .../55-linux-image-generic_6.14.0-10.10_amd64.deb ... 69s Unpacking linux-image-generic (6.14.0-10.10) over (6.12.0-16.16+2) ... 69s Preparing to unpack .../56-linux-virtual_6.14.0-10.10_amd64.deb ... 69s Unpacking linux-virtual (6.14.0-10.10) over (6.12.0-16.16+2) ... 69s Preparing to unpack .../57-linux-image-virtual_6.14.0-10.10_amd64.deb ... 69s Unpacking linux-image-virtual (6.14.0-10.10) over (6.12.0-16.16+2) ... 69s Preparing to unpack .../58-linux-headers-virtual_6.14.0-10.10_amd64.deb ... 69s Unpacking linux-headers-virtual (6.14.0-10.10) over (6.12.0-16.16+2) ... 69s Selecting previously unselected package linux-headers-6.14.0-10. 69s Preparing to unpack .../59-linux-headers-6.14.0-10_6.14.0-10.10_all.deb ... 69s Unpacking linux-headers-6.14.0-10 (6.14.0-10.10) ... 72s Selecting previously unselected package linux-headers-6.14.0-10-generic. 72s Preparing to unpack .../60-linux-headers-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 72s Unpacking linux-headers-6.14.0-10-generic (6.14.0-10.10) ... 73s Preparing to unpack .../61-linux-headers-generic_6.14.0-10.10_amd64.deb ... 73s Unpacking linux-headers-generic (6.14.0-10.10) over (6.12.0-16.16+2) ... 73s Preparing to unpack .../62-linux-libc-dev_6.14.0-10.10_amd64.deb ... 73s Unpacking linux-libc-dev:amd64 (6.14.0-10.10) over (6.12.0-16.16) ... 73s Selecting previously unselected package linux-perf. 73s Preparing to unpack .../63-linux-perf_6.14.0-10.10_amd64.deb ... 73s Unpacking linux-perf (6.14.0-10.10) ... 73s Selecting previously unselected package linux-tools-6.14.0-10. 73s Preparing to unpack .../64-linux-tools-6.14.0-10_6.14.0-10.10_amd64.deb ... 73s Unpacking linux-tools-6.14.0-10 (6.14.0-10.10) ... 73s Selecting previously unselected package linux-tools-6.14.0-10-generic. 73s Preparing to unpack .../65-linux-tools-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 73s Unpacking linux-tools-6.14.0-10-generic (6.14.0-10.10) ... 73s Preparing to unpack .../66-pinentry-curses_1.3.1-2ubuntu3_amd64.deb ... 73s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 73s Preparing to unpack .../67-python3-lazr.uri_1.0.6-6_all.deb ... 74s Unpacking python3-lazr.uri (1.0.6-6) over (1.0.6-5) ... 74s Preparing to unpack .../68-python3-systemd_235-1build6_amd64.deb ... 74s Unpacking python3-systemd (235-1build6) over (235-1build5) ... 74s Preparing to unpack .../69-python3.13-gdbm_3.13.2-2_amd64.deb ... 74s Unpacking python3.13-gdbm (3.13.2-2) over (3.13.2-1) ... 74s Preparing to unpack .../70-cloud-init_25.1-0ubuntu3_all.deb ... 74s Unpacking cloud-init (25.1-0ubuntu3) over (25.1-0ubuntu2) ... 74s Setting up linux-headers-6.14.0-10 (6.14.0-10.10) ... 74s Setting up media-types (13.0.0) ... 74s Installing new version of config file /etc/mime.types ... 74s Setting up linux-headers-6.14.0-10-generic (6.14.0-10.10) ... 74s Setting up libapparmor1:amd64 (4.1.0~beta5-0ubuntu8) ... 74s Setting up pci.ids (0.0~2025.03.09-1) ... 74s Setting up apt-utils (2.9.33) ... 74s Setting up libdebuginfod-common (0.192-4) ... 74s Setting up linux-firmware (20250310.git9e1370d3-0ubuntu1) ... 74s Setting up bpftool (7.6.0+6.14.0-10.10) ... 74s Setting up libestr0:amd64 (0.1.11-2) ... 74s Setting up libbrotli1:amd64 (1.1.0-2build4) ... 74s Setting up libsqlite3-0:amd64 (3.46.1-2) ... 74s Setting up dosfstools (4.2-1.2) ... 74s Setting up rsyslog (8.2412.0-2ubuntu2) ... 74s info: The user `syslog' is already a member of `adm'. 75s Setting up binutils-common:amd64 (2.44-3ubuntu1) ... 75s Setting up libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) ... 75s Setting up linux-libc-dev:amd64 (6.14.0-10.10) ... 75s Setting up libctf-nobfd0:amd64 (2.44-3ubuntu1) ... 75s Setting up linux-headers-generic (6.14.0-10.10) ... 75s Setting up libjemalloc2:amd64 (5.3.0-3) ... 75s Setting up libsframe1:amd64 (2.44-3ubuntu1) ... 75s Setting up libpython3.13-minimal:amd64 (3.13.2-2) ... 75s Setting up apparmor (4.1.0~beta5-0ubuntu8) ... 75s Installing new version of config file /etc/apparmor.d/openvpn ... 76s Reloading AppArmor profiles 77s Setting up libglib2.0-0t64:amd64 (2.84.0-1) ... 77s No schema files found: doing nothing. 77s Setting up libglib2.0-data (2.84.0-1) ... 77s Setting up libncurses6:amd64 (6.5+20250216-2) ... 77s Setting up strace (6.13+ds-1ubuntu1) ... 77s Setting up xz-utils (5.6.4-1) ... 77s Setting up gir1.2-glib-2.0:amd64 (2.84.0-1) ... 77s Setting up linux-modules-6.14.0-10-generic (6.14.0-10.10) ... 79s Setting up libncursesw6:amd64 (6.5+20250216-2) ... 79s Setting up libpci3:amd64 (1:3.13.0-2) ... 79s Setting up python-apt-common (2.9.9build1) ... 79s Setting up libmm-glib0:amd64 (1.23.4-0ubuntu3) ... 79s Setting up pnp.ids (0.393-3) ... 79s Setting up libnl-3-200:amd64 (3.7.0-1) ... 79s Setting up python3.13-minimal (3.13.2-2) ... 80s Setting up libgirepository-1.0-1:amd64 (1.83.4-1) ... 80s Setting up libbinutils:amd64 (2.44-3ubuntu1) ... 80s Setting up libpython3.13-stdlib:amd64 (3.13.2-2) ... 80s Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2ubuntu5) ... 80s Setting up rsync (3.4.1+ds1-3) ... 81s rsync.service is a disabled or a static unit not running, not starting it. 81s Setting up python3.13-gdbm (3.13.2-2) ... 81s Setting up libpython3-stdlib:amd64 (3.13.2-2) ... 81s Setting up ncurses-term (6.5+20250216-2) ... 81s Setting up libctf0:amd64 (2.44-3ubuntu1) ... 81s Setting up libpython3.13:amd64 (3.13.2-2) ... 81s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 81s Setting up libdebuginfod1t64:amd64 (0.192-4) ... 81s Setting up linux-headers-virtual (6.14.0-10.10) ... 81s Setting up libcurl4t64:amd64 (8.12.1-3ubuntu1) ... 81s Setting up python3.13 (3.13.2-2) ... 82s Setting up htop (3.4.0-2) ... 82s Setting up linux-image-6.14.0-10-generic (6.14.0-10.10) ... 84s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.12.0-16-generic 84s I: /boot/initrd.img.old is now a symlink to initrd.img-6.12.0-16-generic 84s I: /boot/vmlinuz is now a symlink to vmlinuz-6.14.0-10-generic 84s I: /boot/initrd.img is now a symlink to initrd.img-6.14.0-10-generic 84s Setting up libfwupd3:amd64 (2.0.6-4) ... 84s Setting up python3 (3.13.2-2) ... 84s Setting up python3-markupsafe (2.1.5-1build4) ... 84s Setting up linux-modules-extra-6.14.0-10-generic (6.14.0-10.10) ... 86s Setting up libnl-route-3-200:amd64 (3.7.0-1) ... 86s Setting up hwdata (0.393-3) ... 86s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 86s Setting up libgprofng0:amd64 (2.44-3ubuntu1) ... 86s Setting up linux-perf (6.14.0-10.10) ... 86s Setting up gir1.2-girepository-2.0:amd64 (1.83.4-1) ... 86s Setting up python3-gi (3.50.0-4build1) ... 86s Setting up pciutils (1:3.13.0-2) ... 86s Setting up libnl-genl-3-200:amd64 (3.7.0-1) ... 86s Setting up curl (8.12.1-3ubuntu1) ... 86s Setting up linux-image-virtual (6.14.0-10.10) ... 86s Setting up linux-tools-common (6.14.0-10.10) ... 86s Setting up fwupd (2.0.6-4) ... 87s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 87s fwupd.service is a disabled or a static unit not running, not starting it. 87s Setting up python3-systemd (235-1build6) ... 87s Setting up python3-cffi-backend:amd64 (1.17.1-2build2) ... 87s Setting up binutils-x86-64-linux-gnu (2.44-3ubuntu1) ... 87s Setting up linux-image-generic (6.14.0-10.10) ... 87s Setting up python3-dbus (1.3.2-5build5) ... 87s Setting up linux-tools-6.14.0-10 (6.14.0-10.10) ... 87s Setting up linux-generic (6.14.0-10.10) ... 87s Setting up python3-apt (2.9.9build1) ... 87s Setting up python3-yaml (6.0.2-1build2) ... 87s Setting up python3-lazr.uri (1.0.6-6) ... 88s Setting up binutils (2.44-3ubuntu1) ... 88s Setting up cloud-init-base (25.1-0ubuntu3) ... 89s Setting up linux-virtual (6.14.0-10.10) ... 89s Setting up linux-tools-6.14.0-10-generic (6.14.0-10.10) ... 89s Setting up cloud-init (25.1-0ubuntu3) ... 89s Processing triggers for systemd (257.3-1ubuntu3) ... 89s Processing triggers for man-db (2.13.0-1) ... 91s Processing triggers for dbus (1.16.2-1ubuntu1) ... 91s Processing triggers for libc-bin (2.41-1ubuntu1) ... 91s Processing triggers for initramfs-tools (0.146ubuntu1) ... 91s update-initramfs: Generating /boot/initrd.img-6.12.0-16-generic 91s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 101s Processing triggers for linux-image-6.14.0-10-generic (6.14.0-10.10) ... 101s /etc/kernel/postinst.d/initramfs-tools: 101s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 101s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 111s /etc/kernel/postinst.d/zz-update-grub: 111s Sourcing file `/etc/default/grub' 111s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 111s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 111s Generating grub configuration file ... 111s Found linux image: /boot/vmlinuz-6.14.0-10-generic 111s Found initrd image: /boot/initrd.img-6.14.0-10-generic 111s Found linux image: /boot/vmlinuz-6.12.0-16-generic 111s Found initrd image: /boot/initrd.img-6.12.0-16-generic 111s Found linux image: /boot/vmlinuz-6.11.0-8-generic 111s Found initrd image: /boot/initrd.img-6.11.0-8-generic 111s Warning: os-prober will not be executed to detect other bootable partitions. 111s Systems on them will not be added to the GRUB boot configuration. 111s Check GRUB_DISABLE_OS_PROBER documentation entry. 111s Adding boot menu entry for UEFI Firmware Settings ... 112s done 112s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 112s + /usr/lib/apt/apt-helper analyze-pattern ?true 112s + uname -r 112s + sed s/\./\\./g 112s + running_kernel_pattern=^linux-.*6\.12\.0-16-generic.* 112s + apt list ?obsolete 112s + tail -n+2 112s + grep -v ^linux-.*6\.12\.0-16-generic.*+ 112s cut -d/ -f1 113s + obsolete_pkgs=linux-headers-6.11.0-8-generic 113s linux-headers-6.11.0-8 113s linux-headers-6.12.0-16 113s linux-image-6.11.0-8-generic 113s linux-modules-6.11.0-8-generic 113s linux-tools-6.11.0-8-generic 113s linux-tools-6.11.0-8 113s linux-tools-6.12.0-16 113s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove linux-headers-6.11.0-8-generic linux-headers-6.11.0-8 linux-headers-6.12.0-16 linux-image-6.11.0-8-generic linux-modules-6.11.0-8-generic linux-tools-6.11.0-8-generic linux-tools-6.11.0-8 linux-tools-6.12.0-16 113s Reading package lists... 114s Building dependency tree... 114s Reading state information... 114s Solving dependencies... 114s The following packages will be REMOVED: 114s libnl-genl-3-200* libnsl2* libpython3.12-minimal* libpython3.12-stdlib* 114s libpython3.12t64* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 114s linux-headers-6.12.0-16* linux-headers-6.12.0-16-generic* 114s linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic* 114s linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic* linux-tools-6.12.0-16* 114s linux-tools-6.12.0-16-generic* 114s 0 upgraded, 0 newly installed, 15 to remove and 5 not upgraded. 114s After this operation, 371 MB disk space will be freed. 114s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 148643 files and directories currently installed.) 114s Removing libnl-genl-3-200:amd64 (3.7.0-1) ... 114s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 114s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 114s Removing libpython3.12t64:amd64 (3.12.9-1) ... 114s Removing libpython3.12-stdlib:amd64 (3.12.9-1) ... 115s Removing libnsl2:amd64 (1.3.0-3build3) ... 115s Removing libpython3.12-minimal:amd64 (3.12.9-1) ... 115s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 115s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 117s Removing linux-headers-6.12.0-16-generic (6.12.0-16.16) ... 118s Removing linux-headers-6.12.0-16 (6.12.0-16.16) ... 120s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 120s /etc/kernel/postrm.d/initramfs-tools: 120s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 120s /etc/kernel/postrm.d/zz-update-grub: 120s Sourcing file `/etc/default/grub' 120s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 120s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 120s Generating grub configuration file ... 120s Found linux image: /boot/vmlinuz-6.14.0-10-generic 120s Found initrd image: /boot/initrd.img-6.14.0-10-generic 120s Found linux image: /boot/vmlinuz-6.12.0-16-generic 120s Found initrd image: /boot/initrd.img-6.12.0-16-generic 120s Warning: os-prober will not be executed to detect other bootable partitions. 120s Systems on them will not be added to the GRUB boot configuration. 120s Check GRUB_DISABLE_OS_PROBER documentation entry. 120s Adding boot menu entry for UEFI Firmware Settings ... 120s done 121s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 121s Removing linux-tools-6.12.0-16-generic (6.12.0-16.16) ... 121s Removing linux-tools-6.12.0-16 (6.12.0-16.16) ... 121s Processing triggers for libc-bin (2.41-1ubuntu1) ... 121s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84830 files and directories currently installed.) 121s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 121s Purging configuration files for libpython3.12-minimal:amd64 (3.12.9-1) ... 121s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 121s + grep -q trusty /etc/lsb-release 121s + [ ! -d /usr/share/doc/unattended-upgrades ] 121s + [ ! -d /usr/share/doc/lxd ] 121s + [ ! -d /usr/share/doc/lxd-client ] 121s + [ ! -d /usr/share/doc/snapd ] 121s + type iptables 121s + cat 121s + chmod 755 /etc/rc.local 121s + . /etc/rc.local 121s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 121s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 121s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 121s + uname -m 121s + [ x86_64 = ppc64le ] 121s + [ -d /run/systemd/system ] 121s + systemd-detect-virt --quiet --vm 121s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 121s + cat 121s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 121s + echo COMPRESS=lz4 121s autopkgtest [22:01:31]: upgrading testbed (apt dist-upgrade and autopurge) 121s Reading package lists... 121s Building dependency tree... 121s Reading state information... 122s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 122s Starting 2 pkgProblemResolver with broken count: 0 122s Done 123s Entering ResolveByKeep 123s 123s Calculating upgrade... 123s The following packages will be upgraded: 123s libc-bin libc-dev-bin libc6 libc6-dev locales 123s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 123s Need to get 10.5 MB of archives. 123s After this operation, 1024 B of additional disk space will be used. 123s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6-dev amd64 2.41-1ubuntu2 [2183 kB] 123s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-dev-bin amd64 2.41-1ubuntu2 [24.7 kB] 123s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6 amd64 2.41-1ubuntu2 [3327 kB] 124s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-bin amd64 2.41-1ubuntu2 [700 kB] 124s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 locales all 2.41-1ubuntu2 [4246 kB] 124s Preconfiguring packages ... 124s Fetched 10.5 MB in 0s (43.1 MB/s) 124s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84827 files and directories currently installed.) 124s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_amd64.deb ... 124s Unpacking libc6-dev:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 124s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_amd64.deb ... 124s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 124s Preparing to unpack .../libc6_2.41-1ubuntu2_amd64.deb ... 124s Unpacking libc6:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 125s Setting up libc6:amd64 (2.41-1ubuntu2) ... 125s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84827 files and directories currently installed.) 125s Preparing to unpack .../libc-bin_2.41-1ubuntu2_amd64.deb ... 125s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 125s Setting up libc-bin (2.41-1ubuntu2) ... 125s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84827 files and directories currently installed.) 125s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 125s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 125s Setting up locales (2.41-1ubuntu2) ... 126s Generating locales (this might take a while)... 127s en_US.UTF-8... done 127s Generation complete. 127s Setting up libc-dev-bin (2.41-1ubuntu2) ... 127s Setting up libc6-dev:amd64 (2.41-1ubuntu2) ... 127s Processing triggers for man-db (2.13.0-1) ... 128s Processing triggers for systemd (257.3-1ubuntu3) ... 129s Reading package lists... 129s Building dependency tree... 129s Reading state information... 130s Starting pkgProblemResolver with broken count: 0 130s Starting 2 pkgProblemResolver with broken count: 0 130s Done 130s Solving dependencies... 130s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 130s autopkgtest [22:01:40]: rebooting testbed after setup commands that affected boot 134s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 146s autopkgtest [22:01:56]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 16:07:00 UTC 2025 147s autopkgtest [22:01:57]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-lpsymphony 147s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-lpsymphony 1.34.0+dfsg-2 (dsc) [2178 B] 147s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-lpsymphony 1.34.0+dfsg-2 (tar) [295 kB] 147s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-lpsymphony 1.34.0+dfsg-2 (diff) [6692 B] 148s gpgv: Signature made Sat Jan 11 16:54:41 2025 UTC 148s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 148s gpgv: issuer "crusoe@debian.org" 148s gpgv: Can't check signature: No public key 148s dpkg-source: warning: cannot verify inline signature for ./r-bioc-lpsymphony_1.34.0+dfsg-2.dsc: no acceptable signature found 148s autopkgtest [22:01:58]: testing package r-bioc-lpsymphony version 1.34.0+dfsg-2 148s autopkgtest [22:01:58]: build not needed 150s autopkgtest [22:02:00]: test pkg-r-autopkgtest: preparing testbed 150s Reading package lists... 150s Building dependency tree... 150s Reading state information... 150s Starting pkgProblemResolver with broken count: 0 151s Starting 2 pkgProblemResolver with broken count: 0 151s Done 151s The following NEW packages will be installed: 151s build-essential coinor-libcgl1 coinor-libclp1 coinor-libcoinutils3v5 151s coinor-libosi1v5 coinor-libsymphony3 cpp cpp-14 cpp-14-x86-64-linux-gnu 151s cpp-x86-64-linux-gnu dctrl-tools fontconfig fontconfig-config 151s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 151s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-14 151s g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 151s gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-14 151s gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools 151s javascript-common libasan8 libbibtex-parser-perl libblas-dev libblas3 151s libbz2-dev libcairo2 libcc1-0 libdatrie1 libdeflate-dev libdeflate0 151s libfontconfig1 libgcc-14-dev libgfortran-14-dev libgfortran5 libgomp1 151s libgraphite2-3 libharfbuzz0b libhwasan0 libice6 libicu-dev libio-string-perl 151s libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 151s libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 151s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 151s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 151s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 151s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 151s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4 151s liblsan0 liblua5.4-0 liblzma-dev libmpc3 libmpfi0 libncurses-dev 151s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 151s libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 151s libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libptexenc1 libquadmath0 151s libreadline-dev libsharpyuv0 libsm6 libstdc++-14-dev libsynctex2 libtcl8.6 151s libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev 151s libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 151s libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6t64 libzzip-0-13t64 151s littler node-bootstrap-sass node-html5shiv node-normalize.css pandoc 151s pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 151s r-bioc-biocgenerics r-bioc-biocstyle r-bioc-biocversion r-bioc-lpsymphony 151s r-cran-base64enc r-cran-biocmanager r-cran-bookdown r-cran-brio r-cran-bslib 151s r-cran-cachem r-cran-callr r-cran-cli r-cran-commonmark r-cran-crayon 151s r-cran-desc r-cran-diffobj r-cran-digest r-cran-evaluate r-cran-fastmap 151s r-cran-fontawesome r-cran-fs r-cran-glue r-cran-highr r-cran-htmltools 151s r-cran-httpuv r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-later 151s r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-memoise r-cran-mime 151s r-cran-pkgbuild r-cran-pkgkitten r-cran-pkgload r-cran-praise 151s r-cran-processx r-cran-promises r-cran-ps r-cran-r6 r-cran-rappdirs 151s r-cran-rcpp r-cran-rlang r-cran-rmarkdown r-cran-rprojroot r-cran-sass 151s r-cran-shiny r-cran-sourcetools r-cran-testthat r-cran-tinytex r-cran-waldo 151s r-cran-withr r-cran-xfun r-cran-xtable r-cran-yaml t1utils tex-common 151s texlive-base texlive-bibtex-extra texlive-binaries texlive-latex-base unzip 151s x11-common xdg-utils zip zlib1g-dev 151s 0 upgraded, 212 newly installed, 0 to remove and 0 not upgraded. 151s Need to get 335 MB of archives. 151s After this operation, 1056 MB of additional disk space will be used. 151s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 151s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 151s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [11.9 MB] 152s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-17ubuntu3 [1030 B] 152s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [5586 B] 152s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.2.0-1ubuntu1 [22.4 kB] 152s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 15-20250222-0ubuntu1 [47.0 kB] 152s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 15-20250222-0ubuntu1 [148 kB] 152s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 15-20250222-0ubuntu1 [28.6 kB] 152s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 15-20250222-0ubuntu1 [3055 kB] 152s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 15-20250222-0ubuntu1 [1355 kB] 152s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 15-20250222-0ubuntu1 [2756 kB] 152s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 15-20250222-0ubuntu1 [1205 kB] 152s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 15-20250222-0ubuntu1 [1677 kB] 152s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 15-20250222-0ubuntu1 [152 kB] 152s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-17ubuntu3 [2816 kB] 152s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [23.3 MB] 152s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-17ubuntu3 [536 kB] 152s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1208 B] 152s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.2.0-1ubuntu1 [5004 B] 152s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-17ubuntu3 [2486 kB] 152s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [13.4 MB] 153s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-17ubuntu3 [21.8 kB] 153s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [968 B] 153s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.2.0-1ubuntu1 [1100 B] 153s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 153s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 dctrl-tools amd64 2.24-3build3 [106 kB] 153s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 153s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 153s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-2ubuntu1 [37.4 kB] 153s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-2ubuntu1 [164 kB] 153s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-2ubuntu1 [180 kB] 153s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 153s Get:34 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 153s Get:35 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-lmodern all 2.005-1 [4799 kB] 153s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 153s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 15-20250222-0ubuntu1 [919 kB] 153s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran-14-dev amd64 14.2.0-17ubuntu3 [966 kB] 153s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [12.6 MB] 153s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14 amd64 14.2.0-17ubuntu3 [13.6 kB] 153s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1022 B] 153s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran amd64 4:14.2.0-1ubuntu1 [1174 B] 153s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 icu-devtools amd64 76.1-1ubuntu2 [237 kB] 153s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 12 [5216 B] 153s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libio-string-perl all 1.08-4 [11.1 kB] 153s Get:46 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblatex-tounicode-perl all 0.55-1 [28.8 kB] 153s Get:47 http://ftpmaster.internal/ubuntu plucky/universe amd64 libbibtex-parser-perl all 1.05+dfsg-1 [16.5 kB] 153s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 153s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas-dev amd64 3.12.1-2 [338 kB] 153s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libbz2-dev amd64 1.0.8-6 [33.8 kB] 153s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 153s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 153s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 153s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 153s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 153s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 153s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB] 153s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate-dev amd64 1.23-1 [71.7 kB] 153s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 153s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB] 153s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 153s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 153s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 libicu-dev amd64 76.1-1ubuntu2 [12.6 MB] 153s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 153s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8-dev amd64 2.1.5-3ubuntu2 [324 kB] 153s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 153s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 153s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 153s Get:69 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 153s Get:70 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 153s Get:71 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 153s Get:72 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 153s Get:73 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 153s Get:74 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 153s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 153s Get:76 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 153s Get:77 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 153s Get:78 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 153s Get:79 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 153s Get:80 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 153s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 153s Get:82 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 153s Get:83 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 153s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 libkpathsea6 amd64 2024.20240313.70630+ds-6 [67.3 kB] 153s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 153s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack-dev amd64 3.12.1-2 [6489 kB] 153s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 153s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 liblua5.4-0 amd64 5.4.7-1 [196 kB] 153s Get:89 http://ftpmaster.internal/ubuntu plucky/universe amd64 libmpfi0 amd64 1.5.4+ds-4 [35.5 kB] 153s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses-dev amd64 6.5+20250216-2 [424 kB] 153s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 153s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 153s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.56.2-1 [255 kB] 153s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.56.2-1 [52.6 kB] 153s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.56.2-1 [29.1 kB] 153s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB] 153s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB] 153s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.45-1 [268 kB] 153s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-32-0 amd64 10.45-1 [251 kB] 153s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-posix3 amd64 10.45-1 [7204 B] 153s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-dev amd64 10.45-1 [908 kB] 153s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libpkgconf3 amd64 1.8.1-4 [32.3 kB] 153s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 153s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libpng-dev amd64 1.6.47-1 [298 kB] 153s Get:105 http://ftpmaster.internal/ubuntu plucky/universe amd64 libpotrace0 amd64 1.16-2build1 [17.7 kB] 153s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libptexenc1 amd64 2024.20240313.70630+ds-6 [43.7 kB] 153s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libreadline-dev amd64 8.2-6 [184 kB] 153s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 153s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 153s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 libsynctex2 amd64 2024.20240313.70630+ds-6 [62.5 kB] 153s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB] 153s Get:112 http://ftpmaster.internal/ubuntu plucky/universe amd64 libteckit0 amd64 2.5.12+ds1-1 [411 kB] 153s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libtexlua53-5 amd64 2024.20240313.70630+ds-6 [145 kB] 153s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 153s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 153s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 153s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 153s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 153s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB] 153s Get:120 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 153s Get:121 http://ftpmaster.internal/ubuntu plucky/main amd64 libxmu6 amd64 2:1.1.3-3build2 [47.6 kB] 153s Get:122 http://ftpmaster.internal/ubuntu plucky/main amd64 libxpm4 amd64 1:3.5.17-1build2 [36.5 kB] 153s Get:123 http://ftpmaster.internal/ubuntu plucky/main amd64 libxaw7 amd64 2:1.0.16-1 [207 kB] 153s Get:124 http://ftpmaster.internal/ubuntu plucky/main amd64 libxi6 amd64 2:1.8.2-1 [32.4 kB] 153s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 libzzip-0-13t64 amd64 0.13.78+dfsg.1-0.1 [30.0 kB] 153s Get:126 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu2 [185 kB] 153s Get:127 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 153s Get:128 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 153s Get:129 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.3-1 [28.9 MB] 154s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-2 [96.6 kB] 154s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-2 [2554 B] 154s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 154s Get:133 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 154s Get:134 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 154s Get:135 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 154s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc amd64 3.1.11.1+ds-2 [27.2 MB] 154s Get:137 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma-dev amd64 5.6.4-1 [189 kB] 154s Get:138 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf-bin amd64 1.8.1-4 [21.6 kB] 154s Get:139 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf amd64 1.8.1-4 [16.8 kB] 154s Get:140 http://ftpmaster.internal/ubuntu plucky/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3 [193 kB] 154s Get:141 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-dev all 4.4.3-1 [4176 B] 154s Get:142 http://ftpmaster.internal/ubuntu plucky/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 154s Get:143 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 154s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 154s Get:145 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB] 154s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 154s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.5-1 [1719 kB] 154s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 154s Get:149 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 1.0.3-1 [114 kB] 154s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xfun amd64 0.51+dfsg-1 [574 kB] 154s Get:151 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 154s Get:152 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB] 154s Get:153 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 154s Get:154 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 154s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 154s Get:156 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 154s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB] 154s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB] 154s Get:159 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 154s Get:160 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 154s Get:161 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 154s Get:162 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 154s Get:163 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB] 154s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB] 154s Get:165 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 154s Get:166 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 154s Get:167 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 155s Get:168 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 155s Get:169 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tinytex all 0.56-1 [148 kB] 155s Get:170 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-modernizr all 3.13.0-0.1 [101 kB] 155s Get:171 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 155s Get:172 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.14-1 [1998 kB] 155s Get:173 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB] 155s Get:174 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 155s Get:175 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB] 155s Get:176 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 155s Get:177 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 155s Get:178 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 155s Get:179 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB] 155s Get:180 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 155s Get:181 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.2-2 [137 kB] 155s Get:182 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 155s Get:183 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 155s Get:184 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 155s Get:185 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bookdown all 0.42+dfsg-1 [1409 kB] 155s Get:186 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 155s Get:187 http://ftpmaster.internal/ubuntu plucky/universe amd64 tex-common all 6.19 [29.8 kB] 155s Get:188 http://ftpmaster.internal/ubuntu plucky/main amd64 t1utils amd64 1.41-4build3 [61.3 kB] 155s Get:189 http://ftpmaster.internal/ubuntu plucky/universe amd64 texlive-binaries amd64 2024.20240313.70630+ds-6 [9789 kB] 155s Get:190 http://ftpmaster.internal/ubuntu plucky/universe amd64 texlive-base all 2024.20250114-1 [22.5 MB] 155s Get:191 http://ftpmaster.internal/ubuntu plucky/universe amd64 texlive-latex-base all 2024.20250114-1 [1264 kB] 155s Get:192 http://ftpmaster.internal/ubuntu plucky/universe amd64 texlive-bibtex-extra all 2024.20250114-1 [79.5 MB] 156s Get:193 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocversion all 3.20.0-2 [11.1 kB] 156s Get:194 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocstyle all 2.34.0+dfsg-1 [451 kB] 156s Get:195 http://ftpmaster.internal/ubuntu plucky/universe amd64 coinor-libcoinutils3v5 amd64 2.11.11+ds-5 [580 kB] 156s Get:196 http://ftpmaster.internal/ubuntu plucky/universe amd64 coinor-libosi1v5 amd64 0.108.10+ds-2 [307 kB] 156s Get:197 http://ftpmaster.internal/ubuntu plucky/universe amd64 coinor-libclp1 amd64 1.17.10+ds-1 [1010 kB] 156s Get:198 http://ftpmaster.internal/ubuntu plucky/universe amd64 coinor-libcgl1 amd64 0.60.9+ds-1 [483 kB] 156s Get:199 http://ftpmaster.internal/ubuntu plucky/universe amd64 coinor-libsymphony3 amd64 5.6.17+dfsg-1 [290 kB] 156s Get:200 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-lpsymphony amd64 1.34.0+dfsg-2 [290 kB] 156s Get:201 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 156s Get:202 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ps amd64 1.9.0-1 [408 kB] 156s Get:203 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-processx amd64 3.8.6-1 [365 kB] 156s Get:204 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 156s Get:205 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 156s Get:206 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 156s Get:207 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgbuild all 1.4.6-1 [213 kB] 156s Get:208 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rprojroot all 2.0.4-2 [125 kB] 156s Get:209 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgload all 1.4.0-1 [247 kB] 156s Get:210 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 156s Get:211 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-waldo all 0.6.1-2 [150 kB] 156s Get:212 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-testthat amd64 3.2.3-1 [1651 kB] 157s Preconfiguring packages ... 157s Fetched 335 MB in 5s (65.4 MB/s) 157s Selecting previously unselected package libisl23:amd64. 157s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84827 files and directories currently installed.) 157s Preparing to unpack .../000-libisl23_0.27-1_amd64.deb ... 157s Unpacking libisl23:amd64 (0.27-1) ... 157s Selecting previously unselected package libmpc3:amd64. 157s Preparing to unpack .../001-libmpc3_1.3.1-1build2_amd64.deb ... 157s Unpacking libmpc3:amd64 (1.3.1-1build2) ... 157s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 157s Preparing to unpack .../002-cpp-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 157s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 158s Selecting previously unselected package cpp-14. 158s Preparing to unpack .../003-cpp-14_14.2.0-17ubuntu3_amd64.deb ... 158s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 158s Selecting previously unselected package cpp-x86-64-linux-gnu. 158s Preparing to unpack .../004-cpp-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 158s Unpacking cpp-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 158s Selecting previously unselected package cpp. 158s Preparing to unpack .../005-cpp_4%3a14.2.0-1ubuntu1_amd64.deb ... 158s Unpacking cpp (4:14.2.0-1ubuntu1) ... 158s Selecting previously unselected package libcc1-0:amd64. 158s Preparing to unpack .../006-libcc1-0_15-20250222-0ubuntu1_amd64.deb ... 158s Unpacking libcc1-0:amd64 (15-20250222-0ubuntu1) ... 158s Selecting previously unselected package libgomp1:amd64. 158s Preparing to unpack .../007-libgomp1_15-20250222-0ubuntu1_amd64.deb ... 158s Unpacking libgomp1:amd64 (15-20250222-0ubuntu1) ... 158s Selecting previously unselected package libitm1:amd64. 158s Preparing to unpack .../008-libitm1_15-20250222-0ubuntu1_amd64.deb ... 158s Unpacking libitm1:amd64 (15-20250222-0ubuntu1) ... 158s Selecting previously unselected package libasan8:amd64. 158s Preparing to unpack .../009-libasan8_15-20250222-0ubuntu1_amd64.deb ... 158s Unpacking libasan8:amd64 (15-20250222-0ubuntu1) ... 158s Selecting previously unselected package liblsan0:amd64. 158s Preparing to unpack .../010-liblsan0_15-20250222-0ubuntu1_amd64.deb ... 158s Unpacking liblsan0:amd64 (15-20250222-0ubuntu1) ... 158s Selecting previously unselected package libtsan2:amd64. 158s Preparing to unpack .../011-libtsan2_15-20250222-0ubuntu1_amd64.deb ... 158s Unpacking libtsan2:amd64 (15-20250222-0ubuntu1) ... 158s Selecting previously unselected package libubsan1:amd64. 158s Preparing to unpack .../012-libubsan1_15-20250222-0ubuntu1_amd64.deb ... 158s Unpacking libubsan1:amd64 (15-20250222-0ubuntu1) ... 158s Selecting previously unselected package libhwasan0:amd64. 158s Preparing to unpack .../013-libhwasan0_15-20250222-0ubuntu1_amd64.deb ... 158s Unpacking libhwasan0:amd64 (15-20250222-0ubuntu1) ... 158s Selecting previously unselected package libquadmath0:amd64. 158s Preparing to unpack .../014-libquadmath0_15-20250222-0ubuntu1_amd64.deb ... 158s Unpacking libquadmath0:amd64 (15-20250222-0ubuntu1) ... 158s Selecting previously unselected package libgcc-14-dev:amd64. 158s Preparing to unpack .../015-libgcc-14-dev_14.2.0-17ubuntu3_amd64.deb ... 158s Unpacking libgcc-14-dev:amd64 (14.2.0-17ubuntu3) ... 158s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 158s Preparing to unpack .../016-gcc-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 158s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 159s Selecting previously unselected package gcc-14. 159s Preparing to unpack .../017-gcc-14_14.2.0-17ubuntu3_amd64.deb ... 159s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 159s Selecting previously unselected package gcc-x86-64-linux-gnu. 159s Preparing to unpack .../018-gcc-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 159s Unpacking gcc-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 159s Selecting previously unselected package gcc. 159s Preparing to unpack .../019-gcc_4%3a14.2.0-1ubuntu1_amd64.deb ... 159s Unpacking gcc (4:14.2.0-1ubuntu1) ... 159s Selecting previously unselected package libstdc++-14-dev:amd64. 159s Preparing to unpack .../020-libstdc++-14-dev_14.2.0-17ubuntu3_amd64.deb ... 159s Unpacking libstdc++-14-dev:amd64 (14.2.0-17ubuntu3) ... 159s Selecting previously unselected package g++-14-x86-64-linux-gnu. 159s Preparing to unpack .../021-g++-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 159s Unpacking g++-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 159s Selecting previously unselected package g++-14. 159s Preparing to unpack .../022-g++-14_14.2.0-17ubuntu3_amd64.deb ... 159s Unpacking g++-14 (14.2.0-17ubuntu3) ... 159s Selecting previously unselected package g++-x86-64-linux-gnu. 159s Preparing to unpack .../023-g++-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 159s Unpacking g++-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 159s Selecting previously unselected package g++. 159s Preparing to unpack .../024-g++_4%3a14.2.0-1ubuntu1_amd64.deb ... 159s Unpacking g++ (4:14.2.0-1ubuntu1) ... 159s Selecting previously unselected package build-essential. 159s Preparing to unpack .../025-build-essential_12.10ubuntu1_amd64.deb ... 159s Unpacking build-essential (12.10ubuntu1) ... 159s Selecting previously unselected package dctrl-tools. 159s Preparing to unpack .../026-dctrl-tools_2.24-3build3_amd64.deb ... 159s Unpacking dctrl-tools (2.24-3build3) ... 159s Selecting previously unselected package fonts-dejavu-mono. 159s Preparing to unpack .../027-fonts-dejavu-mono_2.37-8_all.deb ... 159s Unpacking fonts-dejavu-mono (2.37-8) ... 159s Selecting previously unselected package fonts-dejavu-core. 159s Preparing to unpack .../028-fonts-dejavu-core_2.37-8_all.deb ... 159s Unpacking fonts-dejavu-core (2.37-8) ... 159s Selecting previously unselected package fontconfig-config. 159s Preparing to unpack .../029-fontconfig-config_2.15.0-2ubuntu1_amd64.deb ... 160s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 160s Selecting previously unselected package libfontconfig1:amd64. 160s Preparing to unpack .../030-libfontconfig1_2.15.0-2ubuntu1_amd64.deb ... 160s Unpacking libfontconfig1:amd64 (2.15.0-2ubuntu1) ... 160s Selecting previously unselected package fontconfig. 160s Preparing to unpack .../031-fontconfig_2.15.0-2ubuntu1_amd64.deb ... 160s Unpacking fontconfig (2.15.0-2ubuntu1) ... 160s Selecting previously unselected package fonts-font-awesome. 160s Preparing to unpack .../032-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 160s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 160s Selecting previously unselected package fonts-glyphicons-halflings. 160s Preparing to unpack .../033-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 160s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 160s Selecting previously unselected package fonts-lmodern. 160s Preparing to unpack .../034-fonts-lmodern_2.005-1_all.deb ... 160s Unpacking fonts-lmodern (2.005-1) ... 160s Selecting previously unselected package fonts-mathjax. 160s Preparing to unpack .../035-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 160s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 160s Selecting previously unselected package libgfortran5:amd64. 160s Preparing to unpack .../036-libgfortran5_15-20250222-0ubuntu1_amd64.deb ... 160s Unpacking libgfortran5:amd64 (15-20250222-0ubuntu1) ... 160s Selecting previously unselected package libgfortran-14-dev:amd64. 160s Preparing to unpack .../037-libgfortran-14-dev_14.2.0-17ubuntu3_amd64.deb ... 160s Unpacking libgfortran-14-dev:amd64 (14.2.0-17ubuntu3) ... 160s Selecting previously unselected package gfortran-14-x86-64-linux-gnu. 160s Preparing to unpack .../038-gfortran-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 160s Unpacking gfortran-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 160s Selecting previously unselected package gfortran-14. 160s Preparing to unpack .../039-gfortran-14_14.2.0-17ubuntu3_amd64.deb ... 160s Unpacking gfortran-14 (14.2.0-17ubuntu3) ... 160s Selecting previously unselected package gfortran-x86-64-linux-gnu. 160s Preparing to unpack .../040-gfortran-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 160s Unpacking gfortran-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 160s Selecting previously unselected package gfortran. 160s Preparing to unpack .../041-gfortran_4%3a14.2.0-1ubuntu1_amd64.deb ... 160s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 160s Selecting previously unselected package icu-devtools. 160s Preparing to unpack .../042-icu-devtools_76.1-1ubuntu2_amd64.deb ... 160s Unpacking icu-devtools (76.1-1ubuntu2) ... 160s Selecting previously unselected package javascript-common. 160s Preparing to unpack .../043-javascript-common_12_all.deb ... 160s Unpacking javascript-common (12) ... 160s Selecting previously unselected package libio-string-perl. 160s Preparing to unpack .../044-libio-string-perl_1.08-4_all.deb ... 160s Unpacking libio-string-perl (1.08-4) ... 160s Selecting previously unselected package liblatex-tounicode-perl. 161s Preparing to unpack .../045-liblatex-tounicode-perl_0.55-1_all.deb ... 161s Unpacking liblatex-tounicode-perl (0.55-1) ... 161s Selecting previously unselected package libbibtex-parser-perl. 161s Preparing to unpack .../046-libbibtex-parser-perl_1.05+dfsg-1_all.deb ... 161s Unpacking libbibtex-parser-perl (1.05+dfsg-1) ... 161s Selecting previously unselected package libblas3:amd64. 161s Preparing to unpack .../047-libblas3_3.12.1-2_amd64.deb ... 161s Unpacking libblas3:amd64 (3.12.1-2) ... 161s Selecting previously unselected package libblas-dev:amd64. 161s Preparing to unpack .../048-libblas-dev_3.12.1-2_amd64.deb ... 161s Unpacking libblas-dev:amd64 (3.12.1-2) ... 161s Selecting previously unselected package libbz2-dev:amd64. 161s Preparing to unpack .../049-libbz2-dev_1.0.8-6_amd64.deb ... 161s Unpacking libbz2-dev:amd64 (1.0.8-6) ... 161s Selecting previously unselected package libpixman-1-0:amd64. 161s Preparing to unpack .../050-libpixman-1-0_0.44.0-3_amd64.deb ... 161s Unpacking libpixman-1-0:amd64 (0.44.0-3) ... 161s Selecting previously unselected package libxcb-render0:amd64. 161s Preparing to unpack .../051-libxcb-render0_1.17.0-2_amd64.deb ... 161s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 161s Selecting previously unselected package libxcb-shm0:amd64. 161s Preparing to unpack .../052-libxcb-shm0_1.17.0-2_amd64.deb ... 161s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 161s Selecting previously unselected package libxrender1:amd64. 161s Preparing to unpack .../053-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 161s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 161s Selecting previously unselected package libcairo2:amd64. 161s Preparing to unpack .../054-libcairo2_1.18.2-2_amd64.deb ... 161s Unpacking libcairo2:amd64 (1.18.2-2) ... 161s Selecting previously unselected package libdatrie1:amd64. 161s Preparing to unpack .../055-libdatrie1_0.2.13-3build1_amd64.deb ... 161s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 161s Selecting previously unselected package libdeflate0:amd64. 161s Preparing to unpack .../056-libdeflate0_1.23-1_amd64.deb ... 161s Unpacking libdeflate0:amd64 (1.23-1) ... 161s Selecting previously unselected package libdeflate-dev:amd64. 161s Preparing to unpack .../057-libdeflate-dev_1.23-1_amd64.deb ... 161s Unpacking libdeflate-dev:amd64 (1.23-1) ... 161s Selecting previously unselected package libgraphite2-3:amd64. 161s Preparing to unpack .../058-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 161s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 161s Selecting previously unselected package libharfbuzz0b:amd64. 161s Preparing to unpack .../059-libharfbuzz0b_10.2.0-1_amd64.deb ... 161s Unpacking libharfbuzz0b:amd64 (10.2.0-1) ... 161s Selecting previously unselected package x11-common. 161s Preparing to unpack .../060-x11-common_1%3a7.7+23ubuntu3_all.deb ... 161s Unpacking x11-common (1:7.7+23ubuntu3) ... 161s Selecting previously unselected package libice6:amd64. 161s Preparing to unpack .../061-libice6_2%3a1.1.1-1_amd64.deb ... 161s Unpacking libice6:amd64 (2:1.1.1-1) ... 161s Selecting previously unselected package libicu-dev:amd64. 161s Preparing to unpack .../062-libicu-dev_76.1-1ubuntu2_amd64.deb ... 161s Unpacking libicu-dev:amd64 (76.1-1ubuntu2) ... 161s Selecting previously unselected package libjpeg-turbo8:amd64. 161s Preparing to unpack .../063-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ... 161s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 161s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 161s Preparing to unpack .../064-libjpeg-turbo8-dev_2.1.5-3ubuntu2_amd64.deb ... 161s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-3ubuntu2) ... 161s Selecting previously unselected package libjpeg8:amd64. 161s Preparing to unpack .../065-libjpeg8_8c-2ubuntu11_amd64.deb ... 161s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 162s Selecting previously unselected package libjpeg8-dev:amd64. 162s Preparing to unpack .../066-libjpeg8-dev_8c-2ubuntu11_amd64.deb ... 162s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu11) ... 162s Selecting previously unselected package libjpeg-dev:amd64. 162s Preparing to unpack .../067-libjpeg-dev_8c-2ubuntu11_amd64.deb ... 162s Unpacking libjpeg-dev:amd64 (8c-2ubuntu11) ... 162s Selecting previously unselected package libjs-bootstrap. 162s Preparing to unpack .../068-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 162s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 162s Selecting previously unselected package libjs-popper.js. 162s Preparing to unpack .../069-libjs-popper.js_1.16.1+ds-6_all.deb ... 162s Unpacking libjs-popper.js (1.16.1+ds-6) ... 162s Selecting previously unselected package libjs-bootstrap4. 162s Preparing to unpack .../070-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 162s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 162s Selecting previously unselected package libjs-d3. 162s Preparing to unpack .../071-libjs-d3_3.5.17-4_all.deb ... 162s Unpacking libjs-d3 (3.5.17-4) ... 162s Selecting previously unselected package libjs-es5-shim. 162s Preparing to unpack .../072-libjs-es5-shim_4.6.7-2_all.deb ... 162s Unpacking libjs-es5-shim (4.6.7-2) ... 162s Selecting previously unselected package libjs-highlight.js. 162s Preparing to unpack .../073-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 162s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 162s Selecting previously unselected package libjs-jquery. 162s Preparing to unpack .../074-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 162s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 162s Selecting previously unselected package libjs-jquery-datatables. 162s Preparing to unpack .../075-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 162s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 162s Selecting previously unselected package libjs-sifter.js. 162s Preparing to unpack .../076-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 162s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 162s Selecting previously unselected package libjs-microplugin.js. 162s Preparing to unpack .../077-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 162s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 162s Selecting previously unselected package libjs-jquery-selectize.js. 162s Preparing to unpack .../078-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 162s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 162s Selecting previously unselected package libjs-jquery-ui. 162s Preparing to unpack .../079-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 162s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 162s Selecting previously unselected package libjs-json. 162s Preparing to unpack .../080-libjs-json_0~20221030+~1.0.8-1_all.deb ... 162s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 162s Selecting previously unselected package libjs-lunr. 162s Preparing to unpack .../081-libjs-lunr_2.3.9~dfsg-2_all.deb ... 162s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 162s Selecting previously unselected package libjs-prettify. 162s Preparing to unpack .../082-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 162s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 162s Selecting previously unselected package libkpathsea6:amd64. 162s Preparing to unpack .../083-libkpathsea6_2024.20240313.70630+ds-6_amd64.deb ... 162s Unpacking libkpathsea6:amd64 (2024.20240313.70630+ds-6) ... 162s Selecting previously unselected package liblapack3:amd64. 162s Preparing to unpack .../084-liblapack3_3.12.1-2_amd64.deb ... 162s Unpacking liblapack3:amd64 (3.12.1-2) ... 162s Selecting previously unselected package liblapack-dev:amd64. 162s Preparing to unpack .../085-liblapack-dev_3.12.1-2_amd64.deb ... 162s Unpacking liblapack-dev:amd64 (3.12.1-2) ... 163s Selecting previously unselected package liblerc4:amd64. 163s Preparing to unpack .../086-liblerc4_4.0.0+ds-5ubuntu1_amd64.deb ... 163s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 163s Selecting previously unselected package liblua5.4-0:amd64. 163s Preparing to unpack .../087-liblua5.4-0_5.4.7-1_amd64.deb ... 163s Unpacking liblua5.4-0:amd64 (5.4.7-1) ... 163s Selecting previously unselected package libmpfi0:amd64. 163s Preparing to unpack .../088-libmpfi0_1.5.4+ds-4_amd64.deb ... 163s Unpacking libmpfi0:amd64 (1.5.4+ds-4) ... 163s Selecting previously unselected package libncurses-dev:amd64. 163s Preparing to unpack .../089-libncurses-dev_6.5+20250216-2_amd64.deb ... 163s Unpacking libncurses-dev:amd64 (6.5+20250216-2) ... 163s Selecting previously unselected package libthai-data. 163s Preparing to unpack .../090-libthai-data_0.1.29-2build1_all.deb ... 163s Unpacking libthai-data (0.1.29-2build1) ... 163s Selecting previously unselected package libthai0:amd64. 163s Preparing to unpack .../091-libthai0_0.1.29-2build1_amd64.deb ... 163s Unpacking libthai0:amd64 (0.1.29-2build1) ... 163s Selecting previously unselected package libpango-1.0-0:amd64. 163s Preparing to unpack .../092-libpango-1.0-0_1.56.2-1_amd64.deb ... 163s Unpacking libpango-1.0-0:amd64 (1.56.2-1) ... 163s Selecting previously unselected package libpangoft2-1.0-0:amd64. 163s Preparing to unpack .../093-libpangoft2-1.0-0_1.56.2-1_amd64.deb ... 163s Unpacking libpangoft2-1.0-0:amd64 (1.56.2-1) ... 163s Selecting previously unselected package libpangocairo-1.0-0:amd64. 163s Preparing to unpack .../094-libpangocairo-1.0-0_1.56.2-1_amd64.deb ... 163s Unpacking libpangocairo-1.0-0:amd64 (1.56.2-1) ... 163s Selecting previously unselected package libpaper2:amd64. 163s Preparing to unpack .../095-libpaper2_2.2.5-0.3_amd64.deb ... 163s Unpacking libpaper2:amd64 (2.2.5-0.3) ... 163s Selecting previously unselected package libpaper-utils. 163s Preparing to unpack .../096-libpaper-utils_2.2.5-0.3_amd64.deb ... 163s Unpacking libpaper-utils (2.2.5-0.3) ... 163s Selecting previously unselected package libpcre2-16-0:amd64. 163s Preparing to unpack .../097-libpcre2-16-0_10.45-1_amd64.deb ... 163s Unpacking libpcre2-16-0:amd64 (10.45-1) ... 163s Selecting previously unselected package libpcre2-32-0:amd64. 163s Preparing to unpack .../098-libpcre2-32-0_10.45-1_amd64.deb ... 163s Unpacking libpcre2-32-0:amd64 (10.45-1) ... 163s Selecting previously unselected package libpcre2-posix3:amd64. 163s Preparing to unpack .../099-libpcre2-posix3_10.45-1_amd64.deb ... 163s Unpacking libpcre2-posix3:amd64 (10.45-1) ... 163s Selecting previously unselected package libpcre2-dev:amd64. 163s Preparing to unpack .../100-libpcre2-dev_10.45-1_amd64.deb ... 163s Unpacking libpcre2-dev:amd64 (10.45-1) ... 163s Selecting previously unselected package libpkgconf3:amd64. 163s Preparing to unpack .../101-libpkgconf3_1.8.1-4_amd64.deb ... 163s Unpacking libpkgconf3:amd64 (1.8.1-4) ... 163s Selecting previously unselected package zlib1g-dev:amd64. 163s Preparing to unpack .../102-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ... 163s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 163s Selecting previously unselected package libpng-dev:amd64. 163s Preparing to unpack .../103-libpng-dev_1.6.47-1_amd64.deb ... 163s Unpacking libpng-dev:amd64 (1.6.47-1) ... 163s Selecting previously unselected package libpotrace0:amd64. 163s Preparing to unpack .../104-libpotrace0_1.16-2build1_amd64.deb ... 163s Unpacking libpotrace0:amd64 (1.16-2build1) ... 163s Selecting previously unselected package libptexenc1:amd64. 163s Preparing to unpack .../105-libptexenc1_2024.20240313.70630+ds-6_amd64.deb ... 163s Unpacking libptexenc1:amd64 (2024.20240313.70630+ds-6) ... 163s Selecting previously unselected package libreadline-dev:amd64. 163s Preparing to unpack .../106-libreadline-dev_8.2-6_amd64.deb ... 163s Unpacking libreadline-dev:amd64 (8.2-6) ... 163s Selecting previously unselected package libsharpyuv0:amd64. 163s Preparing to unpack .../107-libsharpyuv0_1.5.0-0.1_amd64.deb ... 163s Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ... 163s Selecting previously unselected package libsm6:amd64. 163s Preparing to unpack .../108-libsm6_2%3a1.2.4-1_amd64.deb ... 163s Unpacking libsm6:amd64 (2:1.2.4-1) ... 163s Selecting previously unselected package libsynctex2:amd64. 163s Preparing to unpack .../109-libsynctex2_2024.20240313.70630+ds-6_amd64.deb ... 163s Unpacking libsynctex2:amd64 (2024.20240313.70630+ds-6) ... 163s Selecting previously unselected package libtcl8.6:amd64. 163s Preparing to unpack .../110-libtcl8.6_8.6.16+dfsg-1_amd64.deb ... 163s Unpacking libtcl8.6:amd64 (8.6.16+dfsg-1) ... 163s Selecting previously unselected package libteckit0:amd64. 163s Preparing to unpack .../111-libteckit0_2.5.12+ds1-1_amd64.deb ... 163s Unpacking libteckit0:amd64 (2.5.12+ds1-1) ... 164s Selecting previously unselected package libtexlua53-5:amd64. 164s Preparing to unpack .../112-libtexlua53-5_2024.20240313.70630+ds-6_amd64.deb ... 164s Unpacking libtexlua53-5:amd64 (2024.20240313.70630+ds-6) ... 164s Selecting previously unselected package libjbig0:amd64. 164s Preparing to unpack .../113-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 164s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 164s Selecting previously unselected package libwebp7:amd64. 164s Preparing to unpack .../114-libwebp7_1.5.0-0.1_amd64.deb ... 164s Unpacking libwebp7:amd64 (1.5.0-0.1) ... 164s Selecting previously unselected package libtiff6:amd64. 164s Preparing to unpack .../115-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ... 164s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 164s Selecting previously unselected package libxft2:amd64. 164s Preparing to unpack .../116-libxft2_2.3.6-1build1_amd64.deb ... 164s Unpacking libxft2:amd64 (2.3.6-1build1) ... 164s Selecting previously unselected package libxss1:amd64. 164s Preparing to unpack .../117-libxss1_1%3a1.2.3-1build3_amd64.deb ... 164s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 164s Selecting previously unselected package libtk8.6:amd64. 164s Preparing to unpack .../118-libtk8.6_8.6.16-1_amd64.deb ... 164s Unpacking libtk8.6:amd64 (8.6.16-1) ... 164s Selecting previously unselected package libxt6t64:amd64. 164s Preparing to unpack .../119-libxt6t64_1%3a1.2.1-1.2build1_amd64.deb ... 164s Unpacking libxt6t64:amd64 (1:1.2.1-1.2build1) ... 164s Selecting previously unselected package libxmu6:amd64. 164s Preparing to unpack .../120-libxmu6_2%3a1.1.3-3build2_amd64.deb ... 164s Unpacking libxmu6:amd64 (2:1.1.3-3build2) ... 164s Selecting previously unselected package libxpm4:amd64. 164s Preparing to unpack .../121-libxpm4_1%3a3.5.17-1build2_amd64.deb ... 164s Unpacking libxpm4:amd64 (1:3.5.17-1build2) ... 164s Selecting previously unselected package libxaw7:amd64. 164s Preparing to unpack .../122-libxaw7_2%3a1.0.16-1_amd64.deb ... 164s Unpacking libxaw7:amd64 (2:1.0.16-1) ... 164s Selecting previously unselected package libxi6:amd64. 164s Preparing to unpack .../123-libxi6_2%3a1.8.2-1_amd64.deb ... 164s Unpacking libxi6:amd64 (2:1.8.2-1) ... 164s Selecting previously unselected package libzzip-0-13t64:amd64. 164s Preparing to unpack .../124-libzzip-0-13t64_0.13.78+dfsg.1-0.1_amd64.deb ... 164s Unpacking libzzip-0-13t64:amd64 (0.13.78+dfsg.1-0.1) ... 164s Selecting previously unselected package zip. 164s Preparing to unpack .../125-zip_3.0-14ubuntu2_amd64.deb ... 164s Unpacking zip (3.0-14ubuntu2) ... 164s Selecting previously unselected package unzip. 164s Preparing to unpack .../126-unzip_6.0-28ubuntu6_amd64.deb ... 164s Unpacking unzip (6.0-28ubuntu6) ... 164s Selecting previously unselected package xdg-utils. 164s Preparing to unpack .../127-xdg-utils_1.2.1-2ubuntu1_all.deb ... 164s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 164s Selecting previously unselected package r-base-core. 164s Preparing to unpack .../128-r-base-core_4.4.3-1_amd64.deb ... 164s Unpacking r-base-core (4.4.3-1) ... 164s Selecting previously unselected package r-cran-littler. 164s Preparing to unpack .../129-r-cran-littler_0.3.20-2_amd64.deb ... 164s Unpacking r-cran-littler (0.3.20-2) ... 165s Selecting previously unselected package littler. 165s Preparing to unpack .../130-littler_0.3.20-2_all.deb ... 165s Unpacking littler (0.3.20-2) ... 165s Selecting previously unselected package node-bootstrap-sass. 165s Preparing to unpack .../131-node-bootstrap-sass_3.4.3-2_all.deb ... 165s Unpacking node-bootstrap-sass (3.4.3-2) ... 165s Selecting previously unselected package node-html5shiv. 165s Preparing to unpack .../132-node-html5shiv_3.7.3+dfsg-5_all.deb ... 165s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 165s Selecting previously unselected package node-normalize.css. 165s Preparing to unpack .../133-node-normalize.css_8.0.1-5_all.deb ... 165s Unpacking node-normalize.css (8.0.1-5) ... 165s Selecting previously unselected package pandoc-data. 165s Preparing to unpack .../134-pandoc-data_3.1.11.1-3build1_all.deb ... 165s Unpacking pandoc-data (3.1.11.1-3build1) ... 165s Selecting previously unselected package pandoc. 165s Preparing to unpack .../135-pandoc_3.1.11.1+ds-2_amd64.deb ... 165s Unpacking pandoc (3.1.11.1+ds-2) ... 166s Selecting previously unselected package liblzma-dev:amd64. 166s Preparing to unpack .../136-liblzma-dev_5.6.4-1_amd64.deb ... 166s Unpacking liblzma-dev:amd64 (5.6.4-1) ... 166s Selecting previously unselected package pkgconf-bin. 166s Preparing to unpack .../137-pkgconf-bin_1.8.1-4_amd64.deb ... 166s Unpacking pkgconf-bin (1.8.1-4) ... 166s Selecting previously unselected package pkgconf:amd64. 166s Preparing to unpack .../138-pkgconf_1.8.1-4_amd64.deb ... 166s Unpacking pkgconf:amd64 (1.8.1-4) ... 166s Selecting previously unselected package libtirpc-dev:amd64. 166s Preparing to unpack .../139-libtirpc-dev_1.3.4+ds-1.3_amd64.deb ... 166s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1.3) ... 166s Selecting previously unselected package r-base-dev. 166s Preparing to unpack .../140-r-base-dev_4.4.3-1_all.deb ... 166s Unpacking r-base-dev (4.4.3-1) ... 166s Selecting previously unselected package pkg-r-autopkgtest. 166s Preparing to unpack .../141-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 166s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 166s Selecting previously unselected package r-bioc-biocgenerics. 166s Preparing to unpack .../142-r-bioc-biocgenerics_0.52.0-2_all.deb ... 166s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 166s Selecting previously unselected package r-cran-base64enc. 166s Preparing to unpack .../143-r-cran-base64enc_0.1-3-3_amd64.deb ... 166s Unpacking r-cran-base64enc (0.1-3-3) ... 166s Selecting previously unselected package r-cran-digest. 166s Preparing to unpack .../144-r-cran-digest_0.6.37-1_amd64.deb ... 166s Unpacking r-cran-digest (0.6.37-1) ... 166s Selecting previously unselected package r-cran-fastmap. 166s Preparing to unpack .../145-r-cran-fastmap_1.2.0-1_amd64.deb ... 166s Unpacking r-cran-fastmap (1.2.0-1) ... 166s Selecting previously unselected package r-cran-rlang. 166s Preparing to unpack .../146-r-cran-rlang_1.1.5-1_amd64.deb ... 166s Unpacking r-cran-rlang (1.1.5-1) ... 166s Selecting previously unselected package r-cran-htmltools. 166s Preparing to unpack .../147-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 166s Unpacking r-cran-htmltools (0.5.8.1-1) ... 166s Selecting previously unselected package r-cran-evaluate. 166s Preparing to unpack .../148-r-cran-evaluate_1.0.3-1_all.deb ... 166s Unpacking r-cran-evaluate (1.0.3-1) ... 166s Selecting previously unselected package r-cran-xfun. 166s Preparing to unpack .../149-r-cran-xfun_0.51+dfsg-1_amd64.deb ... 166s Unpacking r-cran-xfun (0.51+dfsg-1) ... 166s Selecting previously unselected package r-cran-highr. 166s Preparing to unpack .../150-r-cran-highr_0.11+dfsg-1_all.deb ... 166s Unpacking r-cran-highr (0.11+dfsg-1) ... 166s Selecting previously unselected package r-cran-yaml. 166s Preparing to unpack .../151-r-cran-yaml_2.3.10-1_amd64.deb ... 166s Unpacking r-cran-yaml (2.3.10-1) ... 166s Selecting previously unselected package libjs-mathjax. 166s Preparing to unpack .../152-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 166s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 167s Selecting previously unselected package r-cran-knitr. 167s Preparing to unpack .../153-r-cran-knitr_1.49+dfsg-1_all.deb ... 167s Unpacking r-cran-knitr (1.49+dfsg-1) ... 167s Selecting previously unselected package r-cran-cachem. 167s Preparing to unpack .../154-r-cran-cachem_1.1.0-1_amd64.deb ... 167s Unpacking r-cran-cachem (1.1.0-1) ... 167s Selecting previously unselected package r-cran-jquerylib. 167s Preparing to unpack .../155-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 167s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 167s Selecting previously unselected package r-cran-jsonlite. 167s Preparing to unpack .../156-r-cran-jsonlite_1.9.1+dfsg-1_amd64.deb ... 167s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 167s Selecting previously unselected package r-cran-cli. 167s Preparing to unpack .../157-r-cran-cli_3.6.4-1_amd64.deb ... 167s Unpacking r-cran-cli (3.6.4-1) ... 167s Selecting previously unselected package r-cran-glue. 167s Preparing to unpack .../158-r-cran-glue_1.8.0-1_amd64.deb ... 167s Unpacking r-cran-glue (1.8.0-1) ... 167s Selecting previously unselected package r-cran-lifecycle. 167s Preparing to unpack .../159-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 167s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 167s Selecting previously unselected package r-cran-memoise. 167s Preparing to unpack .../160-r-cran-memoise_2.0.1-1_all.deb ... 167s Unpacking r-cran-memoise (2.0.1-1) ... 167s Selecting previously unselected package r-cran-mime. 167s Preparing to unpack .../161-r-cran-mime_0.12-2_amd64.deb ... 167s Unpacking r-cran-mime (0.12-2) ... 167s Selecting previously unselected package r-cran-fs. 167s Preparing to unpack .../162-r-cran-fs_1.6.5+dfsg-1_amd64.deb ... 167s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 167s Selecting previously unselected package r-cran-r6. 167s Preparing to unpack .../163-r-cran-r6_2.6.1-1_all.deb ... 167s Unpacking r-cran-r6 (2.6.1-1) ... 167s Selecting previously unselected package r-cran-rappdirs. 167s Preparing to unpack .../164-r-cran-rappdirs_0.3.3-1_amd64.deb ... 167s Unpacking r-cran-rappdirs (0.3.3-1) ... 167s Selecting previously unselected package r-cran-sass. 167s Preparing to unpack .../165-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 167s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 167s Selecting previously unselected package r-cran-bslib. 167s Preparing to unpack .../166-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 167s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 168s Selecting previously unselected package r-cran-fontawesome. 168s Preparing to unpack .../167-r-cran-fontawesome_0.5.3-1_all.deb ... 168s Unpacking r-cran-fontawesome (0.5.3-1) ... 168s Selecting previously unselected package r-cran-tinytex. 168s Preparing to unpack .../168-r-cran-tinytex_0.56-1_all.deb ... 168s Unpacking r-cran-tinytex (0.56-1) ... 168s Selecting previously unselected package libjs-modernizr. 168s Preparing to unpack .../169-libjs-modernizr_3.13.0-0.1_all.deb ... 168s Unpacking libjs-modernizr (3.13.0-0.1) ... 168s Selecting previously unselected package r-cran-pkgkitten. 168s Preparing to unpack .../170-r-cran-pkgkitten_0.2.4-1_all.deb ... 168s Unpacking r-cran-pkgkitten (0.2.4-1) ... 168s Selecting previously unselected package r-cran-rcpp. 168s Preparing to unpack .../171-r-cran-rcpp_1.0.14-1_amd64.deb ... 168s Unpacking r-cran-rcpp (1.0.14-1) ... 168s Selecting previously unselected package r-cran-later. 168s Preparing to unpack .../172-r-cran-later_1.4.1+dfsg-1_amd64.deb ... 168s Unpacking r-cran-later (1.4.1+dfsg-1) ... 168s Selecting previously unselected package r-cran-magrittr. 168s Preparing to unpack .../173-r-cran-magrittr_2.0.3-1_amd64.deb ... 168s Unpacking r-cran-magrittr (2.0.3-1) ... 168s Selecting previously unselected package r-cran-promises. 168s Preparing to unpack .../174-r-cran-promises_1.3.2+dfsg-1_amd64.deb ... 168s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 168s Selecting previously unselected package r-cran-httpuv. 168s Preparing to unpack .../175-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 168s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 168s Selecting previously unselected package r-cran-xtable. 168s Preparing to unpack .../176-r-cran-xtable_1%3a1.8-4-2_all.deb ... 168s Unpacking r-cran-xtable (1:1.8-4-2) ... 168s Selecting previously unselected package r-cran-sourcetools. 168s Preparing to unpack .../177-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 168s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 168s Selecting previously unselected package r-cran-crayon. 168s Preparing to unpack .../178-r-cran-crayon_1.5.3-1_all.deb ... 168s Unpacking r-cran-crayon (1.5.3-1) ... 168s Selecting previously unselected package r-cran-withr. 168s Preparing to unpack .../179-r-cran-withr_3.0.2+dfsg-1_all.deb ... 168s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 168s Selecting previously unselected package r-cran-commonmark. 168s Preparing to unpack .../180-r-cran-commonmark_1.9.2-2_amd64.deb ... 168s Unpacking r-cran-commonmark (1.9.2-2) ... 168s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 168s Preparing to unpack .../181-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 168s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 168s Selecting previously unselected package r-cran-shiny. 168s Preparing to unpack .../182-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 168s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 169s Selecting previously unselected package r-cran-rmarkdown. 169s Preparing to unpack .../183-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 169s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 169s Selecting previously unselected package r-cran-bookdown. 169s Preparing to unpack .../184-r-cran-bookdown_0.42+dfsg-1_all.deb ... 169s Unpacking r-cran-bookdown (0.42+dfsg-1) ... 169s Selecting previously unselected package r-cran-biocmanager. 169s Preparing to unpack .../185-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 169s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 169s Selecting previously unselected package tex-common. 169s Preparing to unpack .../186-tex-common_6.19_all.deb ... 169s Unpacking tex-common (6.19) ... 169s Selecting previously unselected package t1utils. 169s Preparing to unpack .../187-t1utils_1.41-4build3_amd64.deb ... 169s Unpacking t1utils (1.41-4build3) ... 169s Selecting previously unselected package texlive-binaries. 169s Preparing to unpack .../188-texlive-binaries_2024.20240313.70630+ds-6_amd64.deb ... 169s Unpacking texlive-binaries (2024.20240313.70630+ds-6) ... 169s Selecting previously unselected package texlive-base. 169s Preparing to unpack .../189-texlive-base_2024.20250114-1_all.deb ... 169s Unpacking texlive-base (2024.20250114-1) ... 170s Selecting previously unselected package texlive-latex-base. 170s Preparing to unpack .../190-texlive-latex-base_2024.20250114-1_all.deb ... 170s Unpacking texlive-latex-base (2024.20250114-1) ... 170s Selecting previously unselected package texlive-bibtex-extra. 170s Preparing to unpack .../191-texlive-bibtex-extra_2024.20250114-1_all.deb ... 170s Unpacking texlive-bibtex-extra (2024.20250114-1) ... 172s Selecting previously unselected package r-bioc-biocversion. 172s Preparing to unpack .../192-r-bioc-biocversion_3.20.0-2_all.deb ... 172s Unpacking r-bioc-biocversion (3.20.0-2) ... 173s Selecting previously unselected package r-bioc-biocstyle. 173s Preparing to unpack .../193-r-bioc-biocstyle_2.34.0+dfsg-1_all.deb ... 173s Unpacking r-bioc-biocstyle (2.34.0+dfsg-1) ... 173s Selecting previously unselected package coinor-libcoinutils3v5:amd64. 173s Preparing to unpack .../194-coinor-libcoinutils3v5_2.11.11+ds-5_amd64.deb ... 173s Unpacking coinor-libcoinutils3v5:amd64 (2.11.11+ds-5) ... 173s Selecting previously unselected package coinor-libosi1v5:amd64. 173s Preparing to unpack .../195-coinor-libosi1v5_0.108.10+ds-2_amd64.deb ... 173s Unpacking coinor-libosi1v5:amd64 (0.108.10+ds-2) ... 173s Selecting previously unselected package coinor-libclp1:amd64. 173s Preparing to unpack .../196-coinor-libclp1_1.17.10+ds-1_amd64.deb ... 173s Unpacking coinor-libclp1:amd64 (1.17.10+ds-1) ... 173s Selecting previously unselected package coinor-libcgl1:amd64. 173s Preparing to unpack .../197-coinor-libcgl1_0.60.9+ds-1_amd64.deb ... 173s Unpacking coinor-libcgl1:amd64 (0.60.9+ds-1) ... 173s Selecting previously unselected package coinor-libsymphony3:amd64. 173s Preparing to unpack .../198-coinor-libsymphony3_5.6.17+dfsg-1_amd64.deb ... 173s Unpacking coinor-libsymphony3:amd64 (5.6.17+dfsg-1) ... 173s Selecting previously unselected package r-bioc-lpsymphony. 173s Preparing to unpack .../199-r-bioc-lpsymphony_1.34.0+dfsg-2_amd64.deb ... 173s Unpacking r-bioc-lpsymphony (1.34.0+dfsg-2) ... 173s Selecting previously unselected package r-cran-brio. 173s Preparing to unpack .../200-r-cran-brio_1.1.5-1_amd64.deb ... 173s Unpacking r-cran-brio (1.1.5-1) ... 173s Selecting previously unselected package r-cran-ps. 173s Preparing to unpack .../201-r-cran-ps_1.9.0-1_amd64.deb ... 173s Unpacking r-cran-ps (1.9.0-1) ... 173s Selecting previously unselected package r-cran-processx. 173s Preparing to unpack .../202-r-cran-processx_3.8.6-1_amd64.deb ... 173s Unpacking r-cran-processx (3.8.6-1) ... 173s Selecting previously unselected package r-cran-callr. 173s Preparing to unpack .../203-r-cran-callr_3.7.6-1_all.deb ... 173s Unpacking r-cran-callr (3.7.6-1) ... 173s Selecting previously unselected package r-cran-desc. 173s Preparing to unpack .../204-r-cran-desc_1.4.3-1_all.deb ... 173s Unpacking r-cran-desc (1.4.3-1) ... 173s Selecting previously unselected package r-cran-diffobj. 173s Preparing to unpack .../205-r-cran-diffobj_0.3.5-1_amd64.deb ... 173s Unpacking r-cran-diffobj (0.3.5-1) ... 173s Selecting previously unselected package r-cran-pkgbuild. 173s Preparing to unpack .../206-r-cran-pkgbuild_1.4.6-1_all.deb ... 173s Unpacking r-cran-pkgbuild (1.4.6-1) ... 173s Selecting previously unselected package r-cran-rprojroot. 173s Preparing to unpack .../207-r-cran-rprojroot_2.0.4-2_all.deb ... 173s Unpacking r-cran-rprojroot (2.0.4-2) ... 173s Selecting previously unselected package r-cran-pkgload. 173s Preparing to unpack .../208-r-cran-pkgload_1.4.0-1_all.deb ... 173s Unpacking r-cran-pkgload (1.4.0-1) ... 173s Selecting previously unselected package r-cran-praise. 173s Preparing to unpack .../209-r-cran-praise_1.0.0-4build1_all.deb ... 173s Unpacking r-cran-praise (1.0.0-4build1) ... 173s Selecting previously unselected package r-cran-waldo. 173s Preparing to unpack .../210-r-cran-waldo_0.6.1-2_all.deb ... 173s Unpacking r-cran-waldo (0.6.1-2) ... 173s Selecting previously unselected package r-cran-testthat. 174s Preparing to unpack .../211-r-cran-testthat_3.2.3-1_amd64.deb ... 174s Unpacking r-cran-testthat (3.2.3-1) ... 174s Setting up libjs-json (0~20221030+~1.0.8-1) ... 174s Setting up javascript-common (12) ... 174s Setting up libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 174s Setting up libpixman-1-0:amd64 (0.44.0-3) ... 174s Setting up libsharpyuv0:amd64 (1.5.0-0.1) ... 174s Setting up libncurses-dev:amd64 (6.5+20250216-2) ... 174s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 174s Setting up liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 174s Setting up libxpm4:amd64 (1:3.5.17-1build2) ... 174s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 174s Setting up libxi6:amd64 (2:1.8.2-1) ... 174s Setting up libxrender1:amd64 (1:0.9.10-1.1build1) ... 174s Setting up libdatrie1:amd64 (0.2.13-3build1) ... 174s Setting up libjs-popper.js (1.16.1+ds-6) ... 174s Setting up libxcb-render0:amd64 (1.17.0-2) ... 174s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 174s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 174s Setting up libjs-lunr (2.3.9~dfsg-2) ... 174s Setting up unzip (6.0-28ubuntu6) ... 174s Setting up liblatex-tounicode-perl (0.55-1) ... 174s Setting up x11-common (1:7.7+23ubuntu3) ... 174s Setting up node-html5shiv (3.7.3+dfsg-5) ... 174s Setting up libdeflate0:amd64 (1.23-1) ... 174s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 174s Setting up libxcb-shm0:amd64 (1.17.0-2) ... 174s Setting up libreadline-dev:amd64 (8.2-6) ... 174s Setting up libgomp1:amd64 (15-20250222-0ubuntu1) ... 174s Setting up libjs-modernizr (3.13.0-0.1) ... 174s Setting up libjbig0:amd64 (2.1-6.1ubuntu2) ... 174s Setting up libpcre2-16-0:amd64 (10.45-1) ... 174s Setting up libjs-es5-shim (4.6.7-2) ... 174s Setting up tex-common (6.19) ... 174s update-language: texlive-base not installed and configured, doing nothing! 174s Setting up libio-string-perl (1.08-4) ... 174s Setting up zip (3.0-14ubuntu2) ... 174s Setting up libpcre2-32-0:amd64 (10.45-1) ... 174s Setting up libblas3:amd64 (3.12.1-2) ... 174s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 174s Setting up libtirpc-dev:amd64 (1.3.4+ds-1.3) ... 174s Setting up libpkgconf3:amd64 (1.8.1-4) ... 174s Setting up libzzip-0-13t64:amd64 (0.13.78+dfsg.1-0.1) ... 174s Setting up libteckit0:amd64 (2.5.12+ds1-1) ... 174s Setting up t1utils (1.41-4build3) ... 174s Setting up libquadmath0:amd64 (15-20250222-0ubuntu1) ... 174s Setting up libtexlua53-5:amd64 (2024.20240313.70630+ds-6) ... 174s Setting up libjs-d3 (3.5.17-4) ... 174s Setting up fonts-dejavu-mono (2.37-8) ... 174s Setting up libmpc3:amd64 (1.3.1-1build2) ... 174s Setting up libtcl8.6:amd64 (8.6.16+dfsg-1) ... 174s Setting up libmpfi0:amd64 (1.5.4+ds-4) ... 174s Setting up icu-devtools (76.1-1ubuntu2) ... 174s Setting up fonts-dejavu-core (2.37-8) ... 174s Setting up pkgconf-bin (1.8.1-4) ... 174s Setting up libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 174s Setting up libkpathsea6:amd64 (2024.20240313.70630+ds-6) ... 174s Setting up libgfortran5:amd64 (15-20250222-0ubuntu1) ... 174s Setting up libwebp7:amd64 (1.5.0-0.1) ... 174s Setting up liblzma-dev:amd64 (5.6.4-1) ... 174s Setting up libubsan1:amd64 (15-20250222-0ubuntu1) ... 174s Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 174s Setting up libpcre2-posix3:amd64 (10.45-1) ... 174s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... 174s Setting up libhwasan0:amd64 (15-20250222-0ubuntu1) ... 174s Setting up libasan8:amd64 (15-20250222-0ubuntu1) ... 174s Setting up fonts-lmodern (2.005-1) ... 174s Setting up liblua5.4-0:amd64 (5.4.7-1) ... 174s Setting up libharfbuzz0b:amd64 (10.2.0-1) ... 174s Setting up libthai-data (0.1.29-2build1) ... 174s Setting up node-bootstrap-sass (3.4.3-2) ... 174s Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... 174s Setting up libxss1:amd64 (1:1.2.3-1build3) ... 174s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... 174s Setting up libpaper2:amd64 (2.2.5-0.3) ... 174s Setting up pandoc-data (3.1.11.1-3build1) ... 174s Setting up libtsan2:amd64 (15-20250222-0ubuntu1) ... 174s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 174s Setting up libisl23:amd64 (0.27-1) ... 174s Setting up libdeflate-dev:amd64 (1.23-1) ... 174s Setting up node-normalize.css (8.0.1-5) ... 174s Setting up libicu-dev:amd64 (76.1-1ubuntu2) ... 174s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 174s Setting up xdg-utils (1.2.1-2ubuntu1) ... 174s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 174s Setting up libcc1-0:amd64 (15-20250222-0ubuntu1) ... 174s Setting up liblsan0:amd64 (15-20250222-0ubuntu1) ... 174s Setting up libblas-dev:amd64 (3.12.1-2) ... 174s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode 174s Setting up dctrl-tools (2.24-3build3) ... 174s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 174s Setting up libitm1:amd64 (15-20250222-0ubuntu1) ... 174s Setting up libsynctex2:amd64 (2024.20240313.70630+ds-6) ... 174s Setting up libbz2-dev:amd64 (1.0.8-6) ... 174s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 174s Setting up libpotrace0:amd64 (1.16-2build1) ... 174s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 174s Setting up libice6:amd64 (2:1.1.1-1) ... 174s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-3ubuntu2) ... 174s Setting up liblapack3:amd64 (3.12.1-2) ... 174s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 174s Setting up libpcre2-dev:amd64 (10.45-1) ... 174s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 175s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 175s Setting up libpng-dev:amd64 (1.6.47-1) ... 175s Setting up libpaper-utils (2.2.5-0.3) ... 175s Setting up libbibtex-parser-perl (1.05+dfsg-1) ... 175s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 175s Setting up pkgconf:amd64 (1.8.1-4) ... 175s Setting up coinor-libcoinutils3v5:amd64 (2.11.11+ds-5) ... 175s Setting up libthai0:amd64 (0.1.29-2build1) ... 175s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 175s Setting up libptexenc1:amd64 (2024.20240313.70630+ds-6) ... 175s Setting up pandoc (3.1.11.1+ds-2) ... 175s Setting up liblapack-dev:amd64 (3.12.1-2) ... 175s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode 175s Setting up cpp-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 175s Setting up coinor-libosi1v5:amd64 (0.108.10+ds-2) ... 175s Setting up cpp-14 (14.2.0-17ubuntu3) ... 175s Setting up libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 175s Setting up libfontconfig1:amd64 (2.15.0-2ubuntu1) ... 175s Setting up libgcc-14-dev:amd64 (14.2.0-17ubuntu3) ... 175s Setting up libjpeg8-dev:amd64 (8c-2ubuntu11) ... 175s Setting up libstdc++-14-dev:amd64 (14.2.0-17ubuntu3) ... 175s Setting up libsm6:amd64 (2:1.2.4-1) ... 175s Setting up cpp-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 175s Setting up libgfortran-14-dev:amd64 (14.2.0-17ubuntu3) ... 175s Setting up fontconfig (2.15.0-2ubuntu1) ... 177s Regenerating fonts cache... done. 177s Setting up libxft2:amd64 (2.3.6-1build1) ... 177s Setting up libtk8.6:amd64 (8.6.16-1) ... 177s Setting up libpango-1.0-0:amd64 (1.56.2-1) ... 177s Setting up libjpeg-dev:amd64 (8c-2ubuntu11) ... 177s Setting up libcairo2:amd64 (1.18.2-2) ... 177s Setting up coinor-libclp1:amd64 (1.17.10+ds-1) ... 177s Setting up libxt6t64:amd64 (1:1.2.1-1.2build1) ... 177s Setting up cpp (4:14.2.0-1ubuntu1) ... 177s Setting up coinor-libcgl1:amd64 (0.60.9+ds-1) ... 177s Setting up gcc-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 177s Setting up libpangoft2-1.0-0:amd64 (1.56.2-1) ... 177s Setting up libpangocairo-1.0-0:amd64 (1.56.2-1) ... 177s Setting up libxmu6:amd64 (2:1.1.3-3build2) ... 177s Setting up gcc-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 177s Setting up libxaw7:amd64 (2:1.0.16-1) ... 177s Setting up gcc-14 (14.2.0-17ubuntu3) ... 177s Setting up gfortran-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 177s Setting up coinor-libsymphony3:amd64 (5.6.17+dfsg-1) ... 177s Setting up r-base-core (4.4.3-1) ... 177s Creating config file /etc/R/Renviron with new version 177s Setting up r-cran-crayon (1.5.3-1) ... 177s Setting up r-cran-sourcetools (0.1.7-1-1) ... 177s Setting up r-cran-ps (1.9.0-1) ... 177s Setting up g++-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 177s Setting up texlive-binaries (2024.20240313.70630+ds-6) ... 177s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode 177s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode 177s Setting up g++-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 177s Setting up r-cran-commonmark (1.9.2-2) ... 177s Setting up g++-14 (14.2.0-17ubuntu3) ... 177s Setting up r-cran-r6 (2.6.1-1) ... 177s Setting up r-cran-pkgkitten (0.2.4-1) ... 177s Setting up gfortran-14 (14.2.0-17ubuntu3) ... 177s Setting up texlive-base (2024.20250114-1) ... 178s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 178s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 178s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 178s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 179s Setting up r-cran-magrittr (2.0.3-1) ... 179s Setting up r-cran-rappdirs (0.3.3-1) ... 179s Setting up r-cran-littler (0.3.20-2) ... 179s Setting up r-cran-fs (1.6.5+dfsg-1) ... 179s Setting up r-cran-rcpp (1.0.14-1) ... 179s Setting up r-cran-brio (1.1.5-1) ... 179s Setting up r-cran-diffobj (0.3.5-1) ... 179s Setting up r-bioc-biocgenerics (0.52.0-2) ... 179s Setting up r-cran-rlang (1.1.5-1) ... 179s Setting up r-bioc-lpsymphony (1.34.0+dfsg-2) ... 179s Setting up littler (0.3.20-2) ... 179s Setting up r-cran-xfun (0.51+dfsg-1) ... 179s Setting up r-cran-withr (3.0.2+dfsg-1) ... 179s Setting up r-cran-processx (3.8.6-1) ... 179s Setting up r-cran-mime (0.12-2) ... 179s Setting up r-cran-praise (1.0.0-4build1) ... 179s Setting up r-cran-base64enc (0.1-3-3) ... 179s Setting up r-cran-digest (0.6.37-1) ... 179s Setting up r-cran-yaml (2.3.10-1) ... 179s Setting up r-cran-evaluate (1.0.3-1) ... 179s Setting up r-cran-highr (0.11+dfsg-1) ... 179s Setting up r-cran-glue (1.8.0-1) ... 179s Setting up gfortran-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 179s Setting up r-cran-xtable (1:1.8-4-2) ... 179s Setting up r-cran-cli (3.6.4-1) ... 179s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 179s Setting up r-bioc-biocversion (3.20.0-2) ... 179s Setting up r-cran-rprojroot (2.0.4-2) ... 179s Setting up r-cran-biocmanager (1.30.25+dfsg-1) ... 179s Setting up gcc (4:14.2.0-1ubuntu1) ... 179s Setting up r-cran-fastmap (1.2.0-1) ... 179s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ... 179s Setting up texlive-latex-base (2024.20250114-1) ... 179s Setting up r-cran-waldo (0.6.1-2) ... 179s Setting up r-cran-later (1.4.1+dfsg-1) ... 179s Setting up r-cran-htmltools (0.5.8.1-1) ... 179s Setting up r-cran-tinytex (0.56-1) ... 179s Setting up r-cran-knitr (1.49+dfsg-1) ... 179s Setting up g++ (4:14.2.0-1ubuntu1) ... 179s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 179s Setting up r-cran-cachem (1.1.0-1) ... 179s Setting up r-cran-sass (0.4.9+dfsg-1) ... 179s Setting up build-essential (12.10ubuntu1) ... 179s Setting up r-cran-callr (3.7.6-1) ... 179s Setting up r-cran-desc (1.4.3-1) ... 179s Setting up r-cran-fontawesome (0.5.3-1) ... 179s Setting up gfortran (4:14.2.0-1ubuntu1) ... 179s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 179s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 179s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 179s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 179s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 179s Setting up texlive-bibtex-extra (2024.20250114-1) ... 179s Setting up r-cran-memoise (2.0.1-1) ... 179s Setting up r-cran-promises (1.3.2+dfsg-1) ... 179s Setting up r-cran-pkgbuild (1.4.6-1) ... 179s Setting up r-cran-pkgload (1.4.0-1) ... 179s Setting up r-base-dev (4.4.3-1) ... 179s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 179s Setting up r-cran-testthat (3.2.3-1) ... 179s Setting up r-cran-bslib (0.8.0+dfsg-1) ... 179s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 179s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 179s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 179s Setting up r-cran-bookdown (0.42+dfsg-1) ... 179s Setting up r-bioc-biocstyle (2.34.0+dfsg-1) ... 179s Processing triggers for libc-bin (2.41-1ubuntu2) ... 179s Processing triggers for man-db (2.13.0-1) ... 181s Processing triggers for install-info (7.1.1-1) ... 181s Processing triggers for tex-common (6.19) ... 181s Running updmap-sys. This may take some time... done. 181s Running mktexlsr /var/lib/texmf ... done. 181s Building format(s) --all. 211s This may take some time... done. 211s autopkgtest [22:03:01]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 211s autopkgtest [22:03:01]: test pkg-r-autopkgtest: [----------------------- 211s Test: Try to load the R library lpsymphony 211s 211s R version 4.4.3 (2025-02-28) -- "Trophy Case" 211s Copyright (C) 2025 The R Foundation for Statistical Computing 211s Platform: x86_64-pc-linux-gnu 211s 211s R is free software and comes with ABSOLUTELY NO WARRANTY. 211s You are welcome to redistribute it under certain conditions. 211s Type 'license()' or 'licence()' for distribution details. 211s 211s R is a collaborative project with many contributors. 211s Type 'contributors()' for more information and 211s 'citation()' on how to cite R or R packages in publications. 211s 211s Type 'demo()' for some demos, 'help()' for on-line help, or 211s 'help.start()' for an HTML browser interface to help. 211s Type 'q()' to quit R. 211s 212s > library('lpsymphony') 212s > 212s > 212s Other tests are currently unsupported! 212s They will be progressively added. 212s autopkgtest [22:03:02]: test pkg-r-autopkgtest: -----------------------] 212s pkg-r-autopkgtest PASS 212s autopkgtest [22:03:02]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 212s autopkgtest [22:03:02]: @@@@@@@@@@@@@@@@@@@@ summary 212s pkg-r-autopkgtest PASS 229s nova [W] Skipping flock for amd64 229s Creating nova instance adt-plucky-amd64-r-bioc-lpsymphony-20250315-215929-juju-7f2275-prod-proposed-migration-environment-15-37b6bfa5-7fa1-42ba-a188-0a62634f6114 from image adt/ubuntu-plucky-amd64-server-20250306.img (UUID 60d877d7-b74c-4f24-920d-f4570db0a338)... 229s nova [W] Timed out waiting for cd6c222c-8fb3-4b3e-be8e-77bcb6d7648d to get deleted.