0s autopkgtest [21:58:09]: starting date and time: 2025-03-15 21:58:09+0000 0s autopkgtest [21:58:09]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [21:58:09]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.idrs_1u1/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-bioc-dirichletmultinomial --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-26.secgroup --name adt-plucky-amd64-r-bioc-dirichletmultinomial-20250315-215808-juju-7f2275-prod-proposed-migration-environment-2-9094f0ec-cfba-4608-962a-2555c56237b3 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 45s autopkgtest [21:58:54]: testbed dpkg architecture: amd64 45s autopkgtest [21:58:54]: testbed apt version: 2.9.31ubuntu1 46s autopkgtest [21:58:55]: @@@@@@@@@@@@@@@@@@@@ test bed setup 46s autopkgtest [21:58:55]: testbed release detected to be: None 47s autopkgtest [21:58:56]: updating testbed package index (apt update) 47s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 47s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 47s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 47s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 48s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [44.1 kB] 48s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [14.5 kB] 48s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [369 kB] 48s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [67.4 kB] 48s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [85.7 kB] 48s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 c-n-f Metadata [1852 B] 48s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 c-n-f Metadata [116 B] 48s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [174 kB] 48s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [342 kB] 48s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 c-n-f Metadata [15.3 kB] 48s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [8544 B] 48s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [16.1 kB] 48s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 c-n-f Metadata [628 B] 48s Fetched 1265 kB in 1s (1498 kB/s) 49s Reading package lists... 49s Reading package lists... 50s Building dependency tree... 50s Reading state information... 50s Calculating upgrade... 50s Calculating upgrade... 51s The following package was automatically installed and is no longer required: 51s libnl-genl-3-200 51s Use 'sudo apt autoremove' to remove it. 51s The following NEW packages will be installed: 51s bpftool libdebuginfod-common libdebuginfod1t64 linux-headers-6.14.0-10 51s linux-headers-6.14.0-10-generic linux-image-6.14.0-10-generic 51s linux-modules-6.14.0-10-generic linux-modules-extra-6.14.0-10-generic 51s linux-perf linux-tools-6.14.0-10 linux-tools-6.14.0-10-generic pnp.ids 51s The following packages will be upgraded: 51s apparmor apt apt-utils binutils binutils-common binutils-x86-64-linux-gnu 51s cloud-init cloud-init-base curl dosfstools exfatprogs fwupd gcc-15-base 51s gir1.2-girepository-2.0 gir1.2-glib-2.0 htop hwdata initramfs-tools 51s initramfs-tools-bin initramfs-tools-core libapparmor1 libapt-pkg7.0 51s libassuan9 libatomic1 libaudit-common libaudit1 libbinutils libbrotli1 51s libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libctf-nobfd0 libctf0 51s libcurl3t64-gnutls libcurl4t64 libestr0 libftdi1-2 libfwupd3 libgcc-s1 51s libgirepository-1.0-1 libglib2.0-0t64 libglib2.0-data libgpgme11t64 51s libgprofng0 libjemalloc2 liblz4-1 liblzma5 libmm-glib0 libncurses6 51s libncursesw6 libnewt0.52 libnl-3-200 libnl-genl-3-200 libnl-route-3-200 51s libnss-systemd libpam-systemd libparted2t64 libpci3 libpython3-stdlib 51s libpython3.13 libpython3.13-minimal libpython3.13-stdlib libseccomp2 51s libselinux1 libsemanage-common libsemanage2 libsframe1 libsqlite3-0 51s libstdc++6 libsystemd-shared libsystemd0 libtinfo6 libudev1 libxml2 51s linux-firmware linux-generic linux-headers-generic linux-headers-virtual 51s linux-image-generic linux-image-virtual linux-libc-dev linux-tools-common 51s linux-virtual locales media-types ncurses-base ncurses-bin ncurses-term 51s parted pci.ids pciutils pinentry-curses python-apt-common python3 51s python3-apt python3-bcrypt python3-cffi-backend python3-dbus python3-gi 51s python3-jinja2 python3-lazr.uri python3-markupsafe python3-minimal 51s python3-newt python3-rpds-py python3-systemd python3-yaml python3.13 51s python3.13-gdbm python3.13-minimal rsync rsyslog strace systemd 51s systemd-cryptsetup systemd-resolved systemd-sysv systemd-timesyncd 51s ubuntu-kernel-accessories ubuntu-minimal ubuntu-standard udev whiptail 51s xz-utils 51s 126 upgraded, 12 newly installed, 0 to remove and 0 not upgraded. 51s Need to get 829 MB of archives. 51s After this operation, 325 MB of additional disk space will be used. 51s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-bin amd64 6.5+20250216-2 [194 kB] 51s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-dev-bin amd64 2.41-1ubuntu1 [24.7 kB] 51s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6-dev amd64 2.41-1ubuntu1 [2182 kB] 51s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 locales all 2.41-1ubuntu1 [4246 kB] 52s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6 amd64 2.41-1ubuntu1 [3327 kB] 52s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-bin amd64 2.41-1ubuntu1 [701 kB] 52s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-libc-dev amd64 6.14.0-10.10 [1723 kB] 52s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libatomic1 amd64 15-20250222-0ubuntu1 [10.4 kB] 52s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-15-base amd64 15-20250222-0ubuntu1 [53.4 kB] 52s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-s1 amd64 15-20250222-0ubuntu1 [77.8 kB] 52s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++6 amd64 15-20250222-0ubuntu1 [798 kB] 52s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-base all 6.5+20250216-2 [25.9 kB] 52s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-term all 6.5+20250216-2 [276 kB] 52s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 liblz4-1 amd64 1.10.0-4 [66.4 kB] 52s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma5 amd64 5.6.4-1 [157 kB] 52s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd0 amd64 257.3-1ubuntu3 [595 kB] 52s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libnss-systemd amd64 257.3-1ubuntu3 [199 kB] 52s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-sysv amd64 257.3-1ubuntu3 [11.9 kB] 52s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-resolved amd64 257.3-1ubuntu3 [345 kB] 52s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-systemd amd64 257.3-1ubuntu3 [302 kB] 52s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd-shared amd64 257.3-1ubuntu3 [2371 kB] 52s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd amd64 257.3-1ubuntu3 [3052 kB] 52s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-timesyncd amd64 257.3-1ubuntu3 [42.1 kB] 52s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-cryptsetup amd64 257.3-1ubuntu3 [124 kB] 52s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 udev amd64 257.3-1ubuntu3 [1404 kB] 52s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libudev1 amd64 257.3-1ubuntu3 [215 kB] 52s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit-common all 1:4.0.2-2ubuntu2 [6628 B] 52s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libcap-ng0 amd64 0.8.5-4build1 [15.6 kB] 52s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit1 amd64 1:4.0.2-2ubuntu2 [54.0 kB] 52s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libseccomp2 amd64 2.5.5-1ubuntu6 [53.5 kB] 52s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libselinux1 amd64 3.7-3ubuntu3 [87.3 kB] 52s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libapparmor1 amd64 4.1.0~beta5-0ubuntu8 [55.0 kB] 52s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libapt-pkg7.0 amd64 2.9.33 [1138 kB] 52s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 apt amd64 2.9.33 [1439 kB] 52s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 apt-utils amd64 2.9.33 [222 kB] 52s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-minimal amd64 3.13.2-2 [27.7 kB] 52s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 python3 amd64 3.13.2-2 [24.0 kB] 52s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13 amd64 3.13.2-2 [2341 kB] 52s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 media-types all 13.0.0 [29.9 kB] 52s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses6 amd64 6.5+20250216-2 [126 kB] 52s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libncursesw6 amd64 6.5+20250216-2 [165 kB] 52s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libtinfo6 amd64 6.5+20250216-2 [119 kB] 52s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libsqlite3-0 amd64 3.46.1-2 [715 kB] 52s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.2-2 [735 kB] 52s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.2-2 [2365 kB] 53s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.2-2 [883 kB] 53s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.2-2 [2066 kB] 53s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.4 kB] 53s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 rsync amd64 3.4.1+ds1-3 [482 kB] 53s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod-common all 0.192-4 [15.4 kB] 53s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage-common all 3.7-2.1build1 [7268 B] 53s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage2 amd64 3.7-2.1build1 [106 kB] 53s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libassuan9 amd64 3.0.2-2 [43.1 kB] 53s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-girepository-2.0 amd64 1.83.4-1 [25.3 kB] 53s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-glib-2.0 amd64 2.84.0-1 [184 kB] 53s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-0t64 amd64 2.84.0-1 [1669 kB] 53s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libgirepository-1.0-1 amd64 1.83.4-1 [89.5 kB] 53s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libestr0 amd64 0.1.11-2 [8340 B] 53s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-data all 2.84.0-1 [53.0 kB] 53s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-newt amd64 0.52.24-4ubuntu2 [21.1 kB] 53s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libnewt0.52 amd64 0.52.24-4ubuntu2 [55.7 kB] 53s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2ubuntu5 [772 kB] 53s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 python-apt-common all 2.9.9build1 [21.3 kB] 53s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-apt amd64 2.9.9build1 [172 kB] 53s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-cffi-backend amd64 1.17.1-2build2 [96.6 kB] 53s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dbus amd64 1.3.2-5build5 [102 kB] 53s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-4build1 [252 kB] 53s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-yaml amd64 6.0.2-1build2 [144 kB] 53s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 rsyslog amd64 8.2412.0-2ubuntu2 [555 kB] 53s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 whiptail amd64 0.52.24-4ubuntu2 [19.1 kB] 53s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-minimal amd64 1.549 [11.5 kB] 53s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 apparmor amd64 4.1.0~beta5-0ubuntu8 [701 kB] 53s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 dosfstools amd64 4.2-1.2 [95.0 kB] 53s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-genl-3-200 amd64 3.7.0-1 [12.2 kB] 53s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-route-3-200 amd64 3.7.0-1 [191 kB] 53s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-3-200 amd64 3.7.0-1 [64.9 kB] 53s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 parted amd64 3.6-5 [53.9 kB] 53s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libparted2t64 amd64 3.6-5 [158 kB] 53s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 pci.ids all 0.0~2025.03.09-1 [285 kB] 53s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 pciutils amd64 1:3.13.0-2 [110 kB] 53s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 libpci3 amd64 1:3.13.0-2 [39.8 kB] 53s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 strace amd64 6.13+ds-1ubuntu1 [622 kB] 53s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 xz-utils amd64 5.6.4-1 [278 kB] 53s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-standard amd64 1.549 [11.5 kB] 53s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libgprofng0 amd64 2.44-3ubuntu1 [886 kB] 53s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf0 amd64 2.44-3ubuntu1 [96.5 kB] 53s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf-nobfd0 amd64 2.44-3ubuntu1 [98.9 kB] 53s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-x86-64-linux-gnu amd64 2.44-3ubuntu1 [1108 kB] 53s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libbinutils amd64 2.44-3ubuntu1 [585 kB] 53s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils amd64 2.44-3ubuntu1 [208 kB] 53s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-common amd64 2.44-3ubuntu1 [215 kB] 53s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libsframe1 amd64 2.44-3ubuntu1 [14.8 kB] 53s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 hwdata all 0.393-3 [1562 B] 53s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 pnp.ids all 0.393-3 [29.5 kB] 53s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-common all 6.14.0-10.10 [295 kB] 53s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 bpftool amd64 7.6.0+6.14.0-10.10 [1147 kB] 53s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-markupsafe amd64 2.1.5-1build4 [13.4 kB] 53s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 53s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init-base all 25.1-0ubuntu3 [616 kB] 53s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libbrotli1 amd64 1.1.0-2build4 [365 kB] 53s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 curl amd64 8.12.1-3ubuntu1 [258 kB] 53s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4t64 amd64 8.12.1-3ubuntu1 [437 kB] 54s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 exfatprogs amd64 1.2.8-1 [76.3 kB] 54s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl3t64-gnutls amd64 8.12.1-3ubuntu1 [432 kB] 54s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 fwupd amd64 2.0.6-4 [5408 kB] 54s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libfwupd3 amd64 2.0.6-4 [136 kB] 54s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libmm-glib0 amd64 1.23.4-0ubuntu3 [251 kB] 54s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 htop amd64 3.4.0-2 [195 kB] 54s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-firmware amd64 20250310.git9e1370d3-0ubuntu1 [571 MB] 70s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools all 0.146ubuntu1 [7920 B] 70s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-core all 0.146ubuntu1 [51.9 kB] 70s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-bin amd64 0.146ubuntu1 [26.2 kB] 70s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod1t64 amd64 0.192-4 [21.0 kB] 70s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 libftdi1-2 amd64 1.5-8build1 [30.2 kB] 70s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libgpgme11t64 amd64 1.24.2-1ubuntu2 [155 kB] 70s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libjemalloc2 amd64 5.3.0-3 [277 kB] 70s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-6.14.0-10-generic amd64 6.14.0-10.10 [41.2 MB] 71s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-6.14.0-10-generic amd64 6.14.0-10.10 [15.3 MB] 72s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-extra-6.14.0-10-generic amd64 6.14.0-10.10 [120 MB] 75s Get:120 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-generic amd64 6.14.0-10.10 [1730 B] 75s Get:121 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-generic amd64 6.14.0-10.10 [11.1 kB] 75s Get:122 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-virtual amd64 6.14.0-10.10 [1722 B] 75s Get:123 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-virtual amd64 6.14.0-10.10 [11.1 kB] 75s Get:124 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-virtual amd64 6.14.0-10.10 [1642 B] 75s Get:125 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10 all 6.14.0-10.10 [14.2 MB] 75s Get:126 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10-generic amd64 6.14.0-10.10 [3915 kB] 75s Get:127 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-generic amd64 6.14.0-10.10 [11.0 kB] 75s Get:128 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-perf amd64 6.14.0-10.10 [4122 kB] 75s Get:129 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10 amd64 6.14.0-10.10 [1394 kB] 75s Get:130 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10-generic amd64 6.14.0-10.10 [830 B] 75s Get:131 http://ftpmaster.internal/ubuntu plucky/main amd64 pinentry-curses amd64 1.3.1-2ubuntu3 [42.3 kB] 75s Get:132 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lazr.uri all 1.0.6-6 [13.7 kB] 75s Get:133 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-rpds-py amd64 0.21.0-2ubuntu2 [278 kB] 75s Get:134 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-systemd amd64 235-1build6 [43.9 kB] 75s Get:135 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-gdbm amd64 3.13.2-2 [31.9 kB] 75s Get:136 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-kernel-accessories amd64 1.549 [11.2 kB] 75s Get:137 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init all 25.1-0ubuntu3 [2100 B] 75s Get:138 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-bcrypt amd64 4.2.0-2.1build1 [221 kB] 76s Preconfiguring packages ... 76s Fetched 829 MB in 25s (33.6 MB/s) 76s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 83s Preparing to unpack .../0-libsqlite3-0_3.46.1-2_amd64.deb ... 83s Unpacking libsqlite3-0:amd64 (3.46.1-2) over (3.46.1-1) ... 83s Preparing to unpack .../1-python3.13_3.13.2-2_amd64.deb ... 83s Unpacking python3.13 (3.13.2-2) over (3.13.2-1) ... 83s Preparing to unpack .../2-python3.13-minimal_3.13.2-2_amd64.deb ... 83s Unpacking python3.13-minimal (3.13.2-2) over (3.13.2-1) ... 83s Preparing to unpack .../3-libpython3.13-minimal_3.13.2-2_amd64.deb ... 83s Unpacking libpython3.13-minimal:amd64 (3.13.2-2) over (3.13.2-1) ... 83s Preparing to unpack .../4-libpython3.13-stdlib_3.13.2-2_amd64.deb ... 83s Unpacking libpython3.13-stdlib:amd64 (3.13.2-2) over (3.13.2-1) ... 83s Preparing to unpack .../5-libpython3-stdlib_3.13.2-2_amd64.deb ... 83s Unpacking libpython3-stdlib:amd64 (3.13.2-2) over (3.13.2-1) ... 83s Preparing to unpack .../6-rsync_3.4.1+ds1-3_amd64.deb ... 83s Unpacking rsync (3.4.1+ds1-3) over (3.4.1-0syncable1) ... 83s Selecting previously unselected package libdebuginfod-common. 83s Preparing to unpack .../7-libdebuginfod-common_0.192-4_all.deb ... 83s Unpacking libdebuginfod-common (0.192-4) ... 83s Preparing to unpack .../8-libsemanage-common_3.7-2.1build1_all.deb ... 83s Unpacking libsemanage-common (3.7-2.1build1) over (3.7-2.1) ... 84s Setting up libsemanage-common (3.7-2.1build1) ... 84s (Reading database ... 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unpack .../29-xz-utils_5.6.4-1_amd64.deb ... 87s Unpacking xz-utils (5.6.4-1) over (5.6.3-1) ... 87s Preparing to unpack .../30-ubuntu-standard_1.549_amd64.deb ... 87s Unpacking ubuntu-standard (1.549) over (1.548) ... 87s Preparing to unpack .../31-libgprofng0_2.44-3ubuntu1_amd64.deb ... 87s Unpacking libgprofng0:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 87s Preparing to unpack .../32-libctf0_2.44-3ubuntu1_amd64.deb ... 87s Unpacking libctf0:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 87s Preparing to unpack .../33-libctf-nobfd0_2.44-3ubuntu1_amd64.deb ... 87s Unpacking libctf-nobfd0:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 87s Preparing to unpack .../34-binutils-x86-64-linux-gnu_2.44-3ubuntu1_amd64.deb ... 87s Unpacking binutils-x86-64-linux-gnu (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 87s Preparing to unpack .../35-libbinutils_2.44-3ubuntu1_amd64.deb ... 87s Unpacking libbinutils:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 87s Preparing to unpack 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unpack .../80-python3-systemd_235-1build6_amd64.deb ... 99s Unpacking python3-systemd (235-1build6) over (235-1build5) ... 99s Preparing to unpack .../81-python3.13-gdbm_3.13.2-2_amd64.deb ... 99s Unpacking python3.13-gdbm (3.13.2-2) over (3.13.2-1) ... 99s Preparing to unpack .../82-ubuntu-kernel-accessories_1.549_amd64.deb ... 99s Unpacking ubuntu-kernel-accessories (1.549) over (1.548) ... 99s Preparing to unpack .../83-cloud-init_25.1-0ubuntu3_all.deb ... 99s Unpacking cloud-init (25.1-0ubuntu3) over (25.1-0ubuntu2) ... 99s Preparing to unpack .../84-python3-bcrypt_4.2.0-2.1build1_amd64.deb ... 99s Unpacking python3-bcrypt (4.2.0-2.1build1) over (4.2.0-2.1) ... 99s Setting up linux-headers-6.14.0-10 (6.14.0-10.10) ... 99s Setting up media-types (13.0.0) ... 99s Installing new version of config file /etc/mime.types ... 99s Setting up linux-headers-6.14.0-10-generic (6.14.0-10.10) ... 99s Setting up ubuntu-kernel-accessories (1.549) ... 99s Setting up libapparmor1:amd64 (4.1.0~beta5-0ubuntu8) ... 99s Setting up pci.ids (0.0~2025.03.09-1) ... 99s Setting up libnewt0.52:amd64 (0.52.24-4ubuntu2) ... 99s Setting up apt-utils (2.9.33) ... 99s Setting up libdebuginfod-common (0.192-4) ... 99s Setting up exfatprogs (1.2.8-1) ... 99s Setting up linux-firmware (20250310.git9e1370d3-0ubuntu1) ... 99s Setting up bpftool (7.6.0+6.14.0-10.10) ... 99s Setting up libestr0:amd64 (0.1.11-2) ... 99s Setting up libbrotli1:amd64 (1.1.0-2build4) ... 99s Setting up libsqlite3-0:amd64 (3.46.1-2) ... 99s Setting up dosfstools (4.2-1.2) ... 99s Setting up rsyslog (8.2412.0-2ubuntu2) ... 100s info: The user `syslog' is already a member of `adm'. 101s Setting up binutils-common:amd64 (2.44-3ubuntu1) ... 101s Setting up libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) ... 101s Setting up linux-libc-dev:amd64 (6.14.0-10.10) ... 101s Setting up libctf-nobfd0:amd64 (2.44-3ubuntu1) ... 101s Setting up systemd (257.3-1ubuntu3) ... 101s /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring. 101s Created symlink '/run/systemd/system/tmp.mount' → '/dev/null'. 101s /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring. 101s Setting up libparted2t64:amd64 (3.6-5) ... 101s Removing 'diversion of /lib/x86_64-linux-gnu/libparted.so.2 to /lib/x86_64-linux-gnu/libparted.so.2.usr-is-merged by libparted2t64' 101s Removing 'diversion of /lib/x86_64-linux-gnu/libparted.so.2.0.5 to /lib/x86_64-linux-gnu/libparted.so.2.0.5.usr-is-merged by libparted2t64' 101s Setting up linux-headers-generic (6.14.0-10.10) ... 101s Setting up libjemalloc2:amd64 (5.3.0-3) ... 101s Setting up locales (2.41-1ubuntu1) ... 101s Installing new version of config file /etc/locale.alias ... 102s Generating locales (this might take a while)... 104s en_US.UTF-8... done 104s Generation complete. 104s Setting up libsframe1:amd64 (2.44-3ubuntu1) ... 104s Setting up libpython3.13-minimal:amd64 (3.13.2-2) ... 104s Setting up apparmor (4.1.0~beta5-0ubuntu8) ... 104s Installing new version of config file /etc/apparmor.d/fusermount3 ... 104s Installing new version of config file /etc/apparmor.d/lsusb ... 104s Installing new version of config file /etc/apparmor.d/openvpn ... 105s Reloading AppArmor profiles 106s Setting up libftdi1-2:amd64 (1.5-8build1) ... 106s Setting up libglib2.0-data (2.84.0-1) ... 106s Setting up systemd-cryptsetup (257.3-1ubuntu3) ... 106s Setting up libncurses6:amd64 (6.5+20250216-2) ... 106s Setting up strace (6.13+ds-1ubuntu1) ... 106s Setting up xz-utils (5.6.4-1) ... 106s Setting up systemd-timesyncd (257.3-1ubuntu3) ... 107s systemd-time-wait-sync.service is a disabled or a static unit not running, not starting it. 107s Setting up libatomic1:amd64 (15-20250222-0ubuntu1) ... 107s Setting up udev (257.3-1ubuntu3) ... 108s Setting up linux-modules-6.14.0-10-generic (6.14.0-10.10) ... 110s Setting up libncursesw6:amd64 (6.5+20250216-2) ... 110s Setting up libpci3:amd64 (1:3.13.0-2) ... 110s Setting up whiptail (0.52.24-4ubuntu2) ... 110s Setting up python-apt-common (2.9.9build1) ... 110s Setting up pnp.ids (0.393-3) ... 110s Setting up libnl-3-200:amd64 (3.7.0-1) ... 110s Setting up python3.13-minimal (3.13.2-2) ... 110s Setting up libgpgme11t64:amd64 (1.24.2-1ubuntu2) ... 110s Setting up libbinutils:amd64 (2.44-3ubuntu1) ... 110s Setting up libc-dev-bin (2.41-1ubuntu1) ... 110s Setting up libpython3.13-stdlib:amd64 (3.13.2-2) ... 110s Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2ubuntu5) ... 110s Setting up rsync (3.4.1+ds1-3) ... 111s rsync.service is a disabled or a static unit not running, not starting it. 111s Setting up python3.13-gdbm (3.13.2-2) ... 111s Setting up libpython3-stdlib:amd64 (3.13.2-2) ... 111s Setting up systemd-resolved (257.3-1ubuntu3) ... 111s Setting up initramfs-tools-bin (0.146ubuntu1) ... 111s Setting up ncurses-term (6.5+20250216-2) ... 111s Setting up libctf0:amd64 (2.44-3ubuntu1) ... 111s Setting up libpython3.13:amd64 (3.13.2-2) ... 111s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 111s Setting up libdebuginfod1t64:amd64 (0.192-4) ... 111s Setting up systemd-sysv (257.3-1ubuntu3) ... 111s Setting up linux-headers-virtual (6.14.0-10.10) ... 111s Setting up libcurl4t64:amd64 (8.12.1-3ubuntu1) ... 111s Setting up python3.13 (3.13.2-2) ... 112s Setting up htop (3.4.0-2) ... 112s Setting up linux-image-6.14.0-10-generic (6.14.0-10.10) ... 114s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.12.0-16-generic 114s I: /boot/initrd.img.old is now a symlink to initrd.img-6.12.0-16-generic 114s I: /boot/vmlinuz is now a symlink to vmlinuz-6.14.0-10-generic 114s I: /boot/initrd.img is now a symlink to initrd.img-6.14.0-10-generic 114s Setting up parted (3.6-5) ... 114s Setting up libnss-systemd:amd64 (257.3-1ubuntu3) ... 114s Setting up python3 (3.13.2-2) ... 115s Setting up python3-newt:amd64 (0.52.24-4ubuntu2) ... 115s Setting up python3-markupsafe (2.1.5-1build4) ... 115s Setting up linux-modules-extra-6.14.0-10-generic (6.14.0-10.10) ... 117s Setting up libnl-route-3-200:amd64 (3.7.0-1) ... 117s Setting up hwdata (0.393-3) ... 117s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 117s Setting up libglib2.0-0t64:amd64 (2.84.0-1) ... 117s No schema files found: doing nothing. 117s Setting up libgprofng0:amd64 (2.44-3ubuntu1) ... 117s Setting up linux-perf (6.14.0-10.10) ... 117s Setting up gir1.2-glib-2.0:amd64 (2.84.0-1) ... 117s Setting up pciutils (1:3.13.0-2) ... 117s Setting up python3-rpds-py (0.21.0-2ubuntu2) ... 117s Setting up libmm-glib0:amd64 (1.23.4-0ubuntu3) ... 117s Setting up libnl-genl-3-200:amd64 (3.7.0-1) ... 117s Setting up libpam-systemd:amd64 (257.3-1ubuntu3) ... 117s Setting up libc6-dev:amd64 (2.41-1ubuntu1) ... 117s Setting up libgirepository-1.0-1:amd64 (1.83.4-1) ... 117s Setting up curl (8.12.1-3ubuntu1) ... 117s Setting up linux-image-virtual (6.14.0-10.10) ... 117s Setting up initramfs-tools-core (0.146ubuntu1) ... 117s Setting up linux-tools-common (6.14.0-10.10) ... 117s Setting up python3-systemd (235-1build6) ... 117s Setting up python3-cffi-backend:amd64 (1.17.1-2build2) ... 117s Setting up binutils-x86-64-linux-gnu (2.44-3ubuntu1) ... 117s Setting up linux-image-generic (6.14.0-10.10) ... 117s Setting up python3-dbus (1.3.2-5build5) ... 117s Setting up linux-tools-6.14.0-10 (6.14.0-10.10) ... 117s Setting up initramfs-tools (0.146ubuntu1) ... 117s Installing new version of config file /etc/kernel/postinst.d/initramfs-tools ... 117s Installing new version of config file /etc/kernel/postrm.d/initramfs-tools ... 117s update-initramfs: deferring update (trigger activated) 117s Setting up linux-generic (6.14.0-10.10) ... 117s Setting up ubuntu-minimal (1.549) ... 117s Setting up python3-apt (2.9.9build1) ... 118s Setting up python3-bcrypt (4.2.0-2.1build1) ... 118s Setting up python3-yaml (6.0.2-1build2) ... 118s Setting up libfwupd3:amd64 (2.0.6-4) ... 118s Setting up python3-lazr.uri (1.0.6-6) ... 118s Setting up binutils (2.44-3ubuntu1) ... 118s Setting up ubuntu-standard (1.549) ... 118s Setting up cloud-init-base (25.1-0ubuntu3) ... 119s Setting up linux-virtual (6.14.0-10.10) ... 119s Setting up gir1.2-girepository-2.0:amd64 (1.83.4-1) ... 119s Setting up python3-gi (3.50.0-4build1) ... 119s Setting up linux-tools-6.14.0-10-generic (6.14.0-10.10) ... 119s Setting up fwupd (2.0.6-4) ... 120s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 120s fwupd.service is a disabled or a static unit not running, not starting it. 120s Setting up cloud-init (25.1-0ubuntu3) ... 120s Processing triggers for man-db (2.13.0-1) ... 122s Processing triggers for dbus (1.16.2-1ubuntu1) ... 122s Processing triggers for shared-mime-info (2.4-5) ... 122s Warning: program compiled against libxml 212 using older 209 122s Processing triggers for libc-bin (2.41-1ubuntu1) ... 122s Processing triggers for linux-image-6.14.0-10-generic (6.14.0-10.10) ... 122s /etc/kernel/postinst.d/initramfs-tools: 122s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 122s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 132s /etc/kernel/postinst.d/zz-update-grub: 132s Sourcing file `/etc/default/grub' 132s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 132s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 132s Generating grub configuration file ... 132s Found linux image: /boot/vmlinuz-6.14.0-10-generic 132s Found initrd image: /boot/initrd.img-6.14.0-10-generic 132s Found linux image: /boot/vmlinuz-6.12.0-16-generic 132s Found initrd image: /boot/initrd.img-6.12.0-16-generic 132s Found linux image: /boot/vmlinuz-6.11.0-8-generic 132s Found initrd image: /boot/initrd.img-6.11.0-8-generic 132s Warning: os-prober will not be executed to detect other bootable partitions. 132s Systems on them will not be added to the GRUB boot configuration. 132s Check GRUB_DISABLE_OS_PROBER documentation entry. 132s Adding boot menu entry for UEFI Firmware Settings ... 132s done 132s Processing triggers for initramfs-tools (0.146ubuntu1) ... 132s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 132s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 143s Reading package lists... 144s Building dependency tree... 144s Reading state information... 144s Solving dependencies... 144s The following packages will be REMOVED: 144s libnl-genl-3-200* libnsl2* libpython3.12-minimal* libpython3.12-stdlib* 144s libpython3.12t64* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 144s linux-headers-6.12.0-16* linux-headers-6.12.0-16-generic* 144s linux-image-6.11.0-8-generic* linux-image-6.12.0-16-generic* 144s linux-modules-6.11.0-8-generic* linux-modules-6.12.0-16-generic* 144s linux-modules-extra-6.12.0-16-generic* linux-tools-6.11.0-8* 144s linux-tools-6.11.0-8-generic* linux-tools-6.12.0-16* 144s linux-tools-6.12.0-16-generic* 144s 0 upgraded, 0 newly installed, 18 to remove and 5 not upgraded. 144s After this operation, 545 MB disk space will be freed. 144s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 148643 files and directories currently installed.) 144s Removing libnl-genl-3-200:amd64 (3.7.0-1) ... 144s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 144s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 144s Removing libpython3.12t64:amd64 (3.12.9-1) ... 144s Removing libpython3.12-stdlib:amd64 (3.12.9-1) ... 145s Removing libnsl2:amd64 (1.3.0-3build3) ... 145s Removing libpython3.12-minimal:amd64 (3.12.9-1) ... 145s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 145s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 148s Removing linux-headers-6.12.0-16-generic (6.12.0-16.16) ... 148s Removing linux-headers-6.12.0-16 (6.12.0-16.16) ... 150s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 150s /etc/kernel/postrm.d/initramfs-tools: 150s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 151s /etc/kernel/postrm.d/zz-update-grub: 151s Sourcing file `/etc/default/grub' 151s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 151s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 151s Generating grub configuration file ... 151s Found linux image: /boot/vmlinuz-6.14.0-10-generic 151s Found initrd image: /boot/initrd.img-6.14.0-10-generic 151s Found linux image: /boot/vmlinuz-6.12.0-16-generic 151s Found initrd image: /boot/initrd.img-6.12.0-16-generic 151s Warning: os-prober will not be executed to detect other bootable partitions. 151s Systems on them will not be added to the GRUB boot configuration. 151s Check GRUB_DISABLE_OS_PROBER documentation entry. 151s Adding boot menu entry for UEFI Firmware Settings ... 151s done 151s Removing linux-image-6.12.0-16-generic (6.12.0-16.16) ... 152s W: Removing the running kernel 152s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic 152s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic 152s /etc/kernel/postrm.d/initramfs-tools: 152s update-initramfs: Deleting /boot/initrd.img-6.12.0-16-generic 152s /etc/kernel/postrm.d/zz-update-grub: 152s Sourcing file `/etc/default/grub' 152s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 152s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 152s Generating grub configuration file ... 152s Found linux image: /boot/vmlinuz-6.14.0-10-generic 152s Found initrd image: /boot/initrd.img-6.14.0-10-generic 152s Warning: os-prober will not be executed to detect other bootable partitions. 152s Systems on them will not be added to the GRUB boot configuration. 152s Check GRUB_DISABLE_OS_PROBER documentation entry. 152s Adding boot menu entry for UEFI Firmware Settings ... 152s done 152s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 152s Removing linux-modules-extra-6.12.0-16-generic (6.12.0-16.16) ... 154s Removing linux-modules-6.12.0-16-generic (6.12.0-16.16) ... 154s Removing linux-tools-6.12.0-16-generic (6.12.0-16.16) ... 154s Removing linux-tools-6.12.0-16 (6.12.0-16.16) ... 154s Processing triggers for libc-bin (2.41-1ubuntu1) ... 154s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76972 files and directories currently installed.) 154s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 154s Purging configuration files for libpython3.12-minimal:amd64 (3.12.9-1) ... 154s Purging configuration files for linux-modules-extra-6.12.0-16-generic (6.12.0-16.16) ... 154s Purging configuration files for linux-modules-6.12.0-16-generic (6.12.0-16.16) ... 154s dpkg: warning: while removing linux-modules-6.12.0-16-generic, directory '/lib/modules/6.12.0-16-generic' not empty so not removed 154s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 154s Purging configuration files for linux-image-6.12.0-16-generic (6.12.0-16.16) ... 155s rmdir: failed to remove '/lib/modules/6.12.0-16-generic': Directory not empty 155s autopkgtest [22:00:44]: upgrading testbed (apt dist-upgrade and autopurge) 155s Reading package lists... 155s Building dependency tree... 155s Reading state information... 156s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 156s Starting 2 pkgProblemResolver with broken count: 0 156s Done 156s Entering ResolveByKeep 156s 157s Calculating upgrade... 157s The following packages will be upgraded: 157s libc-bin libc-dev-bin libc6 libc6-dev locales 157s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 157s Need to get 10.5 MB of archives. 157s After this operation, 1024 B of additional disk space will be used. 157s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6-dev amd64 2.41-1ubuntu2 [2183 kB] 158s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-dev-bin amd64 2.41-1ubuntu2 [24.7 kB] 158s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6 amd64 2.41-1ubuntu2 [3327 kB] 158s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-bin amd64 2.41-1ubuntu2 [700 kB] 158s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 locales all 2.41-1ubuntu2 [4246 kB] 158s Preconfiguring packages ... 158s Fetched 10.5 MB in 1s (7724 kB/s) 159s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 159s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_amd64.deb ... 159s Unpacking libc6-dev:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 159s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_amd64.deb ... 159s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 159s Preparing to unpack .../libc6_2.41-1ubuntu2_amd64.deb ... 159s Unpacking libc6:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 159s Setting up libc6:amd64 (2.41-1ubuntu2) ... 159s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 159s Preparing to unpack .../libc-bin_2.41-1ubuntu2_amd64.deb ... 159s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 159s Setting up libc-bin (2.41-1ubuntu2) ... 159s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 159s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 159s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 160s Setting up locales (2.41-1ubuntu2) ... 160s Generating locales (this might take a while)... 162s en_US.UTF-8... done 162s Generation complete. 162s Setting up libc-dev-bin (2.41-1ubuntu2) ... 162s Setting up libc6-dev:amd64 (2.41-1ubuntu2) ... 162s Processing triggers for man-db (2.13.0-1) ... 162s Processing triggers for systemd (257.3-1ubuntu3) ... 163s Reading package lists... 164s Building dependency tree... 164s Reading state information... 164s Starting pkgProblemResolver with broken count: 0 164s Starting 2 pkgProblemResolver with broken count: 0 164s Done 164s Solving dependencies... 164s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 164s autopkgtest [22:00:53]: rebooting testbed after setup commands that affected boot 188s autopkgtest [22:01:17]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 16:07:00 UTC 2025 190s autopkgtest [22:01:19]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-dirichletmultinomial 193s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-dirichletmultinomial 1.48.0-2 (dsc) [2309 B] 193s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-dirichletmultinomial 1.48.0-2 (tar) [1112 kB] 193s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-dirichletmultinomial 1.48.0-2 (diff) [3116 B] 193s gpgv: Signature made Sun Jan 12 11:32:21 2025 UTC 193s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 193s gpgv: issuer "crusoe@debian.org" 193s gpgv: Can't check signature: No public key 193s dpkg-source: warning: cannot verify inline signature for ./r-bioc-dirichletmultinomial_1.48.0-2.dsc: no acceptable signature found 193s autopkgtest [22:01:22]: testing package r-bioc-dirichletmultinomial version 1.48.0-2 193s autopkgtest [22:01:22]: build not needed 196s autopkgtest [22:01:25]: test pkg-r-autopkgtest: preparing testbed 196s Reading package lists... 196s Building dependency tree... 196s Reading state information... 197s Starting pkgProblemResolver with broken count: 0 197s Starting 2 pkgProblemResolver with broken count: 0 197s Done 197s The following NEW packages will be installed: 197s build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu 197s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 197s fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax 197s g++ g++-14 g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 197s gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-14 197s gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools 197s javascript-common libasan8 libbibtex-parser-perl libblas-dev libblas3 197s libbz2-dev libcairo2 libcc1-0 libdatrie1 libdeflate-dev libdeflate0 197s libfontconfig1 libgcc-14-dev libgfortran-14-dev libgfortran5 libgomp1 198s libgraphite2-3 libgsl28 libgslcblas0 libharfbuzz0b libhwasan0 libice6 198s libicu-dev libio-string-perl libisl23 libitm1 libjbig0 libjpeg-dev 198s libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap 198s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 198s libjs-jquery-datatables libjs-jquery-datatables-extensions 198s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 198s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 198s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 198s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4 198s liblsan0 liblua5.4-0 liblzma-dev libmpc3 libmpfi0 libncurses-dev 198s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 198s libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 198s libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libptexenc1 libquadmath0 198s libreadline-dev libsharpyuv0 libsm6 libstdc++-14-dev libsynctex2 libtcl8.6 198s libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev 198s libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 198s libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6t64 libzzip-0-13t64 198s littler node-bootstrap-sass node-html5shiv node-normalize.css pandoc 198s pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 198s r-bioc-biocgenerics r-bioc-biocstyle r-bioc-biocversion 198s r-bioc-dirichletmultinomial r-bioc-iranges r-bioc-s4vectors r-cran-base64enc 198s r-cran-biocmanager r-cran-bookdown r-cran-bslib r-cran-cachem r-cran-cli 198s r-cran-commonmark r-cran-crayon r-cran-crosstalk r-cran-digest r-cran-dt 198s r-cran-evaluate r-cran-fastmap r-cran-fontawesome r-cran-fs r-cran-glue 198s r-cran-highr r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv 198s r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-later r-cran-lattice 198s r-cran-lazyeval r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass 198s r-cran-memoise r-cran-mime r-cran-pkgkitten r-cran-promises r-cran-r6 198s r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rlang 198s r-cran-rmarkdown r-cran-sass r-cran-shiny r-cran-sourcetools r-cran-tinytex 198s r-cran-withr r-cran-xfun r-cran-xtable r-cran-yaml t1utils tex-common 198s texlive-base texlive-bibtex-extra texlive-binaries texlive-latex-base unzip 198s x11-common xdg-utils zip zlib1g-dev 198s 0 upgraded, 207 newly installed, 0 to remove and 0 not upgraded. 198s Need to get 338 MB of archives. 198s After this operation, 1061 MB of additional disk space will be used. 198s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 198s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 198s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [11.9 MB] 199s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-17ubuntu3 [1030 B] 199s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [5586 B] 199s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.2.0-1ubuntu1 [22.4 kB] 199s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 15-20250222-0ubuntu1 [47.0 kB] 199s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 15-20250222-0ubuntu1 [148 kB] 199s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 15-20250222-0ubuntu1 [28.6 kB] 199s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 15-20250222-0ubuntu1 [3055 kB] 199s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 15-20250222-0ubuntu1 [1355 kB] 199s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 15-20250222-0ubuntu1 [2756 kB] 199s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 15-20250222-0ubuntu1 [1205 kB] 199s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 15-20250222-0ubuntu1 [1677 kB] 199s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 15-20250222-0ubuntu1 [152 kB] 199s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-17ubuntu3 [2816 kB] 199s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [23.3 MB] 200s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-17ubuntu3 [536 kB] 200s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1208 B] 200s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.2.0-1ubuntu1 [5004 B] 200s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-17ubuntu3 [2486 kB] 200s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [13.4 MB] 200s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-17ubuntu3 [21.8 kB] 200s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [968 B] 200s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.2.0-1ubuntu1 [1100 B] 200s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 200s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 dctrl-tools amd64 2.24-3build3 [106 kB] 200s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 200s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 200s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-2ubuntu1 [37.4 kB] 200s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-2ubuntu1 [164 kB] 200s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-2ubuntu1 [180 kB] 200s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 200s Get:34 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 200s Get:35 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-lmodern all 2.005-1 [4799 kB] 201s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 201s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 15-20250222-0ubuntu1 [919 kB] 201s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran-14-dev amd64 14.2.0-17ubuntu3 [966 kB] 201s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [12.6 MB] 201s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14 amd64 14.2.0-17ubuntu3 [13.6 kB] 201s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1022 B] 201s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran amd64 4:14.2.0-1ubuntu1 [1174 B] 201s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 icu-devtools amd64 76.1-1ubuntu2 [237 kB] 201s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 12 [5216 B] 201s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libio-string-perl all 1.08-4 [11.1 kB] 201s Get:46 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblatex-tounicode-perl all 0.55-1 [28.8 kB] 201s Get:47 http://ftpmaster.internal/ubuntu plucky/universe amd64 libbibtex-parser-perl all 1.05+dfsg-1 [16.5 kB] 201s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 201s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas-dev amd64 3.12.1-2 [338 kB] 201s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libbz2-dev amd64 1.0.8-6 [33.8 kB] 201s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 201s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 201s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 201s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 201s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 201s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 201s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB] 201s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate-dev amd64 1.23-1 [71.7 kB] 201s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 201s Get:60 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgslcblas0 amd64 2.8+dfsg-5 [290 kB] 201s Get:61 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgsl28 amd64 2.8+dfsg-5 [1285 kB] 201s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB] 201s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 201s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 201s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libicu-dev amd64 76.1-1ubuntu2 [12.6 MB] 202s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 202s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8-dev amd64 2.1.5-3ubuntu2 [324 kB] 202s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 202s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 202s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 202s Get:71 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 202s Get:72 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 202s Get:73 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 202s Get:74 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 202s Get:75 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 202s Get:76 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 202s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 202s Get:78 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 202s Get:79 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables-extensions all 0.0+git20150910.28fd64e+dfsg-5 [648 kB] 202s Get:80 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 202s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 202s Get:82 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 202s Get:83 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 202s Get:84 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 202s Get:85 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 202s Get:86 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 202s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libkpathsea6 amd64 2024.20240313.70630+ds-6 [67.3 kB] 202s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 202s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack-dev amd64 3.12.1-2 [6489 kB] 202s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 202s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 liblua5.4-0 amd64 5.4.7-1 [196 kB] 202s Get:92 http://ftpmaster.internal/ubuntu plucky/universe amd64 libmpfi0 amd64 1.5.4+ds-4 [35.5 kB] 202s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses-dev amd64 6.5+20250216-2 [424 kB] 202s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 202s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 202s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.56.2-1 [255 kB] 202s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.56.2-1 [52.6 kB] 202s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.56.2-1 [29.1 kB] 202s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB] 202s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB] 202s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.45-1 [268 kB] 202s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-32-0 amd64 10.45-1 [251 kB] 203s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-posix3 amd64 10.45-1 [7204 B] 203s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-dev amd64 10.45-1 [908 kB] 203s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 libpkgconf3 amd64 1.8.1-4 [32.3 kB] 203s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 203s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libpng-dev amd64 1.6.47-1 [298 kB] 203s Get:108 http://ftpmaster.internal/ubuntu plucky/universe amd64 libpotrace0 amd64 1.16-2build1 [17.7 kB] 203s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 libptexenc1 amd64 2024.20240313.70630+ds-6 [43.7 kB] 203s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 libreadline-dev amd64 8.2-6 [184 kB] 203s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 203s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 203s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libsynctex2 amd64 2024.20240313.70630+ds-6 [62.5 kB] 203s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB] 203s Get:115 http://ftpmaster.internal/ubuntu plucky/universe amd64 libteckit0 amd64 2.5.12+ds1-1 [411 kB] 203s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libtexlua53-5 amd64 2024.20240313.70630+ds-6 [145 kB] 203s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 203s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 203s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 203s Get:120 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 203s Get:121 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 203s Get:122 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB] 203s Get:123 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 203s Get:124 http://ftpmaster.internal/ubuntu plucky/main amd64 libxmu6 amd64 2:1.1.3-3build2 [47.6 kB] 203s Get:125 http://ftpmaster.internal/ubuntu plucky/main amd64 libxpm4 amd64 1:3.5.17-1build2 [36.5 kB] 203s Get:126 http://ftpmaster.internal/ubuntu plucky/main amd64 libxaw7 amd64 2:1.0.16-1 [207 kB] 203s Get:127 http://ftpmaster.internal/ubuntu plucky/main amd64 libxi6 amd64 2:1.8.2-1 [32.4 kB] 203s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 libzzip-0-13t64 amd64 0.13.78+dfsg.1-0.1 [30.0 kB] 203s Get:129 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu2 [185 kB] 203s Get:130 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 203s Get:131 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 203s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.3-1 [28.9 MB] 205s Get:133 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-2 [96.6 kB] 205s Get:134 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-2 [2554 B] 205s Get:135 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 205s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 205s Get:137 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 205s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 205s Get:139 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc amd64 3.1.11.1+ds-2 [27.2 MB] 207s Get:140 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma-dev amd64 5.6.4-1 [189 kB] 207s Get:141 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf-bin amd64 1.8.1-4 [21.6 kB] 207s Get:142 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf amd64 1.8.1-4 [16.8 kB] 207s Get:143 http://ftpmaster.internal/ubuntu plucky/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3 [193 kB] 207s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-dev all 4.4.3-1 [4176 B] 207s Get:145 http://ftpmaster.internal/ubuntu plucky/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 207s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 207s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 207s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB] 207s Get:149 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 207s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.5-1 [1719 kB] 207s Get:151 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 207s Get:152 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 1.0.3-1 [114 kB] 207s Get:153 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xfun amd64 0.51+dfsg-1 [574 kB] 207s Get:154 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 207s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB] 207s Get:156 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 208s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 208s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 208s Get:159 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 208s Get:160 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB] 208s Get:161 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB] 208s Get:162 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 208s Get:163 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 208s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 208s Get:165 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 208s Get:166 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB] 208s Get:167 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB] 208s Get:168 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 208s Get:169 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 208s Get:170 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 208s Get:171 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 208s Get:172 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tinytex all 0.56-1 [148 kB] 208s Get:173 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-modernizr all 3.13.0-0.1 [101 kB] 208s Get:174 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 208s Get:175 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.14-1 [1998 kB] 209s Get:176 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB] 209s Get:177 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 209s Get:178 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB] 209s Get:179 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 209s Get:180 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 209s Get:181 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 209s Get:182 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB] 209s Get:183 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 209s Get:184 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.2-2 [137 kB] 209s Get:185 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 209s Get:186 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 209s Get:187 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 209s Get:188 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bookdown all 0.42+dfsg-1 [1409 kB] 209s Get:189 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 209s Get:190 http://ftpmaster.internal/ubuntu plucky/universe amd64 tex-common all 6.19 [29.8 kB] 209s Get:191 http://ftpmaster.internal/ubuntu plucky/main amd64 t1utils amd64 1.41-4build3 [61.3 kB] 209s Get:192 http://ftpmaster.internal/ubuntu plucky/universe amd64 texlive-binaries amd64 2024.20240313.70630+ds-6 [9789 kB] 210s Get:193 http://ftpmaster.internal/ubuntu plucky/universe amd64 texlive-base all 2024.20250114-1 [22.5 MB] 211s Get:194 http://ftpmaster.internal/ubuntu plucky/universe amd64 texlive-latex-base all 2024.20250114-1 [1264 kB] 211s Get:195 http://ftpmaster.internal/ubuntu plucky/universe amd64 texlive-bibtex-extra all 2024.20250114-1 [79.5 MB] 217s Get:196 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocversion all 3.20.0-2 [11.1 kB] 217s Get:197 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocstyle all 2.34.0+dfsg-1 [451 kB] 217s Get:198 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2065 kB] 217s Get:199 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-iranges amd64 2.40.1-2 [2310 kB] 217s Get:200 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-dirichletmultinomial amd64 1.48.0-2 [1260 kB] 217s Get:201 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lazyeval amd64 0.2.2-1build1 [144 kB] 217s Get:202 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 217s Get:203 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 218s Get:204 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dt all 0.33+dfsg-1 [250 kB] 218s Get:205 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 218s Get:206 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mass amd64 7.3-64-1 [1114 kB] 218s Get:207 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 218s Preconfiguring packages ... 218s Fetched 338 MB in 20s (16.7 MB/s) 218s Selecting previously unselected package libisl23:amd64. 219s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 219s Preparing to unpack .../000-libisl23_0.27-1_amd64.deb ... 219s Unpacking libisl23:amd64 (0.27-1) ... 219s Selecting previously unselected package libmpc3:amd64. 219s Preparing to unpack .../001-libmpc3_1.3.1-1build2_amd64.deb ... 219s Unpacking libmpc3:amd64 (1.3.1-1build2) ... 219s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 219s Preparing to unpack .../002-cpp-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 219s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 219s Selecting previously unselected package cpp-14. 219s Preparing to unpack .../003-cpp-14_14.2.0-17ubuntu3_amd64.deb ... 219s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 219s Selecting previously unselected package cpp-x86-64-linux-gnu. 219s Preparing to unpack .../004-cpp-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 219s Unpacking cpp-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 219s Selecting previously unselected package cpp. 219s Preparing to unpack .../005-cpp_4%3a14.2.0-1ubuntu1_amd64.deb ... 219s Unpacking cpp (4:14.2.0-1ubuntu1) ... 219s Selecting previously unselected package libcc1-0:amd64. 219s Preparing to unpack .../006-libcc1-0_15-20250222-0ubuntu1_amd64.deb ... 219s Unpacking libcc1-0:amd64 (15-20250222-0ubuntu1) ... 219s Selecting previously unselected package libgomp1:amd64. 219s Preparing to unpack .../007-libgomp1_15-20250222-0ubuntu1_amd64.deb ... 219s Unpacking libgomp1:amd64 (15-20250222-0ubuntu1) ... 219s Selecting previously unselected package libitm1:amd64. 219s Preparing to unpack .../008-libitm1_15-20250222-0ubuntu1_amd64.deb ... 219s Unpacking libitm1:amd64 (15-20250222-0ubuntu1) ... 219s Selecting previously unselected package libasan8:amd64. 219s Preparing to unpack .../009-libasan8_15-20250222-0ubuntu1_amd64.deb ... 219s Unpacking libasan8:amd64 (15-20250222-0ubuntu1) ... 219s Selecting previously unselected package liblsan0:amd64. 219s Preparing to unpack .../010-liblsan0_15-20250222-0ubuntu1_amd64.deb ... 219s Unpacking liblsan0:amd64 (15-20250222-0ubuntu1) ... 219s Selecting previously unselected package libtsan2:amd64. 219s Preparing to unpack .../011-libtsan2_15-20250222-0ubuntu1_amd64.deb ... 219s Unpacking libtsan2:amd64 (15-20250222-0ubuntu1) ... 219s Selecting previously unselected package libubsan1:amd64. 219s Preparing to unpack .../012-libubsan1_15-20250222-0ubuntu1_amd64.deb ... 219s Unpacking libubsan1:amd64 (15-20250222-0ubuntu1) ... 219s Selecting previously unselected package libhwasan0:amd64. 219s Preparing to unpack .../013-libhwasan0_15-20250222-0ubuntu1_amd64.deb ... 219s Unpacking libhwasan0:amd64 (15-20250222-0ubuntu1) ... 219s Selecting previously unselected package libquadmath0:amd64. 219s Preparing to unpack .../014-libquadmath0_15-20250222-0ubuntu1_amd64.deb ... 219s Unpacking libquadmath0:amd64 (15-20250222-0ubuntu1) ... 219s Selecting previously unselected package libgcc-14-dev:amd64. 219s Preparing to unpack .../015-libgcc-14-dev_14.2.0-17ubuntu3_amd64.deb ... 219s Unpacking libgcc-14-dev:amd64 (14.2.0-17ubuntu3) ... 219s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 219s Preparing to unpack .../016-gcc-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 219s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 220s Selecting previously unselected package gcc-14. 220s Preparing to unpack .../017-gcc-14_14.2.0-17ubuntu3_amd64.deb ... 220s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 220s Selecting previously unselected package gcc-x86-64-linux-gnu. 220s Preparing to unpack .../018-gcc-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 220s Unpacking gcc-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 220s Selecting previously unselected package gcc. 220s Preparing to unpack .../019-gcc_4%3a14.2.0-1ubuntu1_amd64.deb ... 220s Unpacking gcc (4:14.2.0-1ubuntu1) ... 220s Selecting previously unselected package libstdc++-14-dev:amd64. 220s Preparing to unpack .../020-libstdc++-14-dev_14.2.0-17ubuntu3_amd64.deb ... 220s Unpacking libstdc++-14-dev:amd64 (14.2.0-17ubuntu3) ... 220s Selecting previously unselected package g++-14-x86-64-linux-gnu. 220s Preparing to unpack .../021-g++-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 220s Unpacking g++-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 220s Selecting previously unselected package g++-14. 220s Preparing to unpack .../022-g++-14_14.2.0-17ubuntu3_amd64.deb ... 220s Unpacking g++-14 (14.2.0-17ubuntu3) ... 220s Selecting previously unselected package g++-x86-64-linux-gnu. 220s Preparing to unpack .../023-g++-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 220s Unpacking g++-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 220s Selecting previously unselected package g++. 220s Preparing to unpack .../024-g++_4%3a14.2.0-1ubuntu1_amd64.deb ... 220s Unpacking g++ (4:14.2.0-1ubuntu1) ... 220s Selecting previously unselected package build-essential. 220s Preparing to unpack .../025-build-essential_12.10ubuntu1_amd64.deb ... 220s Unpacking build-essential (12.10ubuntu1) ... 220s Selecting previously unselected package dctrl-tools. 220s Preparing to unpack .../026-dctrl-tools_2.24-3build3_amd64.deb ... 221s Unpacking dctrl-tools (2.24-3build3) ... 221s Selecting previously unselected package fonts-dejavu-mono. 221s Preparing to unpack .../027-fonts-dejavu-mono_2.37-8_all.deb ... 221s Unpacking fonts-dejavu-mono (2.37-8) ... 221s Selecting previously unselected package fonts-dejavu-core. 221s Preparing to unpack .../028-fonts-dejavu-core_2.37-8_all.deb ... 221s Unpacking fonts-dejavu-core (2.37-8) ... 221s Selecting previously unselected package fontconfig-config. 221s Preparing to unpack .../029-fontconfig-config_2.15.0-2ubuntu1_amd64.deb ... 221s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 221s Selecting previously unselected package libfontconfig1:amd64. 221s Preparing to unpack .../030-libfontconfig1_2.15.0-2ubuntu1_amd64.deb ... 221s Unpacking libfontconfig1:amd64 (2.15.0-2ubuntu1) ... 221s Selecting previously unselected package fontconfig. 221s Preparing to unpack .../031-fontconfig_2.15.0-2ubuntu1_amd64.deb ... 221s Unpacking fontconfig (2.15.0-2ubuntu1) ... 221s Selecting previously unselected package fonts-font-awesome. 221s Preparing to unpack .../032-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 221s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 221s Selecting previously unselected package fonts-glyphicons-halflings. 221s Preparing to unpack .../033-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 221s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 221s Selecting previously unselected package fonts-lmodern. 221s Preparing to unpack .../034-fonts-lmodern_2.005-1_all.deb ... 221s Unpacking fonts-lmodern (2.005-1) ... 221s Selecting previously unselected package fonts-mathjax. 221s Preparing to unpack .../035-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 221s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 221s Selecting previously unselected package libgfortran5:amd64. 221s Preparing to unpack .../036-libgfortran5_15-20250222-0ubuntu1_amd64.deb ... 221s Unpacking libgfortran5:amd64 (15-20250222-0ubuntu1) ... 221s Selecting previously unselected package libgfortran-14-dev:amd64. 221s Preparing to unpack .../037-libgfortran-14-dev_14.2.0-17ubuntu3_amd64.deb ... 221s Unpacking libgfortran-14-dev:amd64 (14.2.0-17ubuntu3) ... 221s Selecting previously unselected package gfortran-14-x86-64-linux-gnu. 221s Preparing to unpack .../038-gfortran-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 221s Unpacking gfortran-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 221s Selecting previously unselected package gfortran-14. 221s Preparing to unpack .../039-gfortran-14_14.2.0-17ubuntu3_amd64.deb ... 221s Unpacking gfortran-14 (14.2.0-17ubuntu3) ... 221s Selecting previously unselected package gfortran-x86-64-linux-gnu. 221s Preparing to unpack .../040-gfortran-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 221s Unpacking gfortran-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 221s Selecting previously unselected package gfortran. 221s Preparing to unpack .../041-gfortran_4%3a14.2.0-1ubuntu1_amd64.deb ... 221s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 222s Selecting previously unselected package icu-devtools. 222s Preparing to unpack .../042-icu-devtools_76.1-1ubuntu2_amd64.deb ... 222s Unpacking icu-devtools (76.1-1ubuntu2) ... 222s Selecting previously unselected package javascript-common. 222s Preparing to unpack .../043-javascript-common_12_all.deb ... 222s Unpacking javascript-common (12) ... 222s Selecting previously unselected package libio-string-perl. 222s Preparing to unpack .../044-libio-string-perl_1.08-4_all.deb ... 222s Unpacking libio-string-perl (1.08-4) ... 222s Selecting previously unselected package liblatex-tounicode-perl. 222s Preparing to unpack .../045-liblatex-tounicode-perl_0.55-1_all.deb ... 222s Unpacking liblatex-tounicode-perl (0.55-1) ... 222s Selecting previously unselected package libbibtex-parser-perl. 222s Preparing to unpack .../046-libbibtex-parser-perl_1.05+dfsg-1_all.deb ... 222s Unpacking libbibtex-parser-perl (1.05+dfsg-1) ... 222s Selecting previously unselected package libblas3:amd64. 222s Preparing to unpack .../047-libblas3_3.12.1-2_amd64.deb ... 222s Unpacking libblas3:amd64 (3.12.1-2) ... 222s Selecting previously unselected package libblas-dev:amd64. 222s Preparing to unpack .../048-libblas-dev_3.12.1-2_amd64.deb ... 222s Unpacking libblas-dev:amd64 (3.12.1-2) ... 222s Selecting previously unselected package libbz2-dev:amd64. 222s Preparing to unpack .../049-libbz2-dev_1.0.8-6_amd64.deb ... 222s Unpacking libbz2-dev:amd64 (1.0.8-6) ... 222s Selecting previously unselected package libpixman-1-0:amd64. 222s Preparing to unpack .../050-libpixman-1-0_0.44.0-3_amd64.deb ... 222s Unpacking libpixman-1-0:amd64 (0.44.0-3) ... 222s Selecting previously unselected package libxcb-render0:amd64. 222s Preparing to unpack .../051-libxcb-render0_1.17.0-2_amd64.deb ... 222s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 222s Selecting previously unselected package libxcb-shm0:amd64. 222s Preparing to unpack .../052-libxcb-shm0_1.17.0-2_amd64.deb ... 222s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 222s Selecting previously unselected package libxrender1:amd64. 222s Preparing to unpack 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223s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 223s Selecting previously unselected package liblua5.4-0:amd64. 223s Preparing to unpack .../090-liblua5.4-0_5.4.7-1_amd64.deb ... 223s Unpacking liblua5.4-0:amd64 (5.4.7-1) ... 224s Selecting previously unselected package libmpfi0:amd64. 224s Preparing to unpack .../091-libmpfi0_1.5.4+ds-4_amd64.deb ... 224s Unpacking libmpfi0:amd64 (1.5.4+ds-4) ... 224s Selecting previously unselected package libncurses-dev:amd64. 224s Preparing to unpack .../092-libncurses-dev_6.5+20250216-2_amd64.deb ... 224s Unpacking libncurses-dev:amd64 (6.5+20250216-2) ... 224s Selecting previously unselected package libthai-data. 224s Preparing to unpack .../093-libthai-data_0.1.29-2build1_all.deb ... 224s Unpacking libthai-data (0.1.29-2build1) ... 224s Selecting previously unselected package libthai0:amd64. 224s Preparing to unpack .../094-libthai0_0.1.29-2build1_amd64.deb ... 224s Unpacking libthai0:amd64 (0.1.29-2build1) ... 224s Selecting previously unselected package libpango-1.0-0:amd64. 224s Preparing to unpack .../095-libpango-1.0-0_1.56.2-1_amd64.deb ... 224s Unpacking libpango-1.0-0:amd64 (1.56.2-1) ... 224s Selecting previously unselected package libpangoft2-1.0-0:amd64. 224s Preparing to unpack .../096-libpangoft2-1.0-0_1.56.2-1_amd64.deb ... 224s Unpacking libpangoft2-1.0-0:amd64 (1.56.2-1) ... 224s Selecting previously unselected package libpangocairo-1.0-0:amd64. 224s Preparing to unpack .../097-libpangocairo-1.0-0_1.56.2-1_amd64.deb ... 224s Unpacking libpangocairo-1.0-0:amd64 (1.56.2-1) ... 224s Selecting previously unselected package libpaper2:amd64. 224s Preparing to unpack .../098-libpaper2_2.2.5-0.3_amd64.deb ... 224s Unpacking libpaper2:amd64 (2.2.5-0.3) ... 224s Selecting previously unselected package libpaper-utils. 224s Preparing to unpack .../099-libpaper-utils_2.2.5-0.3_amd64.deb ... 224s Unpacking libpaper-utils (2.2.5-0.3) ... 224s Selecting previously unselected package libpcre2-16-0:amd64. 224s Preparing 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(1.5.0-0.1) ... 224s Selecting previously unselected package libsm6:amd64. 224s Preparing to unpack .../111-libsm6_2%3a1.2.4-1_amd64.deb ... 224s Unpacking libsm6:amd64 (2:1.2.4-1) ... 224s Selecting previously unselected package libsynctex2:amd64. 224s Preparing to unpack .../112-libsynctex2_2024.20240313.70630+ds-6_amd64.deb ... 224s Unpacking libsynctex2:amd64 (2024.20240313.70630+ds-6) ... 224s Selecting previously unselected package libtcl8.6:amd64. 224s Preparing to unpack .../113-libtcl8.6_8.6.16+dfsg-1_amd64.deb ... 224s Unpacking libtcl8.6:amd64 (8.6.16+dfsg-1) ... 224s Selecting previously unselected package libteckit0:amd64. 224s Preparing to unpack .../114-libteckit0_2.5.12+ds1-1_amd64.deb ... 224s Unpacking libteckit0:amd64 (2.5.12+ds1-1) ... 224s Selecting previously unselected package libtexlua53-5:amd64. 224s Preparing to unpack .../115-libtexlua53-5_2024.20240313.70630+ds-6_amd64.deb ... 224s Unpacking libtexlua53-5:amd64 (2024.20240313.70630+ds-6) ... 224s Selecting previously unselected package libjbig0:amd64. 224s Preparing to unpack .../116-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 224s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 224s Selecting previously unselected package libwebp7:amd64. 224s Preparing to unpack .../117-libwebp7_1.5.0-0.1_amd64.deb ... 224s Unpacking libwebp7:amd64 (1.5.0-0.1) ... 224s Selecting previously unselected package libtiff6:amd64. 224s Preparing to unpack .../118-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ... 224s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 224s Selecting previously unselected package libxft2:amd64. 224s Preparing to unpack .../119-libxft2_2.3.6-1build1_amd64.deb ... 224s Unpacking libxft2:amd64 (2.3.6-1build1) ... 224s Selecting previously unselected package libxss1:amd64. 224s Preparing to unpack .../120-libxss1_1%3a1.2.3-1build3_amd64.deb ... 224s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 224s Selecting previously unselected package libtk8.6:amd64. 224s Preparing to unpack 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Selecting previously unselected package libzzip-0-13t64:amd64. 225s Preparing to unpack .../127-libzzip-0-13t64_0.13.78+dfsg.1-0.1_amd64.deb ... 225s Unpacking libzzip-0-13t64:amd64 (0.13.78+dfsg.1-0.1) ... 225s Selecting previously unselected package zip. 225s Preparing to unpack .../128-zip_3.0-14ubuntu2_amd64.deb ... 225s Unpacking zip (3.0-14ubuntu2) ... 225s Selecting previously unselected package unzip. 225s Preparing to unpack .../129-unzip_6.0-28ubuntu6_amd64.deb ... 225s Unpacking unzip (6.0-28ubuntu6) ... 225s Selecting previously unselected package xdg-utils. 225s Preparing to unpack .../130-xdg-utils_1.2.1-2ubuntu1_all.deb ... 225s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 225s Selecting previously unselected package r-base-core. 225s Preparing to unpack .../131-r-base-core_4.4.3-1_amd64.deb ... 225s Unpacking r-base-core (4.4.3-1) ... 225s Selecting previously unselected package r-cran-littler. 225s Preparing to unpack .../132-r-cran-littler_0.3.20-2_amd64.deb ... 225s Unpacking r-cran-littler (0.3.20-2) ... 225s Selecting previously unselected package littler. 225s Preparing to unpack .../133-littler_0.3.20-2_all.deb ... 225s Unpacking littler (0.3.20-2) ... 225s Selecting previously unselected package node-bootstrap-sass. 225s Preparing to unpack .../134-node-bootstrap-sass_3.4.3-2_all.deb ... 225s Unpacking node-bootstrap-sass (3.4.3-2) ... 225s Selecting previously unselected package node-html5shiv. 225s Preparing to unpack .../135-node-html5shiv_3.7.3+dfsg-5_all.deb ... 225s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 225s Selecting previously unselected package node-normalize.css. 225s Preparing to unpack .../136-node-normalize.css_8.0.1-5_all.deb ... 225s Unpacking node-normalize.css (8.0.1-5) ... 225s Selecting previously unselected package pandoc-data. 225s Preparing to unpack .../137-pandoc-data_3.1.11.1-3build1_all.deb ... 225s Unpacking pandoc-data (3.1.11.1-3build1) ... 225s Selecting previously unselected package pandoc. 225s Preparing to unpack .../138-pandoc_3.1.11.1+ds-2_amd64.deb ... 225s Unpacking pandoc (3.1.11.1+ds-2) ... 226s Selecting previously unselected package liblzma-dev:amd64. 226s Preparing to unpack .../139-liblzma-dev_5.6.4-1_amd64.deb ... 226s Unpacking liblzma-dev:amd64 (5.6.4-1) ... 226s Selecting previously unselected package pkgconf-bin. 226s Preparing to unpack .../140-pkgconf-bin_1.8.1-4_amd64.deb ... 226s Unpacking pkgconf-bin (1.8.1-4) ... 226s Selecting previously unselected package pkgconf:amd64. 226s Preparing to unpack .../141-pkgconf_1.8.1-4_amd64.deb ... 226s Unpacking pkgconf:amd64 (1.8.1-4) ... 226s Selecting previously unselected package libtirpc-dev:amd64. 226s Preparing to unpack .../142-libtirpc-dev_1.3.4+ds-1.3_amd64.deb ... 226s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1.3) ... 226s Selecting previously unselected package r-base-dev. 226s Preparing to unpack .../143-r-base-dev_4.4.3-1_all.deb ... 226s Unpacking r-base-dev (4.4.3-1) ... 226s Selecting previously unselected package pkg-r-autopkgtest. 226s Preparing to unpack .../144-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 226s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 226s Selecting previously unselected package r-bioc-biocgenerics. 226s Preparing to unpack .../145-r-bioc-biocgenerics_0.52.0-2_all.deb ... 226s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 226s Selecting previously unselected package r-cran-base64enc. 226s Preparing to unpack .../146-r-cran-base64enc_0.1-3-3_amd64.deb ... 226s Unpacking r-cran-base64enc (0.1-3-3) ... 226s Selecting previously unselected package r-cran-digest. 226s Preparing to unpack .../147-r-cran-digest_0.6.37-1_amd64.deb ... 226s Unpacking r-cran-digest (0.6.37-1) ... 226s Selecting previously unselected package r-cran-fastmap. 226s Preparing to unpack .../148-r-cran-fastmap_1.2.0-1_amd64.deb ... 226s Unpacking r-cran-fastmap (1.2.0-1) ... 226s Selecting previously unselected package r-cran-rlang. 226s Preparing to unpack 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package libjs-mathjax. 227s Preparing to unpack .../155-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 227s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 227s Selecting previously unselected package r-cran-knitr. 227s Preparing to unpack .../156-r-cran-knitr_1.49+dfsg-1_all.deb ... 227s Unpacking r-cran-knitr (1.49+dfsg-1) ... 227s Selecting previously unselected package r-cran-cachem. 227s Preparing to unpack .../157-r-cran-cachem_1.1.0-1_amd64.deb ... 227s Unpacking r-cran-cachem (1.1.0-1) ... 227s Selecting previously unselected package r-cran-jquerylib. 227s Preparing to unpack .../158-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 227s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 227s Selecting previously unselected package r-cran-jsonlite. 227s Preparing to unpack .../159-r-cran-jsonlite_1.9.1+dfsg-1_amd64.deb ... 227s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 227s Selecting previously unselected package r-cran-cli. 228s Preparing to unpack .../160-r-cran-cli_3.6.4-1_amd64.deb ... 228s Unpacking r-cran-cli (3.6.4-1) ... 228s Selecting previously unselected package r-cran-glue. 228s Preparing to unpack .../161-r-cran-glue_1.8.0-1_amd64.deb ... 228s Unpacking r-cran-glue (1.8.0-1) ... 228s Selecting previously unselected package r-cran-lifecycle. 228s Preparing to unpack .../162-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 228s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 228s Selecting previously unselected package r-cran-memoise. 228s Preparing to unpack .../163-r-cran-memoise_2.0.1-1_all.deb ... 228s Unpacking r-cran-memoise (2.0.1-1) ... 228s Selecting previously unselected package r-cran-mime. 228s Preparing to unpack .../164-r-cran-mime_0.12-2_amd64.deb ... 228s Unpacking r-cran-mime (0.12-2) ... 228s Selecting previously unselected package r-cran-fs. 228s Preparing to unpack .../165-r-cran-fs_1.6.5+dfsg-1_amd64.deb ... 228s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 228s Selecting previously unselected package r-cran-r6. 228s Preparing to unpack .../166-r-cran-r6_2.6.1-1_all.deb ... 228s Unpacking r-cran-r6 (2.6.1-1) ... 228s Selecting previously unselected package r-cran-rappdirs. 228s Preparing to unpack .../167-r-cran-rappdirs_0.3.3-1_amd64.deb ... 228s Unpacking r-cran-rappdirs (0.3.3-1) ... 228s Selecting previously unselected package r-cran-sass. 228s Preparing to unpack .../168-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 228s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 228s Selecting previously unselected package r-cran-bslib. 228s Preparing to unpack .../169-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 228s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 228s Selecting previously unselected package r-cran-fontawesome. 228s Preparing to unpack .../170-r-cran-fontawesome_0.5.3-1_all.deb ... 228s Unpacking r-cran-fontawesome (0.5.3-1) ... 228s Selecting previously unselected package r-cran-tinytex. 228s Preparing to unpack .../171-r-cran-tinytex_0.56-1_all.deb ... 228s Unpacking r-cran-tinytex (0.56-1) ... 228s Selecting previously unselected package libjs-modernizr. 228s Preparing to unpack .../172-libjs-modernizr_3.13.0-0.1_all.deb ... 228s Unpacking libjs-modernizr (3.13.0-0.1) ... 228s Selecting previously unselected package r-cran-pkgkitten. 228s Preparing to unpack .../173-r-cran-pkgkitten_0.2.4-1_all.deb ... 228s Unpacking r-cran-pkgkitten (0.2.4-1) ... 228s Selecting previously unselected package r-cran-rcpp. 228s Preparing to unpack .../174-r-cran-rcpp_1.0.14-1_amd64.deb ... 228s Unpacking r-cran-rcpp (1.0.14-1) ... 228s Selecting previously unselected package r-cran-later. 228s Preparing to unpack .../175-r-cran-later_1.4.1+dfsg-1_amd64.deb ... 228s Unpacking r-cran-later (1.4.1+dfsg-1) ... 228s Selecting previously unselected package r-cran-magrittr. 228s Preparing to unpack .../176-r-cran-magrittr_2.0.3-1_amd64.deb ... 228s Unpacking r-cran-magrittr (2.0.3-1) ... 228s Selecting previously unselected package r-cran-promises. 228s Preparing to unpack .../177-r-cran-promises_1.3.2+dfsg-1_amd64.deb ... 228s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 228s Selecting previously unselected package r-cran-httpuv. 228s Preparing to unpack .../178-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 228s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 228s Selecting previously unselected package r-cran-xtable. 228s Preparing to unpack .../179-r-cran-xtable_1%3a1.8-4-2_all.deb ... 228s Unpacking r-cran-xtable (1:1.8-4-2) ... 228s Selecting previously unselected package r-cran-sourcetools. 228s Preparing to unpack .../180-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 228s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 229s Selecting previously unselected package r-cran-crayon. 229s Preparing to unpack .../181-r-cran-crayon_1.5.3-1_all.deb ... 229s Unpacking r-cran-crayon (1.5.3-1) ... 229s Selecting previously unselected package r-cran-withr. 229s Preparing to unpack .../182-r-cran-withr_3.0.2+dfsg-1_all.deb ... 229s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 229s Selecting previously unselected package r-cran-commonmark. 229s Preparing to unpack .../183-r-cran-commonmark_1.9.2-2_amd64.deb ... 229s Unpacking r-cran-commonmark (1.9.2-2) ... 229s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 229s Preparing to unpack .../184-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 229s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 229s Selecting previously unselected package r-cran-shiny. 229s Preparing to unpack .../185-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 229s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 229s Selecting previously unselected package r-cran-rmarkdown. 229s Preparing to unpack .../186-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 229s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 229s Selecting previously unselected package r-cran-bookdown. 229s Preparing to unpack .../187-r-cran-bookdown_0.42+dfsg-1_all.deb ... 229s Unpacking r-cran-bookdown (0.42+dfsg-1) ... 229s Selecting previously unselected package r-cran-biocmanager. 229s Preparing to unpack .../188-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 229s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 229s Selecting previously unselected package tex-common. 229s Preparing to unpack .../189-tex-common_6.19_all.deb ... 229s Unpacking tex-common (6.19) ... 229s Selecting previously unselected package t1utils. 229s Preparing to unpack .../190-t1utils_1.41-4build3_amd64.deb ... 229s Unpacking t1utils (1.41-4build3) ... 229s Selecting previously unselected package texlive-binaries. 229s Preparing to unpack .../191-texlive-binaries_2024.20240313.70630+ds-6_amd64.deb ... 229s Unpacking texlive-binaries (2024.20240313.70630+ds-6) ... 229s Selecting previously unselected package texlive-base. 229s Preparing to unpack .../192-texlive-base_2024.20250114-1_all.deb ... 229s Unpacking texlive-base (2024.20250114-1) ... 230s Selecting previously unselected package texlive-latex-base. 230s Preparing to unpack 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up build-essential (12.10ubuntu1) ... 238s Setting up r-bioc-iranges (2.40.1-2) ... 238s Setting up r-cran-fontawesome (0.5.3-1) ... 238s Setting up r-bioc-dirichletmultinomial (1.48.0-2) ... 238s Setting up gfortran (4:14.2.0-1ubuntu1) ... 238s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 238s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 238s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 238s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 238s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 238s Setting up texlive-bibtex-extra (2024.20250114-1) ... 238s Setting up r-cran-memoise (2.0.1-1) ... 238s Setting up r-cran-promises (1.3.2+dfsg-1) ... 238s Setting up r-base-dev (4.4.3-1) ... 238s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 238s Setting up r-cran-bslib (0.8.0+dfsg-1) ... 238s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 238s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 238s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 238s Setting up r-cran-bookdown (0.42+dfsg-1) ... 238s Setting up r-cran-crosstalk (1.2.1+dfsg-1) ... 238s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 238s Setting up r-bioc-biocstyle (2.34.0+dfsg-1) ... 238s Setting up r-cran-dt (0.33+dfsg-1) ... 238s Processing triggers for man-db (2.13.0-1) ... 239s Processing triggers for install-info (7.1.1-1) ... 240s Processing triggers for libc-bin (2.41-1ubuntu2) ... 240s Processing triggers for tex-common (6.19) ... 240s Running updmap-sys. This may take some time... done. 240s Running mktexlsr /var/lib/texmf ... done. 240s Building format(s) --all. 268s This may take some time... done. 269s autopkgtest [22:02:38]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 269s autopkgtest [22:02:38]: test pkg-r-autopkgtest: [----------------------- 269s Test: Try to load the R library DirichletMultinomial 269s 269s R version 4.4.3 (2025-02-28) -- "Trophy Case" 269s Copyright (C) 2025 The R Foundation for Statistical Computing 269s Platform: x86_64-pc-linux-gnu 269s 269s R is free software and comes with ABSOLUTELY NO WARRANTY. 269s You are welcome to redistribute it under certain conditions. 269s Type 'license()' or 'licence()' for distribution details. 269s 269s R is a collaborative project with many contributors. 269s Type 'contributors()' for more information and 269s 'citation()' on how to cite R or R packages in publications. 269s 269s Type 'demo()' for some demos, 'help()' for on-line help, or 269s 'help.start()' for an HTML browser interface to help. 269s Type 'q()' to quit R. 269s 269s > library('DirichletMultinomial') 269s Loading required package: S4Vectors 269s Loading required package: stats4 270s Loading required package: BiocGenerics 270s 270s Attaching package: ‘BiocGenerics’ 270s 270s The following objects are masked from ‘package:stats’: 270s 270s IQR, mad, sd, var, xtabs 270s 270s The following objects are masked from ‘package:base’: 270s 270s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 270s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 270s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 270s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 270s Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff, 270s table, tapply, union, unique, unsplit, which.max, which.min 270s 270s 270s Attaching package: ‘S4Vectors’ 270s 270s The following object is masked from ‘package:utils’: 270s 270s findMatches 270s 270s The following objects are masked from ‘package:base’: 270s 270s expand.grid, I, unname 270s 270s Loading required package: IRanges 271s > 271s > 271s Other tests are currently unsupported! 271s They will be progressively added. 271s autopkgtest [22:02:40]: test pkg-r-autopkgtest: -----------------------] 272s pkg-r-autopkgtest PASS 272s autopkgtest [22:02:41]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 272s autopkgtest [22:02:41]: @@@@@@@@@@@@@@@@@@@@ summary 272s pkg-r-autopkgtest PASS 277s nova [W] Skipping flock for amd64 277s Creating nova instance adt-plucky-amd64-r-bioc-dirichletmultinomial-20250315-215808-juju-7f2275-prod-proposed-migration-environment-2-9094f0ec-cfba-4608-962a-2555c56237b3 from image adt/ubuntu-plucky-amd64-server-20250304.img (UUID 9c7d4da5-d95f-4c85-ac1f-51eb37e75c4c)... 277s nova [W] Timed out waiting for aadf5298-1604-4ec4-9787-a2fc3cbe1832 to get deleted.