0s autopkgtest [21:57:43]: starting date and time: 2025-03-15 21:57:43+0000 0s autopkgtest [21:57:43]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [21:57:43]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.cf5u8zje/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-bioc-degnorm --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-31.secgroup --name adt-plucky-amd64-r-bioc-degnorm-20250315-215743-juju-7f2275-prod-proposed-migration-environment-2-c7776c3b-5917-481d-a98d-6bf166d3fbb0 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 47s autopkgtest [21:58:30]: testbed dpkg architecture: amd64 47s autopkgtest [21:58:30]: testbed apt version: 2.9.31ubuntu1 47s autopkgtest [21:58:30]: @@@@@@@@@@@@@@@@@@@@ test bed setup 47s autopkgtest [21:58:30]: testbed release detected to be: None 48s autopkgtest [21:58:31]: updating testbed package index (apt update) 49s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 49s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 49s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 49s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 49s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [14.5 kB] 49s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [44.1 kB] 49s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [369 kB] 49s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [85.7 kB] 49s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [67.4 kB] 49s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 c-n-f Metadata [1852 B] 49s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 c-n-f Metadata [116 B] 49s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [342 kB] 49s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [174 kB] 49s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 c-n-f Metadata [15.3 kB] 49s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [16.1 kB] 49s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [8544 B] 49s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 c-n-f Metadata [628 B] 50s Fetched 1265 kB in 1s (1442 kB/s) 51s Reading package lists... 52s Reading package lists... 52s Building dependency tree... 52s Reading state information... 52s Calculating upgrade... 52s Calculating upgrade... 53s The following package was automatically installed and is no longer required: 53s libnl-genl-3-200 53s Use 'sudo apt autoremove' to remove it. 53s The following NEW packages will be installed: 53s bpftool libdebuginfod-common libdebuginfod1t64 linux-headers-6.14.0-10 53s linux-headers-6.14.0-10-generic linux-image-6.14.0-10-generic 53s linux-modules-6.14.0-10-generic linux-modules-extra-6.14.0-10-generic 53s linux-perf linux-tools-6.14.0-10 linux-tools-6.14.0-10-generic pnp.ids 53s The following packages will be upgraded: 53s apparmor apt apt-utils binutils binutils-common binutils-x86-64-linux-gnu 53s cloud-init cloud-init-base curl dosfstools exfatprogs fwupd gcc-15-base 53s gir1.2-girepository-2.0 gir1.2-glib-2.0 htop hwdata initramfs-tools 53s initramfs-tools-bin initramfs-tools-core libapparmor1 libapt-pkg7.0 53s libassuan9 libatomic1 libaudit-common libaudit1 libbinutils libbrotli1 53s libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libctf-nobfd0 libctf0 53s libcurl3t64-gnutls libcurl4t64 libestr0 libftdi1-2 libfwupd3 libgcc-s1 53s libgirepository-1.0-1 libglib2.0-0t64 libglib2.0-data libgpgme11t64 53s libgprofng0 libjemalloc2 liblz4-1 liblzma5 libmm-glib0 libncurses6 53s libncursesw6 libnewt0.52 libnl-3-200 libnl-genl-3-200 libnl-route-3-200 53s libnss-systemd libpam-systemd libparted2t64 libpci3 libpython3-stdlib 53s libpython3.13 libpython3.13-minimal libpython3.13-stdlib libseccomp2 53s libselinux1 libsemanage-common libsemanage2 libsframe1 libsqlite3-0 53s libstdc++6 libsystemd-shared libsystemd0 libtinfo6 libudev1 libxml2 53s linux-firmware linux-generic linux-headers-generic linux-headers-virtual 53s linux-image-generic linux-image-virtual linux-libc-dev linux-tools-common 53s linux-virtual locales media-types ncurses-base ncurses-bin ncurses-term 53s parted pci.ids pciutils pinentry-curses python-apt-common python3 53s python3-apt python3-bcrypt python3-cffi-backend python3-dbus python3-gi 53s python3-jinja2 python3-lazr.uri python3-markupsafe python3-minimal 53s python3-newt python3-rpds-py python3-systemd python3-yaml python3.13 53s python3.13-gdbm python3.13-minimal rsync rsyslog strace systemd 53s systemd-cryptsetup systemd-resolved systemd-sysv systemd-timesyncd 53s ubuntu-kernel-accessories ubuntu-minimal ubuntu-standard udev whiptail 53s xz-utils 53s 126 upgraded, 12 newly installed, 0 to remove and 0 not upgraded. 53s Need to get 829 MB of archives. 53s After this operation, 325 MB of additional disk space will be used. 53s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-bin amd64 6.5+20250216-2 [194 kB] 53s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-dev-bin amd64 2.41-1ubuntu1 [24.7 kB] 53s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6-dev amd64 2.41-1ubuntu1 [2182 kB] 53s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 locales all 2.41-1ubuntu1 [4246 kB] 53s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6 amd64 2.41-1ubuntu1 [3327 kB] 53s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-bin amd64 2.41-1ubuntu1 [701 kB] 54s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-libc-dev amd64 6.14.0-10.10 [1723 kB] 54s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libatomic1 amd64 15-20250222-0ubuntu1 [10.4 kB] 54s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-15-base amd64 15-20250222-0ubuntu1 [53.4 kB] 54s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-s1 amd64 15-20250222-0ubuntu1 [77.8 kB] 54s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++6 amd64 15-20250222-0ubuntu1 [798 kB] 54s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-base all 6.5+20250216-2 [25.9 kB] 54s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-term all 6.5+20250216-2 [276 kB] 54s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 liblz4-1 amd64 1.10.0-4 [66.4 kB] 54s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma5 amd64 5.6.4-1 [157 kB] 54s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd0 amd64 257.3-1ubuntu3 [595 kB] 54s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libnss-systemd amd64 257.3-1ubuntu3 [199 kB] 54s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-sysv amd64 257.3-1ubuntu3 [11.9 kB] 54s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-resolved amd64 257.3-1ubuntu3 [345 kB] 54s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-systemd amd64 257.3-1ubuntu3 [302 kB] 54s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd-shared amd64 257.3-1ubuntu3 [2371 kB] 54s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd amd64 257.3-1ubuntu3 [3052 kB] 54s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-timesyncd amd64 257.3-1ubuntu3 [42.1 kB] 54s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-cryptsetup amd64 257.3-1ubuntu3 [124 kB] 54s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 udev amd64 257.3-1ubuntu3 [1404 kB] 54s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libudev1 amd64 257.3-1ubuntu3 [215 kB] 54s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit-common all 1:4.0.2-2ubuntu2 [6628 B] 54s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libcap-ng0 amd64 0.8.5-4build1 [15.6 kB] 54s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit1 amd64 1:4.0.2-2ubuntu2 [54.0 kB] 54s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libseccomp2 amd64 2.5.5-1ubuntu6 [53.5 kB] 54s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libselinux1 amd64 3.7-3ubuntu3 [87.3 kB] 54s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libapparmor1 amd64 4.1.0~beta5-0ubuntu8 [55.0 kB] 54s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libapt-pkg7.0 amd64 2.9.33 [1138 kB] 54s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 apt amd64 2.9.33 [1439 kB] 54s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 apt-utils amd64 2.9.33 [222 kB] 54s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-minimal amd64 3.13.2-2 [27.7 kB] 54s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 python3 amd64 3.13.2-2 [24.0 kB] 54s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13 amd64 3.13.2-2 [2341 kB] 54s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 media-types all 13.0.0 [29.9 kB] 54s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses6 amd64 6.5+20250216-2 [126 kB] 54s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libncursesw6 amd64 6.5+20250216-2 [165 kB] 54s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libtinfo6 amd64 6.5+20250216-2 [119 kB] 54s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libsqlite3-0 amd64 3.46.1-2 [715 kB] 54s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.2-2 [735 kB] 54s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.2-2 [2365 kB] 54s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.2-2 [883 kB] 54s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.2-2 [2066 kB] 54s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.4 kB] 54s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 rsync amd64 3.4.1+ds1-3 [482 kB] 54s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod-common all 0.192-4 [15.4 kB] 54s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage-common all 3.7-2.1build1 [7268 B] 54s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage2 amd64 3.7-2.1build1 [106 kB] 54s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libassuan9 amd64 3.0.2-2 [43.1 kB] 54s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-girepository-2.0 amd64 1.83.4-1 [25.3 kB] 54s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-glib-2.0 amd64 2.84.0-1 [184 kB] 54s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-0t64 amd64 2.84.0-1 [1669 kB] 55s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libgirepository-1.0-1 amd64 1.83.4-1 [89.5 kB] 55s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libestr0 amd64 0.1.11-2 [8340 B] 55s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-data all 2.84.0-1 [53.0 kB] 55s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-newt amd64 0.52.24-4ubuntu2 [21.1 kB] 55s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libnewt0.52 amd64 0.52.24-4ubuntu2 [55.7 kB] 55s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2ubuntu5 [772 kB] 55s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 python-apt-common all 2.9.9build1 [21.3 kB] 55s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-apt amd64 2.9.9build1 [172 kB] 55s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-cffi-backend amd64 1.17.1-2build2 [96.6 kB] 55s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dbus amd64 1.3.2-5build5 [102 kB] 55s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-4build1 [252 kB] 55s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-yaml amd64 6.0.2-1build2 [144 kB] 55s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 rsyslog amd64 8.2412.0-2ubuntu2 [555 kB] 55s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 whiptail amd64 0.52.24-4ubuntu2 [19.1 kB] 55s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-minimal amd64 1.549 [11.5 kB] 55s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 apparmor amd64 4.1.0~beta5-0ubuntu8 [701 kB] 55s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 dosfstools amd64 4.2-1.2 [95.0 kB] 55s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-genl-3-200 amd64 3.7.0-1 [12.2 kB] 55s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-route-3-200 amd64 3.7.0-1 [191 kB] 55s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-3-200 amd64 3.7.0-1 [64.9 kB] 55s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 parted amd64 3.6-5 [53.9 kB] 55s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libparted2t64 amd64 3.6-5 [158 kB] 55s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 pci.ids all 0.0~2025.03.09-1 [285 kB] 55s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 pciutils amd64 1:3.13.0-2 [110 kB] 55s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 libpci3 amd64 1:3.13.0-2 [39.8 kB] 55s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 strace amd64 6.13+ds-1ubuntu1 [622 kB] 55s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 xz-utils amd64 5.6.4-1 [278 kB] 55s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-standard amd64 1.549 [11.5 kB] 55s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libgprofng0 amd64 2.44-3ubuntu1 [886 kB] 55s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf0 amd64 2.44-3ubuntu1 [96.5 kB] 55s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf-nobfd0 amd64 2.44-3ubuntu1 [98.9 kB] 55s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-x86-64-linux-gnu amd64 2.44-3ubuntu1 [1108 kB] 55s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libbinutils amd64 2.44-3ubuntu1 [585 kB] 55s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils amd64 2.44-3ubuntu1 [208 kB] 55s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-common amd64 2.44-3ubuntu1 [215 kB] 55s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libsframe1 amd64 2.44-3ubuntu1 [14.8 kB] 55s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 hwdata all 0.393-3 [1562 B] 55s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 pnp.ids all 0.393-3 [29.5 kB] 55s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-common all 6.14.0-10.10 [295 kB] 55s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 bpftool amd64 7.6.0+6.14.0-10.10 [1147 kB] 55s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-markupsafe amd64 2.1.5-1build4 [13.4 kB] 55s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 55s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init-base all 25.1-0ubuntu3 [616 kB] 55s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libbrotli1 amd64 1.1.0-2build4 [365 kB] 55s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 curl amd64 8.12.1-3ubuntu1 [258 kB] 55s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4t64 amd64 8.12.1-3ubuntu1 [437 kB] 56s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 exfatprogs amd64 1.2.8-1 [76.3 kB] 56s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl3t64-gnutls amd64 8.12.1-3ubuntu1 [432 kB] 56s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 fwupd amd64 2.0.6-4 [5408 kB] 56s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libfwupd3 amd64 2.0.6-4 [136 kB] 56s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libmm-glib0 amd64 1.23.4-0ubuntu3 [251 kB] 56s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 htop amd64 3.4.0-2 [195 kB] 56s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-firmware amd64 20250310.git9e1370d3-0ubuntu1 [571 MB] 83s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools all 0.146ubuntu1 [7920 B] 83s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-core all 0.146ubuntu1 [51.9 kB] 83s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-bin amd64 0.146ubuntu1 [26.2 kB] 83s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod1t64 amd64 0.192-4 [21.0 kB] 83s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 libftdi1-2 amd64 1.5-8build1 [30.2 kB] 83s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libgpgme11t64 amd64 1.24.2-1ubuntu2 [155 kB] 83s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libjemalloc2 amd64 5.3.0-3 [277 kB] 83s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-6.14.0-10-generic amd64 6.14.0-10.10 [41.2 MB] 84s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-6.14.0-10-generic amd64 6.14.0-10.10 [15.3 MB] 85s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-extra-6.14.0-10-generic amd64 6.14.0-10.10 [120 MB] 90s Get:120 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-generic amd64 6.14.0-10.10 [1730 B] 90s Get:121 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-generic amd64 6.14.0-10.10 [11.1 kB] 90s Get:122 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-virtual amd64 6.14.0-10.10 [1722 B] 90s Get:123 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-virtual amd64 6.14.0-10.10 [11.1 kB] 90s Get:124 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-virtual amd64 6.14.0-10.10 [1642 B] 90s Get:125 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10 all 6.14.0-10.10 [14.2 MB] 90s Get:126 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10-generic amd64 6.14.0-10.10 [3915 kB] 90s Get:127 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-generic amd64 6.14.0-10.10 [11.0 kB] 90s Get:128 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-perf amd64 6.14.0-10.10 [4122 kB] 91s Get:129 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10 amd64 6.14.0-10.10 [1394 kB] 91s Get:130 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10-generic amd64 6.14.0-10.10 [830 B] 91s Get:131 http://ftpmaster.internal/ubuntu plucky/main amd64 pinentry-curses amd64 1.3.1-2ubuntu3 [42.3 kB] 91s Get:132 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lazr.uri all 1.0.6-6 [13.7 kB] 91s Get:133 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-rpds-py amd64 0.21.0-2ubuntu2 [278 kB] 91s Get:134 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-systemd amd64 235-1build6 [43.9 kB] 91s Get:135 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-gdbm amd64 3.13.2-2 [31.9 kB] 91s Get:136 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-kernel-accessories amd64 1.549 [11.2 kB] 91s Get:137 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init all 25.1-0ubuntu3 [2100 B] 91s Get:138 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-bcrypt amd64 4.2.0-2.1build1 [221 kB] 91s Preconfiguring packages ... 91s Fetched 829 MB in 38s (21.8 MB/s) 92s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109140 files and directories currently installed.) 92s Preparing to unpack .../ncurses-bin_6.5+20250216-2_amd64.deb ... 92s Unpacking ncurses-bin (6.5+20250216-2) over (6.5+20250216-1) ... 92s Setting up ncurses-bin (6.5+20250216-2) ... 92s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109140 files and directories currently installed.) 92s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu1_amd64.deb ... 92s Unpacking libc-dev-bin (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 92s Preparing to unpack .../libc6-dev_2.41-1ubuntu1_amd64.deb ... 92s Unpacking libc6-dev:amd64 (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 92s Preparing to unpack .../locales_2.41-1ubuntu1_all.deb ... 92s Unpacking locales (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 92s Preparing to unpack .../libc6_2.41-1ubuntu1_amd64.deb ... 92s Checking for services that may need to be restarted... 92s Checking init scripts... 92s Checking for services that may need to be restarted... 92s Checking init scripts... 92s Stopping some services possibly affected by the upgrade (will be restarted later): 92s cron: stopping...done. 92s 93s Unpacking libc6:amd64 (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 93s Setting up libc6:amd64 (2.41-1ubuntu1) ... 93s Checking for services that may need to be restarted... 93s Checking init scripts... 93s Restarting services possibly affected by the upgrade: 93s cron: restarting...done. 93s 93s Services restarted successfully. 93s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109141 files and directories currently installed.) 93s Preparing to unpack .../libc-bin_2.41-1ubuntu1_amd64.deb ... 93s Unpacking libc-bin (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 93s Setting up libc-bin (2.41-1ubuntu1) ... 93s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109141 files and directories currently installed.) 93s Preparing to unpack .../linux-libc-dev_6.14.0-10.10_amd64.deb ... 93s Unpacking linux-libc-dev:amd64 (6.14.0-10.10) over (6.12.0-16.16) ... 93s Preparing to unpack .../libatomic1_15-20250222-0ubuntu1_amd64.deb ... 93s Unpacking libatomic1:amd64 (15-20250222-0ubuntu1) over (15-20250213-1ubuntu1) ... 94s Preparing to unpack .../gcc-15-base_15-20250222-0ubuntu1_amd64.deb ... 94s Unpacking gcc-15-base:amd64 (15-20250222-0ubuntu1) over (15-20250213-1ubuntu1) ... 94s Setting up gcc-15-base:amd64 (15-20250222-0ubuntu1) ... 94s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 94s Preparing to unpack .../libgcc-s1_15-20250222-0ubuntu1_amd64.deb ... 94s Unpacking libgcc-s1:amd64 (15-20250222-0ubuntu1) over (15-20250213-1ubuntu1) ... 94s Setting up libgcc-s1:amd64 (15-20250222-0ubuntu1) ... 94s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 94s Preparing to unpack .../libstdc++6_15-20250222-0ubuntu1_amd64.deb ... 94s Unpacking libstdc++6:amd64 (15-20250222-0ubuntu1) over (15-20250213-1ubuntu1) ... 94s Setting up libstdc++6:amd64 (15-20250222-0ubuntu1) ... 94s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 94s Preparing to unpack .../ncurses-base_6.5+20250216-2_all.deb ... 94s Unpacking ncurses-base (6.5+20250216-2) over (6.5+20250216-1) ... 94s Setting up ncurses-base (6.5+20250216-2) ... 94s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 94s Preparing to unpack .../ncurses-term_6.5+20250216-2_all.deb ... 94s Unpacking ncurses-term (6.5+20250216-2) over (6.5+20250216-1) ... 95s Preparing to unpack .../liblz4-1_1.10.0-4_amd64.deb ... 95s Unpacking liblz4-1:amd64 (1.10.0-4) over (1.10.0-3) ... 95s Setting up liblz4-1:amd64 (1.10.0-4) ... 95s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 95s Preparing to unpack .../liblzma5_5.6.4-1_amd64.deb ... 95s Unpacking liblzma5:amd64 (5.6.4-1) over (5.6.3-1) ... 95s Setting up liblzma5:amd64 (5.6.4-1) ... 95s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 95s Preparing to unpack .../libsystemd0_257.3-1ubuntu3_amd64.deb ... 95s Unpacking libsystemd0:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 95s Setting up libsystemd0:amd64 (257.3-1ubuntu3) ... 95s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 95s Preparing to unpack .../libnss-systemd_257.3-1ubuntu3_amd64.deb ... 95s Unpacking libnss-systemd:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 95s Preparing to unpack .../systemd-sysv_257.3-1ubuntu3_amd64.deb ... 95s Unpacking systemd-sysv (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 95s Preparing to unpack .../systemd-resolved_257.3-1ubuntu3_amd64.deb ... 95s Unpacking systemd-resolved (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 95s Preparing to unpack .../libpam-systemd_257.3-1ubuntu3_amd64.deb ... 95s Unpacking libpam-systemd:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 95s Preparing to unpack .../libsystemd-shared_257.3-1ubuntu3_amd64.deb ... 95s Unpacking libsystemd-shared:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 95s Setting up libsystemd-shared:amd64 (257.3-1ubuntu3) ... 95s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 95s Preparing to unpack .../systemd_257.3-1ubuntu3_amd64.deb ... 95s Unpacking systemd (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 96s Preparing to unpack .../systemd-timesyncd_257.3-1ubuntu3_amd64.deb ... 96s Unpacking systemd-timesyncd (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 96s Preparing to unpack .../systemd-cryptsetup_257.3-1ubuntu3_amd64.deb ... 96s Unpacking systemd-cryptsetup (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 96s Preparing to unpack .../udev_257.3-1ubuntu3_amd64.deb ... 96s Unpacking udev (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 96s Preparing to unpack .../libudev1_257.3-1ubuntu3_amd64.deb ... 96s Unpacking libudev1:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 96s Setting up libudev1:amd64 (257.3-1ubuntu3) ... 96s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 96s Preparing to unpack .../libaudit-common_1%3a4.0.2-2ubuntu2_all.deb ... 96s Unpacking libaudit-common (1:4.0.2-2ubuntu2) over (1:4.0.2-2ubuntu1) ... 96s Setting up libaudit-common (1:4.0.2-2ubuntu2) ... 96s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 96s Preparing to unpack .../libcap-ng0_0.8.5-4build1_amd64.deb ... 96s Unpacking libcap-ng0:amd64 (0.8.5-4build1) over (0.8.5-4) ... 96s Setting up libcap-ng0:amd64 (0.8.5-4build1) ... 96s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 96s Preparing to unpack .../libaudit1_1%3a4.0.2-2ubuntu2_amd64.deb ... 96s Unpacking libaudit1:amd64 (1:4.0.2-2ubuntu2) over (1:4.0.2-2ubuntu1) ... 96s Setting up libaudit1:amd64 (1:4.0.2-2ubuntu2) ... 96s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 96s Preparing to unpack .../libseccomp2_2.5.5-1ubuntu6_amd64.deb ... 96s Unpacking libseccomp2:amd64 (2.5.5-1ubuntu6) over (2.5.5-1ubuntu5) ... 96s Setting up libseccomp2:amd64 (2.5.5-1ubuntu6) ... 96s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 96s Preparing to unpack .../libselinux1_3.7-3ubuntu3_amd64.deb ... 96s Unpacking libselinux1:amd64 (3.7-3ubuntu3) over (3.7-3ubuntu2) ... 96s Setting up libselinux1:amd64 (3.7-3ubuntu3) ... 96s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 96s Preparing to unpack .../libapparmor1_4.1.0~beta5-0ubuntu8_amd64.deb ... 96s Unpacking libapparmor1:amd64 (4.1.0~beta5-0ubuntu8) over (4.1.0~beta5-0ubuntu5) ... 97s Preparing to unpack .../libapt-pkg7.0_2.9.33_amd64.deb ... 97s Unpacking libapt-pkg7.0:amd64 (2.9.33) over (2.9.31ubuntu1) ... 97s Setting up libapt-pkg7.0:amd64 (2.9.33) ... 97s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 97s Preparing to unpack .../archives/apt_2.9.33_amd64.deb ... 97s Unpacking apt (2.9.33) over (2.9.31ubuntu1) ... 97s Setting up apt (2.9.33) ... 98s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 98s Preparing to unpack .../apt-utils_2.9.33_amd64.deb ... 98s Unpacking apt-utils (2.9.33) over (2.9.31ubuntu1) ... 98s Preparing to unpack .../python3-minimal_3.13.2-2_amd64.deb ... 98s Unpacking python3-minimal (3.13.2-2) over (3.13.2-1) ... 98s Setting up python3-minimal (3.13.2-2) ... 98s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 98s Preparing to unpack .../0-python3_3.13.2-2_amd64.deb ... 98s Unpacking python3 (3.13.2-2) over (3.13.2-1) ... 98s Preparing to unpack .../1-libpython3.13_3.13.2-2_amd64.deb ... 98s Unpacking libpython3.13:amd64 (3.13.2-2) over (3.13.2-1) ... 98s Preparing to unpack .../2-media-types_13.0.0_all.deb ... 98s Unpacking media-types (13.0.0) over (12.0.0) ... 98s Preparing to unpack .../3-libncurses6_6.5+20250216-2_amd64.deb ... 98s Unpacking libncurses6:amd64 (6.5+20250216-2) over (6.5+20250216-1) ... 98s Preparing to unpack .../4-libncursesw6_6.5+20250216-2_amd64.deb ... 98s Unpacking libncursesw6:amd64 (6.5+20250216-2) over (6.5+20250216-1) ... 98s Preparing to unpack .../5-libtinfo6_6.5+20250216-2_amd64.deb ... 98s Unpacking libtinfo6:amd64 (6.5+20250216-2) over (6.5+20250216-1) ... 98s Setting up libtinfo6:amd64 (6.5+20250216-2) ... 98s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 98s Preparing to unpack .../0-libsqlite3-0_3.46.1-2_amd64.deb ... 98s Unpacking libsqlite3-0:amd64 (3.46.1-2) over (3.46.1-1) ... 98s Preparing to unpack .../1-python3.13_3.13.2-2_amd64.deb ... 98s Unpacking python3.13 (3.13.2-2) over (3.13.2-1) ... 98s Preparing to unpack .../2-python3.13-minimal_3.13.2-2_amd64.deb ... 98s Unpacking python3.13-minimal (3.13.2-2) over (3.13.2-1) ... 99s Preparing to unpack .../3-libpython3.13-minimal_3.13.2-2_amd64.deb ... 99s Unpacking libpython3.13-minimal:amd64 (3.13.2-2) over (3.13.2-1) ... 99s Preparing to unpack .../4-libpython3.13-stdlib_3.13.2-2_amd64.deb ... 99s Unpacking libpython3.13-stdlib:amd64 (3.13.2-2) over (3.13.2-1) ... 99s Preparing to unpack .../5-libpython3-stdlib_3.13.2-2_amd64.deb ... 99s Unpacking libpython3-stdlib:amd64 (3.13.2-2) over (3.13.2-1) ... 99s Preparing to unpack .../6-rsync_3.4.1+ds1-3_amd64.deb ... 99s Unpacking rsync (3.4.1+ds1-3) over (3.4.1-0syncable1) ... 99s Selecting previously unselected package libdebuginfod-common. 99s Preparing to unpack .../7-libdebuginfod-common_0.192-4_all.deb ... 99s Unpacking libdebuginfod-common (0.192-4) ... 99s Preparing to unpack .../8-libsemanage-common_3.7-2.1build1_all.deb ... 99s Unpacking libsemanage-common (3.7-2.1build1) over (3.7-2.1) ... 99s Setting up libsemanage-common (3.7-2.1build1) ... 99s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109155 files and directories currently installed.) 99s Preparing to unpack .../libsemanage2_3.7-2.1build1_amd64.deb ... 99s Unpacking libsemanage2:amd64 (3.7-2.1build1) over (3.7-2.1) ... 99s Setting up libsemanage2:amd64 (3.7-2.1build1) ... 99s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109155 files and directories currently installed.) 99s Preparing to unpack .../libassuan9_3.0.2-2_amd64.deb ... 99s Unpacking libassuan9:amd64 (3.0.2-2) over (3.0.1-2) ... 99s Setting up libassuan9:amd64 (3.0.2-2) ... 99s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109155 files and directories currently installed.) 99s Preparing to unpack .../00-gir1.2-girepository-2.0_1.83.4-1_amd64.deb ... 99s Unpacking gir1.2-girepository-2.0:amd64 (1.83.4-1) over (1.82.0-4) ... 99s Preparing to unpack .../01-gir1.2-glib-2.0_2.84.0-1_amd64.deb ... 99s Unpacking gir1.2-glib-2.0:amd64 (2.84.0-1) over (2.83.5-1) ... 99s Preparing to unpack .../02-libglib2.0-0t64_2.84.0-1_amd64.deb ... 99s Unpacking libglib2.0-0t64:amd64 (2.84.0-1) over (2.83.5-1) ... 99s Preparing to unpack .../03-libgirepository-1.0-1_1.83.4-1_amd64.deb ... 99s Unpacking libgirepository-1.0-1:amd64 (1.83.4-1) over (1.82.0-4) ... 99s Preparing to unpack .../04-libestr0_0.1.11-2_amd64.deb ... 99s Unpacking libestr0:amd64 (0.1.11-2) over (0.1.11-1build1) ... 99s Preparing to unpack .../05-libglib2.0-data_2.84.0-1_all.deb ... 99s Unpacking libglib2.0-data (2.84.0-1) over (2.83.5-1) ... 100s Preparing to unpack .../06-python3-newt_0.52.24-4ubuntu2_amd64.deb ... 100s Unpacking python3-newt:amd64 (0.52.24-4ubuntu2) over (0.52.24-4ubuntu1) ... 100s Preparing to unpack .../07-libnewt0.52_0.52.24-4ubuntu2_amd64.deb ... 100s Unpacking libnewt0.52:amd64 (0.52.24-4ubuntu2) over (0.52.24-4ubuntu1) ... 100s Preparing to unpack .../08-libxml2_2.12.7+dfsg+really2.9.14-0.2ubuntu5_amd64.deb ... 100s Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2ubuntu5) over (2.12.7+dfsg+really2.9.14-0.2ubuntu4) ... 100s Preparing to unpack .../09-python-apt-common_2.9.9build1_all.deb ... 100s Unpacking python-apt-common (2.9.9build1) over (2.9.9) ... 100s Preparing to unpack .../10-python3-apt_2.9.9build1_amd64.deb ... 100s Unpacking python3-apt (2.9.9build1) over (2.9.9) ... 100s Preparing to unpack .../11-python3-cffi-backend_1.17.1-2build2_amd64.deb ... 100s Unpacking python3-cffi-backend:amd64 (1.17.1-2build2) over (1.17.1-2build1) ... 100s Preparing to unpack .../12-python3-dbus_1.3.2-5build5_amd64.deb ... 100s Unpacking python3-dbus (1.3.2-5build5) over (1.3.2-5build4) ... 100s Preparing to unpack .../13-python3-gi_3.50.0-4build1_amd64.deb ... 100s Unpacking python3-gi (3.50.0-4build1) over (3.50.0-4) ... 100s Preparing to unpack .../14-python3-yaml_6.0.2-1build2_amd64.deb ... 100s Unpacking python3-yaml (6.0.2-1build2) over (6.0.2-1build1) ... 100s Preparing to unpack .../15-rsyslog_8.2412.0-2ubuntu2_amd64.deb ... 101s Unpacking rsyslog (8.2412.0-2ubuntu2) over (8.2412.0-2ubuntu1) ... 101s Preparing to unpack .../16-whiptail_0.52.24-4ubuntu2_amd64.deb ... 101s Unpacking whiptail (0.52.24-4ubuntu2) over (0.52.24-4ubuntu1) ... 101s Preparing to unpack .../17-ubuntu-minimal_1.549_amd64.deb ... 101s Unpacking ubuntu-minimal (1.549) over (1.548) ... 101s Preparing to unpack .../18-apparmor_4.1.0~beta5-0ubuntu8_amd64.deb ... 101s Unpacking apparmor (4.1.0~beta5-0ubuntu8) over (4.1.0~beta5-0ubuntu5) ... 102s Preparing to unpack .../19-dosfstools_4.2-1.2_amd64.deb ... 102s Unpacking dosfstools (4.2-1.2) over (4.2-1.1build1) ... 102s Preparing to unpack .../20-libnl-genl-3-200_3.7.0-1_amd64.deb ... 102s Unpacking libnl-genl-3-200:amd64 (3.7.0-1) over (3.7.0-0.3build2) ... 102s Preparing to unpack .../21-libnl-route-3-200_3.7.0-1_amd64.deb ... 102s Unpacking libnl-route-3-200:amd64 (3.7.0-1) over (3.7.0-0.3build2) ... 102s Preparing to unpack .../22-libnl-3-200_3.7.0-1_amd64.deb ... 102s Unpacking libnl-3-200:amd64 (3.7.0-1) over (3.7.0-0.3build2) ... 102s Preparing to unpack .../23-parted_3.6-5_amd64.deb ... 102s Unpacking parted (3.6-5) over (3.6-4build1) ... 102s Preparing to unpack .../24-libparted2t64_3.6-5_amd64.deb ... 102s Adding 'diversion of /lib/x86_64-linux-gnu/libparted.so.2 to /lib/x86_64-linux-gnu/libparted.so.2.usr-is-merged by libparted2t64' 102s Adding 'diversion of /lib/x86_64-linux-gnu/libparted.so.2.0.5 to /lib/x86_64-linux-gnu/libparted.so.2.0.5.usr-is-merged by libparted2t64' 102s Unpacking libparted2t64:amd64 (3.6-5) over (3.6-4build1) ... 102s Preparing to unpack .../25-pci.ids_0.0~2025.03.09-1_all.deb ... 102s Unpacking pci.ids (0.0~2025.03.09-1) over (0.0~2025.02.12-1) ... 102s Preparing to unpack .../26-pciutils_1%3a3.13.0-2_amd64.deb ... 102s Unpacking pciutils (1:3.13.0-2) over (1:3.13.0-1) ... 102s Preparing to unpack .../27-libpci3_1%3a3.13.0-2_amd64.deb ... 102s Unpacking libpci3:amd64 (1:3.13.0-2) over (1:3.13.0-1) ... 102s Preparing to unpack .../28-strace_6.13+ds-1ubuntu1_amd64.deb ... 102s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 102s Preparing to unpack .../29-xz-utils_5.6.4-1_amd64.deb ... 102s Unpacking xz-utils (5.6.4-1) over (5.6.3-1) ... 102s Preparing to unpack .../30-ubuntu-standard_1.549_amd64.deb ... 102s Unpacking ubuntu-standard (1.549) over (1.548) ... 102s Preparing to unpack .../31-libgprofng0_2.44-3ubuntu1_amd64.deb ... 102s Unpacking libgprofng0:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 102s Preparing to unpack .../32-libctf0_2.44-3ubuntu1_amd64.deb ... 102s Unpacking libctf0:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 102s Preparing to unpack .../33-libctf-nobfd0_2.44-3ubuntu1_amd64.deb ... 102s Unpacking libctf-nobfd0:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 103s Preparing to unpack .../34-binutils-x86-64-linux-gnu_2.44-3ubuntu1_amd64.deb ... 103s Unpacking binutils-x86-64-linux-gnu (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 103s Preparing to unpack .../35-libbinutils_2.44-3ubuntu1_amd64.deb ... 103s Unpacking libbinutils:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 103s Preparing to unpack .../36-binutils_2.44-3ubuntu1_amd64.deb ... 103s Unpacking binutils (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 103s Preparing to unpack .../37-binutils-common_2.44-3ubuntu1_amd64.deb ... 103s Unpacking binutils-common:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 103s Preparing to unpack .../38-libsframe1_2.44-3ubuntu1_amd64.deb ... 103s Unpacking libsframe1:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 103s Preparing to unpack .../39-hwdata_0.393-3_all.deb ... 103s Unpacking hwdata (0.393-3) over (0.392-1) ... 103s Selecting previously unselected package pnp.ids. 103s Preparing to unpack .../40-pnp.ids_0.393-3_all.deb ... 103s Unpacking pnp.ids (0.393-3) ... 103s Preparing to unpack .../41-linux-tools-common_6.14.0-10.10_all.deb ... 103s Unpacking linux-tools-common (6.14.0-10.10) over (6.12.0-16.16) ... 103s Selecting previously unselected package bpftool. 103s Preparing to unpack .../42-bpftool_7.6.0+6.14.0-10.10_amd64.deb ... 103s Unpacking bpftool (7.6.0+6.14.0-10.10) ... 103s Preparing to unpack .../43-python3-markupsafe_2.1.5-1build4_amd64.deb ... 103s Unpacking python3-markupsafe (2.1.5-1build4) over (2.1.5-1build3) ... 103s Preparing to unpack .../44-python3-jinja2_3.1.5-2ubuntu1_all.deb ... 103s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 103s Preparing to unpack .../45-cloud-init-base_25.1-0ubuntu3_all.deb ... 104s Unpacking cloud-init-base (25.1-0ubuntu3) over (25.1-0ubuntu2) ... 104s Preparing to unpack .../46-libbrotli1_1.1.0-2build4_amd64.deb ... 104s Unpacking libbrotli1:amd64 (1.1.0-2build4) over (1.1.0-2build3) ... 104s Preparing to unpack .../47-curl_8.12.1-3ubuntu1_amd64.deb ... 104s Unpacking curl (8.12.1-3ubuntu1) over (8.12.1-2ubuntu1) ... 104s Preparing to unpack .../48-libcurl4t64_8.12.1-3ubuntu1_amd64.deb ... 104s Unpacking libcurl4t64:amd64 (8.12.1-3ubuntu1) over (8.12.1-2ubuntu1) ... 104s Preparing to unpack .../49-exfatprogs_1.2.8-1_amd64.deb ... 104s Unpacking exfatprogs (1.2.8-1) over (1.2.7-3) ... 104s Preparing to unpack .../50-libcurl3t64-gnutls_8.12.1-3ubuntu1_amd64.deb ... 104s Unpacking libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) over (8.12.1-2ubuntu1) ... 104s Preparing to unpack .../51-fwupd_2.0.6-4_amd64.deb ... 104s Unpacking fwupd (2.0.6-4) over (2.0.6-3) ... 104s Preparing to unpack .../52-libfwupd3_2.0.6-4_amd64.deb ... 104s Unpacking libfwupd3:amd64 (2.0.6-4) over (2.0.6-3) ... 104s Preparing to unpack .../53-libmm-glib0_1.23.4-0ubuntu3_amd64.deb ... 104s Unpacking libmm-glib0:amd64 (1.23.4-0ubuntu3) over (1.23.4-0ubuntu2) ... 104s Preparing to unpack .../54-htop_3.4.0-2_amd64.deb ... 104s Unpacking htop (3.4.0-2) over (3.3.0-5) ... 104s Preparing to unpack .../55-linux-firmware_20250310.git9e1370d3-0ubuntu1_amd64.deb ... 104s Unpacking linux-firmware (20250310.git9e1370d3-0ubuntu1) over (20250204.git0fd450ee-0ubuntu1) ... 107s Preparing to unpack .../56-initramfs-tools_0.146ubuntu1_all.deb ... 107s Unpacking initramfs-tools (0.146ubuntu1) over (0.145ubuntu3) ... 108s Preparing to unpack .../57-initramfs-tools-core_0.146ubuntu1_all.deb ... 108s Unpacking initramfs-tools-core (0.146ubuntu1) over (0.145ubuntu3) ... 108s Preparing to unpack .../58-initramfs-tools-bin_0.146ubuntu1_amd64.deb ... 108s Unpacking initramfs-tools-bin (0.146ubuntu1) over (0.145ubuntu3) ... 108s Selecting previously unselected package libdebuginfod1t64:amd64. 108s Preparing to unpack .../59-libdebuginfod1t64_0.192-4_amd64.deb ... 108s Unpacking libdebuginfod1t64:amd64 (0.192-4) ... 108s Preparing to unpack .../60-libftdi1-2_1.5-8build1_amd64.deb ... 108s Unpacking libftdi1-2:amd64 (1.5-8build1) over (1.5-8) ... 108s Preparing to unpack .../61-libgpgme11t64_1.24.2-1ubuntu2_amd64.deb ... 108s Unpacking libgpgme11t64:amd64 (1.24.2-1ubuntu2) over (1.24.2-1ubuntu1) ... 108s Preparing to unpack .../62-libjemalloc2_5.3.0-3_amd64.deb ... 108s Unpacking libjemalloc2:amd64 (5.3.0-3) over (5.3.0-2build1) ... 108s Selecting previously unselected package linux-modules-6.14.0-10-generic. 108s Preparing to unpack .../63-linux-modules-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 108s Unpacking linux-modules-6.14.0-10-generic (6.14.0-10.10) ... 108s Selecting previously unselected package linux-image-6.14.0-10-generic. 108s Preparing to unpack .../64-linux-image-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 108s Unpacking linux-image-6.14.0-10-generic (6.14.0-10.10) ... 108s Selecting previously unselected package linux-modules-extra-6.14.0-10-generic. 108s Preparing to unpack .../65-linux-modules-extra-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 108s Unpacking linux-modules-extra-6.14.0-10-generic (6.14.0-10.10) ... 109s Preparing to unpack .../66-linux-generic_6.14.0-10.10_amd64.deb ... 109s Unpacking linux-generic (6.14.0-10.10) over (6.12.0-16.16+2) ... 109s Preparing to unpack .../67-linux-image-generic_6.14.0-10.10_amd64.deb ... 109s Unpacking linux-image-generic (6.14.0-10.10) over (6.12.0-16.16+2) ... 110s Preparing to unpack .../68-linux-virtual_6.14.0-10.10_amd64.deb ... 110s Unpacking linux-virtual (6.14.0-10.10) over (6.12.0-16.16+2) ... 110s Preparing to unpack .../69-linux-image-virtual_6.14.0-10.10_amd64.deb ... 110s Unpacking linux-image-virtual (6.14.0-10.10) over (6.12.0-16.16+2) ... 110s Preparing to unpack .../70-linux-headers-virtual_6.14.0-10.10_amd64.deb ... 110s Unpacking linux-headers-virtual (6.14.0-10.10) over (6.12.0-16.16+2) ... 110s Selecting previously unselected package linux-headers-6.14.0-10. 110s Preparing to unpack .../71-linux-headers-6.14.0-10_6.14.0-10.10_all.deb ... 110s Unpacking linux-headers-6.14.0-10 (6.14.0-10.10) ... 112s Selecting previously unselected package linux-headers-6.14.0-10-generic. 112s Preparing to unpack .../72-linux-headers-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 112s Unpacking linux-headers-6.14.0-10-generic (6.14.0-10.10) ... 114s Preparing to unpack .../73-linux-headers-generic_6.14.0-10.10_amd64.deb ... 114s Unpacking linux-headers-generic (6.14.0-10.10) over (6.12.0-16.16+2) ... 114s Selecting previously unselected package linux-perf. 114s Preparing to unpack .../74-linux-perf_6.14.0-10.10_amd64.deb ... 114s Unpacking linux-perf (6.14.0-10.10) ... 114s Selecting previously unselected package linux-tools-6.14.0-10. 114s Preparing to unpack .../75-linux-tools-6.14.0-10_6.14.0-10.10_amd64.deb ... 114s Unpacking linux-tools-6.14.0-10 (6.14.0-10.10) ... 114s Selecting previously unselected package linux-tools-6.14.0-10-generic. 114s Preparing to unpack .../76-linux-tools-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 114s Unpacking linux-tools-6.14.0-10-generic (6.14.0-10.10) ... 114s Preparing to unpack .../77-pinentry-curses_1.3.1-2ubuntu3_amd64.deb ... 114s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 114s Preparing to unpack .../78-python3-lazr.uri_1.0.6-6_all.deb ... 114s Unpacking python3-lazr.uri (1.0.6-6) over (1.0.6-5) ... 114s Preparing to unpack .../79-python3-rpds-py_0.21.0-2ubuntu2_amd64.deb ... 114s Unpacking python3-rpds-py (0.21.0-2ubuntu2) over (0.21.0-2ubuntu1) ... 114s Preparing to unpack .../80-python3-systemd_235-1build6_amd64.deb ... 115s Unpacking python3-systemd (235-1build6) over (235-1build5) ... 115s Preparing to unpack .../81-python3.13-gdbm_3.13.2-2_amd64.deb ... 115s Unpacking python3.13-gdbm (3.13.2-2) over (3.13.2-1) ... 115s Preparing to unpack .../82-ubuntu-kernel-accessories_1.549_amd64.deb ... 115s Unpacking ubuntu-kernel-accessories (1.549) over (1.548) ... 115s Preparing to unpack .../83-cloud-init_25.1-0ubuntu3_all.deb ... 115s Unpacking cloud-init (25.1-0ubuntu3) over (25.1-0ubuntu2) ... 115s Preparing to unpack .../84-python3-bcrypt_4.2.0-2.1build1_amd64.deb ... 115s Unpacking python3-bcrypt (4.2.0-2.1build1) over (4.2.0-2.1) ... 115s Setting up linux-headers-6.14.0-10 (6.14.0-10.10) ... 115s Setting up media-types (13.0.0) ... 115s Installing new version of config file /etc/mime.types ... 115s Setting up linux-headers-6.14.0-10-generic (6.14.0-10.10) ... 115s Setting up ubuntu-kernel-accessories (1.549) ... 115s Setting up libapparmor1:amd64 (4.1.0~beta5-0ubuntu8) ... 115s Setting up pci.ids (0.0~2025.03.09-1) ... 115s Setting up libnewt0.52:amd64 (0.52.24-4ubuntu2) ... 115s Setting up apt-utils (2.9.33) ... 115s Setting up libdebuginfod-common (0.192-4) ... 115s Setting up exfatprogs (1.2.8-1) ... 115s Setting up linux-firmware (20250310.git9e1370d3-0ubuntu1) ... 115s Setting up bpftool (7.6.0+6.14.0-10.10) ... 115s Setting up libestr0:amd64 (0.1.11-2) ... 115s Setting up libbrotli1:amd64 (1.1.0-2build4) ... 115s Setting up libsqlite3-0:amd64 (3.46.1-2) ... 115s Setting up dosfstools (4.2-1.2) ... 115s Setting up rsyslog (8.2412.0-2ubuntu2) ... 115s info: The user `syslog' is already a member of `adm'. 116s Setting up binutils-common:amd64 (2.44-3ubuntu1) ... 116s Setting up libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) ... 116s Setting up linux-libc-dev:amd64 (6.14.0-10.10) ... 116s Setting up libctf-nobfd0:amd64 (2.44-3ubuntu1) ... 116s Setting up systemd (257.3-1ubuntu3) ... 116s /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring. 116s Created symlink '/run/systemd/system/tmp.mount' → '/dev/null'. 116s /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring. 117s Setting up libparted2t64:amd64 (3.6-5) ... 117s Removing 'diversion of /lib/x86_64-linux-gnu/libparted.so.2 to /lib/x86_64-linux-gnu/libparted.so.2.usr-is-merged by libparted2t64' 117s Removing 'diversion of /lib/x86_64-linux-gnu/libparted.so.2.0.5 to /lib/x86_64-linux-gnu/libparted.so.2.0.5.usr-is-merged by libparted2t64' 117s Setting up linux-headers-generic (6.14.0-10.10) ... 117s Setting up libjemalloc2:amd64 (5.3.0-3) ... 117s Setting up locales (2.41-1ubuntu1) ... 117s Installing new version of config file /etc/locale.alias ... 118s Generating locales (this might take a while)... 119s en_US.UTF-8... done 119s Generation complete. 119s Setting up libsframe1:amd64 (2.44-3ubuntu1) ... 119s Setting up libpython3.13-minimal:amd64 (3.13.2-2) ... 119s Setting up apparmor (4.1.0~beta5-0ubuntu8) ... 120s Installing new version of config file /etc/apparmor.d/fusermount3 ... 120s Installing new version of config file /etc/apparmor.d/lsusb ... 120s Installing new version of config file /etc/apparmor.d/openvpn ... 121s Reloading AppArmor profiles 122s Setting up libftdi1-2:amd64 (1.5-8build1) ... 122s Setting up libglib2.0-data (2.84.0-1) ... 122s Setting up systemd-cryptsetup (257.3-1ubuntu3) ... 122s Setting up libncurses6:amd64 (6.5+20250216-2) ... 122s Setting up strace (6.13+ds-1ubuntu1) ... 122s Setting up xz-utils (5.6.4-1) ... 122s Setting up systemd-timesyncd (257.3-1ubuntu3) ... 123s systemd-time-wait-sync.service is a disabled or a static unit not running, not starting it. 123s Setting up libatomic1:amd64 (15-20250222-0ubuntu1) ... 123s Setting up udev (257.3-1ubuntu3) ... 124s Setting up linux-modules-6.14.0-10-generic (6.14.0-10.10) ... 126s Setting up libncursesw6:amd64 (6.5+20250216-2) ... 126s Setting up libpci3:amd64 (1:3.13.0-2) ... 126s Setting up whiptail (0.52.24-4ubuntu2) ... 126s Setting up python-apt-common (2.9.9build1) ... 126s Setting up pnp.ids (0.393-3) ... 126s Setting up libnl-3-200:amd64 (3.7.0-1) ... 126s Setting up python3.13-minimal (3.13.2-2) ... 127s Setting up libgpgme11t64:amd64 (1.24.2-1ubuntu2) ... 127s Setting up libbinutils:amd64 (2.44-3ubuntu1) ... 127s Setting up libc-dev-bin (2.41-1ubuntu1) ... 127s Setting up libpython3.13-stdlib:amd64 (3.13.2-2) ... 127s Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2ubuntu5) ... 127s Setting up rsync (3.4.1+ds1-3) ... 127s rsync.service is a disabled or a static unit not running, not starting it. 127s Setting up python3.13-gdbm (3.13.2-2) ... 127s Setting up libpython3-stdlib:amd64 (3.13.2-2) ... 127s Setting up systemd-resolved (257.3-1ubuntu3) ... 128s Setting up initramfs-tools-bin (0.146ubuntu1) ... 128s Setting up ncurses-term (6.5+20250216-2) ... 128s Setting up libctf0:amd64 (2.44-3ubuntu1) ... 128s Setting up libpython3.13:amd64 (3.13.2-2) ... 128s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 128s Setting up libdebuginfod1t64:amd64 (0.192-4) ... 128s Setting up systemd-sysv (257.3-1ubuntu3) ... 128s Setting up linux-headers-virtual (6.14.0-10.10) ... 128s Setting up libcurl4t64:amd64 (8.12.1-3ubuntu1) ... 128s Setting up python3.13 (3.13.2-2) ... 129s Setting up htop (3.4.0-2) ... 129s Setting up linux-image-6.14.0-10-generic (6.14.0-10.10) ... 131s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.12.0-16-generic 131s I: /boot/initrd.img.old is now a symlink to initrd.img-6.12.0-16-generic 131s I: /boot/vmlinuz is now a symlink to vmlinuz-6.14.0-10-generic 131s I: /boot/initrd.img is now a symlink to initrd.img-6.14.0-10-generic 131s Setting up parted (3.6-5) ... 131s Setting up libnss-systemd:amd64 (257.3-1ubuntu3) ... 131s Setting up python3 (3.13.2-2) ... 131s Setting up python3-newt:amd64 (0.52.24-4ubuntu2) ... 131s Setting up python3-markupsafe (2.1.5-1build4) ... 131s Setting up linux-modules-extra-6.14.0-10-generic (6.14.0-10.10) ... 134s Setting up libnl-route-3-200:amd64 (3.7.0-1) ... 134s Setting up hwdata (0.393-3) ... 134s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 134s Setting up libglib2.0-0t64:amd64 (2.84.0-1) ... 134s No schema files found: doing nothing. 134s Setting up libgprofng0:amd64 (2.44-3ubuntu1) ... 134s Setting up linux-perf (6.14.0-10.10) ... 134s Setting up gir1.2-glib-2.0:amd64 (2.84.0-1) ... 134s Setting up pciutils (1:3.13.0-2) ... 134s Setting up python3-rpds-py (0.21.0-2ubuntu2) ... 134s Setting up libmm-glib0:amd64 (1.23.4-0ubuntu3) ... 134s Setting up libnl-genl-3-200:amd64 (3.7.0-1) ... 134s Setting up libpam-systemd:amd64 (257.3-1ubuntu3) ... 134s Setting up libc6-dev:amd64 (2.41-1ubuntu1) ... 134s Setting up libgirepository-1.0-1:amd64 (1.83.4-1) ... 134s Setting up curl (8.12.1-3ubuntu1) ... 134s Setting up linux-image-virtual (6.14.0-10.10) ... 134s Setting up initramfs-tools-core (0.146ubuntu1) ... 134s Setting up linux-tools-common (6.14.0-10.10) ... 134s Setting up python3-systemd (235-1build6) ... 134s Setting up python3-cffi-backend:amd64 (1.17.1-2build2) ... 134s Setting up binutils-x86-64-linux-gnu (2.44-3ubuntu1) ... 134s Setting up linux-image-generic (6.14.0-10.10) ... 134s Setting up python3-dbus (1.3.2-5build5) ... 135s Setting up linux-tools-6.14.0-10 (6.14.0-10.10) ... 135s Setting up initramfs-tools (0.146ubuntu1) ... 135s Installing new version of config file /etc/kernel/postinst.d/initramfs-tools ... 135s Installing new version of config file /etc/kernel/postrm.d/initramfs-tools ... 135s update-initramfs: deferring update (trigger activated) 135s Setting up linux-generic (6.14.0-10.10) ... 135s Setting up ubuntu-minimal (1.549) ... 135s Setting up python3-apt (2.9.9build1) ... 135s Setting up python3-bcrypt (4.2.0-2.1build1) ... 135s Setting up python3-yaml (6.0.2-1build2) ... 135s Setting up libfwupd3:amd64 (2.0.6-4) ... 135s Setting up python3-lazr.uri (1.0.6-6) ... 135s Setting up binutils (2.44-3ubuntu1) ... 135s Setting up ubuntu-standard (1.549) ... 135s Setting up cloud-init-base (25.1-0ubuntu3) ... 137s Setting up linux-virtual (6.14.0-10.10) ... 137s Setting up gir1.2-girepository-2.0:amd64 (1.83.4-1) ... 137s Setting up python3-gi (3.50.0-4build1) ... 137s Setting up linux-tools-6.14.0-10-generic (6.14.0-10.10) ... 137s Setting up fwupd (2.0.6-4) ... 138s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 138s fwupd.service is a disabled or a static unit not running, not starting it. 138s Setting up cloud-init (25.1-0ubuntu3) ... 138s Processing triggers for man-db (2.13.0-1) ... 140s Processing triggers for dbus (1.16.2-1ubuntu1) ... 140s Processing triggers for shared-mime-info (2.4-5) ... 140s Warning: program compiled against libxml 212 using older 209 140s Processing triggers for libc-bin (2.41-1ubuntu1) ... 140s Processing triggers for linux-image-6.14.0-10-generic (6.14.0-10.10) ... 140s /etc/kernel/postinst.d/initramfs-tools: 140s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 140s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 152s /etc/kernel/postinst.d/zz-update-grub: 152s Sourcing file `/etc/default/grub' 152s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 152s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 152s Generating grub configuration file ... 152s Found linux image: /boot/vmlinuz-6.14.0-10-generic 152s Found initrd image: /boot/initrd.img-6.14.0-10-generic 152s Found linux image: /boot/vmlinuz-6.12.0-16-generic 152s Found initrd image: /boot/initrd.img-6.12.0-16-generic 152s Found linux image: /boot/vmlinuz-6.11.0-8-generic 152s Found initrd image: /boot/initrd.img-6.11.0-8-generic 153s Warning: os-prober will not be executed to detect other bootable partitions. 153s Systems on them will not be added to the GRUB boot configuration. 153s Check GRUB_DISABLE_OS_PROBER documentation entry. 153s Adding boot menu entry for UEFI Firmware Settings ... 153s done 153s Processing triggers for initramfs-tools (0.146ubuntu1) ... 153s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 153s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 165s Reading package lists... 165s Building dependency tree... 165s Reading state information... 165s Solving dependencies... 165s The following packages will be REMOVED: 165s libnl-genl-3-200* libnsl2* libpython3.12-minimal* libpython3.12-stdlib* 165s libpython3.12t64* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 165s linux-headers-6.12.0-16* linux-headers-6.12.0-16-generic* 165s linux-image-6.11.0-8-generic* linux-image-6.12.0-16-generic* 165s linux-modules-6.11.0-8-generic* linux-modules-6.12.0-16-generic* 165s linux-modules-extra-6.12.0-16-generic* linux-tools-6.11.0-8* 165s linux-tools-6.11.0-8-generic* linux-tools-6.12.0-16* 165s linux-tools-6.12.0-16-generic* 166s 0 upgraded, 0 newly installed, 18 to remove and 5 not upgraded. 166s After this operation, 545 MB disk space will be freed. 166s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 148643 files and directories currently installed.) 166s Removing libnl-genl-3-200:amd64 (3.7.0-1) ... 166s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 166s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 166s Removing libpython3.12t64:amd64 (3.12.9-1) ... 166s Removing libpython3.12-stdlib:amd64 (3.12.9-1) ... 166s Removing libnsl2:amd64 (1.3.0-3build3) ... 166s Removing libpython3.12-minimal:amd64 (3.12.9-1) ... 166s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 167s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 169s Removing linux-headers-6.12.0-16-generic (6.12.0-16.16) ... 170s Removing linux-headers-6.12.0-16 (6.12.0-16.16) ... 172s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 172s /etc/kernel/postrm.d/initramfs-tools: 172s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 172s /etc/kernel/postrm.d/zz-update-grub: 172s Sourcing file `/etc/default/grub' 172s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 172s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 172s Generating grub configuration file ... 172s Found linux image: /boot/vmlinuz-6.14.0-10-generic 172s Found initrd image: /boot/initrd.img-6.14.0-10-generic 173s Found linux image: /boot/vmlinuz-6.12.0-16-generic 173s Found initrd image: /boot/initrd.img-6.12.0-16-generic 173s Warning: os-prober will not be executed to detect other bootable partitions. 173s Systems on them will not be added to the GRUB boot configuration. 173s Check GRUB_DISABLE_OS_PROBER documentation entry. 173s Adding boot menu entry for UEFI Firmware Settings ... 173s done 173s Removing linux-image-6.12.0-16-generic (6.12.0-16.16) ... 173s W: Removing the running kernel 173s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic 173s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic 173s /etc/kernel/postrm.d/initramfs-tools: 173s update-initramfs: Deleting /boot/initrd.img-6.12.0-16-generic 173s /etc/kernel/postrm.d/zz-update-grub: 173s Sourcing file `/etc/default/grub' 173s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 173s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 173s Generating grub configuration file ... 173s Found linux image: /boot/vmlinuz-6.14.0-10-generic 173s Found initrd image: /boot/initrd.img-6.14.0-10-generic 174s Warning: os-prober will not be executed to detect other bootable partitions. 174s Systems on them will not be added to the GRUB boot configuration. 174s Check GRUB_DISABLE_OS_PROBER documentation entry. 174s Adding boot menu entry for UEFI Firmware Settings ... 174s done 174s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 174s Removing linux-modules-extra-6.12.0-16-generic (6.12.0-16.16) ... 176s Removing linux-modules-6.12.0-16-generic (6.12.0-16.16) ... 176s Removing linux-tools-6.12.0-16-generic (6.12.0-16.16) ... 176s Removing linux-tools-6.12.0-16 (6.12.0-16.16) ... 176s Processing triggers for libc-bin (2.41-1ubuntu1) ... 176s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76972 files and directories currently installed.) 176s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 176s Purging configuration files for libpython3.12-minimal:amd64 (3.12.9-1) ... 176s Purging configuration files for linux-modules-extra-6.12.0-16-generic (6.12.0-16.16) ... 176s Purging configuration files for linux-modules-6.12.0-16-generic (6.12.0-16.16) ... 176s dpkg: warning: while removing linux-modules-6.12.0-16-generic, directory '/lib/modules/6.12.0-16-generic' not empty so not removed 176s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 176s Purging configuration files for linux-image-6.12.0-16-generic (6.12.0-16.16) ... 176s rmdir: failed to remove '/lib/modules/6.12.0-16-generic': Directory not empty 176s autopkgtest [22:00:39]: upgrading testbed (apt dist-upgrade and autopurge) 177s Reading package lists... 177s Building dependency tree... 177s Reading state information... 177s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 177s Starting 2 pkgProblemResolver with broken count: 0 177s Done 178s Entering ResolveByKeep 178s 179s Calculating upgrade... 179s The following packages will be upgraded: 179s libc-bin libc-dev-bin libc6 libc6-dev locales 179s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 179s Need to get 10.5 MB of archives. 179s After this operation, 1024 B of additional disk space will be used. 179s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6-dev amd64 2.41-1ubuntu2 [2183 kB] 180s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-dev-bin amd64 2.41-1ubuntu2 [24.7 kB] 180s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6 amd64 2.41-1ubuntu2 [3327 kB] 180s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-bin amd64 2.41-1ubuntu2 [700 kB] 180s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 locales all 2.41-1ubuntu2 [4246 kB] 180s Preconfiguring packages ... 180s Fetched 10.5 MB in 1s (8171 kB/s) 180s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 180s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_amd64.deb ... 180s Unpacking libc6-dev:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 181s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_amd64.deb ... 181s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 181s Preparing to unpack .../libc6_2.41-1ubuntu2_amd64.deb ... 181s Unpacking libc6:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 181s Setting up libc6:amd64 (2.41-1ubuntu2) ... 181s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 181s Preparing to unpack .../libc-bin_2.41-1ubuntu2_amd64.deb ... 181s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 181s Setting up libc-bin (2.41-1ubuntu2) ... 181s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 181s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 181s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 182s Setting up locales (2.41-1ubuntu2) ... 182s Generating locales (this might take a while)... 184s en_US.UTF-8... done 184s Generation complete. 184s Setting up libc-dev-bin (2.41-1ubuntu2) ... 184s Setting up libc6-dev:amd64 (2.41-1ubuntu2) ... 184s Processing triggers for man-db (2.13.0-1) ... 184s Processing triggers for systemd (257.3-1ubuntu3) ... 186s Reading package lists... 186s Building dependency tree... 186s Reading state information... 186s Starting pkgProblemResolver with broken count: 0 186s Starting 2 pkgProblemResolver with broken count: 0 186s Done 187s Solving dependencies... 187s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 187s autopkgtest [22:00:50]: rebooting testbed after setup commands that affected boot 210s autopkgtest [22:01:13]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 16:07:00 UTC 2025 213s autopkgtest [22:01:16]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-degnorm 215s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-degnorm 1.16.0+ds-2 (dsc) [2420 B] 215s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-degnorm 1.16.0+ds-2 (tar) [1682 kB] 215s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-degnorm 1.16.0+ds-2 (diff) [3192 B] 215s gpgv: Signature made Tue Jan 14 07:37:59 2025 UTC 215s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 215s gpgv: issuer "crusoe@debian.org" 215s gpgv: Can't check signature: No public key 215s dpkg-source: warning: cannot verify inline signature for ./r-bioc-degnorm_1.16.0+ds-2.dsc: no acceptable signature found 216s autopkgtest [22:01:19]: testing package r-bioc-degnorm version 1.16.0+ds-2 216s autopkgtest [22:01:19]: build not needed 218s autopkgtest [22:01:21]: test pkg-r-autopkgtest: preparing testbed 219s Reading package lists... 219s Building dependency tree... 219s Reading state information... 219s Starting pkgProblemResolver with broken count: 0 219s Starting 2 pkgProblemResolver with broken count: 0 219s Done 220s The following NEW packages will be installed: 220s build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu 220s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 220s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-14 220s g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 220s gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-14 220s gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools 220s javascript-common libasan8 libblas-dev libblas3 libboost-dev 220s libboost1.83-dev libbz2-dev libcairo2 libcc1-0 libdatrie1 libdeflate-dev 220s libdeflate0 libfontconfig1 libgcc-14-dev libgfortran-14-dev libgfortran5 220s libgomp1 libgraphite2-3 libharfbuzz0b libhwasan0 libice6 libicu-dev libisl23 220s libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 220s libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 220s libjs-highlight.js libjs-jquery libjs-jquery-datatables 220s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax 220s libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify 220s libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 220s liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev 220s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 220s libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 220s libpixman-1-0 libpkgconf3 libpng-dev libquadmath0 libreadline-dev 220s libsharpyuv0 libsm6 libstdc++-14-dev libtcl8.6 libthai-data libthai0 220s libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxcb-render0 220s libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 littler 220s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 220s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 220s r-bioc-annotationdbi r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics 220s r-bioc-biocio r-bioc-biocparallel r-bioc-biomart r-bioc-biostrings 220s r-bioc-degnorm r-bioc-delayedarray r-bioc-genomeinfodb 220s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 220s r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest r-bioc-matrixgenerics 220s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 220s r-bioc-s4vectors r-bioc-sparsearray r-bioc-summarizedexperiment 220s r-bioc-txdbmaker r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc 220s r-cran-abind r-cran-askpass r-cran-assertthat r-cran-base64enc r-cran-bh 220s r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bslib r-cran-ca 220s r-cran-cachem r-cran-callr r-cran-cli r-cran-cluster r-cran-codetools 220s r-cran-colorspace r-cran-colourpicker r-cran-commonmark r-cran-cpp11 220s r-cran-crayon r-cran-crosstalk r-cran-curl r-cran-data.table r-cran-dbi 220s r-cran-dbplyr r-cran-dendextend r-cran-digest r-cran-doparallel r-cran-dplyr 220s r-cran-egg r-cran-evaluate r-cran-fansi r-cran-farver r-cran-fastmap 220s r-cran-filelock r-cran-fontawesome r-cran-foreach r-cran-formatr r-cran-fs 220s r-cran-futile.logger r-cran-futile.options r-cran-gclus r-cran-generics 220s r-cran-ggplot2 r-cran-glue r-cran-gridextra r-cran-gtable r-cran-heatmaply 220s r-cran-highr r-cran-hms r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv 220s r-cran-httr r-cran-httr2 r-cran-isoband r-cran-iterators r-cran-jquerylib 220s r-cran-jsonlite r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later 220s r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-littler 220s r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats r-cran-memoise 220s r-cran-mgcv r-cran-mime r-cran-miniui r-cran-munsell r-cran-nlme 220s r-cran-openssl r-cran-permute r-cran-pillar r-cran-pkgconfig 220s r-cran-pkgkitten r-cran-plogr r-cran-plotly r-cran-plyr r-cran-png 220s r-cran-prettyunits r-cran-processx r-cran-progress r-cran-promises r-cran-ps 220s r-cran-purrr r-cran-qap r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer 220s r-cran-rcpp r-cran-rcpparmadillo r-cran-rcurl r-cran-registry 220s r-cran-reshape2 r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown 220s r-cran-rsqlite r-cran-sass r-cran-scales r-cran-seriation r-cran-shiny 220s r-cran-shinyjs r-cran-snow r-cran-sourcetools r-cran-stringi r-cran-stringr 220s r-cran-sys r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex 220s r-cran-tsp r-cran-utf8 r-cran-vctrs r-cran-vegan r-cran-viridis 220s r-cran-viridislite r-cran-webshot r-cran-withr r-cran-xfun r-cran-xml 220s r-cran-xml2 r-cran-xtable r-cran-yaml unzip x11-common xdg-utils zip 220s zlib1g-dev 220s 0 upgraded, 292 newly installed, 0 to remove and 0 not upgraded. 220s Need to get 353 MB of archives. 220s After this operation, 1168 MB of additional disk space will be used. 220s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 221s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 221s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [11.9 MB] 221s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-17ubuntu3 [1030 B] 221s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [5586 B] 221s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.2.0-1ubuntu1 [22.4 kB] 221s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 15-20250222-0ubuntu1 [47.0 kB] 221s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 15-20250222-0ubuntu1 [148 kB] 221s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 15-20250222-0ubuntu1 [28.6 kB] 221s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 15-20250222-0ubuntu1 [3055 kB] 221s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 15-20250222-0ubuntu1 [1355 kB] 221s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 15-20250222-0ubuntu1 [2756 kB] 221s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 15-20250222-0ubuntu1 [1205 kB] 222s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 15-20250222-0ubuntu1 [1677 kB] 222s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 15-20250222-0ubuntu1 [152 kB] 222s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-17ubuntu3 [2816 kB] 222s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [23.3 MB] 222s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-17ubuntu3 [536 kB] 222s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1208 B] 222s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.2.0-1ubuntu1 [5004 B] 222s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-17ubuntu3 [2486 kB] 222s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [13.4 MB] 223s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-17ubuntu3 [21.8 kB] 223s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [968 B] 223s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.2.0-1ubuntu1 [1100 B] 223s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 223s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 dctrl-tools amd64 2.24-3build3 [106 kB] 223s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 223s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 223s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-2ubuntu1 [37.4 kB] 223s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-2ubuntu1 [164 kB] 223s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-2ubuntu1 [180 kB] 223s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 223s Get:34 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 223s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 223s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 15-20250222-0ubuntu1 [919 kB] 223s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran-14-dev amd64 14.2.0-17ubuntu3 [966 kB] 223s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [12.6 MB] 223s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14 amd64 14.2.0-17ubuntu3 [13.6 kB] 223s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1022 B] 223s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran amd64 4:14.2.0-1ubuntu1 [1174 B] 223s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 icu-devtools amd64 76.1-1ubuntu2 [237 kB] 223s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 12 [5216 B] 223s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 223s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas-dev amd64 3.12.1-2 [338 kB] 223s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost1.83-dev amd64 1.83.0-4.1ubuntu2 [10.7 MB] 223s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost-dev amd64 1.83.0.2ubuntu1 [4468 B] 223s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libbz2-dev amd64 1.0.8-6 [33.8 kB] 223s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 223s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 223s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 223s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 223s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 223s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 223s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB] 223s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate-dev amd64 1.23-1 [71.7 kB] 223s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 224s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB] 224s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 224s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 224s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libicu-dev amd64 76.1-1ubuntu2 [12.6 MB] 224s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 224s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8-dev amd64 2.1.5-3ubuntu2 [324 kB] 224s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 224s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 224s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 224s Get:67 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 224s Get:68 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 224s Get:69 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 224s Get:70 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 224s Get:71 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 224s Get:72 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 224s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 224s Get:74 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 224s Get:75 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 224s Get:76 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 224s Get:77 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 224s Get:78 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 224s Get:79 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 224s Get:80 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 224s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 224s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack-dev amd64 3.12.1-2 [6489 kB] 224s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 224s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 liblua5.4-0 amd64 5.4.7-1 [196 kB] 224s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses-dev amd64 6.5+20250216-2 [424 kB] 224s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 224s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 224s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.56.2-1 [255 kB] 224s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.56.2-1 [52.6 kB] 224s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.56.2-1 [29.1 kB] 224s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB] 224s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB] 224s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.45-1 [268 kB] 224s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-32-0 amd64 10.45-1 [251 kB] 224s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-posix3 amd64 10.45-1 [7204 B] 224s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-dev amd64 10.45-1 [908 kB] 224s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 libpkgconf3 amd64 1.8.1-4 [32.3 kB] 224s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 224s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 libpng-dev amd64 1.6.47-1 [298 kB] 224s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libreadline-dev amd64 8.2-6 [184 kB] 224s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 225s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 225s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB] 225s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 225s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 225s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 225s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 225s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 225s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB] 225s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 225s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu2 [185 kB] 225s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 225s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 225s Get:114 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.3-1 [28.9 MB] 226s Get:115 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-2 [96.6 kB] 226s Get:116 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-2 [2554 B] 226s Get:117 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 227s Get:118 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 227s Get:119 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 227s Get:120 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 227s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc amd64 3.1.11.1+ds-2 [27.2 MB] 228s Get:122 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma-dev amd64 5.6.4-1 [189 kB] 228s Get:123 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf-bin amd64 1.8.1-4 [21.6 kB] 228s Get:124 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf amd64 1.8.1-4 [16.8 kB] 228s Get:125 http://ftpmaster.internal/ubuntu plucky/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3 [193 kB] 228s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-dev all 4.4.3-1 [4176 B] 228s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 228s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 228s Get:129 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biobase amd64 2.66.0-2 [2332 kB] 228s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2065 kB] 228s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-iranges amd64 2.40.1-2 [2310 kB] 228s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dbi all 1.2.3-1 [853 kB] 228s Get:133 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bit amd64 4.6.0+dfsg-1 [466 kB] 228s Get:134 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bit64 amd64 4.6.0-1-1ubuntu2 [501 kB] 228s Get:135 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.5-1 [1719 kB] 228s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB] 228s Get:137 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 228s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 228s Get:139 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 228s Get:140 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-blob all 1.2.4-1 [49.8 kB] 228s Get:141 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 228s Get:142 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 228s Get:143 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 228s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 228s Get:145 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plogr all 0.2.0-3build1 [15.1 kB] 228s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cpp11 all 0.5.2-1 [233 kB] 228s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rsqlite amd64 2.3.9-1 [1467 kB] 228s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-curl amd64 6.2.1+dfsg-1ubuntu1 [197 kB] 228s Get:149 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB] 228s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 228s Get:151 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB] 228s Get:152 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB] 228s Get:153 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-openssl amd64 2.3.2+dfsg-1 [407 kB] 228s Get:154 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB] 228s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 228s Get:156 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-png amd64 0.1-8-1build2 [40.6 kB] 229s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 229s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-xvector amd64 0.46.0-2 [620 kB] 229s Get:159 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 229s Get:160 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 229s Get:161 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 229s Get:162 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB] 229s Get:163 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biostrings amd64 2.74.1+dfsg-2 [13.3 MB] 230s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-keggrest all 1.46.0+dfsg-2 [183 kB] 230s Get:165 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-annotationdbi all 1.68.0-2 [4857 kB] 230s Get:166 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB] 230s Get:167 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 230s Get:168 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 230s Get:169 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 230s Get:170 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 230s Get:171 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB] 230s Get:172 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 230s Get:173 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB] 230s Get:174 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB] 230s Get:175 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-purrr amd64 1.0.4-1 [552 kB] 230s Get:176 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringi amd64 1.8.4-1build1 [927 kB] 230s Get:177 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 230s Get:178 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 230s Get:179 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dbplyr all 2.5.0+dfsg-1 [1233 kB] 230s Get:180 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-filelock amd64 1.0.3-1 [29.6 kB] 230s Get:181 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocfilecache all 2.14.0+dfsg-2 [300 kB] 230s Get:182 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 230s Get:183 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-formatr all 1.14-2 [152 kB] 230s Get:184 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 230s Get:185 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 230s Get:186 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 230s Get:187 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 230s Get:188 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-codetools all 0.2-20-1 [90.5 kB] 230s Get:189 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bh all 1.84.0-1 [5962 B] 230s Get:190 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocparallel amd64 1.40.0-2 [1337 kB] 230s Get:191 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-hms all 1.1.3-1 [96.5 kB] 230s Get:192 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-prettyunits all 1.2.0-1 [162 kB] 230s Get:193 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-progress all 1.2.3-1 [91.9 kB] 230s Get:194 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 230s Get:195 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httr2 all 1.1.1-1 [752 kB] 230s Get:196 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB] 230s Get:197 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xml2 amd64 1.3.7-1 [334 kB] 230s Get:198 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biomart all 2.62.1+dfsg-1 [444 kB] 231s Get:199 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 231s Get:200 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.14-1 [1998 kB] 231s Get:201 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomicranges amd64 1.58.0+dfsg-2 [2083 kB] 231s Get:202 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xml amd64 3.99-0.18-1 [1748 kB] 231s Get:203 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bitops amd64 1.0-9-1 [30.3 kB] 231s Get:204 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rhtslib amd64 3.2.0+dfsg-2 [1499 kB] 231s Get:205 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rsamtools amd64 2.22.0+dfsg-2 [3745 kB] 231s Get:206 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixstats amd64 1.5.0-1 [542 kB] 231s Get:207 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 232s Get:208 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 232s Get:209 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrix amd64 1.7-3-1 [4349 kB] 232s Get:210 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-abind all 1.4-8-1 [66.9 kB] 232s Get:211 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-s4arrays amd64 1.6.0+dfsg-2 [698 kB] 232s Get:212 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-sparsearray amd64 1.6.2+dfsg-1 [1392 kB] 232s Get:213 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-delayedarray amd64 0.32.0+dfsg-2 [2064 kB] 232s Get:214 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 232s Get:215 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomicalignments amd64 1.42.0-2 [2165 kB] 232s Get:216 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcurl amd64 1.98-1.16+dfsg-1 [807 kB] 232s Get:217 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rjson amd64 0.2.23-1 [104 kB] 232s Get:218 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB] 232s Get:219 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-restfulr amd64 0.0.15-1 [380 kB] 232s Get:220 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rtracklayer amd64 1.66.0-2 [5227 kB] 232s Get:221 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomicfeatures all 1.58.0+dfsg-2 [937 kB] 232s Get:222 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-txdbmaker all 1.2.1+ds-2 [875 kB] 232s Get:223 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-iterators all 1.0.14-1 [336 kB] 232s Get:224 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-foreach all 1.5.2-1 [124 kB] 232s Get:225 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-doparallel all 1.0.17-1 [189 kB] 232s Get:226 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 232s Get:227 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 232s Get:228 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mass amd64 7.3-64-1 [1114 kB] 232s Get:229 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nlme amd64 3.1.167-1 [2320 kB] 232s Get:230 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB] 232s Get:231 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB] 232s Get:232 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 232s Get:233 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colorspace amd64 2.1-1+dfsg-1 [1563 kB] 233s Get:234 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-munsell all 0.5.1-1 [213 kB] 233s Get:235 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 233s Get:236 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridislite all 0.4.2-2 [1088 kB] 233s Get:237 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scales all 1.3.0-1 [603 kB] 233s Get:238 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 233s Get:239 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 233s Get:240 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 233s Get:241 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 1.0.3-1 [114 kB] 233s Get:242 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xfun amd64 0.51+dfsg-1 [574 kB] 233s Get:243 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 233s Get:244 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 233s Get:245 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 233s Get:246 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 233s Get:247 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB] 233s Get:248 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 233s Get:249 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 233s Get:250 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 233s Get:251 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tinytex all 0.56-1 [148 kB] 233s Get:252 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-modernizr all 3.13.0-0.1 [101 kB] 233s Get:253 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB] 233s Get:254 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB] 233s Get:255 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 233s Get:256 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 233s Get:257 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 233s Get:258 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.2-2 [137 kB] 233s Get:259 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 233s Get:260 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 233s Get:261 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 233s Get:262 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 233s Get:263 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lazyeval amd64 0.2.2-1build1 [144 kB] 233s Get:264 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 233s Get:265 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-data.table amd64 1.17.0+dfsg-1 [2168 kB] 234s Get:266 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-miniui all 0.1.1.1-3build1 [36.1 kB] 234s Get:267 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shinyjs all 2.1.0-1 [967 kB] 234s Get:268 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colourpicker all 1.3.0+dfsg-1 [1191 kB] 234s Get:269 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plotly all 4.10.4+dfsg-2 [3666 kB] 234s Get:270 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gridextra all 2.3-3build1 [1024 kB] 234s Get:271 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridis all 0.6.5-1 [2770 kB] 234s Get:272 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dendextend all 1.18.1+dfsg-1 [984 kB] 234s Get:273 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB] 234s Get:274 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reshape2 amd64 1.4.4-2build1 [114 kB] 234s Get:275 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ca all 0.71.1-2build1 [243 kB] 234s Get:276 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cluster amd64 2.1.8.1-1 [579 kB] 234s Get:277 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gclus all 1.3.2-2build1 [406 kB] 234s Get:278 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-qap amd64 0.1-2-1 [365 kB] 234s Get:279 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-registry all 0.5-1-2build1 [202 kB] 234s Get:280 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tsp amd64 1.2-4-1 [627 kB] 234s Get:281 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-permute all 0.9-7-1 [228 kB] 234s Get:282 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vegan amd64 2.6-10+dfsg-1ubuntu2 [3145 kB] 234s Get:283 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-seriation amd64 1.5.7-1 [1343 kB] 234s Get:284 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ps amd64 1.9.0-1 [408 kB] 234s Get:285 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-processx amd64 3.8.6-1 [365 kB] 234s Get:286 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 235s Get:287 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-webshot all 0.5.5-1 [185 kB] 235s Get:288 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-assertthat all 0.2.1-2build1 [56.5 kB] 235s Get:289 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-egg all 0.4.5-3build1 [786 kB] 235s Get:290 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-heatmaply all 1.5.0+dfsg-1 [278 kB] 235s Get:291 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpparmadillo amd64 14.2.3-1-1 [864 kB] 235s Get:292 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-degnorm amd64 1.16.0+ds-2 [1525 kB] 235s Preconfiguring packages ... 235s Fetched 353 MB in 15s (24.3 MB/s) 236s Selecting previously unselected package libisl23:amd64. 236s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 236s Preparing to unpack .../000-libisl23_0.27-1_amd64.deb ... 236s Unpacking libisl23:amd64 (0.27-1) ... 236s Selecting previously unselected package libmpc3:amd64. 236s Preparing to unpack .../001-libmpc3_1.3.1-1build2_amd64.deb ... 236s Unpacking libmpc3:amd64 (1.3.1-1build2) ... 236s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 236s Preparing to unpack .../002-cpp-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 236s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 236s Selecting previously unselected package cpp-14. 236s Preparing to unpack .../003-cpp-14_14.2.0-17ubuntu3_amd64.deb ... 236s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 236s Selecting previously unselected package cpp-x86-64-linux-gnu. 236s Preparing to unpack .../004-cpp-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 236s Unpacking cpp-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 236s Selecting previously unselected package cpp. 236s Preparing to unpack .../005-cpp_4%3a14.2.0-1ubuntu1_amd64.deb ... 236s Unpacking cpp (4:14.2.0-1ubuntu1) ... 236s Selecting previously unselected package libcc1-0:amd64. 236s Preparing to unpack .../006-libcc1-0_15-20250222-0ubuntu1_amd64.deb ... 236s Unpacking libcc1-0:amd64 (15-20250222-0ubuntu1) ... 236s Selecting previously unselected package libgomp1:amd64. 236s Preparing to unpack .../007-libgomp1_15-20250222-0ubuntu1_amd64.deb ... 236s Unpacking libgomp1:amd64 (15-20250222-0ubuntu1) ... 236s Selecting previously unselected package libitm1:amd64. 236s Preparing to unpack .../008-libitm1_15-20250222-0ubuntu1_amd64.deb ... 236s Unpacking libitm1:amd64 (15-20250222-0ubuntu1) ... 236s Selecting previously unselected package libasan8:amd64. 236s Preparing to unpack .../009-libasan8_15-20250222-0ubuntu1_amd64.deb ... 236s Unpacking libasan8:amd64 (15-20250222-0ubuntu1) ... 236s Selecting previously unselected package liblsan0:amd64. 236s Preparing to unpack .../010-liblsan0_15-20250222-0ubuntu1_amd64.deb ... 236s Unpacking liblsan0:amd64 (15-20250222-0ubuntu1) ... 236s Selecting previously unselected package libtsan2:amd64. 236s Preparing to unpack .../011-libtsan2_15-20250222-0ubuntu1_amd64.deb ... 236s Unpacking libtsan2:amd64 (15-20250222-0ubuntu1) ... 236s Selecting previously unselected package libubsan1:amd64. 236s Preparing to unpack .../012-libubsan1_15-20250222-0ubuntu1_amd64.deb ... 236s Unpacking libubsan1:amd64 (15-20250222-0ubuntu1) ... 236s Selecting previously unselected package libhwasan0:amd64. 236s Preparing to unpack .../013-libhwasan0_15-20250222-0ubuntu1_amd64.deb ... 236s Unpacking libhwasan0:amd64 (15-20250222-0ubuntu1) ... 237s Selecting previously unselected package libquadmath0:amd64. 237s Preparing to unpack .../014-libquadmath0_15-20250222-0ubuntu1_amd64.deb ... 237s Unpacking libquadmath0:amd64 (15-20250222-0ubuntu1) ... 237s Selecting previously unselected package libgcc-14-dev:amd64. 237s Preparing to unpack .../015-libgcc-14-dev_14.2.0-17ubuntu3_amd64.deb ... 237s Unpacking libgcc-14-dev:amd64 (14.2.0-17ubuntu3) ... 237s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 237s Preparing to unpack .../016-gcc-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 237s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 237s Selecting previously unselected package gcc-14. 237s Preparing to unpack .../017-gcc-14_14.2.0-17ubuntu3_amd64.deb ... 237s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 237s Selecting previously unselected package gcc-x86-64-linux-gnu. 237s Preparing to unpack .../018-gcc-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 237s Unpacking gcc-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 237s Selecting previously unselected package gcc. 237s Preparing to unpack .../019-gcc_4%3a14.2.0-1ubuntu1_amd64.deb ... 237s Unpacking gcc (4:14.2.0-1ubuntu1) ... 237s Selecting previously unselected package libstdc++-14-dev:amd64. 237s Preparing to unpack .../020-libstdc++-14-dev_14.2.0-17ubuntu3_amd64.deb ... 237s Unpacking libstdc++-14-dev:amd64 (14.2.0-17ubuntu3) ... 237s Selecting previously unselected package g++-14-x86-64-linux-gnu. 237s Preparing to unpack .../021-g++-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 237s Unpacking g++-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 238s Selecting previously unselected package g++-14. 238s Preparing to unpack .../022-g++-14_14.2.0-17ubuntu3_amd64.deb ... 238s Unpacking g++-14 (14.2.0-17ubuntu3) ... 238s Selecting previously unselected package g++-x86-64-linux-gnu. 238s Preparing to unpack .../023-g++-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 238s Unpacking g++-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 238s Selecting previously unselected package g++. 238s Preparing to unpack .../024-g++_4%3a14.2.0-1ubuntu1_amd64.deb ... 238s Unpacking g++ (4:14.2.0-1ubuntu1) ... 238s Selecting previously unselected package build-essential. 238s Preparing to unpack .../025-build-essential_12.10ubuntu1_amd64.deb ... 238s Unpacking build-essential (12.10ubuntu1) ... 238s Selecting previously unselected package dctrl-tools. 238s Preparing to unpack .../026-dctrl-tools_2.24-3build3_amd64.deb ... 238s Unpacking dctrl-tools (2.24-3build3) ... 238s Selecting previously unselected package fonts-dejavu-mono. 238s Preparing to unpack .../027-fonts-dejavu-mono_2.37-8_all.deb ... 238s Unpacking fonts-dejavu-mono (2.37-8) ... 238s Selecting previously unselected package fonts-dejavu-core. 238s Preparing to unpack .../028-fonts-dejavu-core_2.37-8_all.deb ... 238s Unpacking fonts-dejavu-core (2.37-8) ... 238s Selecting previously unselected package fontconfig-config. 238s Preparing to unpack .../029-fontconfig-config_2.15.0-2ubuntu1_amd64.deb ... 238s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 238s Selecting previously unselected package libfontconfig1:amd64. 238s Preparing to unpack .../030-libfontconfig1_2.15.0-2ubuntu1_amd64.deb ... 238s Unpacking libfontconfig1:amd64 (2.15.0-2ubuntu1) ... 238s Selecting previously unselected package fontconfig. 238s Preparing to unpack .../031-fontconfig_2.15.0-2ubuntu1_amd64.deb ... 238s Unpacking fontconfig (2.15.0-2ubuntu1) ... 238s Selecting previously unselected package fonts-font-awesome. 238s Preparing to unpack .../032-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 238s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 238s Selecting previously unselected package fonts-glyphicons-halflings. 238s Preparing to unpack .../033-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 238s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 238s Selecting previously unselected package fonts-mathjax. 238s Preparing to unpack .../034-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 238s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 238s Selecting previously unselected package libgfortran5:amd64. 238s Preparing to unpack .../035-libgfortran5_15-20250222-0ubuntu1_amd64.deb ... 238s Unpacking libgfortran5:amd64 (15-20250222-0ubuntu1) ... 238s Selecting previously unselected package libgfortran-14-dev:amd64. 239s Preparing to unpack .../036-libgfortran-14-dev_14.2.0-17ubuntu3_amd64.deb ... 239s Unpacking libgfortran-14-dev:amd64 (14.2.0-17ubuntu3) ... 239s Selecting previously unselected package gfortran-14-x86-64-linux-gnu. 239s Preparing to unpack .../037-gfortran-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 239s Unpacking gfortran-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 239s Selecting previously unselected package gfortran-14. 239s Preparing to unpack .../038-gfortran-14_14.2.0-17ubuntu3_amd64.deb ... 239s Unpacking gfortran-14 (14.2.0-17ubuntu3) ... 239s Selecting previously unselected package gfortran-x86-64-linux-gnu. 239s Preparing to unpack .../039-gfortran-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 239s Unpacking gfortran-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 239s Selecting previously unselected package gfortran. 239s Preparing to unpack .../040-gfortran_4%3a14.2.0-1ubuntu1_amd64.deb ... 239s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 239s Selecting previously unselected package icu-devtools. 239s Preparing to unpack .../041-icu-devtools_76.1-1ubuntu2_amd64.deb ... 239s Unpacking icu-devtools (76.1-1ubuntu2) ... 239s Selecting previously unselected package javascript-common. 239s Preparing to unpack .../042-javascript-common_12_all.deb ... 239s Unpacking javascript-common (12) ... 239s Selecting previously unselected package libblas3:amd64. 239s Preparing to unpack .../043-libblas3_3.12.1-2_amd64.deb ... 239s Unpacking libblas3:amd64 (3.12.1-2) ... 239s Selecting previously unselected package libblas-dev:amd64. 239s Preparing to unpack .../044-libblas-dev_3.12.1-2_amd64.deb ... 239s Unpacking libblas-dev:amd64 (3.12.1-2) ... 239s Selecting previously unselected package libboost1.83-dev:amd64. 239s Preparing to unpack .../045-libboost1.83-dev_1.83.0-4.1ubuntu2_amd64.deb ... 239s Unpacking libboost1.83-dev:amd64 (1.83.0-4.1ubuntu2) ... 241s Selecting previously unselected package libboost-dev:amd64. 241s Preparing to unpack .../046-libboost-dev_1.83.0.2ubuntu1_amd64.deb ... 241s Unpacking libboost-dev:amd64 (1.83.0.2ubuntu1) ... 241s Selecting previously unselected package libbz2-dev:amd64. 241s Preparing to unpack .../047-libbz2-dev_1.0.8-6_amd64.deb ... 241s Unpacking libbz2-dev:amd64 (1.0.8-6) ... 241s Selecting previously unselected package libpixman-1-0:amd64. 241s Preparing to unpack .../048-libpixman-1-0_0.44.0-3_amd64.deb ... 241s Unpacking libpixman-1-0:amd64 (0.44.0-3) ... 242s Selecting previously unselected package libxcb-render0:amd64. 242s Preparing to unpack .../049-libxcb-render0_1.17.0-2_amd64.deb ... 242s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 242s Selecting previously unselected package libxcb-shm0:amd64. 242s Preparing to unpack .../050-libxcb-shm0_1.17.0-2_amd64.deb ... 242s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 242s Selecting previously unselected package libxrender1:amd64. 242s Preparing to unpack .../051-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 242s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 242s Selecting previously unselected package libcairo2:amd64. 242s Preparing to unpack .../052-libcairo2_1.18.2-2_amd64.deb ... 242s Unpacking libcairo2:amd64 (1.18.2-2) ... 242s Selecting previously unselected package libdatrie1:amd64. 242s Preparing to unpack .../053-libdatrie1_0.2.13-3build1_amd64.deb ... 242s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 242s Selecting previously unselected package libdeflate0:amd64. 242s Preparing to unpack .../054-libdeflate0_1.23-1_amd64.deb ... 242s Unpacking libdeflate0:amd64 (1.23-1) ... 242s Selecting previously unselected package libdeflate-dev:amd64. 242s Preparing to unpack .../055-libdeflate-dev_1.23-1_amd64.deb ... 242s Unpacking libdeflate-dev:amd64 (1.23-1) ... 242s Selecting previously unselected package libgraphite2-3:amd64. 242s Preparing to unpack .../056-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 242s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 242s Selecting previously unselected package libharfbuzz0b:amd64. 242s Preparing to unpack .../057-libharfbuzz0b_10.2.0-1_amd64.deb ... 242s Unpacking libharfbuzz0b:amd64 (10.2.0-1) ... 242s Selecting previously unselected package x11-common. 242s Preparing to unpack .../058-x11-common_1%3a7.7+23ubuntu3_all.deb ... 242s Unpacking x11-common (1:7.7+23ubuntu3) ... 242s Selecting previously unselected package libice6:amd64. 242s Preparing to unpack .../059-libice6_2%3a1.1.1-1_amd64.deb ... 242s Unpacking libice6:amd64 (2:1.1.1-1) ... 242s Selecting previously unselected package libicu-dev:amd64. 242s Preparing to unpack .../060-libicu-dev_76.1-1ubuntu2_amd64.deb ... 242s Unpacking libicu-dev:amd64 (76.1-1ubuntu2) ... 242s Selecting previously unselected package libjpeg-turbo8:amd64. 242s Preparing to unpack .../061-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ... 242s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 242s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 242s Preparing to unpack .../062-libjpeg-turbo8-dev_2.1.5-3ubuntu2_amd64.deb ... 242s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-3ubuntu2) ... 242s Selecting previously unselected package libjpeg8:amd64. 242s Preparing to unpack .../063-libjpeg8_8c-2ubuntu11_amd64.deb ... 242s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 242s Selecting previously unselected package libjpeg8-dev:amd64. 242s Preparing to unpack .../064-libjpeg8-dev_8c-2ubuntu11_amd64.deb ... 242s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu11) ... 242s Selecting previously unselected package libjpeg-dev:amd64. 242s Preparing to unpack .../065-libjpeg-dev_8c-2ubuntu11_amd64.deb ... 242s Unpacking libjpeg-dev:amd64 (8c-2ubuntu11) ... 242s Selecting previously unselected package libjs-bootstrap. 242s Preparing to unpack .../066-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 242s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 242s Selecting previously unselected package libjs-popper.js. 242s Preparing to unpack .../067-libjs-popper.js_1.16.1+ds-6_all.deb ... 242s Unpacking libjs-popper.js (1.16.1+ds-6) ... 242s Selecting previously unselected package libjs-bootstrap4. 242s Preparing to unpack .../068-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 242s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 243s Selecting previously unselected package libjs-d3. 243s Preparing to unpack .../069-libjs-d3_3.5.17-4_all.deb ... 243s Unpacking libjs-d3 (3.5.17-4) ... 243s Selecting previously unselected package libjs-es5-shim. 243s Preparing to unpack .../070-libjs-es5-shim_4.6.7-2_all.deb ... 243s Unpacking libjs-es5-shim (4.6.7-2) ... 243s Selecting previously unselected package libjs-highlight.js. 243s Preparing to unpack .../071-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 243s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 243s Selecting previously unselected package libjs-jquery. 243s Preparing to unpack .../072-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 243s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 243s Selecting previously unselected package libjs-jquery-datatables. 243s Preparing to unpack .../073-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 243s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 243s Selecting previously unselected package libjs-sifter.js. 243s Preparing to unpack .../074-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 243s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 243s Selecting previously unselected package libjs-microplugin.js. 243s Preparing to unpack .../075-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 243s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 243s Selecting previously unselected package libjs-jquery-selectize.js. 243s Preparing to unpack .../076-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 243s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 243s Selecting previously unselected package libjs-jquery-ui. 243s Preparing to unpack .../077-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 243s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 243s Selecting previously unselected package libjs-json. 243s Preparing to unpack .../078-libjs-json_0~20221030+~1.0.8-1_all.deb ... 243s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 243s Selecting previously unselected package libjs-prettify. 243s Preparing to unpack .../079-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 243s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 243s Selecting previously unselected package liblapack3:amd64. 243s Preparing to unpack .../080-liblapack3_3.12.1-2_amd64.deb ... 243s Unpacking liblapack3:amd64 (3.12.1-2) ... 243s Selecting previously unselected package liblapack-dev:amd64. 243s Preparing to unpack .../081-liblapack-dev_3.12.1-2_amd64.deb ... 243s Unpacking liblapack-dev:amd64 (3.12.1-2) ... 243s Selecting previously unselected package liblerc4:amd64. 243s Preparing to unpack .../082-liblerc4_4.0.0+ds-5ubuntu1_amd64.deb ... 243s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 243s Selecting previously unselected package liblua5.4-0:amd64. 243s Preparing to unpack .../083-liblua5.4-0_5.4.7-1_amd64.deb ... 243s Unpacking liblua5.4-0:amd64 (5.4.7-1) ... 243s Selecting previously unselected package libncurses-dev:amd64. 243s Preparing to unpack .../084-libncurses-dev_6.5+20250216-2_amd64.deb ... 243s Unpacking libncurses-dev:amd64 (6.5+20250216-2) ... 243s Selecting previously unselected package libthai-data. 243s Preparing to unpack .../085-libthai-data_0.1.29-2build1_all.deb ... 243s Unpacking libthai-data (0.1.29-2build1) ... 243s Selecting previously unselected package libthai0:amd64. 244s Preparing to unpack .../086-libthai0_0.1.29-2build1_amd64.deb ... 244s Unpacking libthai0:amd64 (0.1.29-2build1) ... 244s Selecting previously unselected package libpango-1.0-0:amd64. 244s Preparing to unpack .../087-libpango-1.0-0_1.56.2-1_amd64.deb ... 244s Unpacking libpango-1.0-0:amd64 (1.56.2-1) ... 244s Selecting previously unselected package libpangoft2-1.0-0:amd64. 244s Preparing to unpack .../088-libpangoft2-1.0-0_1.56.2-1_amd64.deb ... 244s Unpacking libpangoft2-1.0-0:amd64 (1.56.2-1) ... 244s Selecting previously unselected package libpangocairo-1.0-0:amd64. 244s Preparing to unpack .../089-libpangocairo-1.0-0_1.56.2-1_amd64.deb ... 244s Unpacking libpangocairo-1.0-0:amd64 (1.56.2-1) ... 244s Selecting previously unselected package libpaper2:amd64. 244s Preparing to unpack .../090-libpaper2_2.2.5-0.3_amd64.deb ... 244s Unpacking libpaper2:amd64 (2.2.5-0.3) ... 244s Selecting previously unselected package libpaper-utils. 244s Preparing to unpack .../091-libpaper-utils_2.2.5-0.3_amd64.deb ... 244s Unpacking libpaper-utils (2.2.5-0.3) ... 244s Selecting previously unselected package libpcre2-16-0:amd64. 244s Preparing to unpack .../092-libpcre2-16-0_10.45-1_amd64.deb ... 244s Unpacking libpcre2-16-0:amd64 (10.45-1) ... 244s Selecting previously unselected package libpcre2-32-0:amd64. 244s Preparing to unpack .../093-libpcre2-32-0_10.45-1_amd64.deb ... 244s Unpacking libpcre2-32-0:amd64 (10.45-1) ... 244s Selecting previously unselected package libpcre2-posix3:amd64. 244s Preparing to unpack .../094-libpcre2-posix3_10.45-1_amd64.deb ... 244s Unpacking libpcre2-posix3:amd64 (10.45-1) ... 244s Selecting previously unselected package libpcre2-dev:amd64. 244s Preparing to unpack .../095-libpcre2-dev_10.45-1_amd64.deb ... 244s Unpacking libpcre2-dev:amd64 (10.45-1) ... 244s Selecting previously unselected package libpkgconf3:amd64. 244s Preparing to unpack .../096-libpkgconf3_1.8.1-4_amd64.deb ... 244s Unpacking libpkgconf3:amd64 (1.8.1-4) ... 244s Selecting previously unselected package zlib1g-dev:amd64. 244s Preparing to unpack .../097-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ... 244s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 244s Selecting previously unselected package libpng-dev:amd64. 244s Preparing to unpack .../098-libpng-dev_1.6.47-1_amd64.deb ... 244s Unpacking libpng-dev:amd64 (1.6.47-1) ... 244s Selecting previously unselected package libreadline-dev:amd64. 244s Preparing to unpack .../099-libreadline-dev_8.2-6_amd64.deb ... 244s Unpacking libreadline-dev:amd64 (8.2-6) ... 244s Selecting previously unselected package libsharpyuv0:amd64. 244s Preparing to unpack .../100-libsharpyuv0_1.5.0-0.1_amd64.deb ... 244s Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ... 244s Selecting previously unselected package libsm6:amd64. 244s Preparing to unpack .../101-libsm6_2%3a1.2.4-1_amd64.deb ... 244s Unpacking libsm6:amd64 (2:1.2.4-1) ... 244s Selecting previously unselected package libtcl8.6:amd64. 244s Preparing to unpack .../102-libtcl8.6_8.6.16+dfsg-1_amd64.deb ... 244s Unpacking libtcl8.6:amd64 (8.6.16+dfsg-1) ... 244s Selecting previously unselected package libjbig0:amd64. 244s Preparing to unpack .../103-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 244s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 244s Selecting previously unselected package libwebp7:amd64. 244s Preparing to unpack .../104-libwebp7_1.5.0-0.1_amd64.deb ... 244s Unpacking libwebp7:amd64 (1.5.0-0.1) ... 244s Selecting previously unselected package libtiff6:amd64. 244s Preparing to unpack .../105-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ... 244s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 244s Selecting previously unselected package libxft2:amd64. 244s Preparing to unpack .../106-libxft2_2.3.6-1build1_amd64.deb ... 244s Unpacking libxft2:amd64 (2.3.6-1build1) ... 244s Selecting previously unselected package libxss1:amd64. 244s Preparing to unpack .../107-libxss1_1%3a1.2.3-1build3_amd64.deb ... 244s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 244s Selecting previously unselected package libtk8.6:amd64. 244s Preparing to unpack .../108-libtk8.6_8.6.16-1_amd64.deb ... 244s Unpacking libtk8.6:amd64 (8.6.16-1) ... 244s Selecting previously unselected package libxt6t64:amd64. 244s Preparing to unpack .../109-libxt6t64_1%3a1.2.1-1.2build1_amd64.deb ... 244s Unpacking libxt6t64:amd64 (1:1.2.1-1.2build1) ... 245s Selecting previously unselected package zip. 245s Preparing to unpack .../110-zip_3.0-14ubuntu2_amd64.deb ... 245s Unpacking zip (3.0-14ubuntu2) ... 245s Selecting previously unselected package unzip. 245s Preparing to unpack .../111-unzip_6.0-28ubuntu6_amd64.deb ... 245s Unpacking unzip (6.0-28ubuntu6) ... 245s Selecting previously unselected package xdg-utils. 245s Preparing to unpack .../112-xdg-utils_1.2.1-2ubuntu1_all.deb ... 245s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 245s Selecting previously unselected package r-base-core. 245s Preparing to unpack .../113-r-base-core_4.4.3-1_amd64.deb ... 245s Unpacking r-base-core (4.4.3-1) ... 245s Selecting previously unselected package r-cran-littler. 245s Preparing to unpack .../114-r-cran-littler_0.3.20-2_amd64.deb ... 245s Unpacking r-cran-littler (0.3.20-2) ... 245s Selecting previously unselected package littler. 245s Preparing to unpack .../115-littler_0.3.20-2_all.deb ... 245s Unpacking littler (0.3.20-2) ... 245s Selecting previously unselected package node-bootstrap-sass. 245s Preparing to unpack .../116-node-bootstrap-sass_3.4.3-2_all.deb ... 245s Unpacking node-bootstrap-sass (3.4.3-2) ... 245s Selecting previously unselected package node-html5shiv. 245s Preparing to unpack .../117-node-html5shiv_3.7.3+dfsg-5_all.deb ... 245s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 245s Selecting previously unselected package node-normalize.css. 245s Preparing to unpack .../118-node-normalize.css_8.0.1-5_all.deb ... 245s Unpacking node-normalize.css (8.0.1-5) ... 245s Selecting previously unselected package pandoc-data. 245s Preparing to unpack .../119-pandoc-data_3.1.11.1-3build1_all.deb ... 245s Unpacking pandoc-data (3.1.11.1-3build1) ... 245s Selecting previously unselected package pandoc. 245s Preparing to unpack .../120-pandoc_3.1.11.1+ds-2_amd64.deb ... 245s Unpacking pandoc (3.1.11.1+ds-2) ... 246s Selecting previously unselected package liblzma-dev:amd64. 246s Preparing to unpack .../121-liblzma-dev_5.6.4-1_amd64.deb ... 246s Unpacking liblzma-dev:amd64 (5.6.4-1) ... 246s Selecting previously unselected package pkgconf-bin. 246s Preparing to unpack .../122-pkgconf-bin_1.8.1-4_amd64.deb ... 246s Unpacking pkgconf-bin (1.8.1-4) ... 246s Selecting previously unselected package pkgconf:amd64. 246s Preparing to unpack .../123-pkgconf_1.8.1-4_amd64.deb ... 246s Unpacking pkgconf:amd64 (1.8.1-4) ... 246s Selecting previously unselected package libtirpc-dev:amd64. 246s Preparing to unpack .../124-libtirpc-dev_1.3.4+ds-1.3_amd64.deb ... 246s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1.3) ... 246s Selecting previously unselected package r-base-dev. 246s Preparing to unpack .../125-r-base-dev_4.4.3-1_all.deb ... 246s Unpacking r-base-dev (4.4.3-1) ... 246s Selecting previously unselected package pkg-r-autopkgtest. 246s Preparing to unpack .../126-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 246s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 246s Selecting previously unselected package r-bioc-biocgenerics. 246s Preparing to unpack .../127-r-bioc-biocgenerics_0.52.0-2_all.deb ... 246s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 246s Selecting previously unselected package r-bioc-biobase. 246s Preparing to unpack .../128-r-bioc-biobase_2.66.0-2_amd64.deb ... 246s Unpacking r-bioc-biobase (2.66.0-2) ... 246s Selecting previously unselected package r-bioc-s4vectors. 246s Preparing to unpack .../129-r-bioc-s4vectors_0.44.0+dfsg-2_amd64.deb ... 246s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 247s Selecting previously unselected package r-bioc-iranges. 247s Preparing to unpack .../130-r-bioc-iranges_2.40.1-2_amd64.deb ... 247s Unpacking r-bioc-iranges (2.40.1-2) ... 247s Selecting previously unselected package r-cran-dbi. 247s Preparing to unpack .../131-r-cran-dbi_1.2.3-1_all.deb ... 247s Unpacking r-cran-dbi (1.2.3-1) ... 247s Selecting previously unselected package r-cran-bit. 247s Preparing to unpack .../132-r-cran-bit_4.6.0+dfsg-1_amd64.deb ... 247s Unpacking r-cran-bit (4.6.0+dfsg-1) ... 247s Selecting previously unselected package r-cran-bit64. 247s Preparing to unpack .../133-r-cran-bit64_4.6.0-1-1ubuntu2_amd64.deb ... 247s Unpacking r-cran-bit64 (4.6.0-1-1ubuntu2) ... 247s Selecting previously unselected package r-cran-rlang. 247s Preparing to unpack .../134-r-cran-rlang_1.1.5-1_amd64.deb ... 247s Unpacking r-cran-rlang (1.1.5-1) ... 247s Selecting previously unselected package r-cran-cli. 247s Preparing to unpack .../135-r-cran-cli_3.6.4-1_amd64.deb ... 247s Unpacking r-cran-cli (3.6.4-1) ... 247s Selecting previously unselected package r-cran-glue. 247s Preparing to unpack .../136-r-cran-glue_1.8.0-1_amd64.deb ... 247s Unpacking r-cran-glue (1.8.0-1) ... 247s Selecting previously unselected package r-cran-lifecycle. 247s Preparing to unpack .../137-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 247s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 247s Selecting previously unselected package r-cran-vctrs. 247s Preparing to unpack .../138-r-cran-vctrs_0.6.5-1_amd64.deb ... 247s Unpacking r-cran-vctrs (0.6.5-1) ... 247s Selecting previously unselected package r-cran-blob. 247s Preparing to unpack .../139-r-cran-blob_1.2.4-1_all.deb ... 247s Unpacking r-cran-blob (1.2.4-1) ... 247s Selecting previously unselected package r-cran-fastmap. 247s Preparing to unpack .../140-r-cran-fastmap_1.2.0-1_amd64.deb ... 247s Unpacking r-cran-fastmap (1.2.0-1) ... 247s Selecting previously unselected package r-cran-cachem. 247s Preparing to unpack .../141-r-cran-cachem_1.1.0-1_amd64.deb ... 247s Unpacking r-cran-cachem (1.1.0-1) ... 247s Selecting previously unselected package r-cran-memoise. 247s Preparing to unpack .../142-r-cran-memoise_2.0.1-1_all.deb ... 247s Unpacking r-cran-memoise (2.0.1-1) ... 247s Selecting previously unselected package r-cran-pkgconfig. 247s Preparing to unpack .../143-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 247s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 247s Selecting previously unselected package r-cran-plogr. 247s Preparing to unpack .../144-r-cran-plogr_0.2.0-3build1_all.deb ... 247s Unpacking r-cran-plogr (0.2.0-3build1) ... 247s Selecting previously unselected package r-cran-cpp11. 247s Preparing to unpack .../145-r-cran-cpp11_0.5.2-1_all.deb ... 247s Unpacking r-cran-cpp11 (0.5.2-1) ... 247s Selecting previously unselected package r-cran-rsqlite. 247s Preparing to unpack .../146-r-cran-rsqlite_2.3.9-1_amd64.deb ... 247s Unpacking r-cran-rsqlite (2.3.9-1) ... 247s Selecting previously unselected package r-cran-curl. 247s Preparing to unpack .../147-r-cran-curl_6.2.1+dfsg-1ubuntu1_amd64.deb ... 247s Unpacking r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 247s Selecting previously unselected package r-cran-jsonlite. 247s Preparing to unpack .../148-r-cran-jsonlite_1.9.1+dfsg-1_amd64.deb ... 247s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 247s Selecting previously unselected package r-cran-mime. 247s Preparing to unpack .../149-r-cran-mime_0.12-2_amd64.deb ... 247s Unpacking r-cran-mime (0.12-2) ... 247s Selecting previously unselected package r-cran-sys. 247s Preparing to unpack .../150-r-cran-sys_3.4.3-1_amd64.deb ... 247s Unpacking r-cran-sys (3.4.3-1) ... 247s Selecting previously unselected package r-cran-askpass. 247s Preparing to unpack .../151-r-cran-askpass_1.2.1-1_amd64.deb ... 247s Unpacking r-cran-askpass (1.2.1-1) ... 247s Selecting previously unselected package r-cran-openssl. 248s Preparing to unpack .../152-r-cran-openssl_2.3.2+dfsg-1_amd64.deb ... 248s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 248s Selecting previously unselected package r-cran-r6. 248s Preparing to unpack .../153-r-cran-r6_2.6.1-1_all.deb ... 248s Unpacking r-cran-r6 (2.6.1-1) ... 248s Selecting previously unselected package r-cran-httr. 248s Preparing to unpack .../154-r-cran-httr_1.4.7+dfsg-1_all.deb ... 248s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 248s Selecting previously unselected package r-cran-png. 248s Preparing to unpack .../155-r-cran-png_0.1-8-1build2_amd64.deb ... 248s Unpacking r-cran-png (0.1-8-1build2) ... 248s Selecting previously unselected package r-bioc-zlibbioc. 248s Preparing to unpack .../156-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 248s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 248s Selecting previously unselected package r-bioc-xvector. 248s Preparing to unpack .../157-r-bioc-xvector_0.46.0-2_amd64.deb ... 248s Unpacking r-bioc-xvector (0.46.0-2) ... 248s Selecting previously unselected package r-bioc-ucsc.utils. 248s Preparing to unpack .../158-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 248s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 248s Selecting previously unselected package r-bioc-genomeinfodbdata. 248s Preparing to unpack .../159-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 248s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 248s Selecting previously unselected package r-bioc-genomeinfodb. 248s Preparing to unpack .../160-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 248s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 248s Selecting previously unselected package r-cran-crayon. 248s Preparing to unpack .../161-r-cran-crayon_1.5.3-1_all.deb ... 248s Unpacking r-cran-crayon (1.5.3-1) ... 248s Selecting previously unselected package r-bioc-biostrings. 248s Preparing to unpack .../162-r-bioc-biostrings_2.74.1+dfsg-2_amd64.deb ... 248s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 248s Selecting previously unselected package r-bioc-keggrest. 248s Preparing to unpack .../163-r-bioc-keggrest_1.46.0+dfsg-2_all.deb ... 248s Unpacking r-bioc-keggrest (1.46.0+dfsg-2) ... 248s Selecting previously unselected package r-bioc-annotationdbi. 248s Preparing to unpack .../164-r-bioc-annotationdbi_1.68.0-2_all.deb ... 248s Unpacking r-bioc-annotationdbi (1.68.0-2) ... 248s Selecting previously unselected package r-cran-generics. 248s Preparing to unpack .../165-r-cran-generics_0.1.3-1_all.deb ... 248s Unpacking r-cran-generics (0.1.3-1) ... 248s Selecting previously unselected package r-cran-magrittr. 248s Preparing to unpack .../166-r-cran-magrittr_2.0.3-1_amd64.deb ... 248s Unpacking r-cran-magrittr (2.0.3-1) ... 248s Selecting previously unselected package r-cran-utf8. 248s Preparing to unpack .../167-r-cran-utf8_1.2.4-1_amd64.deb ... 248s Unpacking r-cran-utf8 (1.2.4-1) ... 248s Selecting previously unselected package r-cran-pillar. 248s Preparing to unpack .../168-r-cran-pillar_1.10.1+dfsg-1_all.deb ... 248s Unpacking r-cran-pillar (1.10.1+dfsg-1) ... 248s Selecting previously unselected package r-cran-fansi. 248s Preparing to unpack .../169-r-cran-fansi_1.0.5-1_amd64.deb ... 248s Unpacking r-cran-fansi (1.0.5-1) ... 249s Selecting previously unselected package r-cran-tibble. 249s Preparing to unpack .../170-r-cran-tibble_3.2.1+dfsg-3_amd64.deb ... 249s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 249s Selecting previously unselected package r-cran-withr. 249s Preparing to unpack .../171-r-cran-withr_3.0.2+dfsg-1_all.deb ... 249s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 249s Selecting previously unselected package r-cran-tidyselect. 249s Preparing to unpack .../172-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ... 249s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 249s Selecting previously unselected package r-cran-dplyr. 249s Preparing to unpack .../173-r-cran-dplyr_1.1.4-4_amd64.deb ... 249s Unpacking r-cran-dplyr (1.1.4-4) ... 249s Selecting previously unselected package r-cran-purrr. 249s Preparing to unpack .../174-r-cran-purrr_1.0.4-1_amd64.deb ... 249s Unpacking r-cran-purrr (1.0.4-1) ... 249s Selecting previously unselected package r-cran-stringi. 249s Preparing to unpack .../175-r-cran-stringi_1.8.4-1build1_amd64.deb ... 249s Unpacking r-cran-stringi (1.8.4-1build1) ... 249s Selecting previously unselected package r-cran-stringr. 249s Preparing to unpack .../176-r-cran-stringr_1.5.1-1_all.deb ... 249s Unpacking r-cran-stringr (1.5.1-1) ... 249s Selecting previously unselected package r-cran-tidyr. 249s Preparing to unpack .../177-r-cran-tidyr_1.3.1-1_amd64.deb ... 249s Unpacking r-cran-tidyr (1.3.1-1) ... 249s Selecting previously unselected package r-cran-dbplyr. 249s Preparing to unpack .../178-r-cran-dbplyr_2.5.0+dfsg-1_all.deb ... 249s Unpacking r-cran-dbplyr (2.5.0+dfsg-1) ... 249s Selecting previously unselected package r-cran-filelock. 249s Preparing to unpack .../179-r-cran-filelock_1.0.3-1_amd64.deb ... 249s Unpacking r-cran-filelock (1.0.3-1) ... 249s Selecting previously unselected package r-bioc-biocfilecache. 249s Preparing to unpack .../180-r-bioc-biocfilecache_2.14.0+dfsg-2_all.deb ... 249s Unpacking r-bioc-biocfilecache (2.14.0+dfsg-2) ... 249s Selecting previously unselected package r-bioc-biocio. 249s Preparing to unpack .../181-r-bioc-biocio_1.16.0+dfsg-2_all.deb ... 249s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ... 249s Selecting previously unselected package r-cran-formatr. 249s Preparing to unpack .../182-r-cran-formatr_1.14-2_all.deb ... 249s Unpacking r-cran-formatr (1.14-2) ... 249s Selecting previously unselected package r-cran-lambda.r. 249s Preparing to unpack .../183-r-cran-lambda.r_1.2.4-2build1_all.deb ... 249s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 249s Selecting previously unselected package r-cran-futile.options. 249s Preparing to unpack .../184-r-cran-futile.options_1.0.1-3build1_all.deb ... 249s Unpacking r-cran-futile.options (1.0.1-3build1) ... 249s Selecting previously unselected package r-cran-futile.logger. 249s Preparing to unpack .../185-r-cran-futile.logger_1.4.3-4build1_all.deb ... 249s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 249s Selecting previously unselected package r-cran-snow. 249s Preparing to unpack .../186-r-cran-snow_1%3a0.4.4-2_all.deb ... 249s Unpacking r-cran-snow (1:0.4.4-2) ... 249s Selecting previously unselected package r-cran-codetools. 249s Preparing to unpack .../187-r-cran-codetools_0.2-20-1_all.deb ... 249s Unpacking r-cran-codetools (0.2-20-1) ... 249s Selecting previously unselected package r-cran-bh. 249s Preparing to unpack .../188-r-cran-bh_1.84.0-1_all.deb ... 249s Unpacking r-cran-bh (1.84.0-1) ... 249s Selecting previously unselected package r-bioc-biocparallel. 249s Preparing to unpack .../189-r-bioc-biocparallel_1.40.0-2_amd64.deb ... 249s Unpacking r-bioc-biocparallel (1.40.0-2) ... 249s Selecting previously unselected package r-cran-hms. 249s Preparing to unpack .../190-r-cran-hms_1.1.3-1_all.deb ... 249s Unpacking r-cran-hms (1.1.3-1) ... 249s Selecting previously unselected package r-cran-prettyunits. 250s Preparing to unpack .../191-r-cran-prettyunits_1.2.0-1_all.deb ... 250s Unpacking r-cran-prettyunits (1.2.0-1) ... 250s Selecting previously unselected package r-cran-progress. 250s Preparing to unpack .../192-r-cran-progress_1.2.3-1_all.deb ... 250s Unpacking r-cran-progress (1.2.3-1) ... 250s Selecting previously unselected package r-cran-rappdirs. 250s Preparing to unpack .../193-r-cran-rappdirs_0.3.3-1_amd64.deb ... 250s Unpacking r-cran-rappdirs (0.3.3-1) ... 250s Selecting previously unselected package r-cran-httr2. 250s Preparing to unpack .../194-r-cran-httr2_1.1.1-1_all.deb ... 250s Unpacking r-cran-httr2 (1.1.1-1) ... 250s Selecting previously unselected package r-cran-digest. 250s Preparing to unpack .../195-r-cran-digest_0.6.37-1_amd64.deb ... 250s Unpacking r-cran-digest (0.6.37-1) ... 250s Selecting previously unselected package r-cran-xml2. 250s Preparing to unpack .../196-r-cran-xml2_1.3.7-1_amd64.deb ... 250s Unpacking r-cran-xml2 (1.3.7-1) ... 250s Selecting previously unselected package r-bioc-biomart. 250s Preparing to unpack .../197-r-bioc-biomart_2.62.1+dfsg-1_all.deb ... 250s Unpacking r-bioc-biomart (2.62.1+dfsg-1) ... 250s Selecting previously unselected package r-cran-pkgkitten. 250s Preparing to unpack .../198-r-cran-pkgkitten_0.2.4-1_all.deb ... 250s Unpacking r-cran-pkgkitten (0.2.4-1) ... 250s Selecting previously unselected package r-cran-rcpp. 250s Preparing to unpack .../199-r-cran-rcpp_1.0.14-1_amd64.deb ... 250s Unpacking r-cran-rcpp (1.0.14-1) ... 250s Selecting previously unselected package r-bioc-genomicranges. 250s Preparing to unpack .../200-r-bioc-genomicranges_1.58.0+dfsg-2_amd64.deb ... 250s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 250s Selecting previously unselected package r-cran-xml. 250s Preparing to unpack .../201-r-cran-xml_3.99-0.18-1_amd64.deb ... 250s Unpacking r-cran-xml (3.99-0.18-1) ... 250s Selecting previously unselected package r-cran-bitops. 250s Preparing to unpack .../202-r-cran-bitops_1.0-9-1_amd64.deb ... 250s Unpacking r-cran-bitops (1.0-9-1) ... 250s Selecting previously unselected package r-bioc-rhtslib. 250s Preparing to unpack .../203-r-bioc-rhtslib_3.2.0+dfsg-2_amd64.deb ... 250s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 250s Selecting previously unselected package r-bioc-rsamtools. 250s Preparing to unpack .../204-r-bioc-rsamtools_2.22.0+dfsg-2_amd64.deb ... 250s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 250s Selecting previously unselected package r-cran-matrixstats. 250s Preparing to unpack .../205-r-cran-matrixstats_1.5.0-1_amd64.deb ... 250s Unpacking r-cran-matrixstats (1.5.0-1) ... 250s Selecting previously unselected package r-bioc-matrixgenerics. 251s Preparing to unpack .../206-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 251s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 251s Selecting previously unselected package r-cran-lattice. 251s Preparing to unpack .../207-r-cran-lattice_0.22-6-1_amd64.deb ... 251s Unpacking r-cran-lattice (0.22-6-1) ... 251s Selecting previously unselected package r-cran-matrix. 251s Preparing to unpack .../208-r-cran-matrix_1.7-3-1_amd64.deb ... 251s Unpacking r-cran-matrix (1.7-3-1) ... 251s Selecting previously unselected package r-cran-abind. 251s Preparing to unpack .../209-r-cran-abind_1.4-8-1_all.deb ... 251s Unpacking r-cran-abind (1.4-8-1) ... 251s Selecting previously unselected package r-bioc-s4arrays. 251s Preparing to unpack .../210-r-bioc-s4arrays_1.6.0+dfsg-2_amd64.deb ... 251s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 251s Selecting previously unselected package r-bioc-sparsearray. 251s Preparing to unpack .../211-r-bioc-sparsearray_1.6.2+dfsg-1_amd64.deb ... 251s Unpacking r-bioc-sparsearray (1.6.2+dfsg-1) ... 251s Selecting previously unselected package r-bioc-delayedarray. 251s Preparing to unpack .../212-r-bioc-delayedarray_0.32.0+dfsg-2_amd64.deb ... 251s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 251s Selecting previously unselected package r-bioc-summarizedexperiment. 251s Preparing to unpack .../213-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 251s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 251s Selecting previously unselected package r-bioc-genomicalignments. 251s Preparing to unpack .../214-r-bioc-genomicalignments_1.42.0-2_amd64.deb ... 251s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 251s Selecting previously unselected package r-cran-rcurl. 251s Preparing to unpack .../215-r-cran-rcurl_1.98-1.16+dfsg-1_amd64.deb ... 251s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 251s Selecting previously unselected package r-cran-rjson. 251s Preparing to unpack .../216-r-cran-rjson_0.2.23-1_amd64.deb ... 251s Unpacking r-cran-rjson (0.2.23-1) ... 251s Selecting previously unselected package r-cran-yaml. 251s Preparing to unpack .../217-r-cran-yaml_2.3.10-1_amd64.deb ... 251s Unpacking r-cran-yaml (2.3.10-1) ... 251s Selecting previously unselected package r-cran-restfulr. 251s Preparing to unpack .../218-r-cran-restfulr_0.0.15-1_amd64.deb ... 251s Unpacking r-cran-restfulr (0.0.15-1) ... 251s Selecting previously unselected package r-bioc-rtracklayer. 251s Preparing to unpack .../219-r-bioc-rtracklayer_1.66.0-2_amd64.deb ... 251s Unpacking r-bioc-rtracklayer (1.66.0-2) ... 251s Selecting previously unselected package r-bioc-genomicfeatures. 251s Preparing to unpack .../220-r-bioc-genomicfeatures_1.58.0+dfsg-2_all.deb ... 251s Unpacking r-bioc-genomicfeatures (1.58.0+dfsg-2) ... 251s Selecting previously unselected package r-bioc-txdbmaker. 251s Preparing to unpack .../221-r-bioc-txdbmaker_1.2.1+ds-2_all.deb ... 251s Unpacking r-bioc-txdbmaker (1.2.1+ds-2) ... 251s Selecting previously unselected package r-cran-iterators. 251s Preparing to unpack .../222-r-cran-iterators_1.0.14-1_all.deb ... 251s Unpacking r-cran-iterators (1.0.14-1) ... 251s Selecting previously unselected package r-cran-foreach. 251s Preparing to unpack .../223-r-cran-foreach_1.5.2-1_all.deb ... 251s Unpacking r-cran-foreach (1.5.2-1) ... 251s Selecting previously unselected package r-cran-doparallel. 251s Preparing to unpack .../224-r-cran-doparallel_1.0.17-1_all.deb ... 251s Unpacking r-cran-doparallel (1.0.17-1) ... 252s Selecting previously unselected package r-cran-gtable. 252s Preparing to unpack .../225-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 252s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 252s Selecting previously unselected package r-cran-isoband. 252s Preparing to unpack .../226-r-cran-isoband_0.2.7-1_amd64.deb ... 252s Unpacking r-cran-isoband (0.2.7-1) ... 252s Selecting previously unselected package r-cran-mass. 252s Preparing to unpack .../227-r-cran-mass_7.3-64-1_amd64.deb ... 252s Unpacking r-cran-mass (7.3-64-1) ... 252s Selecting previously unselected package r-cran-nlme. 252s Preparing to unpack .../228-r-cran-nlme_3.1.167-1_amd64.deb ... 252s Unpacking r-cran-nlme (3.1.167-1) ... 252s Selecting previously unselected package r-cran-mgcv. 252s Preparing to unpack .../229-r-cran-mgcv_1.9-1-1_amd64.deb ... 252s Unpacking r-cran-mgcv (1.9-1-1) ... 252s Selecting previously unselected package r-cran-farver. 252s Preparing to unpack .../230-r-cran-farver_2.1.2-1_amd64.deb ... 252s Unpacking r-cran-farver (2.1.2-1) ... 252s Selecting previously unselected package r-cran-labeling. 252s Preparing to unpack .../231-r-cran-labeling_0.4.3-1_all.deb ... 252s Unpacking r-cran-labeling (0.4.3-1) ... 252s Selecting previously unselected package r-cran-colorspace. 252s Preparing to unpack .../232-r-cran-colorspace_2.1-1+dfsg-1_amd64.deb ... 252s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 252s Selecting previously unselected package r-cran-munsell. 252s Preparing to unpack .../233-r-cran-munsell_0.5.1-1_all.deb ... 252s Unpacking r-cran-munsell (0.5.1-1) ... 252s Selecting previously unselected package r-cran-rcolorbrewer. 252s Preparing to unpack .../234-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 252s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 252s Selecting previously unselected package r-cran-viridislite. 252s Preparing to unpack .../235-r-cran-viridislite_0.4.2-2_all.deb ... 252s Unpacking r-cran-viridislite (0.4.2-2) ... 252s Selecting previously unselected package r-cran-scales. 252s Preparing to unpack .../236-r-cran-scales_1.3.0-1_all.deb ... 252s Unpacking r-cran-scales (1.3.0-1) ... 252s Selecting previously unselected package r-cran-ggplot2. 252s Preparing to unpack .../237-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 252s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 252s Selecting previously unselected package r-cran-base64enc. 252s Preparing to unpack .../238-r-cran-base64enc_0.1-3-3_amd64.deb ... 252s Unpacking r-cran-base64enc (0.1-3-3) ... 252s Selecting previously unselected package r-cran-htmltools. 252s Preparing to unpack .../239-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 252s Unpacking r-cran-htmltools (0.5.8.1-1) ... 252s Selecting previously unselected package r-cran-evaluate. 252s Preparing to unpack .../240-r-cran-evaluate_1.0.3-1_all.deb ... 252s Unpacking r-cran-evaluate (1.0.3-1) ... 252s Selecting previously unselected package r-cran-xfun. 252s Preparing to unpack .../241-r-cran-xfun_0.51+dfsg-1_amd64.deb ... 252s Unpacking r-cran-xfun (0.51+dfsg-1) ... 252s Selecting previously unselected package r-cran-highr. 252s Preparing to unpack .../242-r-cran-highr_0.11+dfsg-1_all.deb ... 252s Unpacking r-cran-highr (0.11+dfsg-1) ... 252s Selecting previously unselected package libjs-mathjax. 253s Preparing to unpack .../243-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 253s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 253s Selecting previously unselected package r-cran-knitr. 253s Preparing to unpack .../244-r-cran-knitr_1.49+dfsg-1_all.deb ... 253s Unpacking r-cran-knitr (1.49+dfsg-1) ... 253s Selecting previously unselected package r-cran-jquerylib. 253s Preparing to unpack .../245-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 253s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 253s Selecting previously unselected package r-cran-fs. 253s Preparing to unpack .../246-r-cran-fs_1.6.5+dfsg-1_amd64.deb ... 253s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 253s Selecting previously unselected package r-cran-sass. 253s Preparing to unpack .../247-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 253s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 253s Selecting previously unselected package r-cran-bslib. 253s Preparing to unpack .../248-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 253s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 254s Selecting previously unselected package r-cran-fontawesome. 254s Preparing to unpack .../249-r-cran-fontawesome_0.5.3-1_all.deb ... 254s Unpacking r-cran-fontawesome (0.5.3-1) ... 254s Selecting previously unselected package r-cran-tinytex. 254s Preparing to unpack .../250-r-cran-tinytex_0.56-1_all.deb ... 254s Unpacking r-cran-tinytex (0.56-1) ... 254s Selecting previously unselected package libjs-modernizr. 254s Preparing to unpack .../251-libjs-modernizr_3.13.0-0.1_all.deb ... 254s Unpacking libjs-modernizr (3.13.0-0.1) ... 254s Selecting previously unselected package r-cran-later. 254s Preparing to unpack .../252-r-cran-later_1.4.1+dfsg-1_amd64.deb ... 254s Unpacking r-cran-later (1.4.1+dfsg-1) ... 254s Selecting previously unselected package r-cran-promises. 254s Preparing to unpack .../253-r-cran-promises_1.3.2+dfsg-1_amd64.deb ... 254s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 254s Selecting previously unselected package r-cran-httpuv. 254s Preparing to unpack .../254-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 254s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 254s Selecting previously unselected package r-cran-xtable. 254s Preparing to unpack .../255-r-cran-xtable_1%3a1.8-4-2_all.deb ... 254s Unpacking r-cran-xtable (1:1.8-4-2) ... 254s Selecting previously unselected package r-cran-sourcetools. 254s Preparing to unpack .../256-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 254s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 254s Selecting previously unselected package r-cran-commonmark. 254s Preparing to unpack .../257-r-cran-commonmark_1.9.2-2_amd64.deb ... 254s Unpacking r-cran-commonmark (1.9.2-2) ... 254s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 254s Preparing to unpack .../258-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 254s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 254s Selecting previously unselected package r-cran-shiny. 254s Preparing to unpack .../259-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 254s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 254s Selecting previously unselected package r-cran-rmarkdown. 254s Preparing to unpack .../260-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 254s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 254s Selecting previously unselected package r-cran-htmlwidgets. 254s Preparing to unpack .../261-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 254s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 254s Selecting previously unselected package r-cran-lazyeval. 254s Preparing to unpack .../262-r-cran-lazyeval_0.2.2-1build1_amd64.deb ... 254s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 254s Selecting previously unselected package r-cran-crosstalk. 254s Preparing to unpack .../263-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 254s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 254s Selecting previously unselected package r-cran-data.table. 254s Preparing to unpack .../264-r-cran-data.table_1.17.0+dfsg-1_amd64.deb ... 254s Unpacking r-cran-data.table (1.17.0+dfsg-1) ... 255s Selecting previously unselected package r-cran-miniui. 255s Preparing to unpack .../265-r-cran-miniui_0.1.1.1-3build1_all.deb ... 255s Unpacking r-cran-miniui (0.1.1.1-3build1) ... 255s Selecting previously unselected package r-cran-shinyjs. 255s Preparing to unpack .../266-r-cran-shinyjs_2.1.0-1_all.deb ... 255s Unpacking r-cran-shinyjs (2.1.0-1) ... 255s Selecting previously unselected package r-cran-colourpicker. 255s Preparing to unpack .../267-r-cran-colourpicker_1.3.0+dfsg-1_all.deb ... 255s Unpacking r-cran-colourpicker (1.3.0+dfsg-1) ... 255s Selecting previously unselected package r-cran-plotly. 255s Preparing to unpack .../268-r-cran-plotly_4.10.4+dfsg-2_all.deb ... 255s Unpacking r-cran-plotly (4.10.4+dfsg-2) ... 255s Selecting previously unselected package r-cran-gridextra. 255s Preparing to unpack .../269-r-cran-gridextra_2.3-3build1_all.deb ... 255s Unpacking r-cran-gridextra (2.3-3build1) ... 255s Selecting previously unselected package r-cran-viridis. 255s Preparing to unpack .../270-r-cran-viridis_0.6.5-1_all.deb ... 255s Unpacking r-cran-viridis (0.6.5-1) ... 255s Selecting previously unselected package r-cran-dendextend. 255s Preparing to unpack .../271-r-cran-dendextend_1.18.1+dfsg-1_all.deb ... 255s Unpacking r-cran-dendextend (1.18.1+dfsg-1) ... 255s Selecting previously unselected package r-cran-plyr. 255s Preparing to unpack .../272-r-cran-plyr_1.8.9-1_amd64.deb ... 255s Unpacking r-cran-plyr (1.8.9-1) ... 255s Selecting previously unselected package r-cran-reshape2. 255s Preparing to unpack .../273-r-cran-reshape2_1.4.4-2build1_amd64.deb ... 255s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 255s Selecting previously unselected package r-cran-ca. 255s Preparing to unpack .../274-r-cran-ca_0.71.1-2build1_all.deb ... 255s Unpacking r-cran-ca (0.71.1-2build1) ... 255s Selecting previously unselected package r-cran-cluster. 255s Preparing to unpack .../275-r-cran-cluster_2.1.8.1-1_amd64.deb ... 255s Unpacking r-cran-cluster (2.1.8.1-1) ... 255s Selecting previously unselected package r-cran-gclus. 255s Preparing to unpack .../276-r-cran-gclus_1.3.2-2build1_all.deb ... 255s Unpacking r-cran-gclus (1.3.2-2build1) ... 255s Selecting previously unselected package r-cran-qap. 255s Preparing to unpack .../277-r-cran-qap_0.1-2-1_amd64.deb ... 255s Unpacking r-cran-qap (0.1-2-1) ... 255s Selecting previously unselected package r-cran-registry. 255s Preparing to unpack .../278-r-cran-registry_0.5-1-2build1_all.deb ... 255s Unpacking r-cran-registry (0.5-1-2build1) ... 255s Selecting previously unselected package r-cran-tsp. 256s Preparing to unpack .../279-r-cran-tsp_1.2-4-1_amd64.deb ... 256s Unpacking r-cran-tsp (1.2-4-1) ... 256s Selecting previously unselected package r-cran-permute. 256s Preparing to unpack .../280-r-cran-permute_0.9-7-1_all.deb ... 256s Unpacking r-cran-permute (0.9-7-1) ... 256s Selecting previously unselected package r-cran-vegan. 256s Preparing to unpack .../281-r-cran-vegan_2.6-10+dfsg-1ubuntu2_amd64.deb ... 256s Unpacking r-cran-vegan (2.6-10+dfsg-1ubuntu2) ... 256s Selecting previously unselected package r-cran-seriation. 256s Preparing to unpack .../282-r-cran-seriation_1.5.7-1_amd64.deb ... 256s Unpacking r-cran-seriation (1.5.7-1) ... 256s Selecting previously unselected package r-cran-ps. 256s Preparing to unpack .../283-r-cran-ps_1.9.0-1_amd64.deb ... 256s Unpacking r-cran-ps (1.9.0-1) ... 256s Selecting previously unselected package r-cran-processx. 256s Preparing to unpack .../284-r-cran-processx_3.8.6-1_amd64.deb ... 256s Unpacking r-cran-processx (3.8.6-1) ... 256s Selecting previously unselected package r-cran-callr. 256s Preparing to unpack .../285-r-cran-callr_3.7.6-1_all.deb ... 256s Unpacking r-cran-callr (3.7.6-1) ... 256s Selecting previously unselected package r-cran-webshot. 256s Preparing to unpack .../286-r-cran-webshot_0.5.5-1_all.deb ... 256s Unpacking r-cran-webshot (0.5.5-1) ... 256s Selecting previously unselected package r-cran-assertthat. 256s Preparing to unpack .../287-r-cran-assertthat_0.2.1-2build1_all.deb ... 256s Unpacking r-cran-assertthat (0.2.1-2build1) ... 256s Selecting previously unselected package r-cran-egg. 256s Preparing to unpack .../288-r-cran-egg_0.4.5-3build1_all.deb ... 256s Unpacking r-cran-egg (0.4.5-3build1) ... 256s Selecting previously unselected package r-cran-heatmaply. 256s Preparing to unpack .../289-r-cran-heatmaply_1.5.0+dfsg-1_all.deb ... 256s Unpacking r-cran-heatmaply (1.5.0+dfsg-1) ... 256s Selecting previously unselected package r-cran-rcpparmadillo. 256s Preparing to unpack .../290-r-cran-rcpparmadillo_14.2.3-1-1_amd64.deb ... 256s Unpacking r-cran-rcpparmadillo (14.2.3-1-1) ... 256s Selecting previously unselected package r-bioc-degnorm. 256s Preparing to unpack .../291-r-bioc-degnorm_1.16.0+ds-2_amd64.deb ... 256s Unpacking r-bioc-degnorm (1.16.0+ds-2) ... 256s Setting up libjs-json (0~20221030+~1.0.8-1) ... 256s Setting up javascript-common (12) ... 256s Setting up libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 256s Setting up libpixman-1-0:amd64 (0.44.0-3) ... 256s Setting up libsharpyuv0:amd64 (1.5.0-0.1) ... 256s Setting up libncurses-dev:amd64 (6.5+20250216-2) ... 256s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 256s Setting up liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 256s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 256s Setting up libxrender1:amd64 (1:0.9.10-1.1build1) ... 256s Setting up libdatrie1:amd64 (0.2.13-3build1) ... 256s Setting up libjs-popper.js (1.16.1+ds-6) ... 256s Setting up libxcb-render0:amd64 (1.17.0-2) ... 256s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 256s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 256s Setting up unzip (6.0-28ubuntu6) ... 256s Setting up x11-common (1:7.7+23ubuntu3) ... 257s Setting up node-html5shiv (3.7.3+dfsg-5) ... 257s Setting up libdeflate0:amd64 (1.23-1) ... 257s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 257s Setting up libxcb-shm0:amd64 (1.17.0-2) ... 257s Setting up libreadline-dev:amd64 (8.2-6) ... 257s Setting up libgomp1:amd64 (15-20250222-0ubuntu1) ... 257s Setting up libjs-modernizr (3.13.0-0.1) ... 257s Setting up libjbig0:amd64 (2.1-6.1ubuntu2) ... 257s Setting up libpcre2-16-0:amd64 (10.45-1) ... 257s Setting up libjs-es5-shim (4.6.7-2) ... 257s Setting up zip (3.0-14ubuntu2) ... 257s Setting up libpcre2-32-0:amd64 (10.45-1) ... 257s Setting up libblas3:amd64 (3.12.1-2) ... 257s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 257s Setting up libtirpc-dev:amd64 (1.3.4+ds-1.3) ... 257s Setting up libpkgconf3:amd64 (1.8.1-4) ... 257s Setting up libquadmath0:amd64 (15-20250222-0ubuntu1) ... 257s Setting up libjs-d3 (3.5.17-4) ... 257s Setting up fonts-dejavu-mono (2.37-8) ... 257s Setting up libmpc3:amd64 (1.3.1-1build2) ... 257s Setting up libtcl8.6:amd64 (8.6.16+dfsg-1) ... 257s Setting up icu-devtools (76.1-1ubuntu2) ... 257s Setting up fonts-dejavu-core (2.37-8) ... 257s Setting up pkgconf-bin (1.8.1-4) ... 257s Setting up libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 257s Setting up libgfortran5:amd64 (15-20250222-0ubuntu1) ... 257s Setting up libwebp7:amd64 (1.5.0-0.1) ... 257s Setting up liblzma-dev:amd64 (5.6.4-1) ... 257s Setting up libubsan1:amd64 (15-20250222-0ubuntu1) ... 257s Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 257s Setting up libpcre2-posix3:amd64 (10.45-1) ... 257s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... 257s Setting up libhwasan0:amd64 (15-20250222-0ubuntu1) ... 257s Setting up libasan8:amd64 (15-20250222-0ubuntu1) ... 257s Setting up liblua5.4-0:amd64 (5.4.7-1) ... 257s Setting up libharfbuzz0b:amd64 (10.2.0-1) ... 257s Setting up libthai-data (0.1.29-2build1) ... 257s Setting up node-bootstrap-sass (3.4.3-2) ... 257s Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... 257s Setting up libxss1:amd64 (1:1.2.3-1build3) ... 257s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... 257s Setting up libpaper2:amd64 (2.2.5-0.3) ... 257s Setting up pandoc-data (3.1.11.1-3build1) ... 257s Setting up libtsan2:amd64 (15-20250222-0ubuntu1) ... 257s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 257s Setting up libisl23:amd64 (0.27-1) ... 257s Setting up libdeflate-dev:amd64 (1.23-1) ... 257s Setting up node-normalize.css (8.0.1-5) ... 257s Setting up libicu-dev:amd64 (76.1-1ubuntu2) ... 257s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 257s Setting up xdg-utils (1.2.1-2ubuntu1) ... 257s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 257s Setting up libcc1-0:amd64 (15-20250222-0ubuntu1) ... 257s Setting up liblsan0:amd64 (15-20250222-0ubuntu1) ... 257s Setting up libblas-dev:amd64 (3.12.1-2) ... 257s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode 257s Setting up dctrl-tools (2.24-3build3) ... 257s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 257s Setting up libitm1:amd64 (15-20250222-0ubuntu1) ... 257s Setting up libbz2-dev:amd64 (1.0.8-6) ... 257s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 257s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 257s Setting up libice6:amd64 (2:1.1.1-1) ... 257s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-3ubuntu2) ... 257s Setting up liblapack3:amd64 (3.12.1-2) ... 257s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 257s Setting up libpcre2-dev:amd64 (10.45-1) ... 257s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 257s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 257s Setting up libpng-dev:amd64 (1.6.47-1) ... 257s Setting up libpaper-utils (2.2.5-0.3) ... 257s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 257s Setting up pkgconf:amd64 (1.8.1-4) ... 257s Setting up libthai0:amd64 (0.1.29-2build1) ... 257s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 257s Setting up pandoc (3.1.11.1+ds-2) ... 257s Setting up liblapack-dev:amd64 (3.12.1-2) ... 257s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode 257s Setting up cpp-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 257s Setting up cpp-14 (14.2.0-17ubuntu3) ... 257s Setting up libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 257s Setting up libfontconfig1:amd64 (2.15.0-2ubuntu1) ... 257s Setting up libgcc-14-dev:amd64 (14.2.0-17ubuntu3) ... 257s Setting up libjpeg8-dev:amd64 (8c-2ubuntu11) ... 257s Setting up libstdc++-14-dev:amd64 (14.2.0-17ubuntu3) ... 257s Setting up libsm6:amd64 (2:1.2.4-1) ... 257s Setting up cpp-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 257s Setting up libgfortran-14-dev:amd64 (14.2.0-17ubuntu3) ... 257s Setting up fontconfig (2.15.0-2ubuntu1) ... 259s Regenerating fonts cache... done. 259s Setting up libxft2:amd64 (2.3.6-1build1) ... 259s Setting up libboost1.83-dev:amd64 (1.83.0-4.1ubuntu2) ... 259s Setting up libtk8.6:amd64 (8.6.16-1) ... 259s Setting up libpango-1.0-0:amd64 (1.56.2-1) ... 259s Setting up libjpeg-dev:amd64 (8c-2ubuntu11) ... 259s Setting up libcairo2:amd64 (1.18.2-2) ... 259s Setting up libxt6t64:amd64 (1:1.2.1-1.2build1) ... 259s Setting up cpp (4:14.2.0-1ubuntu1) ... 259s Setting up libboost-dev:amd64 (1.83.0.2ubuntu1) ... 259s Setting up gcc-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 259s Setting up libpangoft2-1.0-0:amd64 (1.56.2-1) ... 259s Setting up libpangocairo-1.0-0:amd64 (1.56.2-1) ... 259s Setting up gcc-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 259s Setting up gcc-14 (14.2.0-17ubuntu3) ... 259s Setting up gfortran-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 259s Setting up r-base-core (4.4.3-1) ... 260s Creating config file /etc/R/Renviron with new version 260s Setting up r-cran-crayon (1.5.3-1) ... 260s Setting up r-cran-labeling (0.4.3-1) ... 260s Setting up r-cran-sourcetools (0.1.7-1-1) ... 260s Setting up r-cran-futile.options (1.0.1-3build1) ... 260s Setting up r-cran-lattice (0.22-6-1) ... 260s Setting up r-cran-ps (1.9.0-1) ... 260s Setting up r-cran-nlme (3.1.167-1) ... 260s Setting up r-cran-farver (2.1.2-1) ... 260s Setting up g++-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 260s Setting up r-cran-formatr (1.14-2) ... 260s Setting up r-cran-xml (3.99-0.18-1) ... 260s Setting up r-cran-viridislite (0.4.2-2) ... 260s Setting up r-cran-cluster (2.1.8.1-1) ... 260s Setting up g++-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 260s Setting up r-cran-lazyeval (0.2.2-1build1) ... 260s Setting up r-cran-commonmark (1.9.2-2) ... 260s Setting up g++-14 (14.2.0-17ubuntu3) ... 260s Setting up r-cran-rjson (0.2.23-1) ... 260s Setting up r-cran-r6 (2.6.1-1) ... 260s Setting up r-cran-pkgkitten (0.2.4-1) ... 260s Setting up gfortran-14 (14.2.0-17ubuntu3) ... 260s Setting up r-cran-ca (0.71.1-2build1) ... 260s Setting up r-cran-magrittr (2.0.3-1) ... 260s Setting up r-cran-rappdirs (0.3.3-1) ... 260s Setting up r-cran-filelock (1.0.3-1) ... 260s Setting up r-bioc-genomeinfodbdata (1.2.13-2) ... 260s Setting up r-cran-registry (0.5-1-2build1) ... 260s Setting up r-cran-littler (0.3.20-2) ... 260s Setting up r-cran-permute (0.9-7-1) ... 260s Setting up r-cran-bh (1.84.0-1) ... 260s Setting up r-cran-fs (1.6.5+dfsg-1) ... 260s Setting up r-cran-rcpp (1.0.14-1) ... 260s Setting up r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 260s Setting up r-cran-codetools (0.2-20-1) ... 260s Setting up r-bioc-biocgenerics (0.52.0-2) ... 260s Setting up r-cran-rlang (1.1.5-1) ... 260s Setting up r-cran-matrixstats (1.5.0-1) ... 260s Setting up r-cran-assertthat (0.2.1-2build1) ... 260s Setting up littler (0.3.20-2) ... 260s Setting up r-bioc-matrixgenerics (1.18.1-1) ... 260s Setting up r-cran-xfun (0.51+dfsg-1) ... 260s Setting up r-cran-sys (3.4.3-1) ... 260s Setting up r-cran-gclus (1.3.2-2build1) ... 260s Setting up r-cran-plogr (0.2.0-3build1) ... 260s Setting up r-cran-withr (3.0.2+dfsg-1) ... 260s Setting up r-cran-processx (3.8.6-1) ... 260s Setting up r-cran-mime (0.12-2) ... 260s Setting up r-cran-qap (0.1-2-1) ... 260s Setting up r-cran-generics (0.1.3-1) ... 260s Setting up r-cran-base64enc (0.1-3-3) ... 260s Setting up r-cran-iterators (1.0.14-1) ... 260s Setting up r-cran-abind (1.4-8-1) ... 260s Setting up r-cran-digest (0.6.37-1) ... 260s Setting up r-cran-yaml (2.3.10-1) ... 260s Setting up r-cran-lambda.r (1.2.4-2build1) ... 260s Setting up r-cran-evaluate (1.0.3-1) ... 260s Setting up r-cran-dbi (1.2.3-1) ... 260s Setting up r-cran-highr (0.11+dfsg-1) ... 260s Setting up r-cran-foreach (1.5.2-1) ... 260s Setting up r-cran-prettyunits (1.2.0-1) ... 260s Setting up r-cran-fansi (1.0.5-1) ... 260s Setting up r-cran-mass (7.3-64-1) ... 260s Setting up r-cran-snow (1:0.4.4-2) ... 260s Setting up r-cran-data.table (1.17.0+dfsg-1) ... 260s Setting up r-cran-glue (1.8.0-1) ... 260s Setting up r-cran-bit (4.6.0+dfsg-1) ... 260s Setting up gfortran-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 260s Setting up r-cran-xtable (1:1.8-4-2) ... 260s Setting up r-cran-cli (3.6.4-1) ... 260s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 260s Setting up r-cran-bitops (1.0-9-1) ... 260s Setting up r-cran-bit64 (4.6.0-1-1ubuntu2) ... 260s Setting up gcc (4:14.2.0-1ubuntu1) ... 260s Setting up r-bioc-zlibbioc (1.52.0+dfsg-2) ... 260s Setting up r-cran-askpass (1.2.1-1) ... 260s Setting up r-cran-fastmap (1.2.0-1) ... 260s Setting up r-cran-png (0.1-8-1build2) ... 260s Setting up r-bioc-biobase (2.66.0-2) ... 260s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ... 260s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 260s Setting up r-cran-utf8 (1.2.4-1) ... 260s Setting up r-cran-colorspace (2.1-1+dfsg-1) ... 260s Setting up r-cran-stringi (1.8.4-1build1) ... 260s Setting up r-cran-cpp11 (0.5.2-1) ... 260s Setting up r-cran-plyr (1.8.9-1) ... 260s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 260s Setting up r-bioc-s4vectors (0.44.0+dfsg-2) ... 260s Setting up r-cran-isoband (0.2.7-1) ... 260s Setting up r-cran-futile.logger (1.4.3-4build1) ... 260s Setting up r-cran-gtable (0.3.6+dfsg-1) ... 260s Setting up r-cran-later (1.4.1+dfsg-1) ... 260s Setting up r-cran-matrix (1.7-3-1) ... 260s Setting up r-cran-doparallel (1.0.17-1) ... 260s Setting up r-cran-htmltools (0.5.8.1-1) ... 260s Setting up r-cran-tinytex (0.56-1) ... 260s Setting up r-cran-knitr (1.49+dfsg-1) ... 260s Setting up r-cran-mgcv (1.9-1-1) ... 260s Setting up g++ (4:14.2.0-1ubuntu1) ... 260s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 260s Setting up r-cran-cachem (1.1.0-1) ... 260s Setting up r-cran-sass (0.4.9+dfsg-1) ... 260s Setting up build-essential (12.10ubuntu1) ... 260s Setting up r-cran-rcpparmadillo (14.2.3-1-1) ... 260s Setting up r-bioc-iranges (2.40.1-2) ... 260s Setting up r-cran-tsp (1.2-4-1) ... 260s Setting up r-cran-rcurl (1.98-1.16+dfsg-1) ... 260s Setting up r-cran-restfulr (0.0.15-1) ... 260s Setting up r-cran-vctrs (0.6.5-1) ... 260s Setting up r-cran-pillar (1.10.1+dfsg-1) ... 260s Setting up r-cran-openssl (2.3.2+dfsg-1) ... 260s Setting up r-bioc-s4arrays (1.6.0+dfsg-2) ... 260s Setting up r-cran-stringr (1.5.1-1) ... 260s Setting up r-bioc-biocparallel (1.40.0-2) ... 260s Setting up r-cran-callr (3.7.6-1) ... 260s Setting up r-bioc-rhtslib (3.2.0+dfsg-2) ... 260s Setting up r-cran-xml2 (1.3.7-1) ... 260s Setting up r-cran-munsell (0.5.1-1) ... 260s Setting up r-cran-tibble (3.2.1+dfsg-3) ... 260s Setting up r-cran-fontawesome (0.5.3-1) ... 260s Setting up r-bioc-biocio (1.16.0+dfsg-2) ... 260s Setting up gfortran (4:14.2.0-1ubuntu1) ... 260s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 260s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 260s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 260s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 260s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 260s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... 260s Setting up r-cran-reshape2 (1.4.4-2build1) ... 260s Setting up r-cran-httr2 (1.1.1-1) ... 260s Setting up r-cran-httr (1.4.7+dfsg-1) ... 260s Setting up r-cran-gridextra (2.3-3build1) ... 260s Setting up r-cran-hms (1.1.3-1) ... 260s Setting up r-cran-scales (1.3.0-1) ... 260s Setting up r-cran-memoise (2.0.1-1) ... 260s Setting up r-cran-promises (1.3.2+dfsg-1) ... 260s Setting up r-cran-purrr (1.0.4-1) ... 260s Setting up r-cran-vegan (2.6-10+dfsg-1ubuntu2) ... 260s Setting up r-cran-blob (1.2.4-1) ... 260s Setting up r-bioc-xvector (0.46.0-2) ... 260s Setting up r-cran-seriation (1.5.7-1) ... 260s Setting up r-cran-dplyr (1.1.4-4) ... 260s Setting up r-cran-rsqlite (2.3.9-1) ... 260s Setting up r-cran-progress (1.2.3-1) ... 260s Setting up r-cran-webshot (0.5.5-1) ... 260s Setting up r-base-dev (4.4.3-1) ... 260s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 260s Setting up r-bioc-sparsearray (1.6.2+dfsg-1) ... 260s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 260s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 260s Setting up r-cran-viridis (0.6.5-1) ... 260s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 260s Setting up r-cran-bslib (0.8.0+dfsg-1) ... 260s Setting up r-cran-tidyr (1.3.1-1) ... 260s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 260s Setting up r-cran-dbplyr (2.5.0+dfsg-1) ... 260s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 260s Setting up r-cran-dendextend (1.18.1+dfsg-1) ... 260s Setting up r-bioc-biocfilecache (2.14.0+dfsg-2) ... 260s Setting up r-cran-egg (0.4.5-3build1) ... 260s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 260s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 260s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 260s Setting up r-cran-shinyjs (2.1.0-1) ... 260s Setting up r-cran-miniui (0.1.1.1-3build1) ... 260s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 260s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... 260s Setting up r-cran-crosstalk (1.2.1+dfsg-1) ... 260s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 260s Setting up r-bioc-keggrest (1.46.0+dfsg-2) ... 260s Setting up r-bioc-annotationdbi (1.68.0-2) ... 260s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 260s Setting up r-cran-colourpicker (1.3.0+dfsg-1) ... 260s Setting up r-bioc-biomart (2.62.1+dfsg-1) ... 260s Setting up r-bioc-genomicalignments (1.42.0-2) ... 260s Setting up r-bioc-rtracklayer (1.66.0-2) ... 260s Setting up r-bioc-genomicfeatures (1.58.0+dfsg-2) ... 260s Setting up r-cran-plotly (4.10.4+dfsg-2) ... 260s Setting up r-cran-heatmaply (1.5.0+dfsg-1) ... 260s Setting up r-bioc-txdbmaker (1.2.1+ds-2) ... 260s Setting up r-bioc-degnorm (1.16.0+ds-2) ... 260s Processing triggers for man-db (2.13.0-1) ... 262s Processing triggers for install-info (7.1.1-1) ... 262s Processing triggers for libc-bin (2.41-1ubuntu2) ... 263s autopkgtest [22:02:06]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 263s autopkgtest [22:02:06]: test pkg-r-autopkgtest: [----------------------- 263s Test: Try to load the R library DegNorm 263s 263s R version 4.4.3 (2025-02-28) -- "Trophy Case" 263s Copyright (C) 2025 The R Foundation for Statistical Computing 263s Platform: x86_64-pc-linux-gnu 263s 263s R is free software and comes with ABSOLUTELY NO WARRANTY. 263s You are welcome to redistribute it under certain conditions. 263s Type 'license()' or 'licence()' for distribution details. 263s 263s R is a collaborative project with many contributors. 263s Type 'contributors()' for more information and 263s 'citation()' on how to cite R or R packages in publications. 263s 263s Type 'demo()' for some demos, 'help()' for on-line help, or 263s 'help.start()' for an HTML browser interface to help. 263s Type 'q()' to quit R. 263s 263s > library('DegNorm') 274s > 274s > 274s Other tests are currently unsupported! 274s They will be progressively added. 274s autopkgtest [22:02:17]: test pkg-r-autopkgtest: -----------------------] 275s autopkgtest [22:02:18]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 275s pkg-r-autopkgtest PASS 275s autopkgtest [22:02:18]: @@@@@@@@@@@@@@@@@@@@ summary 275s pkg-r-autopkgtest PASS 293s nova [W] Skipping flock for amd64 293s Creating nova instance adt-plucky-amd64-r-bioc-degnorm-20250315-215743-juju-7f2275-prod-proposed-migration-environment-2-c7776c3b-5917-481d-a98d-6bf166d3fbb0 from image adt/ubuntu-plucky-amd64-server-20250304.img (UUID 9c7d4da5-d95f-4c85-ac1f-51eb37e75c4c)... 293s nova [W] Timed out waiting for 1dff3fe4-9543-4e82-b4d9-ec17f0842431 to get deleted.