0s autopkgtest [19:04:11]: starting date and time: 2025-03-15 19:04:11+0000 1s autopkgtest [19:04:12]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 1s autopkgtest [19:04:12]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.kw9lrw_f/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-bioc-bsseq --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-8.secgroup --name adt-plucky-amd64-r-bioc-bsseq-20250315-190411-juju-7f2275-prod-proposed-migration-environment-20-a57d7d82-2be8-4926-8454-a10d95939ca7 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 50s autopkgtest [19:05:01]: testbed dpkg architecture: amd64 51s autopkgtest [19:05:02]: testbed apt version: 2.9.31ubuntu1 51s autopkgtest [19:05:02]: @@@@@@@@@@@@@@@@@@@@ test bed setup 51s autopkgtest [19:05:02]: testbed release detected to be: None 52s autopkgtest [19:05:03]: updating testbed package index (apt update) 52s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 53s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 53s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 53s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 53s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 53s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 53s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 53s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [123 kB] 53s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [97.6 kB] 53s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 c-n-f Metadata [1884 B] 53s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 c-n-f Metadata [116 B] 53s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [167 kB] 53s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [335 kB] 53s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 c-n-f Metadata [16.0 kB] 53s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [8452 B] 53s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [17.0 kB] 53s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 c-n-f Metadata [628 B] 54s Fetched 1387 kB in 1s (1397 kB/s) 54s Reading package lists... 56s Reading package lists... 56s Building dependency tree... 56s Reading state information... 56s Calculating upgrade... 57s Calculating upgrade... 57s The following package was automatically installed and is no longer required: 57s libnl-genl-3-200 57s Use 'sudo apt autoremove' to remove it. 57s The following NEW packages will be installed: 57s bpftool libdebuginfod-common libdebuginfod1t64 linux-headers-6.14.0-10 57s linux-headers-6.14.0-10-generic linux-image-6.14.0-10-generic 57s linux-modules-6.14.0-10-generic linux-modules-extra-6.14.0-10-generic 57s linux-perf linux-tools-6.14.0-10 linux-tools-6.14.0-10-generic pnp.ids 57s The following packages will be upgraded: 57s apparmor apt apt-utils binutils binutils-common binutils-x86-64-linux-gnu 57s cloud-init cloud-init-base curl dosfstools exfatprogs fwupd gcc-15-base 57s gir1.2-girepository-2.0 gir1.2-glib-2.0 htop hwdata initramfs-tools 57s initramfs-tools-bin initramfs-tools-core libapparmor1 libapt-pkg7.0 57s libassuan9 libatomic1 libaudit-common libaudit1 libbinutils libbrotli1 57s libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libctf-nobfd0 libctf0 57s libcurl3t64-gnutls libcurl4t64 libestr0 libftdi1-2 libfwupd3 libgcc-s1 57s libgirepository-1.0-1 libglib2.0-0t64 libglib2.0-data libgpgme11t64 57s libgprofng0 libjemalloc2 liblz4-1 liblzma5 libmm-glib0 libncurses6 57s libncursesw6 libnewt0.52 libnl-3-200 libnl-genl-3-200 libnl-route-3-200 57s libnss-systemd libpam-systemd libparted2t64 libpci3 libpython3-stdlib 57s libpython3.13 libpython3.13-minimal libpython3.13-stdlib libseccomp2 57s libselinux1 libsemanage-common libsemanage2 libsframe1 libsqlite3-0 57s libstdc++6 libsystemd-shared libsystemd0 libtinfo6 libudev1 libxml2 57s linux-firmware linux-generic linux-headers-generic linux-headers-virtual 57s linux-image-generic linux-image-virtual linux-libc-dev linux-tools-common 57s linux-virtual locales media-types ncurses-base ncurses-bin ncurses-term 57s parted pci.ids pciutils pinentry-curses python-apt-common python3 57s python3-apt python3-bcrypt python3-cffi-backend python3-dbus python3-gi 57s python3-jinja2 python3-lazr.uri python3-markupsafe python3-minimal 57s python3-newt python3-rpds-py python3-systemd python3-yaml python3.13 57s python3.13-gdbm python3.13-minimal rsync rsyslog strace systemd 57s systemd-cryptsetup systemd-resolved systemd-sysv systemd-timesyncd 57s ubuntu-kernel-accessories ubuntu-minimal ubuntu-standard udev whiptail 57s xz-utils 57s 126 upgraded, 12 newly installed, 0 to remove and 0 not upgraded. 57s Need to get 829 MB of archives. 57s After this operation, 325 MB of additional disk space will be used. 57s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-bin amd64 6.5+20250216-2 [194 kB] 57s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-dev-bin amd64 2.41-1ubuntu1 [24.7 kB] 57s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6-dev amd64 2.41-1ubuntu1 [2182 kB] 59s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 locales all 2.41-1ubuntu1 [4246 kB] 62s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6 amd64 2.41-1ubuntu1 [3327 kB] 64s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-bin amd64 2.41-1ubuntu1 [701 kB] 65s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-libc-dev amd64 6.14.0-10.10 [1723 kB] 66s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libatomic1 amd64 15-20250222-0ubuntu1 [10.4 kB] 66s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-15-base amd64 15-20250222-0ubuntu1 [53.4 kB] 66s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-s1 amd64 15-20250222-0ubuntu1 [77.8 kB] 66s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++6 amd64 15-20250222-0ubuntu1 [798 kB] 67s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-base all 6.5+20250216-2 [25.9 kB] 67s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-term all 6.5+20250216-2 [276 kB] 67s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 liblz4-1 amd64 1.10.0-4 [66.4 kB] 67s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma5 amd64 5.6.4-1 [157 kB] 67s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd0 amd64 257.3-1ubuntu3 [595 kB] 67s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libnss-systemd amd64 257.3-1ubuntu3 [199 kB] 67s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-sysv amd64 257.3-1ubuntu3 [11.9 kB] 67s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-resolved amd64 257.3-1ubuntu3 [345 kB] 67s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-systemd amd64 257.3-1ubuntu3 [302 kB] 68s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd-shared amd64 257.3-1ubuntu3 [2371 kB] 69s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd amd64 257.3-1ubuntu3 [3052 kB] 71s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-timesyncd amd64 257.3-1ubuntu3 [42.1 kB] 71s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-cryptsetup amd64 257.3-1ubuntu3 [124 kB] 71s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 udev amd64 257.3-1ubuntu3 [1404 kB] 72s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libudev1 amd64 257.3-1ubuntu3 [215 kB] 72s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit-common all 1:4.0.2-2ubuntu2 [6628 B] 72s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libcap-ng0 amd64 0.8.5-4build1 [15.6 kB] 72s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit1 amd64 1:4.0.2-2ubuntu2 [54.0 kB] 72s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libseccomp2 amd64 2.5.5-1ubuntu6 [53.5 kB] 72s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libselinux1 amd64 3.7-3ubuntu3 [87.3 kB] 72s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libapparmor1 amd64 4.1.0~beta5-0ubuntu8 [55.0 kB] 72s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libapt-pkg7.0 amd64 2.9.33 [1138 kB] 72s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 apt amd64 2.9.33 [1439 kB] 73s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 apt-utils amd64 2.9.33 [222 kB] 73s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-minimal amd64 3.13.2-2 [27.7 kB] 73s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 python3 amd64 3.13.2-2 [24.0 kB] 73s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13 amd64 3.13.2-2 [2341 kB] 74s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 media-types all 13.0.0 [29.9 kB] 74s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses6 amd64 6.5+20250216-2 [126 kB] 74s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libncursesw6 amd64 6.5+20250216-2 [165 kB] 74s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libtinfo6 amd64 6.5+20250216-2 [119 kB] 74s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libsqlite3-0 amd64 3.46.1-2 [715 kB] 74s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.2-2 [735 kB] 75s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.2-2 [2365 kB] 75s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.2-2 [883 kB] 76s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.2-2 [2066 kB] 77s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.4 kB] 77s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 rsync amd64 3.4.1+ds1-3 [482 kB] 77s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod-common all 0.192-4 [15.4 kB] 77s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage-common all 3.7-2.1build1 [7268 B] 77s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage2 amd64 3.7-2.1build1 [106 kB] 77s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libassuan9 amd64 3.0.2-2 [43.1 kB] 77s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-girepository-2.0 amd64 1.83.4-1 [25.3 kB] 77s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-glib-2.0 amd64 2.84.0-1 [184 kB] 77s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-0t64 amd64 2.84.0-1 [1669 kB] 77s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libgirepository-1.0-1 amd64 1.83.4-1 [89.5 kB] 77s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libestr0 amd64 0.1.11-2 [8340 B] 77s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-data all 2.84.0-1 [53.0 kB] 78s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-newt amd64 0.52.24-4ubuntu2 [21.1 kB] 78s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libnewt0.52 amd64 0.52.24-4ubuntu2 [55.7 kB] 78s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2ubuntu5 [772 kB] 78s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 python-apt-common all 2.9.9build1 [21.3 kB] 78s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-apt amd64 2.9.9build1 [172 kB] 78s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-cffi-backend amd64 1.17.1-2build2 [96.6 kB] 78s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dbus amd64 1.3.2-5build5 [102 kB] 78s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-4build1 [252 kB] 78s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-yaml amd64 6.0.2-1build2 [144 kB] 78s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 rsyslog amd64 8.2412.0-2ubuntu2 [555 kB] 78s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 whiptail amd64 0.52.24-4ubuntu2 [19.1 kB] 78s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-minimal amd64 1.549 [11.5 kB] 78s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 apparmor amd64 4.1.0~beta5-0ubuntu8 [701 kB] 78s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 dosfstools amd64 4.2-1.2 [95.0 kB] 78s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-genl-3-200 amd64 3.7.0-1 [12.2 kB] 78s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-route-3-200 amd64 3.7.0-1 [191 kB] 79s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-3-200 amd64 3.7.0-1 [64.9 kB] 79s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 parted amd64 3.6-5 [53.9 kB] 79s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libparted2t64 amd64 3.6-5 [158 kB] 79s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 pci.ids all 0.0~2025.03.09-1 [285 kB] 79s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 pciutils amd64 1:3.13.0-2 [110 kB] 79s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 libpci3 amd64 1:3.13.0-2 [39.8 kB] 79s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 strace amd64 6.13+ds-1ubuntu1 [622 kB] 79s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 xz-utils amd64 5.6.4-1 [278 kB] 79s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-standard amd64 1.549 [11.5 kB] 79s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libgprofng0 amd64 2.44-3ubuntu1 [886 kB] 79s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf0 amd64 2.44-3ubuntu1 [96.5 kB] 79s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf-nobfd0 amd64 2.44-3ubuntu1 [98.9 kB] 79s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-x86-64-linux-gnu amd64 2.44-3ubuntu1 [1108 kB] 80s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libbinutils amd64 2.44-3ubuntu1 [585 kB] 80s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils amd64 2.44-3ubuntu1 [208 kB] 80s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-common amd64 2.44-3ubuntu1 [215 kB] 80s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libsframe1 amd64 2.44-3ubuntu1 [14.8 kB] 80s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 hwdata all 0.393-3 [1562 B] 80s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 pnp.ids all 0.393-3 [29.5 kB] 80s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-common all 6.14.0-10.10 [295 kB] 81s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 bpftool amd64 7.6.0+6.14.0-10.10 [1147 kB] 81s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-markupsafe amd64 2.1.5-1build4 [13.4 kB] 81s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 81s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init-base all 25.1-0ubuntu3 [616 kB] 81s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libbrotli1 amd64 1.1.0-2build4 [365 kB] 82s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 curl amd64 8.12.1-3ubuntu1 [258 kB] 82s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4t64 amd64 8.12.1-3ubuntu1 [437 kB] 82s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 exfatprogs amd64 1.2.8-1 [76.3 kB] 82s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl3t64-gnutls amd64 8.12.1-3ubuntu1 [432 kB] 83s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 fwupd amd64 2.0.6-4 [5408 kB] 86s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libfwupd3 amd64 2.0.6-4 [136 kB] 86s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libmm-glib0 amd64 1.23.4-0ubuntu3 [251 kB] 86s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 htop amd64 3.4.0-2 [195 kB] 86s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-firmware amd64 20250310.git9e1370d3-0ubuntu1 [571 MB] 134s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools all 0.146ubuntu1 [7920 B] 134s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-core all 0.146ubuntu1 [51.9 kB] 134s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-bin amd64 0.146ubuntu1 [26.2 kB] 134s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod1t64 amd64 0.192-4 [21.0 kB] 134s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 libftdi1-2 amd64 1.5-8build1 [30.2 kB] 134s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libgpgme11t64 amd64 1.24.2-1ubuntu2 [155 kB] 134s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libjemalloc2 amd64 5.3.0-3 [277 kB] 134s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-6.14.0-10-generic amd64 6.14.0-10.10 [41.2 MB] 137s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-6.14.0-10-generic amd64 6.14.0-10.10 [15.3 MB] 138s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-extra-6.14.0-10-generic amd64 6.14.0-10.10 [120 MB] 146s Get:120 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-generic amd64 6.14.0-10.10 [1730 B] 146s Get:121 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-generic amd64 6.14.0-10.10 [11.1 kB] 146s Get:122 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-virtual amd64 6.14.0-10.10 [1722 B] 146s Get:123 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-virtual amd64 6.14.0-10.10 [11.1 kB] 146s Get:124 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-virtual amd64 6.14.0-10.10 [1642 B] 146s Get:125 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10 all 6.14.0-10.10 [14.2 MB] 146s Get:126 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10-generic amd64 6.14.0-10.10 [3915 kB] 147s Get:127 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-generic amd64 6.14.0-10.10 [11.0 kB] 147s Get:128 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-perf amd64 6.14.0-10.10 [4122 kB] 147s Get:129 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10 amd64 6.14.0-10.10 [1394 kB] 147s Get:130 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10-generic amd64 6.14.0-10.10 [830 B] 147s Get:131 http://ftpmaster.internal/ubuntu plucky/main amd64 pinentry-curses amd64 1.3.1-2ubuntu3 [42.3 kB] 147s Get:132 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lazr.uri all 1.0.6-6 [13.7 kB] 147s Get:133 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-rpds-py amd64 0.21.0-2ubuntu2 [278 kB] 147s Get:134 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-systemd amd64 235-1build6 [43.9 kB] 147s Get:135 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-gdbm amd64 3.13.2-2 [31.9 kB] 147s Get:136 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-kernel-accessories amd64 1.549 [11.2 kB] 147s Get:137 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init all 25.1-0ubuntu3 [2100 B] 147s Get:138 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-bcrypt amd64 4.2.0-2.1build1 [221 kB] 147s Preconfiguring packages ... 147s Fetched 829 MB in 1min 30s (9206 kB/s) 148s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109140 files and directories currently installed.) 148s Preparing to unpack .../ncurses-bin_6.5+20250216-2_amd64.deb ... 148s Unpacking ncurses-bin (6.5+20250216-2) over (6.5+20250216-1) ... 148s Setting up ncurses-bin (6.5+20250216-2) ... 148s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109140 files and directories currently installed.) 148s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu1_amd64.deb ... 148s Unpacking libc-dev-bin (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 148s Preparing to unpack .../libc6-dev_2.41-1ubuntu1_amd64.deb ... 148s Unpacking libc6-dev:amd64 (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 148s Preparing to unpack .../locales_2.41-1ubuntu1_all.deb ... 148s Unpacking locales (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 148s Preparing to unpack .../libc6_2.41-1ubuntu1_amd64.deb ... 149s Checking for services that may need to be restarted... 149s Checking init scripts... 149s Checking for services that may need to be restarted... 149s Checking init scripts... 149s Stopping some services possibly affected by the upgrade (will be restarted later): 149s cron: stopping...done. 149s 149s Unpacking libc6:amd64 (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 149s Setting up libc6:amd64 (2.41-1ubuntu1) ... 149s Checking for services that may need to be restarted... 149s Checking init scripts... 149s Restarting services possibly affected by the upgrade: 149s cron: restarting...done. 149s 149s Services restarted successfully. 149s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109141 files and directories currently installed.) 149s Preparing to unpack .../libc-bin_2.41-1ubuntu1_amd64.deb ... 149s Unpacking libc-bin (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 149s Setting up libc-bin (2.41-1ubuntu1) ... 150s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109141 files and directories currently installed.) 150s Preparing to unpack .../linux-libc-dev_6.14.0-10.10_amd64.deb ... 150s Unpacking linux-libc-dev:amd64 (6.14.0-10.10) over (6.12.0-16.16) ... 150s Preparing to unpack .../libatomic1_15-20250222-0ubuntu1_amd64.deb ... 150s Unpacking libatomic1:amd64 (15-20250222-0ubuntu1) over (15-20250213-1ubuntu1) ... 150s Preparing to unpack .../gcc-15-base_15-20250222-0ubuntu1_amd64.deb ... 150s Unpacking gcc-15-base:amd64 (15-20250222-0ubuntu1) over (15-20250213-1ubuntu1) ... 150s Setting up gcc-15-base:amd64 (15-20250222-0ubuntu1) ... 150s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 150s Preparing to unpack .../libgcc-s1_15-20250222-0ubuntu1_amd64.deb ... 150s Unpacking libgcc-s1:amd64 (15-20250222-0ubuntu1) over (15-20250213-1ubuntu1) ... 150s Setting up libgcc-s1:amd64 (15-20250222-0ubuntu1) ... 150s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 150s Preparing to unpack .../libstdc++6_15-20250222-0ubuntu1_amd64.deb ... 150s Unpacking libstdc++6:amd64 (15-20250222-0ubuntu1) over (15-20250213-1ubuntu1) ... 150s Setting up libstdc++6:amd64 (15-20250222-0ubuntu1) ... 150s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 150s Preparing to unpack .../ncurses-base_6.5+20250216-2_all.deb ... 150s Unpacking ncurses-base (6.5+20250216-2) over (6.5+20250216-1) ... 150s Setting up ncurses-base (6.5+20250216-2) ... 150s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 150s Preparing to unpack .../ncurses-term_6.5+20250216-2_all.deb ... 150s Unpacking ncurses-term (6.5+20250216-2) over (6.5+20250216-1) ... 151s Preparing to unpack .../liblz4-1_1.10.0-4_amd64.deb ... 151s Unpacking liblz4-1:amd64 (1.10.0-4) over (1.10.0-3) ... 151s Setting up liblz4-1:amd64 (1.10.0-4) ... 151s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 151s Preparing to unpack .../liblzma5_5.6.4-1_amd64.deb ... 151s Unpacking liblzma5:amd64 (5.6.4-1) over (5.6.3-1) ... 151s Setting up liblzma5:amd64 (5.6.4-1) ... 151s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 151s Preparing to unpack .../libsystemd0_257.3-1ubuntu3_amd64.deb ... 151s Unpacking libsystemd0:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 151s Setting up libsystemd0:amd64 (257.3-1ubuntu3) ... 151s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 151s Preparing to unpack .../libnss-systemd_257.3-1ubuntu3_amd64.deb ... 151s Unpacking libnss-systemd:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 151s Preparing to unpack .../systemd-sysv_257.3-1ubuntu3_amd64.deb ... 151s Unpacking systemd-sysv (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 151s Preparing to unpack .../systemd-resolved_257.3-1ubuntu3_amd64.deb ... 151s Unpacking systemd-resolved (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 151s Preparing to unpack .../libpam-systemd_257.3-1ubuntu3_amd64.deb ... 151s Unpacking libpam-systemd:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 151s Preparing to unpack .../libsystemd-shared_257.3-1ubuntu3_amd64.deb ... 151s Unpacking libsystemd-shared:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 152s Setting up libsystemd-shared:amd64 (257.3-1ubuntu3) ... 152s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 152s Preparing to unpack .../systemd_257.3-1ubuntu3_amd64.deb ... 152s Unpacking systemd (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 152s Preparing to unpack .../systemd-timesyncd_257.3-1ubuntu3_amd64.deb ... 152s Unpacking systemd-timesyncd (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 152s Preparing to unpack .../systemd-cryptsetup_257.3-1ubuntu3_amd64.deb ... 152s Unpacking systemd-cryptsetup (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 152s Preparing to unpack .../udev_257.3-1ubuntu3_amd64.deb ... 152s Unpacking udev (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 152s Preparing to unpack .../libudev1_257.3-1ubuntu3_amd64.deb ... 152s Unpacking libudev1:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 152s Setting up libudev1:amd64 (257.3-1ubuntu3) ... 152s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 152s Preparing to unpack .../libaudit-common_1%3a4.0.2-2ubuntu2_all.deb ... 152s Unpacking libaudit-common (1:4.0.2-2ubuntu2) over (1:4.0.2-2ubuntu1) ... 152s Setting up libaudit-common (1:4.0.2-2ubuntu2) ... 152s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 152s Preparing to unpack .../libcap-ng0_0.8.5-4build1_amd64.deb ... 152s Unpacking libcap-ng0:amd64 (0.8.5-4build1) over (0.8.5-4) ... 152s Setting up libcap-ng0:amd64 (0.8.5-4build1) ... 153s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 153s Preparing to unpack .../libaudit1_1%3a4.0.2-2ubuntu2_amd64.deb ... 153s Unpacking libaudit1:amd64 (1:4.0.2-2ubuntu2) over (1:4.0.2-2ubuntu1) ... 153s Setting up libaudit1:amd64 (1:4.0.2-2ubuntu2) ... 153s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 153s Preparing to unpack .../libseccomp2_2.5.5-1ubuntu6_amd64.deb ... 153s Unpacking libseccomp2:amd64 (2.5.5-1ubuntu6) over (2.5.5-1ubuntu5) ... 153s Setting up libseccomp2:amd64 (2.5.5-1ubuntu6) ... 153s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 153s Preparing to unpack .../libselinux1_3.7-3ubuntu3_amd64.deb ... 153s Unpacking libselinux1:amd64 (3.7-3ubuntu3) over (3.7-3ubuntu2) ... 153s Setting up libselinux1:amd64 (3.7-3ubuntu3) ... 153s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 153s Preparing to unpack .../libapparmor1_4.1.0~beta5-0ubuntu8_amd64.deb ... 153s Unpacking libapparmor1:amd64 (4.1.0~beta5-0ubuntu8) over (4.1.0~beta5-0ubuntu5) ... 153s Preparing to unpack .../libapt-pkg7.0_2.9.33_amd64.deb ... 153s Unpacking libapt-pkg7.0:amd64 (2.9.33) over (2.9.31ubuntu1) ... 153s Setting up libapt-pkg7.0:amd64 (2.9.33) ... 153s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 153s Preparing to unpack .../archives/apt_2.9.33_amd64.deb ... 153s Unpacking apt (2.9.33) over (2.9.31ubuntu1) ... 153s Setting up apt (2.9.33) ... 154s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 154s Preparing to unpack .../apt-utils_2.9.33_amd64.deb ... 154s Unpacking apt-utils (2.9.33) over (2.9.31ubuntu1) ... 154s Preparing to unpack .../python3-minimal_3.13.2-2_amd64.deb ... 154s Unpacking python3-minimal (3.13.2-2) over (3.13.2-1) ... 154s Setting up python3-minimal (3.13.2-2) ... 154s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 154s Preparing to unpack .../0-python3_3.13.2-2_amd64.deb ... 154s Unpacking python3 (3.13.2-2) over (3.13.2-1) ... 154s Preparing to unpack .../1-libpython3.13_3.13.2-2_amd64.deb ... 154s Unpacking libpython3.13:amd64 (3.13.2-2) over (3.13.2-1) ... 154s Preparing to unpack .../2-media-types_13.0.0_all.deb ... 154s Unpacking media-types (13.0.0) over (12.0.0) ... 154s Preparing to unpack .../3-libncurses6_6.5+20250216-2_amd64.deb ... 154s Unpacking libncurses6:amd64 (6.5+20250216-2) over (6.5+20250216-1) ... 154s Preparing to unpack .../4-libncursesw6_6.5+20250216-2_amd64.deb ... 154s Unpacking libncursesw6:amd64 (6.5+20250216-2) over (6.5+20250216-1) ... 155s Preparing to unpack .../5-libtinfo6_6.5+20250216-2_amd64.deb ... 155s Unpacking libtinfo6:amd64 (6.5+20250216-2) over (6.5+20250216-1) ... 155s Setting up libtinfo6:amd64 (6.5+20250216-2) ... 155s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 155s Preparing to unpack .../0-libsqlite3-0_3.46.1-2_amd64.deb ... 155s Unpacking libsqlite3-0:amd64 (3.46.1-2) over (3.46.1-1) ... 155s Preparing to unpack .../1-python3.13_3.13.2-2_amd64.deb ... 155s Unpacking python3.13 (3.13.2-2) over (3.13.2-1) ... 155s Preparing to unpack .../2-python3.13-minimal_3.13.2-2_amd64.deb ... 155s Unpacking python3.13-minimal (3.13.2-2) over (3.13.2-1) ... 155s Preparing to unpack .../3-libpython3.13-minimal_3.13.2-2_amd64.deb ... 155s Unpacking libpython3.13-minimal:amd64 (3.13.2-2) over (3.13.2-1) ... 155s Preparing to unpack .../4-libpython3.13-stdlib_3.13.2-2_amd64.deb ... 155s Unpacking libpython3.13-stdlib:amd64 (3.13.2-2) over (3.13.2-1) ... 155s Preparing to unpack .../5-libpython3-stdlib_3.13.2-2_amd64.deb ... 155s Unpacking libpython3-stdlib:amd64 (3.13.2-2) over (3.13.2-1) ... 155s Preparing to unpack .../6-rsync_3.4.1+ds1-3_amd64.deb ... 155s Unpacking rsync (3.4.1+ds1-3) over (3.4.1-0syncable1) ... 155s Selecting previously unselected package libdebuginfod-common. 155s Preparing to unpack .../7-libdebuginfod-common_0.192-4_all.deb ... 155s Unpacking libdebuginfod-common (0.192-4) ... 155s Preparing to unpack .../8-libsemanage-common_3.7-2.1build1_all.deb ... 155s Unpacking libsemanage-common (3.7-2.1build1) over (3.7-2.1) ... 155s Setting up libsemanage-common (3.7-2.1build1) ... 155s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109155 files and directories currently installed.) 155s Preparing to unpack .../libsemanage2_3.7-2.1build1_amd64.deb ... 155s Unpacking libsemanage2:amd64 (3.7-2.1build1) over (3.7-2.1) ... 155s Setting up libsemanage2:amd64 (3.7-2.1build1) ... 155s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109155 files and directories currently installed.) 155s Preparing to unpack .../libassuan9_3.0.2-2_amd64.deb ... 155s Unpacking libassuan9:amd64 (3.0.2-2) over (3.0.1-2) ... 155s Setting up libassuan9:amd64 (3.0.2-2) ... 156s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109155 files and directories currently installed.) 156s Preparing to unpack .../00-gir1.2-girepository-2.0_1.83.4-1_amd64.deb ... 156s Unpacking gir1.2-girepository-2.0:amd64 (1.83.4-1) over (1.82.0-4) ... 156s Preparing to unpack .../01-gir1.2-glib-2.0_2.84.0-1_amd64.deb ... 156s Unpacking gir1.2-glib-2.0:amd64 (2.84.0-1) over (2.83.5-1) ... 156s Preparing to unpack .../02-libglib2.0-0t64_2.84.0-1_amd64.deb ... 156s Unpacking libglib2.0-0t64:amd64 (2.84.0-1) over (2.83.5-1) ... 156s Preparing to unpack .../03-libgirepository-1.0-1_1.83.4-1_amd64.deb ... 156s Unpacking libgirepository-1.0-1:amd64 (1.83.4-1) over (1.82.0-4) ... 156s Preparing to unpack .../04-libestr0_0.1.11-2_amd64.deb ... 156s Unpacking libestr0:amd64 (0.1.11-2) over (0.1.11-1build1) ... 156s Preparing to unpack .../05-libglib2.0-data_2.84.0-1_all.deb ... 156s Unpacking libglib2.0-data (2.84.0-1) over (2.83.5-1) ... 156s Preparing to unpack .../06-python3-newt_0.52.24-4ubuntu2_amd64.deb ... 156s Unpacking python3-newt:amd64 (0.52.24-4ubuntu2) over (0.52.24-4ubuntu1) ... 156s Preparing to unpack .../07-libnewt0.52_0.52.24-4ubuntu2_amd64.deb ... 156s Unpacking libnewt0.52:amd64 (0.52.24-4ubuntu2) over (0.52.24-4ubuntu1) ... 156s Preparing to unpack .../08-libxml2_2.12.7+dfsg+really2.9.14-0.2ubuntu5_amd64.deb ... 156s Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2ubuntu5) over (2.12.7+dfsg+really2.9.14-0.2ubuntu4) ... 156s Preparing to unpack .../09-python-apt-common_2.9.9build1_all.deb ... 156s Unpacking python-apt-common (2.9.9build1) over (2.9.9) ... 156s Preparing to unpack .../10-python3-apt_2.9.9build1_amd64.deb ... 156s Unpacking python3-apt (2.9.9build1) over (2.9.9) ... 156s Preparing to unpack .../11-python3-cffi-backend_1.17.1-2build2_amd64.deb ... 156s Unpacking python3-cffi-backend:amd64 (1.17.1-2build2) over (1.17.1-2build1) ... 156s Preparing to unpack .../12-python3-dbus_1.3.2-5build5_amd64.deb ... 156s Unpacking python3-dbus (1.3.2-5build5) over (1.3.2-5build4) ... 156s Preparing to unpack .../13-python3-gi_3.50.0-4build1_amd64.deb ... 156s Unpacking python3-gi (3.50.0-4build1) over (3.50.0-4) ... 156s Preparing to unpack .../14-python3-yaml_6.0.2-1build2_amd64.deb ... 157s Unpacking python3-yaml (6.0.2-1build2) over (6.0.2-1build1) ... 157s Preparing to unpack .../15-rsyslog_8.2412.0-2ubuntu2_amd64.deb ... 157s Unpacking rsyslog (8.2412.0-2ubuntu2) over (8.2412.0-2ubuntu1) ... 157s Preparing to unpack .../16-whiptail_0.52.24-4ubuntu2_amd64.deb ... 157s Unpacking whiptail (0.52.24-4ubuntu2) over (0.52.24-4ubuntu1) ... 157s Preparing to unpack .../17-ubuntu-minimal_1.549_amd64.deb ... 157s Unpacking ubuntu-minimal (1.549) over (1.548) ... 157s Preparing to unpack .../18-apparmor_4.1.0~beta5-0ubuntu8_amd64.deb ... 157s Unpacking apparmor (4.1.0~beta5-0ubuntu8) over (4.1.0~beta5-0ubuntu5) ... 158s Preparing to unpack .../19-dosfstools_4.2-1.2_amd64.deb ... 158s Unpacking dosfstools (4.2-1.2) over (4.2-1.1build1) ... 158s Preparing to unpack .../20-libnl-genl-3-200_3.7.0-1_amd64.deb ... 158s Unpacking libnl-genl-3-200:amd64 (3.7.0-1) over (3.7.0-0.3build2) ... 158s Preparing to unpack .../21-libnl-route-3-200_3.7.0-1_amd64.deb ... 158s Unpacking libnl-route-3-200:amd64 (3.7.0-1) over (3.7.0-0.3build2) ... 158s Preparing to unpack .../22-libnl-3-200_3.7.0-1_amd64.deb ... 158s Unpacking libnl-3-200:amd64 (3.7.0-1) over (3.7.0-0.3build2) ... 158s Preparing to unpack .../23-parted_3.6-5_amd64.deb ... 158s Unpacking parted (3.6-5) over (3.6-4build1) ... 158s Preparing to unpack .../24-libparted2t64_3.6-5_amd64.deb ... 158s Adding 'diversion of /lib/x86_64-linux-gnu/libparted.so.2 to /lib/x86_64-linux-gnu/libparted.so.2.usr-is-merged by libparted2t64' 158s Adding 'diversion of /lib/x86_64-linux-gnu/libparted.so.2.0.5 to /lib/x86_64-linux-gnu/libparted.so.2.0.5.usr-is-merged by libparted2t64' 158s Unpacking libparted2t64:amd64 (3.6-5) over (3.6-4build1) ... 158s Preparing to unpack .../25-pci.ids_0.0~2025.03.09-1_all.deb ... 158s Unpacking pci.ids (0.0~2025.03.09-1) over (0.0~2025.02.12-1) ... 158s Preparing to unpack .../26-pciutils_1%3a3.13.0-2_amd64.deb ... 158s Unpacking pciutils (1:3.13.0-2) over (1:3.13.0-1) ... 158s Preparing to unpack .../27-libpci3_1%3a3.13.0-2_amd64.deb ... 158s Unpacking libpci3:amd64 (1:3.13.0-2) over (1:3.13.0-1) ... 158s Preparing to unpack .../28-strace_6.13+ds-1ubuntu1_amd64.deb ... 158s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 158s Preparing to unpack .../29-xz-utils_5.6.4-1_amd64.deb ... 158s Unpacking xz-utils (5.6.4-1) over (5.6.3-1) ... 158s Preparing to unpack .../30-ubuntu-standard_1.549_amd64.deb ... 158s Unpacking ubuntu-standard (1.549) over (1.548) ... 158s Preparing to unpack .../31-libgprofng0_2.44-3ubuntu1_amd64.deb ... 158s Unpacking libgprofng0:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 158s Preparing to unpack .../32-libctf0_2.44-3ubuntu1_amd64.deb ... 158s Unpacking libctf0:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 158s Preparing to unpack .../33-libctf-nobfd0_2.44-3ubuntu1_amd64.deb ... 158s Unpacking libctf-nobfd0:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 158s Preparing to unpack .../34-binutils-x86-64-linux-gnu_2.44-3ubuntu1_amd64.deb ... 158s Unpacking binutils-x86-64-linux-gnu (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 159s Preparing to unpack .../35-libbinutils_2.44-3ubuntu1_amd64.deb ... 159s Unpacking libbinutils:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 159s Preparing to unpack .../36-binutils_2.44-3ubuntu1_amd64.deb ... 159s Unpacking binutils (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 159s Preparing to unpack .../37-binutils-common_2.44-3ubuntu1_amd64.deb ... 159s Unpacking binutils-common:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 159s Preparing to unpack .../38-libsframe1_2.44-3ubuntu1_amd64.deb ... 159s Unpacking libsframe1:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 159s Preparing to unpack .../39-hwdata_0.393-3_all.deb ... 159s Unpacking hwdata (0.393-3) over (0.392-1) ... 159s Selecting previously unselected package pnp.ids. 159s Preparing to unpack .../40-pnp.ids_0.393-3_all.deb ... 159s Unpacking pnp.ids (0.393-3) ... 159s Preparing to unpack .../41-linux-tools-common_6.14.0-10.10_all.deb ... 159s Unpacking linux-tools-common (6.14.0-10.10) over (6.12.0-16.16) ... 159s Selecting previously unselected package bpftool. 159s Preparing to unpack .../42-bpftool_7.6.0+6.14.0-10.10_amd64.deb ... 159s Unpacking bpftool (7.6.0+6.14.0-10.10) ... 159s Preparing to unpack .../43-python3-markupsafe_2.1.5-1build4_amd64.deb ... 159s Unpacking python3-markupsafe (2.1.5-1build4) over (2.1.5-1build3) ... 159s Preparing to unpack .../44-python3-jinja2_3.1.5-2ubuntu1_all.deb ... 159s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 159s Preparing to unpack .../45-cloud-init-base_25.1-0ubuntu3_all.deb ... 159s Unpacking cloud-init-base (25.1-0ubuntu3) over (25.1-0ubuntu2) ... 160s Preparing to unpack .../46-libbrotli1_1.1.0-2build4_amd64.deb ... 160s Unpacking libbrotli1:amd64 (1.1.0-2build4) over (1.1.0-2build3) ... 160s Preparing to unpack .../47-curl_8.12.1-3ubuntu1_amd64.deb ... 160s Unpacking curl (8.12.1-3ubuntu1) over (8.12.1-2ubuntu1) ... 160s Preparing to unpack .../48-libcurl4t64_8.12.1-3ubuntu1_amd64.deb ... 160s Unpacking libcurl4t64:amd64 (8.12.1-3ubuntu1) over (8.12.1-2ubuntu1) ... 160s Preparing to unpack .../49-exfatprogs_1.2.8-1_amd64.deb ... 160s Unpacking exfatprogs (1.2.8-1) over (1.2.7-3) ... 160s Preparing to unpack .../50-libcurl3t64-gnutls_8.12.1-3ubuntu1_amd64.deb ... 160s Unpacking libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) over (8.12.1-2ubuntu1) ... 160s Preparing to unpack .../51-fwupd_2.0.6-4_amd64.deb ... 160s Unpacking fwupd (2.0.6-4) over (2.0.6-3) ... 160s Preparing to unpack .../52-libfwupd3_2.0.6-4_amd64.deb ... 160s Unpacking libfwupd3:amd64 (2.0.6-4) over (2.0.6-3) ... 160s Preparing to unpack .../53-libmm-glib0_1.23.4-0ubuntu3_amd64.deb ... 160s Unpacking libmm-glib0:amd64 (1.23.4-0ubuntu3) over (1.23.4-0ubuntu2) ... 160s Preparing to unpack .../54-htop_3.4.0-2_amd64.deb ... 160s Unpacking htop (3.4.0-2) over (3.3.0-5) ... 160s Preparing to unpack .../55-linux-firmware_20250310.git9e1370d3-0ubuntu1_amd64.deb ... 160s Unpacking linux-firmware (20250310.git9e1370d3-0ubuntu1) over (20250204.git0fd450ee-0ubuntu1) ... 163s Preparing to unpack .../56-initramfs-tools_0.146ubuntu1_all.deb ... 163s Unpacking initramfs-tools (0.146ubuntu1) over (0.145ubuntu3) ... 163s Preparing to unpack .../57-initramfs-tools-core_0.146ubuntu1_all.deb ... 163s Unpacking initramfs-tools-core (0.146ubuntu1) over (0.145ubuntu3) ... 163s Preparing to unpack .../58-initramfs-tools-bin_0.146ubuntu1_amd64.deb ... 163s Unpacking initramfs-tools-bin (0.146ubuntu1) over (0.145ubuntu3) ... 164s Selecting previously unselected package libdebuginfod1t64:amd64. 164s Preparing to unpack .../59-libdebuginfod1t64_0.192-4_amd64.deb ... 164s Unpacking libdebuginfod1t64:amd64 (0.192-4) ... 164s Preparing to unpack .../60-libftdi1-2_1.5-8build1_amd64.deb ... 164s Unpacking libftdi1-2:amd64 (1.5-8build1) over (1.5-8) ... 164s Preparing to unpack .../61-libgpgme11t64_1.24.2-1ubuntu2_amd64.deb ... 164s Unpacking libgpgme11t64:amd64 (1.24.2-1ubuntu2) over (1.24.2-1ubuntu1) ... 164s Preparing to unpack .../62-libjemalloc2_5.3.0-3_amd64.deb ... 164s Unpacking libjemalloc2:amd64 (5.3.0-3) over (5.3.0-2build1) ... 164s Selecting previously unselected package linux-modules-6.14.0-10-generic. 164s Preparing to unpack .../63-linux-modules-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 164s Unpacking linux-modules-6.14.0-10-generic (6.14.0-10.10) ... 164s Selecting previously unselected package linux-image-6.14.0-10-generic. 164s Preparing to unpack .../64-linux-image-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 164s Unpacking linux-image-6.14.0-10-generic (6.14.0-10.10) ... 164s Selecting previously unselected package linux-modules-extra-6.14.0-10-generic. 164s Preparing to unpack .../65-linux-modules-extra-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 164s Unpacking linux-modules-extra-6.14.0-10-generic (6.14.0-10.10) ... 165s Preparing to unpack .../66-linux-generic_6.14.0-10.10_amd64.deb ... 165s Unpacking linux-generic (6.14.0-10.10) over (6.12.0-16.16+2) ... 165s Preparing to unpack .../67-linux-image-generic_6.14.0-10.10_amd64.deb ... 165s Unpacking linux-image-generic (6.14.0-10.10) over (6.12.0-16.16+2) ... 165s Preparing to unpack .../68-linux-virtual_6.14.0-10.10_amd64.deb ... 165s Unpacking linux-virtual (6.14.0-10.10) over (6.12.0-16.16+2) ... 165s Preparing to unpack .../69-linux-image-virtual_6.14.0-10.10_amd64.deb ... 165s Unpacking linux-image-virtual (6.14.0-10.10) over (6.12.0-16.16+2) ... 165s Preparing to unpack .../70-linux-headers-virtual_6.14.0-10.10_amd64.deb ... 165s Unpacking linux-headers-virtual (6.14.0-10.10) over (6.12.0-16.16+2) ... 165s Selecting previously unselected package linux-headers-6.14.0-10. 165s Preparing to unpack .../71-linux-headers-6.14.0-10_6.14.0-10.10_all.deb ... 165s Unpacking linux-headers-6.14.0-10 (6.14.0-10.10) ... 168s Selecting previously unselected package linux-headers-6.14.0-10-generic. 168s Preparing to unpack .../72-linux-headers-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 168s Unpacking linux-headers-6.14.0-10-generic (6.14.0-10.10) ... 169s Preparing to unpack .../73-linux-headers-generic_6.14.0-10.10_amd64.deb ... 169s Unpacking linux-headers-generic (6.14.0-10.10) over (6.12.0-16.16+2) ... 169s Selecting previously unselected package linux-perf. 169s Preparing to unpack .../74-linux-perf_6.14.0-10.10_amd64.deb ... 169s Unpacking linux-perf (6.14.0-10.10) ... 169s Selecting previously unselected package linux-tools-6.14.0-10. 169s Preparing to unpack .../75-linux-tools-6.14.0-10_6.14.0-10.10_amd64.deb ... 169s Unpacking linux-tools-6.14.0-10 (6.14.0-10.10) ... 170s Selecting previously unselected package linux-tools-6.14.0-10-generic. 170s Preparing to unpack .../76-linux-tools-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 170s Unpacking linux-tools-6.14.0-10-generic (6.14.0-10.10) ... 170s Preparing to unpack .../77-pinentry-curses_1.3.1-2ubuntu3_amd64.deb ... 170s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 170s Preparing to unpack .../78-python3-lazr.uri_1.0.6-6_all.deb ... 170s Unpacking python3-lazr.uri (1.0.6-6) over (1.0.6-5) ... 170s Preparing to unpack .../79-python3-rpds-py_0.21.0-2ubuntu2_amd64.deb ... 170s Unpacking python3-rpds-py (0.21.0-2ubuntu2) over (0.21.0-2ubuntu1) ... 170s Preparing to unpack .../80-python3-systemd_235-1build6_amd64.deb ... 170s Unpacking python3-systemd (235-1build6) over (235-1build5) ... 170s Preparing to unpack .../81-python3.13-gdbm_3.13.2-2_amd64.deb ... 170s Unpacking python3.13-gdbm (3.13.2-2) over (3.13.2-1) ... 170s Preparing to unpack .../82-ubuntu-kernel-accessories_1.549_amd64.deb ... 170s Unpacking ubuntu-kernel-accessories (1.549) over (1.548) ... 170s Preparing to unpack .../83-cloud-init_25.1-0ubuntu3_all.deb ... 170s Unpacking cloud-init (25.1-0ubuntu3) over (25.1-0ubuntu2) ... 170s Preparing to unpack .../84-python3-bcrypt_4.2.0-2.1build1_amd64.deb ... 170s Unpacking python3-bcrypt (4.2.0-2.1build1) over (4.2.0-2.1) ... 170s Setting up linux-headers-6.14.0-10 (6.14.0-10.10) ... 170s Setting up media-types (13.0.0) ... 170s Installing new version of config file /etc/mime.types ... 170s Setting up linux-headers-6.14.0-10-generic (6.14.0-10.10) ... 170s Setting up ubuntu-kernel-accessories (1.549) ... 170s Setting up libapparmor1:amd64 (4.1.0~beta5-0ubuntu8) ... 170s Setting up pci.ids (0.0~2025.03.09-1) ... 170s Setting up libnewt0.52:amd64 (0.52.24-4ubuntu2) ... 170s Setting up apt-utils (2.9.33) ... 170s Setting up libdebuginfod-common (0.192-4) ... 170s Setting up exfatprogs (1.2.8-1) ... 170s Setting up linux-firmware (20250310.git9e1370d3-0ubuntu1) ... 170s Setting up bpftool (7.6.0+6.14.0-10.10) ... 170s Setting up libestr0:amd64 (0.1.11-2) ... 170s Setting up libbrotli1:amd64 (1.1.0-2build4) ... 170s Setting up libsqlite3-0:amd64 (3.46.1-2) ... 170s Setting up dosfstools (4.2-1.2) ... 170s Setting up rsyslog (8.2412.0-2ubuntu2) ... 170s info: The user `syslog' is already a member of `adm'. 171s Setting up binutils-common:amd64 (2.44-3ubuntu1) ... 171s Setting up libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) ... 171s Setting up linux-libc-dev:amd64 (6.14.0-10.10) ... 171s Setting up libctf-nobfd0:amd64 (2.44-3ubuntu1) ... 171s Setting up systemd (257.3-1ubuntu3) ... 171s /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring. 172s Created symlink '/run/systemd/system/tmp.mount' → '/dev/null'. 172s /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring. 172s Setting up libparted2t64:amd64 (3.6-5) ... 172s Removing 'diversion of /lib/x86_64-linux-gnu/libparted.so.2 to /lib/x86_64-linux-gnu/libparted.so.2.usr-is-merged by libparted2t64' 172s Removing 'diversion of /lib/x86_64-linux-gnu/libparted.so.2.0.5 to /lib/x86_64-linux-gnu/libparted.so.2.0.5.usr-is-merged by libparted2t64' 172s Setting up linux-headers-generic (6.14.0-10.10) ... 172s Setting up libjemalloc2:amd64 (5.3.0-3) ... 172s Setting up locales (2.41-1ubuntu1) ... 172s Installing new version of config file /etc/locale.alias ... 173s Generating locales (this might take a while)... 174s en_US.UTF-8... done 174s Generation complete. 174s Setting up libsframe1:amd64 (2.44-3ubuntu1) ... 174s Setting up libpython3.13-minimal:amd64 (3.13.2-2) ... 174s Setting up apparmor (4.1.0~beta5-0ubuntu8) ... 175s Installing new version of config file /etc/apparmor.d/fusermount3 ... 175s Installing new version of config file /etc/apparmor.d/lsusb ... 175s Installing new version of config file /etc/apparmor.d/openvpn ... 176s Reloading AppArmor profiles 177s Setting up libftdi1-2:amd64 (1.5-8build1) ... 177s Setting up libglib2.0-data (2.84.0-1) ... 177s Setting up systemd-cryptsetup (257.3-1ubuntu3) ... 177s Setting up libncurses6:amd64 (6.5+20250216-2) ... 177s Setting up strace (6.13+ds-1ubuntu1) ... 177s Setting up xz-utils (5.6.4-1) ... 177s Setting up systemd-timesyncd (257.3-1ubuntu3) ... 177s systemd-time-wait-sync.service is a disabled or a static unit not running, not starting it. 178s Setting up libatomic1:amd64 (15-20250222-0ubuntu1) ... 178s Setting up udev (257.3-1ubuntu3) ... 178s Setting up linux-modules-6.14.0-10-generic (6.14.0-10.10) ... 180s Setting up libncursesw6:amd64 (6.5+20250216-2) ... 180s Setting up libpci3:amd64 (1:3.13.0-2) ... 180s Setting up whiptail (0.52.24-4ubuntu2) ... 180s Setting up python-apt-common (2.9.9build1) ... 180s Setting up pnp.ids (0.393-3) ... 180s Setting up libnl-3-200:amd64 (3.7.0-1) ... 180s Setting up python3.13-minimal (3.13.2-2) ... 181s Setting up libgpgme11t64:amd64 (1.24.2-1ubuntu2) ... 181s Setting up libbinutils:amd64 (2.44-3ubuntu1) ... 181s Setting up libc-dev-bin (2.41-1ubuntu1) ... 181s Setting up libpython3.13-stdlib:amd64 (3.13.2-2) ... 181s Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2ubuntu5) ... 181s Setting up rsync (3.4.1+ds1-3) ... 182s rsync.service is a disabled or a static unit not running, not starting it. 182s Setting up python3.13-gdbm (3.13.2-2) ... 182s Setting up libpython3-stdlib:amd64 (3.13.2-2) ... 182s Setting up systemd-resolved (257.3-1ubuntu3) ... 182s Setting up initramfs-tools-bin (0.146ubuntu1) ... 182s Setting up ncurses-term (6.5+20250216-2) ... 182s Setting up libctf0:amd64 (2.44-3ubuntu1) ... 182s Setting up libpython3.13:amd64 (3.13.2-2) ... 182s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 182s Setting up libdebuginfod1t64:amd64 (0.192-4) ... 182s Setting up systemd-sysv (257.3-1ubuntu3) ... 182s Setting up linux-headers-virtual (6.14.0-10.10) ... 182s Setting up libcurl4t64:amd64 (8.12.1-3ubuntu1) ... 182s Setting up python3.13 (3.13.2-2) ... 183s Setting up htop (3.4.0-2) ... 183s Setting up linux-image-6.14.0-10-generic (6.14.0-10.10) ... 185s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.12.0-16-generic 185s I: /boot/initrd.img.old is now a symlink to initrd.img-6.12.0-16-generic 185s I: /boot/vmlinuz is now a symlink to vmlinuz-6.14.0-10-generic 185s I: /boot/initrd.img is now a symlink to initrd.img-6.14.0-10-generic 185s Setting up parted (3.6-5) ... 185s Setting up libnss-systemd:amd64 (257.3-1ubuntu3) ... 185s Setting up python3 (3.13.2-2) ... 185s Setting up python3-newt:amd64 (0.52.24-4ubuntu2) ... 186s Setting up python3-markupsafe (2.1.5-1build4) ... 186s Setting up linux-modules-extra-6.14.0-10-generic (6.14.0-10.10) ... 188s Setting up libnl-route-3-200:amd64 (3.7.0-1) ... 188s Setting up hwdata (0.393-3) ... 188s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 188s Setting up libglib2.0-0t64:amd64 (2.84.0-1) ... 188s No schema files found: doing nothing. 188s Setting up libgprofng0:amd64 (2.44-3ubuntu1) ... 188s Setting up linux-perf (6.14.0-10.10) ... 188s Setting up gir1.2-glib-2.0:amd64 (2.84.0-1) ... 188s Setting up pciutils (1:3.13.0-2) ... 188s Setting up python3-rpds-py (0.21.0-2ubuntu2) ... 188s Setting up libmm-glib0:amd64 (1.23.4-0ubuntu3) ... 188s Setting up libnl-genl-3-200:amd64 (3.7.0-1) ... 188s Setting up libpam-systemd:amd64 (257.3-1ubuntu3) ... 188s Setting up libc6-dev:amd64 (2.41-1ubuntu1) ... 188s Setting up libgirepository-1.0-1:amd64 (1.83.4-1) ... 188s Setting up curl (8.12.1-3ubuntu1) ... 188s Setting up linux-image-virtual (6.14.0-10.10) ... 188s Setting up initramfs-tools-core (0.146ubuntu1) ... 188s Setting up linux-tools-common (6.14.0-10.10) ... 188s Setting up python3-systemd (235-1build6) ... 188s Setting up python3-cffi-backend:amd64 (1.17.1-2build2) ... 188s Setting up binutils-x86-64-linux-gnu (2.44-3ubuntu1) ... 188s Setting up linux-image-generic (6.14.0-10.10) ... 188s Setting up python3-dbus (1.3.2-5build5) ... 188s Setting up linux-tools-6.14.0-10 (6.14.0-10.10) ... 188s Setting up initramfs-tools (0.146ubuntu1) ... 188s Installing new version of config file /etc/kernel/postinst.d/initramfs-tools ... 188s Installing new version of config file /etc/kernel/postrm.d/initramfs-tools ... 188s update-initramfs: deferring update (trigger activated) 188s Setting up linux-generic (6.14.0-10.10) ... 188s Setting up ubuntu-minimal (1.549) ... 188s Setting up python3-apt (2.9.9build1) ... 189s Setting up python3-bcrypt (4.2.0-2.1build1) ... 189s Setting up python3-yaml (6.0.2-1build2) ... 189s Setting up libfwupd3:amd64 (2.0.6-4) ... 189s Setting up python3-lazr.uri (1.0.6-6) ... 189s Setting up binutils (2.44-3ubuntu1) ... 189s Setting up ubuntu-standard (1.549) ... 189s Setting up cloud-init-base (25.1-0ubuntu3) ... 190s Setting up linux-virtual (6.14.0-10.10) ... 190s Setting up gir1.2-girepository-2.0:amd64 (1.83.4-1) ... 190s Setting up python3-gi (3.50.0-4build1) ... 191s Setting up linux-tools-6.14.0-10-generic (6.14.0-10.10) ... 191s Setting up fwupd (2.0.6-4) ... 192s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 192s fwupd.service is a disabled or a static unit not running, not starting it. 192s Setting up cloud-init (25.1-0ubuntu3) ... 192s Processing triggers for man-db (2.13.0-1) ... 193s Processing triggers for dbus (1.16.2-1ubuntu1) ... 193s Processing triggers for shared-mime-info (2.4-5) ... 193s Warning: program compiled against libxml 212 using older 209 193s Processing triggers for libc-bin (2.41-1ubuntu1) ... 193s Processing triggers for linux-image-6.14.0-10-generic (6.14.0-10.10) ... 193s /etc/kernel/postinst.d/initramfs-tools: 193s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 193s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 203s /etc/kernel/postinst.d/zz-update-grub: 203s Sourcing file `/etc/default/grub' 203s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 203s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 203s Generating grub configuration file ... 204s Found linux image: /boot/vmlinuz-6.14.0-10-generic 204s Found initrd image: /boot/initrd.img-6.14.0-10-generic 204s Found linux image: /boot/vmlinuz-6.12.0-16-generic 204s Found initrd image: /boot/initrd.img-6.12.0-16-generic 204s Found linux image: /boot/vmlinuz-6.11.0-8-generic 204s Found initrd image: /boot/initrd.img-6.11.0-8-generic 204s Warning: os-prober will not be executed to detect other bootable partitions. 204s Systems on them will not be added to the GRUB boot configuration. 204s Check GRUB_DISABLE_OS_PROBER documentation entry. 204s Adding boot menu entry for UEFI Firmware Settings ... 204s done 204s Processing triggers for initramfs-tools (0.146ubuntu1) ... 204s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 204s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 215s Reading package lists... 215s Building dependency tree... 215s Reading state information... 216s Solving dependencies... 216s The following packages will be REMOVED: 216s libnl-genl-3-200* libnsl2* libpython3.12-minimal* libpython3.12-stdlib* 216s libpython3.12t64* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 216s linux-headers-6.12.0-16* linux-headers-6.12.0-16-generic* 216s linux-image-6.11.0-8-generic* linux-image-6.12.0-16-generic* 216s linux-modules-6.11.0-8-generic* linux-modules-6.12.0-16-generic* 216s linux-modules-extra-6.12.0-16-generic* linux-tools-6.11.0-8* 216s linux-tools-6.11.0-8-generic* linux-tools-6.12.0-16* 216s linux-tools-6.12.0-16-generic* 216s 0 upgraded, 0 newly installed, 18 to remove and 5 not upgraded. 216s After this operation, 545 MB disk space will be freed. 216s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 148643 files and directories currently installed.) 216s Removing libnl-genl-3-200:amd64 (3.7.0-1) ... 216s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 216s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 216s Removing libpython3.12t64:amd64 (3.12.9-1) ... 216s Removing libpython3.12-stdlib:amd64 (3.12.9-1) ... 216s Removing libnsl2:amd64 (1.3.0-3build3) ... 216s Removing libpython3.12-minimal:amd64 (3.12.9-1) ... 216s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 217s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 219s Removing linux-headers-6.12.0-16-generic (6.12.0-16.16) ... 219s Removing linux-headers-6.12.0-16 (6.12.0-16.16) ... 221s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 221s /etc/kernel/postrm.d/initramfs-tools: 221s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 221s /etc/kernel/postrm.d/zz-update-grub: 221s Sourcing file `/etc/default/grub' 221s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 221s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 221s Generating grub configuration file ... 221s Found linux image: /boot/vmlinuz-6.14.0-10-generic 221s Found initrd image: /boot/initrd.img-6.14.0-10-generic 221s Found linux image: /boot/vmlinuz-6.12.0-16-generic 221s Found initrd image: /boot/initrd.img-6.12.0-16-generic 222s Warning: os-prober will not be executed to detect other bootable partitions. 222s Systems on them will not be added to the GRUB boot configuration. 222s Check GRUB_DISABLE_OS_PROBER documentation entry. 222s Adding boot menu entry for UEFI Firmware Settings ... 222s done 222s Removing linux-image-6.12.0-16-generic (6.12.0-16.16) ... 222s W: Removing the running kernel 222s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic 222s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic 222s /etc/kernel/postrm.d/initramfs-tools: 222s update-initramfs: Deleting /boot/initrd.img-6.12.0-16-generic 222s /etc/kernel/postrm.d/zz-update-grub: 222s Sourcing file `/etc/default/grub' 222s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 222s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 222s Generating grub configuration file ... 223s Found linux image: /boot/vmlinuz-6.14.0-10-generic 223s Found initrd image: /boot/initrd.img-6.14.0-10-generic 223s Warning: os-prober will not be executed to detect other bootable partitions. 223s Systems on them will not be added to the GRUB boot configuration. 223s Check GRUB_DISABLE_OS_PROBER documentation entry. 223s Adding boot menu entry for UEFI Firmware Settings ... 223s done 223s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 223s Removing linux-modules-extra-6.12.0-16-generic (6.12.0-16.16) ... 224s Removing linux-modules-6.12.0-16-generic (6.12.0-16.16) ... 224s Removing linux-tools-6.12.0-16-generic (6.12.0-16.16) ... 224s Removing linux-tools-6.12.0-16 (6.12.0-16.16) ... 224s Processing triggers for libc-bin (2.41-1ubuntu1) ... 224s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76972 files and directories currently installed.) 224s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 224s Purging configuration files for libpython3.12-minimal:amd64 (3.12.9-1) ... 224s Purging configuration files for linux-modules-extra-6.12.0-16-generic (6.12.0-16.16) ... 224s Purging configuration files for linux-modules-6.12.0-16-generic (6.12.0-16.16) ... 224s dpkg: warning: while removing linux-modules-6.12.0-16-generic, directory '/lib/modules/6.12.0-16-generic' not empty so not removed 224s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 224s Purging configuration files for linux-image-6.12.0-16-generic (6.12.0-16.16) ... 224s rmdir: failed to remove '/lib/modules/6.12.0-16-generic': Directory not empty 225s autopkgtest [19:07:56]: upgrading testbed (apt dist-upgrade and autopurge) 225s Reading package lists... 225s Building dependency tree... 225s Reading state information... 225s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 225s Starting 2 pkgProblemResolver with broken count: 0 225s Done 226s Entering ResolveByKeep 226s 226s Calculating upgrade... 226s The following packages will be upgraded: 226s libc-bin libc-dev-bin libc6 libc6-dev locales 226s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 226s Need to get 10.5 MB of archives. 226s After this operation, 1024 B of additional disk space will be used. 226s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6-dev amd64 2.41-1ubuntu2 [2183 kB] 227s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-dev-bin amd64 2.41-1ubuntu2 [24.7 kB] 227s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6 amd64 2.41-1ubuntu2 [3327 kB] 227s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-bin amd64 2.41-1ubuntu2 [700 kB] 227s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 locales all 2.41-1ubuntu2 [4246 kB] 228s Preconfiguring packages ... 228s Fetched 10.5 MB in 1s (6997 kB/s) 228s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 228s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_amd64.deb ... 228s Unpacking libc6-dev:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 228s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_amd64.deb ... 228s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 228s Preparing to unpack .../libc6_2.41-1ubuntu2_amd64.deb ... 228s Unpacking libc6:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 229s Setting up libc6:amd64 (2.41-1ubuntu2) ... 229s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 229s Preparing to unpack .../libc-bin_2.41-1ubuntu2_amd64.deb ... 229s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 229s Setting up libc-bin (2.41-1ubuntu2) ... 229s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 229s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 229s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 229s Setting up locales (2.41-1ubuntu2) ... 230s Generating locales (this might take a while)... 231s en_US.UTF-8... done 231s Generation complete. 231s Setting up libc-dev-bin (2.41-1ubuntu2) ... 231s Setting up libc6-dev:amd64 (2.41-1ubuntu2) ... 231s Processing triggers for man-db (2.13.0-1) ... 232s Processing triggers for systemd (257.3-1ubuntu3) ... 232s Reading package lists... 233s Building dependency tree... 233s Reading state information... 233s Starting pkgProblemResolver with broken count: 0 233s Starting 2 pkgProblemResolver with broken count: 0 233s Done 233s Solving dependencies... 233s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 234s autopkgtest [19:08:05]: rebooting testbed after setup commands that affected boot 257s autopkgtest [19:08:28]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 16:07:00 UTC 2025 259s autopkgtest [19:08:30]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-bsseq 261s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-bsseq 1.42.0+dfsg-2 (dsc) [2530 B] 261s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-bsseq 1.42.0+dfsg-2 (tar) [2231 kB] 261s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-bsseq 1.42.0+dfsg-2 (diff) [5832 B] 261s gpgv: Signature made Mon Jan 13 22:20:12 2025 UTC 261s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 261s gpgv: issuer "crusoe@debian.org" 261s gpgv: Can't check signature: No public key 261s dpkg-source: warning: cannot verify inline signature for ./r-bioc-bsseq_1.42.0+dfsg-2.dsc: no acceptable signature found 261s autopkgtest [19:08:32]: testing package r-bioc-bsseq version 1.42.0+dfsg-2 262s autopkgtest [19:08:33]: build not needed 266s autopkgtest [19:08:37]: test pkg-r-autopkgtest: preparing testbed 266s Reading package lists... 266s Building dependency tree... 266s Reading state information... 267s Starting pkgProblemResolver with broken count: 0 267s Starting 2 pkgProblemResolver with broken count: 0 267s Done 267s The following NEW packages will be installed: 267s build-essential comerr-dev cpp cpp-14 cpp-14-x86-64-linux-gnu 267s cpp-x86-64-linux-gnu dctrl-tools fontconfig fontconfig-config 267s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 267s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-14 267s g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 267s gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-14 267s gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu hdf5-helpers 267s icu-devtools javascript-common krb5-multidev libaec-dev libaec0 libasan8 267s libbibtex-parser-perl libblas-dev libblas3 libblosc1 libboost-dev 267s libboost1.83-dev libbrotli-dev libbz2-dev libcairo2 libcc1-0 267s libcurl4-openssl-dev libdatrie1 libdeflate-dev libdeflate0 libevent-2.1-7t64 267s libfontconfig1 libgcc-14-dev libgfortran-14-dev libgfortran5 libgmp-dev 267s libgmpxx4ldbl libgnutls-dane0t64 libgnutls-openssl27t64 libgnutls28-dev 267s libgomp1 libgraphite2-3 libgssrpc4t64 libharfbuzz0b libhdf5-310 267s libhdf5-cpp-310 libhdf5-dev libhdf5-fortran-310 libhdf5-hl-310 267s libhdf5-hl-cpp-310 libhdf5-hl-fortran-310 libhnswlib-dev libhwasan0 libice6 267s libicu-dev libidn2-dev libio-string-perl libisl23 libitm1 libjbig0 267s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 267s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 267s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 267s libjs-jquery-ui libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js 267s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 267s libjs-twitter-bootstrap-datepicker libkadm5clnt-mit12 libkadm5srv-mit12 267s libkdb5-10t64 libkpathsea6 libkrb5-dev liblapack-dev liblapack3 267s liblatex-tounicode-perl libldap-dev liblerc4 liblsan0 liblua5.4-0 267s liblzma-dev libmpc3 libmpfi0 libncurses-dev libnghttp2-dev libp11-kit-dev 267s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 267s libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 267s libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libpsl-dev libptexenc1 267s libquadmath0 libreadline-dev librtmp-dev libsharpyuv0 libsm6 libsnappy1v5 267s libssh2-1-dev libssl-dev libstdc++-14-dev libsynctex2 libsz2 libtasn1-6-dev 267s libtcl8.6 libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 267s libtirpc-dev libtk8.6 libtsan2 libubsan1 libunbound8 libwebp7 libxaw7 267s libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1 267s libxss1 libxt6t64 libzstd-dev libzzip-0-13t64 littler nettle-dev 267s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 267s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 267s r-bioc-assorthead r-bioc-beachmat r-bioc-biobase r-bioc-biocgenerics 267s r-bioc-biocio r-bioc-biocparallel r-bioc-biocstyle r-bioc-biocversion 267s r-bioc-biostrings r-bioc-bsgenome r-bioc-bsseq r-bioc-delayedarray 267s r-bioc-delayedmatrixstats r-bioc-genomeinfodb r-bioc-genomeinfodbdata 267s r-bioc-genomicalignments r-bioc-genomicranges r-bioc-hdf5array 267s r-bioc-iranges r-bioc-limma r-bioc-matrixgenerics r-bioc-rhdf5 267s r-bioc-rhdf5filters r-bioc-rhdf5lib r-bioc-rhtslib r-bioc-rsamtools 267s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 267s r-bioc-sparsematrixstats r-bioc-summarizedexperiment r-bioc-ucsc.utils 267s r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-backports 267s r-cran-base64enc r-cran-base64url r-cran-batchtools r-cran-bh 267s r-cran-biocmanager r-cran-bitops r-cran-bookdown r-cran-brew r-cran-brio 267s r-cran-bslib r-cran-cachem r-cran-callr r-cran-checkmate r-cran-cli 267s r-cran-codetools r-cran-colorspace r-cran-commonmark r-cran-cpp11 267s r-cran-crayon r-cran-curl r-cran-data.table r-cran-desc r-cran-diffobj 267s r-cran-digest r-cran-doparallel r-cran-evaluate r-cran-farver r-cran-fastmap 267s r-cran-fontawesome r-cran-foreach r-cran-formatr r-cran-fs 267s r-cran-futile.logger r-cran-futile.options r-cran-glue r-cran-gtools 267s r-cran-highr r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr 267s r-cran-iterators r-cran-jquerylib r-cran-jsonlite r-cran-knitr 267s r-cran-labeling r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lifecycle 267s r-cran-littler r-cran-locfit r-cran-magrittr r-cran-matrix 267s r-cran-matrixstats r-cran-memoise r-cran-mime r-cran-munsell r-cran-openssl 267s r-cran-permute r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 267s r-cran-pkgload r-cran-praise r-cran-prettyunits r-cran-processx 267s r-cran-progress r-cran-promises r-cran-ps r-cran-r.methodss3 r-cran-r.oo 267s r-cran-r.utils r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp 267s r-cran-rcurl r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown 267s r-cran-rprojroot r-cran-sass r-cran-scales r-cran-shiny r-cran-snow 267s r-cran-sourcetools r-cran-statmod r-cran-stringi r-cran-sys r-cran-testthat 267s r-cran-tinytex r-cran-vctrs r-cran-viridislite r-cran-waldo r-cran-withr 267s r-cran-xfun r-cran-xml r-cran-xtable r-cran-yaml t1utils tex-common 267s texlive-base texlive-bibtex-extra texlive-binaries texlive-latex-base unzip 267s x11-common xdg-utils zip zlib1g-dev 267s 0 upgraded, 332 newly installed, 0 to remove and 0 not upgraded. 267s Need to get 469 MB of archives. 267s After this operation, 1443 MB of additional disk space will be used. 267s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 268s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 268s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [11.9 MB] 269s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-17ubuntu3 [1030 B] 269s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [5586 B] 269s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.2.0-1ubuntu1 [22.4 kB] 269s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 15-20250222-0ubuntu1 [47.0 kB] 269s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 15-20250222-0ubuntu1 [148 kB] 269s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 15-20250222-0ubuntu1 [28.6 kB] 269s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 15-20250222-0ubuntu1 [3055 kB] 269s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 15-20250222-0ubuntu1 [1355 kB] 269s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 15-20250222-0ubuntu1 [2756 kB] 270s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 15-20250222-0ubuntu1 [1205 kB] 270s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 15-20250222-0ubuntu1 [1677 kB] 270s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 15-20250222-0ubuntu1 [152 kB] 270s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-17ubuntu3 [2816 kB] 270s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [23.3 MB] 273s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-17ubuntu3 [536 kB] 273s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1208 B] 273s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.2.0-1ubuntu1 [5004 B] 273s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-17ubuntu3 [2486 kB] 273s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [13.4 MB] 274s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-17ubuntu3 [21.8 kB] 274s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [968 B] 274s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.2.0-1ubuntu1 [1100 B] 274s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 274s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 dctrl-tools amd64 2.24-3build3 [106 kB] 275s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 275s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 275s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-2ubuntu1 [37.4 kB] 275s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-2ubuntu1 [164 kB] 275s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-2ubuntu1 [180 kB] 275s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 275s Get:34 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 275s Get:35 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-lmodern all 2.005-1 [4799 kB] 275s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 275s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 15-20250222-0ubuntu1 [919 kB] 275s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran-14-dev amd64 14.2.0-17ubuntu3 [966 kB] 276s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [12.6 MB] 277s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14 amd64 14.2.0-17ubuntu3 [13.6 kB] 277s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1022 B] 277s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran amd64 4:14.2.0-1ubuntu1 [1174 B] 277s Get:43 http://ftpmaster.internal/ubuntu plucky/universe amd64 hdf5-helpers amd64 1.14.5+repack-3 [17.0 kB] 277s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 icu-devtools amd64 76.1-1ubuntu2 [237 kB] 277s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 12 [5216 B] 277s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 comerr-dev amd64 2.1-1.47.2-1ubuntu1 [44.9 kB] 277s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libgssrpc4t64 amd64 1.21.3-4ubuntu2 [58.1 kB] 277s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libkadm5clnt-mit12 amd64 1.21.3-4ubuntu2 [41.3 kB] 277s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libkdb5-10t64 amd64 1.21.3-4ubuntu2 [42.0 kB] 277s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libkadm5srv-mit12 amd64 1.21.3-4ubuntu2 [55.5 kB] 277s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 krb5-multidev amd64 1.21.3-4ubuntu2 [125 kB] 277s Get:52 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 277s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libio-string-perl all 1.08-4 [11.1 kB] 277s Get:54 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblatex-tounicode-perl all 0.55-1 [28.8 kB] 277s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 libbibtex-parser-perl all 1.05+dfsg-1 [16.5 kB] 277s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 277s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas-dev amd64 3.12.1-2 [338 kB] 277s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libsnappy1v5 amd64 1.2.1-1 [30.4 kB] 277s Get:59 http://ftpmaster.internal/ubuntu plucky/universe amd64 libblosc1 amd64 1.21.5+ds-1build1 [36.2 kB] 277s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost1.83-dev amd64 1.83.0-4.1ubuntu2 [10.7 MB] 278s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost-dev amd64 1.83.0.2ubuntu1 [4468 B] 278s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libbrotli-dev amd64 1.1.0-2build4 [381 kB] 278s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 libbz2-dev amd64 1.0.8-6 [33.8 kB] 278s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 278s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 278s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 278s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 278s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 278s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 libidn2-dev amd64 2.3.7-2build2 [120 kB] 278s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 libkrb5-dev amd64 1.21.3-4ubuntu2 [11.9 kB] 278s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libldap-dev amd64 2.6.9+dfsg-1~exp2ubuntu1 [335 kB] 278s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 libpkgconf3 amd64 1.8.1-4 [32.3 kB] 278s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf-bin amd64 1.8.1-4 [21.6 kB] 278s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf amd64 1.8.1-4 [16.8 kB] 278s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libnghttp2-dev amd64 1.64.0-1 [123 kB] 278s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libpsl-dev amd64 0.21.2-1.1build1 [76.4 kB] 278s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-3ubuntu1 [10.0 kB] 278s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-3ubuntu1 [341 kB] 278s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10 [144 kB] 278s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 libunbound8 amd64 1.22.0-1ubuntu1 [519 kB] 278s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 libgnutls-dane0t64 amd64 3.8.9-2ubuntu2 [24.4 kB] 278s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 libgnutls-openssl27t64 amd64 3.8.9-2ubuntu2 [24.6 kB] 278s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 libp11-kit-dev amd64 0.25.5-2ubuntu3 [23.5 kB] 278s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 libtasn1-6-dev amd64 4.20.0-2 [98.1 kB] 278s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 nettle-dev amd64 3.10.1-1 [1187 kB] 279s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libgnutls28-dev amd64 3.8.9-2ubuntu2 [1118 kB] 279s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 279s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-2build7 [66.7 kB] 279s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libssl-dev amd64 3.4.1-1ubuntu1 [2873 kB] 279s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 libssh2-1-dev amd64 1.11.1-1 [292 kB] 279s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 libzstd-dev amd64 1.5.6+dfsg-2 [444 kB] 279s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4-openssl-dev amd64 8.12.1-3ubuntu1 [522 kB] 279s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 279s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB] 279s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate-dev amd64 1.23-1 [71.7 kB] 279s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 279s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB] 279s Get:98 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 279s Get:99 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-310 amd64 1.14.5+repack-3 [1519 kB] 280s Get:100 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-cpp-310 amd64 1.14.5+repack-3 [129 kB] 280s Get:101 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-fortran-310 amd64 1.14.5+repack-3 [108 kB] 280s Get:102 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-310 amd64 1.14.5+repack-3 [62.6 kB] 280s Get:103 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-fortran-310 amd64 1.14.5+repack-3 [32.4 kB] 280s Get:104 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-cpp-310 amd64 1.14.5+repack-3 [11.7 kB] 280s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 280s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8-dev amd64 2.1.5-3ubuntu2 [324 kB] 280s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 280s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 280s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 280s Get:110 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec-dev amd64 1.1.3-1 [19.8 kB] 280s Get:111 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-dev amd64 1.14.5+repack-3 [3505 kB] 281s Get:112 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhnswlib-dev all 0.8.0-1build3 [24.4 kB] 281s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 281s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 281s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libicu-dev amd64 76.1-1ubuntu2 [12.6 MB] 282s Get:116 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 282s Get:117 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 282s Get:118 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 282s Get:119 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 282s Get:120 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 282s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 282s Get:122 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 282s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 282s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 282s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 282s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 282s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 282s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 282s Get:129 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 282s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 282s Get:131 http://ftpmaster.internal/ubuntu plucky/main amd64 libkpathsea6 amd64 2024.20240313.70630+ds-5build2 [67.0 kB] 282s Get:132 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 282s Get:133 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack-dev amd64 3.12.1-2 [6489 kB] 283s Get:134 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 283s Get:135 http://ftpmaster.internal/ubuntu plucky/main amd64 liblua5.4-0 amd64 5.4.7-1 [196 kB] 283s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 libmpfi0 amd64 1.5.4+ds-4 [35.5 kB] 283s Get:137 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses-dev amd64 6.5+20250216-2 [424 kB] 283s Get:138 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 283s Get:139 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 283s Get:140 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.56.2-1 [255 kB] 283s Get:141 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.56.2-1 [52.6 kB] 283s Get:142 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.56.2-1 [29.1 kB] 283s Get:143 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB] 283s Get:144 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB] 283s Get:145 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.45-1 [268 kB] 283s Get:146 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-32-0 amd64 10.45-1 [251 kB] 283s Get:147 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-posix3 amd64 10.45-1 [7204 B] 283s Get:148 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-dev amd64 10.45-1 [908 kB] 284s Get:149 http://ftpmaster.internal/ubuntu plucky/main amd64 libpng-dev amd64 1.6.47-1 [298 kB] 284s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 libpotrace0 amd64 1.16-2build1 [17.7 kB] 284s Get:151 http://ftpmaster.internal/ubuntu plucky/main amd64 libptexenc1 amd64 2024.20240313.70630+ds-5build2 [43.7 kB] 284s Get:152 http://ftpmaster.internal/ubuntu plucky/main amd64 libreadline-dev amd64 8.2-6 [184 kB] 284s Get:153 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 284s Get:154 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 284s Get:155 http://ftpmaster.internal/ubuntu plucky/main amd64 libsynctex2 amd64 2024.20240313.70630+ds-5build2 [62.5 kB] 284s Get:156 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB] 284s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 libteckit0 amd64 2.5.12+ds1-1 [411 kB] 284s Get:158 http://ftpmaster.internal/ubuntu plucky/main amd64 libtexlua53-5 amd64 2024.20240313.70630+ds-5build2 [145 kB] 284s Get:159 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 284s Get:160 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 284s Get:161 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 284s Get:162 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 284s Get:163 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 284s Get:164 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB] 284s Get:165 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 284s Get:166 http://ftpmaster.internal/ubuntu plucky/main amd64 libxmu6 amd64 2:1.1.3-3build2 [47.6 kB] 284s Get:167 http://ftpmaster.internal/ubuntu plucky/main amd64 libxpm4 amd64 1:3.5.17-1build2 [36.5 kB] 284s Get:168 http://ftpmaster.internal/ubuntu plucky/main amd64 libxaw7 amd64 2:1.0.16-1 [207 kB] 284s Get:169 http://ftpmaster.internal/ubuntu plucky/main amd64 libxi6 amd64 2:1.8.2-1 [32.4 kB] 284s Get:170 http://ftpmaster.internal/ubuntu plucky/universe amd64 libzzip-0-13t64 amd64 0.13.78+dfsg.1-0.1 [30.0 kB] 284s Get:171 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu2 [185 kB] 284s Get:172 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 284s Get:173 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 284s Get:174 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.3-1 [28.9 MB] 287s Get:175 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-2 [96.6 kB] 287s Get:176 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-2 [2554 B] 287s Get:177 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 287s Get:178 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 287s Get:179 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 287s Get:180 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 287s Get:181 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc amd64 3.1.11.1+ds-2 [27.2 MB] 290s Get:182 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma-dev amd64 5.6.4-1 [189 kB] 290s Get:183 http://ftpmaster.internal/ubuntu plucky/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3 [193 kB] 291s Get:184 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-dev all 4.4.3-1 [4176 B] 291s Get:185 http://ftpmaster.internal/ubuntu plucky/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 291s Get:186 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 291s Get:187 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-assorthead all 1.0.1+ds-2 [194 kB] 291s Get:188 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 291s Get:189 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrix amd64 1.7-3-1 [4349 kB] 292s Get:190 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixstats amd64 1.5.0-1 [542 kB] 292s Get:191 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 292s Get:192 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2065 kB] 292s Get:193 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-iranges amd64 2.40.1-2 [2310 kB] 292s Get:194 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-abind all 1.4-8-1 [66.9 kB] 292s Get:195 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB] 292s Get:196 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-s4arrays amd64 1.6.0+dfsg-2 [698 kB] 292s Get:197 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 292s Get:198 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-xvector amd64 0.46.0-2 [620 kB] 293s Get:199 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-sparsearray amd64 1.6.2+dfsg-1 [1392 kB] 293s Get:200 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-delayedarray amd64 0.32.0+dfsg-2 [2064 kB] 293s Get:201 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 293s Get:202 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.14-1 [1998 kB] 294s Get:203 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-beachmat amd64 2.22.0+ds-2 [976 kB] 294s Get:204 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biobase amd64 2.66.0-2 [2332 kB] 294s Get:205 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 294s Get:206 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-formatr all 1.14-2 [152 kB] 294s Get:207 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 294s Get:208 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 294s Get:209 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 294s Get:210 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 294s Get:211 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-codetools all 0.2-20-1 [90.5 kB] 294s Get:212 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bh all 1.84.0-1 [5962 B] 294s Get:213 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cpp11 all 0.5.2-1 [233 kB] 294s Get:214 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocparallel amd64 1.40.0-2 [1337 kB] 295s Get:215 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 295s Get:216 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB] 295s Get:217 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 295s Get:218 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.5-1 [1719 kB] 295s Get:219 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 295s Get:220 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 1.0.3-1 [114 kB] 295s Get:221 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xfun amd64 0.51+dfsg-1 [574 kB] 295s Get:222 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 295s Get:223 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB] 295s Get:224 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 295s Get:225 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 295s Get:226 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 295s Get:227 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 295s Get:228 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB] 295s Get:229 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB] 296s Get:230 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 296s Get:231 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 296s Get:232 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 296s Get:233 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 296s Get:234 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB] 296s Get:235 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB] 296s Get:236 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 296s Get:237 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 296s Get:238 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 296s Get:239 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 296s Get:240 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tinytex all 0.56-1 [148 kB] 296s Get:241 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-modernizr all 3.13.0-0.1 [101 kB] 296s Get:242 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB] 296s Get:243 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 296s Get:244 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB] 296s Get:245 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 296s Get:246 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 296s Get:247 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 296s Get:248 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 296s Get:249 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.2-2 [137 kB] 296s Get:250 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 296s Get:251 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 297s Get:252 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 297s Get:253 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bookdown all 0.42+dfsg-1 [1409 kB] 297s Get:254 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 297s Get:255 http://ftpmaster.internal/ubuntu plucky/universe amd64 tex-common all 6.19 [29.8 kB] 297s Get:256 http://ftpmaster.internal/ubuntu plucky/main amd64 t1utils amd64 1.41-4build3 [61.3 kB] 297s Get:257 http://ftpmaster.internal/ubuntu plucky/universe amd64 texlive-binaries amd64 2024.20240313.70630+ds-5build2 [9799 kB] 298s Get:258 http://ftpmaster.internal/ubuntu plucky/universe amd64 texlive-base all 2024.20250114-1 [22.5 MB] 300s Get:259 http://ftpmaster.internal/ubuntu plucky/universe amd64 texlive-latex-base all 2024.20250114-1 [1264 kB] 300s Get:260 http://ftpmaster.internal/ubuntu plucky/universe amd64 texlive-bibtex-extra all 2024.20250114-1 [79.5 MB] 306s Get:261 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocversion all 3.20.0-2 [11.1 kB] 306s Get:262 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocstyle all 2.34.0+dfsg-1 [451 kB] 306s Get:263 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-curl amd64 6.2.1+dfsg-1ubuntu1 [197 kB] 306s Get:264 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB] 306s Get:265 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB] 306s Get:266 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-openssl amd64 2.3.2+dfsg-1 [407 kB] 306s Get:267 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 306s Get:268 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 306s Get:269 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 308s Get:270 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 308s Get:271 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biostrings amd64 2.74.1+dfsg-2 [13.3 MB] 309s Get:272 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomicranges amd64 1.58.0+dfsg-2 [2083 kB] 309s Get:273 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xml amd64 3.99-0.18-1 [1748 kB] 309s Get:274 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bitops amd64 1.0-9-1 [30.3 kB] 309s Get:275 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rhtslib amd64 3.2.0+dfsg-2 [1499 kB] 310s Get:276 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rsamtools amd64 2.22.0+dfsg-2 [3745 kB] 310s Get:277 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 310s Get:278 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomicalignments amd64 1.42.0-2 [2165 kB] 310s Get:279 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcurl amd64 1.98-1.16+dfsg-1 [807 kB] 310s Get:280 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rjson amd64 0.2.23-1 [104 kB] 310s Get:281 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-restfulr amd64 0.0.15-1 [380 kB] 310s Get:282 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rtracklayer amd64 1.66.0-2 [5227 kB] 311s Get:283 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-bsgenome all 1.74.0-2 [7001 kB] 311s Get:284 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB] 312s Get:285 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 312s Get:286 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colorspace amd64 2.1-1+dfsg-1 [1563 kB] 312s Get:287 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-munsell all 0.5.1-1 [213 kB] 312s Get:288 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 312s Get:289 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridislite all 0.4.2-2 [1088 kB] 312s Get:290 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scales all 1.3.0-1 [603 kB] 312s Get:291 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-locfit amd64 1.5-9.12-1 [552 kB] 312s Get:292 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtools amd64 3.9.5-1 [340 kB] 312s Get:293 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-data.table amd64 1.17.0+dfsg-1 [2168 kB] 312s Get:294 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 312s Get:295 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.oo all 1.27.0-1 [979 kB] 312s Get:296 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r.utils all 2.13.0-1 [1423 kB] 312s Get:297 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-sparsematrixstats amd64 1.18.0+dfsg-2 [877 kB] 312s Get:298 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-delayedmatrixstats all 1.28.1+ds-1 [502 kB] 312s Get:299 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-permute all 0.9-7-1 [228 kB] 312s Get:300 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-statmod amd64 1.5.0-1 [295 kB] 313s Get:301 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-limma amd64 3.62.2+dfsg-1 [1969 kB] 313s Get:302 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rhdf5lib amd64 1.28.0+dfsg-2build1 [97.4 kB] 313s Get:303 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rhdf5filters amd64 1.18.0+dfsg-2 [137 kB] 313s Get:304 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rhdf5 amd64 2.50.2+dfsg-1build1 [822 kB] 313s Get:305 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-hdf5array amd64 1.34.0-2build1 [8792 kB] 314s Get:306 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-bsseq amd64 1.42.0+dfsg-2 [3062 kB] 315s Get:307 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-backports amd64 1.5.0-2 [121 kB] 315s Get:308 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64url amd64 1.4-2build1 [26.5 kB] 315s Get:309 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-brew all 1.0-10-1 [77.7 kB] 315s Get:310 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-checkmate amd64 2.3.2-1 [706 kB] 315s Get:311 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 315s Get:312 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 315s Get:313 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-hms all 1.1.3-1 [96.5 kB] 315s Get:314 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-prettyunits all 1.2.0-1 [162 kB] 315s Get:315 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-progress all 1.2.3-1 [91.9 kB] 315s Get:316 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringi amd64 1.8.4-1build1 [927 kB] 315s Get:317 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-batchtools amd64 0.9.17+dfsg-1 [712 kB] 315s Get:318 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 315s Get:319 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ps amd64 1.9.0-1 [408 kB] 315s Get:320 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-processx amd64 3.8.6-1 [365 kB] 315s Get:321 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 315s Get:322 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 315s Get:323 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 315s Get:324 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-iterators all 1.0.14-1 [336 kB] 315s Get:325 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-foreach all 1.5.2-1 [124 kB] 315s Get:326 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-doparallel all 1.0.17-1 [189 kB] 315s Get:327 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgbuild all 1.4.6-1 [213 kB] 315s Get:328 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rprojroot all 2.0.4-2 [125 kB] 316s Get:329 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgload all 1.4.0-1 [247 kB] 316s Get:330 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 316s Get:331 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-waldo all 0.6.1-2 [150 kB] 316s Get:332 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-testthat amd64 3.2.3-1 [1651 kB] 316s Preconfiguring packages ... 316s Fetched 469 MB in 48s (9674 kB/s) 317s Selecting previously unselected package libisl23:amd64. 317s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 317s Preparing to unpack .../000-libisl23_0.27-1_amd64.deb ... 317s Unpacking libisl23:amd64 (0.27-1) ... 317s Selecting previously unselected package libmpc3:amd64. 317s Preparing to unpack .../001-libmpc3_1.3.1-1build2_amd64.deb ... 317s Unpacking libmpc3:amd64 (1.3.1-1build2) ... 317s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 317s Preparing to unpack .../002-cpp-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 317s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 317s Selecting previously unselected package cpp-14. 317s Preparing to unpack .../003-cpp-14_14.2.0-17ubuntu3_amd64.deb ... 317s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 317s Selecting previously unselected package cpp-x86-64-linux-gnu. 317s Preparing to unpack .../004-cpp-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 317s Unpacking cpp-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 317s Selecting previously unselected package cpp. 317s Preparing to unpack .../005-cpp_4%3a14.2.0-1ubuntu1_amd64.deb ... 317s Unpacking cpp (4:14.2.0-1ubuntu1) ... 317s Selecting previously unselected package libcc1-0:amd64. 317s Preparing to unpack .../006-libcc1-0_15-20250222-0ubuntu1_amd64.deb ... 317s Unpacking libcc1-0:amd64 (15-20250222-0ubuntu1) ... 317s Selecting previously unselected package libgomp1:amd64. 317s Preparing to unpack .../007-libgomp1_15-20250222-0ubuntu1_amd64.deb ... 317s Unpacking libgomp1:amd64 (15-20250222-0ubuntu1) ... 317s Selecting previously unselected package libitm1:amd64. 317s Preparing to unpack .../008-libitm1_15-20250222-0ubuntu1_amd64.deb ... 317s Unpacking libitm1:amd64 (15-20250222-0ubuntu1) ... 317s Selecting previously unselected package libasan8:amd64. 317s Preparing to unpack .../009-libasan8_15-20250222-0ubuntu1_amd64.deb ... 317s Unpacking libasan8:amd64 (15-20250222-0ubuntu1) ... 317s Selecting previously unselected package liblsan0:amd64. 317s Preparing to unpack .../010-liblsan0_15-20250222-0ubuntu1_amd64.deb ... 317s Unpacking liblsan0:amd64 (15-20250222-0ubuntu1) ... 317s Selecting previously unselected package libtsan2:amd64. 317s Preparing to unpack .../011-libtsan2_15-20250222-0ubuntu1_amd64.deb ... 317s Unpacking libtsan2:amd64 (15-20250222-0ubuntu1) ... 317s Selecting previously unselected package libubsan1:amd64. 317s Preparing to unpack .../012-libubsan1_15-20250222-0ubuntu1_amd64.deb ... 317s Unpacking libubsan1:amd64 (15-20250222-0ubuntu1) ... 317s Selecting previously unselected package libhwasan0:amd64. 317s Preparing to unpack .../013-libhwasan0_15-20250222-0ubuntu1_amd64.deb ... 317s Unpacking libhwasan0:amd64 (15-20250222-0ubuntu1) ... 317s Selecting previously unselected package libquadmath0:amd64. 317s Preparing to unpack .../014-libquadmath0_15-20250222-0ubuntu1_amd64.deb ... 318s Unpacking libquadmath0:amd64 (15-20250222-0ubuntu1) ... 318s Selecting previously unselected package libgcc-14-dev:amd64. 318s Preparing to unpack .../015-libgcc-14-dev_14.2.0-17ubuntu3_amd64.deb ... 318s Unpacking libgcc-14-dev:amd64 (14.2.0-17ubuntu3) ... 318s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 318s Preparing to unpack .../016-gcc-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 318s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 318s Selecting previously unselected package gcc-14. 318s Preparing to unpack .../017-gcc-14_14.2.0-17ubuntu3_amd64.deb ... 318s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 318s Selecting previously unselected package gcc-x86-64-linux-gnu. 318s Preparing to unpack .../018-gcc-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 318s Unpacking gcc-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 318s Selecting previously unselected package gcc. 318s Preparing to unpack .../019-gcc_4%3a14.2.0-1ubuntu1_amd64.deb ... 318s Unpacking gcc (4:14.2.0-1ubuntu1) ... 318s Selecting previously unselected package libstdc++-14-dev:amd64. 318s Preparing to unpack .../020-libstdc++-14-dev_14.2.0-17ubuntu3_amd64.deb ... 318s Unpacking libstdc++-14-dev:amd64 (14.2.0-17ubuntu3) ... 318s Selecting previously unselected package g++-14-x86-64-linux-gnu. 318s Preparing to unpack .../021-g++-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 318s Unpacking g++-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 318s Selecting previously unselected package g++-14. 318s Preparing to unpack .../022-g++-14_14.2.0-17ubuntu3_amd64.deb ... 318s Unpacking g++-14 (14.2.0-17ubuntu3) ... 318s Selecting previously unselected package g++-x86-64-linux-gnu. 318s Preparing to unpack .../023-g++-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 318s Unpacking g++-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 318s Selecting previously unselected package g++. 319s Preparing to unpack .../024-g++_4%3a14.2.0-1ubuntu1_amd64.deb ... 319s Unpacking g++ (4:14.2.0-1ubuntu1) ... 319s Selecting previously unselected package build-essential. 319s Preparing to unpack .../025-build-essential_12.10ubuntu1_amd64.deb ... 319s Unpacking build-essential (12.10ubuntu1) ... 319s Selecting previously unselected package dctrl-tools. 319s Preparing to unpack .../026-dctrl-tools_2.24-3build3_amd64.deb ... 319s Unpacking dctrl-tools (2.24-3build3) ... 319s Selecting previously unselected package fonts-dejavu-mono. 319s Preparing to unpack .../027-fonts-dejavu-mono_2.37-8_all.deb ... 319s Unpacking fonts-dejavu-mono (2.37-8) ... 319s Selecting previously unselected package fonts-dejavu-core. 319s Preparing to unpack .../028-fonts-dejavu-core_2.37-8_all.deb ... 319s Unpacking fonts-dejavu-core (2.37-8) ... 319s Selecting previously unselected package fontconfig-config. 319s Preparing to unpack .../029-fontconfig-config_2.15.0-2ubuntu1_amd64.deb ... 319s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 319s Selecting previously unselected package libfontconfig1:amd64. 319s Preparing to unpack .../030-libfontconfig1_2.15.0-2ubuntu1_amd64.deb ... 319s Unpacking libfontconfig1:amd64 (2.15.0-2ubuntu1) ... 319s Selecting previously unselected package fontconfig. 319s Preparing to unpack .../031-fontconfig_2.15.0-2ubuntu1_amd64.deb ... 319s Unpacking fontconfig (2.15.0-2ubuntu1) ... 319s Selecting previously unselected package fonts-font-awesome. 319s Preparing to unpack .../032-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 319s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 319s Selecting previously unselected package fonts-glyphicons-halflings. 319s Preparing to unpack .../033-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 319s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 319s Selecting previously unselected package fonts-lmodern. 319s Preparing to unpack .../034-fonts-lmodern_2.005-1_all.deb ... 319s Unpacking fonts-lmodern (2.005-1) ... 319s Selecting previously unselected package fonts-mathjax. 319s Preparing to unpack .../035-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 319s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 319s Selecting previously unselected package libgfortran5:amd64. 319s Preparing to unpack .../036-libgfortran5_15-20250222-0ubuntu1_amd64.deb ... 319s Unpacking libgfortran5:amd64 (15-20250222-0ubuntu1) ... 319s Selecting previously unselected package libgfortran-14-dev:amd64. 319s Preparing to unpack .../037-libgfortran-14-dev_14.2.0-17ubuntu3_amd64.deb ... 319s Unpacking libgfortran-14-dev:amd64 (14.2.0-17ubuntu3) ... 319s Selecting previously unselected package gfortran-14-x86-64-linux-gnu. 319s Preparing to unpack .../038-gfortran-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 319s Unpacking gfortran-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 320s Selecting previously unselected package gfortran-14. 320s Preparing to unpack .../039-gfortran-14_14.2.0-17ubuntu3_amd64.deb ... 320s Unpacking gfortran-14 (14.2.0-17ubuntu3) ... 320s Selecting previously unselected package gfortran-x86-64-linux-gnu. 320s Preparing to unpack .../040-gfortran-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 320s Unpacking gfortran-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 320s Selecting previously unselected package gfortran. 320s Preparing to unpack .../041-gfortran_4%3a14.2.0-1ubuntu1_amd64.deb ... 320s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 320s Selecting previously unselected package hdf5-helpers. 320s Preparing to unpack .../042-hdf5-helpers_1.14.5+repack-3_amd64.deb ... 320s Unpacking hdf5-helpers (1.14.5+repack-3) ... 320s Selecting previously unselected package icu-devtools. 320s Preparing to unpack .../043-icu-devtools_76.1-1ubuntu2_amd64.deb ... 320s Unpacking icu-devtools (76.1-1ubuntu2) ... 320s Selecting previously unselected package javascript-common. 320s Preparing to unpack .../044-javascript-common_12_all.deb ... 320s Unpacking javascript-common (12) ... 320s Selecting previously unselected package comerr-dev:amd64. 320s Preparing to unpack .../045-comerr-dev_2.1-1.47.2-1ubuntu1_amd64.deb ... 320s Unpacking comerr-dev:amd64 (2.1-1.47.2-1ubuntu1) ... 320s Selecting previously unselected package libgssrpc4t64:amd64. 320s Preparing to unpack .../046-libgssrpc4t64_1.21.3-4ubuntu2_amd64.deb ... 320s Unpacking libgssrpc4t64:amd64 (1.21.3-4ubuntu2) ... 320s Selecting previously unselected package libkadm5clnt-mit12:amd64. 320s Preparing to unpack .../047-libkadm5clnt-mit12_1.21.3-4ubuntu2_amd64.deb ... 320s Unpacking libkadm5clnt-mit12:amd64 (1.21.3-4ubuntu2) ... 320s Selecting previously unselected package libkdb5-10t64:amd64. 320s Preparing to unpack .../048-libkdb5-10t64_1.21.3-4ubuntu2_amd64.deb ... 320s Unpacking libkdb5-10t64:amd64 (1.21.3-4ubuntu2) ... 320s Selecting previously unselected package libkadm5srv-mit12:amd64. 320s Preparing to unpack .../049-libkadm5srv-mit12_1.21.3-4ubuntu2_amd64.deb ... 320s Unpacking libkadm5srv-mit12:amd64 (1.21.3-4ubuntu2) ... 320s Selecting previously unselected package krb5-multidev:amd64. 320s Preparing to unpack .../050-krb5-multidev_1.21.3-4ubuntu2_amd64.deb ... 320s Unpacking krb5-multidev:amd64 (1.21.3-4ubuntu2) ... 320s Selecting previously unselected package libaec0:amd64. 320s Preparing to unpack .../051-libaec0_1.1.3-1_amd64.deb ... 320s Unpacking libaec0:amd64 (1.1.3-1) ... 320s Selecting previously unselected package libio-string-perl. 320s Preparing to unpack .../052-libio-string-perl_1.08-4_all.deb ... 320s Unpacking libio-string-perl (1.08-4) ... 320s Selecting previously unselected package liblatex-tounicode-perl. 320s Preparing to unpack .../053-liblatex-tounicode-perl_0.55-1_all.deb ... 320s Unpacking liblatex-tounicode-perl (0.55-1) ... 320s Selecting previously unselected package libbibtex-parser-perl. 320s Preparing to unpack .../054-libbibtex-parser-perl_1.05+dfsg-1_all.deb ... 320s Unpacking libbibtex-parser-perl (1.05+dfsg-1) ... 320s Selecting previously unselected package libblas3:amd64. 320s Preparing to unpack .../055-libblas3_3.12.1-2_amd64.deb ... 320s Unpacking libblas3:amd64 (3.12.1-2) ... 320s Selecting previously unselected package libblas-dev:amd64. 320s Preparing to unpack .../056-libblas-dev_3.12.1-2_amd64.deb ... 320s Unpacking libblas-dev:amd64 (3.12.1-2) ... 320s Selecting previously unselected package libsnappy1v5:amd64. 320s Preparing to unpack .../057-libsnappy1v5_1.2.1-1_amd64.deb ... 320s Unpacking libsnappy1v5:amd64 (1.2.1-1) ... 320s Selecting previously unselected package libblosc1:amd64. 320s Preparing to unpack .../058-libblosc1_1.21.5+ds-1build1_amd64.deb ... 320s Unpacking libblosc1:amd64 (1.21.5+ds-1build1) ... 320s Selecting previously unselected package libboost1.83-dev:amd64. 320s Preparing to unpack .../059-libboost1.83-dev_1.83.0-4.1ubuntu2_amd64.deb ... 320s Unpacking libboost1.83-dev:amd64 (1.83.0-4.1ubuntu2) ... 322s Selecting previously unselected package libboost-dev:amd64. 322s Preparing to unpack .../060-libboost-dev_1.83.0.2ubuntu1_amd64.deb ... 322s Unpacking libboost-dev:amd64 (1.83.0.2ubuntu1) ... 322s Selecting previously unselected package libbrotli-dev:amd64. 322s Preparing to unpack .../061-libbrotli-dev_1.1.0-2build4_amd64.deb ... 322s Unpacking libbrotli-dev:amd64 (1.1.0-2build4) ... 322s Selecting previously unselected package libbz2-dev:amd64. 322s Preparing to unpack .../062-libbz2-dev_1.0.8-6_amd64.deb ... 322s Unpacking libbz2-dev:amd64 (1.0.8-6) ... 322s Selecting previously unselected package libpixman-1-0:amd64. 322s Preparing to unpack .../063-libpixman-1-0_0.44.0-3_amd64.deb ... 322s Unpacking libpixman-1-0:amd64 (0.44.0-3) ... 322s Selecting previously unselected package libxcb-render0:amd64. 322s Preparing to unpack .../064-libxcb-render0_1.17.0-2_amd64.deb ... 322s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 322s Selecting previously unselected package libxcb-shm0:amd64. 322s Preparing to unpack .../065-libxcb-shm0_1.17.0-2_amd64.deb ... 322s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 322s Selecting previously unselected package libxrender1:amd64. 322s Preparing to unpack .../066-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 322s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 322s Selecting previously unselected package libcairo2:amd64. 322s Preparing to unpack .../067-libcairo2_1.18.2-2_amd64.deb ... 322s Unpacking libcairo2:amd64 (1.18.2-2) ... 322s Selecting previously unselected package libidn2-dev:amd64. 322s Preparing to unpack .../068-libidn2-dev_2.3.7-2build2_amd64.deb ... 322s Unpacking libidn2-dev:amd64 (2.3.7-2build2) ... 322s Selecting previously unselected package libkrb5-dev:amd64. 322s Preparing to unpack .../069-libkrb5-dev_1.21.3-4ubuntu2_amd64.deb ... 322s Unpacking libkrb5-dev:amd64 (1.21.3-4ubuntu2) ... 322s Selecting previously unselected package libldap-dev:amd64. 322s Preparing to unpack .../070-libldap-dev_2.6.9+dfsg-1~exp2ubuntu1_amd64.deb ... 322s Unpacking libldap-dev:amd64 (2.6.9+dfsg-1~exp2ubuntu1) ... 322s Selecting previously unselected package libpkgconf3:amd64. 322s Preparing to unpack .../071-libpkgconf3_1.8.1-4_amd64.deb ... 322s Unpacking libpkgconf3:amd64 (1.8.1-4) ... 322s Selecting previously unselected package pkgconf-bin. 322s Preparing to unpack .../072-pkgconf-bin_1.8.1-4_amd64.deb ... 322s Unpacking pkgconf-bin (1.8.1-4) ... 323s Selecting previously unselected package pkgconf:amd64. 323s Preparing to unpack .../073-pkgconf_1.8.1-4_amd64.deb ... 323s Unpacking pkgconf:amd64 (1.8.1-4) ... 323s Selecting previously unselected package libnghttp2-dev:amd64. 323s Preparing to unpack .../074-libnghttp2-dev_1.64.0-1_amd64.deb ... 323s Unpacking libnghttp2-dev:amd64 (1.64.0-1) ... 323s Selecting previously unselected package libpsl-dev:amd64. 323s Preparing to unpack .../075-libpsl-dev_0.21.2-1.1build1_amd64.deb ... 323s Unpacking libpsl-dev:amd64 (0.21.2-1.1build1) ... 323s Selecting previously unselected package libgmpxx4ldbl:amd64. 323s Preparing to unpack .../076-libgmpxx4ldbl_2%3a6.3.0+dfsg-3ubuntu1_amd64.deb ... 323s Unpacking libgmpxx4ldbl:amd64 (2:6.3.0+dfsg-3ubuntu1) ... 323s Selecting previously unselected package libgmp-dev:amd64. 323s Preparing to unpack .../077-libgmp-dev_2%3a6.3.0+dfsg-3ubuntu1_amd64.deb ... 323s Unpacking libgmp-dev:amd64 (2:6.3.0+dfsg-3ubuntu1) ... 323s Selecting previously unselected package libevent-2.1-7t64:amd64. 323s Preparing to unpack .../078-libevent-2.1-7t64_2.1.12-stable-10_amd64.deb ... 323s Unpacking libevent-2.1-7t64:amd64 (2.1.12-stable-10) ... 323s Selecting previously unselected package libunbound8:amd64. 323s Preparing to unpack .../079-libunbound8_1.22.0-1ubuntu1_amd64.deb ... 323s Unpacking libunbound8:amd64 (1.22.0-1ubuntu1) ... 323s Selecting previously unselected package libgnutls-dane0t64:amd64. 323s Preparing to unpack .../080-libgnutls-dane0t64_3.8.9-2ubuntu2_amd64.deb ... 323s Unpacking libgnutls-dane0t64:amd64 (3.8.9-2ubuntu2) ... 323s Selecting previously unselected package libgnutls-openssl27t64:amd64. 323s Preparing to unpack .../081-libgnutls-openssl27t64_3.8.9-2ubuntu2_amd64.deb ... 323s Unpacking libgnutls-openssl27t64:amd64 (3.8.9-2ubuntu2) ... 323s Selecting previously unselected package libp11-kit-dev:amd64. 323s Preparing to unpack .../082-libp11-kit-dev_0.25.5-2ubuntu3_amd64.deb ... 323s Unpacking libp11-kit-dev:amd64 (0.25.5-2ubuntu3) ... 323s Selecting previously unselected package libtasn1-6-dev:amd64. 323s Preparing to unpack .../083-libtasn1-6-dev_4.20.0-2_amd64.deb ... 323s Unpacking libtasn1-6-dev:amd64 (4.20.0-2) ... 323s Selecting previously unselected package nettle-dev:amd64. 323s Preparing to unpack .../084-nettle-dev_3.10.1-1_amd64.deb ... 323s Unpacking nettle-dev:amd64 (3.10.1-1) ... 323s Selecting previously unselected package libgnutls28-dev:amd64. 323s Preparing to unpack .../085-libgnutls28-dev_3.8.9-2ubuntu2_amd64.deb ... 323s Unpacking libgnutls28-dev:amd64 (3.8.9-2ubuntu2) ... 323s Selecting previously unselected package zlib1g-dev:amd64. 323s Preparing to unpack .../086-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ... 323s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 323s Selecting previously unselected package librtmp-dev:amd64. 323s Preparing to unpack .../087-librtmp-dev_2.4+20151223.gitfa8646d.1-2build7_amd64.deb ... 323s Unpacking librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-2build7) ... 323s Selecting previously unselected package libssl-dev:amd64. 323s Preparing to unpack .../088-libssl-dev_3.4.1-1ubuntu1_amd64.deb ... 323s Unpacking libssl-dev:amd64 (3.4.1-1ubuntu1) ... 323s Selecting previously unselected package libssh2-1-dev:amd64. 323s Preparing to unpack .../089-libssh2-1-dev_1.11.1-1_amd64.deb ... 323s Unpacking libssh2-1-dev:amd64 (1.11.1-1) ... 323s Selecting previously unselected package libzstd-dev:amd64. 323s Preparing to unpack .../090-libzstd-dev_1.5.6+dfsg-2_amd64.deb ... 323s Unpacking libzstd-dev:amd64 (1.5.6+dfsg-2) ... 323s Selecting previously unselected package libcurl4-openssl-dev:amd64. 323s Preparing to unpack .../091-libcurl4-openssl-dev_8.12.1-3ubuntu1_amd64.deb ... 323s Unpacking libcurl4-openssl-dev:amd64 (8.12.1-3ubuntu1) ... 323s Selecting previously unselected package libdatrie1:amd64. 323s Preparing to unpack .../092-libdatrie1_0.2.13-3build1_amd64.deb ... 323s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 323s Selecting previously unselected package libdeflate0:amd64. 323s Preparing to unpack .../093-libdeflate0_1.23-1_amd64.deb ... 323s Unpacking libdeflate0:amd64 (1.23-1) ... 323s Selecting previously unselected package libdeflate-dev:amd64. 323s Preparing to unpack .../094-libdeflate-dev_1.23-1_amd64.deb ... 323s Unpacking libdeflate-dev:amd64 (1.23-1) ... 323s Selecting previously unselected package libgraphite2-3:amd64. 323s Preparing to unpack .../095-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 323s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 323s Selecting previously unselected package libharfbuzz0b:amd64. 323s Preparing to unpack .../096-libharfbuzz0b_10.2.0-1_amd64.deb ... 323s Unpacking libharfbuzz0b:amd64 (10.2.0-1) ... 323s Selecting previously unselected package libsz2:amd64. 323s Preparing to unpack .../097-libsz2_1.1.3-1_amd64.deb ... 323s Unpacking libsz2:amd64 (1.1.3-1) ... 323s Selecting previously unselected package libhdf5-310:amd64. 323s Preparing to unpack .../098-libhdf5-310_1.14.5+repack-3_amd64.deb ... 323s Unpacking libhdf5-310:amd64 (1.14.5+repack-3) ... 323s Selecting previously unselected package libhdf5-cpp-310:amd64. 323s Preparing to unpack .../099-libhdf5-cpp-310_1.14.5+repack-3_amd64.deb ... 323s Unpacking libhdf5-cpp-310:amd64 (1.14.5+repack-3) ... 323s Selecting previously unselected package libhdf5-fortran-310:amd64. 323s Preparing to unpack .../100-libhdf5-fortran-310_1.14.5+repack-3_amd64.deb ... 323s Unpacking libhdf5-fortran-310:amd64 (1.14.5+repack-3) ... 324s Selecting previously unselected package libhdf5-hl-310:amd64. 324s Preparing to unpack .../101-libhdf5-hl-310_1.14.5+repack-3_amd64.deb ... 324s Unpacking libhdf5-hl-310:amd64 (1.14.5+repack-3) ... 324s Selecting previously unselected package libhdf5-hl-fortran-310:amd64. 324s Preparing to unpack .../102-libhdf5-hl-fortran-310_1.14.5+repack-3_amd64.deb ... 324s Unpacking libhdf5-hl-fortran-310:amd64 (1.14.5+repack-3) ... 324s Selecting previously unselected package libhdf5-hl-cpp-310:amd64. 324s Preparing to unpack .../103-libhdf5-hl-cpp-310_1.14.5+repack-3_amd64.deb ... 324s Unpacking libhdf5-hl-cpp-310:amd64 (1.14.5+repack-3) ... 324s Selecting previously unselected package libjpeg-turbo8:amd64. 324s Preparing to unpack .../104-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ... 324s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 324s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 324s Preparing to unpack .../105-libjpeg-turbo8-dev_2.1.5-3ubuntu2_amd64.deb ... 324s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-3ubuntu2) ... 324s Selecting previously unselected package libjpeg8:amd64. 324s Preparing to unpack .../106-libjpeg8_8c-2ubuntu11_amd64.deb ... 324s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 324s Selecting previously unselected package libjpeg8-dev:amd64. 324s Preparing to unpack .../107-libjpeg8-dev_8c-2ubuntu11_amd64.deb ... 324s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu11) ... 324s Selecting previously unselected package libjpeg-dev:amd64. 324s Preparing to unpack .../108-libjpeg-dev_8c-2ubuntu11_amd64.deb ... 324s Unpacking libjpeg-dev:amd64 (8c-2ubuntu11) ... 324s Selecting previously unselected package libaec-dev:amd64. 324s Preparing to unpack .../109-libaec-dev_1.1.3-1_amd64.deb ... 324s Unpacking libaec-dev:amd64 (1.1.3-1) ... 324s Selecting previously unselected package libhdf5-dev. 324s Preparing to unpack .../110-libhdf5-dev_1.14.5+repack-3_amd64.deb ... 324s Unpacking libhdf5-dev (1.14.5+repack-3) ... 324s Selecting previously unselected package libhnswlib-dev. 324s Preparing to unpack .../111-libhnswlib-dev_0.8.0-1build3_all.deb ... 324s Unpacking libhnswlib-dev (0.8.0-1build3) ... 324s Selecting previously unselected package x11-common. 324s Preparing to unpack .../112-x11-common_1%3a7.7+23ubuntu3_all.deb ... 324s Unpacking x11-common (1:7.7+23ubuntu3) ... 324s Selecting previously unselected package libice6:amd64. 324s Preparing to unpack .../113-libice6_2%3a1.1.1-1_amd64.deb ... 324s Unpacking libice6:amd64 (2:1.1.1-1) ... 324s Selecting previously unselected package libicu-dev:amd64. 324s Preparing to unpack .../114-libicu-dev_76.1-1ubuntu2_amd64.deb ... 324s Unpacking libicu-dev:amd64 (76.1-1ubuntu2) ... 324s Selecting previously unselected package libjs-bootstrap. 324s Preparing to unpack .../115-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 324s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 324s Selecting previously unselected package libjs-popper.js. 324s Preparing to unpack .../116-libjs-popper.js_1.16.1+ds-6_all.deb ... 324s Unpacking libjs-popper.js (1.16.1+ds-6) ... 324s Selecting previously unselected package libjs-bootstrap4. 324s Preparing to unpack .../117-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 324s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 324s Selecting previously unselected package libjs-d3. 324s Preparing to unpack .../118-libjs-d3_3.5.17-4_all.deb ... 324s Unpacking libjs-d3 (3.5.17-4) ... 324s Selecting previously unselected package libjs-es5-shim. 324s Preparing to unpack .../119-libjs-es5-shim_4.6.7-2_all.deb ... 324s Unpacking libjs-es5-shim (4.6.7-2) ... 324s Selecting previously unselected package libjs-highlight.js. 324s Preparing to unpack .../120-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 324s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 325s Selecting previously unselected package libjs-jquery. 325s Preparing to unpack .../121-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 325s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 325s Selecting previously unselected package libjs-jquery-datatables. 325s Preparing to unpack .../122-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 325s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 325s Selecting previously unselected package libjs-sifter.js. 325s Preparing to unpack .../123-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 325s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 325s Selecting previously unselected package libjs-microplugin.js. 325s Preparing to unpack .../124-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 325s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 325s Selecting previously unselected package libjs-jquery-selectize.js. 325s Preparing to unpack .../125-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 325s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 325s Selecting previously unselected package libjs-jquery-ui. 325s Preparing to unpack .../126-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 325s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 325s Selecting previously unselected package libjs-json. 325s Preparing to unpack .../127-libjs-json_0~20221030+~1.0.8-1_all.deb ... 325s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 325s Selecting previously unselected package libjs-lunr. 325s Preparing to unpack .../128-libjs-lunr_2.3.9~dfsg-2_all.deb ... 325s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 325s Selecting previously unselected package libjs-prettify. 325s Preparing to unpack .../129-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 325s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 325s Selecting previously unselected package libkpathsea6:amd64. 325s Preparing to unpack .../130-libkpathsea6_2024.20240313.70630+ds-5build2_amd64.deb ... 325s Unpacking libkpathsea6:amd64 (2024.20240313.70630+ds-5build2) ... 325s Selecting previously unselected package liblapack3:amd64. 325s Preparing to unpack .../131-liblapack3_3.12.1-2_amd64.deb ... 325s Unpacking liblapack3:amd64 (3.12.1-2) ... 325s Selecting previously unselected package liblapack-dev:amd64. 325s Preparing to unpack .../132-liblapack-dev_3.12.1-2_amd64.deb ... 325s Unpacking liblapack-dev:amd64 (3.12.1-2) ... 325s Selecting previously unselected package liblerc4:amd64. 325s Preparing to unpack .../133-liblerc4_4.0.0+ds-5ubuntu1_amd64.deb ... 325s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 325s Selecting previously unselected package liblua5.4-0:amd64. 325s Preparing to unpack .../134-liblua5.4-0_5.4.7-1_amd64.deb ... 325s Unpacking liblua5.4-0:amd64 (5.4.7-1) ... 325s Selecting previously unselected package libmpfi0:amd64. 325s Preparing to unpack .../135-libmpfi0_1.5.4+ds-4_amd64.deb ... 325s Unpacking libmpfi0:amd64 (1.5.4+ds-4) ... 325s Selecting previously unselected package libncurses-dev:amd64. 325s Preparing to unpack .../136-libncurses-dev_6.5+20250216-2_amd64.deb ... 325s Unpacking libncurses-dev:amd64 (6.5+20250216-2) ... 325s Selecting previously unselected package libthai-data. 325s Preparing to unpack .../137-libthai-data_0.1.29-2build1_all.deb ... 325s Unpacking libthai-data (0.1.29-2build1) ... 325s Selecting previously unselected package libthai0:amd64. 325s Preparing to unpack .../138-libthai0_0.1.29-2build1_amd64.deb ... 325s Unpacking libthai0:amd64 (0.1.29-2build1) ... 325s Selecting previously unselected package libpango-1.0-0:amd64. 325s Preparing to unpack .../139-libpango-1.0-0_1.56.2-1_amd64.deb ... 325s Unpacking libpango-1.0-0:amd64 (1.56.2-1) ... 325s Selecting previously unselected package libpangoft2-1.0-0:amd64. 325s Preparing to unpack .../140-libpangoft2-1.0-0_1.56.2-1_amd64.deb ... 325s Unpacking libpangoft2-1.0-0:amd64 (1.56.2-1) ... 325s Selecting previously unselected package libpangocairo-1.0-0:amd64. 325s Preparing to unpack .../141-libpangocairo-1.0-0_1.56.2-1_amd64.deb ... 325s Unpacking libpangocairo-1.0-0:amd64 (1.56.2-1) ... 325s Selecting previously unselected package libpaper2:amd64. 325s Preparing to unpack .../142-libpaper2_2.2.5-0.3_amd64.deb ... 325s Unpacking libpaper2:amd64 (2.2.5-0.3) ... 325s Selecting previously unselected package libpaper-utils. 325s Preparing to unpack .../143-libpaper-utils_2.2.5-0.3_amd64.deb ... 325s Unpacking libpaper-utils (2.2.5-0.3) ... 325s Selecting previously unselected package libpcre2-16-0:amd64. 325s Preparing to unpack .../144-libpcre2-16-0_10.45-1_amd64.deb ... 325s Unpacking libpcre2-16-0:amd64 (10.45-1) ... 325s Selecting previously unselected package libpcre2-32-0:amd64. 325s Preparing to unpack .../145-libpcre2-32-0_10.45-1_amd64.deb ... 325s Unpacking libpcre2-32-0:amd64 (10.45-1) ... 325s Selecting previously unselected package libpcre2-posix3:amd64. 325s Preparing to unpack .../146-libpcre2-posix3_10.45-1_amd64.deb ... 325s Unpacking libpcre2-posix3:amd64 (10.45-1) ... 326s Selecting previously unselected package libpcre2-dev:amd64. 326s Preparing to unpack .../147-libpcre2-dev_10.45-1_amd64.deb ... 326s Unpacking libpcre2-dev:amd64 (10.45-1) ... 326s Selecting previously unselected package libpng-dev:amd64. 326s Preparing to unpack .../148-libpng-dev_1.6.47-1_amd64.deb ... 326s Unpacking libpng-dev:amd64 (1.6.47-1) ... 326s Selecting previously unselected package libpotrace0:amd64. 326s Preparing to unpack .../149-libpotrace0_1.16-2build1_amd64.deb ... 326s Unpacking libpotrace0:amd64 (1.16-2build1) ... 326s Selecting previously unselected package libptexenc1:amd64. 326s Preparing to unpack .../150-libptexenc1_2024.20240313.70630+ds-5build2_amd64.deb ... 326s Unpacking libptexenc1:amd64 (2024.20240313.70630+ds-5build2) ... 326s Selecting previously unselected package libreadline-dev:amd64. 326s Preparing to unpack .../151-libreadline-dev_8.2-6_amd64.deb ... 326s Unpacking libreadline-dev:amd64 (8.2-6) ... 326s Selecting previously unselected package libsharpyuv0:amd64. 326s Preparing to unpack .../152-libsharpyuv0_1.5.0-0.1_amd64.deb ... 326s Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ... 326s Selecting previously unselected package libsm6:amd64. 326s Preparing to unpack .../153-libsm6_2%3a1.2.4-1_amd64.deb ... 326s Unpacking libsm6:amd64 (2:1.2.4-1) ... 326s Selecting previously unselected package libsynctex2:amd64. 326s Preparing to unpack .../154-libsynctex2_2024.20240313.70630+ds-5build2_amd64.deb ... 326s Unpacking libsynctex2:amd64 (2024.20240313.70630+ds-5build2) ... 326s Selecting previously unselected package libtcl8.6:amd64. 326s Preparing to unpack .../155-libtcl8.6_8.6.16+dfsg-1_amd64.deb ... 326s Unpacking libtcl8.6:amd64 (8.6.16+dfsg-1) ... 326s Selecting previously unselected package libteckit0:amd64. 326s Preparing to unpack .../156-libteckit0_2.5.12+ds1-1_amd64.deb ... 326s Unpacking libteckit0:amd64 (2.5.12+ds1-1) ... 326s Selecting previously unselected package libtexlua53-5:amd64. 326s Preparing to unpack .../157-libtexlua53-5_2024.20240313.70630+ds-5build2_amd64.deb ... 326s Unpacking libtexlua53-5:amd64 (2024.20240313.70630+ds-5build2) ... 326s Selecting previously unselected package libjbig0:amd64. 326s Preparing to unpack .../158-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 326s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 326s Selecting previously unselected package libwebp7:amd64. 326s Preparing to unpack .../159-libwebp7_1.5.0-0.1_amd64.deb ... 326s Unpacking libwebp7:amd64 (1.5.0-0.1) ... 326s Selecting previously unselected package libtiff6:amd64. 326s Preparing to unpack .../160-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ... 326s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 326s Selecting previously unselected package libxft2:amd64. 326s Preparing to unpack .../161-libxft2_2.3.6-1build1_amd64.deb ... 326s Unpacking libxft2:amd64 (2.3.6-1build1) ... 326s Selecting previously unselected package libxss1:amd64. 326s Preparing to unpack .../162-libxss1_1%3a1.2.3-1build3_amd64.deb ... 326s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 326s Selecting previously unselected package libtk8.6:amd64. 326s Preparing to unpack .../163-libtk8.6_8.6.16-1_amd64.deb ... 326s Unpacking libtk8.6:amd64 (8.6.16-1) ... 326s Selecting previously unselected package libxt6t64:amd64. 326s Preparing to unpack .../164-libxt6t64_1%3a1.2.1-1.2build1_amd64.deb ... 326s Unpacking libxt6t64:amd64 (1:1.2.1-1.2build1) ... 326s Selecting previously unselected package libxmu6:amd64. 326s Preparing to unpack .../165-libxmu6_2%3a1.1.3-3build2_amd64.deb ... 326s Unpacking libxmu6:amd64 (2:1.1.3-3build2) ... 326s Selecting previously unselected package libxpm4:amd64. 326s Preparing to unpack .../166-libxpm4_1%3a3.5.17-1build2_amd64.deb ... 326s Unpacking libxpm4:amd64 (1:3.5.17-1build2) ... 326s Selecting previously unselected package libxaw7:amd64. 326s Preparing to unpack .../167-libxaw7_2%3a1.0.16-1_amd64.deb ... 326s Unpacking libxaw7:amd64 (2:1.0.16-1) ... 326s Selecting previously unselected package libxi6:amd64. 326s Preparing to unpack .../168-libxi6_2%3a1.8.2-1_amd64.deb ... 326s Unpacking libxi6:amd64 (2:1.8.2-1) ... 326s Selecting previously unselected package libzzip-0-13t64:amd64. 326s Preparing to unpack .../169-libzzip-0-13t64_0.13.78+dfsg.1-0.1_amd64.deb ... 326s Unpacking libzzip-0-13t64:amd64 (0.13.78+dfsg.1-0.1) ... 326s Selecting previously unselected package zip. 326s Preparing to unpack .../170-zip_3.0-14ubuntu2_amd64.deb ... 326s Unpacking zip (3.0-14ubuntu2) ... 326s Selecting previously unselected package unzip. 326s Preparing to unpack .../171-unzip_6.0-28ubuntu6_amd64.deb ... 326s Unpacking unzip (6.0-28ubuntu6) ... 326s Selecting previously unselected package xdg-utils. 326s Preparing to unpack .../172-xdg-utils_1.2.1-2ubuntu1_all.deb ... 326s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 326s Selecting previously unselected package r-base-core. 326s Preparing to unpack .../173-r-base-core_4.4.3-1_amd64.deb ... 326s Unpacking r-base-core (4.4.3-1) ... 327s Selecting previously unselected package r-cran-littler. 327s Preparing to unpack .../174-r-cran-littler_0.3.20-2_amd64.deb ... 327s Unpacking r-cran-littler (0.3.20-2) ... 327s Selecting previously unselected package littler. 327s Preparing to unpack .../175-littler_0.3.20-2_all.deb ... 327s Unpacking littler (0.3.20-2) ... 327s Selecting previously unselected package node-bootstrap-sass. 327s Preparing to unpack .../176-node-bootstrap-sass_3.4.3-2_all.deb ... 327s Unpacking node-bootstrap-sass (3.4.3-2) ... 327s Selecting previously unselected package node-html5shiv. 327s Preparing to unpack .../177-node-html5shiv_3.7.3+dfsg-5_all.deb ... 327s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 327s Selecting previously unselected package node-normalize.css. 327s Preparing to unpack .../178-node-normalize.css_8.0.1-5_all.deb ... 327s Unpacking node-normalize.css (8.0.1-5) ... 327s Selecting previously unselected package pandoc-data. 327s Preparing to unpack .../179-pandoc-data_3.1.11.1-3build1_all.deb ... 327s Unpacking pandoc-data (3.1.11.1-3build1) ... 327s Selecting previously unselected package pandoc. 327s Preparing to unpack .../180-pandoc_3.1.11.1+ds-2_amd64.deb ... 327s Unpacking pandoc (3.1.11.1+ds-2) ... 328s Selecting previously unselected package liblzma-dev:amd64. 328s Preparing to unpack .../181-liblzma-dev_5.6.4-1_amd64.deb ... 328s Unpacking liblzma-dev:amd64 (5.6.4-1) ... 328s Selecting previously unselected package libtirpc-dev:amd64. 328s Preparing to unpack .../182-libtirpc-dev_1.3.4+ds-1.3_amd64.deb ... 328s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1.3) ... 328s Selecting previously unselected package r-base-dev. 328s Preparing to unpack .../183-r-base-dev_4.4.3-1_all.deb ... 328s Unpacking r-base-dev (4.4.3-1) ... 328s Selecting previously unselected package pkg-r-autopkgtest. 328s Preparing to unpack .../184-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 328s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 328s Selecting previously unselected package r-bioc-biocgenerics. 328s Preparing to unpack .../185-r-bioc-biocgenerics_0.52.0-2_all.deb ... 328s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 328s Selecting previously unselected package r-bioc-assorthead. 328s Preparing to unpack .../186-r-bioc-assorthead_1.0.1+ds-2_all.deb ... 328s Unpacking r-bioc-assorthead (1.0.1+ds-2) ... 328s Selecting previously unselected package r-cran-lattice. 328s Preparing to unpack .../187-r-cran-lattice_0.22-6-1_amd64.deb ... 328s Unpacking r-cran-lattice (0.22-6-1) ... 328s Selecting previously unselected package r-cran-matrix. 328s Preparing to unpack .../188-r-cran-matrix_1.7-3-1_amd64.deb ... 328s Unpacking r-cran-matrix (1.7-3-1) ... 328s Selecting previously unselected package r-cran-matrixstats. 328s Preparing to unpack .../189-r-cran-matrixstats_1.5.0-1_amd64.deb ... 328s Unpacking r-cran-matrixstats (1.5.0-1) ... 328s Selecting previously unselected package r-bioc-matrixgenerics. 328s Preparing to unpack .../190-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 328s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 328s Selecting previously unselected package r-bioc-s4vectors. 328s Preparing to unpack .../191-r-bioc-s4vectors_0.44.0+dfsg-2_amd64.deb ... 328s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 328s Selecting previously unselected package r-bioc-iranges. 328s Preparing to unpack .../192-r-bioc-iranges_2.40.1-2_amd64.deb ... 328s Unpacking r-bioc-iranges (2.40.1-2) ... 328s Selecting previously unselected package r-cran-abind. 328s Preparing to unpack .../193-r-cran-abind_1.4-8-1_all.deb ... 328s Unpacking r-cran-abind (1.4-8-1) ... 328s Selecting previously unselected package r-cran-crayon. 328s Preparing to unpack .../194-r-cran-crayon_1.5.3-1_all.deb ... 328s Unpacking r-cran-crayon (1.5.3-1) ... 328s Selecting previously unselected package r-bioc-s4arrays. 328s Preparing to unpack .../195-r-bioc-s4arrays_1.6.0+dfsg-2_amd64.deb ... 328s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 328s Selecting previously unselected package r-bioc-zlibbioc. 328s Preparing to unpack .../196-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 328s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 328s Selecting previously unselected package r-bioc-xvector. 328s Preparing to unpack .../197-r-bioc-xvector_0.46.0-2_amd64.deb ... 328s Unpacking r-bioc-xvector (0.46.0-2) ... 328s Selecting previously unselected package r-bioc-sparsearray. 328s Preparing to unpack .../198-r-bioc-sparsearray_1.6.2+dfsg-1_amd64.deb ... 328s Unpacking r-bioc-sparsearray (1.6.2+dfsg-1) ... 328s Selecting previously unselected package r-bioc-delayedarray. 328s Preparing to unpack .../199-r-bioc-delayedarray_0.32.0+dfsg-2_amd64.deb ... 328s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 329s Selecting previously unselected package r-cran-pkgkitten. 329s Preparing to unpack .../200-r-cran-pkgkitten_0.2.4-1_all.deb ... 329s Unpacking r-cran-pkgkitten (0.2.4-1) ... 329s Selecting previously unselected package r-cran-rcpp. 329s Preparing to unpack .../201-r-cran-rcpp_1.0.14-1_amd64.deb ... 329s Unpacking r-cran-rcpp (1.0.14-1) ... 329s Selecting previously unselected package r-bioc-beachmat. 329s Preparing to unpack .../202-r-bioc-beachmat_2.22.0+ds-2_amd64.deb ... 329s Unpacking r-bioc-beachmat (2.22.0+ds-2) ... 329s Selecting previously unselected package r-bioc-biobase. 329s Preparing to unpack .../203-r-bioc-biobase_2.66.0-2_amd64.deb ... 329s Unpacking r-bioc-biobase (2.66.0-2) ... 329s Selecting previously unselected package r-bioc-biocio. 329s Preparing to unpack .../204-r-bioc-biocio_1.16.0+dfsg-2_all.deb ... 329s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ... 329s Selecting previously unselected package r-cran-formatr. 329s Preparing to unpack .../205-r-cran-formatr_1.14-2_all.deb ... 329s Unpacking r-cran-formatr (1.14-2) ... 329s Selecting previously unselected package r-cran-lambda.r. 329s Preparing to unpack .../206-r-cran-lambda.r_1.2.4-2build1_all.deb ... 329s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 329s Selecting previously unselected package r-cran-futile.options. 329s Preparing to unpack .../207-r-cran-futile.options_1.0.1-3build1_all.deb ... 329s Unpacking r-cran-futile.options (1.0.1-3build1) ... 329s Selecting previously unselected package r-cran-futile.logger. 329s Preparing to unpack .../208-r-cran-futile.logger_1.4.3-4build1_all.deb ... 329s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 329s Selecting previously unselected package r-cran-snow. 329s Preparing to unpack .../209-r-cran-snow_1%3a0.4.4-2_all.deb ... 329s Unpacking r-cran-snow (1:0.4.4-2) ... 329s Selecting previously unselected package r-cran-codetools. 329s Preparing to unpack .../210-r-cran-codetools_0.2-20-1_all.deb ... 329s Unpacking r-cran-codetools (0.2-20-1) ... 329s Selecting previously unselected package r-cran-bh. 329s Preparing to unpack .../211-r-cran-bh_1.84.0-1_all.deb ... 329s Unpacking r-cran-bh (1.84.0-1) ... 329s Selecting previously unselected package r-cran-cpp11. 329s Preparing to unpack .../212-r-cran-cpp11_0.5.2-1_all.deb ... 329s Unpacking r-cran-cpp11 (0.5.2-1) ... 329s Selecting previously unselected package r-bioc-biocparallel. 329s Preparing to unpack .../213-r-bioc-biocparallel_1.40.0-2_amd64.deb ... 329s Unpacking r-bioc-biocparallel (1.40.0-2) ... 329s Selecting previously unselected package r-cran-base64enc. 329s Preparing to unpack .../214-r-cran-base64enc_0.1-3-3_amd64.deb ... 329s Unpacking r-cran-base64enc (0.1-3-3) ... 329s Selecting previously unselected package r-cran-digest. 329s Preparing to unpack .../215-r-cran-digest_0.6.37-1_amd64.deb ... 329s Unpacking r-cran-digest (0.6.37-1) ... 329s Selecting previously unselected package r-cran-fastmap. 329s Preparing to unpack .../216-r-cran-fastmap_1.2.0-1_amd64.deb ... 329s Unpacking r-cran-fastmap (1.2.0-1) ... 329s Selecting previously unselected package r-cran-rlang. 329s Preparing to unpack .../217-r-cran-rlang_1.1.5-1_amd64.deb ... 329s Unpacking r-cran-rlang (1.1.5-1) ... 329s Selecting previously unselected package r-cran-htmltools. 329s Preparing to unpack .../218-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 329s Unpacking r-cran-htmltools (0.5.8.1-1) ... 329s Selecting previously unselected package r-cran-evaluate. 329s Preparing to unpack .../219-r-cran-evaluate_1.0.3-1_all.deb ... 329s Unpacking r-cran-evaluate (1.0.3-1) ... 329s Selecting previously unselected package r-cran-xfun. 329s Preparing to unpack .../220-r-cran-xfun_0.51+dfsg-1_amd64.deb ... 329s Unpacking r-cran-xfun (0.51+dfsg-1) ... 329s Selecting previously unselected package r-cran-highr. 329s Preparing to unpack .../221-r-cran-highr_0.11+dfsg-1_all.deb ... 329s Unpacking r-cran-highr (0.11+dfsg-1) ... 329s Selecting previously unselected package r-cran-yaml. 329s Preparing to unpack .../222-r-cran-yaml_2.3.10-1_amd64.deb ... 329s Unpacking r-cran-yaml (2.3.10-1) ... 329s Selecting previously unselected package libjs-mathjax. 329s Preparing to unpack .../223-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 329s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 330s Selecting previously unselected package r-cran-knitr. 330s Preparing to unpack .../224-r-cran-knitr_1.49+dfsg-1_all.deb ... 330s Unpacking r-cran-knitr (1.49+dfsg-1) ... 330s Selecting previously unselected package r-cran-cachem. 330s Preparing to unpack .../225-r-cran-cachem_1.1.0-1_amd64.deb ... 330s Unpacking r-cran-cachem (1.1.0-1) ... 330s Selecting previously unselected package r-cran-jquerylib. 330s Preparing to unpack .../226-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 330s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 330s Selecting previously unselected package r-cran-jsonlite. 330s Preparing to unpack .../227-r-cran-jsonlite_1.9.1+dfsg-1_amd64.deb ... 330s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 330s Selecting previously unselected package r-cran-cli. 330s Preparing to unpack .../228-r-cran-cli_3.6.4-1_amd64.deb ... 330s Unpacking r-cran-cli (3.6.4-1) ... 330s Selecting previously unselected package r-cran-glue. 330s Preparing to unpack .../229-r-cran-glue_1.8.0-1_amd64.deb ... 330s Unpacking r-cran-glue (1.8.0-1) ... 330s Selecting previously unselected package r-cran-lifecycle. 330s Preparing to unpack .../230-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 330s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 330s Selecting previously unselected package r-cran-memoise. 331s Preparing to unpack .../231-r-cran-memoise_2.0.1-1_all.deb ... 331s Unpacking r-cran-memoise (2.0.1-1) ... 331s Selecting previously unselected package r-cran-mime. 331s Preparing to unpack .../232-r-cran-mime_0.12-2_amd64.deb ... 331s Unpacking r-cran-mime (0.12-2) ... 331s Selecting previously unselected package r-cran-fs. 331s Preparing to unpack .../233-r-cran-fs_1.6.5+dfsg-1_amd64.deb ... 331s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 331s Selecting previously unselected package r-cran-r6. 331s Preparing to unpack .../234-r-cran-r6_2.6.1-1_all.deb ... 331s Unpacking r-cran-r6 (2.6.1-1) ... 331s Selecting previously unselected package r-cran-rappdirs. 331s Preparing to unpack .../235-r-cran-rappdirs_0.3.3-1_amd64.deb ... 331s Unpacking r-cran-rappdirs (0.3.3-1) ... 331s Selecting previously unselected package r-cran-sass. 331s Preparing to unpack .../236-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 331s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 331s Selecting previously unselected package r-cran-bslib. 331s Preparing to unpack .../237-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 331s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 331s Selecting previously unselected package r-cran-fontawesome. 331s Preparing to unpack .../238-r-cran-fontawesome_0.5.3-1_all.deb ... 331s Unpacking r-cran-fontawesome (0.5.3-1) ... 331s Selecting previously unselected package r-cran-tinytex. 331s Preparing to unpack .../239-r-cran-tinytex_0.56-1_all.deb ... 331s Unpacking r-cran-tinytex (0.56-1) ... 331s Selecting previously unselected package libjs-modernizr. 331s Preparing to unpack .../240-libjs-modernizr_3.13.0-0.1_all.deb ... 331s Unpacking libjs-modernizr (3.13.0-0.1) ... 331s Selecting previously unselected package r-cran-later. 331s Preparing to unpack .../241-r-cran-later_1.4.1+dfsg-1_amd64.deb ... 331s Unpacking r-cran-later (1.4.1+dfsg-1) ... 331s Selecting previously unselected package r-cran-magrittr. 331s Preparing to unpack .../242-r-cran-magrittr_2.0.3-1_amd64.deb ... 331s Unpacking r-cran-magrittr (2.0.3-1) ... 331s Selecting previously unselected package r-cran-promises. 331s Preparing to unpack .../243-r-cran-promises_1.3.2+dfsg-1_amd64.deb ... 331s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 331s Selecting previously unselected package r-cran-httpuv. 331s Preparing to unpack .../244-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 331s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 331s Selecting previously unselected package r-cran-xtable. 331s Preparing to unpack .../245-r-cran-xtable_1%3a1.8-4-2_all.deb ... 331s Unpacking r-cran-xtable (1:1.8-4-2) ... 331s Selecting previously unselected package r-cran-sourcetools. 331s Preparing to unpack .../246-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 331s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 331s Selecting previously unselected package r-cran-withr. 331s Preparing to unpack .../247-r-cran-withr_3.0.2+dfsg-1_all.deb ... 331s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 331s Selecting previously unselected package r-cran-commonmark. 331s Preparing to unpack .../248-r-cran-commonmark_1.9.2-2_amd64.deb ... 331s Unpacking r-cran-commonmark (1.9.2-2) ... 331s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 331s Preparing to unpack .../249-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 331s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 331s Selecting previously unselected package r-cran-shiny. 331s Preparing to unpack .../250-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 331s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 332s Selecting previously unselected package r-cran-rmarkdown. 332s Preparing to unpack .../251-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 332s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 332s Selecting previously unselected package r-cran-bookdown. 332s Preparing to unpack .../252-r-cran-bookdown_0.42+dfsg-1_all.deb ... 332s Unpacking r-cran-bookdown (0.42+dfsg-1) ... 332s Selecting previously unselected package r-cran-biocmanager. 332s Preparing to unpack .../253-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 332s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 332s Selecting previously unselected package tex-common. 332s Preparing to unpack .../254-tex-common_6.19_all.deb ... 332s Unpacking tex-common (6.19) ... 332s Selecting previously unselected package t1utils. 332s Preparing to unpack .../255-t1utils_1.41-4build3_amd64.deb ... 332s Unpacking t1utils (1.41-4build3) ... 332s Selecting previously unselected package texlive-binaries. 332s Preparing to unpack .../256-texlive-binaries_2024.20240313.70630+ds-5build2_amd64.deb ... 332s Unpacking texlive-binaries (2024.20240313.70630+ds-5build2) ... 332s Selecting previously unselected package texlive-base. 332s Preparing to unpack .../257-texlive-base_2024.20250114-1_all.deb ... 332s Unpacking texlive-base (2024.20250114-1) ... 333s Selecting previously unselected package texlive-latex-base. 333s Preparing to unpack .../258-texlive-latex-base_2024.20250114-1_all.deb ... 333s Unpacking texlive-latex-base (2024.20250114-1) ... 333s Selecting previously unselected package texlive-bibtex-extra. 333s Preparing to unpack .../259-texlive-bibtex-extra_2024.20250114-1_all.deb ... 333s Unpacking texlive-bibtex-extra (2024.20250114-1) ... 335s Selecting previously unselected package r-bioc-biocversion. 335s Preparing to unpack .../260-r-bioc-biocversion_3.20.0-2_all.deb ... 335s Unpacking r-bioc-biocversion (3.20.0-2) ... 335s Selecting previously unselected package r-bioc-biocstyle. 335s Preparing to unpack .../261-r-bioc-biocstyle_2.34.0+dfsg-1_all.deb ... 335s Unpacking r-bioc-biocstyle (2.34.0+dfsg-1) ... 335s Selecting previously unselected package r-cran-curl. 335s Preparing to unpack .../262-r-cran-curl_6.2.1+dfsg-1ubuntu1_amd64.deb ... 335s Unpacking r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 335s Selecting previously unselected package r-cran-sys. 335s Preparing to unpack .../263-r-cran-sys_3.4.3-1_amd64.deb ... 335s Unpacking r-cran-sys (3.4.3-1) ... 335s Selecting previously unselected package r-cran-askpass. 335s Preparing to unpack .../264-r-cran-askpass_1.2.1-1_amd64.deb ... 335s Unpacking r-cran-askpass (1.2.1-1) ... 335s Selecting previously unselected package r-cran-openssl. 335s Preparing to unpack .../265-r-cran-openssl_2.3.2+dfsg-1_amd64.deb ... 335s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 335s Selecting previously unselected package r-cran-httr. 335s Preparing to unpack .../266-r-cran-httr_1.4.7+dfsg-1_all.deb ... 335s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 335s Selecting previously unselected package r-bioc-ucsc.utils. 335s Preparing to unpack .../267-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 335s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 335s Selecting previously unselected package r-bioc-genomeinfodbdata. 335s Preparing to unpack .../268-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 335s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 336s Selecting previously unselected package r-bioc-genomeinfodb. 336s Preparing to unpack .../269-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 336s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 336s Selecting previously unselected package r-bioc-biostrings. 336s Preparing to unpack .../270-r-bioc-biostrings_2.74.1+dfsg-2_amd64.deb ... 336s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 336s Selecting previously unselected package r-bioc-genomicranges. 336s Preparing to unpack .../271-r-bioc-genomicranges_1.58.0+dfsg-2_amd64.deb ... 336s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 336s Selecting previously unselected package r-cran-xml. 336s Preparing to unpack .../272-r-cran-xml_3.99-0.18-1_amd64.deb ... 336s Unpacking r-cran-xml (3.99-0.18-1) ... 336s Selecting previously unselected package r-cran-bitops. 336s Preparing to unpack .../273-r-cran-bitops_1.0-9-1_amd64.deb ... 336s Unpacking r-cran-bitops (1.0-9-1) ... 336s Selecting previously unselected package r-bioc-rhtslib. 336s Preparing to unpack .../274-r-bioc-rhtslib_3.2.0+dfsg-2_amd64.deb ... 336s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 336s Selecting previously unselected package r-bioc-rsamtools. 336s Preparing to unpack .../275-r-bioc-rsamtools_2.22.0+dfsg-2_amd64.deb ... 336s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 336s Selecting previously unselected package r-bioc-summarizedexperiment. 336s Preparing to unpack .../276-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 336s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 336s Selecting previously unselected package r-bioc-genomicalignments. 336s Preparing to unpack .../277-r-bioc-genomicalignments_1.42.0-2_amd64.deb ... 336s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 336s Selecting previously unselected package r-cran-rcurl. 336s Preparing to unpack .../278-r-cran-rcurl_1.98-1.16+dfsg-1_amd64.deb ... 336s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 336s Selecting previously unselected package r-cran-rjson. 336s Preparing to unpack .../279-r-cran-rjson_0.2.23-1_amd64.deb ... 336s Unpacking r-cran-rjson (0.2.23-1) ... 336s Selecting previously unselected package r-cran-restfulr. 336s Preparing to unpack .../280-r-cran-restfulr_0.0.15-1_amd64.deb ... 336s Unpacking r-cran-restfulr (0.0.15-1) ... 336s Selecting previously unselected package r-bioc-rtracklayer. 336s Preparing to unpack .../281-r-bioc-rtracklayer_1.66.0-2_amd64.deb ... 336s Unpacking r-bioc-rtracklayer (1.66.0-2) ... 336s Selecting previously unselected package r-bioc-bsgenome. 336s Preparing to unpack .../282-r-bioc-bsgenome_1.74.0-2_all.deb ... 336s Unpacking r-bioc-bsgenome (1.74.0-2) ... 336s Selecting previously unselected package r-cran-farver. 336s Preparing to unpack .../283-r-cran-farver_2.1.2-1_amd64.deb ... 336s Unpacking r-cran-farver (2.1.2-1) ... 336s Selecting previously unselected package r-cran-labeling. 336s Preparing to unpack .../284-r-cran-labeling_0.4.3-1_all.deb ... 336s Unpacking r-cran-labeling (0.4.3-1) ... 337s Selecting previously unselected package r-cran-colorspace. 337s Preparing to unpack .../285-r-cran-colorspace_2.1-1+dfsg-1_amd64.deb ... 337s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 337s Selecting previously unselected package r-cran-munsell. 337s Preparing to unpack .../286-r-cran-munsell_0.5.1-1_all.deb ... 337s Unpacking r-cran-munsell (0.5.1-1) ... 337s Selecting previously unselected package r-cran-rcolorbrewer. 337s Preparing to unpack .../287-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 337s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 337s Selecting previously unselected package r-cran-viridislite. 337s Preparing to unpack .../288-r-cran-viridislite_0.4.2-2_all.deb ... 337s Unpacking r-cran-viridislite (0.4.2-2) ... 337s Selecting previously unselected package r-cran-scales. 337s Preparing to unpack .../289-r-cran-scales_1.3.0-1_all.deb ... 337s Unpacking r-cran-scales (1.3.0-1) ... 337s Selecting previously unselected package r-cran-locfit. 337s Preparing to unpack .../290-r-cran-locfit_1.5-9.12-1_amd64.deb ... 337s Unpacking r-cran-locfit (1.5-9.12-1) ... 337s Selecting previously unselected package r-cran-gtools. 337s Preparing to unpack .../291-r-cran-gtools_3.9.5-1_amd64.deb ... 337s Unpacking r-cran-gtools (3.9.5-1) ... 337s Selecting previously unselected package r-cran-data.table. 337s Preparing to unpack .../292-r-cran-data.table_1.17.0+dfsg-1_amd64.deb ... 337s Unpacking r-cran-data.table (1.17.0+dfsg-1) ... 337s Selecting previously unselected package r-cran-r.methodss3. 337s Preparing to unpack .../293-r-cran-r.methodss3_1.8.2-1_all.deb ... 337s Unpacking r-cran-r.methodss3 (1.8.2-1) ... 337s Selecting previously unselected package r-cran-r.oo. 337s Preparing to unpack .../294-r-cran-r.oo_1.27.0-1_all.deb ... 337s Unpacking r-cran-r.oo (1.27.0-1) ... 337s Selecting previously unselected package r-cran-r.utils. 337s Preparing to unpack .../295-r-cran-r.utils_2.13.0-1_all.deb ... 337s Unpacking r-cran-r.utils (2.13.0-1) ... 337s Selecting previously unselected package r-bioc-sparsematrixstats. 337s Preparing to unpack .../296-r-bioc-sparsematrixstats_1.18.0+dfsg-2_amd64.deb ... 337s Unpacking r-bioc-sparsematrixstats (1.18.0+dfsg-2) ... 337s Selecting previously unselected package r-bioc-delayedmatrixstats. 337s Preparing to unpack .../297-r-bioc-delayedmatrixstats_1.28.1+ds-1_all.deb ... 337s Unpacking r-bioc-delayedmatrixstats (1.28.1+ds-1) ... 337s Selecting previously unselected package r-cran-permute. 337s Preparing to unpack .../298-r-cran-permute_0.9-7-1_all.deb ... 337s Unpacking r-cran-permute (0.9-7-1) ... 337s Selecting previously unselected package r-cran-statmod. 337s Preparing to unpack .../299-r-cran-statmod_1.5.0-1_amd64.deb ... 337s Unpacking r-cran-statmod (1.5.0-1) ... 337s Selecting previously unselected package r-bioc-limma. 337s Preparing to unpack .../300-r-bioc-limma_3.62.2+dfsg-1_amd64.deb ... 337s Unpacking r-bioc-limma (3.62.2+dfsg-1) ... 337s Selecting previously unselected package r-bioc-rhdf5lib. 337s Preparing to unpack .../301-r-bioc-rhdf5lib_1.28.0+dfsg-2build1_amd64.deb ... 337s Unpacking r-bioc-rhdf5lib (1.28.0+dfsg-2build1) ... 337s Selecting previously unselected package r-bioc-rhdf5filters. 337s Preparing to unpack .../302-r-bioc-rhdf5filters_1.18.0+dfsg-2_amd64.deb ... 337s Unpacking r-bioc-rhdf5filters (1.18.0+dfsg-2) ... 337s Selecting previously unselected package r-bioc-rhdf5. 337s Preparing to unpack .../303-r-bioc-rhdf5_2.50.2+dfsg-1build1_amd64.deb ... 337s Unpacking r-bioc-rhdf5 (2.50.2+dfsg-1build1) ... 337s Selecting previously unselected package r-bioc-hdf5array. 337s Preparing to unpack .../304-r-bioc-hdf5array_1.34.0-2build1_amd64.deb ... 337s Unpacking r-bioc-hdf5array (1.34.0-2build1) ... 337s Selecting previously unselected package r-bioc-bsseq. 337s Preparing to unpack .../305-r-bioc-bsseq_1.42.0+dfsg-2_amd64.deb ... 337s Unpacking r-bioc-bsseq (1.42.0+dfsg-2) ... 338s Selecting previously unselected package r-cran-backports. 338s Preparing to unpack .../306-r-cran-backports_1.5.0-2_amd64.deb ... 338s Unpacking r-cran-backports (1.5.0-2) ... 338s Selecting previously unselected package r-cran-base64url. 338s Preparing to unpack .../307-r-cran-base64url_1.4-2build1_amd64.deb ... 338s Unpacking r-cran-base64url (1.4-2build1) ... 338s Selecting previously unselected package r-cran-brew. 338s Preparing to unpack .../308-r-cran-brew_1.0-10-1_all.deb ... 338s Unpacking r-cran-brew (1.0-10-1) ... 338s Selecting previously unselected package r-cran-checkmate. 338s Preparing to unpack .../309-r-cran-checkmate_2.3.2-1_amd64.deb ... 338s Unpacking r-cran-checkmate (2.3.2-1) ... 338s Selecting previously unselected package r-cran-pkgconfig. 338s Preparing to unpack .../310-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 338s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 338s Selecting previously unselected package r-cran-vctrs. 338s Preparing to unpack .../311-r-cran-vctrs_0.6.5-1_amd64.deb ... 338s Unpacking r-cran-vctrs (0.6.5-1) ... 338s Selecting previously unselected package r-cran-hms. 338s Preparing to unpack .../312-r-cran-hms_1.1.3-1_all.deb ... 338s Unpacking r-cran-hms (1.1.3-1) ... 338s Selecting previously unselected package r-cran-prettyunits. 338s Preparing to unpack .../313-r-cran-prettyunits_1.2.0-1_all.deb ... 338s Unpacking r-cran-prettyunits (1.2.0-1) ... 338s Selecting previously unselected package r-cran-progress. 338s Preparing to unpack .../314-r-cran-progress_1.2.3-1_all.deb ... 338s Unpacking r-cran-progress (1.2.3-1) ... 338s Selecting previously unselected package r-cran-stringi. 338s Preparing to unpack .../315-r-cran-stringi_1.8.4-1build1_amd64.deb ... 338s Unpacking r-cran-stringi (1.8.4-1build1) ... 338s Selecting previously unselected package r-cran-batchtools. 338s Preparing to unpack .../316-r-cran-batchtools_0.9.17+dfsg-1_amd64.deb ... 338s Unpacking r-cran-batchtools (0.9.17+dfsg-1) ... 338s Selecting previously unselected package r-cran-brio. 338s Preparing to unpack .../317-r-cran-brio_1.1.5-1_amd64.deb ... 338s Unpacking r-cran-brio (1.1.5-1) ... 338s Selecting previously unselected package r-cran-ps. 338s Preparing to unpack .../318-r-cran-ps_1.9.0-1_amd64.deb ... 338s Unpacking r-cran-ps (1.9.0-1) ... 338s Selecting previously unselected package r-cran-processx. 338s Preparing to unpack .../319-r-cran-processx_3.8.6-1_amd64.deb ... 338s Unpacking r-cran-processx (3.8.6-1) ... 338s Selecting previously unselected package r-cran-callr. 338s Preparing to unpack .../320-r-cran-callr_3.7.6-1_all.deb ... 338s Unpacking r-cran-callr (3.7.6-1) ... 338s Selecting previously unselected package r-cran-desc. 338s Preparing to unpack .../321-r-cran-desc_1.4.3-1_all.deb ... 338s Unpacking r-cran-desc (1.4.3-1) ... 338s Selecting previously unselected package r-cran-diffobj. 338s Preparing to unpack .../322-r-cran-diffobj_0.3.5-1_amd64.deb ... 338s Unpacking r-cran-diffobj (0.3.5-1) ... 338s Selecting previously unselected package r-cran-iterators. 338s Preparing to unpack .../323-r-cran-iterators_1.0.14-1_all.deb ... 338s Unpacking r-cran-iterators (1.0.14-1) ... 338s Selecting previously unselected package r-cran-foreach. 338s Preparing to unpack .../324-r-cran-foreach_1.5.2-1_all.deb ... 338s Unpacking r-cran-foreach (1.5.2-1) ... 338s Selecting previously unselected package r-cran-doparallel. 338s Preparing to unpack .../325-r-cran-doparallel_1.0.17-1_all.deb ... 338s Unpacking r-cran-doparallel (1.0.17-1) ... 338s Selecting previously unselected package r-cran-pkgbuild. 338s Preparing to unpack .../326-r-cran-pkgbuild_1.4.6-1_all.deb ... 338s Unpacking r-cran-pkgbuild (1.4.6-1) ... 338s Selecting previously unselected package r-cran-rprojroot. 338s Preparing to unpack .../327-r-cran-rprojroot_2.0.4-2_all.deb ... 338s Unpacking r-cran-rprojroot (2.0.4-2) ... 338s Selecting previously unselected package r-cran-pkgload. 338s Preparing to unpack .../328-r-cran-pkgload_1.4.0-1_all.deb ... 338s Unpacking r-cran-pkgload (1.4.0-1) ... 339s Selecting previously unselected package r-cran-praise. 339s Preparing to unpack .../329-r-cran-praise_1.0.0-4build1_all.deb ... 339s Unpacking r-cran-praise (1.0.0-4build1) ... 339s Selecting previously unselected package r-cran-waldo. 339s Preparing to unpack .../330-r-cran-waldo_0.6.1-2_all.deb ... 339s Unpacking r-cran-waldo (0.6.1-2) ... 339s Selecting previously unselected package r-cran-testthat. 339s Preparing to unpack .../331-r-cran-testthat_3.2.3-1_amd64.deb ... 339s Unpacking r-cran-testthat (3.2.3-1) ... 339s Setting up libjs-json (0~20221030+~1.0.8-1) ... 339s Setting up javascript-common (12) ... 339s Setting up libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 339s Setting up libgnutls-openssl27t64:amd64 (3.8.9-2ubuntu2) ... 339s Setting up libpixman-1-0:amd64 (0.44.0-3) ... 339s Setting up libsharpyuv0:amd64 (1.5.0-0.1) ... 339s Setting up libncurses-dev:amd64 (6.5+20250216-2) ... 339s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 339s Setting up libzstd-dev:amd64 (1.5.6+dfsg-2) ... 339s Setting up liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 339s Setting up libxpm4:amd64 (1:3.5.17-1build2) ... 339s Setting up hdf5-helpers (1.14.5+repack-3) ... 339s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 339s Setting up libxi6:amd64 (2:1.8.2-1) ... 339s Setting up libxrender1:amd64 (1:0.9.10-1.1build1) ... 339s Setting up libdatrie1:amd64 (0.2.13-3build1) ... 339s Setting up libjs-popper.js (1.16.1+ds-6) ... 339s Setting up libxcb-render0:amd64 (1.17.0-2) ... 339s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 339s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 339s Setting up libjs-lunr (2.3.9~dfsg-2) ... 339s Setting up unzip (6.0-28ubuntu6) ... 339s Setting up liblatex-tounicode-perl (0.55-1) ... 339s Setting up x11-common (1:7.7+23ubuntu3) ... 339s Setting up node-html5shiv (3.7.3+dfsg-5) ... 339s Setting up libdeflate0:amd64 (1.23-1) ... 339s Setting up libevent-2.1-7t64:amd64 (2.1.12-stable-10) ... 339s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 339s Setting up libxcb-shm0:amd64 (1.17.0-2) ... 339s Setting up libreadline-dev:amd64 (8.2-6) ... 339s Setting up libgomp1:amd64 (15-20250222-0ubuntu1) ... 339s Setting up libjs-modernizr (3.13.0-0.1) ... 339s Setting up libjbig0:amd64 (2.1-6.1ubuntu2) ... 339s Setting up libpcre2-16-0:amd64 (10.45-1) ... 339s Setting up libaec0:amd64 (1.1.3-1) ... 339s Setting up libpsl-dev:amd64 (0.21.2-1.1build1) ... 339s Setting up libsnappy1v5:amd64 (1.2.1-1) ... 339s Setting up libjs-es5-shim (4.6.7-2) ... 339s Setting up tex-common (6.19) ... 339s update-language: texlive-base not installed and configured, doing nothing! 339s Setting up libio-string-perl (1.08-4) ... 339s Setting up zip (3.0-14ubuntu2) ... 339s Setting up libpcre2-32-0:amd64 (10.45-1) ... 339s Setting up libblas3:amd64 (3.12.1-2) ... 339s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 339s Setting up libunbound8:amd64 (1.22.0-1ubuntu1) ... 339s Setting up libtirpc-dev:amd64 (1.3.4+ds-1.3) ... 339s Setting up libpkgconf3:amd64 (1.8.1-4) ... 339s Setting up libgmpxx4ldbl:amd64 (2:6.3.0+dfsg-3ubuntu1) ... 339s Setting up libzzip-0-13t64:amd64 (0.13.78+dfsg.1-0.1) ... 339s Setting up libgnutls-dane0t64:amd64 (3.8.9-2ubuntu2) ... 339s Setting up libteckit0:amd64 (2.5.12+ds1-1) ... 339s Setting up libgssrpc4t64:amd64 (1.21.3-4ubuntu2) ... 339s Setting up libldap-dev:amd64 (2.6.9+dfsg-1~exp2ubuntu1) ... 339s Setting up t1utils (1.41-4build3) ... 339s Setting up libquadmath0:amd64 (15-20250222-0ubuntu1) ... 339s Setting up libtexlua53-5:amd64 (2024.20240313.70630+ds-5build2) ... 339s Setting up comerr-dev:amd64 (2.1-1.47.2-1ubuntu1) ... 339s Setting up libjs-d3 (3.5.17-4) ... 339s Setting up fonts-dejavu-mono (2.37-8) ... 339s Setting up libssl-dev:amd64 (3.4.1-1ubuntu1) ... 339s Setting up libmpc3:amd64 (1.3.1-1build2) ... 339s Setting up libtcl8.6:amd64 (8.6.16+dfsg-1) ... 339s Setting up libmpfi0:amd64 (1.5.4+ds-4) ... 339s Setting up icu-devtools (76.1-1ubuntu2) ... 339s Setting up fonts-dejavu-core (2.37-8) ... 339s Setting up pkgconf-bin (1.8.1-4) ... 339s Setting up libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 339s Setting up libidn2-dev:amd64 (2.3.7-2build2) ... 339s Setting up libkpathsea6:amd64 (2024.20240313.70630+ds-5build2) ... 339s Setting up libgfortran5:amd64 (15-20250222-0ubuntu1) ... 339s Setting up libwebp7:amd64 (1.5.0-0.1) ... 339s Setting up liblzma-dev:amd64 (5.6.4-1) ... 339s Setting up libubsan1:amd64 (15-20250222-0ubuntu1) ... 339s Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 339s Setting up libpcre2-posix3:amd64 (10.45-1) ... 339s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... 339s Setting up libhwasan0:amd64 (15-20250222-0ubuntu1) ... 339s Setting up libasan8:amd64 (15-20250222-0ubuntu1) ... 339s Setting up libblosc1:amd64 (1.21.5+ds-1build1) ... 339s Setting up fonts-lmodern (2.005-1) ... 339s Setting up liblua5.4-0:amd64 (5.4.7-1) ... 339s Setting up libharfbuzz0b:amd64 (10.2.0-1) ... 339s Setting up libthai-data (0.1.29-2build1) ... 339s Setting up node-bootstrap-sass (3.4.3-2) ... 339s Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... 339s Setting up libxss1:amd64 (1:1.2.3-1build3) ... 339s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... 339s Setting up libpaper2:amd64 (2.2.5-0.3) ... 339s Setting up pandoc-data (3.1.11.1-3build1) ... 339s Setting up libtsan2:amd64 (15-20250222-0ubuntu1) ... 339s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 340s Setting up libisl23:amd64 (0.27-1) ... 340s Setting up libtasn1-6-dev:amd64 (4.20.0-2) ... 340s Setting up libdeflate-dev:amd64 (1.23-1) ... 340s Setting up node-normalize.css (8.0.1-5) ... 340s Setting up libhnswlib-dev (0.8.0-1build3) ... 340s Setting up libicu-dev:amd64 (76.1-1ubuntu2) ... 340s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 340s Setting up xdg-utils (1.2.1-2ubuntu1) ... 340s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 340s Setting up libcc1-0:amd64 (15-20250222-0ubuntu1) ... 340s Setting up libbrotli-dev:amd64 (1.1.0-2build4) ... 340s Setting up liblsan0:amd64 (15-20250222-0ubuntu1) ... 340s Setting up libp11-kit-dev:amd64 (0.25.5-2ubuntu3) ... 340s Setting up libblas-dev:amd64 (3.12.1-2) ... 340s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode 340s Setting up libsz2:amd64 (1.1.3-1) ... 340s Setting up dctrl-tools (2.24-3build3) ... 340s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 340s Setting up libitm1:amd64 (15-20250222-0ubuntu1) ... 340s Setting up libsynctex2:amd64 (2024.20240313.70630+ds-5build2) ... 340s Setting up libkadm5clnt-mit12:amd64 (1.21.3-4ubuntu2) ... 340s Setting up libbz2-dev:amd64 (1.0.8-6) ... 340s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 340s Setting up libpotrace0:amd64 (1.16-2build1) ... 340s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 340s Setting up libice6:amd64 (2:1.1.1-1) ... 340s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-3ubuntu2) ... 340s Setting up liblapack3:amd64 (3.12.1-2) ... 340s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 340s Setting up libgmp-dev:amd64 (2:6.3.0+dfsg-3ubuntu1) ... 340s Setting up libpcre2-dev:amd64 (10.45-1) ... 340s Setting up nettle-dev:amd64 (3.10.1-1) ... 340s Setting up libkdb5-10t64:amd64 (1.21.3-4ubuntu2) ... 340s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 340s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 340s Setting up libpng-dev:amd64 (1.6.47-1) ... 340s Setting up libaec-dev:amd64 (1.1.3-1) ... 340s Setting up libpaper-utils (2.2.5-0.3) ... 340s Setting up libbibtex-parser-perl (1.05+dfsg-1) ... 340s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 340s Setting up pkgconf:amd64 (1.8.1-4) ... 340s Setting up libthai0:amd64 (0.1.29-2build1) ... 340s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 340s Setting up libptexenc1:amd64 (2024.20240313.70630+ds-5build2) ... 340s Setting up pandoc (3.1.11.1+ds-2) ... 340s Setting up liblapack-dev:amd64 (3.12.1-2) ... 340s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode 340s Setting up cpp-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 340s Setting up libssh2-1-dev:amd64 (1.11.1-1) ... 340s Setting up cpp-14 (14.2.0-17ubuntu3) ... 340s Setting up libhdf5-310:amd64 (1.14.5+repack-3) ... 340s Setting up libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 340s Setting up libkadm5srv-mit12:amd64 (1.21.3-4ubuntu2) ... 340s Setting up libfontconfig1:amd64 (2.15.0-2ubuntu1) ... 340s Setting up libgcc-14-dev:amd64 (14.2.0-17ubuntu3) ... 340s Setting up libjpeg8-dev:amd64 (8c-2ubuntu11) ... 340s Setting up libhdf5-fortran-310:amd64 (1.14.5+repack-3) ... 340s Setting up libstdc++-14-dev:amd64 (14.2.0-17ubuntu3) ... 340s Setting up libsm6:amd64 (2:1.2.4-1) ... 340s Setting up krb5-multidev:amd64 (1.21.3-4ubuntu2) ... 340s Setting up libhdf5-cpp-310:amd64 (1.14.5+repack-3) ... 340s Setting up cpp-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 340s Setting up libgfortran-14-dev:amd64 (14.2.0-17ubuntu3) ... 340s Setting up libgnutls28-dev:amd64 (3.8.9-2ubuntu2) ... 340s Setting up libnghttp2-dev:amd64 (1.64.0-1) ... 340s Setting up libhdf5-hl-310:amd64 (1.14.5+repack-3) ... 340s Setting up fontconfig (2.15.0-2ubuntu1) ... 342s Regenerating fonts cache... done. 342s Setting up libxft2:amd64 (2.3.6-1build1) ... 342s Setting up libboost1.83-dev:amd64 (1.83.0-4.1ubuntu2) ... 342s Setting up libtk8.6:amd64 (8.6.16-1) ... 342s Setting up libpango-1.0-0:amd64 (1.56.2-1) ... 342s Setting up libjpeg-dev:amd64 (8c-2ubuntu11) ... 342s Setting up libcairo2:amd64 (1.18.2-2) ... 342s Setting up libkrb5-dev:amd64 (1.21.3-4ubuntu2) ... 342s Setting up libxt6t64:amd64 (1:1.2.1-1.2build1) ... 342s Setting up librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-2build7) ... 342s Setting up cpp (4:14.2.0-1ubuntu1) ... 342s Setting up libboost-dev:amd64 (1.83.0.2ubuntu1) ... 342s Setting up gcc-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 342s Setting up libpangoft2-1.0-0:amd64 (1.56.2-1) ... 342s Setting up libpangocairo-1.0-0:amd64 (1.56.2-1) ... 342s Setting up libhdf5-hl-cpp-310:amd64 (1.14.5+repack-3) ... 342s Setting up libhdf5-hl-fortran-310:amd64 (1.14.5+repack-3) ... 342s Setting up libxmu6:amd64 (2:1.1.3-3build2) ... 342s Setting up gcc-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 342s Setting up libxaw7:amd64 (2:1.0.16-1) ... 342s Setting up gcc-14 (14.2.0-17ubuntu3) ... 342s Setting up gfortran-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 342s Setting up libcurl4-openssl-dev:amd64 (8.12.1-3ubuntu1) ... 342s Setting up r-base-core (4.4.3-1) ... 342s Creating config file /etc/R/Renviron with new version 342s Setting up r-cran-crayon (1.5.3-1) ... 342s Setting up libhdf5-dev (1.14.5+repack-3) ... 342s update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 342s Setting up r-cran-labeling (0.4.3-1) ... 342s Setting up r-cran-sourcetools (0.1.7-1-1) ... 342s Setting up r-cran-futile.options (1.0.1-3build1) ... 342s Setting up r-cran-lattice (0.22-6-1) ... 342s Setting up r-cran-ps (1.9.0-1) ... 342s Setting up r-cran-farver (2.1.2-1) ... 342s Setting up g++-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 342s Setting up r-cran-formatr (1.14-2) ... 342s Setting up r-cran-xml (3.99-0.18-1) ... 342s Setting up r-cran-viridislite (0.4.2-2) ... 342s Setting up r-cran-locfit (1.5-9.12-1) ... 342s Setting up texlive-binaries (2024.20240313.70630+ds-5build2) ... 342s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode 342s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode 342s Setting up r-cran-statmod (1.5.0-1) ... 342s Setting up g++-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 342s Setting up r-cran-commonmark (1.9.2-2) ... 342s Setting up g++-14 (14.2.0-17ubuntu3) ... 342s Setting up r-cran-rjson (0.2.23-1) ... 342s Setting up r-cran-r6 (2.6.1-1) ... 342s Setting up r-cran-pkgkitten (0.2.4-1) ... 342s Setting up gfortran-14 (14.2.0-17ubuntu3) ... 342s Setting up texlive-base (2024.20250114-1) ... 343s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 343s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 343s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 343s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 344s Setting up r-cran-magrittr (2.0.3-1) ... 344s Setting up r-cran-rappdirs (0.3.3-1) ... 344s Setting up r-bioc-genomeinfodbdata (1.2.13-2) ... 344s Setting up r-cran-littler (0.3.20-2) ... 344s Setting up r-cran-permute (0.9-7-1) ... 344s Setting up r-cran-bh (1.84.0-1) ... 344s Setting up r-cran-fs (1.6.5+dfsg-1) ... 344s Setting up r-cran-rcpp (1.0.14-1) ... 344s Setting up r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 344s Setting up r-cran-codetools (0.2-20-1) ... 344s Setting up r-cran-brio (1.1.5-1) ... 344s Setting up r-cran-diffobj (0.3.5-1) ... 344s Setting up r-bioc-biocgenerics (0.52.0-2) ... 344s Setting up r-cran-rlang (1.1.5-1) ... 344s Setting up r-cran-matrixstats (1.5.0-1) ... 344s Setting up littler (0.3.20-2) ... 344s Setting up r-bioc-matrixgenerics (1.18.1-1) ... 344s Setting up r-cran-xfun (0.51+dfsg-1) ... 344s Setting up r-cran-sys (3.4.3-1) ... 344s Setting up r-cran-withr (3.0.2+dfsg-1) ... 344s Setting up r-cran-backports (1.5.0-2) ... 344s Setting up r-cran-processx (3.8.6-1) ... 344s Setting up r-cran-mime (0.12-2) ... 344s Setting up r-cran-praise (1.0.0-4build1) ... 344s Setting up r-cran-base64enc (0.1-3-3) ... 344s Setting up r-cran-iterators (1.0.14-1) ... 344s Setting up r-cran-abind (1.4-8-1) ... 344s Setting up r-cran-digest (0.6.37-1) ... 344s Setting up r-cran-yaml (2.3.10-1) ... 344s Setting up r-cran-lambda.r (1.2.4-2build1) ... 344s Setting up r-cran-evaluate (1.0.3-1) ... 344s Setting up r-cran-highr (0.11+dfsg-1) ... 344s Setting up r-cran-foreach (1.5.2-1) ... 344s Setting up r-cran-prettyunits (1.2.0-1) ... 344s Setting up r-bioc-rhdf5lib (1.28.0+dfsg-2build1) ... 344s Setting up r-cran-checkmate (2.3.2-1) ... 344s Setting up r-cran-snow (1:0.4.4-2) ... 344s Setting up r-cran-gtools (3.9.5-1) ... 344s Setting up r-cran-data.table (1.17.0+dfsg-1) ... 344s Setting up r-cran-glue (1.8.0-1) ... 344s Setting up r-bioc-rhdf5filters (1.18.0+dfsg-2) ... 344s Setting up gfortran-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 344s Setting up r-cran-xtable (1:1.8-4-2) ... 344s Setting up r-cran-cli (3.6.4-1) ... 344s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 344s Setting up r-cran-bitops (1.0-9-1) ... 344s Setting up r-bioc-biocversion (3.20.0-2) ... 344s Setting up r-cran-rprojroot (2.0.4-2) ... 344s Setting up r-cran-biocmanager (1.30.25+dfsg-1) ... 344s Setting up gcc (4:14.2.0-1ubuntu1) ... 344s Setting up r-bioc-zlibbioc (1.52.0+dfsg-2) ... 344s Setting up r-cran-askpass (1.2.1-1) ... 344s Setting up r-cran-fastmap (1.2.0-1) ... 344s Setting up r-cran-r.methodss3 (1.8.2-1) ... 344s Setting up r-bioc-biobase (2.66.0-2) ... 344s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ... 344s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 344s Setting up r-cran-brew (1.0-10-1) ... 344s Setting up r-cran-colorspace (2.1-1+dfsg-1) ... 344s Setting up r-cran-stringi (1.8.4-1build1) ... 344s Setting up texlive-latex-base (2024.20250114-1) ... 344s Setting up r-cran-cpp11 (0.5.2-1) ... 344s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 344s Setting up r-bioc-s4vectors (0.44.0+dfsg-2) ... 344s Setting up r-cran-futile.logger (1.4.3-4build1) ... 344s Setting up r-cran-waldo (0.6.1-2) ... 344s Setting up r-bioc-limma (3.62.2+dfsg-1) ... 344s Setting up r-cran-later (1.4.1+dfsg-1) ... 344s Setting up r-cran-matrix (1.7-3-1) ... 344s Setting up r-cran-doparallel (1.0.17-1) ... 344s Setting up r-cran-htmltools (0.5.8.1-1) ... 344s Setting up r-cran-tinytex (0.56-1) ... 344s Setting up r-cran-knitr (1.49+dfsg-1) ... 344s Setting up g++ (4:14.2.0-1ubuntu1) ... 344s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 344s Setting up r-cran-cachem (1.1.0-1) ... 344s Setting up r-cran-sass (0.4.9+dfsg-1) ... 344s Setting up build-essential (12.10ubuntu1) ... 344s Setting up r-bioc-iranges (2.40.1-2) ... 344s Setting up r-bioc-assorthead (1.0.1+ds-2) ... 344s Setting up r-cran-rcurl (1.98-1.16+dfsg-1) ... 344s Setting up r-cran-restfulr (0.0.15-1) ... 344s Setting up r-bioc-sparsematrixstats (1.18.0+dfsg-2) ... 344s Setting up r-cran-vctrs (0.6.5-1) ... 344s Setting up r-cran-openssl (2.3.2+dfsg-1) ... 344s Setting up r-cran-base64url (1.4-2build1) ... 344s Setting up r-bioc-s4arrays (1.6.0+dfsg-2) ... 344s Setting up r-bioc-biocparallel (1.40.0-2) ... 344s Setting up r-cran-callr (3.7.6-1) ... 344s Setting up r-bioc-rhtslib (3.2.0+dfsg-2) ... 344s Setting up r-cran-desc (1.4.3-1) ... 344s Setting up r-bioc-rhdf5 (2.50.2+dfsg-1build1) ... 344s Setting up r-cran-munsell (0.5.1-1) ... 344s Setting up r-cran-fontawesome (0.5.3-1) ... 344s Setting up r-bioc-biocio (1.16.0+dfsg-2) ... 344s Setting up r-cran-r.oo (1.27.0-1) ... 344s Setting up gfortran (4:14.2.0-1ubuntu1) ... 344s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 344s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 344s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 344s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 344s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 344s Setting up texlive-bibtex-extra (2024.20250114-1) ... 344s Setting up r-cran-httr (1.4.7+dfsg-1) ... 344s Setting up r-cran-hms (1.1.3-1) ... 344s Setting up r-cran-scales (1.3.0-1) ... 344s Setting up r-cran-memoise (2.0.1-1) ... 344s Setting up r-cran-promises (1.3.2+dfsg-1) ... 344s Setting up r-bioc-xvector (0.46.0-2) ... 344s Setting up r-cran-pkgbuild (1.4.6-1) ... 344s Setting up r-cran-progress (1.2.3-1) ... 344s Setting up r-cran-pkgload (1.4.0-1) ... 344s Setting up r-cran-r.utils (2.13.0-1) ... 344s Setting up r-base-dev (4.4.3-1) ... 344s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 344s Setting up r-bioc-sparsearray (1.6.2+dfsg-1) ... 344s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 344s Setting up r-cran-testthat (3.2.3-1) ... 344s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 344s Setting up r-cran-bslib (0.8.0+dfsg-1) ... 344s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 344s Setting up r-cran-batchtools (0.9.17+dfsg-1) ... 344s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 344s Setting up r-bioc-hdf5array (1.34.0-2build1) ... 344s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 344s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 344s Setting up r-bioc-delayedmatrixstats (1.28.1+ds-1) ... 344s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 344s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 344s Setting up r-bioc-beachmat (2.22.0+ds-2) ... 344s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... 344s Setting up r-cran-bookdown (0.42+dfsg-1) ... 344s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 344s Setting up r-bioc-biocstyle (2.34.0+dfsg-1) ... 344s Setting up r-bioc-genomicalignments (1.42.0-2) ... 344s Setting up r-bioc-rtracklayer (1.66.0-2) ... 344s Setting up r-bioc-bsgenome (1.74.0-2) ... 344s Setting up r-bioc-bsseq (1.42.0+dfsg-2) ... 344s Processing triggers for libc-bin (2.41-1ubuntu2) ... 344s Processing triggers for man-db (2.13.0-1) ... 346s Processing triggers for install-info (7.1.1-1) ... 346s Processing triggers for tex-common (6.19) ... 346s Running updmap-sys. This may take some time... done. 346s Running mktexlsr /var/lib/texmf ... done. 346s Building format(s) --all. 373s This may take some time... done. 374s autopkgtest [19:10:25]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 374s autopkgtest [19:10:25]: test pkg-r-autopkgtest: [----------------------- 374s Test: Try to load the R library bsseq 374s 374s R version 4.4.3 (2025-02-28) -- "Trophy Case" 374s Copyright (C) 2025 The R Foundation for Statistical Computing 374s Platform: x86_64-pc-linux-gnu 374s 374s R is free software and comes with ABSOLUTELY NO WARRANTY. 374s You are welcome to redistribute it under certain conditions. 374s Type 'license()' or 'licence()' for distribution details. 374s 374s R is a collaborative project with many contributors. 374s Type 'contributors()' for more information and 374s 'citation()' on how to cite R or R packages in publications. 374s 374s Type 'demo()' for some demos, 'help()' for on-line help, or 374s 'help.start()' for an HTML browser interface to help. 374s Type 'q()' to quit R. 374s 374s > library('bsseq') 374s Loading required package: BiocGenerics 375s 375s Attaching package: ‘BiocGenerics’ 375s 375s The following objects are masked from ‘package:stats’: 375s 375s IQR, mad, sd, var, xtabs 375s 375s The following objects are masked from ‘package:base’: 375s 375s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 375s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 375s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 375s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 375s Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff, 375s table, tapply, union, unique, unsplit, which.max, which.min 375s 375s Loading required package: GenomicRanges 375s Loading required package: stats4 375s Loading required package: S4Vectors 375s 375s Attaching package: ‘S4Vectors’ 375s 375s The following object is masked from ‘package:utils’: 375s 375s findMatches 375s 375s The following objects are masked from ‘package:base’: 375s 375s expand.grid, I, unname 375s 375s Loading required package: IRanges 376s Loading required package: GenomeInfoDb 376s Loading required package: SummarizedExperiment 376s Loading required package: MatrixGenerics 376s Loading required package: matrixStats 376s 376s Attaching package: ‘MatrixGenerics’ 376s 376s The following objects are masked from ‘package:matrixStats’: 376s 376s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 376s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 376s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 376s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 376s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 376s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 376s colWeightedMeans, colWeightedMedians, colWeightedSds, 376s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 376s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 376s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 376s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 376s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 376s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 376s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 376s rowWeightedSds, rowWeightedVars 376s 376s Loading required package: Biobase 377s Welcome to Bioconductor 377s 377s Vignettes contain introductory material; view with 377s 'browseVignettes()'. To cite Bioconductor, see 377s 'citation("Biobase")', and for packages 'citation("pkgname")'. 377s 377s 377s Attaching package: ‘Biobase’ 377s 377s The following object is masked from ‘package:MatrixGenerics’: 377s 377s rowMedians 377s 377s The following objects are masked from ‘package:matrixStats’: 377s 377s anyMissing, rowMedians 377s 385s > 385s > 385s Other tests are currently unsupported! 385s They will be progressively added. 385s autopkgtest [19:10:36]: test pkg-r-autopkgtest: -----------------------] 385s pkg-r-autopkgtest PASS 385s autopkgtest [19:10:36]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 386s autopkgtest [19:10:37]: @@@@@@@@@@@@@@@@@@@@ summary 386s pkg-r-autopkgtest PASS 403s nova [W] Skipping flock for amd64 403s Creating nova instance adt-plucky-amd64-r-bioc-bsseq-20250315-190411-juju-7f2275-prod-proposed-migration-environment-20-a57d7d82-2be8-4926-8454-a10d95939ca7 from image adt/ubuntu-plucky-amd64-server-20250304.img (UUID 9c7d4da5-d95f-4c85-ac1f-51eb37e75c4c)... 403s nova [W] Timed out waiting for 07680e32-c08e-4854-9daa-c24b505a2a4a to get deleted.