0s autopkgtest [14:40:19]: starting date and time: 2025-03-15 14:40:19+0000 0s autopkgtest [14:40:19]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [14:40:19]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.j034aoax/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-bioc-bluster --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-6.secgroup --name adt-plucky-amd64-r-bioc-bluster-20250315-144019-juju-7f2275-prod-proposed-migration-environment-2-9cc8a9ec-dc8e-4105-9547-5c88ec0914a2 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 73s autopkgtest [14:41:32]: testbed dpkg architecture: amd64 73s autopkgtest [14:41:32]: testbed apt version: 2.9.31ubuntu1 74s autopkgtest [14:41:33]: @@@@@@@@@@@@@@@@@@@@ test bed setup 74s autopkgtest [14:41:33]: testbed release detected to be: None 75s autopkgtest [14:41:34]: updating testbed package index (apt update) 75s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 76s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 76s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 76s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 76s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 76s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [404 kB] 76s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB] 76s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [64.9 kB] 76s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [90.3 kB] 76s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 c-n-f Metadata [2004 B] 76s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 c-n-f Metadata [116 B] 76s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [179 kB] 77s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [359 kB] 77s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 c-n-f Metadata [17.1 kB] 77s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [8452 B] 77s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [17.0 kB] 77s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 c-n-f Metadata [912 B] 77s Fetched 1385 kB in 2s (680 kB/s) 78s Reading package lists... 79s Reading package lists... 79s Building dependency tree... 79s Reading state information... 79s Calculating upgrade... 79s Calculating upgrade... 79s The following package was automatically installed and is no longer required: 79s libnl-genl-3-200 79s Use 'sudo apt autoremove' to remove it. 79s The following NEW packages will be installed: 79s bpftool libdebuginfod-common libdebuginfod1t64 linux-headers-6.14.0-10 79s linux-headers-6.14.0-10-generic linux-image-6.14.0-10-generic 79s linux-modules-6.14.0-10-generic linux-modules-extra-6.14.0-10-generic 79s linux-perf linux-tools-6.14.0-10 linux-tools-6.14.0-10-generic pnp.ids 79s The following packages will be upgraded: 79s apparmor apt apt-utils binutils binutils-common binutils-x86-64-linux-gnu 79s cloud-init cloud-init-base curl dosfstools exfatprogs fwupd gcc-15-base 79s gir1.2-girepository-2.0 gir1.2-glib-2.0 htop hwdata initramfs-tools 79s initramfs-tools-bin initramfs-tools-core libapparmor1 libapt-pkg7.0 79s libassuan9 libatomic1 libaudit-common libaudit1 libbinutils libbrotli1 79s libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libctf-nobfd0 libctf0 79s libcurl3t64-gnutls libcurl4t64 libestr0 libftdi1-2 libfwupd3 libgcc-s1 79s libgirepository-1.0-1 libglib2.0-0t64 libglib2.0-data libgpgme11t64 79s libgprofng0 libjemalloc2 liblz4-1 liblzma5 libmm-glib0 libncurses6 79s libncursesw6 libnewt0.52 libnl-3-200 libnl-genl-3-200 libnl-route-3-200 79s libnss-systemd libpam-systemd libparted2t64 libpci3 libpython3-stdlib 79s libpython3.13 libpython3.13-minimal libpython3.13-stdlib libseccomp2 79s libselinux1 libsemanage-common libsemanage2 libsframe1 libsqlite3-0 79s libstdc++6 libsystemd-shared libsystemd0 libtinfo6 libudev1 libxml2 79s linux-firmware linux-generic linux-headers-generic linux-headers-virtual 79s linux-image-generic linux-image-virtual linux-libc-dev linux-tools-common 79s linux-virtual locales media-types ncurses-base ncurses-bin ncurses-term 79s parted pci.ids pciutils python-apt-common python3 python3-apt python3-bcrypt 79s python3-cffi-backend python3-dbus python3-gi python3-jinja2 python3-lazr.uri 79s python3-markupsafe python3-minimal python3-newt python3-rpds-py 79s python3-systemd python3-yaml python3.13 python3.13-gdbm python3.13-minimal 79s rsync rsyslog strace systemd systemd-cryptsetup systemd-resolved 79s systemd-sysv systemd-timesyncd ubuntu-kernel-accessories ubuntu-minimal 79s ubuntu-standard udev whiptail xz-utils 79s 125 upgraded, 12 newly installed, 0 to remove and 0 not upgraded. 79s Need to get 829 MB of archives. 79s After this operation, 325 MB of additional disk space will be used. 79s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-bin amd64 6.5+20250216-2 [194 kB] 80s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-dev-bin amd64 2.41-1ubuntu1 [24.7 kB] 80s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6-dev amd64 2.41-1ubuntu1 [2182 kB] 83s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 locales all 2.41-1ubuntu1 [4246 kB] 88s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6 amd64 2.41-1ubuntu1 [3327 kB] 92s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-bin amd64 2.41-1ubuntu1 [701 kB] 93s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-libc-dev amd64 6.14.0-10.10 [1723 kB] 96s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libatomic1 amd64 15-20250222-0ubuntu1 [10.4 kB] 96s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-15-base amd64 15-20250222-0ubuntu1 [53.4 kB] 96s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-s1 amd64 15-20250222-0ubuntu1 [77.8 kB] 96s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++6 amd64 15-20250222-0ubuntu1 [798 kB] 97s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-base all 6.5+20250216-2 [25.9 kB] 97s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-term all 6.5+20250216-2 [276 kB] 97s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 liblz4-1 amd64 1.10.0-4 [66.4 kB] 97s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma5 amd64 5.6.4-1 [157 kB] 98s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd0 amd64 257.3-1ubuntu3 [595 kB] 98s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libnss-systemd amd64 257.3-1ubuntu3 [199 kB] 99s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-sysv amd64 257.3-1ubuntu3 [11.9 kB] 99s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-resolved amd64 257.3-1ubuntu3 [345 kB] 99s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-systemd amd64 257.3-1ubuntu3 [302 kB] 100s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd-shared amd64 257.3-1ubuntu3 [2371 kB] 103s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd amd64 257.3-1ubuntu3 [3052 kB] 107s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-timesyncd amd64 257.3-1ubuntu3 [42.1 kB] 107s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-cryptsetup amd64 257.3-1ubuntu3 [124 kB] 107s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 udev amd64 257.3-1ubuntu3 [1404 kB] 109s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libudev1 amd64 257.3-1ubuntu3 [215 kB] 109s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit-common all 1:4.0.2-2ubuntu2 [6628 B] 109s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libcap-ng0 amd64 0.8.5-4build1 [15.6 kB] 109s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit1 amd64 1:4.0.2-2ubuntu2 [54.0 kB] 109s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libseccomp2 amd64 2.5.5-1ubuntu6 [53.5 kB] 110s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libselinux1 amd64 3.7-3ubuntu3 [87.3 kB] 110s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libapparmor1 amd64 4.1.0~beta5-0ubuntu8 [55.0 kB] 110s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libapt-pkg7.0 amd64 2.9.33 [1138 kB] 111s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 apt amd64 2.9.33 [1439 kB] 113s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 apt-utils amd64 2.9.33 [222 kB] 113s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-minimal amd64 3.13.2-2 [27.7 kB] 113s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 python3 amd64 3.13.2-2 [24.0 kB] 113s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13 amd64 3.13.2-2 [2341 kB] 117s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 media-types all 13.0.0 [29.9 kB] 117s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses6 amd64 6.5+20250216-2 [126 kB] 117s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libncursesw6 amd64 6.5+20250216-2 [165 kB] 117s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libtinfo6 amd64 6.5+20250216-2 [119 kB] 118s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libsqlite3-0 amd64 3.46.1-2 [715 kB] 119s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.2-2 [735 kB] 120s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.2-2 [2365 kB] 122s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.2-2 [883 kB] 124s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.2-2 [2066 kB] 126s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.4 kB] 126s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 rsync amd64 3.4.1+ds1-3 [482 kB] 127s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod-common all 0.192-4 [15.4 kB] 127s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage-common all 3.7-2.1build1 [7268 B] 127s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage2 amd64 3.7-2.1build1 [106 kB] 127s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libassuan9 amd64 3.0.2-2 [43.1 kB] 128s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-girepository-2.0 amd64 1.83.4-1 [25.3 kB] 128s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-glib-2.0 amd64 2.84.0-1 [184 kB] 128s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-0t64 amd64 2.84.0-1 [1669 kB] 130s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libgirepository-1.0-1 amd64 1.83.4-1 [89.5 kB] 130s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libestr0 amd64 0.1.11-2 [8340 B] 130s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-data all 2.84.0-1 [53.0 kB] 130s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-newt amd64 0.52.24-4ubuntu2 [21.1 kB] 131s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libnewt0.52 amd64 0.52.24-4ubuntu2 [55.7 kB] 131s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2ubuntu5 [772 kB] 132s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 python-apt-common all 2.9.9build1 [21.3 kB] 132s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-apt amd64 2.9.9build1 [172 kB] 132s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-cffi-backend amd64 1.17.1-2build2 [96.6 kB] 133s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dbus amd64 1.3.2-5build5 [102 kB] 133s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-4build1 [252 kB] 133s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-yaml amd64 6.0.2-1build2 [144 kB] 133s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 rsyslog amd64 8.2412.0-2ubuntu2 [555 kB] 134s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 whiptail amd64 0.52.24-4ubuntu2 [19.1 kB] 134s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-minimal amd64 1.549 [11.5 kB] 134s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 apparmor amd64 4.1.0~beta5-0ubuntu8 [701 kB] 135s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 dosfstools amd64 4.2-1.2 [95.0 kB] 136s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-genl-3-200 amd64 3.7.0-1 [12.2 kB] 136s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-route-3-200 amd64 3.7.0-1 [191 kB] 136s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-3-200 amd64 3.7.0-1 [64.9 kB] 136s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 parted amd64 3.6-5 [53.9 kB] 136s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libparted2t64 amd64 3.6-5 [158 kB] 137s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 pci.ids all 0.0~2025.03.09-1 [285 kB] 137s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 pciutils amd64 1:3.13.0-2 [110 kB] 137s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 libpci3 amd64 1:3.13.0-2 [39.8 kB] 137s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 strace amd64 6.13+ds-1ubuntu1 [622 kB] 138s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 xz-utils amd64 5.6.4-1 [278 kB] 138s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-standard amd64 1.549 [11.5 kB] 138s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libgprofng0 amd64 2.44-3ubuntu1 [886 kB] 140s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf0 amd64 2.44-3ubuntu1 [96.5 kB] 140s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf-nobfd0 amd64 2.44-3ubuntu1 [98.9 kB] 140s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-x86-64-linux-gnu amd64 2.44-3ubuntu1 [1108 kB] 141s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libbinutils amd64 2.44-3ubuntu1 [585 kB] 142s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils amd64 2.44-3ubuntu1 [208 kB] 142s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-common amd64 2.44-3ubuntu1 [215 kB] 143s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libsframe1 amd64 2.44-3ubuntu1 [14.8 kB] 143s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 hwdata all 0.393-3 [1562 B] 143s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 pnp.ids all 0.393-3 [29.5 kB] 143s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-common all 6.14.0-10.10 [295 kB] 144s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 bpftool amd64 7.6.0+6.14.0-10.10 [1147 kB] 145s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-markupsafe amd64 2.1.5-1build4 [13.4 kB] 145s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 145s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init-base all 25.1-0ubuntu3 [616 kB] 146s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libbrotli1 amd64 1.1.0-2build4 [365 kB] 147s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 curl amd64 8.12.1-3ubuntu1 [258 kB] 147s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4t64 amd64 8.12.1-3ubuntu1 [437 kB] 148s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 exfatprogs amd64 1.2.8-1 [76.3 kB] 148s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl3t64-gnutls amd64 8.12.1-3ubuntu1 [432 kB] 148s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 fwupd amd64 2.0.6-4 [5408 kB] 155s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libfwupd3 amd64 2.0.6-4 [136 kB] 155s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libmm-glib0 amd64 1.23.4-0ubuntu3 [251 kB] 156s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 htop amd64 3.4.0-2 [195 kB] 156s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-firmware amd64 20250310.git9e1370d3-0ubuntu1 [571 MB] 780s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools all 0.146ubuntu1 [7920 B] 780s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-core all 0.146ubuntu1 [51.9 kB] 780s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-bin amd64 0.146ubuntu1 [26.2 kB] 780s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod1t64 amd64 0.192-4 [21.0 kB] 780s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 libftdi1-2 amd64 1.5-8build1 [30.2 kB] 780s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libgpgme11t64 amd64 1.24.2-1ubuntu2 [155 kB] 781s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libjemalloc2 amd64 5.3.0-3 [277 kB] 781s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-6.14.0-10-generic amd64 6.14.0-10.10 [41.2 MB] 827s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-6.14.0-10-generic amd64 6.14.0-10.10 [15.3 MB] 844s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-extra-6.14.0-10-generic amd64 6.14.0-10.10 [120 MB] 991s Get:120 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-generic amd64 6.14.0-10.10 [1730 B] 991s Get:121 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-generic amd64 6.14.0-10.10 [11.1 kB] 991s Get:122 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-virtual amd64 6.14.0-10.10 [1722 B] 991s Get:123 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-virtual amd64 6.14.0-10.10 [11.1 kB] 991s Get:124 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-virtual amd64 6.14.0-10.10 [1642 B] 991s Get:125 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10 all 6.14.0-10.10 [14.2 MB] 1010s Get:126 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10-generic amd64 6.14.0-10.10 [3915 kB] 1016s Get:127 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-generic amd64 6.14.0-10.10 [11.0 kB] 1016s Get:128 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-perf amd64 6.14.0-10.10 [4122 kB] 1021s Get:129 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10 amd64 6.14.0-10.10 [1394 kB] 1023s Get:130 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10-generic amd64 6.14.0-10.10 [830 B] 1023s Get:131 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lazr.uri all 1.0.6-6 [13.7 kB] 1023s Get:132 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-rpds-py amd64 0.21.0-2ubuntu2 [278 kB] 1024s Get:133 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-systemd amd64 235-1build6 [43.9 kB] 1024s Get:134 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-gdbm amd64 3.13.2-2 [31.9 kB] 1024s Get:135 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-kernel-accessories amd64 1.549 [11.2 kB] 1024s Get:136 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init all 25.1-0ubuntu3 [2100 B] 1024s Get:137 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-bcrypt amd64 4.2.0-2.1build1 [221 kB] 1025s Preconfiguring packages ... 1025s Fetched 829 MB in 15min 45s (877 kB/s) 1025s (Reading database ... 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.../23-parted_3.6-5_amd64.deb ... 1034s Unpacking parted (3.6-5) over (3.6-4build1) ... 1034s Preparing to unpack .../24-libparted2t64_3.6-5_amd64.deb ... 1034s Adding 'diversion of /lib/x86_64-linux-gnu/libparted.so.2 to /lib/x86_64-linux-gnu/libparted.so.2.usr-is-merged by libparted2t64' 1034s Adding 'diversion of /lib/x86_64-linux-gnu/libparted.so.2.0.5 to /lib/x86_64-linux-gnu/libparted.so.2.0.5.usr-is-merged by libparted2t64' 1034s Unpacking libparted2t64:amd64 (3.6-5) over (3.6-4build1) ... 1034s Preparing to unpack .../25-pci.ids_0.0~2025.03.09-1_all.deb ... 1034s Unpacking pci.ids (0.0~2025.03.09-1) over (0.0~2025.02.12-1) ... 1034s Preparing to unpack .../26-pciutils_1%3a3.13.0-2_amd64.deb ... 1034s Unpacking pciutils (1:3.13.0-2) over (1:3.13.0-1) ... 1034s Preparing to unpack .../27-libpci3_1%3a3.13.0-2_amd64.deb ... 1034s Unpacking libpci3:amd64 (1:3.13.0-2) over (1:3.13.0-1) ... 1034s Preparing to unpack .../28-strace_6.13+ds-1ubuntu1_amd64.deb ... 1034s Unpacking strace 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libbinutils:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 1035s Preparing to unpack .../36-binutils_2.44-3ubuntu1_amd64.deb ... 1035s Unpacking binutils (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 1035s Preparing to unpack .../37-binutils-common_2.44-3ubuntu1_amd64.deb ... 1035s Unpacking binutils-common:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 1035s Preparing to unpack .../38-libsframe1_2.44-3ubuntu1_amd64.deb ... 1035s Unpacking libsframe1:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 1035s Preparing to unpack .../39-hwdata_0.393-3_all.deb ... 1035s Unpacking hwdata (0.393-3) over (0.392-1) ... 1035s Selecting previously unselected package pnp.ids. 1035s Preparing to unpack .../40-pnp.ids_0.393-3_all.deb ... 1035s Unpacking pnp.ids (0.393-3) ... 1035s Preparing to unpack .../41-linux-tools-common_6.14.0-10.10_all.deb ... 1035s Unpacking linux-tools-common (6.14.0-10.10) over (6.12.0-16.16) ... 1035s Selecting previously unselected package bpftool. 1035s Preparing to unpack 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unpack .../49-exfatprogs_1.2.8-1_amd64.deb ... 1036s Unpacking exfatprogs (1.2.8-1) over (1.2.7-3) ... 1036s Preparing to unpack .../50-libcurl3t64-gnutls_8.12.1-3ubuntu1_amd64.deb ... 1036s Unpacking libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) over (8.12.1-2ubuntu1) ... 1036s Preparing to unpack .../51-fwupd_2.0.6-4_amd64.deb ... 1036s Unpacking fwupd (2.0.6-4) over (2.0.6-3) ... 1036s Preparing to unpack .../52-libfwupd3_2.0.6-4_amd64.deb ... 1036s Unpacking libfwupd3:amd64 (2.0.6-4) over (2.0.6-3) ... 1036s Preparing to unpack .../53-libmm-glib0_1.23.4-0ubuntu3_amd64.deb ... 1036s Unpacking libmm-glib0:amd64 (1.23.4-0ubuntu3) over (1.23.4-0ubuntu2) ... 1036s Preparing to unpack .../54-htop_3.4.0-2_amd64.deb ... 1036s Unpacking htop (3.4.0-2) over (3.3.0-5) ... 1036s Preparing to unpack .../55-linux-firmware_20250310.git9e1370d3-0ubuntu1_amd64.deb ... 1036s Unpacking linux-firmware (20250310.git9e1370d3-0ubuntu1) over (20250204.git0fd450ee-0ubuntu1) ... 1039s Preparing to unpack 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/etc/mime.types ... 1045s Setting up linux-headers-6.14.0-10-generic (6.14.0-10.10) ... 1045s Setting up ubuntu-kernel-accessories (1.549) ... 1045s Setting up libapparmor1:amd64 (4.1.0~beta5-0ubuntu8) ... 1045s Setting up pci.ids (0.0~2025.03.09-1) ... 1045s Setting up libnewt0.52:amd64 (0.52.24-4ubuntu2) ... 1045s Setting up apt-utils (2.9.33) ... 1045s Setting up libdebuginfod-common (0.192-4) ... 1045s Setting up exfatprogs (1.2.8-1) ... 1045s Setting up linux-firmware (20250310.git9e1370d3-0ubuntu1) ... 1045s Setting up bpftool (7.6.0+6.14.0-10.10) ... 1045s Setting up libestr0:amd64 (0.1.11-2) ... 1045s Setting up libbrotli1:amd64 (1.1.0-2build4) ... 1045s Setting up libsqlite3-0:amd64 (3.46.1-2) ... 1045s Setting up dosfstools (4.2-1.2) ... 1045s Setting up rsyslog (8.2412.0-2ubuntu2) ... 1045s info: The user `syslog' is already a member of `adm'. 1046s Setting up binutils-common:amd64 (2.44-3ubuntu1) ... 1046s Setting up libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) ... 1046s 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while)... 1049s en_US.UTF-8... done 1049s Generation complete. 1049s Setting up libsframe1:amd64 (2.44-3ubuntu1) ... 1049s Setting up libpython3.13-minimal:amd64 (3.13.2-2) ... 1049s Setting up apparmor (4.1.0~beta5-0ubuntu8) ... 1049s Installing new version of config file /etc/apparmor.d/fusermount3 ... 1049s Installing new version of config file /etc/apparmor.d/lsusb ... 1049s Installing new version of config file /etc/apparmor.d/openvpn ... 1050s Reloading AppArmor profiles 1051s Setting up libftdi1-2:amd64 (1.5-8build1) ... 1051s Setting up libglib2.0-data (2.84.0-1) ... 1051s Setting up systemd-cryptsetup (257.3-1ubuntu3) ... 1051s Setting up libncurses6:amd64 (6.5+20250216-2) ... 1051s Setting up strace (6.13+ds-1ubuntu1) ... 1051s Setting up xz-utils (5.6.4-1) ... 1051s Setting up systemd-timesyncd (257.3-1ubuntu3) ... 1052s systemd-time-wait-sync.service is a disabled or a static unit not running, not starting it. 1052s Setting up libatomic1:amd64 (15-20250222-0ubuntu1) ... 1052s Setting up udev (257.3-1ubuntu3) ... 1052s Setting up linux-modules-6.14.0-10-generic (6.14.0-10.10) ... 1054s Setting up libncursesw6:amd64 (6.5+20250216-2) ... 1054s Setting up libpci3:amd64 (1:3.13.0-2) ... 1054s Setting up whiptail (0.52.24-4ubuntu2) ... 1054s Setting up python-apt-common (2.9.9build1) ... 1054s Setting up pnp.ids (0.393-3) ... 1054s Setting up libnl-3-200:amd64 (3.7.0-1) ... 1054s Setting up python3.13-minimal (3.13.2-2) ... 1055s Setting up libgpgme11t64:amd64 (1.24.2-1ubuntu2) ... 1055s Setting up libbinutils:amd64 (2.44-3ubuntu1) ... 1055s Setting up libc-dev-bin (2.41-1ubuntu1) ... 1055s Setting up libpython3.13-stdlib:amd64 (3.13.2-2) ... 1055s Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2ubuntu5) ... 1055s Setting up rsync (3.4.1+ds1-3) ... 1056s rsync.service is a disabled or a static unit not running, not starting it. 1056s Setting up python3.13-gdbm (3.13.2-2) ... 1056s Setting up libpython3-stdlib:amd64 (3.13.2-2) ... 1056s Setting up systemd-resolved (257.3-1ubuntu3) ... 1056s Setting up initramfs-tools-bin (0.146ubuntu1) ... 1056s Setting up ncurses-term (6.5+20250216-2) ... 1056s Setting up libctf0:amd64 (2.44-3ubuntu1) ... 1056s Setting up libpython3.13:amd64 (3.13.2-2) ... 1056s Setting up libdebuginfod1t64:amd64 (0.192-4) ... 1056s Setting up systemd-sysv (257.3-1ubuntu3) ... 1056s Setting up linux-headers-virtual (6.14.0-10.10) ... 1056s Setting up libcurl4t64:amd64 (8.12.1-3ubuntu1) ... 1056s Setting up python3.13 (3.13.2-2) ... 1057s Setting up htop (3.4.0-2) ... 1057s Setting up linux-image-6.14.0-10-generic (6.14.0-10.10) ... 1059s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.12.0-16-generic 1059s I: /boot/initrd.img.old is now a symlink to initrd.img-6.12.0-16-generic 1059s I: /boot/vmlinuz is now a symlink to vmlinuz-6.14.0-10-generic 1059s I: /boot/initrd.img is now a symlink to initrd.img-6.14.0-10-generic 1059s Setting up parted (3.6-5) ... 1059s Setting up libnss-systemd:amd64 (257.3-1ubuntu3) ... 1059s Setting up python3 (3.13.2-2) ... 1059s Setting up python3-newt:amd64 (0.52.24-4ubuntu2) ... 1059s Setting up python3-markupsafe (2.1.5-1build4) ... 1059s Setting up linux-modules-extra-6.14.0-10-generic (6.14.0-10.10) ... 1061s Setting up libnl-route-3-200:amd64 (3.7.0-1) ... 1061s Setting up hwdata (0.393-3) ... 1061s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 1061s Setting up libglib2.0-0t64:amd64 (2.84.0-1) ... 1061s No schema files found: doing nothing. 1061s Setting up libgprofng0:amd64 (2.44-3ubuntu1) ... 1061s Setting up linux-perf (6.14.0-10.10) ... 1061s Setting up gir1.2-glib-2.0:amd64 (2.84.0-1) ... 1061s Setting up pciutils (1:3.13.0-2) ... 1061s Setting up python3-rpds-py (0.21.0-2ubuntu2) ... 1061s Setting up libmm-glib0:amd64 (1.23.4-0ubuntu3) ... 1061s Setting up libnl-genl-3-200:amd64 (3.7.0-1) ... 1061s Setting up libpam-systemd:amd64 (257.3-1ubuntu3) ... 1061s Setting up libc6-dev:amd64 (2.41-1ubuntu1) ... 1061s Setting up libgirepository-1.0-1:amd64 (1.83.4-1) ... 1061s Setting up curl (8.12.1-3ubuntu1) ... 1061s Setting up linux-image-virtual (6.14.0-10.10) ... 1061s Setting up initramfs-tools-core (0.146ubuntu1) ... 1061s Setting up linux-tools-common (6.14.0-10.10) ... 1061s Setting up python3-systemd (235-1build6) ... 1061s Setting up python3-cffi-backend:amd64 (1.17.1-2build2) ... 1061s Setting up binutils-x86-64-linux-gnu (2.44-3ubuntu1) ... 1061s Setting up linux-image-generic (6.14.0-10.10) ... 1061s Setting up python3-dbus (1.3.2-5build5) ... 1061s Setting up linux-tools-6.14.0-10 (6.14.0-10.10) ... 1061s Setting up initramfs-tools (0.146ubuntu1) ... 1061s Installing new version of config file /etc/kernel/postinst.d/initramfs-tools ... 1061s Installing new version of config file /etc/kernel/postrm.d/initramfs-tools ... 1061s update-initramfs: deferring update (trigger activated) 1061s Setting up linux-generic (6.14.0-10.10) ... 1061s Setting up ubuntu-minimal (1.549) ... 1061s Setting up python3-apt (2.9.9build1) ... 1062s Setting up python3-bcrypt (4.2.0-2.1build1) ... 1062s Setting up python3-yaml (6.0.2-1build2) ... 1062s Setting up libfwupd3:amd64 (2.0.6-4) ... 1062s Setting up python3-lazr.uri (1.0.6-6) ... 1062s Setting up binutils (2.44-3ubuntu1) ... 1062s Setting up ubuntu-standard (1.549) ... 1062s Setting up cloud-init-base (25.1-0ubuntu3) ... 1063s Setting up linux-virtual (6.14.0-10.10) ... 1063s Setting up gir1.2-girepository-2.0:amd64 (1.83.4-1) ... 1063s Setting up python3-gi (3.50.0-4build1) ... 1063s Setting up linux-tools-6.14.0-10-generic (6.14.0-10.10) ... 1063s Setting up fwupd (2.0.6-4) ... 1064s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 1064s Setting up cloud-init (25.1-0ubuntu3) ... 1064s Processing triggers for man-db (2.13.0-1) ... 1066s Processing triggers for dbus (1.16.2-1ubuntu1) ... 1066s Processing triggers for shared-mime-info (2.4-5) ... 1066s Warning: program compiled against libxml 212 using older 209 1066s Processing triggers for libc-bin (2.41-1ubuntu1) ... 1066s Processing triggers for linux-image-6.14.0-10-generic (6.14.0-10.10) ... 1066s /etc/kernel/postinst.d/initramfs-tools: 1066s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 1066s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 1075s /etc/kernel/postinst.d/zz-update-grub: 1075s Sourcing file `/etc/default/grub' 1075s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 1075s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 1075s Generating grub configuration file ... 1075s Found linux image: /boot/vmlinuz-6.14.0-10-generic 1075s Found initrd image: /boot/initrd.img-6.14.0-10-generic 1075s Found linux image: /boot/vmlinuz-6.12.0-16-generic 1075s Found initrd image: /boot/initrd.img-6.12.0-16-generic 1075s Found linux image: /boot/vmlinuz-6.11.0-8-generic 1075s Found initrd image: /boot/initrd.img-6.11.0-8-generic 1075s Warning: os-prober will not be executed to detect other bootable partitions. 1075s Systems on them will not be added to the GRUB boot configuration. 1075s Check GRUB_DISABLE_OS_PROBER documentation entry. 1075s Adding boot menu entry for UEFI Firmware Settings ... 1075s done 1075s Processing triggers for initramfs-tools (0.146ubuntu1) ... 1075s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 1075s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 1085s Reading package lists... 1086s Building dependency tree... 1086s Reading state information... 1086s Solving dependencies... 1086s The following packages will be REMOVED: 1086s libnl-genl-3-200* libnsl2* libpython3.12-minimal* libpython3.12-stdlib* 1086s libpython3.12t64* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 1086s linux-headers-6.12.0-16* linux-headers-6.12.0-16-generic* 1086s linux-image-6.11.0-8-generic* linux-image-6.12.0-16-generic* 1086s linux-modules-6.11.0-8-generic* linux-modules-6.12.0-16-generic* 1086s linux-modules-extra-6.12.0-16-generic* linux-tools-6.11.0-8* 1086s linux-tools-6.11.0-8-generic* linux-tools-6.12.0-16* 1086s linux-tools-6.12.0-16-generic* 1086s 0 upgraded, 0 newly installed, 18 to remove and 5 not upgraded. 1086s After this operation, 545 MB disk space will be freed. 1086s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 148643 files and directories currently installed.) 1086s Removing libnl-genl-3-200:amd64 (3.7.0-1) ... 1086s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 1086s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 1086s Removing libpython3.12t64:amd64 (3.12.9-1) ... 1086s Removing libpython3.12-stdlib:amd64 (3.12.9-1) ... 1086s Removing libnsl2:amd64 (1.3.0-3build3) ... 1086s Removing libpython3.12-minimal:amd64 (3.12.9-1) ... 1086s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 1087s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 1089s Removing linux-headers-6.12.0-16-generic (6.12.0-16.16) ... 1089s Removing linux-headers-6.12.0-16 (6.12.0-16.16) ... 1091s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 1091s /etc/kernel/postrm.d/initramfs-tools: 1091s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 1091s /etc/kernel/postrm.d/zz-update-grub: 1091s Sourcing file `/etc/default/grub' 1091s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 1091s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 1091s Generating grub configuration file ... 1091s Found linux image: /boot/vmlinuz-6.14.0-10-generic 1091s Found initrd image: /boot/initrd.img-6.14.0-10-generic 1091s Found linux image: /boot/vmlinuz-6.12.0-16-generic 1091s Found initrd image: /boot/initrd.img-6.12.0-16-generic 1092s Warning: os-prober will not be executed to detect other bootable partitions. 1092s Systems on them will not be added to the GRUB boot configuration. 1092s Check GRUB_DISABLE_OS_PROBER documentation entry. 1092s Adding boot menu entry for UEFI Firmware Settings ... 1092s done 1092s Removing linux-image-6.12.0-16-generic (6.12.0-16.16) ... 1092s W: Removing the running kernel 1092s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic 1092s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic 1092s /etc/kernel/postrm.d/initramfs-tools: 1092s update-initramfs: Deleting /boot/initrd.img-6.12.0-16-generic 1092s /etc/kernel/postrm.d/zz-update-grub: 1092s Sourcing file `/etc/default/grub' 1092s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 1092s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 1092s Generating grub configuration file ... 1092s Found linux image: /boot/vmlinuz-6.14.0-10-generic 1092s Found initrd image: /boot/initrd.img-6.14.0-10-generic 1092s Warning: os-prober will not be executed to detect other bootable partitions. 1092s Systems on them will not be added to the GRUB boot configuration. 1092s Check GRUB_DISABLE_OS_PROBER documentation entry. 1092s Adding boot menu entry for UEFI Firmware Settings ... 1092s done 1092s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 1092s Removing linux-modules-extra-6.12.0-16-generic (6.12.0-16.16) ... 1094s Removing linux-modules-6.12.0-16-generic (6.12.0-16.16) ... 1094s Removing linux-tools-6.12.0-16-generic (6.12.0-16.16) ... 1094s Removing linux-tools-6.12.0-16 (6.12.0-16.16) ... 1094s Processing triggers for libc-bin (2.41-1ubuntu1) ... 1094s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76972 files and directories currently installed.) 1094s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 1094s Purging configuration files for libpython3.12-minimal:amd64 (3.12.9-1) ... 1094s Purging configuration files for linux-modules-extra-6.12.0-16-generic (6.12.0-16.16) ... 1094s Purging configuration files for linux-modules-6.12.0-16-generic (6.12.0-16.16) ... 1094s dpkg: warning: while removing linux-modules-6.12.0-16-generic, directory '/lib/modules/6.12.0-16-generic' not empty so not removed 1094s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 1094s Purging configuration files for linux-image-6.12.0-16-generic (6.12.0-16.16) ... 1094s rmdir: failed to remove '/lib/modules/6.12.0-16-generic': Directory not empty 1094s autopkgtest [14:58:33]: upgrading testbed (apt dist-upgrade and autopurge) 1094s Reading package lists... 1095s Building dependency tree... 1095s Reading state information... 1095s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 1095s Starting 2 pkgProblemResolver with broken count: 0 1095s Done 1095s Entering ResolveByKeep 1096s 1096s Calculating upgrade... 1096s The following packages will be upgraded: 1096s libc-bin libc-dev-bin libc6 libc6-dev locales 1096s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1096s Need to get 10.5 MB of archives. 1096s After this operation, 1024 B of additional disk space will be used. 1096s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6-dev amd64 2.41-1ubuntu2 [2183 kB] 1099s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-dev-bin amd64 2.41-1ubuntu2 [24.7 kB] 1099s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc6 amd64 2.41-1ubuntu2 [3327 kB] 1104s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libc-bin amd64 2.41-1ubuntu2 [700 kB] 1105s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 locales all 2.41-1ubuntu2 [4246 kB] 1111s Preconfiguring packages ... 1111s Fetched 10.5 MB in 14s (728 kB/s) 1111s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 1111s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_amd64.deb ... 1111s Unpacking libc6-dev:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 1111s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_amd64.deb ... 1111s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 1111s Preparing to unpack .../libc6_2.41-1ubuntu2_amd64.deb ... 1111s Unpacking libc6:amd64 (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 1111s Setting up libc6:amd64 (2.41-1ubuntu2) ... 1111s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 1111s Preparing to unpack .../libc-bin_2.41-1ubuntu2_amd64.deb ... 1111s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 1111s Setting up libc-bin (2.41-1ubuntu2) ... 1111s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 1111s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 1111s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 1112s Setting up locales (2.41-1ubuntu2) ... 1112s Generating locales (this might take a while)... 1113s en_US.UTF-8... done 1113s Generation complete. 1113s Setting up libc-dev-bin (2.41-1ubuntu2) ... 1114s Setting up libc6-dev:amd64 (2.41-1ubuntu2) ... 1114s Processing triggers for man-db (2.13.0-1) ... 1114s Processing triggers for systemd (257.3-1ubuntu3) ... 1115s Reading package lists... 1115s Building dependency tree... 1115s Reading state information... 1115s Starting pkgProblemResolver with broken count: 0 1115s Starting 2 pkgProblemResolver with broken count: 0 1115s Done 1115s Solving dependencies... 1116s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1116s autopkgtest [14:58:55]: rebooting testbed after setup commands that affected boot 1139s autopkgtest [14:59:18]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 16:07:00 UTC 2025 1141s autopkgtest [14:59:20]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-bluster 1143s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-bluster 1.16.0+dfsg-2 (dsc) [2259 B] 1143s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-bluster 1.16.0+dfsg-2 (tar) [59.4 kB] 1143s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-bluster 1.16.0+dfsg-2 (diff) [2916 B] 1143s gpgv: Signature made Sun Jan 12 11:30:19 2025 UTC 1143s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 1143s gpgv: issuer "crusoe@debian.org" 1143s gpgv: Can't check signature: No public key 1143s dpkg-source: warning: cannot verify inline signature for ./r-bioc-bluster_1.16.0+dfsg-2.dsc: no acceptable signature found 1143s autopkgtest [14:59:22]: testing package r-bioc-bluster version 1.16.0+dfsg-2 1144s autopkgtest [14:59:23]: build not needed 1146s autopkgtest [14:59:25]: test pkg-r-autopkgtest: preparing testbed 1146s Reading package lists... 1146s Building dependency tree... 1146s Reading state information... 1146s Starting pkgProblemResolver with broken count: 0 1146s Starting 2 pkgProblemResolver with broken count: 0 1146s Done 1147s The following NEW packages will be installed: 1147s build-essential comerr-dev cpp cpp-14 cpp-14-x86-64-linux-gnu 1147s cpp-x86-64-linux-gnu dctrl-tools fontconfig fontconfig-config 1147s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 1147s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-14 1147s g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 1147s gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-14 1147s gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu hdf5-helpers 1147s icu-devtools javascript-common krb5-multidev libaec-dev libaec0 libamd3 1147s libasan8 libbibtex-parser-perl libblas-dev libblas3 libblosc1 libboost-dev 1147s libboost1.83-dev libbrotli-dev libbz2-dev libcairo2 libcc1-0 libcolamd3 1147s libcurl4-openssl-dev libdatrie1 libdeflate-dev libdeflate0 libevent-2.1-7t64 1147s libfontconfig1 libgcc-14-dev libgfortran-14-dev libgfortran5 libglpk40 1147s libgmp-dev libgmpxx4ldbl libgnutls-dane0t64 libgnutls-openssl27t64 1147s libgnutls28-dev libgomp1 libgraphite2-3 libgsl28 libgslcblas0 libgssrpc4t64 1147s libharfbuzz0b libhdf5-310 libhdf5-cpp-310 libhdf5-dev libhdf5-fortran-310 1147s libhdf5-hl-310 libhdf5-hl-cpp-310 libhdf5-hl-fortran-310 libhnswlib-dev 1147s libhwasan0 libice6 libicu-dev libidn2-dev libio-string-perl libisl23 libitm1 1147s libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 1147s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 1147s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 1147s libjs-jquery-ui libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js 1147s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 1147s libjs-twitter-bootstrap-datepicker libkadm5clnt-mit12 libkadm5srv-mit12 1147s libkdb5-10t64 libkpathsea6 libkrb5-dev liblapack-dev liblapack3 1147s liblatex-tounicode-perl libldap-dev liblerc4 liblsan0 libltdl7 liblua5.4-0 1147s liblzma-dev libmpc3 libmpfi0 libncurses-dev libnghttp2-dev libp11-kit-dev 1147s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 1147s libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 1147s libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libpsl-dev libptexenc1 1147s libquadmath0 libreadline-dev librtmp-dev libsharpyuv0 libsm6 libsnappy1v5 1147s libssh2-1-dev libssl-dev libstdc++-14-dev libsuitesparseconfig7 libsynctex2 1147s libsz2 libtasn1-6-dev libtcl8.6 libteckit0 libtexlua53-5 libthai-data 1147s libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libunbound8 1147s libwebp7 libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 1147s libxrender1 libxss1 libxt6t64 libzstd-dev libzzip-0-13t64 littler nettle-dev 1147s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 1147s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 1147s r-bioc-alabaster.base r-bioc-alabaster.matrix r-bioc-alabaster.ranges 1147s r-bioc-alabaster.sce r-bioc-alabaster.schemas r-bioc-alabaster.se 1147s r-bioc-annotationdbi r-bioc-annotationfilter r-bioc-annotationhub 1147s r-bioc-assorthead r-bioc-beachmat r-bioc-biobase r-bioc-biocfilecache 1147s r-bioc-biocgenerics r-bioc-biocio r-bioc-biocneighbors r-bioc-biocparallel 1147s r-bioc-biocsingular r-bioc-biocstyle r-bioc-biocversion r-bioc-biostrings 1147s r-bioc-bluster r-bioc-delayedarray r-bioc-dirichletmultinomial r-bioc-edger 1147s r-bioc-ensembldb r-bioc-experimenthub r-bioc-genomeinfodb 1147s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 1147s r-bioc-genomicranges r-bioc-gypsum r-bioc-hdf5array r-bioc-iranges 1147s r-bioc-keggrest r-bioc-limma r-bioc-matrixgenerics r-bioc-metapod 1147s r-bioc-protgenerics r-bioc-rhdf5 r-bioc-rhdf5filters r-bioc-rhdf5lib 1147s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 1147s r-bioc-s4vectors r-bioc-scaledmatrix r-bioc-scater r-bioc-scran 1147s r-bioc-scrnaseq r-bioc-scuttle r-bioc-singlecellexperiment 1147s r-bioc-sparsearray r-bioc-summarizedexperiment r-bioc-ucsc.utils 1147s r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-apcluster r-cran-askpass 1147s r-cran-base64enc r-cran-beeswarm r-cran-bh r-cran-biocmanager r-cran-bit 1147s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown r-cran-brio 1147s r-cran-bslib r-cran-cachem r-cran-cairo r-cran-callr r-cran-cli 1147s r-cran-cluster r-cran-codetools r-cran-colorspace r-cran-commonmark 1147s r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-desc 1147s r-cran-diffobj r-cran-digest r-cran-dplyr r-cran-dqrng r-cran-dynamictreecut 1147s r-cran-evaluate r-cran-fansi r-cran-farver r-cran-fastcluster r-cran-fastmap 1147s r-cran-filelock r-cran-fnn r-cran-fontawesome r-cran-formatr r-cran-fs 1147s r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-ggbeeswarm 1147s r-cran-ggplot2 r-cran-ggrastr r-cran-ggrepel r-cran-glue r-cran-gridextra 1147s r-cran-gtable r-cran-highr r-cran-htmltools r-cran-httpuv r-cran-httr 1147s r-cran-httr2 r-cran-igraph r-cran-irlba r-cran-isoband r-cran-jquerylib 1147s r-cran-jsonlite r-cran-knitr r-cran-kohonen r-cran-labeling r-cran-lambda.r 1147s r-cran-later r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-littler 1147s r-cran-locfit r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats 1147s r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme 1147s r-cran-openssl r-cran-permute r-cran-pheatmap r-cran-pillar r-cran-pkgbuild 1147s r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-png 1147s r-cran-praise r-cran-processx r-cran-promises r-cran-ps r-cran-purrr 1147s r-cran-r6 r-cran-ragg r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp 1147s r-cran-rcppannoy r-cran-rcppeigen r-cran-rcppml r-cran-rcppprogress 1147s r-cran-rcurl r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown 1147s r-cran-rprojroot r-cran-rspectra r-cran-rsqlite r-cran-rsvd r-cran-rtsne 1147s r-cran-sass r-cran-scales r-cran-shiny r-cran-sitmo r-cran-snow 1147s r-cran-sourcetools r-cran-statmod r-cran-stringi r-cran-stringr r-cran-sys 1147s r-cran-systemfonts r-cran-testthat r-cran-textshaping r-cran-tibble 1147s r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-uwot 1147s r-cran-vctrs r-cran-vegan r-cran-vipor r-cran-viridis r-cran-viridislite 1147s r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml r-cran-xtable r-cran-yaml 1147s t1utils tex-common texlive-base texlive-bibtex-extra texlive-binaries 1147s texlive-latex-base unzip x11-common xdg-utils zip zlib1g-dev 1147s 0 upgraded, 405 newly installed, 0 to remove and 0 not upgraded. 1147s Need to get 528 MB of archives. 1147s After this operation, 1553 MB of additional disk space will be used. 1147s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 1148s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 1149s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [11.9 MB] 1173s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-17ubuntu3 [1030 B] 1173s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [5586 B] 1173s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.2.0-1ubuntu1 [22.4 kB] 1174s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 15-20250222-0ubuntu1 [47.0 kB] 1174s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 15-20250222-0ubuntu1 [148 kB] 1174s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 15-20250222-0ubuntu1 [28.6 kB] 1174s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 15-20250222-0ubuntu1 [3055 kB] 1178s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 15-20250222-0ubuntu1 [1355 kB] 1180s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 15-20250222-0ubuntu1 [2756 kB] 1184s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 15-20250222-0ubuntu1 [1205 kB] 1186s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 15-20250222-0ubuntu1 [1677 kB] 1189s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 15-20250222-0ubuntu1 [152 kB] 1189s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-17ubuntu3 [2816 kB] 1193s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [23.3 MB] 1224s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-17ubuntu3 [536 kB] 1225s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1208 B] 1225s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.2.0-1ubuntu1 [5004 B] 1225s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-17ubuntu3 [2486 kB] 1228s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [13.4 MB] 1245s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-17ubuntu3 [21.8 kB] 1245s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [968 B] 1245s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.2.0-1ubuntu1 [1100 B] 1245s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 1245s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 dctrl-tools amd64 2.24-3build3 [106 kB] 1245s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 1246s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 1247s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-2ubuntu1 [37.4 kB] 1247s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-2ubuntu1 [164 kB] 1248s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-2ubuntu1 [180 kB] 1248s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 1249s Get:34 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 1249s Get:35 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-lmodern all 2.005-1 [4799 kB] 1255s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 1258s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 15-20250222-0ubuntu1 [919 kB] 1259s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran-14-dev amd64 14.2.0-17ubuntu3 [966 kB] 1260s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [12.6 MB] 1276s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14 amd64 14.2.0-17ubuntu3 [13.6 kB] 1277s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.2.0-1ubuntu1 [1022 B] 1277s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran amd64 4:14.2.0-1ubuntu1 [1174 B] 1277s Get:43 http://ftpmaster.internal/ubuntu plucky/universe amd64 hdf5-helpers amd64 1.14.5+repack-3 [17.0 kB] 1277s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 icu-devtools amd64 76.1-1ubuntu2 [237 kB] 1277s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 12 [5216 B] 1277s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 comerr-dev amd64 2.1-1.47.2-1ubuntu1 [44.9 kB] 1277s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libgssrpc4t64 amd64 1.21.3-4ubuntu2 [58.1 kB] 1278s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libkadm5clnt-mit12 amd64 1.21.3-4ubuntu2 [41.3 kB] 1278s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libkdb5-10t64 amd64 1.21.3-4ubuntu2 [42.0 kB] 1278s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libkadm5srv-mit12 amd64 1.21.3-4ubuntu2 [55.5 kB] 1278s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 krb5-multidev amd64 1.21.3-4ubuntu2 [125 kB] 1278s Get:52 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 1278s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libsuitesparseconfig7 amd64 1:7.8.3+dfsg-3 [13.5 kB] 1279s Get:54 http://ftpmaster.internal/ubuntu plucky/universe amd64 libamd3 amd64 1:7.8.3+dfsg-3 [31.0 kB] 1279s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libio-string-perl all 1.08-4 [11.1 kB] 1279s Get:56 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblatex-tounicode-perl all 0.55-1 [28.8 kB] 1279s Get:57 http://ftpmaster.internal/ubuntu plucky/universe amd64 libbibtex-parser-perl all 1.05+dfsg-1 [16.5 kB] 1279s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 1279s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas-dev amd64 3.12.1-2 [338 kB] 1280s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libsnappy1v5 amd64 1.2.1-1 [30.4 kB] 1280s Get:61 http://ftpmaster.internal/ubuntu plucky/universe amd64 libblosc1 amd64 1.21.5+ds-1build1 [36.2 kB] 1280s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost1.83-dev amd64 1.83.0-4.1ubuntu2 [10.7 MB] 1293s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost-dev amd64 1.83.0.2ubuntu1 [4468 B] 1294s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libbrotli-dev amd64 1.1.0-2build4 [381 kB] 1294s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libbz2-dev amd64 1.0.8-6 [33.8 kB] 1294s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 1295s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 1295s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 1295s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 1295s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 1296s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libcolamd3 amd64 1:7.8.3+dfsg-3 [19.5 kB] 1296s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 libidn2-dev amd64 2.3.7-2build2 [120 kB] 1296s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libkrb5-dev amd64 1.21.3-4ubuntu2 [11.9 kB] 1296s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libldap-dev amd64 2.6.9+dfsg-1~exp2ubuntu1 [335 kB] 1297s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libpkgconf3 amd64 1.8.1-4 [32.3 kB] 1297s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf-bin amd64 1.8.1-4 [21.6 kB] 1297s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf amd64 1.8.1-4 [16.8 kB] 1297s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libnghttp2-dev amd64 1.64.0-1 [123 kB] 1297s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 libpsl-dev amd64 0.21.2-1.1build1 [76.4 kB] 1298s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-3ubuntu1 [10.0 kB] 1298s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-3ubuntu1 [341 kB] 1298s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10 [144 kB] 1298s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 libunbound8 amd64 1.22.0-1ubuntu1 [519 kB] 1299s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 libgnutls-dane0t64 amd64 3.8.9-2ubuntu2 [24.4 kB] 1299s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libgnutls-openssl27t64 amd64 3.8.9-2ubuntu2 [24.6 kB] 1299s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libp11-kit-dev amd64 0.25.5-2ubuntu3 [23.5 kB] 1299s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libtasn1-6-dev amd64 4.20.0-2 [98.1 kB] 1300s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 nettle-dev amd64 3.10.1-1 [1187 kB] 1301s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libgnutls28-dev amd64 3.8.9-2ubuntu2 [1118 kB] 1303s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 1304s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-2build7 [66.7 kB] 1304s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libssl-dev amd64 3.4.1-1ubuntu1 [2873 kB] 1308s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 libssh2-1-dev amd64 1.11.1-1 [292 kB] 1309s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 libzstd-dev amd64 1.5.6+dfsg-2 [444 kB] 1309s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4-openssl-dev amd64 8.12.1-3ubuntu1 [522 kB] 1310s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 1310s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB] 1310s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate-dev amd64 1.23-1 [71.7 kB] 1310s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl7 amd64 2.5.4-4 [46.5 kB] 1311s Get:100 http://ftpmaster.internal/ubuntu plucky/universe amd64 libglpk40 amd64 5.0-1build2 [369 kB] 1311s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 1312s Get:102 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgslcblas0 amd64 2.8+dfsg-5 [290 kB] 1312s Get:103 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgsl28 amd64 2.8+dfsg-5 [1285 kB] 1314s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB] 1315s Get:105 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 1315s Get:106 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-310 amd64 1.14.5+repack-3 [1519 kB] 1318s Get:107 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-cpp-310 amd64 1.14.5+repack-3 [129 kB] 1318s Get:108 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-fortran-310 amd64 1.14.5+repack-3 [108 kB] 1319s Get:109 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-310 amd64 1.14.5+repack-3 [62.6 kB] 1319s Get:110 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-fortran-310 amd64 1.14.5+repack-3 [32.4 kB] 1319s Get:111 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-cpp-310 amd64 1.14.5+repack-3 [11.7 kB] 1319s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 1319s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8-dev amd64 2.1.5-3ubuntu2 [324 kB] 1320s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 1320s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 1320s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 1320s Get:117 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec-dev amd64 1.1.3-1 [19.8 kB] 1320s Get:118 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-dev amd64 1.14.5+repack-3 [3505 kB] 1327s Get:119 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhnswlib-dev all 0.8.0-1build3 [24.4 kB] 1327s Get:120 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 1327s Get:121 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 1327s Get:122 http://ftpmaster.internal/ubuntu plucky/main amd64 libicu-dev amd64 76.1-1ubuntu2 [12.6 MB] 1350s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 1350s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 1350s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 1352s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-d3 all 3.5.17-4 [132 kB] 1352s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 1352s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 1353s Get:129 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 1353s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 1354s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 1354s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 1354s Get:133 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 1354s Get:134 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 1354s Get:135 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 1354s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 1355s Get:137 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 1355s Get:138 http://ftpmaster.internal/ubuntu plucky/main amd64 libkpathsea6 amd64 2024.20240313.70630+ds-5build2 [67.0 kB] 1355s Get:139 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 1359s Get:140 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack-dev amd64 3.12.1-2 [6489 kB] 1367s Get:141 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 1368s Get:142 http://ftpmaster.internal/ubuntu plucky/main amd64 liblua5.4-0 amd64 5.4.7-1 [196 kB] 1368s Get:143 http://ftpmaster.internal/ubuntu plucky/universe amd64 libmpfi0 amd64 1.5.4+ds-4 [35.5 kB] 1368s Get:144 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses-dev amd64 6.5+20250216-2 [424 kB] 1369s Get:145 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 1369s Get:146 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 1369s Get:147 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.56.2-1 [255 kB] 1370s Get:148 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.56.2-1 [52.6 kB] 1370s Get:149 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.56.2-1 [29.1 kB] 1370s Get:150 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB] 1370s Get:151 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB] 1370s Get:152 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.45-1 [268 kB] 1371s Get:153 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-32-0 amd64 10.45-1 [251 kB] 1371s Get:154 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-posix3 amd64 10.45-1 [7204 B] 1371s Get:155 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-dev amd64 10.45-1 [908 kB] 1373s Get:156 http://ftpmaster.internal/ubuntu plucky/main amd64 libpng-dev amd64 1.6.47-1 [298 kB] 1373s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 libpotrace0 amd64 1.16-2build1 [17.7 kB] 1373s Get:158 http://ftpmaster.internal/ubuntu plucky/main amd64 libptexenc1 amd64 2024.20240313.70630+ds-5build2 [43.7 kB] 1373s Get:159 http://ftpmaster.internal/ubuntu plucky/main amd64 libreadline-dev amd64 8.2-6 [184 kB] 1374s Get:160 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 1374s Get:161 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 1374s Get:162 http://ftpmaster.internal/ubuntu plucky/main amd64 libsynctex2 amd64 2024.20240313.70630+ds-5build2 [62.5 kB] 1374s Get:163 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB] 1375s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 libteckit0 amd64 2.5.12+ds1-1 [411 kB] 1376s Get:165 http://ftpmaster.internal/ubuntu plucky/main amd64 libtexlua53-5 amd64 2024.20240313.70630+ds-5build2 [145 kB] 1376s Get:166 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 1376s Get:167 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 1377s Get:168 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 1378s Get:169 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 1378s Get:170 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 1378s Get:171 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB] 1379s Get:172 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 1379s Get:173 http://ftpmaster.internal/ubuntu plucky/main amd64 libxmu6 amd64 2:1.1.3-3build2 [47.6 kB] 1380s Get:174 http://ftpmaster.internal/ubuntu plucky/main amd64 libxpm4 amd64 1:3.5.17-1build2 [36.5 kB] 1380s Get:175 http://ftpmaster.internal/ubuntu plucky/main amd64 libxaw7 amd64 2:1.0.16-1 [207 kB] 1380s Get:176 http://ftpmaster.internal/ubuntu plucky/main amd64 libxi6 amd64 2:1.8.2-1 [32.4 kB] 1380s Get:177 http://ftpmaster.internal/ubuntu plucky/universe amd64 libzzip-0-13t64 amd64 0.13.78+dfsg.1-0.1 [30.0 kB] 1380s Get:178 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu2 [185 kB] 1381s Get:179 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB] 1381s Get:180 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 1381s Get:181 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.3-1 [28.9 MB] 1419s Get:182 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-2 [96.6 kB] 1419s Get:183 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-2 [2554 B] 1419s Get:184 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 1420s Get:185 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 1420s Get:186 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 1420s Get:187 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 1420s Get:188 http://ftpmaster.internal/ubuntu plucky/universe amd64 pandoc amd64 3.1.11.1+ds-2 [27.2 MB] 1455s Get:189 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma-dev amd64 5.6.4-1 [189 kB] 1456s Get:190 http://ftpmaster.internal/ubuntu plucky/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3 [193 kB] 1456s Get:191 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-dev all 4.4.3-1 [4176 B] 1456s Get:192 http://ftpmaster.internal/ubuntu plucky/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 1456s Get:193 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 1457s Get:194 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-alabaster.schemas all 1.6.0+ds-2 [24.9 kB] 1457s Get:195 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2065 kB] 1459s Get:196 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rhdf5lib amd64 1.28.0+dfsg-2build1 [97.4 kB] 1459s Get:197 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rhdf5filters amd64 1.18.0+dfsg-2 [137 kB] 1460s Get:198 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rhdf5 amd64 2.50.2+dfsg-1build1 [822 kB] 1461s Get:199 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB] 1461s Get:200 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 1462s Get:201 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.14-1 [1998 kB] 1464s Get:202 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-alabaster.base amd64 1.6.1+ds-2build1 [800 kB] 1465s Get:203 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 1467s Get:204 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrix amd64 1.7-3-1 [4349 kB] 1472s Get:205 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrixstats amd64 1.5.0-1 [542 kB] 1472s Get:206 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 1473s Get:207 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-iranges amd64 2.40.1-2 [2310 kB] 1477s Get:208 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-abind all 1.4-8-1 [66.9 kB] 1477s Get:209 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB] 1478s Get:210 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-s4arrays amd64 1.6.0+dfsg-2 [698 kB] 1479s Get:211 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 1479s Get:212 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-xvector amd64 0.46.0-2 [620 kB] 1480s Get:213 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-sparsearray amd64 1.6.2+dfsg-1 [1392 kB] 1482s Get:214 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-delayedarray amd64 0.32.0+dfsg-2 [2064 kB] 1485s Get:215 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-hdf5array amd64 1.34.0-2build1 [8792 kB] 1500s Get:216 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-alabaster.matrix amd64 1.6.1+ds-2 [443 kB] 1501s Get:217 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-curl amd64 6.2.1+dfsg-1ubuntu1 [197 kB] 1501s Get:218 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 1502s Get:219 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB] 1502s Get:220 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB] 1502s Get:221 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-openssl amd64 2.3.2+dfsg-1 [407 kB] 1503s Get:222 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB] 1503s Get:223 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 1504s Get:224 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 1504s Get:225 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 1525s Get:226 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 1531s Get:227 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomicranges amd64 1.58.0+dfsg-2 [2083 kB] 1535s Get:228 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-alabaster.ranges all 1.6.0+ds-2 [100 kB] 1535s Get:229 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biobase amd64 2.66.0-2 [2332 kB] 1539s Get:230 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 1540s Get:231 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-singlecellexperiment all 1.28.1+ds-2 [829 kB] 1542s Get:232 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-alabaster.se all 1.6.0+ds-2 [87.0 kB] 1542s Get:233 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-alabaster.sce all 1.6.0+ds-2 [83.6 kB] 1542s Get:234 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dbi all 1.2.3-1 [853 kB] 1544s Get:235 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bit amd64 4.6.0+dfsg-1 [466 kB] 1545s Get:236 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bit64 amd64 4.6.0-1-1ubuntu2 [501 kB] 1546s Get:237 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.5-1 [1719 kB] 1549s Get:238 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB] 1551s Get:239 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 1551s Get:240 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 1552s Get:241 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 1554s Get:242 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-blob all 1.2.4-1 [49.8 kB] 1554s Get:243 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 1555s Get:244 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 1555s Get:245 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB] 1555s Get:246 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 1555s Get:247 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plogr all 0.2.0-3build1 [15.1 kB] 1555s Get:248 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cpp11 all 0.5.2-1 [233 kB] 1556s Get:249 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rsqlite amd64 2.3.9-1 [1467 kB] 1558s Get:250 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-png amd64 0.1-8-1build2 [40.6 kB] 1558s Get:251 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biostrings amd64 2.74.1+dfsg-2 [13.3 MB] 1581s Get:252 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-keggrest all 1.46.0+dfsg-2 [183 kB] 1582s Get:253 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-annotationdbi all 1.68.0-2 [4857 kB] 1591s Get:254 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lazyeval amd64 0.2.2-1build1 [144 kB] 1591s Get:255 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-annotationfilter all 1.30.0+dfsg-2 [247 kB] 1592s Get:256 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB] 1592s Get:257 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 1592s Get:258 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 1593s Get:259 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 1593s Get:260 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 1595s Get:261 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB] 1595s Get:262 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 1596s Get:263 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB] 1596s Get:264 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB] 1599s Get:265 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-purrr amd64 1.0.4-1 [552 kB] 1600s Get:266 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringi amd64 1.8.4-1build1 [927 kB] 1601s Get:267 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 1602s Get:268 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 1604s Get:269 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dbplyr all 2.5.0+dfsg-1 [1233 kB] 1606s Get:270 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-filelock amd64 1.0.3-1 [29.6 kB] 1606s Get:271 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocfilecache all 2.14.0+dfsg-2 [300 kB] 1607s Get:272 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 1607s Get:273 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocversion all 3.20.0-2 [11.1 kB] 1607s Get:274 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB] 1607s Get:275 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB] 1608s Get:276 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-annotationhub all 3.14.0+dfsg-2 [447 kB] 1608s Get:277 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-assorthead all 1.0.1+ds-2 [194 kB] 1609s Get:278 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-beachmat amd64 2.22.0+ds-2 [976 kB] 1610s Get:279 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 1610s Get:280 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocneighbors amd64 2.0.1+ds-2 [446 kB] 1611s Get:281 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-formatr all 1.14-2 [152 kB] 1612s Get:282 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 1612s Get:283 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 1612s Get:284 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 1612s Get:285 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 1612s Get:286 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-codetools all 0.2-20-1 [90.5 kB] 1613s Get:287 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bh all 1.84.0-1 [5962 B] 1613s Get:288 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocparallel amd64 1.40.0-2 [1337 kB] 1615s Get:289 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-scaledmatrix all 1.14.0+dfsg-2 [324 kB] 1615s Get:290 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-irlba amd64 2.3.5.1-4 [295 kB] 1616s Get:291 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rsvd all 1.0.5-1 [3589 kB] 1621s Get:292 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocsingular amd64 1.22.0+ds-2 [357 kB] 1622s Get:293 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB] 1622s Get:294 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB] 1622s Get:295 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 1623s Get:296 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-evaluate all 1.0.3-1 [114 kB] 1623s Get:297 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xfun amd64 0.51+dfsg-1 [574 kB] 1624s Get:298 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 1624s Get:299 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 1632s Get:300 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-knitr all 1.49+dfsg-1 [859 kB] 1634s Get:301 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 1634s Get:302 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB] 1634s Get:303 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 1636s Get:304 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 1641s Get:305 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 1643s Get:306 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tinytex all 0.56-1 [148 kB] 1644s Get:307 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-modernizr all 3.13.0-0.1 [101 kB] 1644s Get:308 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB] 1644s Get:309 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB] 1645s Get:310 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 1645s Get:311 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] 1646s Get:312 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 1646s Get:313 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-commonmark amd64 1.9.2-2 [137 kB] 1647s Get:314 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 1647s Get:315 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 1650s Get:316 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 1652s Get:317 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bookdown all 0.42+dfsg-1 [1409 kB] 1653s Get:318 http://ftpmaster.internal/ubuntu plucky/universe amd64 tex-common all 6.19 [29.8 kB] 1653s Get:319 http://ftpmaster.internal/ubuntu plucky/main amd64 t1utils amd64 1.41-4build3 [61.3 kB] 1654s Get:320 http://ftpmaster.internal/ubuntu plucky/universe amd64 texlive-binaries amd64 2024.20240313.70630+ds-5build2 [9799 kB] 1664s Get:321 http://ftpmaster.internal/ubuntu plucky/universe amd64 texlive-base all 2024.20250114-1 [22.5 MB] 1687s Get:322 http://ftpmaster.internal/ubuntu plucky/universe amd64 texlive-latex-base all 2024.20250114-1 [1264 kB] 1688s Get:323 http://ftpmaster.internal/ubuntu plucky/universe amd64 texlive-bibtex-extra all 2024.20250114-1 [79.5 MB] 1770s Get:324 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-biocstyle all 2.34.0+dfsg-1 [451 kB] 1770s Get:325 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cluster amd64 2.1.8-1 [579 kB] 1771s Get:326 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-igraph amd64 2.1.4-1 [5357 kB] 1777s Get:327 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-bluster amd64 1.16.0+dfsg-2 [545 kB] 1777s Get:328 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-dirichletmultinomial amd64 1.48.0-2 [1260 kB] 1779s Get:329 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-statmod amd64 1.5.0-1 [295 kB] 1779s Get:330 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-limma amd64 3.62.2+dfsg-1 [1969 kB] 1781s Get:331 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-locfit amd64 1.5-9.12-1 [552 kB] 1782s Get:332 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-edger amd64 4.4.2+dfsg-1 [1120 kB] 1784s Get:333 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-xml amd64 3.99-0.18-1 [1748 kB] 1786s Get:334 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-bitops amd64 1.0-9-1 [30.3 kB] 1786s Get:335 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rhtslib amd64 3.2.0+dfsg-2 [1499 kB] 1788s Get:336 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rsamtools amd64 2.22.0+dfsg-2 [3745 kB] 1792s Get:337 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomicalignments amd64 1.42.0-2 [2165 kB] 1794s Get:338 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcurl amd64 1.98-1.16+dfsg-1 [807 kB] 1795s Get:339 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rjson amd64 0.2.23-1 [104 kB] 1796s Get:340 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-restfulr amd64 0.0.15-1 [380 kB] 1796s Get:341 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-rtracklayer amd64 1.66.0-2 [5227 kB] 1801s Get:342 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-genomicfeatures all 1.58.0+dfsg-2 [937 kB] 1802s Get:343 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-protgenerics all 1.38.0-2 [239 kB] 1803s Get:344 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-ensembldb all 2.30.0+dfsg-3 [1520 kB] 1805s Get:345 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-experimenthub all 2.14.0+ds-2 [84.6 kB] 1805s Get:346 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-httr2 all 1.1.1-1 [752 kB] 1806s Get:347 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-gypsum all 1.2.0+ds-2 [212 kB] 1806s Get:348 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-metapod amd64 1.14.0+dfsg-2 [233 kB] 1806s Get:349 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-scuttle amd64 1.16.0+dfsg-3 [459 kB] 1807s Get:350 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 1807s Get:351 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 1809s Get:352 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mass amd64 7.3-64-1 [1114 kB] 1810s Get:353 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nlme amd64 3.1.167-1 [2320 kB] 1812s Get:354 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB] 1816s Get:355 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB] 1817s Get:356 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 1818s Get:357 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colorspace amd64 2.1-1+dfsg-1 [1563 kB] 1819s Get:358 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-munsell all 0.5.1-1 [213 kB] 1819s Get:359 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 1820s Get:360 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridislite all 0.4.2-2 [1088 kB] 1821s Get:361 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scales all 1.3.0-1 [603 kB] 1821s Get:362 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 1826s Get:363 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-beeswarm amd64 0.4.0-1 [82.3 kB] 1826s Get:364 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vipor all 0.4.7-1 [4624 kB] 1831s Get:365 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggbeeswarm all 0.7.2-1 [1732 kB] 1833s Get:366 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gridextra all 2.3-3build1 [1024 kB] 1834s Get:367 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridis all 0.6.5-1 [2770 kB] 1837s Get:368 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rtsne amd64 0.17-1 [109 kB] 1837s Get:369 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1428 kB] 1839s Get:370 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppml amd64 0.3.7-2 [180 kB] 1839s Get:371 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fnn amd64 1.1.4.1-1 [126 kB] 1839s Get:372 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppannoy amd64 0.0.22-1 [235 kB] 1839s Get:373 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rspectra amd64 0.16-2-1 [448 kB] 1840s Get:374 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-sitmo amd64 2.0.2-1 [130 kB] 1840s Get:375 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dqrng amd64 0.3.2+dfsg-1 [161 kB] 1840s Get:376 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcppprogress all 0.4.2-2build1 [22.0 kB] 1840s Get:377 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-uwot amd64 0.2.3-1 [1080 kB] 1842s Get:378 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pheatmap all 1.0.12-2build1 [78.2 kB] 1842s Get:379 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggrepel amd64 0.9.6-1 [270 kB] 1842s Get:380 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cairo amd64 1.6-2-1 [88.8 kB] 1842s Get:381 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-systemfonts amd64 1.2.1-1 [347 kB] 1843s Get:382 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-textshaping amd64 0.3.7-2 [95.5 kB] 1843s Get:383 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ragg amd64 1.3.3-1 [510 kB] 1844s Get:384 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggrastr all 1.0.2-1 [2566 kB] 1846s Get:385 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-scater all 1.34.1+ds-1 [472 kB] 1847s Get:386 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-scran amd64 1.34.0+dfsg-3 [1033 kB] 1848s Get:387 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-bioc-scrnaseq all 2.20.0+ds-2 [309 kB] 1848s Get:388 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-apcluster amd64 1.4.13-1 [1406 kB] 1850s Get:389 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 1850s Get:390 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ps amd64 1.9.0-1 [408 kB] 1850s Get:391 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-processx amd64 3.8.6-1 [365 kB] 1851s Get:392 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 1852s Get:393 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 1852s Get:394 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 1854s Get:395 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-dynamictreecut all 1.63-1-3build1 [91.4 kB] 1854s Get:396 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fastcluster amd64 1.2.6-2 [197 kB] 1854s Get:397 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-kohonen amd64 3.0.12+dfsg-1 [1700 kB] 1857s Get:398 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-permute all 0.9-7-1 [228 kB] 1857s Get:399 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgbuild all 1.4.6-1 [213 kB] 1857s Get:400 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rprojroot all 2.0.4-2 [125 kB] 1857s Get:401 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgload all 1.4.0-1 [247 kB] 1858s Get:402 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 1858s Get:403 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-waldo all 0.6.1-2 [150 kB] 1858s Get:404 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-testthat amd64 3.2.3-1 [1651 kB] 1860s Get:405 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vegan amd64 2.6-10+dfsg-1ubuntu2 [3145 kB] 1864s Preconfiguring packages ... 1864s Fetched 528 MB in 11min 57s (736 kB/s) 1864s Selecting previously unselected package libisl23:amd64. 1864s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 1864s Preparing to unpack .../000-libisl23_0.27-1_amd64.deb ... 1864s Unpacking libisl23:amd64 (0.27-1) ... 1864s Selecting previously unselected package libmpc3:amd64. 1864s Preparing to unpack .../001-libmpc3_1.3.1-1build2_amd64.deb ... 1864s Unpacking libmpc3:amd64 (1.3.1-1build2) ... 1864s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 1864s Preparing to unpack .../002-cpp-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 1864s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 1865s Selecting previously unselected package cpp-14. 1865s Preparing to unpack .../003-cpp-14_14.2.0-17ubuntu3_amd64.deb ... 1865s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 1865s Selecting previously unselected package cpp-x86-64-linux-gnu. 1865s Preparing to unpack .../004-cpp-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 1865s Unpacking cpp-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 1865s Selecting previously unselected package cpp. 1865s Preparing to unpack .../005-cpp_4%3a14.2.0-1ubuntu1_amd64.deb ... 1865s Unpacking cpp (4:14.2.0-1ubuntu1) ... 1865s Selecting previously unselected package libcc1-0:amd64. 1865s Preparing to unpack .../006-libcc1-0_15-20250222-0ubuntu1_amd64.deb ... 1865s Unpacking libcc1-0:amd64 (15-20250222-0ubuntu1) ... 1865s Selecting previously unselected package libgomp1:amd64. 1865s Preparing to unpack .../007-libgomp1_15-20250222-0ubuntu1_amd64.deb ... 1865s Unpacking libgomp1:amd64 (15-20250222-0ubuntu1) ... 1865s Selecting previously unselected package libitm1:amd64. 1865s Preparing to unpack .../008-libitm1_15-20250222-0ubuntu1_amd64.deb ... 1865s Unpacking libitm1:amd64 (15-20250222-0ubuntu1) ... 1865s Selecting previously unselected package libasan8:amd64. 1865s Preparing to unpack .../009-libasan8_15-20250222-0ubuntu1_amd64.deb ... 1865s Unpacking libasan8:amd64 (15-20250222-0ubuntu1) ... 1865s Selecting previously unselected package liblsan0:amd64. 1865s Preparing to unpack .../010-liblsan0_15-20250222-0ubuntu1_amd64.deb ... 1865s Unpacking liblsan0:amd64 (15-20250222-0ubuntu1) ... 1865s Selecting previously unselected package libtsan2:amd64. 1865s Preparing to unpack .../011-libtsan2_15-20250222-0ubuntu1_amd64.deb ... 1865s Unpacking libtsan2:amd64 (15-20250222-0ubuntu1) ... 1865s Selecting previously unselected package libubsan1:amd64. 1865s Preparing to unpack .../012-libubsan1_15-20250222-0ubuntu1_amd64.deb ... 1865s Unpacking libubsan1:amd64 (15-20250222-0ubuntu1) ... 1865s Selecting previously unselected package libhwasan0:amd64. 1865s Preparing to unpack .../013-libhwasan0_15-20250222-0ubuntu1_amd64.deb ... 1865s Unpacking libhwasan0:amd64 (15-20250222-0ubuntu1) ... 1865s Selecting previously unselected package libquadmath0:amd64. 1865s Preparing to unpack .../014-libquadmath0_15-20250222-0ubuntu1_amd64.deb ... 1865s Unpacking libquadmath0:amd64 (15-20250222-0ubuntu1) ... 1865s Selecting previously unselected package libgcc-14-dev:amd64. 1865s Preparing to unpack .../015-libgcc-14-dev_14.2.0-17ubuntu3_amd64.deb ... 1865s Unpacking libgcc-14-dev:amd64 (14.2.0-17ubuntu3) ... 1865s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 1865s Preparing to unpack .../016-gcc-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 1865s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 1865s Selecting previously unselected package gcc-14. 1865s Preparing to unpack .../017-gcc-14_14.2.0-17ubuntu3_amd64.deb ... 1865s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 1865s Selecting previously unselected package gcc-x86-64-linux-gnu. 1865s Preparing to unpack .../018-gcc-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 1865s Unpacking gcc-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 1865s Selecting previously unselected package gcc. 1865s Preparing to unpack .../019-gcc_4%3a14.2.0-1ubuntu1_amd64.deb ... 1865s Unpacking gcc (4:14.2.0-1ubuntu1) ... 1865s Selecting previously unselected package libstdc++-14-dev:amd64. 1866s Preparing to unpack .../020-libstdc++-14-dev_14.2.0-17ubuntu3_amd64.deb ... 1866s Unpacking libstdc++-14-dev:amd64 (14.2.0-17ubuntu3) ... 1866s Selecting previously unselected package g++-14-x86-64-linux-gnu. 1866s Preparing to unpack .../021-g++-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 1866s Unpacking g++-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 1866s Selecting previously unselected package g++-14. 1866s Preparing to unpack .../022-g++-14_14.2.0-17ubuntu3_amd64.deb ... 1866s Unpacking g++-14 (14.2.0-17ubuntu3) ... 1866s Selecting previously unselected package g++-x86-64-linux-gnu. 1866s Preparing to unpack .../023-g++-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 1866s Unpacking g++-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 1866s Selecting previously unselected package g++. 1866s Preparing to unpack .../024-g++_4%3a14.2.0-1ubuntu1_amd64.deb ... 1866s Unpacking g++ (4:14.2.0-1ubuntu1) ... 1866s Selecting previously unselected package build-essential. 1866s Preparing to unpack .../025-build-essential_12.10ubuntu1_amd64.deb ... 1866s Unpacking build-essential (12.10ubuntu1) ... 1866s Selecting previously unselected package dctrl-tools. 1866s Preparing to unpack .../026-dctrl-tools_2.24-3build3_amd64.deb ... 1866s Unpacking dctrl-tools (2.24-3build3) ... 1866s Selecting previously unselected package fonts-dejavu-mono. 1866s Preparing to unpack .../027-fonts-dejavu-mono_2.37-8_all.deb ... 1866s Unpacking fonts-dejavu-mono (2.37-8) ... 1866s Selecting previously unselected package fonts-dejavu-core. 1866s Preparing to unpack .../028-fonts-dejavu-core_2.37-8_all.deb ... 1866s Unpacking fonts-dejavu-core (2.37-8) ... 1866s Selecting previously unselected package fontconfig-config. 1866s Preparing to unpack .../029-fontconfig-config_2.15.0-2ubuntu1_amd64.deb ... 1866s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 1866s Selecting previously unselected package libfontconfig1:amd64. 1866s Preparing to unpack .../030-libfontconfig1_2.15.0-2ubuntu1_amd64.deb ... 1866s Unpacking libfontconfig1:amd64 (2.15.0-2ubuntu1) ... 1866s Selecting previously unselected package fontconfig. 1866s Preparing to unpack .../031-fontconfig_2.15.0-2ubuntu1_amd64.deb ... 1866s Unpacking fontconfig (2.15.0-2ubuntu1) ... 1866s Selecting previously unselected package fonts-font-awesome. 1866s Preparing to unpack .../032-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 1866s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 1866s Selecting previously unselected package fonts-glyphicons-halflings. 1866s Preparing to unpack .../033-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 1866s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 1866s Selecting previously unselected package fonts-lmodern. 1866s Preparing to unpack .../034-fonts-lmodern_2.005-1_all.deb ... 1866s Unpacking fonts-lmodern (2.005-1) ... 1866s Selecting previously unselected package fonts-mathjax. 1866s Preparing to unpack .../035-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 1866s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 1867s Selecting previously unselected package libgfortran5:amd64. 1867s Preparing to unpack .../036-libgfortran5_15-20250222-0ubuntu1_amd64.deb ... 1867s Unpacking libgfortran5:amd64 (15-20250222-0ubuntu1) ... 1867s Selecting previously unselected package libgfortran-14-dev:amd64. 1867s Preparing to unpack .../037-libgfortran-14-dev_14.2.0-17ubuntu3_amd64.deb ... 1867s Unpacking libgfortran-14-dev:amd64 (14.2.0-17ubuntu3) ... 1867s Selecting previously unselected package gfortran-14-x86-64-linux-gnu. 1867s Preparing to unpack .../038-gfortran-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 1867s Unpacking gfortran-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 1867s Selecting previously unselected package gfortran-14. 1867s Preparing to unpack .../039-gfortran-14_14.2.0-17ubuntu3_amd64.deb ... 1867s Unpacking gfortran-14 (14.2.0-17ubuntu3) ... 1867s Selecting previously unselected package gfortran-x86-64-linux-gnu. 1867s Preparing to unpack .../040-gfortran-x86-64-linux-gnu_4%3a14.2.0-1ubuntu1_amd64.deb ... 1867s Unpacking gfortran-x86-64-linux-gnu (4:14.2.0-1ubuntu1) ... 1867s Selecting previously unselected package gfortran. 1867s Preparing to unpack .../041-gfortran_4%3a14.2.0-1ubuntu1_amd64.deb ... 1867s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 1867s Selecting previously unselected package hdf5-helpers. 1867s Preparing to unpack .../042-hdf5-helpers_1.14.5+repack-3_amd64.deb ... 1867s Unpacking hdf5-helpers (1.14.5+repack-3) ... 1867s Selecting previously unselected package icu-devtools. 1867s Preparing to unpack .../043-icu-devtools_76.1-1ubuntu2_amd64.deb ... 1867s Unpacking icu-devtools (76.1-1ubuntu2) ... 1867s Selecting previously unselected package javascript-common. 1867s Preparing to unpack .../044-javascript-common_12_all.deb ... 1867s Unpacking javascript-common (12) ... 1867s Selecting previously unselected package comerr-dev:amd64. 1867s Preparing to unpack .../045-comerr-dev_2.1-1.47.2-1ubuntu1_amd64.deb ... 1867s Unpacking comerr-dev:amd64 (2.1-1.47.2-1ubuntu1) ... 1867s Selecting previously unselected package libgssrpc4t64:amd64. 1867s Preparing to unpack .../046-libgssrpc4t64_1.21.3-4ubuntu2_amd64.deb ... 1867s Unpacking libgssrpc4t64:amd64 (1.21.3-4ubuntu2) ... 1867s Selecting previously unselected package libkadm5clnt-mit12:amd64. 1867s Preparing to unpack .../047-libkadm5clnt-mit12_1.21.3-4ubuntu2_amd64.deb ... 1867s Unpacking libkadm5clnt-mit12:amd64 (1.21.3-4ubuntu2) ... 1867s Selecting previously unselected package libkdb5-10t64:amd64. 1867s Preparing to unpack .../048-libkdb5-10t64_1.21.3-4ubuntu2_amd64.deb ... 1867s Unpacking libkdb5-10t64:amd64 (1.21.3-4ubuntu2) ... 1867s Selecting previously unselected package libkadm5srv-mit12:amd64. 1867s Preparing to unpack .../049-libkadm5srv-mit12_1.21.3-4ubuntu2_amd64.deb ... 1867s Unpacking libkadm5srv-mit12:amd64 (1.21.3-4ubuntu2) ... 1867s Selecting previously unselected package krb5-multidev:amd64. 1867s Preparing to unpack .../050-krb5-multidev_1.21.3-4ubuntu2_amd64.deb ... 1867s Unpacking krb5-multidev:amd64 (1.21.3-4ubuntu2) ... 1867s Selecting previously unselected package libaec0:amd64. 1867s Preparing to unpack .../051-libaec0_1.1.3-1_amd64.deb ... 1867s Unpacking libaec0:amd64 (1.1.3-1) ... 1867s Selecting previously unselected package libsuitesparseconfig7:amd64. 1867s Preparing to unpack .../052-libsuitesparseconfig7_1%3a7.8.3+dfsg-3_amd64.deb ... 1867s Unpacking libsuitesparseconfig7:amd64 (1:7.8.3+dfsg-3) ... 1867s Selecting previously unselected package libamd3:amd64. 1867s Preparing to unpack .../053-libamd3_1%3a7.8.3+dfsg-3_amd64.deb ... 1867s Unpacking libamd3:amd64 (1:7.8.3+dfsg-3) ... 1867s Selecting previously unselected package libio-string-perl. 1867s Preparing to unpack .../054-libio-string-perl_1.08-4_all.deb ... 1867s Unpacking libio-string-perl (1.08-4) ... 1867s Selecting previously unselected package liblatex-tounicode-perl. 1867s Preparing to unpack .../055-liblatex-tounicode-perl_0.55-1_all.deb ... 1867s Unpacking liblatex-tounicode-perl (0.55-1) ... 1867s Selecting previously unselected package libbibtex-parser-perl. 1867s Preparing to unpack .../056-libbibtex-parser-perl_1.05+dfsg-1_all.deb ... 1867s Unpacking libbibtex-parser-perl (1.05+dfsg-1) ... 1867s Selecting previously unselected package libblas3:amd64. 1867s Preparing to unpack .../057-libblas3_3.12.1-2_amd64.deb ... 1867s Unpacking libblas3:amd64 (3.12.1-2) ... 1867s Selecting previously unselected package libblas-dev:amd64. 1867s Preparing to unpack .../058-libblas-dev_3.12.1-2_amd64.deb ... 1867s Unpacking libblas-dev:amd64 (3.12.1-2) ... 1867s Selecting previously unselected package libsnappy1v5:amd64. 1867s Preparing to unpack .../059-libsnappy1v5_1.2.1-1_amd64.deb ... 1867s Unpacking libsnappy1v5:amd64 (1.2.1-1) ... 1867s Selecting previously unselected package libblosc1:amd64. 1867s Preparing to unpack .../060-libblosc1_1.21.5+ds-1build1_amd64.deb ... 1867s Unpacking libblosc1:amd64 (1.21.5+ds-1build1) ... 1868s Selecting previously unselected package libboost1.83-dev:amd64. 1868s Preparing to unpack .../061-libboost1.83-dev_1.83.0-4.1ubuntu2_amd64.deb ... 1868s Unpacking libboost1.83-dev:amd64 (1.83.0-4.1ubuntu2) ... 1869s Selecting previously unselected package libboost-dev:amd64. 1869s Preparing to unpack .../062-libboost-dev_1.83.0.2ubuntu1_amd64.deb ... 1869s Unpacking libboost-dev:amd64 (1.83.0.2ubuntu1) ... 1869s Selecting previously unselected package libbrotli-dev:amd64. 1870s Preparing to unpack .../063-libbrotli-dev_1.1.0-2build4_amd64.deb ... 1870s Unpacking libbrotli-dev:amd64 (1.1.0-2build4) ... 1870s Selecting previously unselected package libbz2-dev:amd64. 1870s Preparing to unpack .../064-libbz2-dev_1.0.8-6_amd64.deb ... 1870s Unpacking libbz2-dev:amd64 (1.0.8-6) ... 1870s Selecting previously unselected package libpixman-1-0:amd64. 1870s Preparing to unpack .../065-libpixman-1-0_0.44.0-3_amd64.deb ... 1870s Unpacking libpixman-1-0:amd64 (0.44.0-3) ... 1870s Selecting previously unselected package libxcb-render0:amd64. 1870s Preparing to unpack .../066-libxcb-render0_1.17.0-2_amd64.deb ... 1870s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 1870s Selecting previously unselected package libxcb-shm0:amd64. 1870s Preparing to unpack .../067-libxcb-shm0_1.17.0-2_amd64.deb ... 1870s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 1870s Selecting previously unselected package libxrender1:amd64. 1870s Preparing to unpack .../068-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 1870s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 1870s Selecting previously unselected package libcairo2:amd64. 1870s Preparing to unpack .../069-libcairo2_1.18.2-2_amd64.deb ... 1870s Unpacking libcairo2:amd64 (1.18.2-2) ... 1870s Selecting previously unselected package libcolamd3:amd64. 1870s Preparing to unpack .../070-libcolamd3_1%3a7.8.3+dfsg-3_amd64.deb ... 1870s Unpacking libcolamd3:amd64 (1:7.8.3+dfsg-3) ... 1870s Selecting previously unselected package libidn2-dev:amd64. 1870s Preparing to unpack .../071-libidn2-dev_2.3.7-2build2_amd64.deb ... 1870s Unpacking libidn2-dev:amd64 (2.3.7-2build2) ... 1870s Selecting previously unselected package libkrb5-dev:amd64. 1870s Preparing to unpack .../072-libkrb5-dev_1.21.3-4ubuntu2_amd64.deb ... 1870s Unpacking libkrb5-dev:amd64 (1.21.3-4ubuntu2) ... 1870s Selecting previously unselected package libldap-dev:amd64. 1870s Preparing to unpack .../073-libldap-dev_2.6.9+dfsg-1~exp2ubuntu1_amd64.deb ... 1870s Unpacking libldap-dev:amd64 (2.6.9+dfsg-1~exp2ubuntu1) ... 1870s Selecting previously unselected package libpkgconf3:amd64. 1870s Preparing to unpack .../074-libpkgconf3_1.8.1-4_amd64.deb ... 1870s Unpacking libpkgconf3:amd64 (1.8.1-4) ... 1870s Selecting previously unselected package pkgconf-bin. 1870s Preparing to unpack .../075-pkgconf-bin_1.8.1-4_amd64.deb ... 1870s Unpacking pkgconf-bin (1.8.1-4) ... 1870s Selecting previously unselected package pkgconf:amd64. 1870s Preparing to unpack .../076-pkgconf_1.8.1-4_amd64.deb ... 1870s Unpacking pkgconf:amd64 (1.8.1-4) ... 1870s Selecting previously unselected package libnghttp2-dev:amd64. 1870s Preparing to unpack .../077-libnghttp2-dev_1.64.0-1_amd64.deb ... 1870s Unpacking libnghttp2-dev:amd64 (1.64.0-1) ... 1870s Selecting previously unselected package libpsl-dev:amd64. 1870s Preparing to unpack .../078-libpsl-dev_0.21.2-1.1build1_amd64.deb ... 1870s Unpacking libpsl-dev:amd64 (0.21.2-1.1build1) ... 1870s Selecting previously unselected package libgmpxx4ldbl:amd64. 1870s Preparing to unpack .../079-libgmpxx4ldbl_2%3a6.3.0+dfsg-3ubuntu1_amd64.deb ... 1870s Unpacking libgmpxx4ldbl:amd64 (2:6.3.0+dfsg-3ubuntu1) ... 1870s Selecting previously unselected package libgmp-dev:amd64. 1870s Preparing to unpack .../080-libgmp-dev_2%3a6.3.0+dfsg-3ubuntu1_amd64.deb ... 1870s Unpacking libgmp-dev:amd64 (2:6.3.0+dfsg-3ubuntu1) ... 1870s Selecting previously unselected package libevent-2.1-7t64:amd64. 1870s Preparing to unpack .../081-libevent-2.1-7t64_2.1.12-stable-10_amd64.deb ... 1870s Unpacking libevent-2.1-7t64:amd64 (2.1.12-stable-10) ... 1870s Selecting previously unselected package libunbound8:amd64. 1870s Preparing to unpack .../082-libunbound8_1.22.0-1ubuntu1_amd64.deb ... 1870s Unpacking libunbound8:amd64 (1.22.0-1ubuntu1) ... 1870s Selecting previously unselected package libgnutls-dane0t64:amd64. 1870s Preparing to unpack .../083-libgnutls-dane0t64_3.8.9-2ubuntu2_amd64.deb ... 1870s Unpacking libgnutls-dane0t64:amd64 (3.8.9-2ubuntu2) ... 1870s Selecting previously unselected package libgnutls-openssl27t64:amd64. 1870s Preparing to unpack .../084-libgnutls-openssl27t64_3.8.9-2ubuntu2_amd64.deb ... 1870s Unpacking libgnutls-openssl27t64:amd64 (3.8.9-2ubuntu2) ... 1870s Selecting previously unselected package libp11-kit-dev:amd64. 1870s Preparing to unpack .../085-libp11-kit-dev_0.25.5-2ubuntu3_amd64.deb ... 1870s Unpacking libp11-kit-dev:amd64 (0.25.5-2ubuntu3) ... 1870s Selecting previously unselected package libtasn1-6-dev:amd64. 1870s Preparing to unpack .../086-libtasn1-6-dev_4.20.0-2_amd64.deb ... 1870s Unpacking libtasn1-6-dev:amd64 (4.20.0-2) ... 1870s Selecting previously unselected package nettle-dev:amd64. 1870s Preparing to unpack .../087-nettle-dev_3.10.1-1_amd64.deb ... 1870s Unpacking nettle-dev:amd64 (3.10.1-1) ... 1870s Selecting previously unselected package libgnutls28-dev:amd64. 1870s Preparing to unpack .../088-libgnutls28-dev_3.8.9-2ubuntu2_amd64.deb ... 1870s Unpacking libgnutls28-dev:amd64 (3.8.9-2ubuntu2) ... 1870s Selecting previously unselected package zlib1g-dev:amd64. 1870s Preparing to unpack .../089-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ... 1870s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 1870s Selecting previously unselected package librtmp-dev:amd64. 1870s Preparing to unpack .../090-librtmp-dev_2.4+20151223.gitfa8646d.1-2build7_amd64.deb ... 1870s Unpacking librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-2build7) ... 1870s Selecting previously unselected package libssl-dev:amd64. 1870s Preparing to unpack .../091-libssl-dev_3.4.1-1ubuntu1_amd64.deb ... 1870s Unpacking libssl-dev:amd64 (3.4.1-1ubuntu1) ... 1870s Selecting previously unselected package libssh2-1-dev:amd64. 1870s Preparing to unpack .../092-libssh2-1-dev_1.11.1-1_amd64.deb ... 1870s Unpacking libssh2-1-dev:amd64 (1.11.1-1) ... 1871s Selecting previously unselected package libzstd-dev:amd64. 1871s Preparing to unpack .../093-libzstd-dev_1.5.6+dfsg-2_amd64.deb ... 1871s Unpacking libzstd-dev:amd64 (1.5.6+dfsg-2) ... 1871s Selecting previously unselected package libcurl4-openssl-dev:amd64. 1871s Preparing to unpack .../094-libcurl4-openssl-dev_8.12.1-3ubuntu1_amd64.deb ... 1871s Unpacking libcurl4-openssl-dev:amd64 (8.12.1-3ubuntu1) ... 1871s Selecting previously unselected package libdatrie1:amd64. 1871s Preparing to unpack .../095-libdatrie1_0.2.13-3build1_amd64.deb ... 1871s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 1871s Selecting previously unselected package libdeflate0:amd64. 1871s Preparing to unpack .../096-libdeflate0_1.23-1_amd64.deb ... 1871s Unpacking libdeflate0:amd64 (1.23-1) ... 1871s Selecting previously unselected package libdeflate-dev:amd64. 1871s Preparing to unpack .../097-libdeflate-dev_1.23-1_amd64.deb ... 1871s Unpacking libdeflate-dev:amd64 (1.23-1) ... 1871s Selecting previously unselected package libltdl7:amd64. 1871s Preparing to unpack .../098-libltdl7_2.5.4-4_amd64.deb ... 1871s Unpacking libltdl7:amd64 (2.5.4-4) ... 1871s Selecting previously unselected package libglpk40:amd64. 1871s Preparing to unpack .../099-libglpk40_5.0-1build2_amd64.deb ... 1871s Unpacking libglpk40:amd64 (5.0-1build2) ... 1871s Selecting previously unselected package libgraphite2-3:amd64. 1871s Preparing to unpack .../100-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 1871s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 1871s Selecting previously unselected package libgslcblas0:amd64. 1871s Preparing to unpack .../101-libgslcblas0_2.8+dfsg-5_amd64.deb ... 1871s Unpacking libgslcblas0:amd64 (2.8+dfsg-5) ... 1871s Selecting previously unselected package libgsl28:amd64. 1871s Preparing to unpack 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previously unselected package libjpeg-turbo8-dev:amd64. 1871s Preparing to unpack .../112-libjpeg-turbo8-dev_2.1.5-3ubuntu2_amd64.deb ... 1871s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-3ubuntu2) ... 1871s Selecting previously unselected package libjpeg8:amd64. 1871s Preparing to unpack .../113-libjpeg8_8c-2ubuntu11_amd64.deb ... 1871s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 1871s Selecting previously unselected package libjpeg8-dev:amd64. 1871s Preparing to unpack .../114-libjpeg8-dev_8c-2ubuntu11_amd64.deb ... 1871s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu11) ... 1871s Selecting previously unselected package libjpeg-dev:amd64. 1871s Preparing to unpack .../115-libjpeg-dev_8c-2ubuntu11_amd64.deb ... 1871s Unpacking libjpeg-dev:amd64 (8c-2ubuntu11) ... 1871s Selecting previously unselected package libaec-dev:amd64. 1871s Preparing to unpack .../116-libaec-dev_1.1.3-1_amd64.deb ... 1871s Unpacking libaec-dev:amd64 (1.1.3-1) ... 1871s Selecting previously unselected package libhdf5-dev. 1871s Preparing to unpack .../117-libhdf5-dev_1.14.5+repack-3_amd64.deb ... 1871s Unpacking libhdf5-dev (1.14.5+repack-3) ... 1871s Selecting previously unselected package libhnswlib-dev. 1871s Preparing to unpack .../118-libhnswlib-dev_0.8.0-1build3_all.deb ... 1871s Unpacking libhnswlib-dev (0.8.0-1build3) ... 1871s Selecting previously unselected package x11-common. 1871s Preparing to unpack .../119-x11-common_1%3a7.7+23ubuntu3_all.deb ... 1871s Unpacking x11-common (1:7.7+23ubuntu3) ... 1871s Selecting previously unselected package libice6:amd64. 1871s Preparing to unpack .../120-libice6_2%3a1.1.1-1_amd64.deb ... 1871s Unpacking libice6:amd64 (2:1.1.1-1) ... 1871s Selecting previously unselected package libicu-dev:amd64. 1871s Preparing to unpack .../121-libicu-dev_76.1-1ubuntu2_amd64.deb ... 1871s Unpacking libicu-dev:amd64 (76.1-1ubuntu2) ... 1872s Selecting previously unselected package libjs-bootstrap. 1872s Preparing to unpack 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previously unselected package libncurses-dev:amd64. 1873s Preparing to unpack .../143-libncurses-dev_6.5+20250216-2_amd64.deb ... 1873s Unpacking libncurses-dev:amd64 (6.5+20250216-2) ... 1873s Selecting previously unselected package libthai-data. 1873s Preparing to unpack .../144-libthai-data_0.1.29-2build1_all.deb ... 1873s Unpacking libthai-data (0.1.29-2build1) ... 1873s Selecting previously unselected package libthai0:amd64. 1873s Preparing to unpack .../145-libthai0_0.1.29-2build1_amd64.deb ... 1873s Unpacking libthai0:amd64 (0.1.29-2build1) ... 1873s Selecting previously unselected package libpango-1.0-0:amd64. 1873s Preparing to unpack .../146-libpango-1.0-0_1.56.2-1_amd64.deb ... 1873s Unpacking libpango-1.0-0:amd64 (1.56.2-1) ... 1873s Selecting previously unselected package libpangoft2-1.0-0:amd64. 1873s Preparing to unpack .../147-libpangoft2-1.0-0_1.56.2-1_amd64.deb ... 1873s Unpacking libpangoft2-1.0-0:amd64 (1.56.2-1) ... 1873s Selecting previously unselected package 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previously unselected package libxaw7:amd64. 1874s Preparing to unpack .../174-libxaw7_2%3a1.0.16-1_amd64.deb ... 1874s Unpacking libxaw7:amd64 (2:1.0.16-1) ... 1874s Selecting previously unselected package libxi6:amd64. 1874s Preparing to unpack .../175-libxi6_2%3a1.8.2-1_amd64.deb ... 1874s Unpacking libxi6:amd64 (2:1.8.2-1) ... 1874s Selecting previously unselected package libzzip-0-13t64:amd64. 1874s Preparing to unpack .../176-libzzip-0-13t64_0.13.78+dfsg.1-0.1_amd64.deb ... 1874s Unpacking libzzip-0-13t64:amd64 (0.13.78+dfsg.1-0.1) ... 1874s Selecting previously unselected package zip. 1874s Preparing to unpack .../177-zip_3.0-14ubuntu2_amd64.deb ... 1874s Unpacking zip (3.0-14ubuntu2) ... 1874s Selecting previously unselected package unzip. 1874s Preparing to unpack .../178-unzip_6.0-28ubuntu6_amd64.deb ... 1874s Unpacking unzip (6.0-28ubuntu6) ... 1874s Selecting previously unselected package xdg-utils. 1874s Preparing to unpack .../179-xdg-utils_1.2.1-2ubuntu1_all.deb ... 1874s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 1874s Selecting previously unselected package r-base-core. 1874s Preparing to unpack .../180-r-base-core_4.4.3-1_amd64.deb ... 1874s Unpacking r-base-core (4.4.3-1) ... 1874s Selecting previously unselected package r-cran-littler. 1874s Preparing to unpack .../181-r-cran-littler_0.3.20-2_amd64.deb ... 1874s Unpacking r-cran-littler (0.3.20-2) ... 1874s Selecting previously unselected package littler. 1874s Preparing to unpack .../182-littler_0.3.20-2_all.deb ... 1874s Unpacking littler (0.3.20-2) ... 1874s Selecting previously unselected package node-bootstrap-sass. 1874s Preparing to unpack .../183-node-bootstrap-sass_3.4.3-2_all.deb ... 1874s Unpacking node-bootstrap-sass (3.4.3-2) ... 1874s Selecting previously unselected package node-html5shiv. 1874s Preparing to unpack .../184-node-html5shiv_3.7.3+dfsg-5_all.deb ... 1874s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 1874s Selecting previously unselected package node-normalize.css. 1874s Preparing to unpack .../185-node-normalize.css_8.0.1-5_all.deb ... 1874s Unpacking node-normalize.css (8.0.1-5) ... 1874s Selecting previously unselected package pandoc-data. 1874s Preparing to unpack .../186-pandoc-data_3.1.11.1-3build1_all.deb ... 1874s Unpacking pandoc-data (3.1.11.1-3build1) ... 1874s Selecting previously unselected package pandoc. 1874s Preparing to unpack .../187-pandoc_3.1.11.1+ds-2_amd64.deb ... 1874s Unpacking pandoc (3.1.11.1+ds-2) ... 1875s Selecting previously unselected package liblzma-dev:amd64. 1875s Preparing to unpack .../188-liblzma-dev_5.6.4-1_amd64.deb ... 1875s Unpacking liblzma-dev:amd64 (5.6.4-1) ... 1875s Selecting previously unselected package libtirpc-dev:amd64. 1875s Preparing to unpack .../189-libtirpc-dev_1.3.4+ds-1.3_amd64.deb ... 1875s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1.3) ... 1875s Selecting previously unselected package r-base-dev. 1875s Preparing to unpack .../190-r-base-dev_4.4.3-1_all.deb ... 1875s Unpacking r-base-dev (4.4.3-1) ... 1875s Selecting previously unselected package pkg-r-autopkgtest. 1875s Preparing to unpack .../191-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 1875s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 1875s Selecting previously unselected package r-bioc-biocgenerics. 1875s Preparing to unpack .../192-r-bioc-biocgenerics_0.52.0-2_all.deb ... 1875s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 1875s Selecting previously unselected package r-bioc-alabaster.schemas. 1875s Preparing to unpack .../193-r-bioc-alabaster.schemas_1.6.0+ds-2_all.deb ... 1875s Unpacking r-bioc-alabaster.schemas (1.6.0+ds-2) ... 1875s Selecting previously unselected package r-bioc-s4vectors. 1875s Preparing to unpack .../194-r-bioc-s4vectors_0.44.0+dfsg-2_amd64.deb ... 1875s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 1875s Selecting previously unselected package r-bioc-rhdf5lib. 1875s Preparing to unpack .../195-r-bioc-rhdf5lib_1.28.0+dfsg-2build1_amd64.deb ... 1875s Unpacking r-bioc-rhdf5lib (1.28.0+dfsg-2build1) ... 1875s Selecting previously unselected package r-bioc-rhdf5filters. 1875s Preparing to unpack .../196-r-bioc-rhdf5filters_1.18.0+dfsg-2_amd64.deb ... 1875s Unpacking r-bioc-rhdf5filters (1.18.0+dfsg-2) ... 1875s Selecting previously unselected package r-bioc-rhdf5. 1875s Preparing to unpack .../197-r-bioc-rhdf5_2.50.2+dfsg-1build1_amd64.deb ... 1875s Unpacking r-bioc-rhdf5 (2.50.2+dfsg-1build1) ... 1875s Selecting previously unselected package r-cran-jsonlite. 1875s Preparing to unpack .../198-r-cran-jsonlite_1.9.1+dfsg-1_amd64.deb ... 1875s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 1876s Selecting previously unselected package r-cran-pkgkitten. 1876s Preparing to unpack .../199-r-cran-pkgkitten_0.2.4-1_all.deb ... 1876s Unpacking r-cran-pkgkitten (0.2.4-1) ... 1876s Selecting previously unselected package r-cran-rcpp. 1876s Preparing to unpack .../200-r-cran-rcpp_1.0.14-1_amd64.deb ... 1876s Unpacking r-cran-rcpp (1.0.14-1) ... 1876s Selecting previously unselected package r-bioc-alabaster.base. 1876s Preparing to unpack .../201-r-bioc-alabaster.base_1.6.1+ds-2build1_amd64.deb ... 1876s Unpacking r-bioc-alabaster.base (1.6.1+ds-2build1) ... 1876s Selecting previously unselected package r-cran-lattice. 1876s Preparing to unpack .../202-r-cran-lattice_0.22-6-1_amd64.deb ... 1876s Unpacking r-cran-lattice (0.22-6-1) ... 1876s Selecting previously unselected package r-cran-matrix. 1876s Preparing to unpack .../203-r-cran-matrix_1.7-3-1_amd64.deb ... 1876s Unpacking r-cran-matrix (1.7-3-1) ... 1876s Selecting previously unselected package r-cran-matrixstats. 1876s Preparing to unpack .../204-r-cran-matrixstats_1.5.0-1_amd64.deb ... 1876s Unpacking r-cran-matrixstats (1.5.0-1) ... 1876s Selecting previously unselected package r-bioc-matrixgenerics. 1876s Preparing to unpack .../205-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 1876s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 1876s Selecting previously unselected package r-bioc-iranges. 1876s Preparing to unpack .../206-r-bioc-iranges_2.40.1-2_amd64.deb ... 1876s Unpacking r-bioc-iranges (2.40.1-2) ... 1876s Selecting previously unselected package r-cran-abind. 1876s Preparing to unpack .../207-r-cran-abind_1.4-8-1_all.deb ... 1876s Unpacking r-cran-abind (1.4-8-1) ... 1876s Selecting previously unselected package r-cran-crayon. 1876s Preparing to unpack .../208-r-cran-crayon_1.5.3-1_all.deb ... 1876s Unpacking r-cran-crayon (1.5.3-1) ... 1876s Selecting previously unselected package r-bioc-s4arrays. 1876s Preparing to unpack .../209-r-bioc-s4arrays_1.6.0+dfsg-2_amd64.deb ... 1876s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 1876s Selecting previously unselected package r-bioc-zlibbioc. 1876s Preparing to unpack .../210-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 1876s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 1876s Selecting previously unselected package r-bioc-xvector. 1876s Preparing to unpack .../211-r-bioc-xvector_0.46.0-2_amd64.deb ... 1876s Unpacking r-bioc-xvector (0.46.0-2) ... 1876s Selecting previously unselected package r-bioc-sparsearray. 1876s Preparing to unpack .../212-r-bioc-sparsearray_1.6.2+dfsg-1_amd64.deb ... 1876s Unpacking r-bioc-sparsearray (1.6.2+dfsg-1) ... 1876s Selecting previously unselected package r-bioc-delayedarray. 1876s Preparing to unpack .../213-r-bioc-delayedarray_0.32.0+dfsg-2_amd64.deb ... 1876s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 1876s Selecting previously unselected package r-bioc-hdf5array. 1876s Preparing to unpack .../214-r-bioc-hdf5array_1.34.0-2build1_amd64.deb ... 1876s Unpacking r-bioc-hdf5array (1.34.0-2build1) ... 1876s Selecting previously unselected package r-bioc-alabaster.matrix. 1876s Preparing to unpack .../215-r-bioc-alabaster.matrix_1.6.1+ds-2_amd64.deb ... 1876s Unpacking r-bioc-alabaster.matrix (1.6.1+ds-2) ... 1876s Selecting previously unselected package r-cran-curl. 1876s Preparing to unpack .../216-r-cran-curl_6.2.1+dfsg-1ubuntu1_amd64.deb ... 1876s Unpacking r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 1876s Selecting previously unselected package r-cran-mime. 1876s Preparing to unpack .../217-r-cran-mime_0.12-2_amd64.deb ... 1876s Unpacking r-cran-mime (0.12-2) ... 1876s Selecting previously unselected package r-cran-sys. 1876s Preparing to unpack .../218-r-cran-sys_3.4.3-1_amd64.deb ... 1876s Unpacking r-cran-sys (3.4.3-1) ... 1876s Selecting previously unselected package r-cran-askpass. 1876s Preparing to unpack .../219-r-cran-askpass_1.2.1-1_amd64.deb ... 1876s Unpacking r-cran-askpass (1.2.1-1) ... 1876s Selecting previously unselected package r-cran-openssl. 1876s Preparing to unpack .../220-r-cran-openssl_2.3.2+dfsg-1_amd64.deb ... 1876s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 1876s Selecting previously unselected package r-cran-r6. 1876s Preparing to unpack .../221-r-cran-r6_2.6.1-1_all.deb ... 1876s Unpacking r-cran-r6 (2.6.1-1) ... 1876s Selecting previously unselected package r-cran-httr. 1876s Preparing to unpack .../222-r-cran-httr_1.4.7+dfsg-1_all.deb ... 1876s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 1877s Selecting previously unselected package r-bioc-ucsc.utils. 1877s Preparing to unpack .../223-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 1877s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 1877s Selecting previously unselected package r-bioc-genomeinfodbdata. 1877s Preparing to unpack .../224-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 1877s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 1877s Selecting previously unselected package r-bioc-genomeinfodb. 1877s Preparing to unpack .../225-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 1877s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 1877s Selecting previously unselected package r-bioc-genomicranges. 1877s Preparing to unpack .../226-r-bioc-genomicranges_1.58.0+dfsg-2_amd64.deb ... 1877s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 1877s Selecting previously unselected package r-bioc-alabaster.ranges. 1877s Preparing to unpack .../227-r-bioc-alabaster.ranges_1.6.0+ds-2_all.deb ... 1877s Unpacking r-bioc-alabaster.ranges (1.6.0+ds-2) ... 1877s Selecting previously unselected package r-bioc-biobase. 1877s Preparing to unpack .../228-r-bioc-biobase_2.66.0-2_amd64.deb ... 1877s Unpacking r-bioc-biobase (2.66.0-2) ... 1877s Selecting previously unselected package r-bioc-summarizedexperiment. 1877s Preparing to unpack .../229-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 1877s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 1877s Selecting previously unselected package r-bioc-singlecellexperiment. 1877s Preparing to unpack .../230-r-bioc-singlecellexperiment_1.28.1+ds-2_all.deb ... 1877s Unpacking r-bioc-singlecellexperiment (1.28.1+ds-2) ... 1877s Selecting previously unselected package r-bioc-alabaster.se. 1877s Preparing to unpack .../231-r-bioc-alabaster.se_1.6.0+ds-2_all.deb ... 1877s Unpacking r-bioc-alabaster.se (1.6.0+ds-2) ... 1877s Selecting previously unselected package r-bioc-alabaster.sce. 1877s Preparing to unpack .../232-r-bioc-alabaster.sce_1.6.0+ds-2_all.deb ... 1877s Unpacking r-bioc-alabaster.sce (1.6.0+ds-2) ... 1877s Selecting previously unselected package r-cran-dbi. 1877s Preparing to unpack .../233-r-cran-dbi_1.2.3-1_all.deb ... 1877s Unpacking r-cran-dbi (1.2.3-1) ... 1877s Selecting previously unselected package r-cran-bit. 1877s Preparing to unpack .../234-r-cran-bit_4.6.0+dfsg-1_amd64.deb ... 1877s Unpacking r-cran-bit (4.6.0+dfsg-1) ... 1877s Selecting previously unselected package r-cran-bit64. 1877s Preparing to unpack .../235-r-cran-bit64_4.6.0-1-1ubuntu2_amd64.deb ... 1877s Unpacking r-cran-bit64 (4.6.0-1-1ubuntu2) ... 1877s Selecting previously unselected package r-cran-rlang. 1877s Preparing to unpack .../236-r-cran-rlang_1.1.5-1_amd64.deb ... 1877s Unpacking r-cran-rlang (1.1.5-1) ... 1877s Selecting previously unselected package r-cran-cli. 1877s Preparing to unpack .../237-r-cran-cli_3.6.4-1_amd64.deb ... 1877s Unpacking r-cran-cli (3.6.4-1) ... 1877s Selecting previously unselected package r-cran-glue. 1877s Preparing to unpack .../238-r-cran-glue_1.8.0-1_amd64.deb ... 1877s Unpacking r-cran-glue (1.8.0-1) ... 1877s Selecting previously unselected package r-cran-lifecycle. 1877s Preparing to unpack .../239-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 1877s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 1877s Selecting previously unselected package r-cran-vctrs. 1877s Preparing to unpack .../240-r-cran-vctrs_0.6.5-1_amd64.deb ... 1877s Unpacking r-cran-vctrs (0.6.5-1) ... 1877s Selecting previously unselected package r-cran-blob. 1877s Preparing to unpack .../241-r-cran-blob_1.2.4-1_all.deb ... 1877s Unpacking r-cran-blob (1.2.4-1) ... 1877s Selecting previously unselected package r-cran-fastmap. 1877s Preparing to unpack .../242-r-cran-fastmap_1.2.0-1_amd64.deb ... 1877s Unpacking r-cran-fastmap (1.2.0-1) ... 1877s Selecting previously unselected package r-cran-cachem. 1877s Preparing to unpack .../243-r-cran-cachem_1.1.0-1_amd64.deb ... 1877s Unpacking r-cran-cachem (1.1.0-1) ... 1877s Selecting previously unselected package r-cran-memoise. 1877s Preparing to unpack .../244-r-cran-memoise_2.0.1-1_all.deb ... 1877s Unpacking r-cran-memoise (2.0.1-1) ... 1877s Selecting previously unselected package r-cran-pkgconfig. 1877s Preparing to unpack .../245-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 1877s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 1877s Selecting previously unselected package r-cran-plogr. 1877s Preparing to unpack .../246-r-cran-plogr_0.2.0-3build1_all.deb ... 1877s Unpacking r-cran-plogr (0.2.0-3build1) ... 1877s Selecting previously unselected package r-cran-cpp11. 1877s Preparing to unpack .../247-r-cran-cpp11_0.5.2-1_all.deb ... 1877s Unpacking r-cran-cpp11 (0.5.2-1) ... 1878s Selecting previously unselected package r-cran-rsqlite. 1878s Preparing to unpack .../248-r-cran-rsqlite_2.3.9-1_amd64.deb ... 1878s Unpacking r-cran-rsqlite (2.3.9-1) ... 1878s Selecting previously unselected package r-cran-png. 1878s Preparing to unpack .../249-r-cran-png_0.1-8-1build2_amd64.deb ... 1878s Unpacking r-cran-png (0.1-8-1build2) ... 1878s Selecting previously unselected package r-bioc-biostrings. 1878s Preparing to unpack .../250-r-bioc-biostrings_2.74.1+dfsg-2_amd64.deb ... 1878s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 1878s Selecting previously unselected package r-bioc-keggrest. 1878s Preparing to unpack .../251-r-bioc-keggrest_1.46.0+dfsg-2_all.deb ... 1878s Unpacking r-bioc-keggrest (1.46.0+dfsg-2) ... 1878s Selecting previously unselected package r-bioc-annotationdbi. 1878s Preparing to unpack .../252-r-bioc-annotationdbi_1.68.0-2_all.deb ... 1878s Unpacking r-bioc-annotationdbi (1.68.0-2) ... 1878s Selecting previously unselected package r-cran-lazyeval. 1878s Preparing to unpack .../253-r-cran-lazyeval_0.2.2-1build1_amd64.deb ... 1878s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 1878s Selecting previously unselected package r-bioc-annotationfilter. 1878s Preparing to unpack .../254-r-bioc-annotationfilter_1.30.0+dfsg-2_all.deb ... 1878s Unpacking r-bioc-annotationfilter (1.30.0+dfsg-2) ... 1878s Selecting previously unselected package r-cran-generics. 1878s Preparing to unpack .../255-r-cran-generics_0.1.3-1_all.deb ... 1878s Unpacking r-cran-generics (0.1.3-1) ... 1878s Selecting previously unselected package r-cran-magrittr. 1878s Preparing to unpack .../256-r-cran-magrittr_2.0.3-1_amd64.deb ... 1878s Unpacking r-cran-magrittr (2.0.3-1) ... 1878s Selecting previously unselected package r-cran-utf8. 1878s Preparing to unpack .../257-r-cran-utf8_1.2.4-1_amd64.deb ... 1878s Unpacking r-cran-utf8 (1.2.4-1) ... 1878s Selecting previously unselected package r-cran-pillar. 1878s Preparing to unpack .../258-r-cran-pillar_1.10.1+dfsg-1_all.deb ... 1878s Unpacking r-cran-pillar (1.10.1+dfsg-1) ... 1878s Selecting previously unselected package r-cran-fansi. 1878s Preparing to unpack .../259-r-cran-fansi_1.0.5-1_amd64.deb ... 1878s Unpacking r-cran-fansi (1.0.5-1) ... 1878s Selecting previously unselected package r-cran-tibble. 1878s Preparing to unpack .../260-r-cran-tibble_3.2.1+dfsg-3_amd64.deb ... 1878s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 1878s Selecting previously unselected package r-cran-withr. 1878s Preparing to unpack .../261-r-cran-withr_3.0.2+dfsg-1_all.deb ... 1878s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 1878s Selecting previously unselected package r-cran-tidyselect. 1878s Preparing to unpack .../262-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ... 1878s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 1878s Selecting previously unselected package r-cran-dplyr. 1878s Preparing to unpack .../263-r-cran-dplyr_1.1.4-4_amd64.deb ... 1878s Unpacking r-cran-dplyr (1.1.4-4) ... 1878s Selecting previously unselected package r-cran-purrr. 1878s Preparing to unpack .../264-r-cran-purrr_1.0.4-1_amd64.deb ... 1878s Unpacking r-cran-purrr (1.0.4-1) ... 1878s Selecting previously unselected package r-cran-stringi. 1878s Preparing to unpack .../265-r-cran-stringi_1.8.4-1build1_amd64.deb ... 1878s Unpacking r-cran-stringi (1.8.4-1build1) ... 1878s Selecting previously unselected package r-cran-stringr. 1878s Preparing to unpack .../266-r-cran-stringr_1.5.1-1_all.deb ... 1878s Unpacking r-cran-stringr (1.5.1-1) ... 1878s Selecting previously unselected package r-cran-tidyr. 1878s Preparing to unpack .../267-r-cran-tidyr_1.3.1-1_amd64.deb ... 1878s Unpacking r-cran-tidyr (1.3.1-1) ... 1878s Selecting previously unselected package r-cran-dbplyr. 1878s Preparing to unpack .../268-r-cran-dbplyr_2.5.0+dfsg-1_all.deb ... 1878s Unpacking r-cran-dbplyr (2.5.0+dfsg-1) ... 1879s Selecting previously unselected package r-cran-filelock. 1879s Preparing to unpack .../269-r-cran-filelock_1.0.3-1_amd64.deb ... 1879s Unpacking r-cran-filelock (1.0.3-1) ... 1879s Selecting previously unselected package r-bioc-biocfilecache. 1879s Preparing to unpack .../270-r-bioc-biocfilecache_2.14.0+dfsg-2_all.deb ... 1879s Unpacking r-bioc-biocfilecache (2.14.0+dfsg-2) ... 1879s Selecting previously unselected package r-cran-biocmanager. 1879s Preparing to unpack .../271-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 1879s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 1879s Selecting previously unselected package r-bioc-biocversion. 1879s Preparing to unpack .../272-r-bioc-biocversion_3.20.0-2_all.deb ... 1879s Unpacking r-bioc-biocversion (3.20.0-2) ... 1879s Selecting previously unselected package r-cran-rappdirs. 1879s Preparing to unpack .../273-r-cran-rappdirs_0.3.3-1_amd64.deb ... 1879s Unpacking r-cran-rappdirs (0.3.3-1) ... 1879s Selecting previously unselected package r-cran-yaml. 1879s Preparing to unpack .../274-r-cran-yaml_2.3.10-1_amd64.deb ... 1879s Unpacking r-cran-yaml (2.3.10-1) ... 1879s Selecting previously unselected package r-bioc-annotationhub. 1879s Preparing to unpack .../275-r-bioc-annotationhub_3.14.0+dfsg-2_all.deb ... 1879s Unpacking r-bioc-annotationhub (3.14.0+dfsg-2) ... 1879s Selecting previously unselected package r-bioc-assorthead. 1879s Preparing to unpack .../276-r-bioc-assorthead_1.0.1+ds-2_all.deb ... 1879s Unpacking r-bioc-assorthead (1.0.1+ds-2) ... 1879s Selecting previously unselected package r-bioc-beachmat. 1879s Preparing to unpack .../277-r-bioc-beachmat_2.22.0+ds-2_amd64.deb ... 1879s Unpacking r-bioc-beachmat (2.22.0+ds-2) ... 1879s Selecting previously unselected package r-bioc-biocio. 1879s Preparing to unpack .../278-r-bioc-biocio_1.16.0+dfsg-2_all.deb ... 1879s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ... 1879s Selecting previously unselected package r-bioc-biocneighbors. 1879s Preparing to unpack .../279-r-bioc-biocneighbors_2.0.1+ds-2_amd64.deb ... 1879s Unpacking r-bioc-biocneighbors (2.0.1+ds-2) ... 1879s Selecting previously unselected package r-cran-formatr. 1879s Preparing to unpack .../280-r-cran-formatr_1.14-2_all.deb ... 1879s Unpacking r-cran-formatr (1.14-2) ... 1879s Selecting previously unselected package r-cran-lambda.r. 1879s Preparing to unpack .../281-r-cran-lambda.r_1.2.4-2build1_all.deb ... 1879s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 1879s Selecting previously unselected package r-cran-futile.options. 1879s Preparing to unpack .../282-r-cran-futile.options_1.0.1-3build1_all.deb ... 1879s Unpacking r-cran-futile.options (1.0.1-3build1) ... 1879s Selecting previously unselected package r-cran-futile.logger. 1879s Preparing to unpack .../283-r-cran-futile.logger_1.4.3-4build1_all.deb ... 1879s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 1879s Selecting previously unselected package r-cran-snow. 1879s Preparing to unpack .../284-r-cran-snow_1%3a0.4.4-2_all.deb ... 1879s Unpacking r-cran-snow (1:0.4.4-2) ... 1879s Selecting previously unselected package r-cran-codetools. 1879s Preparing to unpack .../285-r-cran-codetools_0.2-20-1_all.deb ... 1879s Unpacking r-cran-codetools (0.2-20-1) ... 1879s Selecting previously unselected package r-cran-bh. 1879s Preparing to unpack .../286-r-cran-bh_1.84.0-1_all.deb ... 1879s Unpacking r-cran-bh (1.84.0-1) ... 1879s Selecting previously unselected package r-bioc-biocparallel. 1879s Preparing to unpack .../287-r-bioc-biocparallel_1.40.0-2_amd64.deb ... 1879s Unpacking r-bioc-biocparallel (1.40.0-2) ... 1879s Selecting previously unselected package r-bioc-scaledmatrix. 1879s Preparing to unpack .../288-r-bioc-scaledmatrix_1.14.0+dfsg-2_all.deb ... 1879s Unpacking r-bioc-scaledmatrix (1.14.0+dfsg-2) ... 1879s Selecting previously unselected package r-cran-irlba. 1879s Preparing to unpack .../289-r-cran-irlba_2.3.5.1-4_amd64.deb ... 1879s Unpacking r-cran-irlba (2.3.5.1-4) ... 1879s Selecting previously unselected package r-cran-rsvd. 1879s Preparing to unpack .../290-r-cran-rsvd_1.0.5-1_all.deb ... 1879s Unpacking r-cran-rsvd (1.0.5-1) ... 1879s Selecting previously unselected package r-bioc-biocsingular. 1879s Preparing to unpack .../291-r-bioc-biocsingular_1.22.0+ds-2_amd64.deb ... 1879s Unpacking r-bioc-biocsingular (1.22.0+ds-2) ... 1879s Selecting previously unselected package r-cran-base64enc. 1879s Preparing to unpack .../292-r-cran-base64enc_0.1-3-3_amd64.deb ... 1879s Unpacking r-cran-base64enc (0.1-3-3) ... 1879s Selecting previously unselected package r-cran-digest. 1879s Preparing to unpack .../293-r-cran-digest_0.6.37-1_amd64.deb ... 1879s Unpacking r-cran-digest (0.6.37-1) ... 1880s Selecting previously unselected package r-cran-htmltools. 1880s Preparing to unpack .../294-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 1880s Unpacking r-cran-htmltools (0.5.8.1-1) ... 1880s Selecting previously unselected package r-cran-evaluate. 1880s Preparing to unpack .../295-r-cran-evaluate_1.0.3-1_all.deb ... 1880s Unpacking r-cran-evaluate (1.0.3-1) ... 1880s Selecting previously unselected package r-cran-xfun. 1880s Preparing to unpack .../296-r-cran-xfun_0.51+dfsg-1_amd64.deb ... 1880s Unpacking r-cran-xfun (0.51+dfsg-1) ... 1880s Selecting previously unselected package r-cran-highr. 1880s Preparing to unpack .../297-r-cran-highr_0.11+dfsg-1_all.deb ... 1880s Unpacking r-cran-highr (0.11+dfsg-1) ... 1880s Selecting previously unselected package libjs-mathjax. 1880s Preparing to unpack .../298-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 1880s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 1880s Selecting previously unselected package r-cran-knitr. 1880s Preparing to unpack .../299-r-cran-knitr_1.49+dfsg-1_all.deb ... 1880s Unpacking r-cran-knitr (1.49+dfsg-1) ... 1880s Selecting previously unselected package r-cran-jquerylib. 1880s Preparing to unpack .../300-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 1880s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 1880s Selecting previously unselected package r-cran-fs. 1880s Preparing to unpack .../301-r-cran-fs_1.6.5+dfsg-1_amd64.deb ... 1880s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 1880s Selecting previously unselected package r-cran-sass. 1880s Preparing to unpack .../302-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 1880s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 1880s Selecting previously unselected package r-cran-bslib. 1880s Preparing to unpack .../303-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 1880s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 1881s Selecting previously unselected package r-cran-fontawesome. 1881s Preparing to unpack .../304-r-cran-fontawesome_0.5.3-1_all.deb ... 1881s Unpacking r-cran-fontawesome (0.5.3-1) ... 1881s Selecting previously unselected package r-cran-tinytex. 1881s Preparing to unpack .../305-r-cran-tinytex_0.56-1_all.deb ... 1881s Unpacking r-cran-tinytex (0.56-1) ... 1881s Selecting previously unselected package libjs-modernizr. 1881s Preparing to unpack .../306-libjs-modernizr_3.13.0-0.1_all.deb ... 1881s Unpacking libjs-modernizr (3.13.0-0.1) ... 1881s Selecting previously unselected package r-cran-later. 1881s Preparing to unpack .../307-r-cran-later_1.4.1+dfsg-1_amd64.deb ... 1881s Unpacking r-cran-later (1.4.1+dfsg-1) ... 1881s Selecting previously unselected package r-cran-promises. 1881s Preparing to unpack .../308-r-cran-promises_1.3.2+dfsg-1_amd64.deb ... 1881s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 1881s Selecting previously unselected package r-cran-httpuv. 1881s Preparing to unpack .../309-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 1881s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 1881s Selecting previously unselected package r-cran-xtable. 1881s Preparing to unpack .../310-r-cran-xtable_1%3a1.8-4-2_all.deb ... 1881s Unpacking r-cran-xtable (1:1.8-4-2) ... 1881s Selecting previously unselected package r-cran-sourcetools. 1881s Preparing to unpack .../311-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 1881s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 1881s Selecting previously unselected package r-cran-commonmark. 1881s Preparing to unpack .../312-r-cran-commonmark_1.9.2-2_amd64.deb ... 1881s Unpacking r-cran-commonmark (1.9.2-2) ... 1881s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 1881s Preparing to unpack .../313-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 1881s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 1881s Selecting previously unselected package r-cran-shiny. 1881s Preparing to unpack .../314-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 1881s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 1881s Selecting previously unselected package r-cran-rmarkdown. 1881s Preparing to unpack .../315-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 1881s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 1881s Selecting previously unselected package r-cran-bookdown. 1881s Preparing to unpack .../316-r-cran-bookdown_0.42+dfsg-1_all.deb ... 1881s Unpacking r-cran-bookdown (0.42+dfsg-1) ... 1881s Selecting previously unselected package tex-common. 1881s Preparing to unpack .../317-tex-common_6.19_all.deb ... 1881s Unpacking tex-common (6.19) ... 1881s Selecting previously unselected package t1utils. 1881s Preparing to unpack .../318-t1utils_1.41-4build3_amd64.deb ... 1881s Unpacking t1utils (1.41-4build3) ... 1881s Selecting previously unselected package texlive-binaries. 1882s Preparing to unpack .../319-texlive-binaries_2024.20240313.70630+ds-5build2_amd64.deb ... 1882s Unpacking texlive-binaries (2024.20240313.70630+ds-5build2) ... 1882s Selecting previously unselected package texlive-base. 1882s Preparing to unpack .../320-texlive-base_2024.20250114-1_all.deb ... 1882s Unpacking texlive-base (2024.20250114-1) ... 1883s Selecting previously unselected package texlive-latex-base. 1883s Preparing to unpack .../321-texlive-latex-base_2024.20250114-1_all.deb ... 1883s Unpacking texlive-latex-base (2024.20250114-1) ... 1883s Selecting previously unselected package texlive-bibtex-extra. 1883s Preparing to unpack .../322-texlive-bibtex-extra_2024.20250114-1_all.deb ... 1883s Unpacking texlive-bibtex-extra (2024.20250114-1) ... 1884s Selecting previously unselected package r-bioc-biocstyle. 1884s Preparing to unpack .../323-r-bioc-biocstyle_2.34.0+dfsg-1_all.deb ... 1884s Unpacking r-bioc-biocstyle (2.34.0+dfsg-1) ... 1884s Selecting previously unselected package r-cran-cluster. 1884s Preparing to unpack .../324-r-cran-cluster_2.1.8-1_amd64.deb ... 1884s Unpacking r-cran-cluster (2.1.8-1) ... 1884s Selecting previously unselected package r-cran-igraph. 1885s Preparing to unpack .../325-r-cran-igraph_2.1.4-1_amd64.deb ... 1885s Unpacking r-cran-igraph (2.1.4-1) ... 1885s Selecting previously unselected package r-bioc-bluster. 1885s Preparing to unpack .../326-r-bioc-bluster_1.16.0+dfsg-2_amd64.deb ... 1885s Unpacking r-bioc-bluster (1.16.0+dfsg-2) ... 1885s Selecting previously unselected package r-bioc-dirichletmultinomial. 1885s Preparing to unpack .../327-r-bioc-dirichletmultinomial_1.48.0-2_amd64.deb ... 1885s Unpacking r-bioc-dirichletmultinomial (1.48.0-2) ... 1885s Selecting previously unselected package r-cran-statmod. 1885s Preparing to unpack .../328-r-cran-statmod_1.5.0-1_amd64.deb ... 1885s Unpacking r-cran-statmod (1.5.0-1) ... 1885s Selecting previously unselected package r-bioc-limma. 1885s Preparing to unpack .../329-r-bioc-limma_3.62.2+dfsg-1_amd64.deb ... 1885s Unpacking r-bioc-limma (3.62.2+dfsg-1) ... 1885s Selecting previously unselected package r-cran-locfit. 1885s Preparing to unpack .../330-r-cran-locfit_1.5-9.12-1_amd64.deb ... 1885s Unpacking r-cran-locfit (1.5-9.12-1) ... 1885s Selecting previously unselected package r-bioc-edger. 1885s Preparing to unpack .../331-r-bioc-edger_4.4.2+dfsg-1_amd64.deb ... 1885s Unpacking r-bioc-edger (4.4.2+dfsg-1) ... 1885s Selecting previously unselected package r-cran-xml. 1885s Preparing to unpack .../332-r-cran-xml_3.99-0.18-1_amd64.deb ... 1885s Unpacking r-cran-xml (3.99-0.18-1) ... 1885s Selecting previously unselected package r-cran-bitops. 1885s Preparing to unpack .../333-r-cran-bitops_1.0-9-1_amd64.deb ... 1885s Unpacking r-cran-bitops (1.0-9-1) ... 1885s Selecting previously unselected package r-bioc-rhtslib. 1885s Preparing to unpack .../334-r-bioc-rhtslib_3.2.0+dfsg-2_amd64.deb ... 1885s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 1885s Selecting previously unselected package r-bioc-rsamtools. 1885s Preparing to unpack .../335-r-bioc-rsamtools_2.22.0+dfsg-2_amd64.deb ... 1885s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 1885s Selecting previously unselected package r-bioc-genomicalignments. 1885s Preparing to unpack .../336-r-bioc-genomicalignments_1.42.0-2_amd64.deb ... 1885s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 1885s Selecting previously unselected package r-cran-rcurl. 1885s Preparing to unpack .../337-r-cran-rcurl_1.98-1.16+dfsg-1_amd64.deb ... 1885s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 1885s Selecting previously unselected package r-cran-rjson. 1885s Preparing to unpack .../338-r-cran-rjson_0.2.23-1_amd64.deb ... 1885s Unpacking r-cran-rjson (0.2.23-1) ... 1885s Selecting previously unselected package r-cran-restfulr. 1885s Preparing to unpack .../339-r-cran-restfulr_0.0.15-1_amd64.deb ... 1885s Unpacking r-cran-restfulr (0.0.15-1) ... 1885s Selecting previously unselected package r-bioc-rtracklayer. 1885s Preparing to unpack .../340-r-bioc-rtracklayer_1.66.0-2_amd64.deb ... 1885s Unpacking r-bioc-rtracklayer (1.66.0-2) ... 1885s Selecting previously unselected package r-bioc-genomicfeatures. 1885s Preparing to unpack .../341-r-bioc-genomicfeatures_1.58.0+dfsg-2_all.deb ... 1885s Unpacking r-bioc-genomicfeatures (1.58.0+dfsg-2) ... 1885s Selecting previously unselected package r-bioc-protgenerics. 1885s Preparing to unpack .../342-r-bioc-protgenerics_1.38.0-2_all.deb ... 1885s Unpacking r-bioc-protgenerics (1.38.0-2) ... 1885s Selecting previously unselected package r-bioc-ensembldb. 1885s Preparing to unpack .../343-r-bioc-ensembldb_2.30.0+dfsg-3_all.deb ... 1885s Unpacking r-bioc-ensembldb (2.30.0+dfsg-3) ... 1885s Selecting previously unselected package r-bioc-experimenthub. 1885s Preparing to unpack .../344-r-bioc-experimenthub_2.14.0+ds-2_all.deb ... 1885s Unpacking r-bioc-experimenthub (2.14.0+ds-2) ... 1886s Selecting previously unselected package r-cran-httr2. 1886s Preparing to unpack .../345-r-cran-httr2_1.1.1-1_all.deb ... 1886s Unpacking r-cran-httr2 (1.1.1-1) ... 1886s Selecting previously unselected package r-bioc-gypsum. 1886s Preparing to unpack .../346-r-bioc-gypsum_1.2.0+ds-2_all.deb ... 1886s Unpacking r-bioc-gypsum (1.2.0+ds-2) ... 1886s Selecting previously unselected package r-bioc-metapod. 1886s Preparing to unpack .../347-r-bioc-metapod_1.14.0+dfsg-2_amd64.deb ... 1886s Unpacking r-bioc-metapod (1.14.0+dfsg-2) ... 1886s Selecting previously unselected package r-bioc-scuttle. 1886s Preparing to unpack .../348-r-bioc-scuttle_1.16.0+dfsg-3_amd64.deb ... 1886s Unpacking r-bioc-scuttle (1.16.0+dfsg-3) ... 1886s Selecting previously unselected package r-cran-gtable. 1886s Preparing to unpack .../349-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 1886s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 1886s Selecting previously unselected package r-cran-isoband. 1886s Preparing to unpack .../350-r-cran-isoband_0.2.7-1_amd64.deb ... 1886s Unpacking r-cran-isoband (0.2.7-1) ... 1886s Selecting previously unselected package r-cran-mass. 1886s Preparing to unpack .../351-r-cran-mass_7.3-64-1_amd64.deb ... 1886s Unpacking r-cran-mass (7.3-64-1) ... 1886s Selecting previously unselected package r-cran-nlme. 1886s Preparing to unpack .../352-r-cran-nlme_3.1.167-1_amd64.deb ... 1886s Unpacking r-cran-nlme (3.1.167-1) ... 1886s Selecting previously unselected package r-cran-mgcv. 1886s Preparing to unpack .../353-r-cran-mgcv_1.9-1-1_amd64.deb ... 1886s Unpacking r-cran-mgcv (1.9-1-1) ... 1886s Selecting previously unselected package r-cran-farver. 1886s Preparing to unpack .../354-r-cran-farver_2.1.2-1_amd64.deb ... 1886s Unpacking r-cran-farver (2.1.2-1) ... 1886s Selecting previously unselected package r-cran-labeling. 1886s Preparing to unpack .../355-r-cran-labeling_0.4.3-1_all.deb ... 1886s Unpacking r-cran-labeling (0.4.3-1) ... 1886s Selecting previously unselected package r-cran-colorspace. 1886s Preparing to unpack .../356-r-cran-colorspace_2.1-1+dfsg-1_amd64.deb ... 1886s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 1886s Selecting previously unselected package r-cran-munsell. 1886s Preparing to unpack .../357-r-cran-munsell_0.5.1-1_all.deb ... 1886s Unpacking r-cran-munsell (0.5.1-1) ... 1886s Selecting previously unselected package r-cran-rcolorbrewer. 1886s Preparing to unpack .../358-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 1886s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 1886s Selecting previously unselected package r-cran-viridislite. 1886s Preparing to unpack .../359-r-cran-viridislite_0.4.2-2_all.deb ... 1886s Unpacking r-cran-viridislite (0.4.2-2) ... 1886s Selecting previously unselected package r-cran-scales. 1886s Preparing to unpack .../360-r-cran-scales_1.3.0-1_all.deb ... 1886s Unpacking r-cran-scales (1.3.0-1) ... 1886s Selecting previously unselected package r-cran-ggplot2. 1886s Preparing to unpack .../361-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 1886s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 1886s Selecting previously unselected package r-cran-beeswarm. 1886s Preparing to unpack .../362-r-cran-beeswarm_0.4.0-1_amd64.deb ... 1886s Unpacking r-cran-beeswarm (0.4.0-1) ... 1886s Selecting previously unselected package r-cran-vipor. 1886s Preparing to unpack .../363-r-cran-vipor_0.4.7-1_all.deb ... 1886s Unpacking r-cran-vipor (0.4.7-1) ... 1886s Selecting previously unselected package r-cran-ggbeeswarm. 1886s Preparing to unpack .../364-r-cran-ggbeeswarm_0.7.2-1_all.deb ... 1886s Unpacking r-cran-ggbeeswarm (0.7.2-1) ... 1886s Selecting previously unselected package r-cran-gridextra. 1886s Preparing to unpack .../365-r-cran-gridextra_2.3-3build1_all.deb ... 1886s Unpacking r-cran-gridextra (2.3-3build1) ... 1887s Selecting previously unselected package r-cran-viridis. 1887s Preparing to unpack .../366-r-cran-viridis_0.6.5-1_all.deb ... 1887s Unpacking r-cran-viridis (0.6.5-1) ... 1887s Selecting previously unselected package r-cran-rtsne. 1887s Preparing to unpack .../367-r-cran-rtsne_0.17-1_amd64.deb ... 1887s Unpacking r-cran-rtsne (0.17-1) ... 1887s Selecting previously unselected package r-cran-rcppeigen. 1887s Preparing to unpack .../368-r-cran-rcppeigen_0.3.4.0.2-1_amd64.deb ... 1887s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 1887s Selecting previously unselected package r-cran-rcppml. 1887s Preparing to unpack .../369-r-cran-rcppml_0.3.7-2_amd64.deb ... 1887s Unpacking r-cran-rcppml (0.3.7-2) ... 1887s Selecting previously unselected package r-cran-fnn. 1887s Preparing to unpack .../370-r-cran-fnn_1.1.4.1-1_amd64.deb ... 1887s Unpacking r-cran-fnn (1.1.4.1-1) ... 1887s Selecting previously unselected package r-cran-rcppannoy. 1887s Preparing to unpack .../371-r-cran-rcppannoy_0.0.22-1_amd64.deb ... 1887s Unpacking r-cran-rcppannoy (0.0.22-1) ... 1887s Selecting previously unselected package r-cran-rspectra. 1887s Preparing to unpack .../372-r-cran-rspectra_0.16-2-1_amd64.deb ... 1887s Unpacking r-cran-rspectra (0.16-2-1) ... 1887s Selecting previously unselected package r-cran-sitmo. 1887s Preparing to unpack .../373-r-cran-sitmo_2.0.2-1_amd64.deb ... 1887s Unpacking r-cran-sitmo (2.0.2-1) ... 1887s Selecting previously unselected package r-cran-dqrng. 1887s Preparing to unpack .../374-r-cran-dqrng_0.3.2+dfsg-1_amd64.deb ... 1887s Unpacking r-cran-dqrng (0.3.2+dfsg-1) ... 1887s Selecting previously unselected package r-cran-rcppprogress. 1887s Preparing to unpack .../375-r-cran-rcppprogress_0.4.2-2build1_all.deb ... 1887s Unpacking r-cran-rcppprogress (0.4.2-2build1) ... 1887s Selecting previously unselected package r-cran-uwot. 1887s Preparing to unpack .../376-r-cran-uwot_0.2.3-1_amd64.deb ... 1887s Unpacking r-cran-uwot (0.2.3-1) ... 1887s Selecting previously unselected package r-cran-pheatmap. 1887s Preparing to unpack .../377-r-cran-pheatmap_1.0.12-2build1_all.deb ... 1887s Unpacking r-cran-pheatmap (1.0.12-2build1) ... 1887s Selecting previously unselected package r-cran-ggrepel. 1887s Preparing to unpack .../378-r-cran-ggrepel_0.9.6-1_amd64.deb ... 1887s Unpacking r-cran-ggrepel (0.9.6-1) ... 1887s Selecting previously unselected package r-cran-cairo. 1887s Preparing to unpack .../379-r-cran-cairo_1.6-2-1_amd64.deb ... 1887s Unpacking r-cran-cairo (1.6-2-1) ... 1887s Selecting previously unselected package r-cran-systemfonts. 1887s Preparing to unpack .../380-r-cran-systemfonts_1.2.1-1_amd64.deb ... 1887s Unpacking r-cran-systemfonts (1.2.1-1) ... 1887s Selecting previously unselected package r-cran-textshaping. 1887s Preparing to unpack .../381-r-cran-textshaping_0.3.7-2_amd64.deb ... 1887s Unpacking r-cran-textshaping (0.3.7-2) ... 1887s Selecting previously unselected package r-cran-ragg. 1887s Preparing to unpack .../382-r-cran-ragg_1.3.3-1_amd64.deb ... 1887s Unpacking r-cran-ragg (1.3.3-1) ... 1887s Selecting previously unselected package r-cran-ggrastr. 1887s Preparing to unpack .../383-r-cran-ggrastr_1.0.2-1_all.deb ... 1887s Unpacking r-cran-ggrastr (1.0.2-1) ... 1887s Selecting previously unselected package r-bioc-scater. 1887s Preparing to unpack .../384-r-bioc-scater_1.34.1+ds-1_all.deb ... 1887s Unpacking r-bioc-scater (1.34.1+ds-1) ... 1887s Selecting previously unselected package r-bioc-scran. 1887s Preparing to unpack .../385-r-bioc-scran_1.34.0+dfsg-3_amd64.deb ... 1887s Unpacking r-bioc-scran (1.34.0+dfsg-3) ... 1887s Selecting previously unselected package r-bioc-scrnaseq. 1888s Preparing to unpack .../386-r-bioc-scrnaseq_2.20.0+ds-2_all.deb ... 1888s Unpacking r-bioc-scrnaseq (2.20.0+ds-2) ... 1888s Selecting previously unselected package r-cran-apcluster. 1888s Preparing to unpack .../387-r-cran-apcluster_1.4.13-1_amd64.deb ... 1888s Unpacking r-cran-apcluster (1.4.13-1) ... 1888s Selecting previously unselected 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This may take some time... done. 1896s Running mktexlsr /var/lib/texmf ... done. 1896s Building format(s) --all. 1919s This may take some time... done. 1920s autopkgtest [15:12:19]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 1920s autopkgtest [15:12:19]: test pkg-r-autopkgtest: [----------------------- 1920s Test: Try to load the R library bluster 1920s 1920s R version 4.4.3 (2025-02-28) -- "Trophy Case" 1920s Copyright (C) 2025 The R Foundation for Statistical Computing 1920s Platform: x86_64-pc-linux-gnu 1920s 1920s R is free software and comes with ABSOLUTELY NO WARRANTY. 1920s You are welcome to redistribute it under certain conditions. 1920s Type 'license()' or 'licence()' for distribution details. 1920s 1920s R is a collaborative project with many contributors. 1920s Type 'contributors()' for more information and 1920s 'citation()' on how to cite R or R packages in publications. 1920s 1920s Type 'demo()' for some demos, 'help()' for on-line help, or 1920s 'help.start()' for an HTML browser interface to help. 1920s Type 'q()' to quit R. 1920s 1920s > library('bluster') 1922s > 1922s > 1922s Other tests are currently unsupported! 1922s They will be progressively added. 1922s autopkgtest [15:12:21]: test pkg-r-autopkgtest: -----------------------] 1923s autopkgtest [15:12:22]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 1923s pkg-r-autopkgtest PASS 1923s autopkgtest [15:12:22]: @@@@@@@@@@@@@@@@@@@@ summary 1923s pkg-r-autopkgtest PASS 1929s nova [W] Skipping flock for amd64 1929s Creating nova instance adt-plucky-amd64-r-bioc-bluster-20250315-144019-juju-7f2275-prod-proposed-migration-environment-2-9cc8a9ec-dc8e-4105-9547-5c88ec0914a2 from image adt/ubuntu-plucky-amd64-server-20250304.img (UUID 9c7d4da5-d95f-4c85-ac1f-51eb37e75c4c)... 1929s nova [W] Timed out waiting for 8d2722a0-a94f-4cdc-b6b0-d70896e411d0 to get deleted.