0s autopkgtest [21:43:31]: starting date and time: 2024-11-14 21:43:31+0000 0s autopkgtest [21:43:31]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [21:43:31]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ohj0gxyd/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade python-weblogo --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-1.secgroup --name adt-plucky-amd64-python-weblogo-20241114-214331-juju-7f2275-prod-proposed-migration-environment-20-8eebd01e-1244-4c6f-bb42-9899b588e7d3 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 42s autopkgtest [21:44:13]: testbed dpkg architecture: amd64 42s autopkgtest [21:44:13]: testbed apt version: 2.9.8 42s autopkgtest [21:44:13]: @@@@@@@@@@@@@@@@@@@@ test bed setup 43s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 43s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [16.1 kB] 43s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 43s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [1037 kB] 43s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [106 kB] 43s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [144 kB] 43s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [79.0 kB] 43s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [32.6 kB] 43s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [807 kB] 43s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [296 kB] 43s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [740 B] 43s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [9388 B] 44s Fetched 2609 kB in 1s (3115 kB/s) 44s Reading package lists... 46s Reading package lists... 46s Building dependency tree... 46s Reading state information... 46s Calculating upgrade... 46s The following NEW packages will be installed: 46s python3.13-gdbm 46s The following packages will be upgraded: 46s libcap-ng0 libpython3-stdlib pastebinit python3 python3-gdbm python3-minimal 46s python3-systemd 47s 7 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 47s Need to get 178 kB of archives. 47s After this operation, 256 kB of additional disk space will be used. 47s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-minimal amd64 3.12.7-1 [27.4 kB] 47s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3 amd64 3.12.7-1 [24.0 kB] 47s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpython3-stdlib amd64 3.12.7-1 [10.0 kB] 47s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libcap-ng0 amd64 0.8.5-3build1 [15.6 kB] 47s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-gdbm amd64 3.13.0-2 [31.3 kB] 47s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-gdbm amd64 3.12.7-1 [8642 B] 47s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 pastebinit all 1.7.1-1 [14.9 kB] 47s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-systemd amd64 235-1build5 [45.7 kB] 47s Fetched 178 kB in 0s (438 kB/s) 47s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75542 files and directories currently installed.) 47s Preparing to unpack .../python3-minimal_3.12.7-1_amd64.deb ... 47s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 47s Setting up python3-minimal (3.12.7-1) ... 47s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75542 files and directories currently installed.) 47s Preparing to unpack .../python3_3.12.7-1_amd64.deb ... 47s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 47s Preparing to unpack .../libpython3-stdlib_3.12.7-1_amd64.deb ... 47s Unpacking libpython3-stdlib:amd64 (3.12.7-1) over (3.12.6-0ubuntu1) ... 48s Preparing to unpack .../libcap-ng0_0.8.5-3build1_amd64.deb ... 48s Unpacking libcap-ng0:amd64 (0.8.5-3build1) over (0.8.5-1) ... 48s Setting up libcap-ng0:amd64 (0.8.5-3build1) ... 48s Selecting previously unselected package python3.13-gdbm. 48s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75542 files and directories currently installed.) 48s Preparing to unpack .../python3.13-gdbm_3.13.0-2_amd64.deb ... 48s Unpacking python3.13-gdbm (3.13.0-2) ... 48s Preparing to unpack .../python3-gdbm_3.12.7-1_amd64.deb ... 48s Unpacking python3-gdbm:amd64 (3.12.7-1) over (3.12.6-1ubuntu1) ... 48s Preparing to unpack .../pastebinit_1.7.1-1_all.deb ... 48s Unpacking pastebinit (1.7.1-1) over (1.7.0-1) ... 48s Preparing to unpack .../python3-systemd_235-1build5_amd64.deb ... 48s Unpacking python3-systemd (235-1build5) over (235-1build4) ... 48s Setting up python3.13-gdbm (3.13.0-2) ... 48s Setting up libpython3-stdlib:amd64 (3.12.7-1) ... 48s Setting up python3 (3.12.7-1) ... 48s Setting up python3-systemd (235-1build5) ... 48s Setting up python3-gdbm:amd64 (3.12.7-1) ... 48s Setting up pastebinit (1.7.1-1) ... 48s Processing triggers for libc-bin (2.40-1ubuntu3) ... 48s Processing triggers for man-db (2.12.1-3) ... 49s Reading package lists... 49s Building dependency tree... 49s Reading state information... 49s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 49s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 49s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 50s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 50s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 50s Reading package lists... 50s Reading package lists... 51s Building dependency tree... 51s Reading state information... 51s Calculating upgrade... 51s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 51s Reading package lists... 51s Building dependency tree... 51s Reading state information... 51s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 54s autopkgtest [21:44:25]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 13:41:20 UTC 2024 54s autopkgtest [21:44:25]: @@@@@@@@@@@@@@@@@@@@ apt-source python-weblogo 56s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-weblogo 3.8.0-1 (dsc) [2220 B] 56s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-weblogo 3.8.0-1 (tar) [935 kB] 56s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-weblogo 3.8.0-1 (diff) [8344 B] 56s gpgv: Signature made Mon Oct 7 06:39:27 2024 UTC 56s gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 56s gpgv: issuer "merkys@debian.org" 56s gpgv: Can't check signature: No public key 56s dpkg-source: warning: cannot verify inline signature for ./python-weblogo_3.8.0-1.dsc: no acceptable signature found 56s autopkgtest [21:44:27]: testing package python-weblogo version 3.8.0-1 56s autopkgtest [21:44:27]: build not needed 57s autopkgtest [21:44:28]: test pybuild-autopkgtest: preparing testbed 58s Reading package lists... 58s Building dependency tree... 58s Reading state information... 59s Starting pkgProblemResolver with broken count: 0 59s Starting 2 pkgProblemResolver with broken count: 0 59s Done 59s The following additional packages will be installed: 59s autoconf automake autopoint autotools-dev build-essential cpp cpp-14 59s cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu debhelper debugedit 59s dh-autoreconf dh-python dh-strip-nondeterminism dwz fontconfig-config 59s fonts-glyphicons-halflings fonts-urw-base35 g++ g++-14 59s g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 59s gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gettext ghostscript help2man 59s intltool-debian libarchive-zip-perl libasan8 libavahi-client3 59s libavahi-common-data libavahi-common3 libblas3 libcc1-0 libcups2t64 59s libdebhelper-perl libdeflate0 libexpat1-dev libfile-stripnondeterminism-perl 59s libfontconfig1 libfontenc1 libgcc-14-dev libgfortran5 libgomp1 libgs-common 59s libgs10 libgs10-common libhwasan0 libice6 libidn12 libijs-0.35 libisl23 59s libitm1 libjbig0 libjbig2dec0 libjpeg-turbo8 libjpeg8 libjs-bootstrap 59s libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 liblerc4 59s liblsan0 libmpc3 libopenjp2-7 libpaper1 libpython3-all-dev libpython3-dev 59s libpython3.12-dev libpython3.13 libpython3.13-dev libpython3.13-minimal 59s libpython3.13-stdlib libquadmath0 libsharpyuv0 libsm6 libstdc++-14-dev 59s libtiff6 libtool libtsan2 libubsan1 libwebp7 libxt6t64 m4 po-debconf 59s poppler-data pybuild-plugin-autopkgtest python3-all python3-all-dev 59s python3-decorator python3-dev python3-iniconfig python3-numpy 59s python3-packaging python3-pluggy python3-pytest python3-scipy 59s python3-setuptools-scm python3-weblogo python3.12-dev python3.13 59s python3.13-dev python3.13-minimal x11-common xfonts-encodings xfonts-utils 59s zlib1g-dev 59s Suggested packages: 59s autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-14-locales 59s cpp-14-doc dh-make flit python3-build python3-installer python3-wheel 59s fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre g++-multilib 59s g++-14-multilib gcc-14-doc gcc-multilib manpages-dev flex bison gdb gcc-doc 59s gcc-14-multilib gdb-x86-64-linux-gnu gettext-doc libasprintf-dev 59s libgettextpo-dev texlive-binaries cups-common libstdc++-14-doc libtool-doc 59s gfortran | fortran95-compiler gcj-jdk m4-doc libmail-box-perl poppler-utils 59s fonts-japanese-mincho | fonts-ipafont-mincho fonts-japanese-gothic 59s | fonts-ipafont-gothic fonts-arphic-ukai fonts-arphic-uming fonts-nanum 59s gfortran python-numpy-doc python-scipy-doc python3.13-venv python3.13-doc 59s binfmt-support 59s Recommended packages: 59s libarchive-cpio-perl fonts-droid-fallback javascript-common libpaper-utils 59s libltdl-dev libmail-sendmail-perl python3-pil 59s The following NEW packages will be installed: 59s autoconf automake autopkgtest-satdep autopoint autotools-dev build-essential 59s cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu debhelper debugedit 59s dh-autoreconf dh-python dh-strip-nondeterminism dwz fontconfig-config 59s fonts-glyphicons-halflings fonts-urw-base35 g++ g++-14 59s g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 59s gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gettext ghostscript help2man 59s intltool-debian libarchive-zip-perl libasan8 libavahi-client3 59s libavahi-common-data libavahi-common3 libblas3 libcc1-0 libcups2t64 59s libdebhelper-perl libdeflate0 libexpat1-dev libfile-stripnondeterminism-perl 59s libfontconfig1 libfontenc1 libgcc-14-dev libgfortran5 libgomp1 libgs-common 59s libgs10 libgs10-common libhwasan0 libice6 libidn12 libijs-0.35 libisl23 59s libitm1 libjbig0 libjbig2dec0 libjpeg-turbo8 libjpeg8 libjs-bootstrap 59s libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 liblerc4 59s liblsan0 libmpc3 libopenjp2-7 libpaper1 libpython3-all-dev libpython3-dev 59s libpython3.12-dev libpython3.13 libpython3.13-dev libpython3.13-minimal 59s libpython3.13-stdlib libquadmath0 libsharpyuv0 libsm6 libstdc++-14-dev 59s libtiff6 libtool libtsan2 libubsan1 libwebp7 libxt6t64 m4 po-debconf 59s poppler-data pybuild-plugin-autopkgtest python3-all python3-all-dev 59s python3-decorator python3-dev python3-iniconfig python3-numpy 59s python3-packaging python3-pluggy python3-pytest python3-scipy 59s python3-setuptools-scm python3-weblogo python3.12-dev python3.13 59s python3.13-dev python3.13-minimal x11-common xfonts-encodings xfonts-utils 59s zlib1g-dev 59s 0 upgraded, 113 newly installed, 0 to remove and 0 not upgraded. 59s Need to get 141 MB/141 MB of archives. 59s After this operation, 506 MB of additional disk space will be used. 59s Get:1 /tmp/autopkgtest.Okbg6t/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [820 B] 59s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 poppler-data all 0.4.12-1 [2060 kB] 60s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.0-2 [879 kB] 60s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.0-2 [2188 kB] 61s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 m4 amd64 1.4.19-4build1 [244 kB] 61s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 autoconf all 2.72-3 [382 kB] 61s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 autotools-dev all 20220109.1 [44.9 kB] 61s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 automake all 1:1.16.5-1.3ubuntu1 [558 kB] 61s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 autopoint all 0.22.5-2 [616 kB] 61s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 61s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 61s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-8ubuntu1 [11.9 MB] 62s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-8ubuntu1 [1030 B] 62s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [5452 B] 62s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.1.0-2ubuntu1 [22.4 kB] 62s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 14.2.0-8ubuntu1 [47.6 kB] 62s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-8ubuntu1 [148 kB] 62s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 14.2.0-8ubuntu1 [29.1 kB] 62s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 14.2.0-8ubuntu1 [2998 kB] 62s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 14.2.0-8ubuntu1 [1317 kB] 62s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 14.2.0-8ubuntu1 [2732 kB] 63s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 14.2.0-8ubuntu1 [1177 kB] 63s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 14.2.0-8ubuntu1 [1634 kB] 63s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 14.2.0-8ubuntu1 [153 kB] 63s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-8ubuntu1 [2814 kB] 63s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-8ubuntu1 [23.3 MB] 63s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-8ubuntu1 [528 kB] 63s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1214 B] 63s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.1.0-2ubuntu1 [5000 B] 63s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-8ubuntu1 [2504 kB] 64s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-8ubuntu1 [13.3 MB] 64s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-8ubuntu1 [19.9 kB] 64s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [966 B] 64s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.1.0-2ubuntu1 [1100 B] 64s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 64s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebhelper-perl all 13.20ubuntu1 [94.2 kB] 64s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libtool all 2.4.7-7build1 [166 kB] 64s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 dh-autoreconf all 20 [16.1 kB] 64s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libarchive-zip-perl all 1.68-1 [90.2 kB] 64s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [20.1 kB] 64s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 dh-strip-nondeterminism all 1.14.0-1 [5058 B] 64s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 debugedit amd64 1:5.1-1 [46.9 kB] 64s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 dwz amd64 0.15-1build6 [115 kB] 64s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 gettext amd64 0.22.5-2 [948 kB] 64s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 intltool-debian all 0.35.0+20060710.6 [23.2 kB] 64s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 po-debconf all 1.0.21+nmu1 [233 kB] 64s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 debhelper all 13.20ubuntu1 [893 kB] 64s Get:48 http://ftpmaster.internal/ubuntu plucky/universe amd64 dh-python all 6.20241024 [112 kB] 64s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontenc1 amd64 1:1.1.8-1build1 [14.0 kB] 64s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 64s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB] 64s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 xfonts-utils amd64 1:7.7+7 [97.1 kB] 64s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-urw-base35 all 20200910-8 [11.0 MB] 65s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB] 65s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 65s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libgs-common all 10.03.1~dfsg1-0ubuntu3 [175 kB] 65s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libgs10-common all 10.03.1~dfsg1-0ubuntu3 [488 kB] 65s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libavahi-common-data amd64 0.8-13ubuntu6 [29.7 kB] 65s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libavahi-common3 amd64 0.8-13ubuntu6 [23.3 kB] 65s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libavahi-client3 amd64 0.8-13ubuntu6 [26.8 kB] 65s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libcups2t64 amd64 2.4.10-1ubuntu2 [271 kB] 65s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB] 65s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 libidn12 amd64 1.42-2 [55.9 kB] 65s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libijs-0.35 amd64 0.35-15.1build1 [15.3 kB] 65s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig2dec0 amd64 0.20-1build3 [65.0 kB] 65s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-2ubuntu2 [150 kB] 65s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 65s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libopenjp2-7 amd64 2.5.0-2ubuntu1 [184 kB] 65s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper1 amd64 1.1.29build1 [13.4 kB] 65s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.22-1 [64.5 kB] 65s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 65s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-4ubuntu2 [179 kB] 65s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [17.5 kB] 65s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.4.0-0.1 [231 kB] 65s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 65s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 65s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 65s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 65s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 libgs10 amd64 10.03.1~dfsg1-0ubuntu3 [4579 kB] 65s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 ghostscript amd64 10.03.1~dfsg1-0ubuntu3 [43.5 kB] 65s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 help2man amd64 1.49.3 [201 kB] 65s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-3build2 [247 kB] 65s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 libexpat1-dev amd64 2.6.2-2 [140 kB] 65s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-8ubuntu1 [909 kB] 65s Get:85 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 65s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 65s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 65s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-sphinxdoc all 7.4.7-4 [158 kB] 65s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-3build2 [2668 kB] 65s Get:90 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblbfgsb0 amd64 3.0+dfsg.4-1build1 [29.9 kB] 65s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 65s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.12-dev amd64 3.12.7-3 [5699 kB] 65s Get:93 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpython3-dev amd64 3.12.7-1 [10.3 kB] 65s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.0-2 [2107 kB] 66s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13 amd64 3.13.0-2 [2321 kB] 66s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-dev amd64 3.13.0-2 [5488 kB] 66s Get:97 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpython3-all-dev amd64 3.12.7-1 [916 B] 66s Get:98 http://ftpmaster.internal/ubuntu plucky/universe amd64 pybuild-plugin-autopkgtest all 6.20241024 [1746 B] 66s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.0-2 [719 kB] 66s Get:100 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-all amd64 3.12.7-1 [890 B] 66s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12-dev amd64 3.12.7-3 [505 kB] 66s Get:102 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-dev amd64 3.12.7-1 [26.7 kB] 66s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-dev amd64 3.13.0-2 [507 kB] 66s Get:104 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-all-dev amd64 3.12.7-1 [914 B] 66s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-decorator all 5.1.1-5 [10.1 kB] 66s Get:106 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-iniconfig all 1.1.1-2 [6024 B] 66s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-numpy amd64 1:1.26.4+ds-11build1 [4479 kB] 67s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-packaging all 24.1-1 [41.4 kB] 67s Get:109 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pluggy all 1.5.0-1 [21.0 kB] 67s Get:110 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pytest all 8.3.3-1 [251 kB] 67s Get:111 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-setuptools-scm all 8.1.0-1 [32.2 kB] 67s Get:112 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-scipy amd64 1.13.1-5 [18.2 MB] 67s Get:113 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-weblogo all 3.8.0-1 [116 kB] 68s Preconfiguring packages ... 68s Fetched 141 MB in 8s (16.7 MB/s) 68s Selecting previously unselected package poppler-data. 68s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75554 files and directories currently installed.) 68s Preparing to unpack .../000-poppler-data_0.4.12-1_all.deb ... 68s Unpacking poppler-data (0.4.12-1) ... 68s Selecting previously unselected package libpython3.13-minimal:amd64. 68s Preparing to unpack .../001-libpython3.13-minimal_3.13.0-2_amd64.deb ... 68s Unpacking libpython3.13-minimal:amd64 (3.13.0-2) ... 68s Selecting previously unselected package python3.13-minimal. 68s Preparing to unpack .../002-python3.13-minimal_3.13.0-2_amd64.deb ... 68s Unpacking python3.13-minimal (3.13.0-2) ... 68s Selecting previously unselected package m4. 68s Preparing to unpack .../003-m4_1.4.19-4build1_amd64.deb ... 68s Unpacking m4 (1.4.19-4build1) ... 68s Selecting previously unselected package autoconf. 68s Preparing to unpack .../004-autoconf_2.72-3_all.deb ... 68s Unpacking autoconf (2.72-3) ... 68s Selecting previously unselected package autotools-dev. 68s Preparing to unpack .../005-autotools-dev_20220109.1_all.deb ... 68s Unpacking autotools-dev (20220109.1) ... 68s Selecting previously unselected package automake. 68s Preparing to unpack .../006-automake_1%3a1.16.5-1.3ubuntu1_all.deb ... 68s Unpacking automake (1:1.16.5-1.3ubuntu1) ... 68s Selecting previously unselected package autopoint. 68s Preparing to unpack .../007-autopoint_0.22.5-2_all.deb ... 68s Unpacking autopoint (0.22.5-2) ... 68s Selecting previously unselected package libisl23:amd64. 68s Preparing to unpack .../008-libisl23_0.27-1_amd64.deb ... 68s Unpacking libisl23:amd64 (0.27-1) ... 68s Selecting previously unselected package libmpc3:amd64. 68s Preparing to unpack .../009-libmpc3_1.3.1-1build2_amd64.deb ... 68s Unpacking libmpc3:amd64 (1.3.1-1build2) ... 68s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 68s Preparing to unpack .../010-cpp-14-x86-64-linux-gnu_14.2.0-8ubuntu1_amd64.deb ... 68s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ... 69s Selecting previously unselected package cpp-14. 69s Preparing to unpack .../011-cpp-14_14.2.0-8ubuntu1_amd64.deb ... 69s Unpacking cpp-14 (14.2.0-8ubuntu1) ... 69s Selecting previously unselected package cpp-x86-64-linux-gnu. 69s Preparing to unpack .../012-cpp-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 69s Unpacking cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 69s Selecting previously unselected package cpp. 69s Preparing to unpack .../013-cpp_4%3a14.1.0-2ubuntu1_amd64.deb ... 69s Unpacking cpp (4:14.1.0-2ubuntu1) ... 69s Selecting previously unselected package libcc1-0:amd64. 69s Preparing to unpack .../014-libcc1-0_14.2.0-8ubuntu1_amd64.deb ... 69s Unpacking libcc1-0:amd64 (14.2.0-8ubuntu1) ... 69s Selecting previously unselected package libgomp1:amd64. 69s Preparing to unpack .../015-libgomp1_14.2.0-8ubuntu1_amd64.deb ... 69s Unpacking libgomp1:amd64 (14.2.0-8ubuntu1) ... 69s Selecting previously unselected package libitm1:amd64. 69s Preparing to unpack .../016-libitm1_14.2.0-8ubuntu1_amd64.deb ... 69s Unpacking libitm1:amd64 (14.2.0-8ubuntu1) ... 69s Selecting previously unselected package libasan8:amd64. 69s Preparing to unpack .../017-libasan8_14.2.0-8ubuntu1_amd64.deb ... 69s Unpacking libasan8:amd64 (14.2.0-8ubuntu1) ... 69s Selecting previously unselected package liblsan0:amd64. 69s Preparing to unpack .../018-liblsan0_14.2.0-8ubuntu1_amd64.deb ... 69s Unpacking liblsan0:amd64 (14.2.0-8ubuntu1) ... 69s Selecting previously unselected package libtsan2:amd64. 69s Preparing to unpack .../019-libtsan2_14.2.0-8ubuntu1_amd64.deb ... 69s Unpacking libtsan2:amd64 (14.2.0-8ubuntu1) ... 69s Selecting previously unselected package libubsan1:amd64. 69s Preparing to unpack .../020-libubsan1_14.2.0-8ubuntu1_amd64.deb ... 69s Unpacking libubsan1:amd64 (14.2.0-8ubuntu1) ... 69s Selecting previously unselected package libhwasan0:amd64. 69s Preparing to unpack .../021-libhwasan0_14.2.0-8ubuntu1_amd64.deb ... 69s Unpacking libhwasan0:amd64 (14.2.0-8ubuntu1) ... 69s Selecting previously unselected package libquadmath0:amd64. 69s Preparing to unpack .../022-libquadmath0_14.2.0-8ubuntu1_amd64.deb ... 69s Unpacking libquadmath0:amd64 (14.2.0-8ubuntu1) ... 69s Selecting previously unselected package libgcc-14-dev:amd64. 69s Preparing to unpack .../023-libgcc-14-dev_14.2.0-8ubuntu1_amd64.deb ... 69s Unpacking libgcc-14-dev:amd64 (14.2.0-8ubuntu1) ... 69s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 69s Preparing to unpack .../024-gcc-14-x86-64-linux-gnu_14.2.0-8ubuntu1_amd64.deb ... 69s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ... 69s Selecting previously unselected package gcc-14. 69s Preparing to unpack .../025-gcc-14_14.2.0-8ubuntu1_amd64.deb ... 69s Unpacking gcc-14 (14.2.0-8ubuntu1) ... 69s Selecting previously unselected package gcc-x86-64-linux-gnu. 69s Preparing to unpack .../026-gcc-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 69s Unpacking gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 69s Selecting previously unselected package gcc. 69s Preparing to unpack .../027-gcc_4%3a14.1.0-2ubuntu1_amd64.deb ... 69s Unpacking gcc (4:14.1.0-2ubuntu1) ... 69s Selecting previously unselected package libstdc++-14-dev:amd64. 69s Preparing to unpack .../028-libstdc++-14-dev_14.2.0-8ubuntu1_amd64.deb ... 69s Unpacking libstdc++-14-dev:amd64 (14.2.0-8ubuntu1) ... 70s Selecting previously unselected package g++-14-x86-64-linux-gnu. 70s Preparing to unpack .../029-g++-14-x86-64-linux-gnu_14.2.0-8ubuntu1_amd64.deb ... 70s Unpacking g++-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ... 70s Selecting previously unselected package g++-14. 70s Preparing to unpack .../030-g++-14_14.2.0-8ubuntu1_amd64.deb ... 70s Unpacking g++-14 (14.2.0-8ubuntu1) ... 70s Selecting previously unselected package g++-x86-64-linux-gnu. 70s Preparing to unpack .../031-g++-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 70s Unpacking g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 70s Selecting previously unselected package g++. 70s Preparing to unpack .../032-g++_4%3a14.1.0-2ubuntu1_amd64.deb ... 70s Unpacking g++ (4:14.1.0-2ubuntu1) ... 70s Selecting previously unselected package build-essential. 70s Preparing to unpack .../033-build-essential_12.10ubuntu1_amd64.deb ... 70s Unpacking build-essential (12.10ubuntu1) ... 70s Selecting previously unselected package libdebhelper-perl. 70s Preparing to unpack .../034-libdebhelper-perl_13.20ubuntu1_all.deb ... 70s Unpacking libdebhelper-perl (13.20ubuntu1) ... 70s Selecting previously unselected package libtool. 70s Preparing to unpack .../035-libtool_2.4.7-7build1_all.deb ... 70s Unpacking libtool (2.4.7-7build1) ... 70s Selecting previously unselected package dh-autoreconf. 70s Preparing to unpack .../036-dh-autoreconf_20_all.deb ... 70s Unpacking dh-autoreconf (20) ... 70s Selecting previously unselected package libarchive-zip-perl. 70s Preparing to unpack .../037-libarchive-zip-perl_1.68-1_all.deb ... 70s Unpacking libarchive-zip-perl (1.68-1) ... 70s Selecting previously unselected package libfile-stripnondeterminism-perl. 70s Preparing to unpack .../038-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... 70s Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... 70s Selecting previously unselected package dh-strip-nondeterminism. 70s Preparing to unpack .../039-dh-strip-nondeterminism_1.14.0-1_all.deb ... 70s Unpacking dh-strip-nondeterminism (1.14.0-1) ... 70s Selecting previously unselected package debugedit. 70s Preparing to unpack .../040-debugedit_1%3a5.1-1_amd64.deb ... 70s Unpacking debugedit (1:5.1-1) ... 70s Selecting previously unselected package dwz. 70s Preparing to unpack .../041-dwz_0.15-1build6_amd64.deb ... 70s Unpacking dwz (0.15-1build6) ... 70s Selecting previously unselected package gettext. 70s Preparing to unpack .../042-gettext_0.22.5-2_amd64.deb ... 70s Unpacking gettext (0.22.5-2) ... 70s Selecting previously unselected package intltool-debian. 70s Preparing to unpack .../043-intltool-debian_0.35.0+20060710.6_all.deb ... 70s Unpacking intltool-debian (0.35.0+20060710.6) ... 70s Selecting previously unselected package po-debconf. 70s Preparing to unpack .../044-po-debconf_1.0.21+nmu1_all.deb ... 70s Unpacking po-debconf (1.0.21+nmu1) ... 70s Selecting previously unselected package debhelper. 70s Preparing to unpack .../045-debhelper_13.20ubuntu1_all.deb ... 70s Unpacking debhelper (13.20ubuntu1) ... 70s Selecting previously unselected package dh-python. 70s Preparing to unpack .../046-dh-python_6.20241024_all.deb ... 70s Unpacking dh-python (6.20241024) ... 70s Selecting previously unselected package libfontenc1:amd64. 70s Preparing to unpack .../047-libfontenc1_1%3a1.1.8-1build1_amd64.deb ... 70s Unpacking libfontenc1:amd64 (1:1.1.8-1build1) ... 70s Selecting previously unselected package x11-common. 70s Preparing to unpack .../048-x11-common_1%3a7.7+23ubuntu3_all.deb ... 70s Unpacking x11-common (1:7.7+23ubuntu3) ... 70s Selecting previously unselected package xfonts-encodings. 70s Preparing to unpack .../049-xfonts-encodings_1%3a1.0.5-0ubuntu2_all.deb ... 70s Unpacking xfonts-encodings (1:1.0.5-0ubuntu2) ... 70s Selecting previously unselected package xfonts-utils. 70s Preparing to unpack .../050-xfonts-utils_1%3a7.7+7_amd64.deb ... 70s Unpacking xfonts-utils (1:7.7+7) ... 70s Selecting previously unselected package fonts-urw-base35. 71s Preparing to unpack .../051-fonts-urw-base35_20200910-8_all.deb ... 71s Unpacking fonts-urw-base35 (20200910-8) ... 71s Selecting previously unselected package fontconfig-config. 71s Preparing to unpack .../052-fontconfig-config_2.15.0-1.1ubuntu2_amd64.deb ... 71s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 71s Selecting previously unselected package fonts-glyphicons-halflings. 71s Preparing to unpack .../053-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 71s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 71s Selecting previously unselected package libgs-common. 71s Preparing to unpack .../054-libgs-common_10.03.1~dfsg1-0ubuntu3_all.deb ... 71s Unpacking libgs-common (10.03.1~dfsg1-0ubuntu3) ... 71s Selecting previously unselected package libgs10-common. 71s Preparing to unpack .../055-libgs10-common_10.03.1~dfsg1-0ubuntu3_all.deb ... 71s Unpacking libgs10-common (10.03.1~dfsg1-0ubuntu3) ... 71s Selecting previously unselected package libavahi-common-data:amd64. 71s Preparing to unpack .../056-libavahi-common-data_0.8-13ubuntu6_amd64.deb ... 71s Unpacking libavahi-common-data:amd64 (0.8-13ubuntu6) ... 71s Selecting previously unselected package libavahi-common3:amd64. 71s Preparing to unpack .../057-libavahi-common3_0.8-13ubuntu6_amd64.deb ... 71s Unpacking libavahi-common3:amd64 (0.8-13ubuntu6) ... 71s Selecting previously unselected package libavahi-client3:amd64. 71s Preparing to unpack .../058-libavahi-client3_0.8-13ubuntu6_amd64.deb ... 71s Unpacking libavahi-client3:amd64 (0.8-13ubuntu6) ... 71s Selecting previously unselected package libcups2t64:amd64. 71s Preparing to unpack .../059-libcups2t64_2.4.10-1ubuntu2_amd64.deb ... 71s Unpacking libcups2t64:amd64 (2.4.10-1ubuntu2) ... 71s Selecting previously unselected package libfontconfig1:amd64. 71s Preparing to unpack .../060-libfontconfig1_2.15.0-1.1ubuntu2_amd64.deb ... 71s Unpacking libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ... 71s Selecting previously unselected package libidn12:amd64. 71s Preparing to unpack .../061-libidn12_1.42-2_amd64.deb ... 71s Unpacking libidn12:amd64 (1.42-2) ... 71s Selecting previously unselected package libijs-0.35:amd64. 71s Preparing to unpack .../062-libijs-0.35_0.35-15.1build1_amd64.deb ... 71s Unpacking libijs-0.35:amd64 (0.35-15.1build1) ... 71s Selecting previously unselected package libjbig2dec0:amd64. 71s Preparing to unpack .../063-libjbig2dec0_0.20-1build3_amd64.deb ... 71s Unpacking libjbig2dec0:amd64 (0.20-1build3) ... 71s Selecting previously unselected package libjpeg-turbo8:amd64. 71s Preparing to unpack .../064-libjpeg-turbo8_2.1.5-2ubuntu2_amd64.deb ... 71s Unpacking libjpeg-turbo8:amd64 (2.1.5-2ubuntu2) ... 71s Selecting previously unselected package libjpeg8:amd64. 71s Preparing to unpack .../065-libjpeg8_8c-2ubuntu11_amd64.deb ... 71s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 71s Selecting previously unselected package libopenjp2-7:amd64. 71s Preparing to unpack .../066-libopenjp2-7_2.5.0-2ubuntu1_amd64.deb ... 71s Unpacking libopenjp2-7:amd64 (2.5.0-2ubuntu1) ... 71s Selecting previously unselected package libpaper1:amd64. 71s Preparing to unpack .../067-libpaper1_1.1.29build1_amd64.deb ... 71s Unpacking libpaper1:amd64 (1.1.29build1) ... 71s Selecting previously unselected package libdeflate0:amd64. 71s Preparing to unpack .../068-libdeflate0_1.22-1_amd64.deb ... 71s Unpacking libdeflate0:amd64 (1.22-1) ... 71s Selecting previously unselected package libjbig0:amd64. 71s Preparing to unpack .../069-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 71s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 71s Selecting previously unselected package liblerc4:amd64. 71s Preparing to unpack .../070-liblerc4_4.0.0+ds-4ubuntu2_amd64.deb ... 71s Unpacking liblerc4:amd64 (4.0.0+ds-4ubuntu2) ... 71s Selecting previously unselected package libsharpyuv0:amd64. 71s Preparing to unpack .../071-libsharpyuv0_1.4.0-0.1_amd64.deb ... 71s Unpacking libsharpyuv0:amd64 (1.4.0-0.1) ... 71s Selecting previously unselected package libwebp7:amd64. 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87s Processing triggers for libc-bin (2.40-1ubuntu3) ... 91s (Reading database ... 83605 files and directories currently installed.) 91s Removing autopkgtest-satdep (0) ... 91s autopkgtest [21:45:02]: test pybuild-autopkgtest: pybuild-autopkgtest 91s autopkgtest [21:45:02]: test pybuild-autopkgtest: [----------------------- 92s pybuild-autopkgtest 92s I: pybuild base:311: cd /tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build; python3.13 -m pytest -k 'not test_transformseq and not test_cli and not test_resources' 93s ============================= test session starts ============================== 93s platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 93s rootdir: /tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build 93s plugins: typeguard-4.4.1 93s collected 0 items / 23 errors 93s 93s ==================================== ERRORS ==================================== 93s ___________________ ERROR collecting tests/test_array_io.py ____________________ 93s ImportError while importing test module '/tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build/tests/test_array_io.py'. 93s Hint: make sure your test modules/packages have valid Python names. 93s Traceback: 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 93s from . import multiarray 93s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 93s from . import overrides 93s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 93s from numpy.core._multiarray_umath import ( 93s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 93s 93s During handling of the above exception, another exception occurred: 93s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 93s from numpy.__config__ import show as show_config 93s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 93s from numpy.core._multiarray_umath import ( 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 93s raise ImportError(msg) 93s E ImportError: 93s E 93s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 93s E 93s E Importing the numpy C-extensions failed. This error can happen for 93s E many reasons, often due to issues with your setup or how NumPy was 93s E installed. 93s E 93s E We have compiled some common reasons and troubleshooting tips at: 93s E 93s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 93s E 93s E Please note and check the following: 93s E 93s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 93s E * The NumPy version is: "1.26.4" 93s E 93s E and make sure that they are the versions you expect. 93s E Please carefully study the documentation linked above for further help. 93s E 93s E Original error was: No module named 'numpy.core._multiarray_umath' 93s 93s The above exception was the direct cause of the following exception: 93s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 93s return _bootstrap._gcd_import(name[level:], package, level) 93s tests/__init__.py:5: in 93s from weblogo.utils import resource_filename, resource_stream, resource_string 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 93s from .logo import * # noqa: F401, F403 93s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 93s import numpy as np 93s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 93s raise ImportError(msg) from e 93s E ImportError: Error importing numpy: you should not try to import numpy from 93s E its source directory; please exit the numpy source tree, and relaunch 93s E your python interpreter from there. 93s ______________________ ERROR collecting tests/test_cli.py ______________________ 93s ImportError while importing test module '/tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build/tests/test_cli.py'. 93s Hint: make sure your test modules/packages have valid Python names. 93s Traceback: 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 93s from . import multiarray 93s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 93s from . import overrides 93s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 93s from numpy.core._multiarray_umath import ( 93s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 93s 93s During handling of the above exception, another exception occurred: 93s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 93s from numpy.__config__ import show as show_config 93s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 93s from numpy.core._multiarray_umath import ( 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 93s raise ImportError(msg) 93s E ImportError: 93s E 93s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 93s E 93s E Importing the numpy C-extensions failed. This error can happen for 93s E many reasons, often due to issues with your setup or how NumPy was 93s E installed. 93s E 93s E We have compiled some common reasons and troubleshooting tips at: 93s E 93s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 93s E 93s E Please note and check the following: 93s E 93s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 93s E * The NumPy version is: "1.26.4" 93s E 93s E and make sure that they are the versions you expect. 93s E Please carefully study the documentation linked above for further help. 93s E 93s E Original error was: No module named 'numpy.core._multiarray_umath' 93s 93s The above exception was the direct cause of the following exception: 93s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 93s return _bootstrap._gcd_import(name[level:], package, level) 93s tests/__init__.py:5: in 93s from weblogo.utils import resource_filename, resource_stream, resource_string 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 93s from .logo import * # noqa: F401, F403 93s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 93s import numpy as np 93s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 93s raise ImportError(msg) from e 93s E ImportError: Error importing numpy: you should not try to import numpy from 93s E its source directory; please exit the numpy source tree, and relaunch 93s E your python interpreter from there. 93s __________________ ERROR collecting tests/test_clustal_io.py ___________________ 93s ImportError while importing test module '/tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build/tests/test_clustal_io.py'. 93s Hint: make sure your test modules/packages have valid Python names. 93s Traceback: 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 93s from . import multiarray 93s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 93s from . import overrides 93s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 93s from numpy.core._multiarray_umath import ( 93s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 93s 93s During handling of the above exception, another exception occurred: 93s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 93s from numpy.__config__ import show as show_config 93s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 93s from numpy.core._multiarray_umath import ( 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 93s raise ImportError(msg) 93s E ImportError: 93s E 93s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 93s E 93s E Importing the numpy C-extensions failed. This error can happen for 93s E many reasons, often due to issues with your setup or how NumPy was 93s E installed. 93s E 93s E We have compiled some common reasons and troubleshooting tips at: 93s E 93s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 93s E 93s E Please note and check the following: 93s E 93s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 93s E * The NumPy version is: "1.26.4" 93s E 93s E and make sure that they are the versions you expect. 93s E Please carefully study the documentation linked above for further help. 93s E 93s E Original error was: No module named 'numpy.core._multiarray_umath' 93s 93s The above exception was the direct cause of the following exception: 93s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 93s return _bootstrap._gcd_import(name[level:], package, level) 93s tests/__init__.py:5: in 93s from weblogo.utils import resource_filename, resource_stream, resource_string 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 93s from .logo import * # noqa: F401, F403 93s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 93s import numpy as np 93s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 93s raise ImportError(msg) from e 93s E ImportError: Error importing numpy: you should not try to import numpy from 93s E its source directory; please exit the numpy source tree, and relaunch 93s E your python interpreter from there. 93s _____________________ ERROR collecting tests/test_data.py ______________________ 93s ImportError while importing test module '/tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build/tests/test_data.py'. 93s Hint: make sure your test modules/packages have valid Python names. 93s Traceback: 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 93s from . import multiarray 93s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 93s from . import overrides 93s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 93s from numpy.core._multiarray_umath import ( 93s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 93s 93s During handling of the above exception, another exception occurred: 93s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 93s from numpy.__config__ import show as show_config 93s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 93s from numpy.core._multiarray_umath import ( 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 93s raise ImportError(msg) 93s E ImportError: 93s E 93s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 93s E 93s E Importing the numpy C-extensions failed. This error can happen for 93s E many reasons, often due to issues with your setup or how NumPy was 93s E installed. 93s E 93s E We have compiled some common reasons and troubleshooting tips at: 93s E 93s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 93s E 93s E Please note and check the following: 93s E 93s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 93s E * The NumPy version is: "1.26.4" 93s E 93s E and make sure that they are the versions you expect. 93s E Please carefully study the documentation linked above for further help. 93s E 93s E Original error was: No module named 'numpy.core._multiarray_umath' 93s 93s The above exception was the direct cause of the following exception: 93s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 93s return _bootstrap._gcd_import(name[level:], package, level) 93s tests/__init__.py:5: in 93s from weblogo.utils import resource_filename, resource_stream, resource_string 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 93s from .logo import * # noqa: F401, F403 93s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 93s import numpy as np 93s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 93s raise ImportError(msg) from e 93s E ImportError: Error importing numpy: you should not try to import numpy from 93s E its source directory; please exit the numpy source tree, and relaunch 93s E your python interpreter from there. 93s ___________________ ERROR collecting tests/test_fasta_io.py ____________________ 93s ImportError while importing test module '/tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build/tests/test_fasta_io.py'. 93s Hint: make sure your test modules/packages have valid Python names. 93s Traceback: 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 93s from . import multiarray 93s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 93s from . import overrides 93s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 93s from numpy.core._multiarray_umath import ( 93s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 93s 93s During handling of the above exception, another exception occurred: 93s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 93s from numpy.__config__ import show as show_config 93s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 93s from numpy.core._multiarray_umath import ( 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 93s raise ImportError(msg) 93s E ImportError: 93s E 93s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 93s E 93s E Importing the numpy C-extensions failed. This error can happen for 93s E many reasons, often due to issues with your setup or how NumPy was 93s E installed. 93s E 93s E We have compiled some common reasons and troubleshooting tips at: 93s E 93s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 93s E 93s E Please note and check the following: 93s E 93s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 93s E * The NumPy version is: "1.26.4" 93s E 93s E and make sure that they are the versions you expect. 93s E Please carefully study the documentation linked above for further help. 93s E 93s E Original error was: No module named 'numpy.core._multiarray_umath' 93s 93s The above exception was the direct cause of the following exception: 93s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 93s return _bootstrap._gcd_import(name[level:], package, level) 93s tests/__init__.py:5: in 93s from weblogo.utils import resource_filename, resource_stream, resource_string 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 93s from .logo import * # noqa: F401, F403 93s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 93s import numpy as np 93s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 93s raise ImportError(msg) from e 93s E ImportError: Error importing numpy: you should not try to import numpy from 93s E its source directory; please exit the numpy source tree, and relaunch 93s E your python interpreter from there. 93s __________________ ERROR collecting tests/test_genbank_io.py ___________________ 93s ImportError while importing test module '/tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build/tests/test_genbank_io.py'. 93s Hint: make sure your test modules/packages have valid Python names. 93s Traceback: 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 93s from . import multiarray 93s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 93s from . import overrides 93s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 93s from numpy.core._multiarray_umath import ( 93s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 93s 93s During handling of the above exception, another exception occurred: 93s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 93s from numpy.__config__ import show as show_config 93s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 93s from numpy.core._multiarray_umath import ( 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 93s raise ImportError(msg) 93s E ImportError: 93s E 93s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 93s E 93s E Importing the numpy C-extensions failed. This error can happen for 93s E many reasons, often due to issues with your setup or how NumPy was 93s E installed. 93s E 93s E We have compiled some common reasons and troubleshooting tips at: 93s E 93s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 93s E 93s E Please note and check the following: 93s E 93s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 93s E * The NumPy version is: "1.26.4" 93s E 93s E and make sure that they are the versions you expect. 93s E Please carefully study the documentation linked above for further help. 93s E 93s E Original error was: No module named 'numpy.core._multiarray_umath' 93s 93s The above exception was the direct cause of the following exception: 93s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 93s return _bootstrap._gcd_import(name[level:], package, level) 93s tests/__init__.py:5: in 93s from weblogo.utils import resource_filename, resource_stream, resource_string 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 93s from .logo import * # noqa: F401, F403 93s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 93s import numpy as np 93s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 93s raise ImportError(msg) from e 93s E ImportError: Error importing numpy: you should not try to import numpy from 93s E its source directory; please exit the numpy source tree, and relaunch 93s E your python interpreter from there. 93s ______________ ERROR collecting tests/test_intelligenetics_io.py _______________ 93s ImportError while importing test module '/tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build/tests/test_intelligenetics_io.py'. 93s Hint: make sure your test modules/packages have valid Python names. 93s Traceback: 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 93s from . import multiarray 93s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 93s from . import overrides 93s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 93s from numpy.core._multiarray_umath import ( 93s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 93s 93s During handling of the above exception, another exception occurred: 93s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 93s from numpy.__config__ import show as show_config 93s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 93s from numpy.core._multiarray_umath import ( 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 93s raise ImportError(msg) 93s E ImportError: 93s E 93s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 93s E 93s E Importing the numpy C-extensions failed. This error can happen for 93s E many reasons, often due to issues with your setup or how NumPy was 93s E installed. 93s E 93s E We have compiled some common reasons and troubleshooting tips at: 93s E 93s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 93s E 93s E Please note and check the following: 93s E 93s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 93s E * The NumPy version is: "1.26.4" 93s E 93s E and make sure that they are the versions you expect. 93s E Please carefully study the documentation linked above for further help. 93s E 93s E Original error was: No module named 'numpy.core._multiarray_umath' 93s 93s The above exception was the direct cause of the following exception: 93s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 93s return _bootstrap._gcd_import(name[level:], package, level) 93s tests/__init__.py:5: in 93s from weblogo.utils import resource_filename, resource_stream, resource_string 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 93s from .logo import * # noqa: F401, F403 93s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 93s import numpy as np 93s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 93s raise ImportError(msg) from e 93s E ImportError: Error importing numpy: you should not try to import numpy from 93s E its source directory; please exit the numpy source tree, and relaunch 93s E your python interpreter from there. 93s ____________________ ERROR collecting tests/test_matrix.py _____________________ 93s ImportError while importing test module '/tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build/tests/test_matrix.py'. 93s Hint: make sure your test modules/packages have valid Python names. 93s Traceback: 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 93s from . import multiarray 93s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 93s from . import overrides 93s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 93s from numpy.core._multiarray_umath import ( 93s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 93s 93s During handling of the above exception, another exception occurred: 93s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 93s from numpy.__config__ import show as show_config 93s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 93s from numpy.core._multiarray_umath import ( 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 93s raise ImportError(msg) 93s E ImportError: 93s E 93s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 93s E 93s E Importing the numpy C-extensions failed. This error can happen for 93s E many reasons, often due to issues with your setup or how NumPy was 93s E installed. 93s E 93s E We have compiled some common reasons and troubleshooting tips at: 93s E 93s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 93s E 93s E Please note and check the following: 93s E 93s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 93s E * The NumPy version is: "1.26.4" 93s E 93s E and make sure that they are the versions you expect. 93s E Please carefully study the documentation linked above for further help. 93s E 93s E Original error was: No module named 'numpy.core._multiarray_umath' 93s 93s The above exception was the direct cause of the following exception: 93s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 93s return _bootstrap._gcd_import(name[level:], package, level) 93s tests/__init__.py:5: in 93s from weblogo.utils import resource_filename, resource_stream, resource_string 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 93s from .logo import * # noqa: F401, F403 93s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 93s import numpy as np 93s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 93s raise ImportError(msg) from e 93s E ImportError: Error importing numpy: you should not try to import numpy from 93s E its source directory; please exit the numpy source tree, and relaunch 93s E your python interpreter from there. 93s ____________________ ERROR collecting tests/test_msf_io.py _____________________ 93s ImportError while importing test module '/tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build/tests/test_msf_io.py'. 93s Hint: make sure your test modules/packages have valid Python names. 93s Traceback: 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 93s from . import multiarray 93s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 93s from . import overrides 93s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 93s from numpy.core._multiarray_umath import ( 93s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 93s 93s During handling of the above exception, another exception occurred: 93s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 93s from numpy.__config__ import show as show_config 93s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 93s from numpy.core._multiarray_umath import ( 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 93s raise ImportError(msg) 93s E ImportError: 93s E 93s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 93s E 93s E Importing the numpy C-extensions failed. This error can happen for 93s E many reasons, often due to issues with your setup or how NumPy was 93s E installed. 93s E 93s E We have compiled some common reasons and troubleshooting tips at: 93s E 93s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 93s E 93s E Please note and check the following: 93s E 93s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 93s E * The NumPy version is: "1.26.4" 93s E 93s E and make sure that they are the versions you expect. 93s E Please carefully study the documentation linked above for further help. 93s E 93s E Original error was: No module named 'numpy.core._multiarray_umath' 93s 93s The above exception was the direct cause of the following exception: 93s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 93s return _bootstrap._gcd_import(name[level:], package, level) 93s tests/__init__.py:5: in 93s from weblogo.utils import resource_filename, resource_stream, resource_string 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 93s from .logo import * # noqa: F401, F403 93s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 93s import numpy as np 93s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 93s raise ImportError(msg) from e 93s E ImportError: Error importing numpy: you should not try to import numpy from 93s E its source directory; please exit the numpy source tree, and relaunch 93s E your python interpreter from there. 93s ____________________ ERROR collecting tests/test_nbrf_io.py ____________________ 93s ImportError while importing test module '/tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build/tests/test_nbrf_io.py'. 93s Hint: make sure your test modules/packages have valid Python names. 93s Traceback: 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 93s from . import multiarray 93s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 93s from . import overrides 93s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 93s from numpy.core._multiarray_umath import ( 93s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 93s 93s During handling of the above exception, another exception occurred: 93s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 93s from numpy.__config__ import show as show_config 93s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 93s from numpy.core._multiarray_umath import ( 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 93s raise ImportError(msg) 93s E ImportError: 93s E 93s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 93s E 93s E Importing the numpy C-extensions failed. This error can happen for 93s E many reasons, often due to issues with your setup or how NumPy was 93s E installed. 93s E 93s E We have compiled some common reasons and troubleshooting tips at: 93s E 93s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 93s E 93s E Please note and check the following: 93s E 93s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 93s E * The NumPy version is: "1.26.4" 93s E 93s E and make sure that they are the versions you expect. 93s E Please carefully study the documentation linked above for further help. 93s E 93s E Original error was: No module named 'numpy.core._multiarray_umath' 93s 93s The above exception was the direct cause of the following exception: 93s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 93s return _bootstrap._gcd_import(name[level:], package, level) 93s tests/__init__.py:5: in 93s from weblogo.utils import resource_filename, resource_stream, resource_string 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 93s from .logo import * # noqa: F401, F403 93s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 93s import numpy as np 93s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 93s raise ImportError(msg) from e 93s E ImportError: Error importing numpy: you should not try to import numpy from 93s E its source directory; please exit the numpy source tree, and relaunch 93s E your python interpreter from there. 93s _____________________ ERROR collecting tests/test_nexus.py _____________________ 93s ImportError while importing test module '/tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build/tests/test_nexus.py'. 93s Hint: make sure your test modules/packages have valid Python names. 93s Traceback: 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 93s from . import multiarray 93s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 93s from . import overrides 93s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 93s from numpy.core._multiarray_umath import ( 93s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 93s 93s During handling of the above exception, another exception occurred: 93s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 93s from numpy.__config__ import show as show_config 93s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 93s from numpy.core._multiarray_umath import ( 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 93s raise ImportError(msg) 93s E ImportError: 93s E 93s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 93s E 93s E Importing the numpy C-extensions failed. This error can happen for 93s E many reasons, often due to issues with your setup or how NumPy was 93s E installed. 93s E 93s E We have compiled some common reasons and troubleshooting tips at: 93s E 93s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 93s E 93s E Please note and check the following: 93s E 93s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 93s E * The NumPy version is: "1.26.4" 93s E 93s E and make sure that they are the versions you expect. 93s E Please carefully study the documentation linked above for further help. 93s E 93s E Original error was: No module named 'numpy.core._multiarray_umath' 93s 93s The above exception was the direct cause of the following exception: 93s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 93s return _bootstrap._gcd_import(name[level:], package, level) 93s tests/__init__.py:5: in 93s from weblogo.utils import resource_filename, resource_stream, resource_string 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 93s from .logo import * # noqa: F401, F403 93s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 93s import numpy as np 93s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 93s raise ImportError(msg) from e 93s E ImportError: Error importing numpy: you should not try to import numpy from 93s E its source directory; please exit the numpy source tree, and relaunch 93s E your python interpreter from there. 93s ___________________ ERROR collecting tests/test_nexus_io.py ____________________ 93s ImportError while importing test module '/tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build/tests/test_nexus_io.py'. 93s Hint: make sure your test modules/packages have valid Python names. 93s Traceback: 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 93s from . import multiarray 93s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 93s from . import overrides 93s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 93s from numpy.core._multiarray_umath import ( 93s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 93s 93s During handling of the above exception, another exception occurred: 93s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 93s from numpy.__config__ import show as show_config 93s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 93s from numpy.core._multiarray_umath import ( 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 93s raise ImportError(msg) 93s E ImportError: 93s E 93s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 93s E 93s E Importing the numpy C-extensions failed. This error can happen for 93s E many reasons, often due to issues with your setup or how NumPy was 93s E installed. 93s E 93s E We have compiled some common reasons and troubleshooting tips at: 93s E 93s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 93s E 93s E Please note and check the following: 93s E 93s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 93s E * The NumPy version is: "1.26.4" 93s E 93s E and make sure that they are the versions you expect. 93s E Please carefully study the documentation linked above for further help. 93s E 93s E Original error was: No module named 'numpy.core._multiarray_umath' 93s 93s The above exception was the direct cause of the following exception: 93s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 93s return _bootstrap._gcd_import(name[level:], package, level) 93s tests/__init__.py:5: in 93s from weblogo.utils import resource_filename, resource_stream, resource_string 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 93s from .logo import * # noqa: F401, F403 93s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 93s import numpy as np 93s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 93s raise ImportError(msg) from e 93s E ImportError: Error importing numpy: you should not try to import numpy from 93s E its source directory; please exit the numpy source tree, and relaunch 93s E your python interpreter from there. 93s ____________________ ERROR collecting tests/test_null_io.py ____________________ 93s ImportError while importing test module '/tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build/tests/test_null_io.py'. 93s Hint: make sure your test modules/packages have valid Python names. 93s Traceback: 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 93s from . import multiarray 93s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 93s from . import overrides 93s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 93s from numpy.core._multiarray_umath import ( 93s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 93s 93s During handling of the above exception, another exception occurred: 93s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 93s from numpy.__config__ import show as show_config 93s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 93s from numpy.core._multiarray_umath import ( 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 93s raise ImportError(msg) 93s E ImportError: 93s E 93s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 93s E 93s E Importing the numpy C-extensions failed. This error can happen for 93s E many reasons, often due to issues with your setup or how NumPy was 93s E installed. 93s E 93s E We have compiled some common reasons and troubleshooting tips at: 93s E 93s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 93s E 93s E Please note and check the following: 93s E 93s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 93s E * The NumPy version is: "1.26.4" 93s E 93s E and make sure that they are the versions you expect. 93s E Please carefully study the documentation linked above for further help. 93s E 93s E Original error was: No module named 'numpy.core._multiarray_umath' 93s 93s The above exception was the direct cause of the following exception: 93s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 93s return _bootstrap._gcd_import(name[level:], package, level) 93s tests/__init__.py:5: in 93s from weblogo.utils import resource_filename, resource_stream, resource_string 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 93s from .logo import * # noqa: F401, F403 93s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 93s import numpy as np 93s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 93s raise ImportError(msg) from e 93s E ImportError: Error importing numpy: you should not try to import numpy from 93s E its source directory; please exit the numpy source tree, and relaunch 93s E your python interpreter from there. 93s ___________________ ERROR collecting tests/test_phylip_io.py ___________________ 93s ImportError while importing test module '/tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build/tests/test_phylip_io.py'. 93s Hint: make sure your test modules/packages have valid Python names. 93s Traceback: 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 93s from . import multiarray 93s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 93s from . import overrides 93s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 93s from numpy.core._multiarray_umath import ( 93s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 93s 93s During handling of the above exception, another exception occurred: 93s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 93s from numpy.__config__ import show as show_config 93s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 93s from numpy.core._multiarray_umath import ( 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 93s raise ImportError(msg) 93s E ImportError: 93s E 93s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 93s E 93s E Importing the numpy C-extensions failed. This error can happen for 93s E many reasons, often due to issues with your setup or how NumPy was 93s E installed. 93s E 93s E We have compiled some common reasons and troubleshooting tips at: 93s E 93s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 93s E 93s E Please note and check the following: 93s E 93s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 93s E * The NumPy version is: "1.26.4" 93s E 93s E and make sure that they are the versions you expect. 93s E Please carefully study the documentation linked above for further help. 93s E 93s E Original error was: No module named 'numpy.core._multiarray_umath' 93s 93s The above exception was the direct cause of the following exception: 93s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 93s return _bootstrap._gcd_import(name[level:], package, level) 93s tests/__init__.py:5: in 93s from weblogo.utils import resource_filename, resource_stream, resource_string 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 93s from .logo import * # noqa: F401, F403 93s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 93s import numpy as np 93s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 93s raise ImportError(msg) from e 93s E ImportError: Error importing numpy: you should not try to import numpy from 93s E its source directory; please exit the numpy source tree, and relaunch 93s E your python interpreter from there. 93s ___________________ ERROR collecting tests/test_plain_io.py ____________________ 93s ImportError while importing test module '/tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build/tests/test_plain_io.py'. 93s Hint: make sure your test modules/packages have valid Python names. 93s Traceback: 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 93s from . import multiarray 93s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 93s from . import overrides 93s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 93s from numpy.core._multiarray_umath import ( 93s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 93s 93s During handling of the above exception, another exception occurred: 93s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 93s from numpy.__config__ import show as show_config 93s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 93s from numpy.core._multiarray_umath import ( 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 93s raise ImportError(msg) 93s E ImportError: 93s E 93s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 93s E 93s E Importing the numpy C-extensions failed. This error can happen for 93s E many reasons, often due to issues with your setup or how NumPy was 93s E installed. 93s E 93s E We have compiled some common reasons and troubleshooting tips at: 93s E 93s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 93s E 93s E Please note and check the following: 93s E 93s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 93s E * The NumPy version is: "1.26.4" 93s E 93s E and make sure that they are the versions you expect. 93s E Please carefully study the documentation linked above for further help. 93s E 93s E Original error was: No module named 'numpy.core._multiarray_umath' 93s 93s The above exception was the direct cause of the following exception: 93s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 93s return _bootstrap._gcd_import(name[level:], package, level) 93s tests/__init__.py:5: in 93s from weblogo.utils import resource_filename, resource_stream, resource_string 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 93s from .logo import * # noqa: F401, F403 93s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 93s import numpy as np 93s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 93s raise ImportError(msg) from e 93s E ImportError: Error importing numpy: you should not try to import numpy from 93s E its source directory; please exit the numpy source tree, and relaunch 93s E your python interpreter from there. 93s ______________________ ERROR collecting tests/test_seq.py ______________________ 93s ImportError while importing test module '/tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build/tests/test_seq.py'. 93s Hint: make sure your test modules/packages have valid Python names. 93s Traceback: 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 93s from . import multiarray 93s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 93s from . import overrides 93s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 93s from numpy.core._multiarray_umath import ( 93s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 93s 93s During handling of the above exception, another exception occurred: 93s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 93s from numpy.__config__ import show as show_config 93s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 93s from numpy.core._multiarray_umath import ( 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 93s raise ImportError(msg) 93s E ImportError: 93s E 93s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 93s E 93s E Importing the numpy C-extensions failed. This error can happen for 93s E many reasons, often due to issues with your setup or how NumPy was 93s E installed. 93s E 93s E We have compiled some common reasons and troubleshooting tips at: 93s E 93s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 93s E 93s E Please note and check the following: 93s E 93s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 93s E * The NumPy version is: "1.26.4" 93s E 93s E and make sure that they are the versions you expect. 93s E Please carefully study the documentation linked above for further help. 93s E 93s E Original error was: No module named 'numpy.core._multiarray_umath' 93s 93s The above exception was the direct cause of the following exception: 93s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 93s return _bootstrap._gcd_import(name[level:], package, level) 93s tests/__init__.py:5: in 93s from weblogo.utils import resource_filename, resource_stream, resource_string 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 93s from .logo import * # noqa: F401, F403 93s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 93s import numpy as np 93s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 93s raise ImportError(msg) from e 93s E ImportError: Error importing numpy: you should not try to import numpy from 93s E its source directory; please exit the numpy source tree, and relaunch 93s E your python interpreter from there. 93s ____________________ ERROR collecting tests/test_seq_io.py _____________________ 93s ImportError while importing test module '/tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build/tests/test_seq_io.py'. 93s Hint: make sure your test modules/packages have valid Python names. 93s Traceback: 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 93s from . import multiarray 93s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 93s from . import overrides 93s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 93s from numpy.core._multiarray_umath import ( 93s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 93s 93s During handling of the above exception, another exception occurred: 93s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 93s from numpy.__config__ import show as show_config 93s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 93s from numpy.core._multiarray_umath import ( 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 93s raise ImportError(msg) 93s E ImportError: 93s E 93s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 93s E 93s E Importing the numpy C-extensions failed. This error can happen for 93s E many reasons, often due to issues with your setup or how NumPy was 93s E installed. 93s E 93s E We have compiled some common reasons and troubleshooting tips at: 93s E 93s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 93s E 93s E Please note and check the following: 93s E 93s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 93s E * The NumPy version is: "1.26.4" 93s E 93s E and make sure that they are the versions you expect. 93s E Please carefully study the documentation linked above for further help. 93s E 93s E Original error was: No module named 'numpy.core._multiarray_umath' 93s 93s The above exception was the direct cause of the following exception: 93s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 93s return _bootstrap._gcd_import(name[level:], package, level) 93s tests/__init__.py:5: in 93s from weblogo.utils import resource_filename, resource_stream, resource_string 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 93s from .logo import * # noqa: F401, F403 93s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 93s import numpy as np 93s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 93s raise ImportError(msg) from e 93s E ImportError: Error importing numpy: you should not try to import numpy from 93s E its source directory; please exit the numpy source tree, and relaunch 93s E your python interpreter from there. 93s _________________ ERROR collecting tests/test_stockholm_io.py __________________ 93s ImportError while importing test module '/tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build/tests/test_stockholm_io.py'. 93s Hint: make sure your test modules/packages have valid Python names. 93s Traceback: 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 93s from . import multiarray 93s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 93s from . import overrides 93s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 93s from numpy.core._multiarray_umath import ( 93s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 93s 93s During handling of the above exception, another exception occurred: 93s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 93s from numpy.__config__ import show as show_config 93s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 93s from numpy.core._multiarray_umath import ( 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 93s raise ImportError(msg) 93s E ImportError: 93s E 93s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 93s E 93s E Importing the numpy C-extensions failed. This error can happen for 93s E many reasons, often due to issues with your setup or how NumPy was 93s E installed. 93s E 93s E We have compiled some common reasons and troubleshooting tips at: 93s E 93s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 93s E 93s E Please note and check the following: 93s E 93s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 93s E * The NumPy version is: "1.26.4" 93s E 93s E and make sure that they are the versions you expect. 93s E Please carefully study the documentation linked above for further help. 93s E 93s E Original error was: No module named 'numpy.core._multiarray_umath' 93s 93s The above exception was the direct cause of the following exception: 93s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 93s return _bootstrap._gcd_import(name[level:], package, level) 93s tests/__init__.py:5: in 93s from weblogo.utils import resource_filename, resource_stream, resource_string 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 93s from .logo import * # noqa: F401, F403 93s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 93s import numpy as np 93s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 93s raise ImportError(msg) from e 93s E ImportError: Error importing numpy: you should not try to import numpy from 93s E its source directory; please exit the numpy source tree, and relaunch 93s E your python interpreter from there. 93s ___________________ ERROR collecting tests/test_table_io.py ____________________ 93s ImportError while importing test module '/tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build/tests/test_table_io.py'. 93s Hint: make sure your test modules/packages have valid Python names. 93s Traceback: 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 93s from . import multiarray 93s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 93s from . import overrides 93s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 93s from numpy.core._multiarray_umath import ( 93s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 93s 93s During handling of the above exception, another exception occurred: 93s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 93s from numpy.__config__ import show as show_config 93s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 93s from numpy.core._multiarray_umath import ( 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 93s raise ImportError(msg) 93s E ImportError: 93s E 93s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 93s E 93s E Importing the numpy C-extensions failed. This error can happen for 93s E many reasons, often due to issues with your setup or how NumPy was 93s E installed. 93s E 93s E We have compiled some common reasons and troubleshooting tips at: 93s E 93s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 93s E 93s E Please note and check the following: 93s E 93s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 93s E * The NumPy version is: "1.26.4" 93s E 93s E and make sure that they are the versions you expect. 93s E Please carefully study the documentation linked above for further help. 93s E 93s E Original error was: No module named 'numpy.core._multiarray_umath' 93s 93s The above exception was the direct cause of the following exception: 93s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 93s return _bootstrap._gcd_import(name[level:], package, level) 93s tests/__init__.py:5: in 93s from weblogo.utils import resource_filename, resource_stream, resource_string 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 93s from .logo import * # noqa: F401, F403 93s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 93s import numpy as np 93s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 93s raise ImportError(msg) from e 93s E ImportError: Error importing numpy: you should not try to import numpy from 93s E its source directory; please exit the numpy source tree, and relaunch 93s E your python interpreter from there. 93s ___________________ ERROR collecting tests/test_transform.py ___________________ 93s ImportError while importing test module '/tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build/tests/test_transform.py'. 93s Hint: make sure your test modules/packages have valid Python names. 93s Traceback: 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 93s from . import multiarray 93s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 93s from . import overrides 93s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 93s from numpy.core._multiarray_umath import ( 93s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 93s 93s During handling of the above exception, another exception occurred: 93s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 93s from numpy.__config__ import show as show_config 93s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 93s from numpy.core._multiarray_umath import ( 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 93s raise ImportError(msg) 93s E ImportError: 93s E 93s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 93s E 93s E Importing the numpy C-extensions failed. This error can happen for 93s E many reasons, often due to issues with your setup or how NumPy was 93s E installed. 93s E 93s E We have compiled some common reasons and troubleshooting tips at: 93s E 93s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 93s E 93s E Please note and check the following: 93s E 93s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 93s E * The NumPy version is: "1.26.4" 93s E 93s E and make sure that they are the versions you expect. 93s E Please carefully study the documentation linked above for further help. 93s E 93s E Original error was: No module named 'numpy.core._multiarray_umath' 93s 93s The above exception was the direct cause of the following exception: 93s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 93s return _bootstrap._gcd_import(name[level:], package, level) 93s tests/__init__.py:5: in 93s from weblogo.utils import resource_filename, resource_stream, resource_string 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 93s from .logo import * # noqa: F401, F403 93s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 93s import numpy as np 93s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 93s raise ImportError(msg) from e 93s E ImportError: Error importing numpy: you should not try to import numpy from 93s E its source directory; please exit the numpy source tree, and relaunch 93s E your python interpreter from there. 93s _________________ ERROR collecting tests/test_transformseq.py __________________ 93s ImportError while importing test module '/tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build/tests/test_transformseq.py'. 93s Hint: make sure your test modules/packages have valid Python names. 93s Traceback: 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 93s from . import multiarray 93s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 93s from . import overrides 93s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 93s from numpy.core._multiarray_umath import ( 93s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 93s 93s During handling of the above exception, another exception occurred: 93s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 93s from numpy.__config__ import show as show_config 93s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 93s from numpy.core._multiarray_umath import ( 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 93s raise ImportError(msg) 93s E ImportError: 93s E 93s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 93s E 93s E Importing the numpy C-extensions failed. This error can happen for 93s E many reasons, often due to issues with your setup or how NumPy was 93s E installed. 93s E 93s E We have compiled some common reasons and troubleshooting tips at: 93s E 93s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 93s E 93s E Please note and check the following: 93s E 93s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 93s E * The NumPy version is: "1.26.4" 93s E 93s E and make sure that they are the versions you expect. 93s E Please carefully study the documentation linked above for further help. 93s E 93s E Original error was: No module named 'numpy.core._multiarray_umath' 93s 93s The above exception was the direct cause of the following exception: 93s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 93s return _bootstrap._gcd_import(name[level:], package, level) 93s tests/__init__.py:5: in 93s from weblogo.utils import resource_filename, resource_stream, resource_string 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 93s from .logo import * # noqa: F401, F403 93s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 93s import numpy as np 93s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 93s raise ImportError(msg) from e 93s E ImportError: Error importing numpy: you should not try to import numpy from 93s E its source directory; please exit the numpy source tree, and relaunch 93s E your python interpreter from there. 93s _____________________ ERROR collecting tests/test_utils.py _____________________ 93s ImportError while importing test module '/tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build/tests/test_utils.py'. 93s Hint: make sure your test modules/packages have valid Python names. 93s Traceback: 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 93s from . import multiarray 93s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 93s from . import overrides 93s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 93s from numpy.core._multiarray_umath import ( 93s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 93s 93s During handling of the above exception, another exception occurred: 93s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 93s from numpy.__config__ import show as show_config 93s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 93s from numpy.core._multiarray_umath import ( 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 93s raise ImportError(msg) 93s E ImportError: 93s E 93s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 93s E 93s E Importing the numpy C-extensions failed. This error can happen for 93s E many reasons, often due to issues with your setup or how NumPy was 93s E installed. 93s E 93s E We have compiled some common reasons and troubleshooting tips at: 93s E 93s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 93s E 93s E Please note and check the following: 93s E 93s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 93s E * The NumPy version is: "1.26.4" 93s E 93s E and make sure that they are the versions you expect. 93s E Please carefully study the documentation linked above for further help. 93s E 93s E Original error was: No module named 'numpy.core._multiarray_umath' 93s 93s The above exception was the direct cause of the following exception: 93s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 93s return _bootstrap._gcd_import(name[level:], package, level) 93s tests/__init__.py:5: in 93s from weblogo.utils import resource_filename, resource_stream, resource_string 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 93s from .logo import * # noqa: F401, F403 93s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 93s import numpy as np 93s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 93s raise ImportError(msg) from e 93s E ImportError: Error importing numpy: you should not try to import numpy from 93s E its source directory; please exit the numpy source tree, and relaunch 93s E your python interpreter from there. 93s ____________________ ERROR collecting tests/test_weblogo.py ____________________ 93s ImportError while importing test module '/tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build/tests/test_weblogo.py'. 93s Hint: make sure your test modules/packages have valid Python names. 93s Traceback: 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 93s from . import multiarray 93s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 93s from . import overrides 93s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 93s from numpy.core._multiarray_umath import ( 93s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 93s 93s During handling of the above exception, another exception occurred: 93s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 93s from numpy.__config__ import show as show_config 93s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 93s from numpy.core._multiarray_umath import ( 93s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 93s raise ImportError(msg) 93s E ImportError: 93s E 93s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 93s E 93s E Importing the numpy C-extensions failed. This error can happen for 93s E many reasons, often due to issues with your setup or how NumPy was 93s E installed. 93s E 93s E We have compiled some common reasons and troubleshooting tips at: 93s E 93s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 93s E 93s E Please note and check the following: 93s E 93s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 93s E * The NumPy version is: "1.26.4" 93s E 93s E and make sure that they are the versions you expect. 93s E Please carefully study the documentation linked above for further help. 93s E 93s E Original error was: No module named 'numpy.core._multiarray_umath' 93s 93s The above exception was the direct cause of the following exception: 93s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 93s return _bootstrap._gcd_import(name[level:], package, level) 93s tests/__init__.py:5: in 93s from weblogo.utils import resource_filename, resource_stream, resource_string 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:9: in 93s from .logo import * # noqa: F401, F403 93s /usr/lib/python3/dist-packages/weblogo/logo.py:51: in 93s import numpy as np 93s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 93s raise ImportError(msg) from e 93s E ImportError: Error importing numpy: you should not try to import numpy from 93s E its source directory; please exit the numpy source tree, and relaunch 93s E your python interpreter from there. 93s =============================== warnings summary =============================== 93s ../../../../usr/lib/python3/dist-packages/weblogo/__init__.py:1 93s /usr/lib/python3/dist-packages/weblogo/__init__.py:1: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html 93s from pkg_resources import DistributionNotFound, get_distribution 93s 93s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 93s =========================== short test summary info ============================ 93s ERROR tests/test_array_io.py 93s ERROR tests/test_cli.py 93s ERROR tests/test_clustal_io.py 93s ERROR tests/test_data.py 93s ERROR tests/test_fasta_io.py 93s ERROR tests/test_genbank_io.py 93s ERROR tests/test_intelligenetics_io.py 93s ERROR tests/test_matrix.py 93s ERROR tests/test_msf_io.py 93s ERROR tests/test_nbrf_io.py 93s ERROR tests/test_nexus.py 93s ERROR tests/test_nexus_io.py 93s ERROR tests/test_null_io.py 93s ERROR tests/test_phylip_io.py 93s ERROR tests/test_plain_io.py 93s ERROR tests/test_seq.py 93s ERROR tests/test_seq_io.py 93s ERROR tests/test_stockholm_io.py 93s ERROR tests/test_table_io.py 93s ERROR tests/test_transform.py 93s ERROR tests/test_transformseq.py 93s ERROR tests/test_utils.py 93s ERROR tests/test_weblogo.py 93s !!!!!!!!!!!!!!!!!!! Interrupted: 23 errors during collection !!!!!!!!!!!!!!!!!!! 93s ======================== 1 warning, 23 errors in 0.79s ========================= 93s E: pybuild pybuild:389: test: plugin distutils failed with: exit code=2: cd /tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build; python3.13 -m pytest -k 'not test_transformseq and not test_cli and not test_resources' 93s I: pybuild base:311: cd /tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build; python3.12 -m pytest -k 'not test_transformseq and not test_cli and not test_resources' 94s ============================= test session starts ============================== 94s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 94s rootdir: /tmp/autopkgtest.Okbg6t/autopkgtest_tmp/build 94s plugins: typeguard-4.4.1 94s collected 245 items / 21 deselected / 224 selected 94s 94s tests/test_array_io.py .... [ 1%] 94s tests/test_clustal_io.py ............. [ 7%] 94s tests/test_data.py . [ 8%] 94s tests/test_fasta_io.py ............. [ 13%] 94s tests/test_genbank_io.py .. [ 14%] 94s tests/test_intelligenetics_io.py ..... [ 16%] 94s tests/test_matrix.py ....... [ 20%] 94s tests/test_msf_io.py ........ [ 23%] 94s tests/test_nbrf_io.py ......... [ 27%] 94s tests/test_nexus.py ..... [ 29%] 94s tests/test_nexus_io.py ....... [ 33%] 94s tests/test_null_io.py ... [ 34%] 94s tests/test_phylip_io.py ........... [ 39%] 94s tests/test_plain_io.py ... [ 40%] 94s tests/test_seq.py .............................................. [ 61%] 94s tests/test_seq_io.py ............ [ 66%] 94s tests/test_stockholm_io.py ......... [ 70%] 94s tests/test_table_io.py ... [ 71%] 94s tests/test_transform.py ........ [ 75%] 94s tests/test_utils.py ........... [ 80%] 98s tests/test_weblogo.py ............................................ [100%] 98s 98s =============================== warnings summary =============================== 98s ../../../../usr/lib/python3/dist-packages/weblogo/__init__.py:1 98s /usr/lib/python3/dist-packages/weblogo/__init__.py:1: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html 98s from pkg_resources import DistributionNotFound, get_distribution 98s 98s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 98s ================ 224 passed, 21 deselected, 1 warning in 4.62s ================= 98s pybuild-autopkgtest: error: pybuild --autopkgtest --test-pytest -i python{version} -p "3.13 3.12" returned exit code 13 98s make: *** [/tmp/NIenx37bAK/run:4: pybuild-autopkgtest] Error 25 98s pybuild-autopkgtest: error: /tmp/NIenx37bAK/run pybuild-autopkgtest returned exit code 2 98s autopkgtest [21:45:09]: test pybuild-autopkgtest: -----------------------] 99s pybuild-autopkgtest FAIL non-zero exit status 25 99s autopkgtest [21:45:10]: test pybuild-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 99s autopkgtest [21:45:10]: @@@@@@@@@@@@@@@@@@@@ summary 99s pybuild-autopkgtest FAIL non-zero exit status 25 110s nova [W] Skipping flock for amd64 110s Creating nova instance adt-plucky-amd64-python-weblogo-20241114-214331-juju-7f2275-prod-proposed-migration-environment-20-8eebd01e-1244-4c6f-bb42-9899b588e7d3 from image adt/ubuntu-plucky-amd64-server-20241114.img (UUID 79d80331-8736-463c-82c6-8c9e13c0a4ca)...