0s autopkgtest [09:30:10]: starting date and time: 2025-01-17 09:30:10+0000 0s autopkgtest [09:30:10]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [09:30:10]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.q3o3_yqn/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults --apt-upgrade python-rioxarray --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.13.1-1~exp2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-23.secgroup --name adt-plucky-amd64-python-rioxarray-20250117-093010-juju-7f2275-prod-proposed-migration-environment-15-f742bbbb-6e72-4e85-b55a-904c55510d6f --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 136s autopkgtest [09:32:26]: testbed dpkg architecture: amd64 136s autopkgtest [09:32:26]: testbed apt version: 2.9.18 137s autopkgtest [09:32:27]: @@@@@@@@@@@@@@@@@@@@ test bed setup 137s autopkgtest [09:32:27]: testbed release detected to be: None 138s autopkgtest [09:32:28]: updating testbed package index (apt update) 138s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 138s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 138s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 138s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 138s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [16.0 kB] 138s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [886 kB] 139s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 139s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [171 kB] 139s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [223 kB] 139s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [327 kB] 139s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [40.1 kB] 139s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/restricted i386 Packages [2408 B] 139s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [1080 kB] 139s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [461 kB] 139s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [7684 B] 139s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [27.1 kB] 139s Fetched 3326 kB in 1s (2226 kB/s) 140s Reading package lists... 141s Reading package lists... 141s Building dependency tree... 141s Reading state information... 141s Calculating upgrade... 141s The following packages will be upgraded: 141s libgudev-1.0-0 usb.ids 141s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 141s Need to get 239 kB of archives. 141s After this operation, 0 B of additional disk space will be used. 141s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 usb.ids all 2025.01.14-1 [223 kB] 142s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libgudev-1.0-0 amd64 1:238-6 [15.8 kB] 142s Fetched 239 kB in 0s (506 kB/s) 142s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75824 files and directories currently installed.) 142s Preparing to unpack .../usb.ids_2025.01.14-1_all.deb ... 142s Unpacking usb.ids (2025.01.14-1) over (2024.12.04-1) ... 142s Preparing to unpack .../libgudev-1.0-0_1%3a238-6_amd64.deb ... 142s Unpacking libgudev-1.0-0:amd64 (1:238-6) over (1:238-5ubuntu1) ... 142s Setting up usb.ids (2025.01.14-1) ... 142s Setting up libgudev-1.0-0:amd64 (1:238-6) ... 142s Processing triggers for libc-bin (2.40-4ubuntu1) ... 142s Reading package lists... 142s Building dependency tree... 142s Reading state information... 143s 0 upgraded, 0 newly installed, 0 to remove and 3 not upgraded. 143s autopkgtest [09:32:33]: upgrading testbed (apt dist-upgrade and autopurge) 143s Reading package lists... 143s Building dependency tree... 143s Reading state information... 143s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 143s Starting 2 pkgProblemResolver with broken count: 0 143s Done 144s Entering ResolveByKeep 144s 144s The following packages were automatically installed and are no longer required: 144s python3.12 python3.12-minimal 144s Use 'sudo apt autoremove' to remove them. 144s The following NEW packages will be installed: 144s libpython3.13-minimal libpython3.13-stdlib python3.13 python3.13-minimal 144s The following packages will be upgraded: 144s libpython3-stdlib python3 python3-minimal 144s 3 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. 144s Need to get 6118 kB of archives. 144s After this operation, 22.7 MB of additional disk space will be used. 144s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.1-2 [881 kB] 145s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.1-2 [2358 kB] 145s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-minimal amd64 3.13.1-1~exp2 [27.6 kB] 145s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3 amd64 3.13.1-1~exp2 [23.9 kB] 145s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.1-2 [2088 kB] 145s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.1-2 [729 kB] 146s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpython3-stdlib amd64 3.13.1-1~exp2 [10.2 kB] 146s Fetched 6118 kB in 2s (3561 kB/s) 146s Selecting previously unselected package libpython3.13-minimal:amd64. 146s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75824 files and directories currently installed.) 146s Preparing to unpack .../libpython3.13-minimal_3.13.1-2_amd64.deb ... 146s Unpacking libpython3.13-minimal:amd64 (3.13.1-2) ... 146s Selecting previously unselected package python3.13-minimal. 146s Preparing to unpack .../python3.13-minimal_3.13.1-2_amd64.deb ... 146s Unpacking python3.13-minimal (3.13.1-2) ... 146s Setting up libpython3.13-minimal:amd64 (3.13.1-2) ... 146s Setting up python3.13-minimal (3.13.1-2) ... 147s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76144 files and directories currently installed.) 147s Preparing to unpack .../python3-minimal_3.13.1-1~exp2_amd64.deb ... 147s Unpacking python3-minimal (3.13.1-1~exp2) over (3.12.8-1) ... 147s Setting up python3-minimal (3.13.1-1~exp2) ... 147s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76144 files and directories currently installed.) 147s Preparing to unpack .../python3_3.13.1-1~exp2_amd64.deb ... 147s Unpacking python3 (3.13.1-1~exp2) over (3.12.8-1) ... 147s Selecting previously unselected package libpython3.13-stdlib:amd64. 147s Preparing to unpack .../libpython3.13-stdlib_3.13.1-2_amd64.deb ... 147s Unpacking libpython3.13-stdlib:amd64 (3.13.1-2) ... 147s Selecting previously unselected package python3.13. 147s Preparing to unpack .../python3.13_3.13.1-2_amd64.deb ... 147s Unpacking python3.13 (3.13.1-2) ... 147s Preparing to unpack .../libpython3-stdlib_3.13.1-1~exp2_amd64.deb ... 147s Unpacking libpython3-stdlib:amd64 (3.13.1-1~exp2) over (3.12.8-1) ... 147s Setting up libpython3.13-stdlib:amd64 (3.13.1-2) ... 147s Setting up libpython3-stdlib:amd64 (3.13.1-1~exp2) ... 147s Setting up python3.13 (3.13.1-2) ... 148s Setting up python3 (3.13.1-1~exp2) ... 148s /usr/bin/py3clean:101: DeprecationWarning: glob.glob1 is deprecated and will be removed in Python 3.15. Use glob.glob and pass a directory to its root_dir argument instead. 148s for fn in glob1(directory, "%s.*" % fname): 148s Processing triggers for man-db (2.13.0-1) ... 148s Processing triggers for systemd (257-2ubuntu1) ... 149s Reading package lists... 149s Building dependency tree... 149s Reading state information... 149s Starting pkgProblemResolver with broken count: 0 149s Starting 2 pkgProblemResolver with broken count: 0 149s Done 150s The following packages will be REMOVED: 150s python3.12* python3.12-minimal* 150s 0 upgraded, 0 newly installed, 2 to remove and 0 not upgraded. 150s After this operation, 8926 kB disk space will be freed. 150s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76561 files and directories currently installed.) 150s Removing python3.12 (3.12.8-3) ... 150s Removing python3.12-minimal (3.12.8-3) ... 150s /usr/bin/py3clean:125: DeprecationWarning: glob.glob1 is deprecated and will be removed in Python 3.15. Use glob.glob and pass a directory to its root_dir argument instead. 150s for fn in glob1(directory, "%s.%s.py[co]" % (fname, magic_tag)): 151s Processing triggers for man-db (2.13.0-1) ... 151s Processing triggers for systemd (257-2ubuntu1) ... 151s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76533 files and directories currently installed.) 151s Purging configuration files for python3.12-minimal (3.12.8-3) ... 154s autopkgtest [09:32:44]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 13:41:20 UTC 2024 154s autopkgtest [09:32:44]: @@@@@@@@@@@@@@@@@@@@ apt-source python-rioxarray 156s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-rioxarray 0.18.1-2 (dsc) [2502 B] 156s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-rioxarray 0.18.1-2 (tar) [4573 kB] 156s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-rioxarray 0.18.1-2 (diff) [4144 B] 156s gpgv: Signature made Tue Dec 3 22:53:42 2024 UTC 156s gpgv: using RSA key 3B70F209A5FFD68903C472C5EBF48AB2578F9812 156s gpgv: issuer "antonio.valentino@tiscali.it" 156s gpgv: Can't check signature: No public key 156s dpkg-source: warning: cannot verify inline signature for ./python-rioxarray_0.18.1-2.dsc: no acceptable signature found 156s autopkgtest [09:32:46]: testing package python-rioxarray version 0.18.1-2 157s autopkgtest [09:32:47]: build not needed 157s autopkgtest [09:32:47]: test pybuild-autopkgtest: preparing testbed 158s Reading package lists... 158s Building dependency tree... 158s Reading state information... 158s Starting pkgProblemResolver with broken count: 0 158s Starting 2 pkgProblemResolver with broken count: 0 158s Done 159s The following NEW packages will be installed: 159s autoconf automake autopoint autotools-dev build-essential cpp cpp-14 159s cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu debhelper debugedit 159s dh-autoreconf dh-python dh-strip-nondeterminism dwz fontconfig-config 159s fonts-dejavu-core fonts-dejavu-mono g++ g++-14 g++-14-x86-64-linux-gnu 159s g++-x86-64-linux-gnu gcc gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu 159s gdal-data gdal-plugins gettext intltool-debian libabsl20230802 libaec0 159s libaom3 libarchive-zip-perl libarmadillo14 libarpack2t64 libasan8 libavif16 159s libblas3 libblosc1 libcc1-0 libcfitsio10t64 libdav1d7 libde265-0 159s libdebhelper-perl libdeflate0 libfile-stripnondeterminism-perl 159s libfontconfig1 libfreexl1 libfyba0t64 libgav1-1 libgcc-14-dev libgdal36 159s libgeos-c1t64 libgeos3.13.0 libgeotiff5 libgfortran5 libgif7 libgomp1 159s libgpgmepp6t64 libhdf4-0-alt libhdf5-103-1t64 libhdf5-hl-100t64 159s libheif-plugin-aomdec libheif-plugin-libde265 libheif1 libhwasan0 libisl23 159s libitm1 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-hotkeys 159s libjs-jquery-isonscreen libjs-jquery-metadata libjs-jquery-tablesorter 159s libjs-jquery-throttle-debounce libkmlbase1t64 libkmldom1t64 libkmlengine1t64 159s liblapack3 liblbfgsb0 liblcms2-2 liblerc4 liblsan0 libltdl7 libminizip1t64 159s libmpc3 libmysqlclient24 libnetcdf19t64 libodbc2 libodbcinst2 libogdi4.1 159s libopenjp2-7 libpoppler140 libpq5 libproj25 libqhull-r8.0 libquadmath0 159s librav1e0.7 librttopo1 libsharpyuv0 libsnappy1v5 libspatialite8t64 159s libstdc++-14-dev libsvtav1enc2 libsz2 libtiff6 libtool libtsan2 libubsan1 159s liburiparser1 libwebp7 libxerces-c3.2t64 libyuv0 m4 mysql-common po-debconf 159s proj-data pybuild-plugin-autopkgtest pybuild-plugin-pyproject python3-affine 159s python3-all python3-build python3-cftime python3-click python3-click-plugins 159s python3-cligj python3-cloudpickle python3-coverage python3-dask 159s python3-dateutil python3-decorator python3-fsspec python3-iniconfig 159s python3-installer python3-locket python3-netcdf4 python3-numpy 159s python3-packaging python3-pandas python3-pandas-lib python3-partd 159s python3-pluggy python3-pyproj python3-pyproject-hooks python3-pytest 159s python3-pytest-cov python3-pytest-timeout python3-rasterio python3-rioxarray 159s python3-scipy python3-toml python3-toolz python3-tz python3-wheel 159s python3-xarray python3.12 python3.12-minimal unixodbc-common 159s 0 upgraded, 161 newly installed, 0 to remove and 0 not upgraded. 159s Need to get 169 MB of archives. 159s After this operation, 680 MB of additional disk space will be used. 159s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12-minimal amd64 3.12.8-3 [2349 kB] 160s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 160s Get:3 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-hotkeys all 0~20130707+git2d51e3a9+dfsg-2.1 [11.5 kB] 160s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12 amd64 3.12.8-3 [667 kB] 160s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 m4 amd64 1.4.19-4build1 [244 kB] 160s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 autoconf all 2.72-3 [382 kB] 160s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 autotools-dev all 20220109.1 [44.9 kB] 160s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 automake all 1:1.16.5-1.3ubuntu1 [558 kB] 160s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 autopoint all 0.22.5-3 [616 kB] 160s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 160s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 160s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-12ubuntu1 [11.9 MB] 161s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-12ubuntu1 [1036 B] 161s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [5452 B] 161s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.1.0-2ubuntu1 [22.4 kB] 161s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 14.2.0-12ubuntu1 [47.6 kB] 161s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-12ubuntu1 [148 kB] 161s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 14.2.0-12ubuntu1 [28.9 kB] 161s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 14.2.0-12ubuntu1 [2998 kB] 161s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 14.2.0-12ubuntu1 [1317 kB] 161s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 14.2.0-12ubuntu1 [2732 kB] 162s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 14.2.0-12ubuntu1 [1177 kB] 162s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 14.2.0-12ubuntu1 [1634 kB] 162s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 14.2.0-12ubuntu1 [153 kB] 162s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-12ubuntu1 [2815 kB] 162s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-12ubuntu1 [23.3 MB] 163s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-12ubuntu1 [533 kB] 163s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1214 B] 163s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.1.0-2ubuntu1 [5000 B] 163s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-12ubuntu1 [2506 kB] 163s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-12ubuntu1 [13.3 MB] 163s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-12ubuntu1 [20.2 kB] 163s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [966 B] 163s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.1.0-2ubuntu1 [1100 B] 163s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 163s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebhelper-perl all 13.20ubuntu1 [94.2 kB] 163s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libtool all 2.4.7-8 [166 kB] 163s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 dh-autoreconf all 20 [16.1 kB] 163s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libarchive-zip-perl all 1.68-1 [90.2 kB] 163s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [20.1 kB] 163s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 dh-strip-nondeterminism all 1.14.0-1 [5058 B] 163s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 debugedit amd64 1:5.1-1 [46.9 kB] 163s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 dwz amd64 0.15-1build6 [115 kB] 163s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 gettext amd64 0.22.5-3 [1025 kB] 163s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 intltool-debian all 0.35.0+20060710.6 [23.2 kB] 163s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 po-debconf all 1.0.21+nmu1 [233 kB] 163s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 debhelper all 13.20ubuntu1 [893 kB] 163s Get:48 http://ftpmaster.internal/ubuntu plucky/universe amd64 dh-python all 6.20241217 [117 kB] 163s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 163s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 163s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB] 163s Get:52 http://ftpmaster.internal/ubuntu plucky/universe amd64 gdal-data all 3.10.0+dfsg-1 [269 kB] 163s Get:53 http://ftpmaster.internal/ubuntu plucky/universe amd64 gdal-plugins amd64 3.10.0+dfsg-1 [25.4 kB] 163s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libabsl20230802 amd64 20230802.1-4ubuntu2 [563 kB] 163s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 163s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libaom3 amd64 3.11.0-1 [2761 kB] 163s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-4 [332 kB] 163s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-12ubuntu1 [909 kB] 163s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-4 [3177 kB] 163s Get:60 http://ftpmaster.internal/ubuntu plucky/universe amd64 libarpack2t64 amd64 3.9.1-4 [120 kB] 163s Get:61 http://ftpmaster.internal/ubuntu plucky/universe amd64 libarmadillo14 amd64 1:14.2.1+dfsg-1 [105 kB] 163s Get:62 http://ftpmaster.internal/ubuntu plucky/universe amd64 libdav1d7 amd64 1.5.0-1 [732 kB] 163s Get:63 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgav1-1 amd64 0.19.0-3 [697 kB] 163s Get:64 http://ftpmaster.internal/ubuntu plucky/universe amd64 librav1e0.7 amd64 0.7.1-9 [1025 kB] 163s Get:65 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsvtav1enc2 amd64 2.3.0+dfsg-1 [2686 kB] 163s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 163s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 163s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libyuv0 amd64 0.0.1899.20250103-1 [352 kB] 163s Get:69 http://ftpmaster.internal/ubuntu plucky/universe amd64 libavif16 amd64 1.1.1-1ubuntu1 [113 kB] 163s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 libsnappy1v5 amd64 1.2.1-1 [30.4 kB] 163s Get:71 http://ftpmaster.internal/ubuntu plucky/universe amd64 libblosc1 amd64 1.21.5+ds-1build1 [36.2 kB] 163s Get:72 http://ftpmaster.internal/ubuntu plucky/universe amd64 libcfitsio10t64 amd64 4.5.0-5 [629 kB] 163s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libde265-0 amd64 1.0.15-1build4 [168 kB] 163s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.22-1 [64.5 kB] 164s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB] 164s Get:76 http://ftpmaster.internal/ubuntu plucky/universe amd64 libfyba0t64 amd64 4.1.1-11build1 [119 kB] 164s Get:77 http://ftpmaster.internal/ubuntu plucky/universe amd64 libminizip1t64 amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [22.9 kB] 164s Get:78 http://ftpmaster.internal/ubuntu plucky/universe amd64 libfreexl1 amd64 2.0.0-1build2 [41.7 kB] 164s Get:79 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeos3.13.0 amd64 3.13.0-1 [1017 kB] 164s Get:80 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeos-c1t64 amd64 3.13.0-1 [103 kB] 164s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 proj-data all 9.5.1-1 [7924 kB] 164s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 164s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 164s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [17.5 kB] 164s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.4.0-0.1 [231 kB] 164s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 164s Get:87 http://ftpmaster.internal/ubuntu plucky/universe amd64 libproj25 amd64 9.5.1-1 [1499 kB] 164s Get:88 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeotiff5 amd64 1.7.3-1 [63.0 kB] 164s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libgif7 amd64 5.2.2-1ubuntu1 [35.2 kB] 164s Get:90 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 164s Get:91 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf4-0-alt amd64 4.3.0-1 [285 kB] 164s Get:92 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-103-1t64 amd64 1.10.10+repack-5ubuntu1 [1367 kB] 164s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif-plugin-aomdec amd64 1.19.3-1 [11.5 kB] 164s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif-plugin-libde265 amd64 1.19.3-1 [8968 B] 164s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif1 amd64 1.19.3-1 [415 kB] 164s Get:96 http://ftpmaster.internal/ubuntu plucky/universe amd64 liburiparser1 amd64 0.9.8+dfsg-2 [46.8 kB] 164s Get:97 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmlbase1t64 amd64 1.3.0-12build1 [49.9 kB] 164s Get:98 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmldom1t64 amd64 1.3.0-12build1 [156 kB] 164s Get:99 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmlengine1t64 amd64 1.3.0-12build1 [71.4 kB] 164s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 mysql-common all 5.8+1.1.1 [6800 B] 164s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 libmysqlclient24 amd64 8.4.3-0ubuntu1 [1255 kB] 164s Get:102 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-5ubuntu1 [59.5 kB] 164s Get:103 http://ftpmaster.internal/ubuntu plucky/universe amd64 libnetcdf19t64 amd64 1:4.9.2-6ubuntu1 [472 kB] 165s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl7 amd64 2.4.7-8 [43.9 kB] 165s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 libodbc2 amd64 2.3.12-1ubuntu1 [158 kB] 165s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 unixodbc-common all 2.3.12-1ubuntu1 [8796 B] 165s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libodbcinst2 amd64 2.3.12-1ubuntu1 [30.7 kB] 165s Get:108 http://ftpmaster.internal/ubuntu plucky/universe amd64 libogdi4.1 amd64 4.1.1+ds-5 [219 kB] 165s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 libopenjp2-7 amd64 2.5.0-2ubuntu2 [217 kB] 165s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 libgpgmepp6t64 amd64 1.24.1-2ubuntu1 [126 kB] 165s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 liblcms2-2 amd64 2.16-2 [212 kB] 165s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 libpoppler140 amd64 24.08.0-3 [1262 kB] 165s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libpq5 amd64 17.2-1 [153 kB] 165s Get:114 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqhull-r8.0 amd64 2020.2-6build1 [193 kB] 165s Get:115 http://ftpmaster.internal/ubuntu plucky/universe amd64 librttopo1 amd64 1.1.0-3build2 [191 kB] 165s Get:116 http://ftpmaster.internal/ubuntu plucky/universe amd64 libspatialite8t64 amd64 5.1.0-3build1 [1919 kB] 165s Get:117 http://ftpmaster.internal/ubuntu plucky/universe amd64 libxerces-c3.2t64 amd64 3.2.4+debian-1.3 [917 kB] 165s Get:118 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgdal36 amd64 3.10.0+dfsg-1 [10.2 MB] 165s Get:119 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-metadata all 12-4 [6582 B] 165s Get:120 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-tablesorter all 1:2.31.3+dfsg1-4 [192 kB] 165s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-throttle-debounce all 1.1+dfsg.1-2 [12.5 kB] 165s Get:122 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblbfgsb0 amd64 3.0+dfsg.4-1build1 [29.9 kB] 165s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 pybuild-plugin-autopkgtest all 6.20241217 [1746 B] 165s Get:124 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-packaging all 24.2-1 [51.5 kB] 165s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyproject-hooks all 1.2.0-1 [10.2 kB] 165s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-toml all 0.10.2-1 [16.5 kB] 165s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-wheel all 0.45.1-1 [57.7 kB] 165s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-build all 1.2.2-1 [31.0 kB] 165s Get:129 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-installer all 0.7.0+dfsg1-3 [17.4 kB] 165s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 pybuild-plugin-pyproject all 6.20241217 [1730 B] 165s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-affine all 2.4.0-1 [14.3 kB] 165s Get:132 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-all amd64 3.13.1-1~exp2 [894 B] 165s Get:133 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-numpy amd64 1:1.26.4+ds-12 [5319 kB] 165s Get:134 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-cftime amd64 1.6.4-1build1 [346 kB] 165s Get:135 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-click all 8.1.8-1 [79.8 kB] 165s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-click-plugins all 1.1.1-4 [9288 B] 165s Get:137 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-cligj all 0.7.2-2 [7788 B] 165s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-cloudpickle all 3.1.0-1 [22.4 kB] 165s Get:139 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-coverage amd64 7.4.4+dfsg1-0ubuntu3 [150 kB] 165s Get:140 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-fsspec all 2024.10.0-1 [207 kB] 166s Get:141 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-toolz all 1.0.0-2 [45.0 kB] 166s Get:142 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-locket all 1.0.0-2 [5872 B] 166s Get:143 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-partd all 1.4.2-1 [15.7 kB] 166s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-dask all 2024.12.1+dfsg-1 [875 kB] 166s Get:145 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dateutil all 2.9.0-3 [80.2 kB] 166s Get:146 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-decorator all 5.1.1-5 [10.1 kB] 166s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-iniconfig all 1.1.1-2 [6024 B] 166s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-netcdf4 amd64 1.7.2-1build1 [942 kB] 166s Get:149 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-tz all 2024.2-1 [31.5 kB] 166s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pandas-lib amd64 2.2.3+dfsg-5ubuntu1 [8271 kB] 166s Get:151 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pandas all 2.2.3+dfsg-5ubuntu1 [3112 kB] 166s Get:152 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pluggy all 1.5.0-1 [21.0 kB] 166s Get:153 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyproj amd64 3.7.0-1build1 [633 kB] 166s Get:154 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pytest all 8.3.4-1 [252 kB] 166s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-isonscreen all 1.2.0-1.1 [3244 B] 166s Get:156 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pytest-cov all 5.0.0-1 [21.3 kB] 166s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pytest-timeout all 2.3.1-1 [22.1 kB] 166s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-rasterio amd64 1.4.3-1build1 [2049 kB] 166s Get:159 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-xarray all 2024.09.0-1 [780 kB] 166s Get:160 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-scipy amd64 1.14.1-3ubuntu1 [22.3 MB] 167s Get:161 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-rioxarray all 0.18.1-2 [1394 kB] 168s Fetched 169 MB in 8s (19.9 MB/s) 168s Selecting previously unselected package python3.12-minimal. 168s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76533 files and directories currently installed.) 168s Preparing to unpack .../000-python3.12-minimal_3.12.8-3_amd64.deb ... 168s Unpacking python3.12-minimal (3.12.8-3) ... 168s Selecting previously unselected package libjs-jquery. 168s Preparing to unpack .../001-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 168s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 168s Selecting previously unselected package libjs-jquery-hotkeys. 168s Preparing to unpack .../002-libjs-jquery-hotkeys_0~20130707+git2d51e3a9+dfsg-2.1_all.deb ... 168s Unpacking libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2.1) ... 168s Selecting previously unselected package python3.12. 168s Preparing to unpack .../003-python3.12_3.12.8-3_amd64.deb ... 168s Unpacking python3.12 (3.12.8-3) ... 168s Selecting previously unselected package m4. 168s Preparing to unpack .../004-m4_1.4.19-4build1_amd64.deb ... 168s Unpacking m4 (1.4.19-4build1) ... 168s Selecting previously unselected package autoconf. 168s Preparing to unpack .../005-autoconf_2.72-3_all.deb ... 168s Unpacking autoconf (2.72-3) ... 168s Selecting previously unselected package autotools-dev. 168s Preparing to unpack .../006-autotools-dev_20220109.1_all.deb ... 168s Unpacking autotools-dev (20220109.1) ... 168s Selecting previously unselected package automake. 168s Preparing to unpack .../007-automake_1%3a1.16.5-1.3ubuntu1_all.deb ... 168s Unpacking automake (1:1.16.5-1.3ubuntu1) ... 168s Selecting previously unselected package autopoint. 168s Preparing to unpack .../008-autopoint_0.22.5-3_all.deb ... 168s Unpacking autopoint (0.22.5-3) ... 168s Selecting previously unselected package libisl23:amd64. 168s Preparing to unpack .../009-libisl23_0.27-1_amd64.deb ... 168s Unpacking libisl23:amd64 (0.27-1) ... 168s Selecting previously unselected package libmpc3:amd64. 168s Preparing to unpack .../010-libmpc3_1.3.1-1build2_amd64.deb ... 168s Unpacking libmpc3:amd64 (1.3.1-1build2) ... 168s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 168s Preparing to unpack .../011-cpp-14-x86-64-linux-gnu_14.2.0-12ubuntu1_amd64.deb ... 168s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-12ubuntu1) ... 168s Selecting previously unselected package cpp-14. 168s Preparing to unpack .../012-cpp-14_14.2.0-12ubuntu1_amd64.deb ... 168s Unpacking cpp-14 (14.2.0-12ubuntu1) ... 168s Selecting previously unselected package cpp-x86-64-linux-gnu. 168s Preparing to unpack .../013-cpp-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 168s Unpacking cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 168s Selecting previously unselected package cpp. 168s Preparing to unpack .../014-cpp_4%3a14.1.0-2ubuntu1_amd64.deb ... 168s Unpacking cpp (4:14.1.0-2ubuntu1) ... 168s Selecting previously unselected package libcc1-0:amd64. 168s Preparing to unpack .../015-libcc1-0_14.2.0-12ubuntu1_amd64.deb ... 168s Unpacking libcc1-0:amd64 (14.2.0-12ubuntu1) ... 168s Selecting previously unselected package libgomp1:amd64. 168s Preparing to unpack .../016-libgomp1_14.2.0-12ubuntu1_amd64.deb ... 168s Unpacking libgomp1:amd64 (14.2.0-12ubuntu1) ... 168s Selecting previously unselected package libitm1:amd64. 168s Preparing to unpack .../017-libitm1_14.2.0-12ubuntu1_amd64.deb ... 168s Unpacking libitm1:amd64 (14.2.0-12ubuntu1) ... 168s Selecting previously unselected package libasan8:amd64. 168s Preparing to unpack .../018-libasan8_14.2.0-12ubuntu1_amd64.deb ... 168s Unpacking libasan8:amd64 (14.2.0-12ubuntu1) ... 168s Selecting previously unselected package liblsan0:amd64. 168s Preparing to unpack .../019-liblsan0_14.2.0-12ubuntu1_amd64.deb ... 168s Unpacking liblsan0:amd64 (14.2.0-12ubuntu1) ... 168s Selecting previously unselected package libtsan2:amd64. 168s Preparing to unpack .../020-libtsan2_14.2.0-12ubuntu1_amd64.deb ... 168s Unpacking libtsan2:amd64 (14.2.0-12ubuntu1) ... 168s Selecting previously unselected package libubsan1:amd64. 168s Preparing to unpack .../021-libubsan1_14.2.0-12ubuntu1_amd64.deb ... 168s Unpacking libubsan1:amd64 (14.2.0-12ubuntu1) ... 168s Selecting previously unselected package libhwasan0:amd64. 168s Preparing to unpack .../022-libhwasan0_14.2.0-12ubuntu1_amd64.deb ... 168s Unpacking libhwasan0:amd64 (14.2.0-12ubuntu1) ... 168s Selecting previously unselected package libquadmath0:amd64. 168s Preparing to unpack .../023-libquadmath0_14.2.0-12ubuntu1_amd64.deb ... 168s Unpacking libquadmath0:amd64 (14.2.0-12ubuntu1) ... 169s Selecting previously unselected package libgcc-14-dev:amd64. 169s Preparing to unpack .../024-libgcc-14-dev_14.2.0-12ubuntu1_amd64.deb ... 169s Unpacking libgcc-14-dev:amd64 (14.2.0-12ubuntu1) ... 169s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 169s Preparing to unpack .../025-gcc-14-x86-64-linux-gnu_14.2.0-12ubuntu1_amd64.deb ... 169s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-12ubuntu1) ... 169s Selecting previously unselected package gcc-14. 169s Preparing to unpack .../026-gcc-14_14.2.0-12ubuntu1_amd64.deb ... 169s Unpacking gcc-14 (14.2.0-12ubuntu1) ... 169s Selecting previously unselected package gcc-x86-64-linux-gnu. 169s Preparing to unpack .../027-gcc-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 169s Unpacking gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 169s Selecting previously unselected package gcc. 169s Preparing to unpack .../028-gcc_4%3a14.1.0-2ubuntu1_amd64.deb ... 169s Unpacking gcc (4:14.1.0-2ubuntu1) ... 169s Selecting previously unselected package libstdc++-14-dev:amd64. 169s Preparing to unpack .../029-libstdc++-14-dev_14.2.0-12ubuntu1_amd64.deb ... 169s Unpacking libstdc++-14-dev:amd64 (14.2.0-12ubuntu1) ... 169s Selecting previously unselected package g++-14-x86-64-linux-gnu. 169s Preparing to unpack .../030-g++-14-x86-64-linux-gnu_14.2.0-12ubuntu1_amd64.deb ... 169s Unpacking g++-14-x86-64-linux-gnu (14.2.0-12ubuntu1) ... 169s Selecting previously unselected package g++-14. 169s Preparing to unpack .../031-g++-14_14.2.0-12ubuntu1_amd64.deb ... 169s Unpacking g++-14 (14.2.0-12ubuntu1) ... 169s Selecting previously unselected package g++-x86-64-linux-gnu. 169s Preparing to unpack .../032-g++-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 169s Unpacking g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 170s Selecting previously unselected package g++. 170s Preparing to unpack .../033-g++_4%3a14.1.0-2ubuntu1_amd64.deb ... 170s Unpacking g++ (4:14.1.0-2ubuntu1) ... 170s Selecting previously unselected package build-essential. 170s Preparing to unpack .../034-build-essential_12.10ubuntu1_amd64.deb ... 170s Unpacking build-essential (12.10ubuntu1) ... 170s Selecting previously unselected package libdebhelper-perl. 170s Preparing to unpack .../035-libdebhelper-perl_13.20ubuntu1_all.deb ... 170s Unpacking libdebhelper-perl (13.20ubuntu1) ... 170s Selecting previously unselected package libtool. 170s Preparing to unpack .../036-libtool_2.4.7-8_all.deb ... 170s Unpacking libtool (2.4.7-8) ... 170s Selecting previously unselected package dh-autoreconf. 170s Preparing to unpack .../037-dh-autoreconf_20_all.deb ... 170s Unpacking dh-autoreconf (20) ... 170s Selecting previously unselected package libarchive-zip-perl. 170s Preparing to unpack .../038-libarchive-zip-perl_1.68-1_all.deb ... 170s Unpacking libarchive-zip-perl (1.68-1) ... 170s Selecting previously unselected package libfile-stripnondeterminism-perl. 170s Preparing to unpack .../039-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... 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171s Selecting previously unselected package libsharpyuv0:amd64. 171s Preparing to unpack .../083-libsharpyuv0_1.4.0-0.1_amd64.deb ... 171s Unpacking libsharpyuv0:amd64 (1.4.0-0.1) ... 171s Selecting previously unselected package libwebp7:amd64. 171s Preparing to unpack .../084-libwebp7_1.4.0-0.1_amd64.deb ... 171s Unpacking libwebp7:amd64 (1.4.0-0.1) ... 171s Selecting previously unselected package libtiff6:amd64. 171s Preparing to unpack .../085-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ... 171s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 171s Selecting previously unselected package libproj25:amd64. 171s Preparing to unpack .../086-libproj25_9.5.1-1_amd64.deb ... 171s Unpacking libproj25:amd64 (9.5.1-1) ... 171s Selecting previously unselected package libgeotiff5:amd64. 171s Preparing to unpack .../087-libgeotiff5_1.7.3-1_amd64.deb ... 171s Unpacking libgeotiff5:amd64 (1.7.3-1) ... 172s Selecting previously unselected package libgif7:amd64. 172s Preparing to unpack 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Preparing to unpack .../103-libltdl7_2.4.7-8_amd64.deb ... 172s Unpacking libltdl7:amd64 (2.4.7-8) ... 172s Selecting previously unselected package libodbc2:amd64. 172s Preparing to unpack .../104-libodbc2_2.3.12-1ubuntu1_amd64.deb ... 172s Unpacking libodbc2:amd64 (2.3.12-1ubuntu1) ... 172s Selecting previously unselected package unixodbc-common. 172s Preparing to unpack .../105-unixodbc-common_2.3.12-1ubuntu1_all.deb ... 172s Unpacking unixodbc-common (2.3.12-1ubuntu1) ... 172s Selecting previously unselected package libodbcinst2:amd64. 172s Preparing to unpack .../106-libodbcinst2_2.3.12-1ubuntu1_amd64.deb ... 172s Unpacking libodbcinst2:amd64 (2.3.12-1ubuntu1) ... 172s Selecting previously unselected package libogdi4.1:amd64. 172s Preparing to unpack .../107-libogdi4.1_4.1.1+ds-5_amd64.deb ... 172s Unpacking libogdi4.1:amd64 (4.1.1+ds-5) ... 172s Selecting previously unselected package libopenjp2-7:amd64. 172s Preparing to unpack .../108-libopenjp2-7_2.5.0-2ubuntu2_amd64.deb ... 172s Unpacking libopenjp2-7:amd64 (2.5.0-2ubuntu2) ... 172s Selecting previously unselected package libgpgmepp6t64:amd64. 172s Preparing to unpack .../109-libgpgmepp6t64_1.24.1-2ubuntu1_amd64.deb ... 172s Unpacking libgpgmepp6t64:amd64 (1.24.1-2ubuntu1) ... 172s Selecting previously unselected package liblcms2-2:amd64. 172s Preparing to unpack .../110-liblcms2-2_2.16-2_amd64.deb ... 172s Unpacking liblcms2-2:amd64 (2.16-2) ... 172s Selecting previously unselected package libpoppler140:amd64. 172s Preparing to unpack .../111-libpoppler140_24.08.0-3_amd64.deb ... 172s Unpacking libpoppler140:amd64 (24.08.0-3) ... 172s Selecting previously unselected package libpq5:amd64. 172s Preparing to unpack .../112-libpq5_17.2-1_amd64.deb ... 172s Unpacking libpq5:amd64 (17.2-1) ... 172s Selecting previously unselected package libqhull-r8.0:amd64. 172s Preparing to unpack .../113-libqhull-r8.0_2020.2-6build1_amd64.deb ... 172s Unpacking libqhull-r8.0:amd64 (2020.2-6build1) ... 172s Selecting previously unselected package librttopo1:amd64. 172s Preparing to unpack .../114-librttopo1_1.1.0-3build2_amd64.deb ... 172s Unpacking librttopo1:amd64 (1.1.0-3build2) ... 172s Selecting previously unselected package libspatialite8t64:amd64. 172s Preparing to unpack .../115-libspatialite8t64_5.1.0-3build1_amd64.deb ... 172s Unpacking libspatialite8t64:amd64 (5.1.0-3build1) ... 172s Selecting previously unselected package libxerces-c3.2t64:amd64. 172s Preparing to unpack .../116-libxerces-c3.2t64_3.2.4+debian-1.3_amd64.deb ... 172s Unpacking libxerces-c3.2t64:amd64 (3.2.4+debian-1.3) ... 172s Selecting previously unselected package libgdal36:amd64. 172s Preparing to unpack .../117-libgdal36_3.10.0+dfsg-1_amd64.deb ... 172s Unpacking libgdal36:amd64 (3.10.0+dfsg-1) ... 173s Selecting previously unselected package libjs-jquery-metadata. 173s Preparing to unpack .../118-libjs-jquery-metadata_12-4_all.deb ... 173s Unpacking libjs-jquery-metadata (12-4) ... 173s Selecting previously unselected package libjs-jquery-tablesorter. 173s Preparing to unpack .../119-libjs-jquery-tablesorter_1%3a2.31.3+dfsg1-4_all.deb ... 173s Unpacking libjs-jquery-tablesorter (1:2.31.3+dfsg1-4) ... 173s Selecting previously unselected package libjs-jquery-throttle-debounce. 173s Preparing to unpack .../120-libjs-jquery-throttle-debounce_1.1+dfsg.1-2_all.deb ... 173s Unpacking libjs-jquery-throttle-debounce (1.1+dfsg.1-2) ... 173s Selecting previously unselected package liblbfgsb0:amd64. 173s Preparing to unpack .../121-liblbfgsb0_3.0+dfsg.4-1build1_amd64.deb ... 173s Unpacking liblbfgsb0:amd64 (3.0+dfsg.4-1build1) ... 173s Selecting previously unselected package pybuild-plugin-autopkgtest. 173s Preparing to unpack .../122-pybuild-plugin-autopkgtest_6.20241217_all.deb ... 173s Unpacking pybuild-plugin-autopkgtest (6.20241217) ... 173s Selecting previously unselected package python3-packaging. 173s Preparing to unpack .../123-python3-packaging_24.2-1_all.deb ... 173s Unpacking python3-packaging (24.2-1) ... 173s Selecting previously unselected package python3-pyproject-hooks. 173s Preparing to unpack .../124-python3-pyproject-hooks_1.2.0-1_all.deb ... 173s Unpacking python3-pyproject-hooks (1.2.0-1) ... 173s Selecting previously unselected package python3-toml. 173s Preparing to unpack .../125-python3-toml_0.10.2-1_all.deb ... 173s Unpacking python3-toml (0.10.2-1) ... 173s Selecting previously unselected package python3-wheel. 173s Preparing to unpack .../126-python3-wheel_0.45.1-1_all.deb ... 173s Unpacking python3-wheel (0.45.1-1) ... 173s Selecting previously unselected package python3-build. 173s Preparing to unpack .../127-python3-build_1.2.2-1_all.deb ... 173s Unpacking python3-build (1.2.2-1) ... 173s Selecting previously unselected package python3-installer. 173s Preparing to unpack .../128-python3-installer_0.7.0+dfsg1-3_all.deb ... 173s Unpacking python3-installer (0.7.0+dfsg1-3) ... 173s Selecting previously unselected package pybuild-plugin-pyproject. 173s Preparing to unpack .../129-pybuild-plugin-pyproject_6.20241217_all.deb ... 173s Unpacking pybuild-plugin-pyproject (6.20241217) ... 173s Selecting previously unselected package python3-affine. 173s Preparing to unpack .../130-python3-affine_2.4.0-1_all.deb ... 173s Unpacking python3-affine (2.4.0-1) ... 173s Selecting previously unselected package python3-all. 173s Preparing to unpack .../131-python3-all_3.13.1-1~exp2_amd64.deb ... 173s Unpacking python3-all (3.13.1-1~exp2) ... 173s Selecting previously unselected package python3-numpy. 173s Preparing to unpack .../132-python3-numpy_1%3a1.26.4+ds-12_amd64.deb ... 173s Unpacking python3-numpy (1:1.26.4+ds-12) ... 173s Selecting previously unselected package python3-cftime. 173s Preparing to unpack .../133-python3-cftime_1.6.4-1build1_amd64.deb ... 173s Unpacking python3-cftime (1.6.4-1build1) ... 173s Selecting previously unselected package python3-click. 173s Preparing to unpack .../134-python3-click_8.1.8-1_all.deb ... 173s Unpacking python3-click (8.1.8-1) ... 173s Selecting previously unselected package python3-click-plugins. 173s Preparing to unpack .../135-python3-click-plugins_1.1.1-4_all.deb ... 173s Unpacking python3-click-plugins (1.1.1-4) ... 173s Selecting previously unselected package python3-cligj. 173s Preparing to unpack .../136-python3-cligj_0.7.2-2_all.deb ... 173s Unpacking python3-cligj (0.7.2-2) ... 173s Selecting previously unselected package python3-cloudpickle. 173s Preparing to unpack .../137-python3-cloudpickle_3.1.0-1_all.deb ... 173s Unpacking python3-cloudpickle (3.1.0-1) ... 173s Selecting previously unselected package python3-coverage. 173s Preparing to unpack .../138-python3-coverage_7.4.4+dfsg1-0ubuntu3_amd64.deb ... 173s Unpacking python3-coverage (7.4.4+dfsg1-0ubuntu3) ... 173s Selecting previously unselected package python3-fsspec. 173s Preparing to unpack .../139-python3-fsspec_2024.10.0-1_all.deb ... 173s Unpacking 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181s Setting up libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2.1) ... 181s Setting up libisl23:amd64 (0.27-1) ... 181s Setting up python3-affine (2.4.0-1) ... 181s Setting up python3-build (1.2.2-1) ... 181s Setting up libde265-0:amd64 (1.0.15-1build4) ... 181s Setting up libkmlbase1t64:amd64 (1.3.0-12build1) ... 181s Setting up python3-locket (1.0.0-2) ... 181s Setting up libcc1-0:amd64 (14.2.0-12ubuntu1) ... 181s Setting up liblsan0:amd64 (14.2.0-12ubuntu1) ... 181s Setting up libsz2:amd64 (1.1.3-1) ... 181s Setting up libitm1:amd64 (14.2.0-12ubuntu1) ... 181s Setting up gdal-plugins:amd64 (3.10.0+dfsg-1) ... 181s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 181s Setting up automake (1:1.16.5-1.3ubuntu1) ... 181s update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode 181s Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... 181s Setting up python3-partd (1.4.2-1) ... 181s Setting up libodbcinst2:amd64 (2.3.12-1ubuntu1) ... 181s Setting up liblapack3:amd64 (3.12.0-4) ... 181s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 181s Setting up gettext (0.22.5-3) ... 181s Setting up libarpack2t64:amd64 (3.9.1-4) ... 181s Setting up pybuild-plugin-pyproject (6.20241217) ... 181s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 181s Setting up python3-pytest (8.3.4-1) ... 181s Setting up libgeos-c1t64:amd64 (3.13.0-1) ... 181s Setting up python3-cligj (0.7.2-2) ... 181s Setting up python3-dask (2024.12.1+dfsg-1) ... 183s Setting up intltool-debian (0.35.0+20060710.6) ... 183s Setting up libkmldom1t64:amd64 (1.3.0-12build1) ... 183s Setting up libjs-jquery-metadata (12-4) ... 183s Setting up libjs-jquery-isonscreen (1.2.0-1.1) ... 183s Setting up cpp-14-x86-64-linux-gnu (14.2.0-12ubuntu1) ... 183s Setting up libgav1-1:amd64 (0.19.0-3) ... 183s Setting up python3-numpy (1:1.26.4+ds-12) ... 186s Setting up cpp-14 (14.2.0-12ubuntu1) ... 186s Setting up libhdf4-0-alt:amd64 (4.3.0-1) ... 186s Setting up dh-strip-nondeterminism (1.14.0-1) ... 186s Setting up librttopo1:amd64 (1.1.0-3build2) ... 186s Setting up libjs-jquery-tablesorter (1:2.31.3+dfsg1-4) ... 186s Setting up libfreexl1:amd64 (2.0.0-1build2) ... 186s Setting up libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 186s Setting up libarmadillo14 (1:14.2.1+dfsg-1) ... 186s Setting up libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ... 186s Setting up libgcc-14-dev:amd64 (14.2.0-12ubuntu1) ... 186s Setting up libhdf5-103-1t64:amd64 (1.10.10+repack-5ubuntu1) ... 186s Setting up libstdc++-14-dev:amd64 (14.2.0-12ubuntu1) ... 186s Setting up libyuv0:amd64 (0.0.1899.20250103-1) ... 186s Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1build1) ... 186s Setting up cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 186s Setting up libhdf5-hl-100t64:amd64 (1.10.10+repack-5ubuntu1) ... 186s Setting up libavif16:amd64 (1.1.1-1ubuntu1) ... 186s Setting up libnetcdf19t64:amd64 (1:4.9.2-6ubuntu1) ... 186s Setting up python3-scipy (1.14.1-3ubuntu1) ... 191s Setting up python3-pytest-timeout (2.3.1-1) ... 191s Setting up libproj25:amd64 (9.5.1-1) ... 191s Setting up po-debconf (1.0.21+nmu1) ... 191s Setting up python3-pandas-lib:amd64 (2.2.3+dfsg-5ubuntu1) ... 191s Setting up python3-pytest-cov (5.0.0-1) ... 191s Setting up libkmlengine1t64:amd64 (1.3.0-12build1) ... 191s Setting up python3-pyproj (3.7.0-1build1) ... 191s Setting up libgeotiff5:amd64 (1.7.3-1) ... 191s Setting up python3-pandas (2.2.3+dfsg-5ubuntu1) ... 198s Setting up python3-cftime (1.6.4-1build1) ... 198s Setting up cpp (4:14.1.0-2ubuntu1) ... 198s Setting up libpoppler140:amd64 (24.08.0-3) ... 198s Setting up gcc-14-x86-64-linux-gnu (14.2.0-12ubuntu1) ... 198s Setting up python3-netcdf4 (1.7.2-1build1) ... 198s Setting up libspatialite8t64:amd64 (5.1.0-3build1) ... 198s Setting up gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 198s Setting up python3-xarray (2024.09.0-1) ... 200s Setting up gcc-14 (14.2.0-12ubuntu1) ... 200s Setting up g++-14-x86-64-linux-gnu (14.2.0-12ubuntu1) ... 200s Setting up g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 200s Setting up g++-14 (14.2.0-12ubuntu1) ... 200s Setting up libtool (2.4.7-8) ... 200s Setting up gcc (4:14.1.0-2ubuntu1) ... 200s Setting up dh-autoreconf (20) ... 200s Setting up g++ (4:14.1.0-2ubuntu1) ... 200s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 200s Setting up build-essential (12.10ubuntu1) ... 200s Setting up debhelper (13.20ubuntu1) ... 200s Setting up pybuild-plugin-autopkgtest (6.20241217) ... 200s Setting up libheif1:amd64 (1.19.3-1) ... 200s Setting up libgdal36:amd64 (3.10.0+dfsg-1) ... 200s Setting up libheif-plugin-aomdec:amd64 (1.19.3-1) ... 200s Setting up libheif-plugin-libde265:amd64 (1.19.3-1) ... 200s Setting up python3-rasterio (1.4.3-1build1) ... 200s Setting up python3-rioxarray (0.18.1-2) ... 200s Processing triggers for systemd (257-2ubuntu1) ... 201s Processing triggers for man-db (2.13.0-1) ... 201s Processing triggers for install-info (7.1.1-1) ... 201s Processing triggers for libc-bin (2.40-4ubuntu1) ... 202s autopkgtest [09:33:32]: test pybuild-autopkgtest: pybuild-autopkgtest 202s autopkgtest [09:33:32]: test pybuild-autopkgtest: [----------------------- 204s pybuild-autopkgtest 204s I: pybuild base:311: cd /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build; python3.12 -m pytest -k "not test_clip_geojson__no_drop and not test_clip_geojson and not test_interpolate_na and not test_merge_datasets and not test_open_rasterio_mask_chunk_clip and not test_to_raster__different_dtype and not test_nonstandard_dims_write_coordinate_system__projected_ft" 206s ============================= test session starts ============================== 206s platform linux -- Python 3.12.8, pytest-8.3.4, pluggy-1.5.0 206s rootdir: /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build 206s configfile: pyproject.toml 206s plugins: timeout-2.3.1, cov-5.0.0, typeguard-4.4.1 206s collected 491 items / 44 deselected / 447 selected 206s 206s test/integration/test_integration__io.py ............................... [ 6%] 211s .............Xx...x............................................ [ 21%] 211s test/integration/test_integration__io_uri_manager.py ........ [ 22%] 212s test/integration/test_integration_merge.py ..xx. [ 23%] 212s test/integration/test_integration_rioxarray.py ......................... [ 29%] 214s ........................................................................ [ 45%] 215s ........................................................................ [ 61%] 217s ..............................................XX........................ [ 77%] 217s ........................................................................ [ 93%] 218s ............ [ 96%] 218s test/integration/test_integration_xarray_plugin.py ...... [ 97%] 218s test/unit/test_options.py .... [ 98%] 218s test/unit/test_show_versions.py .... [ 99%] 218s test/unit/test_unit_reproject_match.py . [100%] 218s 218s =============================== warnings summary =============================== 218s test/integration/test_integration__io.py: 20 warnings 218s test/integration/test_integration_rioxarray.py: 178 warnings 218s /usr/lib/python3/dist-packages/rioxarray/_io.py:521: DeprecationWarning: string or file could not be read to its end due to unmatched data; this will raise a ValueError in the future. 218s new_val = numpy.fromstring(value.strip("{}"), dtype="float", sep=",") 218s 218s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio] 218s /usr/lib/python3/dist-packages/xarray/core/variable.py:2628: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SolarZenith_1', mode='r', kwargs={'sharing': False}, manager_id='c8c6b6c2-f79c-4934-9253-5359c8795bfe'), but file is not already closed. This may indicate a bug. 218s def __init__(self, dims, data, attrs=None, encoding=None, fastpath=False): 218s 218s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio] 218s /usr/lib/python3/dist-packages/xarray/core/variable.py:2628: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SolarAzimuth_1', mode='r', kwargs={'sharing': False}, manager_id='6e28ef59-1af7-4b8e-bb0c-e7366b25bbf2'), but file is not already closed. This may indicate a bug. 218s def __init__(self, dims, data, attrs=None, encoding=None, fastpath=False): 218s 218s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio] 218s /usr/lib/python3/dist-packages/xarray/core/variable.py:2628: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:gflags_1', mode='r', kwargs={'sharing': False}, manager_id='f6bbf900-084f-4a27-b12f-ced6aa918a02'), but file is not already closed. This may indicate a bug. 218s def __init__(self, dims, data, attrs=None, encoding=None, fastpath=False): 218s 218s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio] 218s /usr/lib/python3/dist-packages/xarray/core/variable.py:2628: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:orbit_pnt_1', mode='r', kwargs={'sharing': False}, manager_id='e200d48f-4c04-4867-bd7a-e00df2d16235'), but file is not already closed. This may indicate a bug. 218s def __init__(self, dims, data, attrs=None, encoding=None, fastpath=False): 218s 218s test/integration/test_integration__io.py::test_serialization 218s :488: RuntimeWarning: numpy.ndarray size changed, may indicate binary incompatibility. Expected 16 from C header, got 96 from PyObject 218s 218s test/integration/test_integration__io.py: 13 warnings 218s test/integration/test_integration_rioxarray.py: 40 warnings 218s /usr/lib/python3/dist-packages/rioxarray/_io.py:939: DeprecationWarning: Supplying chunks as dimension-order tuples is deprecated. It will raise an error in the future. Instead use a dict with dimension names as keys. 218s return result.chunk(chunks, name_prefix=name_prefix, token=token) 218s 218s test/integration/test_integration__io.py: 24 warnings 218s /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/integration/test_integration__io.py:502: DeprecationWarning: dropping variables using `drop` is deprecated; use drop_vars. 218s raster_ds[band_name], expected.sel(band=band).drop("band") 218s 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-True] 218s /usr/lib/python3.12/copy.py:252: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:granule_pnt_1', mode='r', kwargs={'sharing': False}, manager_id='c90832e9-467e-4624-bdfb-ba0dec31dcc8'), but file is not already closed. This may indicate a bug. 218s args = (deepcopy(arg, memo) for arg in args) 218s 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-True] 218s /usr/lib/python3.12/copy.py:252: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:num_observations_1km', mode='r', kwargs={'sharing': False}, manager_id='5a6012cf-1d65-4bae-8c36-98096fbee5a9'), but file is not already closed. This may indicate a bug. 218s args = (deepcopy(arg, memo) for arg in args) 218s 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-True] 218s /usr/lib/python3.12/copy.py:252: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:Range_1', mode='r', kwargs={'sharing': False}, manager_id='253bc4bf-6b9f-4fdd-889c-4bd4022b5c76'), but file is not already closed. This may indicate a bug. 218s args = (deepcopy(arg, memo) for arg in args) 218s 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-True] 218s /usr/lib/python3.12/copy.py:252: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:state_1km_1', mode='r', kwargs={'sharing': False}, manager_id='81e52d10-02b4-4ae3-b165-1d33f87a64d3'), but file is not already closed. This may indicate a bug. 218s args = (deepcopy(arg, memo) for arg in args) 218s 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-True] 218s /usr/lib/python3.12/copy.py:252: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SensorZenith_1', mode='r', kwargs={'sharing': False}, manager_id='1fb055ee-5419-433f-a3d8-2aa271c9b2eb'), but file is not already closed. This may indicate a bug. 218s args = (deepcopy(arg, memo) for arg in args) 218s 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-True] 218s /usr/lib/python3.12/copy.py:252: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SensorAzimuth_1', mode='r', kwargs={'sharing': False}, manager_id='835716e0-d427-4bd1-bcf2-64f1820a8e2f'), but file is not already closed. This may indicate a bug. 218s args = (deepcopy(arg, memo) for arg in args) 218s 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-True] 218s /usr/lib/python3/dist-packages/_pytest/python.py:159: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras0/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='6d02abb1-52e4-4c04-aa82-42b280074084'), but file is not already closed. This may indicate a bug. 218s result = testfunction(**testargs) 218s 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-True] 218s /usr/lib/python3/dist-packages/_pytest/python.py:159: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras0/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='4e72bd15-a2e4-49c7-a504-24d711b7062e'), but file is not already closed. This may indicate a bug. 218s result = testfunction(**testargs) 218s 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-None] 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1823: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras0/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='eb716df1-8942-43f8-bcf3-3d3108635ae2'), but file is not already closed. This may indicate a bug. 218s index_dims = {d for var in index_vars.values() for d in var.dims} 218s 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-None] 218s /usr/lib/python3/dist-packages/xarray/core/common.py:328: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras1/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='765598b5-1cf0-42ea-8c98-3af809ead11d'), but file is not already closed. This may indicate a bug. 218s object.__setattr__(self, name, value) 218s 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-None] 218s /usr/lib/python3/dist-packages/xarray/core/common.py:328: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras1/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='eaa8e7a2-e83e-4734-a178-9fe5d8a83115'), but file is not already closed. This may indicate a bug. 218s object.__setattr__(self, name, value) 218s 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-None] 218s /usr/lib/python3/dist-packages/xarray/core/common.py:328: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras1/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='d67e0041-ecdf-4262-80d2-cef8b62010c6'), but file is not already closed. This may indicate a bug. 218s object.__setattr__(self, name, value) 218s 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-None] 218s /usr/lib/python3/dist-packages/xarray/core/common.py:328: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp8vicbk7p/temp-4.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='016afec8-83d5-405f-9566-915974fb7d90'), but file is not already closed. This may indicate a bug. 218s object.__setattr__(self, name, value) 218s 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-None] 218s /usr/lib/python3/dist-packages/xarray/core/common.py:328: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp8vicbk7p/temp-4.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='752fa1a8-6e27-4361-8197-0d35cb9a9628'), but file is not already closed. This may indicate a bug. 218s object.__setattr__(self, name, value) 218s 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-None] 218s /usr/lib/python3/dist-packages/xarray/core/common.py:328: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp8vicbk7p/temp-4.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='0c8073b1-3540-4380-8ce0-ab5777270b4f'), but file is not already closed. This may indicate a bug. 218s object.__setattr__(self, name, value) 218s 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 218s /usr/lib/python3/dist-packages/xarray/core/dataset.py:282: UserWarning: The specified chunks separate the stored chunks along dimension "y" starting at index 1. This could degrade performance. Instead, consider rechunking after loading. 218s warnings.warn( 218s 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 218s /usr/lib/python3/dist-packages/xarray/core/dataset.py:282: UserWarning: The specified chunks separate the stored chunks along dimension "x" starting at index 1. This could degrade performance. Instead, consider rechunking after loading. 218s warnings.warn( 218s 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 218s /usr/lib/python3/dist-packages/_pytest/python.py:159: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras2/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='8ace7477-8634-400d-84b2-85e23181f3e4'), but file is not already closed. This may indicate a bug. 218s result = testfunction(**testargs) 218s 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 218s /usr/lib/python3/dist-packages/_pytest/python.py:159: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras2/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='352ca95f-7d01-4d48-b7bf-4a858271612e'), but file is not already closed. This may indicate a bug. 218s result = testfunction(**testargs) 218s 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-None] 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1896: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras2/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='0df1aa73-0dd1-4c87-98d3-43cc4124faaa'), but file is not already closed. This may indicate a bug. 218s index_coord_names[id(idx)].add(name) 218s 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-None] 218s /usr/lib/python3/dist-packages/xarray/core/common.py:328: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp97o873fq/temp-6.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='1d0c9ace-f8da-4f36-a6c1-a3486436f90c'), but file is not already closed. This may indicate a bug. 218s object.__setattr__(self, name, value) 218s 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-None] 218s /usr/lib/python3/dist-packages/xarray/core/common.py:328: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp97o873fq/temp-6.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='9b1df62f-ab06-487f-add5-03c632923380'), but file is not already closed. This may indicate a bug. 218s object.__setattr__(self, name, value) 218s 218s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-None] 218s /usr/lib/python3/dist-packages/xarray/core/common.py:328: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp97o873fq/temp-6.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='d8a977eb-054a-40e8-bad1-1ee0dceb629f'), but file is not already closed. This may indicate a bug. 218s object.__setattr__(self, name, value) 218s 218s test/integration/test_integration__io.py::test_platecarree 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras3/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='6ea7994c-29c6-4715-b441-c16be2603ab4'), but file is not already closed. This may indicate a bug. 218s if any(not isinstance(idx, index_type) for idx in indexes.values()): 218s 218s test/integration/test_integration__io.py::test_platecarree 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras3/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='df890577-04b9-4fad-b7cb-aa46f1a5a403'), but file is not already closed. This may indicate a bug. 218s if any(not isinstance(idx, index_type) for idx in indexes.values()): 218s 218s test/integration/test_integration__io.py::test_platecarree 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras3/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='ae17e9aa-259b-4e41-a068-68aa6986712e'), but file is not already closed. This may indicate a bug. 218s if any(not isinstance(idx, index_type) for idx in indexes.values()): 218s 218s test/integration/test_integration__io.py: 8 warnings 218s test/integration/test_integration_rioxarray.py: 2 warnings 218s /usr/lib/python3/dist-packages/rasterio/__init__.py:366: NotGeoreferencedWarning: Dataset has no geotransform, gcps, or rpcs. The identity matrix will be returned. 218s dataset = writer( 218s 218s test/integration/test_integration__io.py::test_notransform 218s test/integration/test_integration__io.py::test_mask_and_scale__unicode[open_rasterio] 218s test/integration/test_integration__io.py::test_mask_and_scale__unicode[open_rasterio1] 218s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio] 218s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio1] 218s /usr/lib/python3/dist-packages/rioxarray/_io.py:1143: NotGeoreferencedWarning: Dataset has no geotransform, gcps, or rpcs. The identity matrix will be returned. 218s warnings.warn(str(rio_warning.message), type(rio_warning.message)) # type: ignore 218s 218s test/integration/test_integration__io.py::test_rasterio_vrt[False] 218s /usr/lib/python3/dist-packages/xarray/core/variable.py:3005: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp4nafboc9/temp-17.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='f28bf867-58ce-4c5b-a60a-52c69397c849'), but file is not already closed. This may indicate a bug. 218s for dim, size in zip(var.dims, var.shape, strict=True): 218s 218s test/integration/test_integration__io.py::test_rasterio_vrt[False] 218s /usr/lib/python3/dist-packages/xarray/core/variable.py:3005: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp4nafboc9/temp-17.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='5b4acdee-e818-4f8e-8d51-71a9ef72777b'), but file is not already closed. This may indicate a bug. 218s for dim, size in zip(var.dims, var.shape, strict=True): 218s 218s test/integration/test_integration__io.py::test_rasterio_vrt[False] 218s /usr/lib/python3/dist-packages/xarray/core/variable.py:3005: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp4nafboc9/temp-17.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='56d1dee7-3cb0-4e96-9bf7-65cfa0ee3c0d'), but file is not already closed. This may indicate a bug. 218s for dim, size in zip(var.dims, var.shape, strict=True): 218s 218s test/integration/test_integration__io.py::test_mask_and_scale[open_rasterio] 218s /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/integration/test_integration__io.py:1100: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 218s with open_rasterio(test_file, mask_and_scale=True) as rds: 218s 218s test/integration/test_integration__io.py::test_mask_and_scale[open_rasterio1] 218s test/integration/test_integration__io.py::test_mask_and_scale__to_raster[open_rasterio1] 218s /usr/lib/python3/dist-packages/rioxarray/xarray_plugin.py:59: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 218s rds = _io.open_rasterio( 218s 218s test/integration/test_integration__io.py::test_mask_and_scale__to_raster[open_rasterio] 218s /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/integration/test_integration__io.py:1172: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 218s with open_rasterio(test_file, mask_and_scale=True) as rds: 218s 218s test/integration/test_integration__io.py::test_mask_and_scale__unicode[open_rasterio] 218s /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/integration/test_integration__io.py:1185: SerializationWarning: variable 'LST' has _Unsigned attribute but is not of integer type. Ignoring attribute. 218s with open_rasterio(test_file, mask_and_scale=True) as rds: 218s 218s test/integration/test_integration__io.py::test_mask_and_scale__unicode[open_rasterio1] 218s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio1] 218s /usr/lib/python3/dist-packages/rioxarray/xarray_plugin.py:59: SerializationWarning: variable 'LST' has _Unsigned attribute but is not of integer type. Ignoring attribute. 218s rds = _io.open_rasterio( 218s 218s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio] 218s /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/integration/test_integration__io.py:1205: SerializationWarning: variable 'LST' has _Unsigned attribute but is not of integer type. Ignoring attribute. 218s with open_rasterio(test_file, mask_and_scale=True) as rds: 218s 218s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio] 218s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio1] 218s test/integration/test_integration__io.py::test_writing_gcps 218s /usr/lib/python3/dist-packages/rasterio/__init__.py:366: NotGeoreferencedWarning: The given matrix is equal to Affine.identity or its flipped counterpart. GDAL may ignore this matrix and save no geotransform without raising an error. This behavior is somewhat driver-specific. 218s dataset = writer( 218s 218s test/integration/test_integration__io.py::test_notgeoreferenced_warning[open_rasterio1] 218s :868: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpfnt_0an7/temp-21.tif', mode='r', kwargs={'sharing': False}, manager_id='5e5df273-ec91-400b-b96e-6f20f87753bc'), but file is not already closed. This may indicate a bug. 218s 218s test/integration/test_integration__io.py::test_cint16_dtype[None] 218s test/integration/test_integration__io.py::test_cint16_dtype[complex_int16] 218s test/integration/test_integration__io.py::test_cint16_dtype_nodata 218s test/integration/test_integration__io.py::test_cint16_dtype_masked[None] 218s test/integration/test_integration__io.py::test_cint16_dtype_masked[complex_int16] 218s test/integration/test_integration__io.py::test_cint16_promote_dtype 218s test/integration/test_integration__io.py::test_cint16_promote_dtype 218s /usr/lib/python3/dist-packages/rasterio/__init__.py:256: ComplexWarning: Casting complex values to real discards the imaginary part 218s nodata = float(nodata) 218s 218s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 218s /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpx0zgo2aj/temp-3.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='33ff9a77-dc73-4aca-b542-14cc78969d6a'), but file is not already closed. This may indicate a bug. 218s gc.collect() 218s 218s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 218s /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpx0zgo2aj/temp-3.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='c3e50cd2-9026-48b3-93a5-6ac1fb74a182'), but file is not already closed. This may indicate a bug. 218s gc.collect() 218s 218s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 218s /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpx0zgo2aj/temp-3.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='d337a929-9ad9-4930-a5e4-ed02a5bcb300'), but file is not already closed. This may indicate a bug. 218s gc.collect() 218s 218s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 218s /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpb90ln3rb/temp-5.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='bba2a7bb-3a6a-4451-9842-a5e8981905d1'), but file is not already closed. This may indicate a bug. 218s gc.collect() 218s 218s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 218s /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpb90ln3rb/temp-5.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='fe1e7086-36be-4857-9a6c-ec9c197f9e14'), but file is not already closed. This may indicate a bug. 218s gc.collect() 218s 218s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 218s /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpb90ln3rb/temp-5.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='6c16811e-2070-40a5-85df-fa12da4c20d4'), but file is not already closed. This may indicate a bug. 218s gc.collect() 218s 218s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 218s /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpumgspjdn/temp-22.tif', mode='r', kwargs={'sharing': False}, manager_id='5cf2c956-a3f2-49e9-baee-89dca5ec93e5'), but file is not already closed. This may indicate a bug. 218s gc.collect() 218s 218s test/integration/test_integration_rioxarray.py::test_reproject_match__rotated 218s test/integration/test_integration_rioxarray.py::test_reproject_match__rotated 218s /usr/lib/python3/dist-packages/rioxarray/rioxarray.py:696: UserWarning: Transform that is non-rectilinear or with rotation found. Unable to recalculate. 218s warnings.warn( 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-False-False-open_method2] 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1896: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='e5c8e2e7-89f6-4e64-a5a4-004793c05f38'), but file is not already closed. This may indicate a bug. 218s index_coord_names[id(idx)].add(name) 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-False-False-open_method2] 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1896: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='4d197a8a-a8e4-4743-b1d3-b44b6478a79e'), but file is not already closed. This may indicate a bug. 218s index_coord_names[id(idx)].add(name) 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-False-False-open_method3] 218s /usr/lib/python3/dist-packages/dask/order.py:212: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='b56358d2-15c9-49be-8c0c-06e9802fe84d'), but file is not already closed. This may indicate a bug. 218s def sort_key(x: Key) -> tuple[int, int, int, int, str]: 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-False-False-open_method3] 218s /usr/lib/python3/dist-packages/dask/order.py:212: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='af7fc8b8-623b-4c24-a8f1-77433e2630fe'), but file is not already closed. This may indicate a bug. 218s def sort_key(x: Key) -> tuple[int, int, int, int, str]: 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-False-False-open_method3] 218s /usr/lib/python3/dist-packages/dask/order.py:212: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='bad4e723-fdaa-4064-a0ad-6289ee99c43c'), but file is not already closed. This may indicate a bug. 218s def sort_key(x: Key) -> tuple[int, int, int, int, str]: 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-False-False-open_method3] 218s /usr/lib/python3/dist-packages/dask/order.py:212: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='ac84ca1e-39f2-4e15-b16f-72da11732854'), but file is not already closed. This may indicate a bug. 218s def sort_key(x: Key) -> tuple[int, int, int, int, str]: 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-False-False-open_method3] 218s /usr/lib/python3/dist-packages/dask/order.py:212: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='5324f992-5617-45b6-ad7d-e908bdc881e7'), but file is not already closed. This may indicate a bug. 218s def sort_key(x: Key) -> tuple[int, int, int, int, str]: 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-False-False-open_method3] 218s /usr/lib/python3/dist-packages/dask/order.py:212: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='86a065db-56f4-49ba-a890-63fca1cf41b4'), but file is not already closed. This may indicate a bug. 218s def sort_key(x: Key) -> tuple[int, int, int, int, str]: 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock1-False-True-True-open_method0] 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='f9a96bf6-6cca-4b57-945c-4a7ec8b44821'), but file is not already closed. This may indicate a bug. 218s if any(not isinstance(idx, index_type) for idx in indexes.values()): 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock1-False-False-False-open_method2] 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1686: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='66bd49a6-3ec6-4cd2-b0fc-7b66c6887644'), but file is not already closed. This may indicate a bug. 218s return iter(self._indexes) 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock1-False-False-False-open_method2] 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1686: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='42d07a53-8357-40be-a1bb-73701f668e4c'), but file is not already closed. This may indicate a bug. 218s return iter(self._indexes) 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-True-True-open_method0] 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1518: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='59a876cc-0af9-425d-87db-34b1da2d5770'), but file is not already closed. This may indicate a bug. 218s id_coord_names[v].append(k) 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-True-True-open_method0] 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1518: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='a2c5458d-5b21-4dba-914f-3b786af366be'), but file is not already closed. This may indicate a bug. 218s id_coord_names[v].append(k) 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-True-True-open_method0] 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1518: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='e821fdab-6d8f-432e-beb3-e458b7277871'), but file is not already closed. This may indicate a bug. 218s id_coord_names[v].append(k) 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-True-True-open_method0] 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1518: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='69728ac1-6ae1-4087-8b26-9d3f15a454d1'), but file is not already closed. This may indicate a bug. 218s id_coord_names[v].append(k) 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-True-True-open_method0] 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1518: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='9c61851e-a51c-4164-b821-69ba85913d2b'), but file is not already closed. This may indicate a bug. 218s id_coord_names[v].append(k) 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-True-True-open_method0] 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1518: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='1dc02419-a89e-4373-8e66-7c12efa3e656'), but file is not already closed. This may indicate a bug. 218s id_coord_names[v].append(k) 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-True-True-open_method0] 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1518: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='157817af-ba98-4b0e-b60c-c1888f50842a'), but file is not already closed. This may indicate a bug. 218s id_coord_names[v].append(k) 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-True-True-open_method0] 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1518: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='b7fb9f02-ebb6-45c1-a1f0-1aab1f5e9bac'), but file is not already closed. This may indicate a bug. 218s id_coord_names[v].append(k) 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-True-True-open_method2] 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1896: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='d11dc797-b164-4067-9c78-35179d4f8a30'), but file is not already closed. This may indicate a bug. 218s index_coord_names[id(idx)].add(name) 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-False-False-open_method2] 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1686: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='58e3d294-e203-444a-b428-9a0d98e7a8ee'), but file is not already closed. This may indicate a bug. 218s return iter(self._indexes) 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-False-False-open_method2] 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1686: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='c48a57ef-9bbc-43e6-92e3-7e2b3ad4aa05'), but file is not already closed. This may indicate a bug. 218s return iter(self._indexes) 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster_3d[None-False-True-open_method2] 218s /usr/lib/python3/dist-packages/dask/order.py:81: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='73786bfd-9194-4920-a9fe-6290e7b3078f'), but file is not already closed. This may indicate a bug. 218s def order( 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster_3d[None-False-True-open_method2] 218s /usr/lib/python3/dist-packages/dask/order.py:81: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='c0fb4126-64a6-4a5f-bdeb-45b54b73b931'), but file is not already closed. This may indicate a bug. 218s def order( 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster_3d[None-False-True-open_method2] 218s /usr/lib/python3/dist-packages/dask/order.py:81: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='6d06fd97-d5de-4799-a231-4e4a4d871759'), but file is not already closed. This may indicate a bug. 218s def order( 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster_3d[None-False-True-open_method2] 218s /usr/lib/python3/dist-packages/dask/order.py:81: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='b99af88c-0873-40b6-b092-671b859efbfd'), but file is not already closed. This may indicate a bug. 218s def order( 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster_3d[None-False-True-open_method2] 218s /usr/lib/python3/dist-packages/dask/order.py:81: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='7d44d932-e5e5-4b43-ac14-bf3543537733'), but file is not already closed. This may indicate a bug. 218s def order( 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster_3d[None-False-True-open_method2] 218s /usr/lib/python3/dist-packages/dask/order.py:81: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='4d3512eb-754b-4048-ab77-865b9c0d340f'), but file is not already closed. This may indicate a bug. 218s def order( 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-True-open_method4] 218s /usr/lib/python3/dist-packages/numpy/core/arrayprint.py:934: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='1bbd29d6-3841-4a43-82f1-25b90a1e0efc'), but file is not already closed. This may indicate a bug. 218s def fillFormat(self, data): 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-True-open_method4] 218s /usr/lib/python3/dist-packages/numpy/core/arrayprint.py:934: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='a15e987e-2c35-4671-b599-9d2f3a2c14a6'), but file is not already closed. This may indicate a bug. 218s def fillFormat(self, data): 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-True-open_method4] 218s /usr/lib/python3/dist-packages/numpy/core/arrayprint.py:934: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='62ca5eba-5aa4-42d0-9a4d-d3b4fb1604fb'), but file is not already closed. This may indicate a bug. 218s def fillFormat(self, data): 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-True-open_method4] 218s /usr/lib/python3/dist-packages/numpy/core/arrayprint.py:934: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='83e43eb9-4343-49e2-9442-0f65a2f81490'), but file is not already closed. This may indicate a bug. 218s def fillFormat(self, data): 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[True] 218s /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/integration/test_integration_rioxarray.py:1803: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 218s with rioxarray.open_rasterio( 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[True] 218s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[False] 218s /usr/lib/python3/dist-packages/rioxarray/_io.py:672: UserWarning: Offsets differ across bands. The 'scale_factor' attribute will not be added. See the 'scales' attribute. 218s warnings.warn( 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[True] 218s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[False] 218s /usr/lib/python3/dist-packages/rioxarray/_io.py:681: UserWarning: Offsets differ across bands. The 'add_offset' attribute will not be added. See the 'offsets' attribute. 218s warnings.warn( 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster__dataset__mask_and_scale[True-True] 218s test/integration/test_integration_rioxarray.py::test_to_raster__dataset__mask_and_scale[None-True] 218s /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/integration/test_integration_rioxarray.py:1897: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 218s with rioxarray.open_rasterio( 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster__dataset__mask_and_scale[True-False] 218s /usr/lib/python3/dist-packages/dask/order.py:267: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='ed64b63f-3c15-4311-a0e9-1784ae0f8275'), but file is not already closed. This may indicate a bug. 218s def _with_offset(func: Callable[..., None]) -> Callable[..., None]: 218s 218s test/integration/test_integration_rioxarray.py::test_to_raster__dataset__mask_and_scale[True-False] 218s /usr/lib/python3/dist-packages/dask/order.py:267: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='b7f9927c-b8be-49f0-a9d8-d062bf654ab3'), but file is not already closed. This may indicate a bug. 218s def _with_offset(func: Callable[..., None]) -> Callable[..., None]: 218s 218s test/integration/test_integration_rioxarray.py::test_write_nodata__different_dtype[-1.1_0] 218s /usr/lib/python3/dist-packages/xarray/core/dataarray.py:129: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/test_find_crs.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='3a21da46-39b0-4c3b-b2c9-a89b85bdf110'), but file is not already closed. This may indicate a bug. 218s sizes = dict(zip(dim, shape, strict=True)) 218s 218s test/integration/test_integration_xarray_plugin.py::test_xarray_open_dataset__drop_variables 218s :117: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/cog.tif', mode='r', kwargs={'sharing': False}, manager_id='42c2c4d8-72be-4378-97cd-30fde7b29c5d'), but file is not already closed. This may indicate a bug. 218s 218s test/integration/test_integration_xarray_plugin.py::test_xarray_open_dataset__drop_variables 218s :117: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/cog.tif', mode='r', kwargs={'sharing': False}, manager_id='bc9e0fa2-7a57-4515-93ee-145c5d8b6f62'), but file is not already closed. This may indicate a bug. 218s 218s test/integration/test_integration_xarray_plugin.py::test_xarray_open_dataset__drop_variables 218s :117: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/cog.tif', mode='r', kwargs={'sharing': False}, manager_id='1fd2ae46-9ecb-4241-9240-306a3ff75710'), but file is not already closed. This may indicate a bug. 218s 218s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:num_observations_500m', mode='r', kwargs={'sharing': False}, manager_id='2eb701c1-e770-43c2-86d3-c09d4c1266ce'), but file is not already closed. This may indicate a bug. 218s if any(not isinstance(idx, index_type) for idx in indexes.values()): 218s 218s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:iobs_res_1', mode='r', kwargs={'sharing': False}, manager_id='bb09bdc5-80b1-499e-9e58-c5f8ba6f01ea'), but file is not already closed. This may indicate a bug. 218s if any(not isinstance(idx, index_type) for idx in indexes.values()): 218s 218s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b01_1', mode='r', kwargs={'sharing': False}, manager_id='c05fd744-a8ce-4b44-8593-587c94555912'), but file is not already closed. This may indicate a bug. 218s if any(not isinstance(idx, index_type) for idx in indexes.values()): 218s 218s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b02_1', mode='r', kwargs={'sharing': False}, manager_id='6335de9c-a285-4e1d-93ef-08c3dec4755c'), but file is not already closed. This may indicate a bug. 218s if any(not isinstance(idx, index_type) for idx in indexes.values()): 218s 218s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b03_1', mode='r', kwargs={'sharing': False}, manager_id='92327f21-056b-46e6-9e72-56bec8753631'), but file is not already closed. This may indicate a bug. 218s if any(not isinstance(idx, index_type) for idx in indexes.values()): 218s 218s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b04_1', mode='r', kwargs={'sharing': False}, manager_id='52b84686-052c-4025-a1c8-9cf9caa2ba46'), but file is not already closed. This may indicate a bug. 218s if any(not isinstance(idx, index_type) for idx in indexes.values()): 218s 218s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b05_1', mode='r', kwargs={'sharing': False}, manager_id='186226b6-ebe6-43b0-b786-473546faa702'), but file is not already closed. This may indicate a bug. 218s if any(not isinstance(idx, index_type) for idx in indexes.values()): 218s 218s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b06_1', mode='r', kwargs={'sharing': False}, manager_id='e47673ce-8eda-4146-9c98-a5ee0b74e45d'), but file is not already closed. This may indicate a bug. 218s if any(not isinstance(idx, index_type) for idx in indexes.values()): 218s 218s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b07_1', mode='r', kwargs={'sharing': False}, manager_id='841351f1-e108-42dd-ab94-3402b06ddf14'), but file is not already closed. This may indicate a bug. 218s if any(not isinstance(idx, index_type) for idx in indexes.values()): 218s 218s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:QC_500m_1', mode='r', kwargs={'sharing': False}, manager_id='7439ab83-caec-484b-b080-af0a21d22e2e'), but file is not already closed. This may indicate a bug. 218s if any(not isinstance(idx, index_type) for idx in indexes.values()): 218s 218s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 218s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:obscov_500m_1', mode='r', kwargs={'sharing': False}, manager_id='790693bc-6d5f-4339-8867-e8dc5478be83'), but file is not already closed. This may indicate a bug. 218s if any(not isinstance(idx, index_type) for idx in indexes.values()): 218s 218s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 218s === 440 passed, 44 deselected, 4 xfailed, 3 xpassed, 410 warnings in 12.87s ==== 218s I: pybuild base:311: cd /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build; python3.13 -m pytest -k "not test_clip_geojson__no_drop and not test_clip_geojson and not test_interpolate_na and not test_merge_datasets and not test_open_rasterio_mask_chunk_clip and not test_to_raster__different_dtype and not test_nonstandard_dims_write_coordinate_system__projected_ft" 220s ============================= test session starts ============================== 220s platform linux -- Python 3.13.1, pytest-8.3.4, pluggy-1.5.0 220s rootdir: /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build 220s configfile: pyproject.toml 220s plugins: timeout-2.3.1, cov-5.0.0, typeguard-4.4.1 220s collected 491 items / 44 deselected / 447 selected 220s 220s test/integration/test_integration__io.py ............................... [ 6%] 226s .............Xx...x............................................ [ 21%] 226s test/integration/test_integration__io_uri_manager.py ........ [ 22%] 226s test/integration/test_integration_merge.py ..xx. [ 23%] 226s test/integration/test_integration_rioxarray.py ......................... [ 29%] 228s ........................................................................ [ 45%] 229s ........................................................................ [ 61%] 231s ..............................................XX........................ [ 77%] 231s ........................................................................ [ 93%] 231s ............ [ 96%] 232s test/integration/test_integration_xarray_plugin.py ...... [ 97%] 232s test/unit/test_options.py .... [ 98%] 232s test/unit/test_show_versions.py .... [ 99%] 232s test/unit/test_unit_reproject_match.py . [100%] 232s 232s =============================== warnings summary =============================== 232s test/integration/test_integration__io.py: 20 warnings 232s test/integration/test_integration_rioxarray.py: 178 warnings 232s /usr/lib/python3/dist-packages/rioxarray/_io.py:521: DeprecationWarning: string or file could not be read to its end due to unmatched data; this will raise a ValueError in the future. 232s new_val = numpy.fromstring(value.strip("{}"), dtype="float", sep=",") 232s 232s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 232s /usr/lib/python3/dist-packages/xarray/core/alignment.py:916: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:granule_pnt_1', mode='r', kwargs={'sharing': False}, manager_id='b62f9eb4-431e-4d13-9489-d20d881adb0e'), but file is not already closed. This may indicate a bug. 232s for position, variables in enumerate(objects): 232s 232s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 232s /usr/lib/python3/dist-packages/xarray/core/alignment.py:916: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:num_observations_1km', mode='r', kwargs={'sharing': False}, manager_id='b85c787c-1b52-4565-b216-9e8f88463524'), but file is not already closed. This may indicate a bug. 232s for position, variables in enumerate(objects): 232s 232s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 232s /usr/lib/python3/dist-packages/xarray/core/alignment.py:916: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:state_1km_1', mode='r', kwargs={'sharing': False}, manager_id='88298372-e0f2-4ad8-95cf-91ac165dd8bb'), but file is not already closed. This may indicate a bug. 232s for position, variables in enumerate(objects): 232s 232s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 232s /usr/lib/python3/dist-packages/xarray/core/alignment.py:916: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SensorZenith_1', mode='r', kwargs={'sharing': False}, manager_id='77529d6e-e712-4410-bc1c-503517c72c87'), but file is not already closed. This may indicate a bug. 232s for position, variables in enumerate(objects): 232s 232s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 232s /usr/lib/python3/dist-packages/xarray/core/alignment.py:916: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SensorAzimuth_1', mode='r', kwargs={'sharing': False}, manager_id='6224e37e-61bc-4334-be22-8d2b6ef02630'), but file is not already closed. This may indicate a bug. 232s for position, variables in enumerate(objects): 232s 232s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 232s /usr/lib/python3/dist-packages/xarray/core/alignment.py:916: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:Range_1', mode='r', kwargs={'sharing': False}, manager_id='c6df73a8-fe35-40bd-a61d-bebea3cdef4b'), but file is not already closed. This may indicate a bug. 232s for position, variables in enumerate(objects): 232s 232s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 232s /usr/lib/python3/dist-packages/xarray/core/alignment.py:916: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SolarZenith_1', mode='r', kwargs={'sharing': False}, manager_id='8fc17144-a507-450a-a680-603d705bdcd8'), but file is not already closed. This may indicate a bug. 232s for position, variables in enumerate(objects): 232s 232s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 232s /usr/lib/python3/dist-packages/xarray/core/alignment.py:916: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SolarAzimuth_1', mode='r', kwargs={'sharing': False}, manager_id='d0f3c74f-02d0-4ad1-aac1-cd90c9cd33f2'), but file is not already closed. This may indicate a bug. 232s for position, variables in enumerate(objects): 232s 232s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 232s /usr/lib/python3/dist-packages/xarray/core/alignment.py:916: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:gflags_1', mode='r', kwargs={'sharing': False}, manager_id='2833609e-fb14-44c4-a5f4-49aa222ed794'), but file is not already closed. This may indicate a bug. 232s for position, variables in enumerate(objects): 232s 232s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 232s /usr/lib/python3/dist-packages/xarray/core/alignment.py:916: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:orbit_pnt_1', mode='r', kwargs={'sharing': False}, manager_id='f69f46f4-04f8-4198-8c7c-0562b560f51b'), but file is not already closed. This may indicate a bug. 232s for position, variables in enumerate(objects): 232s 232s test/integration/test_integration__io.py::test_serialization 232s :488: RuntimeWarning: numpy.ndarray size changed, may indicate binary incompatibility. Expected 16 from C header, got 96 from PyObject 232s 232s test/integration/test_integration__io.py: 13 warnings 232s test/integration/test_integration_rioxarray.py: 40 warnings 232s /usr/lib/python3/dist-packages/rioxarray/_io.py:939: DeprecationWarning: Supplying chunks as dimension-order tuples is deprecated. It will raise an error in the future. Instead use a dict with dimension names as keys. 232s return result.chunk(chunks, name_prefix=name_prefix, token=token) 232s 232s test/integration/test_integration__io.py: 24 warnings 232s /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/integration/test_integration__io.py:502: DeprecationWarning: dropping variables using `drop` is deprecated; use drop_vars. 232s raster_ds[band_name], expected.sel(band=band).drop("band") 232s 232s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-True] 232s /usr/lib/python3/dist-packages/_pytest/python.py:159: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras0/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='184faba5-24d6-45ef-b058-ae43d6a326d5'), but file is not already closed. This may indicate a bug. 232s result = testfunction(**testargs) 232s 232s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 232s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 232s /usr/lib/python3/dist-packages/xarray/core/dataset.py:282: UserWarning: The specified chunks separate the stored chunks along dimension "y" starting at index 1. This could degrade performance. Instead, consider rechunking after loading. 232s warnings.warn( 232s 232s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 232s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 232s /usr/lib/python3/dist-packages/xarray/core/dataset.py:282: UserWarning: The specified chunks separate the stored chunks along dimension "x" starting at index 1. This could degrade performance. Instead, consider rechunking after loading. 232s warnings.warn( 232s 232s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 232s /usr/lib/python3/dist-packages/dask/_task_spec.py:514: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpizaog1ab/temp-4.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='f80b29af-af13-44cf-b3cd-06967a0c4d47'), but file is not already closed. This may indicate a bug. 232s self._dependencies = frozenset((self.target,)) 232s 232s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 232s /usr/lib/python3/dist-packages/dask/_task_spec.py:514: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpizaog1ab/temp-4.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='195a241f-0acf-4dd2-ad94-65adfe3711f1'), but file is not already closed. This may indicate a bug. 232s self._dependencies = frozenset((self.target,)) 232s 232s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 232s /usr/lib/python3/dist-packages/dask/_task_spec.py:514: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpizaog1ab/temp-4.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='2afe87fa-81f1-49d8-ab24-7b6c934b31f9'), but file is not already closed. This may indicate a bug. 232s self._dependencies = frozenset((self.target,)) 232s 232s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 232s /usr/lib/python3/dist-packages/dask/_task_spec.py:514: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras1/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='e97de645-0e3d-4095-9cdb-7af64d4a09ba'), but file is not already closed. This may indicate a bug. 232s self._dependencies = frozenset((self.target,)) 232s 232s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 232s /usr/lib/python3/dist-packages/dask/_task_spec.py:514: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras1/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='455bfd14-d38c-4119-9829-ed6e925a9c12'), but file is not already closed. This may indicate a bug. 232s self._dependencies = frozenset((self.target,)) 232s 232s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 232s /usr/lib/python3/dist-packages/dask/_task_spec.py:514: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras1/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='5385379c-e282-49a4-bc39-79d2c43b5f06'), but file is not already closed. This may indicate a bug. 232s self._dependencies = frozenset((self.target,)) 232s 232s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 232s /usr/lib/python3/dist-packages/dask/_task_spec.py:514: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras0/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='912d9a00-2994-414c-b213-657e1b93efbd'), but file is not already closed. This may indicate a bug. 232s self._dependencies = frozenset((self.target,)) 232s 232s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 232s /usr/lib/python3/dist-packages/dask/_task_spec.py:514: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras0/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='918c2890-f452-4928-b5b8-57a533f8a1c1'), but file is not already closed. This may indicate a bug. 232s self._dependencies = frozenset((self.target,)) 232s 232s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 232s /usr/lib/python3/dist-packages/_pytest/python.py:159: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras2/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='a12808a5-ad67-4e23-8297-784a6ddade14'), but file is not already closed. This may indicate a bug. 232s result = testfunction(**testargs) 232s 232s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 232s /usr/lib/python3/dist-packages/_pytest/python.py:159: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras2/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='d955d6ff-4977-4203-a0e3-c015aef7d3cc'), but file is not already closed. This may indicate a bug. 232s result = testfunction(**testargs) 232s 232s test/integration/test_integration__io.py: 8 warnings 232s test/integration/test_integration_rioxarray.py: 2 warnings 232s /usr/lib/python3/dist-packages/rasterio/__init__.py:366: NotGeoreferencedWarning: Dataset has no geotransform, gcps, or rpcs. The identity matrix will be returned. 232s dataset = writer( 232s 232s test/integration/test_integration__io.py::test_notransform 232s test/integration/test_integration__io.py::test_mask_and_scale__unicode[open_rasterio] 232s test/integration/test_integration__io.py::test_mask_and_scale__unicode[open_rasterio1] 232s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio] 232s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio1] 232s /usr/lib/python3/dist-packages/rioxarray/_io.py:1143: NotGeoreferencedWarning: Dataset has no geotransform, gcps, or rpcs. The identity matrix will be returned. 232s warnings.warn(str(rio_warning.message), type(rio_warning.message)) # type: ignore 232s 232s test/integration/test_integration__io.py::test_chunks 232s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpkclyv16p/temp-3.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='ef16a03d-6d84-472c-a525-b8f066468e0d'), but file is not already closed. This may indicate a bug. 232s if any(not isinstance(idx, index_type) for idx in indexes.values()): 232s 232s test/integration/test_integration__io.py::test_chunks 232s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpkclyv16p/temp-3.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='a145fd21-e8aa-47e2-a250-7c69d1ee3080'), but file is not already closed. This may indicate a bug. 232s if any(not isinstance(idx, index_type) for idx in indexes.values()): 232s 232s test/integration/test_integration__io.py::test_chunks 232s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpkclyv16p/temp-3.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='1e8b9b6c-be8b-4f36-ab22-f47539a30db6'), but file is not already closed. This may indicate a bug. 232s if any(not isinstance(idx, index_type) for idx in indexes.values()): 232s 232s test/integration/test_integration__io.py::test_chunks 232s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpqaho_lvm/temp-5.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='01e31cb8-7311-4171-8bad-9a50bfdd4f84'), but file is not already closed. This may indicate a bug. 232s if any(not isinstance(idx, index_type) for idx in indexes.values()): 232s 232s test/integration/test_integration__io.py::test_chunks 232s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpqaho_lvm/temp-5.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='ce4a153f-1ffb-4a71-a395-10ea4c30140f'), but file is not already closed. This may indicate a bug. 232s if any(not isinstance(idx, index_type) for idx in indexes.values()): 232s 232s test/integration/test_integration__io.py::test_chunks 232s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpqaho_lvm/temp-5.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='bc66b241-1a24-42b3-bbd2-7b6234539367'), but file is not already closed. This may indicate a bug. 232s if any(not isinstance(idx, index_type) for idx in indexes.values()): 232s 232s test/integration/test_integration__io.py::test_chunks 232s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras2/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='9399c87b-e5b1-4a9a-9e7e-050c6c37bb11'), but file is not already closed. This may indicate a bug. 232s if any(not isinstance(idx, index_type) for idx in indexes.values()): 232s 232s test/integration/test_integration__io.py::test_chunks 232s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp924td48k/temp-6.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='38fc70fa-e7a5-47eb-9b6a-152d3b0a3502'), but file is not already closed. This may indicate a bug. 232s if any(not isinstance(idx, index_type) for idx in indexes.values()): 232s 232s test/integration/test_integration__io.py::test_chunks 232s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp924td48k/temp-6.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='5589bb9e-01c9-4079-98e3-cbcfb8c49293'), but file is not already closed. This may indicate a bug. 232s if any(not isinstance(idx, index_type) for idx in indexes.values()): 232s 232s test/integration/test_integration__io.py::test_chunks 232s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp924td48k/temp-6.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='9538bbd1-7dce-4acd-af81-247b1a1dce0f'), but file is not already closed. This may indicate a bug. 232s if any(not isinstance(idx, index_type) for idx in indexes.values()): 232s 232s test/integration/test_integration__io.py::test_chunks 232s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras3/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='3983d316-1184-45b6-945c-8cfd9e8fa135'), but file is not already closed. This may indicate a bug. 232s if any(not isinstance(idx, index_type) for idx in indexes.values()): 232s 232s test/integration/test_integration__io.py::test_chunks 232s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras3/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='035b0c76-7f40-458f-b55d-09d8f9ea1a16'), but file is not already closed. This may indicate a bug. 232s if any(not isinstance(idx, index_type) for idx in indexes.values()): 232s 232s test/integration/test_integration__io.py::test_chunks 232s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras3/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='1d369553-751a-4362-87d2-629d60f9c869'), but file is not already closed. This may indicate a bug. 232s if any(not isinstance(idx, index_type) for idx in indexes.values()): 232s 232s test/integration/test_integration__io.py::test_mask_and_scale[open_rasterio] 232s /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/integration/test_integration__io.py:1100: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 232s with open_rasterio(test_file, mask_and_scale=True) as rds: 232s 232s test/integration/test_integration__io.py::test_mask_and_scale[open_rasterio1] 232s test/integration/test_integration__io.py::test_mask_and_scale__to_raster[open_rasterio1] 232s /usr/lib/python3/dist-packages/rioxarray/xarray_plugin.py:59: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 232s rds = _io.open_rasterio( 232s 232s test/integration/test_integration__io.py::test_mask_and_scale__to_raster[open_rasterio] 232s /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/integration/test_integration__io.py:1172: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 232s with open_rasterio(test_file, mask_and_scale=True) as rds: 232s 232s test/integration/test_integration__io.py::test_mask_and_scale__unicode[open_rasterio] 232s /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/integration/test_integration__io.py:1185: SerializationWarning: variable 'LST' has _Unsigned attribute but is not of integer type. Ignoring attribute. 232s with open_rasterio(test_file, mask_and_scale=True) as rds: 232s 232s test/integration/test_integration__io.py::test_mask_and_scale__unicode[open_rasterio1] 232s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio1] 232s /usr/lib/python3/dist-packages/rioxarray/xarray_plugin.py:59: SerializationWarning: variable 'LST' has _Unsigned attribute but is not of integer type. Ignoring attribute. 232s rds = _io.open_rasterio( 232s 232s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio] 232s /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/integration/test_integration__io.py:1205: SerializationWarning: variable 'LST' has _Unsigned attribute but is not of integer type. Ignoring attribute. 232s with open_rasterio(test_file, mask_and_scale=True) as rds: 232s 232s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio] 232s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio1] 232s test/integration/test_integration__io.py::test_writing_gcps 232s /usr/lib/python3/dist-packages/rasterio/__init__.py:366: NotGeoreferencedWarning: The given matrix is equal to Affine.identity or its flipped counterpart. GDAL may ignore this matrix and save no geotransform without raising an error. This behavior is somewhat driver-specific. 232s dataset = writer( 232s 232s test/integration/test_integration__io.py::test_lockless 232s /usr/lib/python3/dist-packages/dask/_task_spec.py:902: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp0vue9k4i/temp-21.tif', mode='r', kwargs={'sharing': False}, manager_id='24841ccf-6d49-449e-b53f-6bcbc82f7869'), but file is not already closed. This may indicate a bug. 232s def __getitem__(self, key): 232s 232s test/integration/test_integration__io.py::test_lockless 232s /usr/lib/python3/dist-packages/dask/_task_spec.py:902: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpk9os3yp7/temp-22.tif', mode='r', kwargs={'sharing': False}, manager_id='690608bd-4ed3-4982-89d4-6fb6c0e7f67b'), but file is not already closed. This may indicate a bug. 232s def __getitem__(self, key): 232s 232s test/integration/test_integration__io.py::test_cint16_dtype[None] 232s test/integration/test_integration__io.py::test_cint16_dtype[complex_int16] 232s test/integration/test_integration__io.py::test_cint16_dtype_nodata 232s test/integration/test_integration__io.py::test_cint16_dtype_masked[None] 232s test/integration/test_integration__io.py::test_cint16_dtype_masked[complex_int16] 232s test/integration/test_integration__io.py::test_cint16_promote_dtype 232s test/integration/test_integration__io.py::test_cint16_promote_dtype 232s /usr/lib/python3/dist-packages/rasterio/__init__.py:256: ComplexWarning: Casting complex values to real discards the imaginary part 232s nodata = float(nodata) 232s 232s test/integration/test_integration_rioxarray.py::test_reproject_match__rotated 232s test/integration/test_integration_rioxarray.py::test_reproject_match__rotated 232s /usr/lib/python3/dist-packages/rioxarray/rioxarray.py:696: UserWarning: Transform that is non-rectilinear or with rotation found. Unable to recalculate. 232s warnings.warn( 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-True-True-open_method2] 232s /usr/lib/python3/dist-packages/dask/_task_spec.py:655: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='ce7d0261-59cd-4bc2-9df5-cf089800b285'), but file is not already closed. This may indicate a bug. 232s for a in itertools.chain(self.args, self.kwargs.values()): 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-True-True-open_method4] 232s /usr/lib/python3.13/copy.py:246: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='7dee6692-ad38-40fb-a4e4-780d922ac157'), but file is not already closed. This may indicate a bug. 232s memo[id(memo)]=[x] 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock1-False-True-True-open_method2] 232s /usr/lib/python3/dist-packages/dask/blockwise.py:570: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='7ba1d8b1-535e-48eb-a23a-933c55b57b7c'), but file is not already closed. This may indicate a bug. 232s _tmp_indices.append((name, tuple(ind) if ind is not None else ind)) 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock1-False-True-True-open_method2] 232s /usr/lib/python3/dist-packages/dask/blockwise.py:570: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='0d278ae4-ae43-4c32-854a-e95352cf57cb'), but file is not already closed. This may indicate a bug. 232s _tmp_indices.append((name, tuple(ind) if ind is not None else ind)) 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock1-False-True-True-open_method2] 232s /usr/lib/python3/dist-packages/dask/blockwise.py:570: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='ae6092df-e945-4811-9ef8-00e6a38d56ea'), but file is not already closed. This may indicate a bug. 232s _tmp_indices.append((name, tuple(ind) if ind is not None else ind)) 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock1-False-True-True-open_method4] 232s /usr/lib/python3.13/copy.py:253: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='e3a8c2fa-5976-41a5-a072-1d1f35ed7dba'), but file is not already closed. This may indicate a bug. 232s args = (deepcopy(arg, memo) for arg in args) 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock1-False-True-True-open_method4] 232s /usr/lib/python3.13/copy.py:253: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='4cb122aa-a045-4295-8282-adaf2e6a33dd'), but file is not already closed. This may indicate a bug. 232s args = (deepcopy(arg, memo) for arg in args) 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock1-False-True-True-open_method4] 232s /usr/lib/python3.13/copy.py:253: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='234d0388-024d-41e5-93e2-7f09ce5af4a6'), but file is not already closed. This may indicate a bug. 232s args = (deepcopy(arg, memo) for arg in args) 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock1-False-True-True-open_method4] 232s /usr/lib/python3.13/copy.py:253: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='6d5773c7-e1a0-4ec9-8150-3c7aafcbb311'), but file is not already closed. This may indicate a bug. 232s args = (deepcopy(arg, memo) for arg in args) 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock1-False-True-True-open_method4] 232s /usr/lib/python3.13/copy.py:253: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='1f68139a-344c-490e-b597-effd69a10d17'), but file is not already closed. This may indicate a bug. 232s args = (deepcopy(arg, memo) for arg in args) 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock1-False-True-True-open_method4] 232s /usr/lib/python3.13/copy.py:253: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='4cf2c5fe-7816-4916-8ff1-b41b0aa910a5'), but file is not already closed. This may indicate a bug. 232s args = (deepcopy(arg, memo) for arg in args) 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock1-False-False-False-open_method2] 232s /usr/lib/python3/dist-packages/dask/order.py:438: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='8e32abb4-8153-448a-b2e6-b7d6d9001f09'), but file is not already closed. This may indicate a bug. 232s def use_longest_path() -> bool: 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock1-False-False-False-open_method2] 232s /usr/lib/python3/dist-packages/dask/order.py:438: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='bd53c9e7-a7d2-4e74-b37e-f2cee33473dc'), but file is not already closed. This may indicate a bug. 232s def use_longest_path() -> bool: 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-True-True-open_method1] 232s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1901: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='821e7172-98be-4699-b7b2-439965433cf3'), but file is not already closed. This may indicate a bug. 232s del filtered_indexes[k] 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-True-True-open_method1] 232s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1901: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='cb53faf6-f993-4141-8860-acb24c166448'), but file is not already closed. This may indicate a bug. 232s del filtered_indexes[k] 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-True-True-open_method1] 232s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1901: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='df3200a2-ec3a-4a59-9fd0-efbeb32994e2'), but file is not already closed. This may indicate a bug. 232s del filtered_indexes[k] 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-True-True-open_method3] 232s /usr/lib/python3/dist-packages/dask/order.py:179: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='1a1e4f0a-dc3c-4d97-b493-a5cbd4c380e2'), but file is not already closed. This may indicate a bug. 232s requires_data_task[dep].add(root) 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-False-False-open_method2] 232s /usr/lib/python3/dist-packages/dask/_task_spec.py:655: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='7f889c16-8349-4dab-aa6b-d1d5d34fe44d'), but file is not already closed. This may indicate a bug. 232s for a in itertools.chain(self.args, self.kwargs.values()): 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-False-False-open_method2] 232s /usr/lib/python3/dist-packages/dask/_task_spec.py:655: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='f08b8037-d54b-487f-8014-1ecbe8e48ae3'), but file is not already closed. This may indicate a bug. 232s for a in itertools.chain(self.args, self.kwargs.values()): 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-False-False-open_method2] 232s /usr/lib/python3/dist-packages/dask/_task_spec.py:655: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='88aacb33-52c8-48d8-8e78-14ced30fb676'), but file is not already closed. This may indicate a bug. 232s for a in itertools.chain(self.args, self.kwargs.values()): 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster_3d[None-False-True-open_method1] 232s :873: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='4c954506-1dc8-46f1-b2d8-32c66a86c7c9'), but file is not already closed. This may indicate a bug. 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster_3d[None-False-True-open_method1] 232s :873: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='8a847117-cb99-46c2-80f5-cc910ff18c7e'), but file is not already closed. This may indicate a bug. 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster_3d[None-False-True-open_method3] 232s /usr/lib/python3.13/contextlib.py:145: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='744a8a67-00f1-4389-a496-f4a003210d4f'), but file is not already closed. This may indicate a bug. 232s def __exit__(self, typ, value, traceback): 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock1-False-True-open_method4] 232s /usr/lib/python3.13/contextlib.py:450: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='dbba7def-79d3-45c4-89cd-7b2a137cdb5a'), but file is not already closed. This may indicate a bug. 232s def __exit__(self, exctype, excinst, exctb): 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-True-open_method0] 232s :873: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='e43248c2-cb37-4d2a-a1b5-684ebfd2fb0d'), but file is not already closed. This may indicate a bug. 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-True-open_method0] 232s :873: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='0c85cc69-1e25-4704-9361-a5c0ed0de2d1'), but file is not already closed. This may indicate a bug. 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-True-open_method0] 232s :873: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='059c908a-a7e7-4095-af01-d8d63c3285de'), but file is not already closed. This may indicate a bug. 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-True-open_method0] 232s :873: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='2d1aeff7-2c89-401c-8014-c3316aa45253'), but file is not already closed. This may indicate a bug. 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-True-open_method0] 232s :873: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='5a89ee2e-a72d-4190-821e-5c19046ecfe3'), but file is not already closed. This may indicate a bug. 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-True-open_method0] 232s :873: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='ca5451f0-8257-4dfe-82cb-4d94a40a4bd5'), but file is not already closed. This may indicate a bug. 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-True-open_method0] 232s :873: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='faad1e55-7ce0-45fa-95a3-3e9a20642f99'), but file is not already closed. This may indicate a bug. 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-True-open_method0] 232s :873: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='d78e2bbe-afc2-4eb6-bc81-54e1531c08a7'), but file is not already closed. This may indicate a bug. 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-True-open_method0] 232s :873: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='beedbd65-b8c1-4d17-8b74-ee9cbedd58a5'), but file is not already closed. This may indicate a bug. 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-True-open_method0] 232s :873: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='6f2c0f35-7f42-423e-b72d-c6ac51262792'), but file is not already closed. This may indicate a bug. 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-True-open_method3] 232s /usr/lib/python3/dist-packages/pandas/core/base.py:862: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='233ddc2f-287f-4ac5-b6eb-0940d5764d0f'), but file is not already closed. This may indicate a bug. 232s return map(self._values.item, range(self._values.size)) 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-False-open_method1] 232s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='c1dc5eea-2e3c-4dec-abeb-663b14c92a70'), but file is not already closed. This may indicate a bug. 232s if any(not isinstance(idx, index_type) for idx in indexes.values()): 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-False-open_method3] 232s /usr/lib/python3/dist-packages/dask/_task_spec.py:655: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='18e90911-0b7a-412f-bfa9-04b3bc84fea0'), but file is not already closed. This may indicate a bug. 232s for a in itertools.chain(self.args, self.kwargs.values()): 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[True] 232s /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/integration/test_integration_rioxarray.py:1803: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 232s with rioxarray.open_rasterio( 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[True] 232s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[False] 232s /usr/lib/python3/dist-packages/rioxarray/_io.py:672: UserWarning: Offsets differ across bands. The 'scale_factor' attribute will not be added. See the 'scales' attribute. 232s warnings.warn( 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[True] 232s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[False] 232s /usr/lib/python3/dist-packages/rioxarray/_io.py:681: UserWarning: Offsets differ across bands. The 'add_offset' attribute will not be added. See the 'offsets' attribute. 232s warnings.warn( 232s 232s test/integration/test_integration_rioxarray.py::test_to_raster__dataset__mask_and_scale[True-True] 232s test/integration/test_integration_rioxarray.py::test_to_raster__dataset__mask_and_scale[None-True] 232s /tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/integration/test_integration_rioxarray.py:1897: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 232s with rioxarray.open_rasterio( 232s 232s test/integration/test_integration_rioxarray.py::test_write_nodata__array__copy 232s /usr/lib/python3.13/copy.py:221: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/test_find_crs.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='43ab30a2-2015-4d19-b488-ba468b50db80'), but file is not already closed. This may indicate a bug. 232s for key, value in x.items(): 232s 232s test/integration/test_integration_xarray_plugin.py::test_xarray_open_dataset[kwargs1] 232s /usr/lib/python3/dist-packages/xarray/core/alignment.py:524: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='553c0c9a-75b4-450b-9042-a9767e625377'), but file is not already closed. This may indicate a bug. 232s for key, aligned_idx in self.aligned_indexes.items(): 232s 232s test/integration/test_integration_xarray_plugin.py::test_xarray_open_dataset[kwargs1] 232s /usr/lib/python3/dist-packages/xarray/core/alignment.py:524: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/cog.tif', mode='r', kwargs={'sharing': False}, manager_id='2bb3bbe4-a68c-49a7-9d85-f1b87f680f73'), but file is not already closed. This may indicate a bug. 232s for key, aligned_idx in self.aligned_indexes.items(): 232s 232s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 232s :823: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/cog.tif', mode='r', kwargs={'sharing': False}, manager_id='e20a6138-2e38-4f2e-8c33-4e1654eebc65'), but file is not already closed. This may indicate a bug. 232s 232s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 232s :823: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:num_observations_500m', mode='r', kwargs={'sharing': False}, manager_id='23627522-6b32-4015-9df8-fca7e1a11176'), but file is not already closed. This may indicate a bug. 232s 232s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 232s :823: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b01_1', mode='r', kwargs={'sharing': False}, manager_id='f88a5049-7780-4d76-94b7-10c9957198f0'), but file is not already closed. This may indicate a bug. 232s 232s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 232s :823: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b02_1', mode='r', kwargs={'sharing': False}, manager_id='325ad904-abdd-4995-bbdd-015a2cf72442'), but file is not already closed. This may indicate a bug. 232s 232s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 232s :823: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b03_1', mode='r', kwargs={'sharing': False}, manager_id='8a743ffc-4e17-4ac5-8ad7-86a929d203d1'), but file is not already closed. This may indicate a bug. 232s 232s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 232s :823: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b04_1', mode='r', kwargs={'sharing': False}, manager_id='eda0236c-1d7c-4c26-930d-ba783c9c2fae'), but file is not already closed. This may indicate a bug. 232s 232s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 232s :823: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b05_1', mode='r', kwargs={'sharing': False}, manager_id='c9b9dea8-93fc-401c-90f8-2aaec2da873b'), but file is not already closed. This may indicate a bug. 232s 232s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 232s :823: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b06_1', mode='r', kwargs={'sharing': False}, manager_id='326e5bcc-c07f-4f6c-964e-982b72111690'), but file is not already closed. This may indicate a bug. 232s 232s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 232s :823: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b07_1', mode='r', kwargs={'sharing': False}, manager_id='3da266f2-8f96-444e-b907-569091c4dbcd'), but file is not already closed. This may indicate a bug. 232s 232s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 232s :823: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:QC_500m_1', mode='r', kwargs={'sharing': False}, manager_id='81632ab8-8a9b-4f8b-9f7f-43b9addb4589'), but file is not already closed. This may indicate a bug. 232s 232s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 232s :823: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:obscov_500m_1', mode='r', kwargs={'sharing': False}, manager_id='82881279-0913-4e35-8f0a-9c2b9b96ced7'), but file is not already closed. This may indicate a bug. 232s 232s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 232s :823: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.XygVPm/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:iobs_res_1', mode='r', kwargs={'sharing': False}, manager_id='b2295671-de91-461e-bc47-16933b612654'), but file is not already closed. This may indicate a bug. 232s 232s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 232s === 440 passed, 44 deselected, 4 xfailed, 3 xpassed, 410 warnings in 12.70s ==== 232s autopkgtest [09:34:02]: test pybuild-autopkgtest: -----------------------] 233s autopkgtest [09:34:03]: test pybuild-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 233s pybuild-autopkgtest PASS 233s autopkgtest [09:34:03]: @@@@@@@@@@@@@@@@@@@@ summary 233s pybuild-autopkgtest PASS 362s nova [W] Skipping flock for amd64 362s Creating nova instance adt-plucky-amd64-python-rioxarray-20250117-093010-juju-7f2275-prod-proposed-migration-environment-15-f742bbbb-6e72-4e85-b55a-904c55510d6f from image adt/ubuntu-plucky-amd64-server-20250117.img (UUID 8f35863a-398a-4b7d-9594-544c7b7656c3)... 362s nova [W] Timed out waiting for 58ec417b-ce4c-4f2c-8004-9445ca23d0cb to get deleted.