0s autopkgtest [12:17:30]: starting date and time: 2024-12-04 12:17:30+0000 0s autopkgtest [12:17:30]: git checkout: 48af33f0 Fix --add-apt-source=ppa for focal 0s autopkgtest [12:17:30]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.wo_6wbdt/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:rasterio --apt-upgrade python-rioxarray --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=rasterio/1.4.3-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-25.secgroup --name adt-plucky-amd64-python-rioxarray-20241204-121729-juju-7f2275-prod-proposed-migration-environment-15-238a6aa7-8101-456c-b715-d232dda9ff41 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 46s autopkgtest [12:18:16]: testbed dpkg architecture: amd64 47s autopkgtest [12:18:17]: testbed apt version: 2.9.16 47s autopkgtest [12:18:17]: @@@@@@@@@@@@@@@@@@@@ test bed setup 47s autopkgtest [12:18:17]: testbed release detected to be: None 48s autopkgtest [12:18:18]: updating testbed package index (apt update) 48s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 48s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 48s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 49s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 49s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 49s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [14.2 kB] 49s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [55.9 kB] 49s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [745 kB] 49s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [130 kB] 49s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [81.0 kB] 49s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [40.6 kB] 49s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/restricted i386 Packages [2572 B] 49s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [229 kB] 49s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [623 kB] 49s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [6364 B] 49s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [21.4 kB] 50s Fetched 2033 kB in 2s (1308 kB/s) 50s Reading package lists... 51s Reading package lists... 51s Building dependency tree... 51s Reading state information... 51s Calculating upgrade... 52s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 52s Reading package lists... 52s Building dependency tree... 52s Reading state information... 52s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 52s autopkgtest [12:18:22]: upgrading testbed (apt dist-upgrade and autopurge) 52s Reading package lists... 52s Building dependency tree... 52s Reading state information... 53s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 53s Starting 2 pkgProblemResolver with broken count: 0 53s Done 53s Entering ResolveByKeep 53s 53s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 54s Reading package lists... 54s Building dependency tree... 54s Reading state information... 54s Starting pkgProblemResolver with broken count: 0 54s Starting 2 pkgProblemResolver with broken count: 0 54s Done 54s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 57s autopkgtest [12:18:27]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 13:41:20 UTC 2024 58s autopkgtest [12:18:28]: @@@@@@@@@@@@@@@@@@@@ apt-source python-rioxarray 61s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-rioxarray 0.18.1-1 (dsc) [2502 B] 61s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-rioxarray 0.18.1-1 (tar) [4573 kB] 61s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-rioxarray 0.18.1-1 (diff) [3900 B] 61s gpgv: Signature made Sat Nov 9 16:39:18 2024 UTC 61s gpgv: using RSA key 3B70F209A5FFD68903C472C5EBF48AB2578F9812 61s gpgv: issuer "antonio.valentino@tiscali.it" 61s gpgv: Can't check signature: No public key 61s dpkg-source: warning: cannot verify inline signature for ./python-rioxarray_0.18.1-1.dsc: no acceptable signature found 61s autopkgtest [12:18:31]: testing package python-rioxarray version 0.18.1-1 61s autopkgtest [12:18:31]: build not needed 62s autopkgtest [12:18:32]: test pybuild-autopkgtest: preparing testbed 62s Reading package lists... 62s Building dependency tree... 62s Reading state information... 63s Starting pkgProblemResolver with broken count: 0 63s Starting 2 pkgProblemResolver with broken count: 0 63s Done 63s The following NEW packages will be installed: 63s autoconf automake autopoint autotools-dev build-essential cpp cpp-14 63s cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu debhelper debugedit 63s dh-autoreconf dh-python dh-strip-nondeterminism dwz fontconfig-config 63s fonts-dejavu-core fonts-dejavu-mono g++ g++-14 g++-14-x86-64-linux-gnu 63s g++-x86-64-linux-gnu gcc gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu 63s gdal-data gdal-plugins gettext intltool-debian libaec0 libaom3 63s libarchive-zip-perl libarmadillo14 libarpack2t64 libasan8 libblas3 libblosc1 63s libcc1-0 libcfitsio10t64 libde265-0 libdebhelper-perl libdeflate0 63s libfile-stripnondeterminism-perl libfontconfig1 libfreexl1 libfyba0t64 63s libgcc-14-dev libgdal35 libgeos-c1t64 libgeos3.13.0 libgeotiff5 libgfortran5 63s libgif7 libgomp1 libgpgmepp6t64 libhdf4-0-alt libhdf5-103-1t64 63s libhdf5-hl-100t64 libheif-plugin-aomdec libheif-plugin-libde265 libheif1 63s libhwasan0 libisl23 libitm1 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery 63s libjs-jquery-hotkeys libjs-jquery-isonscreen libjs-jquery-metadata 63s libjs-jquery-tablesorter libjs-jquery-throttle-debounce libkmlbase1t64 63s libkmldom1t64 libkmlengine1t64 liblapack3 liblbfgsb0 liblcms2-2 liblerc4 63s liblsan0 libltdl7 libminizip1t64 libmpc3 libmysqlclient21 libnetcdf19t64 63s libodbc2 libodbcinst2 libogdi4.1 libopenjp2-7 libpoppler140 libpq5 libproj25 63s libpython3.13-minimal libpython3.13-stdlib libqhull-r8.0 libquadmath0 63s librttopo1 libsharpyuv0 libsnappy1v5 libspatialite8t64 libstdc++-14-dev 63s libsz2 libtiff6 libtool libtsan2 libubsan1 liburiparser1 libwebp7 63s libxerces-c3.2t64 m4 mysql-common po-debconf proj-data 63s pybuild-plugin-autopkgtest pybuild-plugin-pyproject python3-affine 63s python3-all python3-build python3-cftime python3-click python3-click-plugins 63s python3-cligj python3-cloudpickle python3-colorama python3-coverage 63s python3-dask python3-dateutil python3-decorator python3-fsspec 63s python3-iniconfig python3-installer python3-locket python3-netcdf4 63s python3-numpy python3-packaging python3-pandas python3-pandas-lib 63s python3-partd python3-pluggy python3-pyproj python3-pyproject-hooks 63s python3-pytest python3-pytest-cov python3-pytest-timeout python3-rasterio 63s python3-rioxarray python3-scipy python3-toml python3-toolz python3-tz 63s python3-wheel python3-xarray python3.13 python3.13-minimal unixodbc-common 63s 0 upgraded, 157 newly installed, 0 to remove and 0 not upgraded. 63s Need to get 165 MB of archives. 63s After this operation, 671 MB of additional disk space will be used. 63s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.0-2 [879 kB] 64s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.0-2 [2188 kB] 65s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 65s Get:4 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-hotkeys all 0~20130707+git2d51e3a9+dfsg-2.1 [11.5 kB] 65s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 m4 amd64 1.4.19-4build1 [244 kB] 65s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 autoconf all 2.72-3 [382 kB] 65s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 autotools-dev all 20220109.1 [44.9 kB] 65s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 automake all 1:1.16.5-1.3ubuntu1 [558 kB] 65s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 autopoint all 0.22.5-2 [616 kB] 65s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 65s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 65s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-9ubuntu1 [11.9 MB] 66s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-9ubuntu1 [1032 B] 66s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [5452 B] 66s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.1.0-2ubuntu1 [22.4 kB] 66s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 14.2.0-9ubuntu1 [47.6 kB] 66s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-9ubuntu1 [148 kB] 66s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 14.2.0-9ubuntu1 [28.9 kB] 66s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 14.2.0-9ubuntu1 [2998 kB] 66s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 14.2.0-9ubuntu1 [1316 kB] 66s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 14.2.0-9ubuntu1 [2732 kB] 67s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 14.2.0-9ubuntu1 [1177 kB] 67s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 14.2.0-9ubuntu1 [1634 kB] 67s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 14.2.0-9ubuntu1 [153 kB] 67s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-9ubuntu1 [2814 kB] 67s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-9ubuntu1 [23.4 MB] 68s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-9ubuntu1 [531 kB] 68s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1214 B] 68s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.1.0-2ubuntu1 [5000 B] 68s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-9ubuntu1 [2482 kB] 68s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-9ubuntu1 [13.4 MB] 68s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-9ubuntu1 [20.1 kB] 68s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [966 B] 68s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.1.0-2ubuntu1 [1100 B] 68s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 68s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebhelper-perl all 13.20ubuntu1 [94.2 kB] 68s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libtool all 2.4.7-8 [166 kB] 68s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 dh-autoreconf all 20 [16.1 kB] 68s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libarchive-zip-perl all 1.68-1 [90.2 kB] 68s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [20.1 kB] 68s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 dh-strip-nondeterminism all 1.14.0-1 [5058 B] 68s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 debugedit amd64 1:5.1-1 [46.9 kB] 69s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 dwz amd64 0.15-1build6 [115 kB] 69s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 gettext amd64 0.22.5-2 [948 kB] 69s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 intltool-debian all 0.35.0+20060710.6 [23.2 kB] 69s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 po-debconf all 1.0.21+nmu1 [233 kB] 69s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 debhelper all 13.20ubuntu1 [893 kB] 69s Get:48 http://ftpmaster.internal/ubuntu plucky/universe amd64 dh-python all 6.20241024 [112 kB] 69s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 69s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 69s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB] 69s Get:52 http://ftpmaster.internal/ubuntu plucky/universe amd64 gdal-data all 3.9.3+dfsg-1build1 [269 kB] 69s Get:53 http://ftpmaster.internal/ubuntu plucky/universe amd64 gdal-plugins amd64 3.9.3+dfsg-1build1 [25.3 kB] 69s Get:54 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 69s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libaom3 amd64 3.11.0-1 [2761 kB] 69s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-4 [332 kB] 69s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-9ubuntu1 [909 kB] 69s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-4 [3177 kB] 69s Get:59 http://ftpmaster.internal/ubuntu plucky/universe amd64 libarpack2t64 amd64 3.9.1-1.1ubuntu1 [107 kB] 69s Get:60 http://ftpmaster.internal/ubuntu plucky/universe amd64 libarmadillo14 amd64 1:14.2.1+dfsg-1 [105 kB] 69s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libsnappy1v5 amd64 1.2.1-1 [30.4 kB] 69s Get:62 http://ftpmaster.internal/ubuntu plucky/universe amd64 libblosc1 amd64 1.21.5+ds-1build1 [36.2 kB] 69s Get:63 http://ftpmaster.internal/ubuntu plucky/universe amd64 libcfitsio10t64 amd64 4.5.0-5 [629 kB] 69s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libde265-0 amd64 1.0.15-1build4 [168 kB] 69s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.22-1 [64.5 kB] 69s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB] 69s Get:67 http://ftpmaster.internal/ubuntu plucky/universe amd64 libfyba0t64 amd64 4.1.1-11build1 [119 kB] 69s Get:68 http://ftpmaster.internal/ubuntu plucky/universe amd64 libminizip1t64 amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [22.9 kB] 69s Get:69 http://ftpmaster.internal/ubuntu plucky/universe amd64 libfreexl1 amd64 2.0.0-1build2 [41.7 kB] 69s Get:70 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeos3.13.0 amd64 3.13.0-1 [1017 kB] 69s Get:71 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeos-c1t64 amd64 3.13.0-1 [103 kB] 69s Get:72 http://ftpmaster.internal/ubuntu plucky/universe amd64 proj-data all 9.5.0-1 [7919 kB] 70s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 70s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 70s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 70s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 70s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [17.5 kB] 70s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.4.0-0.1 [231 kB] 70s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 70s Get:80 http://ftpmaster.internal/ubuntu plucky/universe amd64 libproj25 amd64 9.5.0-1 [1500 kB] 70s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgeotiff5 amd64 1.7.3-1 [63.0 kB] 70s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 libgif7 amd64 5.2.2-1ubuntu1 [35.2 kB] 70s Get:83 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 70s Get:84 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf4-0-alt amd64 4.3.0-1 [285 kB] 70s Get:85 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-103-1t64 amd64 1.10.10+repack-4ubuntu3 [1280 kB] 70s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif-plugin-aomdec amd64 1.19.3-1 [11.5 kB] 70s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif-plugin-libde265 amd64 1.19.3-1 [8968 B] 70s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 libheif1 amd64 1.19.3-1 [415 kB] 70s Get:89 http://ftpmaster.internal/ubuntu plucky/universe amd64 liburiparser1 amd64 0.9.8+dfsg-2 [46.8 kB] 70s Get:90 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmlbase1t64 amd64 1.3.0-12build1 [49.9 kB] 70s Get:91 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmldom1t64 amd64 1.3.0-12build1 [156 kB] 70s Get:92 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkmlengine1t64 amd64 1.3.0-12build1 [71.4 kB] 70s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 mysql-common all 5.8+1.1.1 [6800 B] 70s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 libmysqlclient21 amd64 8.0.40-1 [1250 kB] 70s Get:95 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-4ubuntu3 [56.6 kB] 70s Get:96 http://ftpmaster.internal/ubuntu plucky/universe amd64 libnetcdf19t64 amd64 1:4.9.2-6ubuntu1 [472 kB] 70s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl7 amd64 2.4.7-8 [43.9 kB] 70s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 libodbc2 amd64 2.3.12-1ubuntu1 [158 kB] 70s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 unixodbc-common all 2.3.12-1ubuntu1 [8796 B] 70s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libodbcinst2 amd64 2.3.12-1ubuntu1 [30.7 kB] 70s Get:101 http://ftpmaster.internal/ubuntu plucky/universe amd64 libogdi4.1 amd64 4.1.1+ds-5 [219 kB] 70s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libopenjp2-7 amd64 2.5.0-2ubuntu1 [184 kB] 71s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 libgpgmepp6t64 amd64 1.24.0-2ubuntu1 [126 kB] 71s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 liblcms2-2 amd64 2.16-2 [212 kB] 71s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 libpoppler140 amd64 24.08.0-3 [1262 kB] 71s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libpq5 amd64 17.0-1 [249 kB] 71s Get:107 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqhull-r8.0 amd64 2020.2-6build1 [193 kB] 71s Get:108 http://ftpmaster.internal/ubuntu plucky/universe amd64 librttopo1 amd64 1.1.0-3build2 [191 kB] 71s Get:109 http://ftpmaster.internal/ubuntu plucky/universe amd64 libspatialite8t64 amd64 5.1.0-3build1 [1919 kB] 71s Get:110 http://ftpmaster.internal/ubuntu plucky/universe amd64 libxerces-c3.2t64 amd64 3.2.4+debian-1.3 [917 kB] 71s Get:111 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgdal35 amd64 3.9.3+dfsg-1build1 [10.0 MB] 72s Get:112 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-metadata all 12-4 [6582 B] 72s Get:113 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-tablesorter all 1:2.31.3+dfsg1-4 [192 kB] 72s Get:114 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-throttle-debounce all 1.1+dfsg.1-2 [12.5 kB] 72s Get:115 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblbfgsb0 amd64 3.0+dfsg.4-1build1 [29.9 kB] 72s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.0-2 [2107 kB] 72s Get:117 http://ftpmaster.internal/ubuntu plucky/universe amd64 pybuild-plugin-autopkgtest all 6.20241024 [1746 B] 72s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-packaging all 24.2-1 [51.5 kB] 72s Get:119 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyproject-hooks all 1.2.0-1 [10.2 kB] 72s Get:120 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-toml all 0.10.2-1 [16.5 kB] 72s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-wheel all 0.45.1-1 [57.7 kB] 72s Get:122 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-build all 1.2.2-1 [31.0 kB] 72s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-installer all 0.7.0+dfsg1-3 [17.4 kB] 72s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 pybuild-plugin-pyproject all 6.20241024 [1728 B] 72s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-affine all 2.4.0-1 [14.3 kB] 72s Get:126 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-all amd64 3.12.6-0ubuntu1 [886 B] 72s Get:127 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-numpy amd64 1:1.26.4+ds-11ubuntu1 [5319 kB] 72s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-cftime amd64 1.6.4-1build1 [346 kB] 72s Get:129 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-colorama all 0.4.6-4 [32.1 kB] 72s Get:130 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-click all 8.1.7-2 [79.5 kB] 72s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-click-plugins all 1.1.1-4 [9288 B] 72s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-cligj all 0.7.2-2 [7788 B] 72s Get:133 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-cloudpickle all 3.0.0-2 [21.5 kB] 72s Get:134 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.0-2 [719 kB] 72s Get:135 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-coverage amd64 7.4.4+dfsg1-0ubuntu3 [150 kB] 72s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-fsspec all 2024.9.0-1 [207 kB] 72s Get:137 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-toolz all 1.0.0-1 [44.9 kB] 73s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-locket all 1.0.0-2 [5872 B] 73s Get:139 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-partd all 1.4.2-1 [15.7 kB] 73s Get:140 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-dask all 2024.5.2+dfsg-1 [849 kB] 73s Get:141 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dateutil all 2.9.0-3 [80.2 kB] 73s Get:142 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-decorator all 5.1.1-5 [10.1 kB] 73s Get:143 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-iniconfig all 1.1.1-2 [6024 B] 73s Get:144 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-netcdf4 amd64 1.7.2-1build1 [942 kB] 73s Get:145 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-tz all 2024.1-2 [31.4 kB] 73s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pandas-lib amd64 2.2.3+dfsg-5ubuntu1 [8271 kB] 73s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pandas all 2.2.3+dfsg-5ubuntu1 [3112 kB] 73s Get:148 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pluggy all 1.5.0-1 [21.0 kB] 73s Get:149 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyproj amd64 3.7.0-1build1 [633 kB] 73s Get:150 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pytest all 8.3.3-1 [251 kB] 73s Get:151 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-isonscreen all 1.2.0-1.1 [3244 B] 73s Get:152 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pytest-cov all 5.0.0-1 [21.3 kB] 73s Get:153 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pytest-timeout all 2.3.1-1 [22.1 kB] 73s Get:154 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 python3-rasterio amd64 1.4.3-1 [2049 kB] 73s Get:155 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-xarray all 2024.09.0-1 [780 kB] 73s Get:156 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-scipy amd64 1.13.1-5ubuntu1 [21.7 MB] 74s Get:157 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-rioxarray all 0.18.1-1 [1394 kB] 75s Fetched 165 MB in 11s (15.2 MB/s) 75s Selecting previously unselected package libpython3.13-minimal:amd64. 75s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75957 files and directories currently installed.) 75s Preparing to unpack .../000-libpython3.13-minimal_3.13.0-2_amd64.deb ... 75s Unpacking libpython3.13-minimal:amd64 (3.13.0-2) ... 75s Selecting previously unselected package python3.13-minimal. 75s Preparing to unpack .../001-python3.13-minimal_3.13.0-2_amd64.deb ... 75s Unpacking python3.13-minimal (3.13.0-2) ... 75s Selecting previously unselected package libjs-jquery. 75s Preparing to unpack .../002-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 75s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 75s Selecting previously unselected package libjs-jquery-hotkeys. 75s Preparing to unpack .../003-libjs-jquery-hotkeys_0~20130707+git2d51e3a9+dfsg-2.1_all.deb ... 75s Unpacking libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2.1) ... 75s Selecting previously unselected package m4. 75s Preparing to unpack .../004-m4_1.4.19-4build1_amd64.deb ... 75s Unpacking m4 (1.4.19-4build1) ... 75s Selecting previously unselected package autoconf. 75s Preparing to unpack .../005-autoconf_2.72-3_all.deb ... 75s Unpacking autoconf (2.72-3) ... 75s Selecting previously unselected package autotools-dev. 75s Preparing to unpack .../006-autotools-dev_20220109.1_all.deb ... 75s Unpacking autotools-dev (20220109.1) ... 75s Selecting previously unselected package automake. 75s Preparing to unpack .../007-automake_1%3a1.16.5-1.3ubuntu1_all.deb ... 75s Unpacking automake (1:1.16.5-1.3ubuntu1) ... 75s Selecting previously unselected package autopoint. 75s Preparing to unpack .../008-autopoint_0.22.5-2_all.deb ... 75s Unpacking autopoint (0.22.5-2) ... 75s Selecting previously unselected package libisl23:amd64. 75s Preparing to unpack .../009-libisl23_0.27-1_amd64.deb ... 75s Unpacking libisl23:amd64 (0.27-1) ... 75s Selecting previously unselected package libmpc3:amd64. 75s Preparing to unpack .../010-libmpc3_1.3.1-1build2_amd64.deb ... 75s Unpacking libmpc3:amd64 (1.3.1-1build2) ... 75s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 75s Preparing to unpack .../011-cpp-14-x86-64-linux-gnu_14.2.0-9ubuntu1_amd64.deb ... 75s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-9ubuntu1) ... 75s Selecting previously unselected package cpp-14. 75s Preparing to unpack .../012-cpp-14_14.2.0-9ubuntu1_amd64.deb ... 75s Unpacking cpp-14 (14.2.0-9ubuntu1) ... 75s Selecting previously unselected package cpp-x86-64-linux-gnu. 75s Preparing to unpack .../013-cpp-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 75s Unpacking cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 75s Selecting previously unselected package cpp. 75s Preparing to unpack .../014-cpp_4%3a14.1.0-2ubuntu1_amd64.deb ... 75s Unpacking cpp (4:14.1.0-2ubuntu1) ... 75s Selecting previously unselected package libcc1-0:amd64. 75s Preparing to unpack .../015-libcc1-0_14.2.0-9ubuntu1_amd64.deb ... 75s Unpacking libcc1-0:amd64 (14.2.0-9ubuntu1) ... 75s Selecting previously unselected package libgomp1:amd64. 75s Preparing to unpack .../016-libgomp1_14.2.0-9ubuntu1_amd64.deb ... 75s Unpacking libgomp1:amd64 (14.2.0-9ubuntu1) ... 75s Selecting previously unselected package libitm1:amd64. 75s Preparing to unpack .../017-libitm1_14.2.0-9ubuntu1_amd64.deb ... 75s Unpacking libitm1:amd64 (14.2.0-9ubuntu1) ... 75s Selecting previously unselected package libasan8:amd64. 75s Preparing to unpack .../018-libasan8_14.2.0-9ubuntu1_amd64.deb ... 75s Unpacking libasan8:amd64 (14.2.0-9ubuntu1) ... 76s Selecting previously unselected package liblsan0:amd64. 76s Preparing to unpack .../019-liblsan0_14.2.0-9ubuntu1_amd64.deb ... 76s Unpacking liblsan0:amd64 (14.2.0-9ubuntu1) ... 76s Selecting previously unselected package libtsan2:amd64. 76s Preparing to unpack .../020-libtsan2_14.2.0-9ubuntu1_amd64.deb ... 76s Unpacking libtsan2:amd64 (14.2.0-9ubuntu1) ... 76s Selecting previously unselected package libubsan1:amd64. 76s Preparing to unpack .../021-libubsan1_14.2.0-9ubuntu1_amd64.deb ... 76s Unpacking libubsan1:amd64 (14.2.0-9ubuntu1) ... 76s Selecting previously unselected package libhwasan0:amd64. 76s Preparing to unpack .../022-libhwasan0_14.2.0-9ubuntu1_amd64.deb ... 76s Unpacking libhwasan0:amd64 (14.2.0-9ubuntu1) ... 76s Selecting previously unselected package libquadmath0:amd64. 76s Preparing to unpack .../023-libquadmath0_14.2.0-9ubuntu1_amd64.deb ... 76s Unpacking libquadmath0:amd64 (14.2.0-9ubuntu1) ... 76s Selecting previously unselected package libgcc-14-dev:amd64. 76s Preparing to unpack .../024-libgcc-14-dev_14.2.0-9ubuntu1_amd64.deb ... 76s Unpacking libgcc-14-dev:amd64 (14.2.0-9ubuntu1) ... 76s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 76s Preparing to unpack .../025-gcc-14-x86-64-linux-gnu_14.2.0-9ubuntu1_amd64.deb ... 76s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-9ubuntu1) ... 76s Selecting previously unselected package gcc-14. 76s Preparing to unpack .../026-gcc-14_14.2.0-9ubuntu1_amd64.deb ... 76s Unpacking gcc-14 (14.2.0-9ubuntu1) ... 76s Selecting previously unselected package gcc-x86-64-linux-gnu. 76s Preparing to unpack .../027-gcc-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 76s Unpacking gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 76s Selecting previously unselected package gcc. 76s Preparing to unpack .../028-gcc_4%3a14.1.0-2ubuntu1_amd64.deb ... 76s Unpacking gcc (4:14.1.0-2ubuntu1) ... 76s Selecting previously unselected package libstdc++-14-dev:amd64. 76s Preparing to unpack .../029-libstdc++-14-dev_14.2.0-9ubuntu1_amd64.deb ... 76s Unpacking libstdc++-14-dev:amd64 (14.2.0-9ubuntu1) ... 76s Selecting previously unselected package g++-14-x86-64-linux-gnu. 76s Preparing to unpack .../030-g++-14-x86-64-linux-gnu_14.2.0-9ubuntu1_amd64.deb ... 76s Unpacking g++-14-x86-64-linux-gnu (14.2.0-9ubuntu1) ... 77s Selecting previously unselected package g++-14. 77s Preparing to unpack .../031-g++-14_14.2.0-9ubuntu1_amd64.deb ... 77s Unpacking g++-14 (14.2.0-9ubuntu1) ... 77s Selecting previously unselected package g++-x86-64-linux-gnu. 77s Preparing to unpack .../032-g++-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 77s Unpacking g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 77s Selecting previously unselected package g++. 77s Preparing to unpack .../033-g++_4%3a14.1.0-2ubuntu1_amd64.deb ... 77s Unpacking g++ (4:14.1.0-2ubuntu1) ... 77s Selecting previously unselected package build-essential. 77s Preparing to unpack .../034-build-essential_12.10ubuntu1_amd64.deb ... 77s Unpacking build-essential (12.10ubuntu1) ... 77s Selecting previously unselected package libdebhelper-perl. 77s Preparing to unpack .../035-libdebhelper-perl_13.20ubuntu1_all.deb ... 77s Unpacking libdebhelper-perl (13.20ubuntu1) ... 77s Selecting previously unselected package libtool. 77s Preparing to unpack .../036-libtool_2.4.7-8_all.deb ... 77s Unpacking libtool (2.4.7-8) ... 77s Selecting previously unselected package dh-autoreconf. 77s Preparing to unpack .../037-dh-autoreconf_20_all.deb ... 77s Unpacking dh-autoreconf (20) ... 77s Selecting previously unselected package libarchive-zip-perl. 77s Preparing to unpack .../038-libarchive-zip-perl_1.68-1_all.deb ... 77s Unpacking libarchive-zip-perl (1.68-1) ... 77s Selecting previously unselected package libfile-stripnondeterminism-perl. 77s Preparing to unpack .../039-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... 77s Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... 77s Selecting previously unselected package dh-strip-nondeterminism. 77s Preparing to unpack .../040-dh-strip-nondeterminism_1.14.0-1_all.deb ... 77s Unpacking dh-strip-nondeterminism (1.14.0-1) ... 77s Selecting previously unselected package debugedit. 77s Preparing to unpack .../041-debugedit_1%3a5.1-1_amd64.deb ... 77s Unpacking debugedit (1:5.1-1) ... 77s Selecting previously unselected package dwz. 77s Preparing to unpack .../042-dwz_0.15-1build6_amd64.deb ... 77s Unpacking dwz (0.15-1build6) ... 77s Selecting previously unselected package gettext. 77s Preparing to unpack .../043-gettext_0.22.5-2_amd64.deb ... 77s Unpacking gettext (0.22.5-2) ... 77s Selecting previously unselected package intltool-debian. 77s Preparing to unpack .../044-intltool-debian_0.35.0+20060710.6_all.deb ... 77s Unpacking intltool-debian (0.35.0+20060710.6) ... 77s Selecting previously unselected package po-debconf. 77s Preparing to unpack .../045-po-debconf_1.0.21+nmu1_all.deb ... 77s Unpacking po-debconf (1.0.21+nmu1) ... 77s Selecting previously unselected package debhelper. 77s Preparing to unpack .../046-debhelper_13.20ubuntu1_all.deb ... 77s Unpacking debhelper (13.20ubuntu1) ... 77s Selecting previously unselected package dh-python. 77s Preparing to unpack .../047-dh-python_6.20241024_all.deb ... 77s Unpacking dh-python (6.20241024) ... 77s Selecting previously unselected package fonts-dejavu-mono. 77s Preparing to unpack .../048-fonts-dejavu-mono_2.37-8_all.deb ... 77s Unpacking fonts-dejavu-mono (2.37-8) ... 77s Selecting previously unselected package fonts-dejavu-core. 77s Preparing to unpack .../049-fonts-dejavu-core_2.37-8_all.deb ... 77s Unpacking fonts-dejavu-core (2.37-8) ... 77s Selecting previously unselected package fontconfig-config. 77s Preparing to unpack .../050-fontconfig-config_2.15.0-1.1ubuntu2_amd64.deb ... 77s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 77s Selecting previously unselected package gdal-data. 77s Preparing to unpack .../051-gdal-data_3.9.3+dfsg-1build1_all.deb ... 77s Unpacking gdal-data (3.9.3+dfsg-1build1) ... 78s Selecting previously unselected package gdal-plugins:amd64. 78s Preparing to unpack .../052-gdal-plugins_3.9.3+dfsg-1build1_amd64.deb ... 78s Unpacking gdal-plugins:amd64 (3.9.3+dfsg-1build1) ... 78s Selecting previously unselected package libaec0:amd64. 78s Preparing to unpack .../053-libaec0_1.1.3-1_amd64.deb ... 78s Unpacking libaec0:amd64 (1.1.3-1) ... 78s Selecting previously unselected package libaom3:amd64. 78s Preparing to unpack .../054-libaom3_3.11.0-1_amd64.deb ... 78s Unpacking libaom3:amd64 (3.11.0-1) ... 78s Selecting previously unselected package libblas3:amd64. 78s Preparing to unpack .../055-libblas3_3.12.0-4_amd64.deb ... 78s Unpacking libblas3:amd64 (3.12.0-4) ... 78s Selecting previously unselected package libgfortran5:amd64. 78s Preparing to unpack .../056-libgfortran5_14.2.0-9ubuntu1_amd64.deb ... 78s Unpacking libgfortran5:amd64 (14.2.0-9ubuntu1) ... 78s Selecting previously unselected package liblapack3:amd64. 78s Preparing to unpack .../057-liblapack3_3.12.0-4_amd64.deb ... 78s Unpacking liblapack3:amd64 (3.12.0-4) ... 78s Selecting previously unselected package libarpack2t64:amd64. 78s Preparing to unpack .../058-libarpack2t64_3.9.1-1.1ubuntu1_amd64.deb ... 78s Unpacking libarpack2t64:amd64 (3.9.1-1.1ubuntu1) ... 78s Selecting previously unselected package libarmadillo14. 78s Preparing to unpack .../059-libarmadillo14_1%3a14.2.1+dfsg-1_amd64.deb ... 78s Unpacking libarmadillo14 (1:14.2.1+dfsg-1) ... 78s Selecting previously unselected package libsnappy1v5:amd64. 78s Preparing to unpack .../060-libsnappy1v5_1.2.1-1_amd64.deb ... 78s Unpacking libsnappy1v5:amd64 (1.2.1-1) ... 78s Selecting previously unselected package libblosc1:amd64. 78s Preparing to unpack .../061-libblosc1_1.21.5+ds-1build1_amd64.deb ... 78s Unpacking libblosc1:amd64 (1.21.5+ds-1build1) ... 78s Selecting previously unselected package libcfitsio10t64:amd64. 78s Preparing to unpack .../062-libcfitsio10t64_4.5.0-5_amd64.deb ... 78s Unpacking libcfitsio10t64:amd64 (4.5.0-5) ... 78s Selecting previously unselected package libde265-0:amd64. 78s Preparing to unpack .../063-libde265-0_1.0.15-1build4_amd64.deb ... 78s Unpacking libde265-0:amd64 (1.0.15-1build4) ... 78s Selecting previously unselected package libdeflate0:amd64. 78s Preparing to unpack .../064-libdeflate0_1.22-1_amd64.deb ... 78s Unpacking libdeflate0:amd64 (1.22-1) ... 78s Selecting previously unselected package libfontconfig1:amd64. 78s Preparing to unpack .../065-libfontconfig1_2.15.0-1.1ubuntu2_amd64.deb ... 78s Unpacking libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ... 78s Selecting previously unselected package libfyba0t64:amd64. 78s Preparing to unpack .../066-libfyba0t64_4.1.1-11build1_amd64.deb ... 78s Unpacking libfyba0t64:amd64 (4.1.1-11build1) ... 78s Selecting previously unselected package libminizip1t64:amd64. 78s Preparing to unpack .../067-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ... 78s Unpacking libminizip1t64:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 78s Selecting previously unselected package libfreexl1:amd64. 78s Preparing to unpack .../068-libfreexl1_2.0.0-1build2_amd64.deb ... 78s Unpacking libfreexl1:amd64 (2.0.0-1build2) ... 78s Selecting previously unselected package libgeos3.13.0:amd64. 78s Preparing to unpack .../069-libgeos3.13.0_3.13.0-1_amd64.deb ... 78s Unpacking libgeos3.13.0:amd64 (3.13.0-1) ... 78s Selecting previously unselected package libgeos-c1t64:amd64. 78s Preparing to unpack .../070-libgeos-c1t64_3.13.0-1_amd64.deb ... 78s Unpacking libgeos-c1t64:amd64 (3.13.0-1) ... 78s Selecting previously unselected package proj-data. 78s Preparing to unpack .../071-proj-data_9.5.0-1_all.deb ... 78s Unpacking proj-data (9.5.0-1) ... 78s Selecting previously unselected package libjbig0:amd64. 78s Preparing to unpack .../072-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 78s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 78s Selecting previously unselected package libjpeg-turbo8:amd64. 78s Preparing to unpack .../073-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ... 78s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 78s Selecting previously unselected package libjpeg8:amd64. 78s Preparing to unpack .../074-libjpeg8_8c-2ubuntu11_amd64.deb ... 78s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 78s Selecting previously unselected package liblerc4:amd64. 78s Preparing to unpack .../075-liblerc4_4.0.0+ds-5ubuntu1_amd64.deb ... 78s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 78s Selecting previously unselected package libsharpyuv0:amd64. 78s Preparing to unpack .../076-libsharpyuv0_1.4.0-0.1_amd64.deb ... 78s Unpacking libsharpyuv0:amd64 (1.4.0-0.1) ... 78s Selecting previously unselected package libwebp7:amd64. 78s Preparing to unpack .../077-libwebp7_1.4.0-0.1_amd64.deb ... 78s Unpacking libwebp7:amd64 (1.4.0-0.1) ... 78s Selecting previously unselected package libtiff6:amd64. 78s Preparing to unpack .../078-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ... 78s Unpacking 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previously unselected package python3-wheel. 80s Preparing to unpack .../120-python3-wheel_0.45.1-1_all.deb ... 80s Unpacking python3-wheel (0.45.1-1) ... 80s Selecting previously unselected package python3-build. 80s Preparing to unpack .../121-python3-build_1.2.2-1_all.deb ... 80s Unpacking python3-build (1.2.2-1) ... 80s Selecting previously unselected package python3-installer. 80s Preparing to unpack .../122-python3-installer_0.7.0+dfsg1-3_all.deb ... 80s Unpacking python3-installer (0.7.0+dfsg1-3) ... 80s Selecting previously unselected package pybuild-plugin-pyproject. 80s Preparing to unpack .../123-pybuild-plugin-pyproject_6.20241024_all.deb ... 80s Unpacking pybuild-plugin-pyproject (6.20241024) ... 80s Selecting previously unselected package python3-affine. 80s Preparing to unpack .../124-python3-affine_2.4.0-1_all.deb ... 80s Unpacking python3-affine (2.4.0-1) ... 80s Selecting previously unselected package python3-all. 80s Preparing to unpack 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82s Setting up libaom3:amd64 (3.11.0-1) ... 82s Setting up mysql-common (5.8+1.1.1) ... 82s update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode 82s Setting up libmysqlclient21:amd64 (8.0.40-1) ... 82s Setting up liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 82s Setting up proj-data (9.5.0-1) ... 82s Setting up libogdi4.1:amd64 (4.1.1+ds-5) ... 82s Setting up python3-colorama (0.4.6-4) ... 82s Setting up libarchive-zip-perl (1.68-1) ... 82s Setting up libgeos3.13.0:amd64 (3.13.0-1) ... 82s Setting up libdebhelper-perl (13.20ubuntu1) ... 82s Setting up python3-fsspec (2024.9.0-1) ... 83s Setting up libpq5:amd64 (17.0-1) ... 83s Setting up libdeflate0:amd64 (1.22-1) ... 83s Setting up m4 (1.4.19-4build1) ... 83s Setting up libqhull-r8.0:amd64 (2020.2-6build1) ... 83s Setting up python3-all (3.12.6-0ubuntu1) ... 83s Setting up libjs-jquery-throttle-debounce (1.1+dfsg.1-2) ... 83s Setting up libxerces-c3.2t64:amd64 (3.2.4+debian-1.3) ... 83s 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pybuild-plugin-autopkgtest (6.20241024) ... 98s Setting up libheif-plugin-aomdec:amd64 (1.19.3-1) ... 98s Setting up libheif1:amd64 (1.19.3-1) ... 98s Setting up libheif-plugin-libde265:amd64 (1.19.3-1) ... 98s Processing triggers for libc-bin (2.40-1ubuntu3) ... 98s Processing triggers for systemd (256.5-2ubuntu4) ... 98s Processing triggers for man-db (2.13.0-1) ... 100s Processing triggers for sgml-base (1.31) ... 100s Setting up libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ... 100s Processing triggers for install-info (7.1.1-1) ... 100s Setting up libpoppler140:amd64 (24.08.0-3) ... 100s Setting up libgdal35:amd64 (3.9.3+dfsg-1build1) ... 100s Setting up python3-rasterio (1.4.3-1) ... 100s Setting up python3-rioxarray (0.18.1-1) ... 100s Processing triggers for libc-bin (2.40-1ubuntu3) ... 101s autopkgtest [12:19:11]: test pybuild-autopkgtest: pybuild-autopkgtest 101s autopkgtest [12:19:11]: test pybuild-autopkgtest: [----------------------- 101s pybuild-autopkgtest 102s I: pybuild base:311: cd /tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build; python3.12 -m pytest -k "not test_clip_geojson__no_drop and not test_clip_geojson and not test_interpolate_na and not test_merge_datasets and not test_open_rasterio_mask_chunk_clip and not test_to_raster__different_dtype and not test_nonstandard_dims_write_coordinate_system__projected_ft" 104s ============================= test session starts ============================== 104s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 104s rootdir: /tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build 104s configfile: pyproject.toml 104s plugins: typeguard-4.4.1, cov-5.0.0, timeout-2.3.1 104s collected 491 items / 44 deselected / 447 selected 104s 105s test/integration/test_integration__io.py ............................... [ 6%] 109s .............XF...x............................................ [ 21%] 109s test/integration/test_integration__io_uri_manager.py ........ [ 22%] 110s test/integration/test_integration_merge.py ..xx. [ 23%] 110s test/integration/test_integration_rioxarray.py ......................... [ 29%] 112s ........................................................................ [ 45%] 113s ........................................................................ [ 61%] 114s ..............................................XX........................ [ 77%] 115s ........................................................................ [ 93%] 115s ............ [ 96%] 116s test/integration/test_integration_xarray_plugin.py ...... [ 97%] 116s test/unit/test_options.py .... [ 98%] 116s test/unit/test_show_versions.py .... [ 99%] 116s test/unit/test_unit_reproject_match.py . [100%] 116s 116s =================================== FAILURES =================================== 116s __________________________ test_rasterio_environment ___________________________ 116s 116s def test_rasterio_environment(): 116s with create_tmp_geotiff() as (tmp_file, expected): 116s # Should fail with error since suffix not allowed 116s > with pytest.raises(Exception): 116s E Failed: DID NOT RAISE 116s 116s test/integration/test_integration__io.py:869: Failed 116s =============================== warnings summary =============================== 116s test/integration/test_integration__io.py: 20 warnings 116s test/integration/test_integration_rioxarray.py: 178 warnings 116s /usr/lib/python3/dist-packages/rioxarray/_io.py:521: DeprecationWarning: string or file could not be read to its end due to unmatched data; this will raise a ValueError in the future. 116s new_val = numpy.fromstring(value.strip("{}"), dtype="float", sep=",") 116s 116s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio] 116s /usr/lib/python3/dist-packages/xarray/core/variable.py:2628: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SolarZenith_1', mode='r', kwargs={'sharing': False}, manager_id='d085275a-5d19-4bb3-8615-fb16068e7c8a'), but file is not already closed. This may indicate a bug. 116s def __init__(self, dims, data, attrs=None, encoding=None, fastpath=False): 116s 116s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio] 116s /usr/lib/python3/dist-packages/xarray/core/variable.py:2628: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SolarAzimuth_1', mode='r', kwargs={'sharing': False}, manager_id='08166928-a2e6-41ef-8f65-a368eaeed907'), but file is not already closed. This may indicate a bug. 116s def __init__(self, dims, data, attrs=None, encoding=None, fastpath=False): 116s 116s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio] 116s /usr/lib/python3/dist-packages/xarray/core/variable.py:2628: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:gflags_1', mode='r', kwargs={'sharing': False}, manager_id='a60d053c-61ae-4eee-9b7e-f13a35559859'), but file is not already closed. This may indicate a bug. 116s def __init__(self, dims, data, attrs=None, encoding=None, fastpath=False): 116s 116s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio] 116s /usr/lib/python3/dist-packages/xarray/core/variable.py:2628: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:orbit_pnt_1', mode='r', kwargs={'sharing': False}, manager_id='2d9ee2ef-5cfa-4b10-a45f-83c2c9f2d2b7'), but file is not already closed. This may indicate a bug. 116s def __init__(self, dims, data, attrs=None, encoding=None, fastpath=False): 116s 116s test/integration/test_integration__io.py::test_serialization 116s :488: RuntimeWarning: numpy.ndarray size changed, may indicate binary incompatibility. Expected 16 from C header, got 96 from PyObject 116s 116s test/integration/test_integration__io.py: 13 warnings 116s test/integration/test_integration_rioxarray.py: 40 warnings 116s /usr/lib/python3/dist-packages/rioxarray/_io.py:939: DeprecationWarning: Supplying chunks as dimension-order tuples is deprecated. It will raise an error in the future. Instead use a dict with dimension names as keys. 116s return result.chunk(chunks, name_prefix=name_prefix, token=token) 116s 116s test/integration/test_integration__io.py: 24 warnings 116s /tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/integration/test_integration__io.py:502: DeprecationWarning: dropping variables using `drop` is deprecated; use drop_vars. 116s raster_ds[band_name], expected.sel(band=band).drop("band") 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-True] 116s /usr/lib/python3/dist-packages/dask/order.py:255: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:granule_pnt_1', mode='r', kwargs={'sharing': False}, manager_id='af4d7daf-e838-4fba-88e9-150c53da2e1f'), but file is not already closed. This may indicate a bug. 116s for dep in dependents.get(item, ()): 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-True] 116s /usr/lib/python3/dist-packages/dask/order.py:255: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:num_observations_1km', mode='r', kwargs={'sharing': False}, manager_id='a3064b86-e8c2-4ed5-aae0-d2c390ee4fc0'), but file is not already closed. This may indicate a bug. 116s for dep in dependents.get(item, ()): 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-True] 116s /usr/lib/python3/dist-packages/dask/order.py:255: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:Range_1', mode='r', kwargs={'sharing': False}, manager_id='57f4244f-065b-41e7-a789-d0424d587bba'), but file is not already closed. This may indicate a bug. 116s for dep in dependents.get(item, ()): 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-True] 116s /usr/lib/python3/dist-packages/dask/order.py:255: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:state_1km_1', mode='r', kwargs={'sharing': False}, manager_id='885034a7-814e-4f0c-ae8a-d06a256aa11f'), but file is not already closed. This may indicate a bug. 116s for dep in dependents.get(item, ()): 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-True] 116s /usr/lib/python3/dist-packages/dask/order.py:255: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SensorZenith_1', mode='r', kwargs={'sharing': False}, manager_id='dfe641a2-920c-4d97-8746-c7808f5c94cf'), but file is not already closed. This may indicate a bug. 116s for dep in dependents.get(item, ()): 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-True] 116s /usr/lib/python3/dist-packages/dask/order.py:255: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SensorAzimuth_1', mode='r', kwargs={'sharing': False}, manager_id='344aa244-329f-49b1-916e-d9a1ff5b7111'), but file is not already closed. This may indicate a bug. 116s for dep in dependents.get(item, ()): 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-None] 116s /usr/lib/python3.12/contextlib.py:446: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras0/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='80515fa9-ddf1-4590-a434-b81406040f1e'), but file is not already closed. This may indicate a bug. 116s def __exit__(self, exctype, excinst, exctb): 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-None] 116s /usr/lib/python3.12/contextlib.py:446: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras0/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='75365586-9d83-462e-beba-1584c4afaccf'), but file is not already closed. This may indicate a bug. 116s def __exit__(self, exctype, excinst, exctb): 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-None] 116s /usr/lib/python3/dist-packages/xarray/core/common.py:328: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp7o36mu0v/temp-4.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='6ce15de9-8176-451c-8945-34996af0cd52'), but file is not already closed. This may indicate a bug. 116s object.__setattr__(self, name, value) 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-None] 116s /usr/lib/python3/dist-packages/xarray/core/common.py:328: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp7o36mu0v/temp-4.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='040027ef-67e6-4178-b61c-bae10ea7fc2b'), but file is not already closed. This may indicate a bug. 116s object.__setattr__(self, name, value) 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 116s /usr/lib/python3/dist-packages/xarray/core/variable.py:2628: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras1/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='0d2061e3-e87a-47fc-afa3-091be2372fbf'), but file is not already closed. This may indicate a bug. 116s def __init__(self, dims, data, attrs=None, encoding=None, fastpath=False): 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 116s /usr/lib/python3/dist-packages/xarray/core/variable.py:2628: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras1/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='e6fc2509-d067-4b3f-b9eb-3bf3e107ee32'), but file is not already closed. This may indicate a bug. 116s def __init__(self, dims, data, attrs=None, encoding=None, fastpath=False): 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 116s /usr/lib/python3/dist-packages/xarray/core/dataset.py:282: UserWarning: The specified chunks separate the stored chunks along dimension "y" starting at index 1. This could degrade performance. Instead, consider rechunking after loading. 116s warnings.warn( 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 116s /usr/lib/python3/dist-packages/xarray/core/dataset.py:282: UserWarning: The specified chunks separate the stored chunks along dimension "x" starting at index 1. This could degrade performance. Instead, consider rechunking after loading. 116s warnings.warn( 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 116s /usr/lib/python3.12/threading.py:287: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp7o36mu0v/temp-4.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='7647e246-7544-4915-83ec-bac9e02aceaa'), but file is not already closed. This may indicate a bug. 116s if hasattr(lock, '_release_save'): 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 116s /usr/lib/python3.12/threading.py:287: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras1/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='30f46e81-bbed-4fe8-b4b9-b1490463e12a'), but file is not already closed. This may indicate a bug. 116s if hasattr(lock, '_release_save'): 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 116s /usr/lib/python3/dist-packages/_pytest/python.py:159: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras2/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='65ef1d0c-a691-41b1-94d9-8e36eb0a3ac0'), but file is not already closed. This may indicate a bug. 116s result = testfunction(**testargs) 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 116s /usr/lib/python3/dist-packages/_pytest/python.py:159: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras2/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='66f5fe8f-ceeb-4f07-bfc7-c9158ed4a6ee'), but file is not already closed. This may indicate a bug. 116s result = testfunction(**testargs) 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-None] 116s /usr/lib/python3.12/contextlib.py:446: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras2/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='f84efccc-003c-4721-914d-ea8ab28080a1'), but file is not already closed. This may indicate a bug. 116s def __exit__(self, exctype, excinst, exctb): 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-None] 116s /usr/lib/python3/dist-packages/xarray/core/common.py:328: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras3/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='647d002b-9dc3-40ac-9f11-362496b87158'), but file is not already closed. This may indicate a bug. 116s object.__setattr__(self, name, value) 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-None] 116s /usr/lib/python3/dist-packages/xarray/core/common.py:328: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras3/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='bf542a3b-4eb1-49d0-8805-8b7b258b5acf'), but file is not already closed. This may indicate a bug. 116s object.__setattr__(self, name, value) 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-None] 116s /usr/lib/python3/dist-packages/xarray/core/common.py:328: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras3/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='072f79fd-f974-4b52-9e43-3cd46318f941'), but file is not already closed. This may indicate a bug. 116s object.__setattr__(self, name, value) 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-None] 116s /usr/lib/python3/dist-packages/xarray/core/common.py:328: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp5lnxa44n/temp-6.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='4c178bad-7e0d-4c82-95f7-b24b6965be4f'), but file is not already closed. This may indicate a bug. 116s object.__setattr__(self, name, value) 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-None] 116s /usr/lib/python3/dist-packages/xarray/core/common.py:328: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp5lnxa44n/temp-6.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='15b9e2f8-dcbf-48da-880b-158a821a7f21'), but file is not already closed. This may indicate a bug. 116s object.__setattr__(self, name, value) 116s 116s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-None] 116s /usr/lib/python3/dist-packages/xarray/core/common.py:328: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp5lnxa44n/temp-6.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='743bd0f8-0b2a-4ead-8ef2-d2be9636c241'), but file is not already closed. This may indicate a bug. 116s object.__setattr__(self, name, value) 116s 116s test/integration/test_integration__io.py: 8 warnings 116s test/integration/test_integration_rioxarray.py: 2 warnings 116s /usr/lib/python3/dist-packages/rasterio/__init__.py:366: NotGeoreferencedWarning: Dataset has no geotransform, gcps, or rpcs. The identity matrix will be returned. 116s dataset = writer( 116s 116s test/integration/test_integration__io.py::test_notransform 116s test/integration/test_integration__io.py::test_mask_and_scale__unicode[open_rasterio] 116s test/integration/test_integration__io.py::test_mask_and_scale__unicode[open_rasterio1] 116s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio] 116s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio1] 116s /usr/lib/python3/dist-packages/rioxarray/_io.py:1143: NotGeoreferencedWarning: Dataset has no geotransform, gcps, or rpcs. The identity matrix will be returned. 116s warnings.warn(str(rio_warning.message), type(rio_warning.message)) # type: ignore 116s 116s test/integration/test_integration__io.py::test_rasterio_vrt[False] 116s /usr/lib/python3/dist-packages/xarray/core/variable.py:3005: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpq7jfnah5/temp-17.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='9b79ec5a-ed1e-4e41-8d49-8d850c9143c8'), but file is not already closed. This may indicate a bug. 116s for dim, size in zip(var.dims, var.shape, strict=True): 116s 116s test/integration/test_integration__io.py::test_rasterio_vrt[False] 116s /usr/lib/python3/dist-packages/xarray/core/variable.py:3005: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpq7jfnah5/temp-17.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='784e4c5a-cbcf-41b5-aabc-f3d9d815c793'), but file is not already closed. This may indicate a bug. 116s for dim, size in zip(var.dims, var.shape, strict=True): 116s 116s test/integration/test_integration__io.py::test_rasterio_vrt[False] 116s /usr/lib/python3/dist-packages/xarray/core/variable.py:3005: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpq7jfnah5/temp-17.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='61b752a1-892a-4d74-9f76-8ea4165bcc9c'), but file is not already closed. This may indicate a bug. 116s for dim, size in zip(var.dims, var.shape, strict=True): 116s 116s test/integration/test_integration__io.py::test_mask_and_scale[open_rasterio] 116s /tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/integration/test_integration__io.py:1099: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 116s with open_rasterio(test_file, mask_and_scale=True) as rds: 116s 116s test/integration/test_integration__io.py::test_mask_and_scale[open_rasterio1] 116s test/integration/test_integration__io.py::test_mask_and_scale__to_raster[open_rasterio1] 116s /usr/lib/python3/dist-packages/rioxarray/xarray_plugin.py:59: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 116s rds = _io.open_rasterio( 116s 116s test/integration/test_integration__io.py::test_mask_and_scale__to_raster[open_rasterio] 116s /tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/integration/test_integration__io.py:1171: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 116s with open_rasterio(test_file, mask_and_scale=True) as rds: 116s 116s test/integration/test_integration__io.py::test_mask_and_scale__unicode[open_rasterio] 116s /tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/integration/test_integration__io.py:1184: SerializationWarning: variable 'LST' has _Unsigned attribute but is not of integer type. Ignoring attribute. 116s with open_rasterio(test_file, mask_and_scale=True) as rds: 116s 116s test/integration/test_integration__io.py::test_mask_and_scale__unicode[open_rasterio1] 116s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio1] 116s /usr/lib/python3/dist-packages/rioxarray/xarray_plugin.py:59: SerializationWarning: variable 'LST' has _Unsigned attribute but is not of integer type. Ignoring attribute. 116s rds = _io.open_rasterio( 116s 116s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio] 116s /tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/integration/test_integration__io.py:1204: SerializationWarning: variable 'LST' has _Unsigned attribute but is not of integer type. Ignoring attribute. 116s with open_rasterio(test_file, mask_and_scale=True) as rds: 116s 116s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio] 116s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio1] 116s test/integration/test_integration__io.py::test_writing_gcps 116s /usr/lib/python3/dist-packages/rasterio/__init__.py:366: NotGeoreferencedWarning: The given matrix is equal to Affine.identity or its flipped counterpart. GDAL may ignore this matrix and save no geotransform without raising an error. This behavior is somewhat driver-specific. 116s dataset = writer( 116s 116s test/integration/test_integration__io.py::test_notgeoreferenced_warning[open_rasterio1] 116s :868: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpwttlkapw/temp-21.tif', mode='r', kwargs={'sharing': False}, manager_id='f6c0e452-629c-48b4-bcbc-381bc3e79297'), but file is not already closed. This may indicate a bug. 116s 116s test/integration/test_integration__io.py::test_cint16_dtype[None] 116s test/integration/test_integration__io.py::test_cint16_dtype[complex_int16] 116s test/integration/test_integration__io.py::test_cint16_dtype_nodata 116s test/integration/test_integration__io.py::test_cint16_dtype_masked[None] 116s test/integration/test_integration__io.py::test_cint16_dtype_masked[complex_int16] 116s test/integration/test_integration__io.py::test_cint16_promote_dtype 116s test/integration/test_integration__io.py::test_cint16_promote_dtype 116s /usr/lib/python3/dist-packages/rasterio/__init__.py:256: ComplexWarning: Casting complex values to real discards the imaginary part 116s nodata = float(nodata) 116s 116s test/integration/test_integration__io.py::test_read_file_handle_with_dask 116s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1518: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpbf0iqnr_/temp-22.tif', mode='r', kwargs={'sharing': False}, manager_id='50629d29-374b-4edd-ae94-55731b96c4c6'), but file is not already closed. This may indicate a bug. 116s id_coord_names[v].append(k) 116s 116s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 116s /tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpch9jcj4u/temp-3.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='a6404cc9-e340-4235-8fec-629271b5a187'), but file is not already closed. This may indicate a bug. 116s gc.collect() 116s 116s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 116s /tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpch9jcj4u/temp-3.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='8475c737-33c9-4dc4-a908-94eb29632bf6'), but file is not already closed. This may indicate a bug. 116s gc.collect() 116s 116s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 116s /tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpch9jcj4u/temp-3.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='2cb076c3-8e68-4505-9e06-ee911e12c29a'), but file is not already closed. This may indicate a bug. 116s gc.collect() 116s 116s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 116s /tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras0/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='b45e13df-f499-405a-accc-67c59493341b'), but file is not already closed. This may indicate a bug. 116s gc.collect() 116s 116s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 116s /tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpe4q84r5s/temp-5.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='d9f75c60-89c9-4c7e-b93d-84e7e64f84c4'), but file is not already closed. This may indicate a bug. 116s gc.collect() 116s 116s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 116s /tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpe4q84r5s/temp-5.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='4fc99b98-4817-4026-92fb-066c0b1a2307'), but file is not already closed. This may indicate a bug. 116s gc.collect() 116s 116s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 116s /tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpe4q84r5s/temp-5.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='c7c01f45-f770-4a9a-a7a7-4698ca0c52b2'), but file is not already closed. This may indicate a bug. 116s gc.collect() 116s 116s test/integration/test_integration_rioxarray.py::test_reproject_match__rotated 116s test/integration/test_integration_rioxarray.py::test_reproject_match__rotated 116s /usr/lib/python3/dist-packages/rioxarray/rioxarray.py:696: UserWarning: Transform that is non-rectilinear or with rotation found. Unable to recalculate. 116s warnings.warn( 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-False-False-open_method1] 116s /usr/lib/python3.12/contextlib.py:446: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='6d4c4987-3342-4ce5-a24d-7f36ec095e70'), but file is not already closed. This may indicate a bug. 116s def __exit__(self, exctype, excinst, exctb): 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock1-False-True-True-open_method0] 116s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='43774db6-e7fd-456a-9e07-95a92ccc5112'), but file is not already closed. This may indicate a bug. 116s if any(not isinstance(idx, index_type) for idx in indexes.values()): 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock1-False-False-False-open_method2] 116s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1686: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='b535737a-5e67-4c78-b60a-00e57e1c89ad'), but file is not already closed. This may indicate a bug. 116s return iter(self._indexes) 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock1-False-False-False-open_method2] 116s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1686: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='e2effadc-fb96-4a14-8ff5-87e9675b3370'), but file is not already closed. This may indicate a bug. 116s return iter(self._indexes) 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-True-True-open_method2] 116s /usr/lib/python3/dist-packages/numpy/core/__init__.py:129: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='f9f813eb-52c7-4cc0-8097-214e4fada830'), but file is not already closed. This may indicate a bug. 116s def _ufunc_reduce(func): 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-False-False-open_method1] 116s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='577d17c6-53f9-4a6c-b6e8-ebd2dbebf866'), but file is not already closed. This may indicate a bug. 116s if any(not isinstance(idx, index_type) for idx in indexes.values()): 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-False-False-open_method3] 116s /usr/lib/python3/dist-packages/dask/utils.py:748: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='c314d1d7-89c1-4a26-9f5b-8a4e3aa48324'), but file is not already closed. This may indicate a bug. 116s toplevel, _, _ = cls2.__module__.partition(".") 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-False-False-open_method3] 116s /usr/lib/python3/dist-packages/dask/utils.py:748: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='dfb242ce-2f69-4810-ad10-98f603e0a74d'), but file is not already closed. This may indicate a bug. 116s toplevel, _, _ = cls2.__module__.partition(".") 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-False-False-open_method3] 116s /usr/lib/python3/dist-packages/dask/utils.py:748: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='8329613d-a068-412a-bbf7-936f250b218a'), but file is not already closed. This may indicate a bug. 116s toplevel, _, _ = cls2.__module__.partition(".") 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-False-False-open_method3] 116s /usr/lib/python3/dist-packages/dask/utils.py:748: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='049edddd-1326-4bb5-9a48-f5e348e14e9c'), but file is not already closed. This may indicate a bug. 116s toplevel, _, _ = cls2.__module__.partition(".") 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-False-False-open_method3] 116s /usr/lib/python3/dist-packages/dask/utils.py:748: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='7dad9d20-1c0d-4761-ba17-9750bb2cb5ff'), but file is not already closed. This may indicate a bug. 116s toplevel, _, _ = cls2.__module__.partition(".") 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-False-False-open_method3] 116s /usr/lib/python3/dist-packages/dask/utils.py:748: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='a425920d-7223-4b9e-85b3-ddc70f413b25'), but file is not already closed. This may indicate a bug. 116s toplevel, _, _ = cls2.__module__.partition(".") 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-False-False-open_method3] 116s /usr/lib/python3/dist-packages/dask/utils.py:748: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='2635d3e2-1dab-4668-9496-fe8e3c63b54a'), but file is not already closed. This may indicate a bug. 116s toplevel, _, _ = cls2.__module__.partition(".") 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-False-False-open_method3] 116s /usr/lib/python3/dist-packages/dask/utils.py:748: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='f9b764d2-390f-406c-8754-7d6718574f03'), but file is not already closed. This may indicate a bug. 116s toplevel, _, _ = cls2.__module__.partition(".") 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-False-False-open_method3] 116s /usr/lib/python3/dist-packages/dask/utils.py:748: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='5a97627c-08a9-4872-847c-0559604eb7ab'), but file is not already closed. This may indicate a bug. 116s toplevel, _, _ = cls2.__module__.partition(".") 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-False-False-open_method3] 116s /usr/lib/python3/dist-packages/dask/utils.py:748: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='0e14e991-042a-449b-8bad-24a6b06ee167'), but file is not already closed. This may indicate a bug. 116s toplevel, _, _ = cls2.__module__.partition(".") 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-False-False-open_method3] 116s /usr/lib/python3/dist-packages/dask/utils.py:748: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='04859024-d374-451b-8a3c-12e8b529fd83'), but file is not already closed. This may indicate a bug. 116s toplevel, _, _ = cls2.__module__.partition(".") 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster_3d[None-False-True-open_method0] 116s /usr/lib/python3.12/copy.py:245: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='b19ba8b2-9450-41aa-a9a6-97e7278993c8'), but file is not already closed. This may indicate a bug. 116s memo[id(memo)]=[x] 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock1-False-True-open_method3] 116s /usr/lib/python3.12/copy.py:143: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='788e6f30-4390-4f97-8be9-7c59eb003763'), but file is not already closed. This may indicate a bug. 116s y = copier(memo) 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock1-False-True-open_method3] 116s /usr/lib/python3.12/copy.py:143: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='48425f05-1b10-4700-86fe-03635353310f'), but file is not already closed. This may indicate a bug. 116s y = copier(memo) 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock1-False-True-open_method3] 116s /usr/lib/python3.12/copy.py:143: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='17e03af7-dc4f-43fe-ae9f-be49bd0cbb2a'), but file is not already closed. This may indicate a bug. 116s y = copier(memo) 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock1-False-True-open_method3] 116s /usr/lib/python3.12/copy.py:143: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='937be087-1fce-427d-87ce-989d8bcc3514'), but file is not already closed. This may indicate a bug. 116s y = copier(memo) 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock1-False-True-open_method3] 116s /usr/lib/python3.12/copy.py:143: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='a6636fb6-9fb3-4ab3-9272-50ce7595ff6d'), but file is not already closed. This may indicate a bug. 116s y = copier(memo) 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-False-open_method3] 116s /usr/lib/python3/dist-packages/dask/blockwise.py:1185: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='067fcba0-155e-40a0-9e90-16af14be8a59'), but file is not already closed. This may indicate a bug. 116s return dep + "_" + "_".join(str(i) for i in list(ind)) 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-False-open_method3] 116s /usr/lib/python3/dist-packages/dask/blockwise.py:1185: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='b885d6aa-8778-419a-8350-f757a8e87817'), but file is not already closed. This may indicate a bug. 116s return dep + "_" + "_".join(str(i) for i in list(ind)) 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-False-open_method3] 116s /usr/lib/python3/dist-packages/dask/blockwise.py:1185: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='53084b56-f719-45c0-931f-56db647eb759'), but file is not already closed. This may indicate a bug. 116s return dep + "_" + "_".join(str(i) for i in list(ind)) 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-False-open_method3] 116s /usr/lib/python3/dist-packages/dask/blockwise.py:1185: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='46ef485b-9de5-4094-a0b1-ed110842c589'), but file is not already closed. This may indicate a bug. 116s return dep + "_" + "_".join(str(i) for i in list(ind)) 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-False-open_method3] 116s /usr/lib/python3/dist-packages/dask/blockwise.py:1185: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='f8ec6483-7bb3-47ba-ab1c-cb8ff042164a'), but file is not already closed. This may indicate a bug. 116s return dep + "_" + "_".join(str(i) for i in list(ind)) 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[True] 116s /tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/integration/test_integration_rioxarray.py:1803: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 116s with rioxarray.open_rasterio( 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[True] 116s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[False] 116s /usr/lib/python3/dist-packages/rioxarray/_io.py:672: UserWarning: Offsets differ across bands. The 'scale_factor' attribute will not be added. See the 'scales' attribute. 116s warnings.warn( 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[True] 116s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[False] 116s /usr/lib/python3/dist-packages/rioxarray/_io.py:681: UserWarning: Offsets differ across bands. The 'add_offset' attribute will not be added. See the 'offsets' attribute. 116s warnings.warn( 116s 116s test/integration/test_integration_rioxarray.py::test_to_raster__dataset__mask_and_scale[True-True] 116s test/integration/test_integration_rioxarray.py::test_to_raster__dataset__mask_and_scale[None-True] 116s /tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/integration/test_integration_rioxarray.py:1897: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 116s with rioxarray.open_rasterio( 116s 116s test/integration/test_integration_rioxarray.py::test_write_nodata__missing 116s /usr/lib/python3/dist-packages/pandas/core/indexes/base.py:1766: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/test_find_crs.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='2bfef1fb-d17e-4c50-a2ac-cc4bd7cd7bee'), but file is not already closed. This may indicate a bug. 116s return FrozenList((self.name,)) 116s 116s test/integration/test_integration_xarray_plugin.py::test_xarray_open_dataset[kwargs2] 116s /usr/lib/python3/dist-packages/xarray/core/variable.py:3005: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/cog.tif', mode='r', kwargs={'sharing': False}, manager_id='d2732944-f662-4512-bff5-d5a1c5cb71cd'), but file is not already closed. This may indicate a bug. 116s for dim, size in zip(var.dims, var.shape, strict=True): 116s 116s test/integration/test_integration_xarray_plugin.py::test_xarray_open_dataset[kwargs2] 116s /usr/lib/python3/dist-packages/xarray/core/variable.py:3005: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/cog.tif', mode='r', kwargs={'sharing': False}, manager_id='34ed291f-988c-45a8-8df0-dd87c8a24a68'), but file is not already closed. This may indicate a bug. 116s for dim, size in zip(var.dims, var.shape, strict=True): 116s 116s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 116s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:QC_500m_1', mode='r', kwargs={'sharing': False}, manager_id='026b6a71-8bf0-4c00-b59a-9f50643783f0'), but file is not already closed. This may indicate a bug. 116s if any(not isinstance(idx, index_type) for idx in indexes.values()): 116s 116s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 116s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:obscov_500m_1', mode='r', kwargs={'sharing': False}, manager_id='a622917b-da12-4214-8a74-23dc890a959f'), but file is not already closed. This may indicate a bug. 116s if any(not isinstance(idx, index_type) for idx in indexes.values()): 116s 116s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 116s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1486: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:iobs_res_1', mode='r', kwargs={'sharing': False}, manager_id='ee0695f1-6fc7-4c29-9ba9-c1ed9c622eaf'), but file is not already closed. This may indicate a bug. 116s if any(not isinstance(idx, index_type) for idx in indexes.values()): 116s 116s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 116s =========================== short test summary info ============================ 116s FAILED test/integration/test_integration__io.py::test_rasterio_environment - ... 116s = 1 failed, 440 passed, 44 deselected, 3 xfailed, 3 xpassed, 395 warnings in 12.13s = 116s E: pybuild pybuild:389: test: plugin pyproject failed with: exit code=1: cd /tmp/autopkgtest.SeD9fj/autopkgtest_tmp/build; python3.12 -m pytest -k "not test_clip_geojson__no_drop and not test_clip_geojson and not test_interpolate_na and not test_merge_datasets and not test_open_rasterio_mask_chunk_clip and not test_to_raster__different_dtype and not test_nonstandard_dims_write_coordinate_system__projected_ft" 116s pybuild-autopkgtest: error: pybuild --autopkgtest --test-pytest -i python{version} -p 3.12 returned exit code 13 116s make: *** [/tmp/edo5g5gSQF/run:4: pybuild-autopkgtest] Error 25 116s pybuild-autopkgtest: error: /tmp/edo5g5gSQF/run pybuild-autopkgtest returned exit code 2 116s autopkgtest [12:19:26]: test pybuild-autopkgtest: -----------------------] 117s autopkgtest [12:19:27]: test pybuild-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 117s pybuild-autopkgtest FAIL non-zero exit status 25 117s autopkgtest [12:19:27]: @@@@@@@@@@@@@@@@@@@@ summary 117s pybuild-autopkgtest FAIL non-zero exit status 25 128s nova [W] Skipping flock for amd64 128s Creating nova instance adt-plucky-amd64-python-rioxarray-20241204-121729-juju-7f2275-prod-proposed-migration-environment-15-238a6aa7-8101-456c-b715-d232dda9ff41 from image adt/ubuntu-plucky-amd64-server-20241204.img (UUID d72ead09-b488-4bdc-a490-f9f28101456f)...