0s autopkgtest [10:17:17]: starting date and time: 2024-11-20 10:17:17+0000 0s autopkgtest [10:17:17]: git checkout: 0acbae0a WIP show VirtSubproc stderr in real-time 0s autopkgtest [10:17:17]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.gqhwkdyh/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed --apt-upgrade python-prodigy --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-22.secgroup --name adt-plucky-amd64-python-prodigy-20241120-101717-juju-7f2275-prod-proposed-migration-environment-2-c03dc2e5-b689-4ac8-ab14-6995c63187da --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 42s autopkgtest [10:17:59]: testbed dpkg architecture: amd64 42s autopkgtest [10:17:59]: testbed apt version: 2.9.8 42s autopkgtest [10:17:59]: @@@@@@@@@@@@@@@@@@@@ test bed setup 43s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 44s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [841 kB] 44s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [13.5 kB] 44s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [56.4 kB] 44s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 44s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [91.6 kB] 44s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [47.1 kB] 44s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [32.6 kB] 44s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [262 kB] 44s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [683 kB] 44s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [772 B] 44s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [7272 B] 44s Fetched 2117 kB in 1s (2670 kB/s) 44s Reading package lists... 46s Reading package lists... 46s Building dependency tree... 46s Reading state information... 46s Calculating upgrade... 46s The following packages will be upgraded: 46s bpftrace curl fwupd-signed intel-microcode libaudit-common libaudit1 46s libcurl3t64-gnutls libcurl4t64 libselinux1 libsemanage-common libsemanage2 46s linux-base openssh-client openssh-server openssh-sftp-server python3-dbus 46s python3-gi python3-yaml 47s 18 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 47s Need to get 12.6 MB of archives. 47s After this operation, 1670 kB of additional disk space will be used. 47s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libselinux1 amd64 3.7-3ubuntu1 [86.9 kB] 47s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-sftp-server amd64 1:9.9p1-3ubuntu1 [41.2 kB] 47s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-server amd64 1:9.9p1-3ubuntu1 [625 kB] 47s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-client amd64 1:9.9p1-3ubuntu1 [1080 kB] 47s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit-common all 1:4.0.2-2ubuntu1 [6578 B] 47s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit1 amd64 1:4.0.2-2ubuntu1 [53.9 kB] 47s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage-common all 3.7-2build1 [7186 B] 47s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage2 amd64 3.7-2build1 [105 kB] 47s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dbus amd64 1.3.2-5build4 [110 kB] 47s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-3build1 [293 kB] 47s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-yaml amd64 6.0.2-1build1 [187 kB] 47s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 bpftrace amd64 0.21.2-2ubuntu3 [1787 kB] 47s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 curl amd64 8.9.1-2ubuntu3 [243 kB] 47s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4t64 amd64 8.9.1-2ubuntu3 [420 kB] 47s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 fwupd-signed amd64 1.55+1.7-1 [30.6 kB] 47s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl3t64-gnutls amd64 8.9.1-2ubuntu3 [412 kB] 47s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-base all 4.10.1ubuntu1 [34.8 kB] 47s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 intel-microcode amd64 3.20241112.1ubuntu1 [7056 kB] 48s Preconfiguring packages ... 48s Fetched 12.6 MB in 1s (12.8 MB/s) 48s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75620 files and directories currently installed.) 48s Preparing to unpack .../libselinux1_3.7-3ubuntu1_amd64.deb ... 48s Unpacking libselinux1:amd64 (3.7-3ubuntu1) over (3.5-2ubuntu5) ... 48s Setting up libselinux1:amd64 (3.7-3ubuntu1) ... 48s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75620 files and directories currently installed.) 48s Preparing to unpack .../openssh-sftp-server_1%3a9.9p1-3ubuntu1_amd64.deb ... 48s Unpacking openssh-sftp-server (1:9.9p1-3ubuntu1) over (1:9.7p1-7ubuntu5) ... 48s Preparing to unpack .../openssh-server_1%3a9.9p1-3ubuntu1_amd64.deb ... 48s Unpacking openssh-server (1:9.9p1-3ubuntu1) over (1:9.7p1-7ubuntu5) ... 48s Preparing to unpack .../openssh-client_1%3a9.9p1-3ubuntu1_amd64.deb ... 48s Unpacking openssh-client (1:9.9p1-3ubuntu1) over (1:9.7p1-7ubuntu5) ... 48s Preparing to unpack .../libaudit-common_1%3a4.0.2-2ubuntu1_all.deb ... 48s Unpacking libaudit-common (1:4.0.2-2ubuntu1) over (1:4.0.1-1ubuntu2) ... 48s Setting up libaudit-common (1:4.0.2-2ubuntu1) ... 48s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75622 files and directories currently installed.) 48s Preparing to unpack .../libaudit1_1%3a4.0.2-2ubuntu1_amd64.deb ... 48s Unpacking libaudit1:amd64 (1:4.0.2-2ubuntu1) over (1:4.0.1-1ubuntu2) ... 48s Setting up libaudit1:amd64 (1:4.0.2-2ubuntu1) ... 49s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75622 files and directories currently installed.) 49s Preparing to unpack .../libsemanage-common_3.7-2build1_all.deb ... 49s Unpacking libsemanage-common (3.7-2build1) over (3.5-1build6) ... 49s Setting up libsemanage-common (3.7-2build1) ... 49s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75621 files and directories currently installed.) 49s Preparing to unpack .../libsemanage2_3.7-2build1_amd64.deb ... 49s Unpacking libsemanage2:amd64 (3.7-2build1) over (3.5-1build6) ... 49s Setting up libsemanage2:amd64 (3.7-2build1) ... 49s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75621 files and directories currently installed.) 49s Preparing to unpack .../0-python3-dbus_1.3.2-5build4_amd64.deb ... 49s Unpacking python3-dbus (1.3.2-5build4) over (1.3.2-5build3) ... 49s Preparing to unpack .../1-python3-gi_3.50.0-3build1_amd64.deb ... 49s Unpacking python3-gi (3.50.0-3build1) over (3.50.0-3) ... 49s Preparing to unpack .../2-python3-yaml_6.0.2-1build1_amd64.deb ... 49s Unpacking python3-yaml (6.0.2-1build1) over (6.0.2-1) ... 49s Preparing to unpack .../3-bpftrace_0.21.2-2ubuntu3_amd64.deb ... 49s Unpacking bpftrace (0.21.2-2ubuntu3) over (0.21.2-2ubuntu2) ... 49s Preparing to unpack .../4-curl_8.9.1-2ubuntu3_amd64.deb ... 49s Unpacking curl (8.9.1-2ubuntu3) over (8.9.1-2ubuntu2) ... 49s Preparing to unpack .../5-libcurl4t64_8.9.1-2ubuntu3_amd64.deb ... 49s Unpacking libcurl4t64:amd64 (8.9.1-2ubuntu3) over (8.9.1-2ubuntu2) ... 49s Preparing to unpack .../6-fwupd-signed_1.55+1.7-1_amd64.deb ... 49s Unpacking fwupd-signed (1.55+1.7-1) over (1.54+1.6-1build1) ... 49s Preparing to unpack .../7-libcurl3t64-gnutls_8.9.1-2ubuntu3_amd64.deb ... 49s Unpacking libcurl3t64-gnutls:amd64 (8.9.1-2ubuntu3) over (8.9.1-2ubuntu2) ... 49s Preparing to unpack .../8-linux-base_4.10.1ubuntu1_all.deb ... 49s Unpacking linux-base (4.10.1ubuntu1) over (4.5ubuntu9) ... 49s Preparing to unpack .../9-intel-microcode_3.20241112.1ubuntu1_amd64.deb ... 49s Unpacking intel-microcode (3.20241112.1ubuntu1) over (3.20240910.0ubuntu1) ... 49s Setting up python3-dbus (1.3.2-5build4) ... 50s Setting up linux-base (4.10.1ubuntu1) ... 50s Setting up libcurl4t64:amd64 (8.9.1-2ubuntu3) ... 50s Setting up bpftrace (0.21.2-2ubuntu3) ... 50s Setting up openssh-client (1:9.9p1-3ubuntu1) ... 50s Setting up intel-microcode (3.20241112.1ubuntu1) ... 50s intel-microcode: microcode will be updated at next boot 50s Setting up libcurl3t64-gnutls:amd64 (8.9.1-2ubuntu3) ... 50s Setting up fwupd-signed (1.55+1.7-1) ... 50s Setting up python3-yaml (6.0.2-1build1) ... 50s Setting up python3-gi (3.50.0-3build1) ... 50s Setting up curl (8.9.1-2ubuntu3) ... 50s Setting up openssh-sftp-server (1:9.9p1-3ubuntu1) ... 50s Setting up openssh-server (1:9.9p1-3ubuntu1) ... 50s Installing new version of config file /etc/ssh/moduli ... 51s Processing triggers for ufw (0.36.2-8) ... 51s Processing triggers for man-db (2.13.0-1) ... 52s Processing triggers for libc-bin (2.40-1ubuntu3) ... 52s Processing triggers for initramfs-tools (0.142ubuntu35) ... 52s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic 52s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 60s Reading package lists... 60s Building dependency tree... 60s Reading state information... 60s 0 upgraded, 0 newly installed, 0 to remove and 48 not upgraded. 61s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 61s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 61s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 61s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 62s Reading package lists... 62s Reading package lists... 62s Building dependency tree... 62s Reading state information... 62s Calculating upgrade... 62s The following NEW packages will be installed: 62s libjemalloc2 linux-headers-6.11.0-9 linux-headers-6.11.0-9-generic 62s linux-image-6.11.0-9-generic linux-modules-6.11.0-9-generic 62s linux-modules-extra-6.11.0-9-generic linux-sysctl-defaults 62s linux-tools-6.11.0-9 linux-tools-6.11.0-9-generic python3-bcrypt 62s python3-jaraco.text 62s The following packages will be upgraded: 62s apt apt-utils distro-info ethtool gir1.2-girepository-2.0 gir1.2-glib-2.0 62s iputils-ping iputils-tracepath libapt-pkg6.0t64 libclang1-19 62s libgirepository-1.0-1 libglib2.0-0t64 libglib2.0-data libllvm19 liblzma5 62s libnftables1 libnftnl11 libpam-modules libpam-modules-bin libpam-runtime 62s libpam0g libpolkit-agent-1-0 libpolkit-gobject-1-0 libpython3-stdlib 62s libunwind8 libxml2 linux-generic linux-headers-generic linux-headers-virtual 62s linux-image-generic linux-image-virtual linux-libc-dev linux-tools-common 62s linux-virtual nftables pinentry-curses python-apt-common python3 python3-apt 62s python3-attr python3-cryptography python3-jsonschema-specifications 62s python3-minimal python3-pkg-resources python3-rpds-py python3-setuptools 62s tmux xz-utils 62s 48 upgraded, 11 newly installed, 0 to remove and 0 not upgraded. 62s Need to get 248 MB of archives. 62s After this operation, 322 MB of additional disk space will be used. 62s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 liblzma5 amd64 5.6.3-1 [156 kB] 63s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libapt-pkg6.0t64 amd64 2.9.12 [1097 kB] 63s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 apt amd64 2.9.12 [1381 kB] 63s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 apt-utils amd64 2.9.12 [218 kB] 63s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpam0g amd64 1.5.3-7ubuntu4 [69.6 kB] 63s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpam-modules-bin amd64 1.5.3-7ubuntu4 [53.7 kB] 63s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpam-modules amd64 1.5.3-7ubuntu4 [294 kB] 63s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-minimal amd64 3.12.7-1 [27.4 kB] 63s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3 amd64 3.12.7-1 [24.0 kB] 63s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpython3-stdlib amd64 3.12.7-1 [10.0 kB] 63s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpam-runtime all 1.5.3-7ubuntu4 [40.8 kB] 63s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 distro-info amd64 1.12 [20.0 kB] 63s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 gir1.2-girepository-2.0 amd64 1.82.0-2 [25.3 kB] 63s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 gir1.2-glib-2.0 amd64 2.82.2-3 [182 kB] 63s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libglib2.0-0t64 amd64 2.82.2-3 [1655 kB] 63s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libgirepository-1.0-1 amd64 1.82.0-2 [88.7 kB] 63s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 iputils-ping amd64 3:20240905-1 [46.8 kB] 63s Get:18 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libglib2.0-data all 2.82.2-3 [51.7 kB] 63s Get:19 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2build1 [772 kB] 63s Get:20 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python-apt-common all 2.9.0ubuntu2 [20.3 kB] 63s Get:21 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-apt amd64 2.9.0ubuntu2 [182 kB] 63s Get:22 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 ethtool amd64 1:6.11-1 [258 kB] 63s Get:23 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 iputils-tracepath amd64 3:20240905-1 [13.3 kB] 63s Get:24 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 nftables amd64 1.1.1-1build1 [71.3 kB] 63s Get:25 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libnftnl11 amd64 1.2.8-1 [70.5 kB] 63s Get:26 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libnftables1 amd64 1.1.1-1build1 [419 kB] 63s Get:27 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 xz-utils amd64 5.6.3-1 [276 kB] 63s Get:28 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libllvm19 amd64 1:19.1.3-2ubuntu2 [28.6 MB] 64s Get:29 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libclang1-19 amd64 1:19.1.3-2ubuntu2 [8246 kB] 64s Get:30 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjemalloc2 amd64 5.3.0-2build1 [256 kB] 64s Get:31 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpolkit-agent-1-0 amd64 125-2 [18.2 kB] 64s Get:32 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpolkit-gobject-1-0 amd64 125-2 [49.7 kB] 64s Get:33 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libunwind8 amd64 1.7.2-1 [64.3 kB] 64s Get:34 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 linux-modules-6.11.0-9-generic amd64 6.11.0-9.9 [40.6 MB] 66s Get:35 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 linux-image-6.11.0-9-generic amd64 6.11.0-9.9 [15.1 MB] 66s Get:36 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 linux-modules-extra-6.11.0-9-generic amd64 6.11.0-9.9 [118 MB] 69s Get:37 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 linux-generic amd64 6.11.0-9.9 [1734 B] 69s Get:38 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 linux-image-generic amd64 6.11.0-9.9 [10.8 kB] 69s Get:39 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 linux-virtual amd64 6.11.0-9.9 [1724 B] 69s Get:40 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 linux-image-virtual amd64 6.11.0-9.9 [10.8 kB] 69s Get:41 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 linux-headers-virtual amd64 6.11.0-9.9 [1644 B] 69s Get:42 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 linux-headers-6.11.0-9 all 6.11.0-9.9 [13.9 MB] 70s Get:43 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 linux-headers-6.11.0-9-generic amd64 6.11.0-9.9 [4109 kB] 70s Get:44 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 linux-headers-generic amd64 6.11.0-9.9 [10.7 kB] 70s Get:45 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 linux-libc-dev amd64 6.11.0-9.9 [1667 kB] 70s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-sysctl-defaults all 4.10.1ubuntu1 [5432 B] 70s Get:47 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 linux-tools-common all 6.11.0-9.9 [484 kB] 70s Get:48 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 linux-tools-6.11.0-9 amd64 6.11.0-9.9 [6201 kB] 70s Get:49 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 linux-tools-6.11.0-9-generic amd64 6.11.0-9.9 [1790 B] 70s Get:50 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 pinentry-curses amd64 1.3.1-0ubuntu1 [39.8 kB] 70s Get:51 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-attr all 24.2.0-1 [50.2 kB] 70s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-bcrypt amd64 4.2.0-2.1 [248 kB] 70s Get:53 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-cryptography amd64 43.0.0-1 [979 kB] 70s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jaraco.text all 4.0.0-1 [11.5 kB] 70s Get:55 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-rpds-py amd64 0.21.0-2ubuntu1 [323 kB] 70s Get:56 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-jsonschema-specifications all 2023.12.1-2 [9116 B] 70s Get:57 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-pkg-resources all 75.2.0-1 [134 kB] 70s Get:58 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-setuptools all 75.2.0-1 [657 kB] 70s Get:59 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 tmux amd64 3.5a-2 [563 kB] 70s Preconfiguring packages ... 70s Fetched 248 MB in 8s (30.5 MB/s) 71s (Reading database ... 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.../17-libclang1-19_1%3a19.1.3-2ubuntu2_amd64.deb ... 74s Unpacking libclang1-19 (1:19.1.3-2ubuntu2) over (1:19.1.2-1ubuntu1) ... 74s Selecting previously unselected package libjemalloc2:amd64. 74s Preparing to unpack .../18-libjemalloc2_5.3.0-2build1_amd64.deb ... 74s Unpacking libjemalloc2:amd64 (5.3.0-2build1) ... 74s Preparing to unpack .../19-libpolkit-agent-1-0_125-2_amd64.deb ... 74s Unpacking libpolkit-agent-1-0:amd64 (125-2) over (124-2ubuntu1) ... 74s Preparing to unpack .../20-libpolkit-gobject-1-0_125-2_amd64.deb ... 74s Unpacking libpolkit-gobject-1-0:amd64 (125-2) over (124-2ubuntu1) ... 74s Preparing to unpack .../21-libunwind8_1.7.2-1_amd64.deb ... 74s Unpacking libunwind8:amd64 (1.7.2-1) over (1.6.2-3.1) ... 74s Selecting previously unselected package linux-modules-6.11.0-9-generic. 74s Preparing to unpack .../22-linux-modules-6.11.0-9-generic_6.11.0-9.9_amd64.deb ... 74s Unpacking linux-modules-6.11.0-9-generic (6.11.0-9.9) ... 74s Selecting previously unselected package linux-image-6.11.0-9-generic. 75s Preparing to unpack .../23-linux-image-6.11.0-9-generic_6.11.0-9.9_amd64.deb ... 75s Unpacking linux-image-6.11.0-9-generic (6.11.0-9.9) ... 75s Selecting previously unselected package linux-modules-extra-6.11.0-9-generic. 75s Preparing to unpack .../24-linux-modules-extra-6.11.0-9-generic_6.11.0-9.9_amd64.deb ... 75s Unpacking linux-modules-extra-6.11.0-9-generic (6.11.0-9.9) ... 76s Preparing to unpack .../25-linux-generic_6.11.0-9.9_amd64.deb ... 76s Unpacking linux-generic (6.11.0-9.9) over (6.11.0-8.8) ... 76s Preparing to unpack .../26-linux-image-generic_6.11.0-9.9_amd64.deb ... 76s Unpacking linux-image-generic (6.11.0-9.9) over (6.11.0-8.8) ... 76s Preparing to unpack .../27-linux-virtual_6.11.0-9.9_amd64.deb ... 76s Unpacking linux-virtual (6.11.0-9.9) over (6.11.0-8.8) ... 76s Preparing to unpack .../28-linux-image-virtual_6.11.0-9.9_amd64.deb ... 76s Unpacking linux-image-virtual (6.11.0-9.9) over (6.11.0-8.8) ... 76s Preparing to unpack .../29-linux-headers-virtual_6.11.0-9.9_amd64.deb ... 76s Unpacking linux-headers-virtual (6.11.0-9.9) over (6.11.0-8.8) ... 76s Selecting previously unselected package linux-headers-6.11.0-9. 76s Preparing to unpack .../30-linux-headers-6.11.0-9_6.11.0-9.9_all.deb ... 76s Unpacking linux-headers-6.11.0-9 (6.11.0-9.9) ... 78s Selecting previously unselected package linux-headers-6.11.0-9-generic. 78s Preparing to unpack .../31-linux-headers-6.11.0-9-generic_6.11.0-9.9_amd64.deb ... 78s Unpacking linux-headers-6.11.0-9-generic (6.11.0-9.9) ... 79s Preparing to unpack .../32-linux-headers-generic_6.11.0-9.9_amd64.deb ... 79s Unpacking linux-headers-generic (6.11.0-9.9) over (6.11.0-8.8) ... 79s Preparing to unpack .../33-linux-libc-dev_6.11.0-9.9_amd64.deb ... 79s Unpacking linux-libc-dev:amd64 (6.11.0-9.9) over (6.11.0-8.8) ... 80s Selecting previously unselected package linux-sysctl-defaults. 80s Preparing to unpack .../34-linux-sysctl-defaults_4.10.1ubuntu1_all.deb ... 80s 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(75.2.0-1) over (74.1.2-1) ... 81s Preparing to unpack .../47-tmux_3.5a-2_amd64.deb ... 81s Unpacking tmux (3.5a-2) over (3.4-7) ... 81s Setting up pinentry-curses (1.3.1-0ubuntu1) ... 81s Setting up distro-info (1.12) ... 81s Setting up apt-utils (2.9.12) ... 81s Setting up linux-libc-dev:amd64 (6.11.0-9.9) ... 81s Setting up libnftnl11:amd64 (1.2.8-1) ... 81s Setting up libjemalloc2:amd64 (5.3.0-2build1) ... 81s Setting up libunwind8:amd64 (1.7.2-1) ... 81s Setting up libglib2.0-0t64:amd64 (2.82.2-3) ... 81s No schema files found: doing nothing. 81s Setting up libglib2.0-data (2.82.2-3) ... 81s Setting up linux-sysctl-defaults (4.10.1ubuntu1) ... 81s Setting up xz-utils (5.6.3-1) ... 81s Setting up linux-headers-6.11.0-9 (6.11.0-9.9) ... 81s Setting up gir1.2-glib-2.0:amd64 (2.82.2-3) ... 81s Setting up python-apt-common (2.9.0ubuntu2) ... 81s Setting up libgirepository-1.0-1:amd64 (1.82.0-2) ... 81s Setting up linux-tools-common (6.11.0-9.9) ... 81s Setting up iputils-ping (3:20240905-1) ... 81s Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2build1) ... 81s Setting up tmux (3.5a-2) ... 81s Setting up linux-modules-6.11.0-9-generic (6.11.0-9.9) ... 82s Setting up libpolkit-gobject-1-0:amd64 (125-2) ... 82s Setting up iputils-tracepath (3:20240905-1) ... 82s Setting up libpython3-stdlib:amd64 (3.12.7-1) ... 82s Setting up ethtool (1:6.11-1) ... 82s Setting up libllvm19:amd64 (1:19.1.3-2ubuntu2) ... 82s Setting up libnftables1:amd64 (1.1.1-1build1) ... 82s Setting up nftables (1.1.1-1build1) ... 83s Setting up libclang1-19 (1:19.1.3-2ubuntu2) ... 83s Setting up linux-modules-extra-6.11.0-9-generic (6.11.0-9.9) ... 84s Setting up python3 (3.12.7-1) ... 85s Setting up linux-headers-6.11.0-9-generic (6.11.0-9.9) ... 85s Setting up gir1.2-girepository-2.0:amd64 (1.82.0-2) ... 85s Setting up python3-jaraco.text (4.0.0-1) ... 85s Setting up linux-image-6.11.0-9-generic (6.11.0-9.9) ... 86s I: /boot/vmlinuz is now a symlink to vmlinuz-6.11.0-9-generic 86s I: /boot/initrd.img is now a symlink to initrd.img-6.11.0-9-generic 86s Setting up linux-tools-6.11.0-9 (6.11.0-9.9) ... 86s Setting up python3-rpds-py (0.21.0-2ubuntu1) ... 86s Setting up libpolkit-agent-1-0:amd64 (125-2) ... 86s Setting up linux-image-virtual (6.11.0-9.9) ... 86s Setting up python3-jsonschema-specifications (2023.12.1-2) ... 86s Setting up python3-pkg-resources (75.2.0-1) ... 87s Setting up linux-tools-6.11.0-9-generic (6.11.0-9.9) ... 87s Setting up python3-attr (24.2.0-1) ... 87s Setting up linux-image-generic (6.11.0-9.9) ... 87s Setting up python3-setuptools (75.2.0-1) ... 87s Setting up python3-apt (2.9.0ubuntu2) ... 87s Setting up python3-bcrypt (4.2.0-2.1) ... 88s Setting up linux-headers-generic (6.11.0-9.9) ... 88s Setting up python3-cryptography (43.0.0-1) ... 88s Setting up linux-headers-virtual (6.11.0-9.9) ... 88s Setting up linux-generic (6.11.0-9.9) ... 88s Setting up linux-virtual (6.11.0-9.9) ... 88s Processing triggers for libc-bin (2.40-1ubuntu3) ... 88s Processing triggers for man-db (2.13.0-1) ... 89s Processing triggers for debianutils (5.21) ... 89s Processing triggers for linux-image-6.11.0-9-generic (6.11.0-9.9) ... 89s /etc/kernel/postinst.d/initramfs-tools: 89s update-initramfs: Generating /boot/initrd.img-6.11.0-9-generic 89s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 96s /etc/kernel/postinst.d/zz-update-grub: 96s Sourcing file `/etc/default/grub' 96s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 96s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 96s Generating grub configuration file ... 96s Found linux image: /boot/vmlinuz-6.11.0-9-generic 96s Found initrd image: /boot/initrd.img-6.11.0-9-generic 96s Found linux image: /boot/vmlinuz-6.11.0-8-generic 96s Found initrd image: /boot/initrd.img-6.11.0-8-generic 96s Warning: os-prober will not be executed to detect other bootable partitions. 96s Systems on them will not be added to the GRUB boot configuration. 96s Check GRUB_DISABLE_OS_PROBER documentation entry. 96s Adding boot menu entry for UEFI Firmware Settings ... 96s done 97s Reading package lists... 97s Building dependency tree... 97s Reading state information... 97s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 98s autopkgtest [10:18:55]: rebooting testbed after setup commands that affected boot 102s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 115s autopkgtest [10:19:12]: testbed running kernel: Linux 6.11.0-9-generic #9-Ubuntu SMP PREEMPT_DYNAMIC Mon Oct 14 13:19:59 UTC 2024 118s autopkgtest [10:19:15]: @@@@@@@@@@@@@@@@@@@@ apt-source python-prodigy 120s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-prodigy 2.2.3-1 (dsc) [2228 B] 120s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-prodigy 2.2.3-1 (tar) [5709 kB] 120s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-prodigy 2.2.3-1 (diff) [1956 B] 120s gpgv: Signature made Mon Oct 7 11:27:29 2024 UTC 120s gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 120s gpgv: issuer "merkys@debian.org" 120s gpgv: Can't check signature: No public key 120s dpkg-source: warning: cannot verify inline signature for ./python-prodigy_2.2.3-1.dsc: no acceptable signature found 120s autopkgtest [10:19:17]: testing package python-prodigy version 2.2.3-1 121s autopkgtest [10:19:18]: build not needed 122s autopkgtest [10:19:19]: test pybuild-autopkgtest: preparing testbed 123s Reading package lists... 123s Building dependency tree... 123s Reading state information... 123s Starting pkgProblemResolver with broken count: 0 123s Starting 2 pkgProblemResolver with broken count: 0 123s Done 124s The following additional packages will be installed: 124s autoconf automake autopoint autotools-dev build-essential cpp cpp-14 124s cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu debhelper debugedit 124s dh-autoreconf dh-python dh-strip-nondeterminism dwz fontconfig-config 124s fonts-dejavu-core fonts-dejavu-mono fonts-urw-base35 g++ g++-14 124s g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 124s gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gettext help2man 124s intltool-debian libarchive-zip-perl libasan8 libblas3 libcairo2 libcc1-0 124s libdebhelper-perl libdeflate0 libfile-stripnondeterminism-perl 124s libfontconfig1 libfontenc1 libgcc-14-dev libgfortran5 libgomp1 124s libgraphite2-3 libharfbuzz0b libhwasan0 libimagequant0 libisl23 libitm1 124s libjbig0 libjpeg-turbo8 libjpeg8 liblapack3 liblcms2-2 liblerc4 liblsan0 124s libmpc3 libopenjp2-7 libpixman-1-0 libpython3.13-minimal 124s libpython3.13-stdlib libquadmath0 libraqm0 libsharpyuv0 libstdc++-14-dev 124s libtiff6 libtool libtsan2 libubsan1 libwebp7 libwebpdemux2 libwebpmux3 124s libxcb-render0 libxcb-shm0 libxrender1 m4 po-debconf 124s pybuild-plugin-autopkgtest pybuild-plugin-pyproject python3-all 124s python3-biopython python3-build python3-cairo python3-freesasa 124s python3-freetype python3-installer python3-numpy python3-packaging 124s python3-pil python3-poetry-core python3-prodigy python3-pyproject-hooks 124s python3-reportlab python3-rlpycairo python3-toml python3-wheel python3.13 124s python3.13-minimal sgml-base w3c-sgml-lib x11-common xfonts-encodings 124s xfonts-utils xml-core 124s Suggested packages: 124s autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-14-locales 124s cpp-14-doc dh-make flit fonts-freefont-otf | fonts-freefont-ttf 124s fonts-texgyre g++-multilib g++-14-multilib gcc-14-doc gcc-multilib 124s manpages-dev flex bison gdb gcc-doc gcc-14-multilib gdb-x86-64-linux-gnu 124s gettext-doc libasprintf-dev libgettextpo-dev liblcms2-utils libstdc++-14-doc 124s libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc libmail-box-perl 124s python3-tk bwa clustalo clustalw dialign dssp emboss fasttree mafft muscle3 124s phylip phyml prank probcons python3-mysqldb python3-matplotlib python3-mmtf 124s python3-rdflib python3-psycopg2 python3-scipy raxml samtools t-coffee wise 124s python3-pip python3-venv python-build-doc python-freesasa-doc 124s python-installer-doc gfortran python-numpy-doc python3-dev python3-pytest 124s python-pil-doc pdf-viewer python3-egenix-mxtexttools python-reportlab-doc 124s rl-accel rl-renderpm python3.13-venv python3.13-doc binfmt-support 124s sgml-base-doc 124s Recommended packages: 124s libarchive-cpio-perl libltdl-dev libmail-sendmail-perl python-biopython-doc 124s ncbi-blast+ python3-olefile fonts-dejavu-extra 124s The following NEW packages will be installed: 124s autoconf automake autopkgtest-satdep autopoint autotools-dev build-essential 124s cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu debhelper debugedit 124s dh-autoreconf dh-python dh-strip-nondeterminism dwz fontconfig-config 124s fonts-dejavu-core fonts-dejavu-mono fonts-urw-base35 g++ g++-14 124s g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 124s gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gettext help2man 124s intltool-debian libarchive-zip-perl libasan8 libblas3 libcairo2 libcc1-0 124s libdebhelper-perl libdeflate0 libfile-stripnondeterminism-perl 124s libfontconfig1 libfontenc1 libgcc-14-dev libgfortran5 libgomp1 124s libgraphite2-3 libharfbuzz0b libhwasan0 libimagequant0 libisl23 libitm1 124s libjbig0 libjpeg-turbo8 libjpeg8 liblapack3 liblcms2-2 liblerc4 liblsan0 124s libmpc3 libopenjp2-7 libpixman-1-0 libpython3.13-minimal 124s libpython3.13-stdlib libquadmath0 libraqm0 libsharpyuv0 libstdc++-14-dev 124s libtiff6 libtool libtsan2 libubsan1 libwebp7 libwebpdemux2 libwebpmux3 124s libxcb-render0 libxcb-shm0 libxrender1 m4 po-debconf 124s pybuild-plugin-autopkgtest pybuild-plugin-pyproject python3-all 124s python3-biopython python3-build python3-cairo python3-freesasa 124s python3-freetype python3-installer python3-numpy python3-packaging 124s python3-pil python3-poetry-core python3-prodigy python3-pyproject-hooks 124s python3-reportlab python3-rlpycairo python3-toml python3-wheel python3.13 124s python3.13-minimal sgml-base w3c-sgml-lib x11-common xfonts-encodings 124s xfonts-utils xml-core 124s 0 upgraded, 105 newly installed, 0 to remove and 0 not upgraded. 124s Need to get 106 MB/106 MB of archives. 124s After this operation, 367 MB of additional disk space will be used. 124s Get:1 /tmp/autopkgtest.tKV4Aw/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [820 B] 124s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.0-2 [879 kB] 124s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.0-2 [2188 kB] 124s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 sgml-base all 1.31 [11.4 kB] 124s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 m4 amd64 1.4.19-4build1 [244 kB] 125s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 autoconf all 2.72-3 [382 kB] 125s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 autotools-dev all 20220109.1 [44.9 kB] 125s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 automake all 1:1.16.5-1.3ubuntu1 [558 kB] 125s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 autopoint all 0.22.5-2 [616 kB] 125s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 125s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 125s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-8ubuntu1 [11.9 MB] 125s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-8ubuntu1 [1030 B] 125s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [5452 B] 125s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.1.0-2ubuntu1 [22.4 kB] 125s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 14.2.0-8ubuntu1 [47.6 kB] 125s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-8ubuntu1 [148 kB] 125s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 14.2.0-8ubuntu1 [29.1 kB] 125s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 14.2.0-8ubuntu1 [2998 kB] 125s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 14.2.0-8ubuntu1 [1317 kB] 125s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 14.2.0-8ubuntu1 [2732 kB] 125s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 14.2.0-8ubuntu1 [1177 kB] 125s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 14.2.0-8ubuntu1 [1634 kB] 125s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 14.2.0-8ubuntu1 [153 kB] 125s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-8ubuntu1 [2814 kB] 125s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-8ubuntu1 [23.3 MB] 126s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-8ubuntu1 [528 kB] 126s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1214 B] 126s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.1.0-2ubuntu1 [5000 B] 126s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-8ubuntu1 [2504 kB] 126s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-8ubuntu1 [13.3 MB] 127s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-8ubuntu1 [19.9 kB] 127s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [966 B] 127s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.1.0-2ubuntu1 [1100 B] 127s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 127s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebhelper-perl all 13.20ubuntu1 [94.2 kB] 127s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libtool all 2.4.7-8 [166 kB] 127s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 dh-autoreconf all 20 [16.1 kB] 127s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libarchive-zip-perl all 1.68-1 [90.2 kB] 127s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [20.1 kB] 127s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 dh-strip-nondeterminism all 1.14.0-1 [5058 B] 127s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 debugedit amd64 1:5.1-1 [46.9 kB] 127s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 dwz amd64 0.15-1build6 [115 kB] 127s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 gettext amd64 0.22.5-2 [948 kB] 127s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 intltool-debian all 0.35.0+20060710.6 [23.2 kB] 127s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 po-debconf all 1.0.21+nmu1 [233 kB] 127s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 debhelper all 13.20ubuntu1 [893 kB] 127s Get:48 http://ftpmaster.internal/ubuntu plucky/universe amd64 dh-python all 6.20241024 [112 kB] 127s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 127s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 127s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontenc1 amd64 1:1.1.8-1build1 [14.0 kB] 127s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 127s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB] 127s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 xfonts-utils amd64 1:7.7+7 [97.1 kB] 127s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-urw-base35 all 20200910-8 [11.0 MB] 128s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB] 128s Get:57 http://ftpmaster.internal/ubuntu plucky/universe amd64 help2man amd64 1.49.3 [201 kB] 128s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-3build2 [247 kB] 128s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB] 128s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 128s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 128s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 128s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 128s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 128s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.22-1 [64.5 kB] 128s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-8ubuntu1 [909 kB] 128s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 128s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.0.1-1 [540 kB] 128s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 libimagequant0 amd64 2.18.0-1build1 [36.3 kB] 128s Get:70 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 128s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 128s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-3build2 [2668 kB] 128s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 liblcms2-2 amd64 2.16-2 [212 kB] 128s Get:74 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 liblerc4 amd64 4.0.0+ds-5 [271 kB] 128s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.0-2 [2107 kB] 128s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libraqm0 amd64 0.10.1-1build1 [15.0 kB] 128s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [17.5 kB] 128s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 128s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.4.0-0.1 [231 kB] 128s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 128s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebpdemux2 amd64 1.4.0-0.1 [12.4 kB] 128s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebpmux3 amd64 1.4.0-0.1 [25.8 kB] 128s Get:83 http://ftpmaster.internal/ubuntu plucky/universe amd64 pybuild-plugin-autopkgtest all 6.20241024 [1746 B] 128s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-packaging all 24.2-1 [51.5 kB] 128s Get:85 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyproject-hooks all 1.2.0-1 [10.2 kB] 128s Get:86 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-toml all 0.10.2-1 [16.5 kB] 128s Get:87 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 python3-wheel all 0.45.0-1 [57.7 kB] 128s Get:88 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-build all 1.2.2-1 [31.0 kB] 128s Get:89 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-installer all 0.7.0+dfsg1-3 [17.4 kB] 128s Get:90 http://ftpmaster.internal/ubuntu plucky/universe amd64 pybuild-plugin-pyproject all 6.20241024 [1728 B] 128s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.0-2 [719 kB] 128s Get:92 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-all amd64 3.12.7-1 [890 B] 128s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-numpy amd64 1:1.26.4+ds-11ubuntu1 [5319 kB] 128s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 libopenjp2-7 amd64 2.5.0-2ubuntu1 [184 kB] 128s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-pil amd64 10.4.0-1ubuntu2 [580 kB] 128s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-cairo amd64 1.26.1-2build1 [143 kB] 128s Get:97 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-freetype all 2.5.1-1 [92.3 kB] 128s Get:98 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-rlpycairo all 0.3.0-3 [9130 B] 128s Get:99 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-reportlab all 4.2.5-1 [1107 kB] 129s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 xml-core all 0.19 [20.3 kB] 129s Get:101 http://ftpmaster.internal/ubuntu plucky/universe amd64 w3c-sgml-lib all 1.3-3 [280 kB] 129s Get:102 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-biopython amd64 1.84+dfsg-4build1 [1719 kB] 129s Get:103 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-freesasa amd64 2.1.0-3build4 [229 kB] 129s Get:104 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-poetry-core all 1.9.0-2build1 [203 kB] 129s Get:105 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-prodigy all 2.2.3-1 [15.7 kB] 129s Fetched 106 MB in 5s (19.9 MB/s) 130s Selecting previously unselected package libpython3.13-minimal:amd64. 130s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 114362 files and directories currently installed.) 130s Preparing to unpack .../000-libpython3.13-minimal_3.13.0-2_amd64.deb ... 130s Unpacking libpython3.13-minimal:amd64 (3.13.0-2) ... 130s Selecting previously unselected package python3.13-minimal. 130s Preparing to unpack .../001-python3.13-minimal_3.13.0-2_amd64.deb ... 130s Unpacking python3.13-minimal (3.13.0-2) ... 130s Selecting previously unselected package sgml-base. 130s Preparing to unpack .../002-sgml-base_1.31_all.deb ... 130s Unpacking sgml-base (1.31) ... 130s Selecting previously unselected package m4. 130s Preparing to unpack .../003-m4_1.4.19-4build1_amd64.deb ... 130s Unpacking m4 (1.4.19-4build1) ... 130s Selecting previously unselected package autoconf. 130s Preparing to unpack .../004-autoconf_2.72-3_all.deb ... 130s Unpacking autoconf (2.72-3) ... 130s Selecting previously unselected package autotools-dev. 130s Preparing to unpack .../005-autotools-dev_20220109.1_all.deb ... 130s Unpacking autotools-dev (20220109.1) ... 130s Selecting previously unselected package automake. 130s Preparing to unpack .../006-automake_1%3a1.16.5-1.3ubuntu1_all.deb ... 130s Unpacking automake (1:1.16.5-1.3ubuntu1) ... 130s Selecting previously unselected package autopoint. 130s Preparing to unpack .../007-autopoint_0.22.5-2_all.deb ... 130s Unpacking autopoint (0.22.5-2) ... 130s Selecting previously unselected package libisl23:amd64. 130s Preparing to unpack .../008-libisl23_0.27-1_amd64.deb ... 130s Unpacking libisl23:amd64 (0.27-1) ... 130s Selecting previously unselected package libmpc3:amd64. 130s Preparing to unpack .../009-libmpc3_1.3.1-1build2_amd64.deb ... 130s Unpacking libmpc3:amd64 (1.3.1-1build2) ... 130s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 130s Preparing to unpack .../010-cpp-14-x86-64-linux-gnu_14.2.0-8ubuntu1_amd64.deb ... 130s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ... 130s Selecting previously unselected package cpp-14. 130s Preparing to unpack .../011-cpp-14_14.2.0-8ubuntu1_amd64.deb ... 130s Unpacking cpp-14 (14.2.0-8ubuntu1) ... 130s Selecting previously unselected package cpp-x86-64-linux-gnu. 130s Preparing to unpack .../012-cpp-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 130s Unpacking cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 130s Selecting previously unselected package cpp. 130s Preparing to unpack .../013-cpp_4%3a14.1.0-2ubuntu1_amd64.deb ... 130s Unpacking cpp 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libtsan2:amd64. 131s Preparing to unpack .../019-libtsan2_14.2.0-8ubuntu1_amd64.deb ... 131s Unpacking libtsan2:amd64 (14.2.0-8ubuntu1) ... 131s Selecting previously unselected package libubsan1:amd64. 131s Preparing to unpack .../020-libubsan1_14.2.0-8ubuntu1_amd64.deb ... 131s Unpacking libubsan1:amd64 (14.2.0-8ubuntu1) ... 131s Selecting previously unselected package libhwasan0:amd64. 131s Preparing to unpack .../021-libhwasan0_14.2.0-8ubuntu1_amd64.deb ... 131s Unpacking libhwasan0:amd64 (14.2.0-8ubuntu1) ... 131s Selecting previously unselected package libquadmath0:amd64. 131s Preparing to unpack .../022-libquadmath0_14.2.0-8ubuntu1_amd64.deb ... 131s Unpacking libquadmath0:amd64 (14.2.0-8ubuntu1) ... 131s Selecting previously unselected package libgcc-14-dev:amd64. 131s Preparing to unpack .../023-libgcc-14-dev_14.2.0-8ubuntu1_amd64.deb ... 131s Unpacking libgcc-14-dev:amd64 (14.2.0-8ubuntu1) ... 131s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 131s Preparing to unpack .../024-gcc-14-x86-64-linux-gnu_14.2.0-8ubuntu1_amd64.deb ... 131s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ... 131s Selecting previously unselected package gcc-14. 131s Preparing to unpack .../025-gcc-14_14.2.0-8ubuntu1_amd64.deb ... 131s Unpacking gcc-14 (14.2.0-8ubuntu1) ... 131s Selecting previously unselected package gcc-x86-64-linux-gnu. 131s Preparing to unpack .../026-gcc-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 131s Unpacking gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 131s Selecting previously unselected package gcc. 131s Preparing to unpack .../027-gcc_4%3a14.1.0-2ubuntu1_amd64.deb ... 131s Unpacking gcc (4:14.1.0-2ubuntu1) ... 131s Selecting previously unselected package libstdc++-14-dev:amd64. 131s Preparing to unpack .../028-libstdc++-14-dev_14.2.0-8ubuntu1_amd64.deb ... 131s Unpacking libstdc++-14-dev:amd64 (14.2.0-8ubuntu1) ... 132s Selecting previously unselected package g++-14-x86-64-linux-gnu. 132s Preparing to unpack .../029-g++-14-x86-64-linux-gnu_14.2.0-8ubuntu1_amd64.deb ... 132s Unpacking g++-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ... 132s Selecting previously unselected package g++-14. 132s Preparing to unpack .../030-g++-14_14.2.0-8ubuntu1_amd64.deb ... 132s Unpacking g++-14 (14.2.0-8ubuntu1) ... 132s Selecting previously unselected package g++-x86-64-linux-gnu. 132s Preparing to unpack .../031-g++-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 132s Unpacking g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 132s Selecting previously unselected package g++. 132s Preparing to unpack .../032-g++_4%3a14.1.0-2ubuntu1_amd64.deb ... 132s Unpacking g++ (4:14.1.0-2ubuntu1) ... 132s Selecting previously unselected package build-essential. 132s Preparing to unpack .../033-build-essential_12.10ubuntu1_amd64.deb ... 132s Unpacking build-essential (12.10ubuntu1) ... 132s Selecting previously unselected package libdebhelper-perl. 132s Preparing to unpack .../034-libdebhelper-perl_13.20ubuntu1_all.deb ... 132s Unpacking libdebhelper-perl (13.20ubuntu1) ... 132s Selecting previously unselected package libtool. 132s Preparing to unpack .../035-libtool_2.4.7-8_all.deb ... 132s Unpacking libtool (2.4.7-8) ... 132s Selecting previously unselected package dh-autoreconf. 132s Preparing to unpack .../036-dh-autoreconf_20_all.deb ... 132s Unpacking dh-autoreconf (20) ... 132s Selecting previously unselected package libarchive-zip-perl. 132s Preparing to unpack .../037-libarchive-zip-perl_1.68-1_all.deb ... 132s Unpacking libarchive-zip-perl (1.68-1) ... 132s Selecting previously unselected package libfile-stripnondeterminism-perl. 132s Preparing to unpack .../038-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... 132s Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... 132s Selecting previously unselected package dh-strip-nondeterminism. 132s Preparing to unpack .../039-dh-strip-nondeterminism_1.14.0-1_all.deb ... 132s Unpacking dh-strip-nondeterminism (1.14.0-1) ... 132s Selecting previously unselected package debugedit. 132s Preparing to unpack .../040-debugedit_1%3a5.1-1_amd64.deb ... 132s Unpacking debugedit (1:5.1-1) ... 132s Selecting previously unselected package dwz. 132s Preparing to unpack .../041-dwz_0.15-1build6_amd64.deb ... 132s Unpacking dwz (0.15-1build6) ... 132s Selecting previously unselected package gettext. 132s Preparing to unpack .../042-gettext_0.22.5-2_amd64.deb ... 132s Unpacking gettext (0.22.5-2) ... 132s Selecting previously unselected package intltool-debian. 132s Preparing to unpack .../043-intltool-debian_0.35.0+20060710.6_all.deb ... 132s Unpacking intltool-debian (0.35.0+20060710.6) ... 132s Selecting previously unselected package po-debconf. 132s Preparing to unpack .../044-po-debconf_1.0.21+nmu1_all.deb ... 132s Unpacking po-debconf (1.0.21+nmu1) ... 132s Selecting previously unselected package debhelper. 132s Preparing to unpack .../045-debhelper_13.20ubuntu1_all.deb ... 132s Unpacking debhelper (13.20ubuntu1) ... 132s Selecting previously unselected package dh-python. 132s Preparing to unpack .../046-dh-python_6.20241024_all.deb ... 132s Unpacking dh-python (6.20241024) ... 132s Selecting previously unselected package fonts-dejavu-mono. 132s Preparing to unpack .../047-fonts-dejavu-mono_2.37-8_all.deb ... 132s Unpacking fonts-dejavu-mono (2.37-8) ... 132s Selecting previously unselected package fonts-dejavu-core. 133s Preparing to unpack .../048-fonts-dejavu-core_2.37-8_all.deb ... 133s Unpacking fonts-dejavu-core (2.37-8) ... 133s Selecting previously unselected package libfontenc1:amd64. 133s Preparing to unpack .../049-libfontenc1_1%3a1.1.8-1build1_amd64.deb ... 133s Unpacking libfontenc1:amd64 (1:1.1.8-1build1) ... 133s Selecting previously unselected package x11-common. 133s Preparing to unpack .../050-x11-common_1%3a7.7+23ubuntu3_all.deb ... 133s Unpacking x11-common (1:7.7+23ubuntu3) ... 133s Selecting previously unselected package xfonts-encodings. 133s Preparing to unpack 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previously unselected package libcairo2:amd64. 133s Preparing to unpack .../062-libcairo2_1.18.2-2_amd64.deb ... 133s Unpacking libcairo2:amd64 (1.18.2-2) ... 133s Selecting previously unselected package libdeflate0:amd64. 133s Preparing to unpack .../063-libdeflate0_1.22-1_amd64.deb ... 133s Unpacking libdeflate0:amd64 (1.22-1) ... 133s Selecting previously unselected package libgfortran5:amd64. 133s Preparing to unpack .../064-libgfortran5_14.2.0-8ubuntu1_amd64.deb ... 133s Unpacking libgfortran5:amd64 (14.2.0-8ubuntu1) ... 133s Selecting previously unselected package libgraphite2-3:amd64. 133s Preparing to unpack .../065-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 133s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 133s Selecting previously unselected package libharfbuzz0b:amd64. 133s Preparing to unpack .../066-libharfbuzz0b_10.0.1-1_amd64.deb ... 133s Unpacking libharfbuzz0b:amd64 (10.0.1-1) ... 133s Selecting previously unselected package libimagequant0:amd64. 133s 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134s Unpacking liblerc4:amd64 (4.0.0+ds-5) ... 134s Selecting previously unselected package libpython3.13-stdlib:amd64. 134s Preparing to unpack .../073-libpython3.13-stdlib_3.13.0-2_amd64.deb ... 134s Unpacking libpython3.13-stdlib:amd64 (3.13.0-2) ... 134s Selecting previously unselected package libraqm0:amd64. 134s Preparing to unpack .../074-libraqm0_0.10.1-1build1_amd64.deb ... 134s Unpacking libraqm0:amd64 (0.10.1-1build1) ... 134s Selecting previously unselected package libsharpyuv0:amd64. 134s Preparing to unpack .../075-libsharpyuv0_1.4.0-0.1_amd64.deb ... 134s Unpacking libsharpyuv0:amd64 (1.4.0-0.1) ... 134s Selecting previously unselected package libjbig0:amd64. 134s Preparing to unpack .../076-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 134s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 134s Selecting previously unselected package libwebp7:amd64. 134s Preparing to unpack .../077-libwebp7_1.4.0-0.1_amd64.deb ... 134s Unpacking libwebp7:amd64 (1.4.0-0.1) ... 134s Selecting previously unselected package libtiff6:amd64. 134s Preparing to unpack .../078-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ... 134s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 134s Selecting previously unselected package libwebpdemux2:amd64. 134s Preparing to unpack .../079-libwebpdemux2_1.4.0-0.1_amd64.deb ... 134s Unpacking libwebpdemux2:amd64 (1.4.0-0.1) ... 134s Selecting previously unselected package libwebpmux3:amd64. 134s Preparing to unpack .../080-libwebpmux3_1.4.0-0.1_amd64.deb ... 134s Unpacking libwebpmux3:amd64 (1.4.0-0.1) ... 134s Selecting previously unselected package pybuild-plugin-autopkgtest. 134s Preparing to unpack .../081-pybuild-plugin-autopkgtest_6.20241024_all.deb ... 134s Unpacking pybuild-plugin-autopkgtest (6.20241024) ... 134s Selecting previously unselected package python3-packaging. 134s Preparing to unpack .../082-python3-packaging_24.2-1_all.deb ... 134s Unpacking python3-packaging (24.2-1) ... 134s Selecting previously unselected package 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python3-pil:amd64 (10.4.0-1ubuntu2) ... 135s Selecting previously unselected package python3-cairo. 135s Preparing to unpack .../094-python3-cairo_1.26.1-2build1_amd64.deb ... 135s Unpacking python3-cairo (1.26.1-2build1) ... 135s Selecting previously unselected package python3-freetype. 135s Preparing to unpack .../095-python3-freetype_2.5.1-1_all.deb ... 135s Unpacking python3-freetype (2.5.1-1) ... 135s Selecting previously unselected package python3-rlpycairo. 135s Preparing to unpack .../096-python3-rlpycairo_0.3.0-3_all.deb ... 135s Unpacking python3-rlpycairo (0.3.0-3) ... 135s Selecting previously unselected package python3-reportlab. 135s Preparing to unpack .../097-python3-reportlab_4.2.5-1_all.deb ... 135s Unpacking python3-reportlab (4.2.5-1) ... 135s Selecting previously unselected package xml-core. 135s Preparing to unpack .../098-xml-core_0.19_all.deb ... 135s Unpacking xml-core (0.19) ... 135s Selecting previously unselected package w3c-sgml-lib. 135s Preparing to 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autopkgtest-satdep (0) ... 135s Setting up dh-python (6.20241024) ... 135s Setting up libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 135s Setting up liblcms2-2:amd64 (2.16-2) ... 135s Setting up libpixman-1-0:amd64 (0.44.0-3) ... 135s Setting up libsharpyuv0:amd64 (1.4.0-0.1) ... 135s Setting up liblerc4:amd64 (4.0.0+ds-5) ... 135s Setting up libxrender1:amd64 (1:0.9.10-1.1build1) ... 135s Setting up libxcb-render0:amd64 (1.17.0-2) ... 135s Setting up libarchive-zip-perl (1.68-1) ... 135s Setting up libdebhelper-perl (13.20ubuntu1) ... 135s Setting up x11-common (1:7.7+23ubuntu3) ... 136s Setting up libdeflate0:amd64 (1.22-1) ... 136s Setting up m4 (1.4.19-4build1) ... 136s Setting up libxcb-shm0:amd64 (1.17.0-2) ... 136s Setting up libgomp1:amd64 (14.2.0-8ubuntu1) ... 136s Setting up python3-freetype (2.5.1-1) ... 136s Setting up python3-wheel (0.45.0-1) ... 136s Setting up libjbig0:amd64 (2.1-6.1ubuntu2) ... 136s Setting up help2man (1.49.3) ... 136s Setting up libpython3.13-minimal:amd64 (3.13.0-2) ... 136s Setting up python3-freesasa (2.1.0-3build4) ... 136s Setting up libfontenc1:amd64 (1:1.1.8-1build1) ... 136s Setting up autotools-dev (20220109.1) ... 136s Setting up libblas3:amd64 (3.12.0-3build2) ... 136s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 136s Setting up python3-packaging (24.2-1) ... 136s Setting up python3-pyproject-hooks (1.2.0-1) ... 137s Setting up python3-poetry-core (1.9.0-2build1) ... 137s Setting up xfonts-encodings (1:1.0.5-0ubuntu2) ... 137s Setting up libquadmath0:amd64 (14.2.0-8ubuntu1) ... 137s Setting up libimagequant0:amd64 (2.18.0-1build1) ... 137s Setting up fonts-dejavu-mono (2.37-8) ... 137s Setting up libmpc3:amd64 (1.3.1-1build2) ... 137s Setting up autopoint (0.22.5-2) ... 137s Setting up fonts-dejavu-core (2.37-8) ... 137s Setting up libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 137s Setting up python3-toml (0.10.2-1) ... 137s Setting up python3-installer (0.7.0+dfsg1-3) ... 137s Setting up libgfortran5:amd64 (14.2.0-8ubuntu1) ... 137s Setting up autoconf (2.72-3) ... 137s Setting up libwebp7:amd64 (1.4.0-0.1) ... 137s Setting up libubsan1:amd64 (14.2.0-8ubuntu1) ... 137s Setting up dwz (0.15-1build6) ... 137s Setting up libhwasan0:amd64 (14.2.0-8ubuntu1) ... 137s Setting up libasan8:amd64 (14.2.0-8ubuntu1) ... 137s Setting up debugedit (1:5.1-1) ... 137s Setting up libopenjp2-7:amd64 (2.5.0-2ubuntu1) ... 137s Setting up python3.13-minimal (3.13.0-2) ... 138s Setting up libharfbuzz0b:amd64 (10.0.1-1) ... 138s Setting up sgml-base (1.31) ... 138s Setting up libtsan2:amd64 (14.2.0-8ubuntu1) ... 138s Setting up libisl23:amd64 (0.27-1) ... 138s Setting up python3-build (1.2.2-1) ... 138s Setting up libwebpmux3:amd64 (1.4.0-0.1) ... 138s Setting up libpython3.13-stdlib:amd64 (3.13.0-2) ... 138s Setting up libcc1-0:amd64 (14.2.0-8ubuntu1) ... 138s Setting up liblsan0:amd64 (14.2.0-8ubuntu1) ... 138s Setting up libitm1:amd64 (14.2.0-8ubuntu1) ... 138s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 138s Setting up automake (1:1.16.5-1.3ubuntu1) ... 138s update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode 138s Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... 138s Setting up liblapack3:amd64 (3.12.0-3build2) ... 138s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 138s Setting up gettext (0.22.5-2) ... 138s Setting up python3.13 (3.13.0-2) ... 139s Setting up pybuild-plugin-pyproject (6.20241024) ... 139s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 139s Setting up libwebpdemux2:amd64 (1.4.0-0.1) ... 139s Setting up python3-all (3.12.7-1) ... 139s Setting up xfonts-utils (1:7.7+7) ... 139s Setting up intltool-debian (0.35.0+20060710.6) ... 139s Setting up libraqm0:amd64 (0.10.1-1build1) ... 139s Setting up cpp-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ... 139s Setting up python3-numpy (1:1.26.4+ds-11ubuntu1) ... 142s Setting up cpp-14 (14.2.0-8ubuntu1) ... 142s Setting up dh-strip-nondeterminism (1.14.0-1) ... 142s Setting up libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 142s Setting up xml-core (0.19) ... 142s Setting up libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ... 142s Setting up libgcc-14-dev:amd64 (14.2.0-8ubuntu1) ... 142s Setting up libstdc++-14-dev:amd64 (14.2.0-8ubuntu1) ... 142s Setting up cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 142s Setting up po-debconf (1.0.21+nmu1) ... 142s Setting up fonts-urw-base35 (20200910-8) ... 143s Setting up libcairo2:amd64 (1.18.2-2) ... 143s Setting up python3-pil:amd64 (10.4.0-1ubuntu2) ... 143s Setting up cpp (4:14.1.0-2ubuntu1) ... 143s Setting up gcc-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ... 143s Setting up python3-cairo (1.26.1-2build1) ... 143s Setting up gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 143s Setting up gcc-14 (14.2.0-8ubuntu1) ... 143s Setting up python3-rlpycairo (0.3.0-3) ... 143s Setting up g++-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ... 143s Setting up python3-reportlab (4.2.5-1) ... 145s Setting up g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 145s Setting up g++-14 (14.2.0-8ubuntu1) ... 145s Setting up libtool (2.4.7-8) ... 145s Setting up gcc (4:14.1.0-2ubuntu1) ... 145s Setting up dh-autoreconf (20) ... 145s Setting up g++ (4:14.1.0-2ubuntu1) ... 145s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 145s Setting up build-essential (12.10ubuntu1) ... 145s Setting up debhelper (13.20ubuntu1) ... 145s Setting up pybuild-plugin-autopkgtest (6.20241024) ... 145s Processing triggers for libc-bin (2.40-1ubuntu3) ... 145s Processing triggers for systemd (256.5-2ubuntu4) ... 145s Processing triggers for man-db (2.13.0-1) ... 146s Processing triggers for install-info (7.1.1-1) ... 146s Processing triggers for sgml-base (1.31) ... 146s Setting up w3c-sgml-lib (1.3-3) ... 170s Setting up python3-biopython (1.84+dfsg-4build1) ... 172s Setting up python3-prodigy (2.2.3-1) ... 172s Setting up autopkgtest-satdep (0) ... 175s (Reading database ... 121226 files and directories currently installed.) 175s Removing autopkgtest-satdep (0) ... 176s autopkgtest [10:20:13]: test pybuild-autopkgtest: pybuild-autopkgtest 176s autopkgtest [10:20:13]: test pybuild-autopkgtest: [----------------------- 176s pybuild-autopkgtest 176s I: pybuild base:311: cd /tmp/autopkgtest.tKV4Aw/autopkgtest_tmp/build; python3.13 -m unittest discover -v 177s test_dataset (tests.test_prodigy.ProdigyOutputTest.test_dataset) 192s Test method to compare prediction for 80 dataset cases with ... Deltas: 192s ba_val max: 1.03% 192s ba_val mean: 0.29% 192s nis_a max: 0.53% 192s nis_a mean: 0.02% 192s nis_c max: 0.44% 192s nis_c mean: 0.02% 192s ok 192s 192s ---------------------------------------------------------------------- 192s Ran 1 test in 15.516s 192s 192s OK 192s I: pybuild base:311: cd /tmp/autopkgtest.tKV4Aw/autopkgtest_tmp/build; python3.12 -m unittest discover -v 193s test_dataset (tests.test_prodigy.ProdigyOutputTest.test_dataset) 209s Test method to compare prediction for 80 dataset cases with ... ok 209s 209s ---------------------------------------------------------------------- 209s Ran 1 test in 16.713s 209s 209s OK 209s Deltas: 209s ba_val max: 1.03% 209s ba_val mean: 0.29% 209s nis_a max: 0.53% 209s nis_a mean: 0.02% 209s nis_c max: 0.44% 209s nis_c mean: 0.02% 210s autopkgtest [10:20:47]: test pybuild-autopkgtest: -----------------------] 210s autopkgtest [10:20:47]: test pybuild-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 210s pybuild-autopkgtest PASS 210s autopkgtest [10:20:47]: @@@@@@@@@@@@@@@@@@@@ summary 210s pybuild-autopkgtest PASS 222s virt: nova [W] Skipping flock for amd64 222s virt: Creating nova instance adt-plucky-amd64-python-prodigy-20241120-101717-juju-7f2275-prod-proposed-migration-environment-2-c03dc2e5-b689-4ac8-ab14-6995c63187da from image adt/ubuntu-plucky-amd64-server-20241119.img (UUID 2e5306de-7efa-448c-bc27-5518979e66f0)...