0s autopkgtest [05:46:18]: starting date and time: 2024-11-14 05:46:18+0000 0s autopkgtest [05:46:18]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [05:46:18]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ctrrsk_5/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade python-leidenalg --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-27.secgroup --name adt-plucky-amd64-python-leidenalg-20241114-054618-juju-7f2275-prod-proposed-migration-environment-20-1ecd362e-326d-4823-819e-9fe48388e21e --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 1279s autopkgtest [06:07:37]: testbed dpkg architecture: amd64 1279s autopkgtest [06:07:37]: testbed apt version: 2.9.8 1279s autopkgtest [06:07:37]: @@@@@@@@@@@@@@@@@@@@ test bed setup 1280s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 1280s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 1280s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [98.6 kB] 1280s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [987 kB] 1280s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.4 kB] 1280s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [135 kB] 1280s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [75.0 kB] 1280s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [32.6 kB] 1280s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [285 kB] 1281s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [755 kB] 1281s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [9252 B] 1281s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [1084 B] 1281s Fetched 2474 kB in 1s (2963 kB/s) 1281s Reading package lists... 1283s Reading package lists... 1283s Building dependency tree... 1283s Reading state information... 1283s Calculating upgrade... 1283s The following NEW packages will be installed: 1283s python3.13-gdbm 1283s The following packages will be upgraded: 1283s bpfcc-tools bpftrace libbpfcc libgnutls30t64 libgpgme11t64 1283s libjson-glib-1.0-0 libjson-glib-1.0-common libnewt0.52 libpython3-stdlib 1283s libutempter0 python3 python3-bpfcc python3-gdbm python3-minimal python3-newt 1283s whiptail 1284s 16 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 1284s Need to get 4731 kB of archives. 1284s After this operation, 608 kB of additional disk space will be used. 1284s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-minimal amd64 3.12.7-1 [27.4 kB] 1284s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3 amd64 3.12.7-1 [24.0 kB] 1284s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpython3-stdlib amd64 3.12.7-1 [10.0 kB] 1284s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libgnutls30t64 amd64 3.8.8-2ubuntu1 [1085 kB] 1284s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-newt amd64 0.52.24-2ubuntu4 [21.4 kB] 1284s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libnewt0.52 amd64 0.52.24-2ubuntu4 [55.4 kB] 1284s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 whiptail amd64 0.52.24-2ubuntu4 [19.0 kB] 1284s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-gdbm amd64 3.13.0-2 [31.3 kB] 1284s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-gdbm amd64 3.12.7-1 [8642 B] 1284s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libbpfcc amd64 0.30.0+ds-1ubuntu5 [680 kB] 1284s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-bpfcc all 0.30.0+ds-1ubuntu5 [40.4 kB] 1284s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 bpfcc-tools all 0.30.0+ds-1ubuntu5 [697 kB] 1284s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 bpftrace amd64 0.21.2-2ubuntu2 [1791 kB] 1284s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libgpgme11t64 amd64 1.23.2-5ubuntu4 [152 kB] 1284s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libjson-glib-1.0-common all 1.10.0+ds-3 [5586 B] 1284s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libjson-glib-1.0-0 amd64 1.10.0+ds-3 [73.1 kB] 1284s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libutempter0 amd64 1.2.1-4 [9694 B] 1284s Fetched 4731 kB in 1s (6357 kB/s) 1285s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75541 files and directories currently installed.) 1285s Preparing to unpack .../python3-minimal_3.12.7-1_amd64.deb ... 1285s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 1285s Setting up python3-minimal (3.12.7-1) ... 1285s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75541 files and directories currently installed.) 1285s Preparing to unpack .../python3_3.12.7-1_amd64.deb ... 1285s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 1285s Preparing to unpack .../libpython3-stdlib_3.12.7-1_amd64.deb ... 1285s Unpacking libpython3-stdlib:amd64 (3.12.7-1) over (3.12.6-0ubuntu1) ... 1285s Preparing to unpack .../libgnutls30t64_3.8.8-2ubuntu1_amd64.deb ... 1285s Unpacking libgnutls30t64:amd64 (3.8.8-2ubuntu1) over (3.8.6-2ubuntu1) ... 1285s Setting up libgnutls30t64:amd64 (3.8.8-2ubuntu1) ... 1285s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75541 files and directories currently installed.) 1285s Preparing to unpack .../00-python3-newt_0.52.24-2ubuntu4_amd64.deb ... 1285s Unpacking python3-newt:amd64 (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 1285s Preparing to unpack .../01-libnewt0.52_0.52.24-2ubuntu4_amd64.deb ... 1285s Unpacking libnewt0.52:amd64 (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 1285s Preparing to unpack .../02-whiptail_0.52.24-2ubuntu4_amd64.deb ... 1285s Unpacking whiptail (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 1285s Selecting previously unselected package python3.13-gdbm. 1285s Preparing to unpack .../03-python3.13-gdbm_3.13.0-2_amd64.deb ... 1285s Unpacking python3.13-gdbm (3.13.0-2) ... 1285s Preparing to unpack .../04-python3-gdbm_3.12.7-1_amd64.deb ... 1285s Unpacking python3-gdbm:amd64 (3.12.7-1) over (3.12.6-1ubuntu1) ... 1285s Preparing to unpack .../05-libbpfcc_0.30.0+ds-1ubuntu5_amd64.deb ... 1285s Unpacking libbpfcc:amd64 (0.30.0+ds-1ubuntu5) over (0.30.0+ds-1ubuntu4) ... 1285s Preparing to unpack .../06-python3-bpfcc_0.30.0+ds-1ubuntu5_all.deb ... 1285s Unpacking python3-bpfcc (0.30.0+ds-1ubuntu5) over (0.30.0+ds-1ubuntu4) ... 1285s Preparing to unpack .../07-bpfcc-tools_0.30.0+ds-1ubuntu5_all.deb ... 1285s Unpacking bpfcc-tools (0.30.0+ds-1ubuntu5) over (0.30.0+ds-1ubuntu4) ... 1285s Preparing to unpack .../08-bpftrace_0.21.2-2ubuntu2_amd64.deb ... 1285s Unpacking bpftrace (0.21.2-2ubuntu2) over (0.21.2-2) ... 1285s Preparing to unpack .../09-libgpgme11t64_1.23.2-5ubuntu4_amd64.deb ... 1285s Unpacking libgpgme11t64:amd64 (1.23.2-5ubuntu4) over (1.18.0-4.1ubuntu4) ... 1285s Preparing to unpack .../10-libjson-glib-1.0-common_1.10.0+ds-3_all.deb ... 1285s Unpacking libjson-glib-1.0-common (1.10.0+ds-3) over (1.10.0+ds-2) ... 1285s Preparing to unpack .../11-libjson-glib-1.0-0_1.10.0+ds-3_amd64.deb ... 1285s Unpacking libjson-glib-1.0-0:amd64 (1.10.0+ds-3) over (1.10.0+ds-2) ... 1285s Preparing to unpack .../12-libutempter0_1.2.1-4_amd64.deb ... 1285s Unpacking libutempter0:amd64 (1.2.1-4) over (1.2.1-3build1) ... 1285s Setting up libnewt0.52:amd64 (0.52.24-2ubuntu4) ... 1285s Setting up libutempter0:amd64 (1.2.1-4) ... 1285s Setting up whiptail (0.52.24-2ubuntu4) ... 1285s Setting up libjson-glib-1.0-common (1.10.0+ds-3) ... 1285s Setting up libgpgme11t64:amd64 (1.23.2-5ubuntu4) ... 1285s Setting up libbpfcc:amd64 (0.30.0+ds-1ubuntu5) ... 1285s Setting up python3.13-gdbm (3.13.0-2) ... 1285s Setting up libpython3-stdlib:amd64 (3.12.7-1) ... 1285s Setting up bpftrace (0.21.2-2ubuntu2) ... 1285s Setting up python3 (3.12.7-1) ... 1286s Setting up python3-newt:amd64 (0.52.24-2ubuntu4) ... 1286s Setting up libjson-glib-1.0-0:amd64 (1.10.0+ds-3) ... 1286s Setting up python3-bpfcc (0.30.0+ds-1ubuntu5) ... 1286s Setting up python3-gdbm:amd64 (3.12.7-1) ... 1286s Setting up bpfcc-tools (0.30.0+ds-1ubuntu5) ... 1286s Processing triggers for man-db (2.12.1-3) ... 1287s Processing triggers for libc-bin (2.40-1ubuntu3) ... 1287s Reading package lists... 1287s Building dependency tree... 1287s Reading state information... 1287s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1288s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 1288s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 1288s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 1288s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 1289s Reading package lists... 1289s Reading package lists... 1289s Building dependency tree... 1289s Reading state information... 1289s Calculating upgrade... 1289s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1289s Reading package lists... 1289s Building dependency tree... 1289s Reading state information... 1289s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1292s autopkgtest [06:07:50]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 13:41:20 UTC 2024 1292s autopkgtest [06:07:50]: @@@@@@@@@@@@@@@@@@@@ apt-source python-leidenalg 1294s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-leidenalg 0.10.2-2 (dsc) [2576 B] 1294s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-leidenalg 0.10.2-2 (tar) [450 kB] 1294s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-leidenalg 0.10.2-2 (diff) [3828 B] 1294s gpgv: Signature made Wed Oct 16 09:56:37 2024 UTC 1294s gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA 1294s gpgv: issuer "emollier@debian.org" 1294s gpgv: Can't check signature: No public key 1294s dpkg-source: warning: cannot verify inline signature for ./python-leidenalg_0.10.2-2.dsc: no acceptable signature found 1294s autopkgtest [06:07:52]: testing package python-leidenalg version 0.10.2-2 1294s autopkgtest [06:07:52]: build not needed 1295s autopkgtest [06:07:53]: test run-unit-test: preparing testbed 1298s Reading package lists... 1298s Building dependency tree... 1298s Reading state information... 1298s Starting pkgProblemResolver with broken count: 0 1298s Starting 2 pkgProblemResolver with broken count: 0 1298s Done 1299s The following additional packages will be installed: 1299s libamd3 libarpack2t64 libblas3 libcolamd3 libgfortran5 libglpk40 libgomp1 1299s libigraph3t64 liblapack3 liblibleidenalg1 libltdl7 libplfit0 1299s libpython3.13-minimal libpython3.13-stdlib libsuitesparseconfig7 python3-all 1299s python3-ddt python3-igraph python3-iniconfig python3-leidenalg 1299s python3-packaging python3-pluggy python3-pytest python3-texttable python3.13 1299s python3.13-minimal 1299s Suggested packages: 1299s libiodbc2-dev default-libmysqlclient-dev plfit plfit-doc python3.13-venv 1299s python3.13-doc binfmt-support 1299s The following NEW packages will be installed: 1299s autopkgtest-satdep libamd3 libarpack2t64 libblas3 libcolamd3 libgfortran5 1299s libglpk40 libgomp1 libigraph3t64 liblapack3 liblibleidenalg1 libltdl7 1299s libplfit0 libpython3.13-minimal libpython3.13-stdlib libsuitesparseconfig7 1299s python3-all python3-ddt python3-igraph python3-iniconfig python3-leidenalg 1299s python3-packaging python3-pluggy python3-pytest python3-texttable python3.13 1299s python3.13-minimal 1299s 0 upgraded, 27 newly installed, 0 to remove and 0 not upgraded. 1299s Need to get 12.2 MB/12.2 MB of archives. 1299s After this operation, 42.8 MB of additional disk space will be used. 1299s Get:1 /tmp/autopkgtest.Xs15bL/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [732 B] 1299s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.0-2 [879 kB] 1299s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.0-2 [2188 kB] 1299s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-8ubuntu1 [148 kB] 1299s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libsuitesparseconfig7 amd64 1:7.8.3+dfsg-2 [13.4 kB] 1299s Get:6 http://ftpmaster.internal/ubuntu plucky/universe amd64 libamd3 amd64 1:7.8.3+dfsg-2 [31.1 kB] 1299s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-3build2 [247 kB] 1299s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-8ubuntu1 [909 kB] 1299s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-3build2 [2668 kB] 1300s Get:10 http://ftpmaster.internal/ubuntu plucky/universe amd64 libarpack2t64 amd64 3.9.1-1.1ubuntu1 [107 kB] 1300s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libcolamd3 amd64 1:7.8.3+dfsg-2 [19.5 kB] 1300s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl7 amd64 2.4.7-7build1 [40.3 kB] 1300s Get:13 http://ftpmaster.internal/ubuntu plucky/universe amd64 libglpk40 amd64 5.0-1build2 [369 kB] 1300s Get:14 http://ftpmaster.internal/ubuntu plucky/universe amd64 libplfit0 amd64 0.9.4+ds-1ubuntu4 [29.1 kB] 1300s Get:15 http://ftpmaster.internal/ubuntu plucky/universe amd64 libigraph3t64 amd64 0.10.13+ds-2 [924 kB] 1300s Get:16 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblibleidenalg1 amd64 0.11.1-2build2 [54.1 kB] 1300s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.0-2 [2107 kB] 1300s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.0-2 [719 kB] 1300s Get:19 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-all amd64 3.12.7-1 [890 B] 1300s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-ddt all 1.7.2-2 [8790 B] 1300s Get:21 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-iniconfig all 1.1.1-2 [6024 B] 1300s Get:22 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-texttable all 1.7.0-1 [11.2 kB] 1300s Get:23 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-igraph amd64 0.11.6+ds-1 [340 kB] 1300s Get:24 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-leidenalg amd64 0.10.2-2 [50.6 kB] 1300s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-packaging all 24.1-1 [41.4 kB] 1300s Get:26 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pluggy all 1.5.0-1 [21.0 kB] 1300s Get:27 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pytest all 8.3.3-1 [251 kB] 1300s Fetched 12.2 MB in 1s (11.9 MB/s) 1300s Selecting previously unselected package libpython3.13-minimal:amd64. 1300s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75549 files and directories currently installed.) 1300s Preparing to unpack .../00-libpython3.13-minimal_3.13.0-2_amd64.deb ... 1300s Unpacking libpython3.13-minimal:amd64 (3.13.0-2) ... 1300s Selecting previously unselected package python3.13-minimal. 1300s Preparing to unpack .../01-python3.13-minimal_3.13.0-2_amd64.deb ... 1300s Unpacking python3.13-minimal (3.13.0-2) ... 1300s Selecting previously unselected package libgomp1:amd64. 1300s Preparing to unpack .../02-libgomp1_14.2.0-8ubuntu1_amd64.deb ... 1300s Unpacking libgomp1:amd64 (14.2.0-8ubuntu1) ... 1300s Selecting previously unselected package libsuitesparseconfig7:amd64. 1300s Preparing to unpack .../03-libsuitesparseconfig7_1%3a7.8.3+dfsg-2_amd64.deb ... 1300s Unpacking libsuitesparseconfig7:amd64 (1:7.8.3+dfsg-2) ... 1300s Selecting previously unselected package libamd3:amd64. 1300s Preparing to unpack .../04-libamd3_1%3a7.8.3+dfsg-2_amd64.deb ... 1300s Unpacking libamd3:amd64 (1:7.8.3+dfsg-2) ... 1300s Selecting previously unselected package libblas3:amd64. 1300s Preparing to unpack .../05-libblas3_3.12.0-3build2_amd64.deb ... 1300s Unpacking libblas3:amd64 (3.12.0-3build2) ... 1300s Selecting previously unselected package libgfortran5:amd64. 1300s Preparing to unpack .../06-libgfortran5_14.2.0-8ubuntu1_amd64.deb ... 1300s Unpacking libgfortran5:amd64 (14.2.0-8ubuntu1) ... 1300s Selecting previously unselected package liblapack3:amd64. 1300s Preparing to unpack .../07-liblapack3_3.12.0-3build2_amd64.deb ... 1300s Unpacking liblapack3:amd64 (3.12.0-3build2) ... 1300s Selecting previously unselected package libarpack2t64:amd64. 1300s Preparing to unpack .../08-libarpack2t64_3.9.1-1.1ubuntu1_amd64.deb ... 1300s Unpacking libarpack2t64:amd64 (3.9.1-1.1ubuntu1) ... 1300s Selecting previously unselected package libcolamd3:amd64. 1300s Preparing to unpack .../09-libcolamd3_1%3a7.8.3+dfsg-2_amd64.deb ... 1300s Unpacking libcolamd3:amd64 (1:7.8.3+dfsg-2) ... 1300s Selecting previously unselected package libltdl7:amd64. 1300s Preparing to unpack .../10-libltdl7_2.4.7-7build1_amd64.deb ... 1300s Unpacking libltdl7:amd64 (2.4.7-7build1) ... 1300s Selecting previously unselected package libglpk40:amd64. 1300s Preparing to unpack .../11-libglpk40_5.0-1build2_amd64.deb ... 1300s Unpacking libglpk40:amd64 (5.0-1build2) ... 1300s Selecting previously unselected package libplfit0:amd64. 1300s Preparing to unpack .../12-libplfit0_0.9.4+ds-1ubuntu4_amd64.deb ... 1300s Unpacking libplfit0:amd64 (0.9.4+ds-1ubuntu4) ... 1300s Selecting previously unselected package libigraph3t64:amd64. 1300s Preparing to unpack .../13-libigraph3t64_0.10.13+ds-2_amd64.deb ... 1300s Unpacking libigraph3t64:amd64 (0.10.13+ds-2) ... 1300s Selecting previously unselected package liblibleidenalg1:amd64. 1300s Preparing to unpack .../14-liblibleidenalg1_0.11.1-2build2_amd64.deb ... 1300s Unpacking liblibleidenalg1:amd64 (0.11.1-2build2) ... 1300s Selecting previously unselected package libpython3.13-stdlib:amd64. 1300s Preparing to unpack .../15-libpython3.13-stdlib_3.13.0-2_amd64.deb ... 1300s Unpacking libpython3.13-stdlib:amd64 (3.13.0-2) ... 1300s Selecting previously unselected package python3.13. 1300s Preparing to unpack .../16-python3.13_3.13.0-2_amd64.deb ... 1300s Unpacking python3.13 (3.13.0-2) ... 1301s Selecting previously unselected package python3-all. 1301s Preparing to unpack .../17-python3-all_3.12.7-1_amd64.deb ... 1301s Unpacking python3-all 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/usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 1301s Setting up python3-packaging (24.1-1) ... 1301s Setting up libltdl7:amd64 (2.4.7-7build1) ... 1301s Setting up libgfortran5:amd64 (14.2.0-8ubuntu1) ... 1301s Setting up python3-pluggy (1.5.0-1) ... 1302s Setting up libsuitesparseconfig7:amd64 (1:7.8.3+dfsg-2) ... 1302s Setting up python3.13-minimal (3.13.0-2) ... 1302s Setting up libplfit0:amd64 (0.9.4+ds-1ubuntu4) ... 1302s Setting up libpython3.13-stdlib:amd64 (3.13.0-2) ... 1302s Setting up liblapack3:amd64 (3.12.0-3build2) ... 1302s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 1302s Setting up libarpack2t64:amd64 (3.9.1-1.1ubuntu1) ... 1302s Setting up libamd3:amd64 (1:7.8.3+dfsg-2) ... 1302s Setting up libcolamd3:amd64 (1:7.8.3+dfsg-2) ... 1302s Setting up python3.13 (3.13.0-2) ... 1303s Setting up python3-pytest (8.3.3-1) ... 1303s Setting up python3-all (3.12.7-1) ... 1303s Setting up libglpk40:amd64 (5.0-1build2) ... 1303s Setting up libigraph3t64:amd64 (0.10.13+ds-2) ... 1303s Setting up python3-igraph (0.11.6+ds-1) ... 1304s Setting up liblibleidenalg1:amd64 (0.11.1-2build2) ... 1304s Setting up python3-leidenalg (0.10.2-2) ... 1304s /usr/lib/python3/dist-packages/leidenalg/Optimiser.py:7: SyntaxWarning: invalid escape sequence '\g' 1304s """ Class for doing community detection using the Leiden algorithm. 1304s /usr/lib/python3/dist-packages/leidenalg/Optimiser.py:305: SyntaxWarning: invalid escape sequence '\s' 1304s """ Optimise the given partitions simultaneously. 1304s /usr/lib/python3/dist-packages/leidenalg/VertexPartition.py:388: SyntaxWarning: invalid escape sequence '\m' 1304s """ Implements modularity. This quality function is well-defined only for positive edge weights. 1304s /usr/lib/python3/dist-packages/leidenalg/VertexPartition.py:761: SyntaxWarning: invalid escape sequence '\m' 1304s """ Implements Reichardt and Bornholdt's Potts model with a configuration null model. 1304s /usr/lib/python3/dist-packages/leidenalg/Optimiser.py:7: SyntaxWarning: invalid escape sequence '\g' 1304s """ Class for doing community detection using the Leiden algorithm. 1304s /usr/lib/python3/dist-packages/leidenalg/Optimiser.py:305: SyntaxWarning: invalid escape sequence '\s' 1304s """ Optimise the given partitions simultaneously. 1304s /usr/lib/python3/dist-packages/leidenalg/VertexPartition.py:388: SyntaxWarning: invalid escape sequence '\m' 1304s """ Implements modularity. This quality function is well-defined only for positive edge weights. 1304s /usr/lib/python3/dist-packages/leidenalg/VertexPartition.py:761: SyntaxWarning: invalid escape sequence '\m' 1304s """ Implements Reichardt and Bornholdt's Potts model with a configuration null model. 1304s Setting up autopkgtest-satdep (0) ... 1304s Processing triggers for systemd (256.5-2ubuntu4) ... 1304s Processing triggers for man-db (2.12.1-3) ... 1304s Processing triggers for libc-bin (2.40-1ubuntu3) ... 1306s (Reading database ... 76647 files and directories currently installed.) 1306s Removing autopkgtest-satdep (0) ... 1307s autopkgtest [06:08:05]: test run-unit-test: [----------------------- 1307s ============================= test session starts ============================== 1307s platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3.13 1307s cachedir: .pytest_cache 1307s rootdir: /tmp/autopkgtest.Xs15bL/autopkgtest_tmp 1307s plugins: typeguard-4.4.1 1308s collecting ... collected 0 items / 2 errors 1308s 1308s ==================================== ERRORS ==================================== 1308s ___________________ ERROR collecting tests/test_Optimiser.py ___________________ 1308s ImportError while importing test module '/tmp/autopkgtest.Xs15bL/autopkgtest_tmp/tests/test_Optimiser.py'. 1308s Hint: make sure your test modules/packages have valid Python names. 1308s Traceback: 1308s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 1308s return _bootstrap._gcd_import(name[level:], package, level) 1308s tests/test_Optimiser.py:2: in 1308s import igraph as ig 1308s /usr/lib/python3/dist-packages/igraph/__init__.py:25: in 1308s from igraph._igraph import ( 1308s E ModuleNotFoundError: No module named 'igraph._igraph' 1308s ________________ ERROR collecting tests/test_VertexPartition.py ________________ 1308s ImportError while importing test module '/tmp/autopkgtest.Xs15bL/autopkgtest_tmp/tests/test_VertexPartition.py'. 1308s Hint: make sure your test modules/packages have valid Python names. 1308s Traceback: 1308s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 1308s return _bootstrap._gcd_import(name[level:], package, level) 1308s tests/test_VertexPartition.py:2: in 1308s import igraph as ig 1308s /usr/lib/python3/dist-packages/igraph/__init__.py:25: in 1308s from igraph._igraph import ( 1308s E ModuleNotFoundError: No module named 'igraph._igraph' 1308s =========================== short test summary info ============================ 1308s ERROR tests/test_Optimiser.py 1308s ERROR tests/test_VertexPartition.py 1308s !!!!!!!!!!!!!!!!!!! Interrupted: 2 errors during collection !!!!!!!!!!!!!!!!!!!! 1308s ============================== 2 errors in 0.09s =============================== 1308s autopkgtest [06:08:06]: test run-unit-test: -----------------------] 1308s autopkgtest [06:08:06]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 1308s run-unit-test FAIL non-zero exit status 2 1309s autopkgtest [06:08:07]: @@@@@@@@@@@@@@@@@@@@ summary 1309s run-unit-test FAIL non-zero exit status 2 1801s nova [W] Skipping flock for amd64 1801s Creating nova instance adt-plucky-amd64-python-leidenalg-20241114-054618-juju-7f2275-prod-proposed-migration-environment-20-1ecd362e-326d-4823-819e-9fe48388e21e from image adt/ubuntu-plucky-amd64-server-20241113.img (UUID 62c21ac4-2290-4c8d-8313-dddd18eacff4)... 1801s nova [E] Timed out waiting for cd116619-6865-436b-a3dd-4a333dcb761f to get deleted. 1801s nova [E] Timed out waiting for cd116619-6865-436b-a3dd-4a333dcb761f to get deleted. 1801s nova [E] Timed out waiting for cd116619-6865-436b-a3dd-4a333dcb761f to get deleted. 1801s nova [E] Timed out waiting for cd116619-6865-436b-a3dd-4a333dcb761f to get deleted. 1801s nova [E] Timed out waiting for cd116619-6865-436b-a3dd-4a333dcb761f to get deleted. 1801s nova [E] Timed out waiting for cd116619-6865-436b-a3dd-4a333dcb761f to get deleted. 1801s nova [E] Timed out waiting for cd116619-6865-436b-a3dd-4a333dcb761f to get deleted. 1801s nova [E] Timed out waiting for cd116619-6865-436b-a3dd-4a333dcb761f to get deleted. 1801s nova [E] Timed out waiting for cd116619-6865-436b-a3dd-4a333dcb761f to get deleted. 1801s nova [E] Timed out waiting for cd116619-6865-436b-a3dd-4a333dcb761f to get deleted.