0s autopkgtest [23:12:46]: starting date and time: 2024-11-15 23:12:46+0000
  0s autopkgtest [23:12:46]: git checkout: 0acbae0a WIP show VirtSubproc stderr in real-time
  0s autopkgtest [23:12:46]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.rt1nzsc6/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:scikit-learn --apt-upgrade python-hmmlearn --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=scikit-learn/1.4.2+dfsg-6build1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-1.secgroup --name adt-plucky-amd64-python-hmmlearn-20241115-231246-juju-7f2275-prod-proposed-migration-environment-2-7a879574-796e-4133-ad7b-a8768b7f5124 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
 47s autopkgtest [23:13:33]: testbed dpkg architecture: amd64
 47s autopkgtest [23:13:33]: testbed apt version: 2.9.8
 47s autopkgtest [23:13:33]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 48s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB]
 48s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [1029 kB]
 48s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B]
 48s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [93.0 kB]
 48s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.5 kB]
 48s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [176 kB]
 48s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [111 kB]
 48s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [32.6 kB]
 48s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [811 kB]
 48s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [297 kB]
 48s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [740 B]
 48s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [9416 B]
 49s Fetched 2655 kB in 1s (3206 kB/s)
 49s Reading package lists...
 51s Reading package lists...
 51s Building dependency tree...
 51s Reading state information...
 51s Calculating upgrade...
 51s The following NEW packages will be installed:
 51s   libassuan9
 51s The following packages will be upgraded:
 51s   libgpgme11t64 libseccomp2 python3-cffi-backend
 52s 3 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
 52s Need to get 348 kB of archives.
 52s After this operation, 361 kB of additional disk space will be used.
 52s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libseccomp2 amd64 2.5.5-1ubuntu5 [53.3 kB]
 52s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-cffi-backend amd64 1.17.1-2build1 [96.7 kB]
 52s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libassuan9 amd64 3.0.1-2 [42.9 kB]
 52s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libgpgme11t64 amd64 1.24.0-2ubuntu1 [155 kB]
 52s Fetched 348 kB in 0s (717 kB/s)
 52s (Reading database ... 
(Reading database ... 5%
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(Reading database ... 55%
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(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 75576 files and directories currently installed.)
 52s Preparing to unpack .../libseccomp2_2.5.5-1ubuntu5_amd64.deb ...
 52s Unpacking libseccomp2:amd64 (2.5.5-1ubuntu5) over (2.5.5-1ubuntu4) ...
 52s Setting up libseccomp2:amd64 (2.5.5-1ubuntu5) ...
 52s (Reading database ... 
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(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 75576 files and directories currently installed.)
 52s Preparing to unpack .../python3-cffi-backend_1.17.1-2build1_amd64.deb ...
 52s Unpacking python3-cffi-backend:amd64 (1.17.1-2build1) over (1.17.1-2) ...
 52s Selecting previously unselected package libassuan9:amd64.
 52s Preparing to unpack .../libassuan9_3.0.1-2_amd64.deb ...
 52s Unpacking libassuan9:amd64 (3.0.1-2) ...
 52s Preparing to unpack .../libgpgme11t64_1.24.0-2ubuntu1_amd64.deb ...
 52s Unpacking libgpgme11t64:amd64 (1.24.0-2ubuntu1) over (1.23.2-5ubuntu4) ...
 52s Setting up libassuan9:amd64 (3.0.1-2) ...
 52s Setting up libgpgme11t64:amd64 (1.24.0-2ubuntu1) ...
 52s Setting up python3-cffi-backend:amd64 (1.17.1-2build1) ...
 52s Processing triggers for libc-bin (2.40-1ubuntu3) ...
 53s Reading package lists...
 53s Building dependency tree...
 53s Reading state information...
 53s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 53s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease
 53s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
 54s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
 54s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
 54s Reading package lists...
 54s Reading package lists...
 55s Building dependency tree...
 55s Reading state information...
 55s Calculating upgrade...
 55s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 55s Reading package lists...
 55s Building dependency tree...
 55s Reading state information...
 55s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 58s autopkgtest [23:13:44]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 13:41:20 UTC 2024
 58s autopkgtest [23:13:44]: @@@@@@@@@@@@@@@@@@@@ apt-source python-hmmlearn
 60s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-hmmlearn 0.3.2-2 (dsc) [2230 B]
 60s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-hmmlearn 0.3.2-2 (tar) [75.2 kB]
 60s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-hmmlearn 0.3.2-2 (diff) [4644 B]
 60s gpgv: Signature made Mon Oct  7 08:45:37 2024 UTC
 60s gpgv:                using RSA key 724D609337113C710550D7473C26763F6C67E6E2
 60s gpgv: Can't check signature: No public key
 60s dpkg-source: warning: cannot verify inline signature for ./python-hmmlearn_0.3.2-2.dsc: no acceptable signature found
 60s autopkgtest [23:13:46]: testing package python-hmmlearn version 0.3.2-2
 60s autopkgtest [23:13:46]: build not needed
 61s autopkgtest [23:13:47]: test pybuild-autopkgtest: preparing testbed
 62s Reading package lists...
 62s Building dependency tree...
 62s Reading state information...
 62s Starting pkgProblemResolver with broken count: 0
 62s Starting 2 pkgProblemResolver with broken count: 0
 62s Done
 62s The following additional packages will be installed:
 62s   autoconf automake autopoint autotools-dev build-essential cpp cpp-14
 62s   cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu debhelper debugedit
 62s   dh-autoreconf dh-python dh-strip-nondeterminism dwz g++ g++-14
 62s   g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14
 62s   gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gettext intltool-debian
 62s   libarchive-zip-perl libasan8 libblas3 libcc1-0 libdebhelper-perl
 62s   libexpat1-dev libfile-stripnondeterminism-perl libgcc-14-dev libgfortran5
 62s   libgomp1 libhwasan0 libisl23 libitm1 libjs-jquery libjs-sphinxdoc
 62s   libjs-underscore liblapack3 liblbfgsb0 liblsan0 libmpc3 libpython3-all-dev
 62s   libpython3-dev libpython3.12-dev libquadmath0 libstdc++-14-dev libtool
 62s   libtsan2 libubsan1 m4 po-debconf pybind11-dev pybuild-plugin-autopkgtest
 62s   pybuild-plugin-pyproject python3-all python3-all-dev python3-build
 62s   python3-decorator python3-dev python3-hmmlearn python3-iniconfig
 62s   python3-installer python3-joblib python3-numpy python3-packaging
 62s   python3-pluggy python3-pybind11 python3-pyproject-hooks python3-pytest
 62s   python3-scipy python3-setuptools-scm python3-sklearn python3-sklearn-lib
 62s   python3-threadpoolctl python3-toml python3-wheel python3.12-dev zlib1g-dev
 62s Suggested packages:
 62s   autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-14-locales
 62s   cpp-14-doc dh-make flit g++-multilib g++-14-multilib gcc-14-doc gcc-multilib
 62s   manpages-dev flex bison gdb gcc-doc gcc-14-multilib gdb-x86-64-linux-gnu
 62s   gettext-doc libasprintf-dev libgettextpo-dev libstdc++-14-doc libtool-doc
 62s   gfortran | fortran95-compiler gcj-jdk m4-doc libmail-box-perl pybind11-doc
 62s   python3-pip python3-venv python-build-doc python-installer-doc
 62s   python-joblib-doc gfortran python-numpy-doc python-scipy-doc python3-dap
 62s   python-sklearn-doc ipython3
 62s Recommended packages:
 62s   libarchive-cpio-perl javascript-common libltdl-dev libmail-sendmail-perl
 62s   libeigen3-dev python3-simplejson python3-psutil python3-pil
 62s   python3-matplotlib
 63s The following NEW packages will be installed:
 63s   autoconf automake autopkgtest-satdep autopoint autotools-dev build-essential
 63s   cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu debhelper debugedit
 63s   dh-autoreconf dh-python dh-strip-nondeterminism dwz g++ g++-14
 63s   g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14
 63s   gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gettext intltool-debian
 63s   libarchive-zip-perl libasan8 libblas3 libcc1-0 libdebhelper-perl
 63s   libexpat1-dev libfile-stripnondeterminism-perl libgcc-14-dev libgfortran5
 63s   libgomp1 libhwasan0 libisl23 libitm1 libjs-jquery libjs-sphinxdoc
 63s   libjs-underscore liblapack3 liblbfgsb0 liblsan0 libmpc3 libpython3-all-dev
 63s   libpython3-dev libpython3.12-dev libquadmath0 libstdc++-14-dev libtool
 63s   libtsan2 libubsan1 m4 po-debconf pybind11-dev pybuild-plugin-autopkgtest
 63s   pybuild-plugin-pyproject python3-all python3-all-dev python3-build
 63s   python3-decorator python3-dev python3-hmmlearn python3-iniconfig
 63s   python3-installer python3-joblib python3-numpy python3-packaging
 63s   python3-pluggy python3-pybind11 python3-pyproject-hooks python3-pytest
 63s   python3-scipy python3-setuptools-scm python3-sklearn python3-sklearn-lib
 63s   python3-threadpoolctl python3-toml python3-wheel python3.12-dev zlib1g-dev
 63s 0 upgraded, 83 newly installed, 0 to remove and 0 not upgraded.
 63s Need to get 115 MB/115 MB of archives.
 63s After this operation, 445 MB of additional disk space will be used.
 63s Get:1 /tmp/autopkgtest.c2mcLe/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [828 B]
 63s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 m4 amd64 1.4.19-4build1 [244 kB]
 63s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 autoconf all 2.72-3 [382 kB]
 63s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 autotools-dev all 20220109.1 [44.9 kB]
 63s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 automake all 1:1.16.5-1.3ubuntu1 [558 kB]
 63s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 autopoint all 0.22.5-2 [616 kB]
 63s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB]
 63s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB]
 63s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-8ubuntu1 [11.9 MB]
 64s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-8ubuntu1 [1030 B]
 64s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [5452 B]
 64s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.1.0-2ubuntu1 [22.4 kB]
 64s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 14.2.0-8ubuntu1 [47.6 kB]
 64s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-8ubuntu1 [148 kB]
 64s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 14.2.0-8ubuntu1 [29.1 kB]
 64s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 14.2.0-8ubuntu1 [2998 kB]
 64s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 14.2.0-8ubuntu1 [1317 kB]
 64s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 14.2.0-8ubuntu1 [2732 kB]
 64s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 14.2.0-8ubuntu1 [1177 kB]
 64s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 14.2.0-8ubuntu1 [1634 kB]
 64s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 14.2.0-8ubuntu1 [153 kB]
 64s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-8ubuntu1 [2814 kB]
 64s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-8ubuntu1 [23.3 MB]
 65s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-8ubuntu1 [528 kB]
 65s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1214 B]
 65s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.1.0-2ubuntu1 [5000 B]
 65s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-8ubuntu1 [2504 kB]
 65s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-8ubuntu1 [13.3 MB]
 65s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-8ubuntu1 [19.9 kB]
 65s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [966 B]
 65s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.1.0-2ubuntu1 [1100 B]
 65s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B]
 65s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebhelper-perl all 13.20ubuntu1 [94.2 kB]
 65s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libtool all 2.4.7-7build1 [166 kB]
 65s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 dh-autoreconf all 20 [16.1 kB]
 65s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libarchive-zip-perl all 1.68-1 [90.2 kB]
 65s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [20.1 kB]
 65s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 dh-strip-nondeterminism all 1.14.0-1 [5058 B]
 65s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 debugedit amd64 1:5.1-1 [46.9 kB]
 65s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 dwz amd64 0.15-1build6 [115 kB]
 65s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 gettext amd64 0.22.5-2 [948 kB]
 65s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 intltool-debian all 0.35.0+20060710.6 [23.2 kB]
 65s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 po-debconf all 1.0.21+nmu1 [233 kB]
 65s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 debhelper all 13.20ubuntu1 [893 kB]
 65s Get:45 http://ftpmaster.internal/ubuntu plucky/universe amd64 dh-python all 6.20241024 [112 kB]
 65s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-3build2 [247 kB]
 65s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libexpat1-dev amd64 2.6.4-1 [148 kB]
 65s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-8ubuntu1 [909 kB]
 65s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
 65s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB]
 65s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-sphinxdoc all 7.4.7-4 [158 kB]
 65s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-3build2 [2668 kB]
 65s Get:53 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblbfgsb0 amd64 3.0+dfsg.4-1build1 [29.9 kB]
 65s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB]
 66s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.12-dev amd64 3.12.7-3 [5699 kB]
 66s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3-dev amd64 3.12.6-0ubuntu1 [10.2 kB]
 66s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3-all-dev amd64 3.12.6-0ubuntu1 [916 B]
 66s Get:58 http://ftpmaster.internal/ubuntu plucky/universe amd64 pybind11-dev all 2.13.6-1 [168 kB]
 66s Get:59 http://ftpmaster.internal/ubuntu plucky/universe amd64 pybuild-plugin-autopkgtest all 6.20241024 [1746 B]
 66s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-packaging all 24.1-1 [41.4 kB]
 66s Get:61 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyproject-hooks all 1.2.0-1 [10.2 kB]
 66s Get:62 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-toml all 0.10.2-1 [16.5 kB]
 66s Get:63 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-wheel all 0.44.0-1 [54.2 kB]
 66s Get:64 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-build all 1.2.2-1 [31.0 kB]
 66s Get:65 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-installer all 0.7.0+dfsg1-3 [17.4 kB]
 66s Get:66 http://ftpmaster.internal/ubuntu plucky/universe amd64 pybuild-plugin-pyproject all 6.20241024 [1728 B]
 66s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-all amd64 3.12.6-0ubuntu1 [886 B]
 66s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12-dev amd64 3.12.7-3 [505 kB]
 66s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dev amd64 3.12.6-0ubuntu1 [26.7 kB]
 66s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-all-dev amd64 3.12.6-0ubuntu1 [908 B]
 66s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-decorator all 5.1.1-5 [10.1 kB]
 66s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-numpy amd64 1:1.26.4+ds-11build1 [4479 kB]
 66s Get:73 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-scipy amd64 1.13.1-5 [18.2 MB]
 66s Get:74 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-joblib all 1.3.2-5 [206 kB]
 66s Get:75 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-threadpoolctl all 3.1.0-1 [21.3 kB]
 66s Get:76 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 python3-sklearn-lib amd64 1.4.2+dfsg-6build1 [6868 kB]
 67s Get:77 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 python3-sklearn all 1.4.2+dfsg-6build1 [2257 kB]
 67s Get:78 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-hmmlearn amd64 0.3.2-2 [127 kB]
 67s Get:79 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-iniconfig all 1.1.1-2 [6024 B]
 67s Get:80 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pluggy all 1.5.0-1 [21.0 kB]
 67s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pybind11 all 2.13.6-1 [176 kB]
 67s Get:82 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pytest all 8.3.3-1 [251 kB]
 67s Get:83 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-setuptools-scm all 8.1.0-1 [32.2 kB]
 67s Fetched 115 MB in 4s (27.6 MB/s)
 67s Selecting previously unselected package m4.
 67s (Reading database ... 
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 79s Setting up python3-pybind11 (2.13.6-1) ...
 79s Setting up python3-all-dev (3.12.6-0ubuntu1) ...
 79s Setting up gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ...
 79s Setting up python3-hmmlearn (0.3.2-2) ...
 79s Setting up gcc-14 (14.2.0-8ubuntu1) ...
 79s Setting up g++-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ...
 79s Setting up g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ...
 79s Setting up g++-14 (14.2.0-8ubuntu1) ...
 79s Setting up libtool (2.4.7-7build1) ...
 79s Setting up gcc (4:14.1.0-2ubuntu1) ...
 79s Setting up dh-autoreconf (20) ...
 79s Setting up g++ (4:14.1.0-2ubuntu1) ...
 79s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
 79s Setting up build-essential (12.10ubuntu1) ...
 79s Setting up debhelper (13.20ubuntu1) ...
 79s Setting up pybuild-plugin-autopkgtest (6.20241024) ...
 79s Setting up autopkgtest-satdep (0) ...
 79s Processing triggers for man-db (2.13.0-1) ...
 80s Processing triggers for install-info (7.1.1-1) ...
 80s Processing triggers for libc-bin (2.40-1ubuntu3) ...
 84s (Reading database ... 82321 files and directories currently installed.)
 84s Removing autopkgtest-satdep (0) ...
 84s autopkgtest [23:14:10]: test pybuild-autopkgtest: pybuild-autopkgtest
 84s autopkgtest [23:14:10]: test pybuild-autopkgtest: [-----------------------
 85s pybuild-autopkgtest
 85s I: pybuild base:311: cd /tmp/autopkgtest.c2mcLe/autopkgtest_tmp/build; python3.12 -m pytest --pyargs hmmlearn
 86s ============================= test session starts ==============================
 86s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0
 86s rootdir: /tmp/autopkgtest.c2mcLe/autopkgtest_tmp/build
 86s plugins: typeguard-4.4.1
 86s set RNG seed to 982487155
 86s collected 320 items
 86s 
 86s tests/test_base.py ................                                      [  5%]
 86s tests/test_categorical_hmm.py ......................                     [ 11%]
 88s tests/test_gaussian_hmm.py ............................................. [ 25%]
 92s .....................................................                    [ 42%]
 93s tests/test_gmm_hmm.py xxxxxXxxxxxXxxxxxX                                 [ 48%]
 96s tests/test_gmm_hmm_multisequence.py ........                             [ 50%]
104s tests/test_gmm_hmm_new.py ..............XX................XX............ [ 65%]
111s ....XX................xx........                                         [ 75%]
111s tests/test_kl_divergence.py .....                                        [ 76%]
111s tests/test_multinomial_hmm.py ................                           [ 81%]
112s tests/test_poisson_hmm.py ............                                   [ 85%]
112s tests/test_utils.py ...                                                  [ 86%]
113s tests/test_variational_categorical.py ............                       [ 90%]
127s tests/test_variational_gaussian.py ................................      [100%]
127s 
127s =============================== warnings summary ===============================
127s tests/test_gaussian_hmm.py: 1 warning
127s tests/test_gmm_hmm_multisequence.py: 5 warnings
127s tests/test_gmm_hmm_new.py: 13 warnings
127s tests/test_poisson_hmm.py: 1 warning
127s tests/test_variational_gaussian.py: 27 warnings
127s   /usr/lib/python3/dist-packages/hmmlearn/base.py:509: RuntimeWarning: underflow encountered in multiply
127s     posteriors = fwdlattice * bwdlattice
127s 
127s tests/test_gaussian_hmm.py: 1 warning
127s tests/test_variational_gaussian.py: 30 warnings
127s   /usr/lib/python3/dist-packages/hmmlearn/_emissions.py:153: RuntimeWarning: underflow encountered in matmul
127s     stats['obs'] += posteriors.T @ X
127s 
127s tests/test_gaussian_hmm.py: 1 warning
127s tests/test_variational_gaussian.py: 12 warnings
127s   /usr/lib/python3/dist-packages/hmmlearn/_emissions.py:157: RuntimeWarning: underflow encountered in matmul
127s     stats['obs**2'] += posteriors.T @ X**2
127s 
127s tests/test_gmm_hmm_multisequence.py: 4 warnings
127s tests/test_gmm_hmm_new.py: 13 warnings
127s tests/test_poisson_hmm.py: 1 warning
127s tests/test_variational_gaussian.py: 27 warnings
127s   /usr/lib/python3/dist-packages/hmmlearn/utils.py:29: RuntimeWarning: underflow encountered in divide
127s     a /= a_sum
127s 
127s tests/test_gmm_hmm_new.py::TestGMMHMMWithSphericalCovars::test_fit_zero_variance[scaling]
127s   /usr/lib/python3/dist-packages/hmmlearn/base.py:598: RuntimeWarning: overflow encountered in exp
127s     return np.exp(self._compute_log_likelihood(X))
127s 
127s tests/test_gmm_hmm_new.py::TestGMMHMMWithSphericalCovars::test_fit_zero_variance[scaling]
127s tests/test_gmm_hmm_new.py::TestGMMHMMWithSphericalCovars::test_fit_zero_variance[log]
127s   /usr/lib/python3/dist-packages/hmmlearn/utils.py:55: RuntimeWarning: invalid value encountered in subtract
127s     a -= a_lse
127s 
127s tests/test_gmm_hmm_new.py::TestGMMHMMWithDiagCovars::test_fit_zero_variance[scaling]
127s tests/test_gmm_hmm_new.py::TestGMMHMMWithDiagCovars::test_fit_zero_variance[log]
127s tests/test_gmm_hmm_new.py::TestGMMHMMWithFullCovars::test_fit_zero_variance[scaling]
127s tests/test_gmm_hmm_new.py::TestGMMHMMWithFullCovars::test_fit_zero_variance[log]
127s   /usr/lib/python3/dist-packages/hmmlearn/hmm.py:809: RuntimeWarning: invalid value encountered in divide
127s     self.covars_ = c_n / c_d
127s 
127s tests/test_gmm_hmm_new.py::TestGMMHMMWithDiagCovars::test_fit_zero_variance[scaling]
127s tests/test_gmm_hmm_new.py::TestGMMHMMWithDiagCovars::test_fit_zero_variance[log]
127s tests/test_gmm_hmm_new.py::TestGMMHMMWithFullCovars::test_fit_zero_variance[scaling]
127s tests/test_gmm_hmm_new.py::TestGMMHMMWithFullCovars::test_fit_zero_variance[log]
127s   /usr/lib/python3/dist-packages/hmmlearn/_emissions.py:208: RuntimeWarning: divide by zero encountered in log
127s     log_cur_weights = np.log(self.weights_[i_comp])
127s 
127s tests/test_gmm_hmm_new.py::TestGMMHMMWithDiagCovars::test_fit_zero_variance[log]
127s   /usr/lib/python3/dist-packages/hmmlearn/hmm.py:744: RuntimeWarning: invalid value encountered in divide
127s     self.weights_ = w_n / w_d
127s 
127s tests/test_gmm_hmm_new.py::TestGMMHMMWithDiagCovars::test_fit_zero_variance[log]
127s   /usr/lib/python3/dist-packages/hmmlearn/hmm.py:756: RuntimeWarning: invalid value encountered in divide
127s     self.means_ = m_n / m_d[:, :, None]
127s 
127s tests/test_variational_categorical.py: 10 warnings
127s tests/test_variational_gaussian.py: 20 warnings
127s   /usr/lib/python3/dist-packages/hmmlearn/base.py:1215: RuntimeWarning: underflow encountered in exp
127s     self.startprob_subnorm_ = np.exp(startprob_log_subnorm)
127s 
127s tests/test_variational_categorical.py: 8 warnings
127s tests/test_variational_gaussian.py: 12 warnings
127s   /usr/lib/python3/dist-packages/hmmlearn/base.py:1220: RuntimeWarning: underflow encountered in exp
127s     self.transmat_subnorm_ = np.exp(transmat_log_subnorm)
127s 
127s tests/test_variational_categorical.py: 1 warning
127s tests/test_variational_gaussian.py: 31 warnings
127s   /usr/lib/python3/dist-packages/hmmlearn/base.py:1153: RuntimeWarning: underflow encountered in exp
127s     return np.exp(self._compute_subnorm_log_likelihood(X))
127s 
127s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
127s ========== 294 passed, 17 xfailed, 9 xpassed, 231 warnings in 41.53s ===========
127s autopkgtest [23:14:53]: test pybuild-autopkgtest: -----------------------]
128s pybuild-autopkgtest  PASS
128s autopkgtest [23:14:54]: test pybuild-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
128s autopkgtest [23:14:54]: @@@@@@@@@@@@@@@@@@@@ summary
128s pybuild-autopkgtest  PASS
140s virt: nova [W] Skipping flock for amd64
140s virt: Creating nova instance adt-plucky-amd64-python-hmmlearn-20241115-231246-juju-7f2275-prod-proposed-migration-environment-2-7a879574-796e-4133-ad7b-a8768b7f5124 from image adt/ubuntu-plucky-amd64-server-20241115.img (UUID 9bb4dd9c-454f-45da-a125-77b9d27ed145)...