0s autopkgtest [12:15:15]: starting date and time: 2025-02-19 12:15:15+0000 0s autopkgtest [12:15:15]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [12:15:15]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.n6g8c93i/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:sphinx --apt-upgrade python-fabio --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=sphinx/8.1.3-5 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@lcy02-71.secgroup --name adt-plucky-amd64-python-fabio-20250219-121515-juju-7f2275-prod-proposed-migration-environment-2-6ec898c6-f36a-453b-8fd8-3540b2b4252a --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 44s autopkgtest [12:15:59]: testbed dpkg architecture: amd64 44s autopkgtest [12:15:59]: testbed apt version: 2.9.29 45s autopkgtest [12:16:00]: @@@@@@@@@@@@@@@@@@@@ test bed setup 45s autopkgtest [12:16:00]: testbed release detected to be: None 45s autopkgtest [12:16:00]: updating testbed package index (apt update) 45s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [110 kB] 45s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 45s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 45s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 45s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [3120 B] 45s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [750 kB] 46s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.1 kB] 46s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [13.9 kB] 46s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [81.8 kB] 46s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [101 kB] 46s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted i386 Packages [2412 B] 46s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [7984 B] 46s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [697 kB] 46s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [265 kB] 46s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [3128 B] 46s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [11.5 kB] 46s Fetched 2124 kB in 0s (5366 kB/s) 47s Reading package lists... 47s Reading package lists... 47s Building dependency tree... 47s Reading state information... 48s Calculating upgrade... 48s The following NEW packages will be installed: 48s libapt-pkg7.0 48s The following packages will be upgraded: 48s apt apt-utils iproute2 liblsof0 libp11-kit0 lsof rsyslog 48s 7 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 48s Need to get 5234 kB of archives. 48s After this operation, 4074 kB of additional disk space will be used. 48s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libapt-pkg7.0 amd64 2.9.30 [1131 kB] 48s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 apt amd64 2.9.30 [1434 kB] 48s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 apt-utils amd64 2.9.30 [222 kB] 48s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 iproute2 amd64 6.13.0-1ubuntu1 [1277 kB] 48s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libp11-kit0 amd64 0.25.5-2ubuntu3 [311 kB] 48s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 rsyslog amd64 8.2412.0-2ubuntu1 [555 kB] 48s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 lsof amd64 4.99.4+dfsg-1 [245 kB] 48s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsof0 amd64 4.99.4+dfsg-1 [59.6 kB] 49s Preconfiguring packages ... 49s Fetched 5234 kB in 0s (27.1 MB/s) 49s Selecting previously unselected package libapt-pkg7.0:amd64. 49s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108925 files and directories currently installed.) 49s Preparing to unpack .../libapt-pkg7.0_2.9.30_amd64.deb ... 49s Unpacking libapt-pkg7.0:amd64 (2.9.30) ... 49s Setting up libapt-pkg7.0:amd64 (2.9.30) ... 49s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108974 files and directories currently installed.) 49s Preparing to unpack .../archives/apt_2.9.30_amd64.deb ... 49s Unpacking apt (2.9.30) over (2.9.29) ... 49s Setting up apt (2.9.30) ... 50s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108974 files and directories currently installed.) 50s Preparing to unpack .../0-apt-utils_2.9.30_amd64.deb ... 50s Unpacking apt-utils (2.9.30) over (2.9.29) ... 50s Preparing to unpack .../1-iproute2_6.13.0-1ubuntu1_amd64.deb ... 50s Unpacking iproute2 (6.13.0-1ubuntu1) over (6.10.0-2ubuntu1) ... 50s Preparing to unpack .../2-libp11-kit0_0.25.5-2ubuntu3_amd64.deb ... 50s Unpacking libp11-kit0:amd64 (0.25.5-2ubuntu3) over (0.25.5-2ubuntu2) ... 50s Preparing to unpack .../3-rsyslog_8.2412.0-2ubuntu1_amd64.deb ... 50s Unpacking rsyslog (8.2412.0-2ubuntu1) over (8.2412.0-1ubuntu1) ... 51s Preparing to unpack .../4-lsof_4.99.4+dfsg-1_amd64.deb ... 51s Unpacking lsof (4.99.4+dfsg-1) over (4.99.3+dfsg-2) ... 51s Preparing to unpack .../5-liblsof0_4.99.4+dfsg-1_amd64.deb ... 51s Unpacking liblsof0 (4.99.4+dfsg-1) over (4.99.3+dfsg-2) ... 51s Setting up apt-utils (2.9.30) ... 51s Setting up liblsof0 (4.99.4+dfsg-1) ... 51s Setting up iproute2 (6.13.0-1ubuntu1) ... 51s Setting up rsyslog (8.2412.0-2ubuntu1) ... 51s info: The user `syslog' is already a member of `adm'. 52s Setting up libp11-kit0:amd64 (0.25.5-2ubuntu3) ... 52s Setting up lsof (4.99.4+dfsg-1) ... 52s Processing triggers for man-db (2.13.0-1) ... 53s Processing triggers for libc-bin (2.40-4ubuntu1) ... 55s Reading package lists... 55s Building dependency tree... 55s Reading state information... 55s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 55s autopkgtest [12:16:10]: upgrading testbed (apt dist-upgrade and autopurge) 55s Reading package lists... 56s Building dependency tree... 56s Reading state information... 56s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 56s Starting 2 pkgProblemResolver with broken count: 0 56s Done 56s Entering ResolveByKeep 57s 57s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 57s Reading package lists... 57s Building dependency tree... 57s Reading state information... 57s Starting pkgProblemResolver with broken count: 0 57s Starting 2 pkgProblemResolver with broken count: 0 58s Done 58s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 58s autopkgtest [12:16:13]: rebooting testbed after setup commands that affected boot 62s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 73s autopkgtest [12:16:28]: testbed running kernel: Linux 6.12.0-15-generic #15-Ubuntu SMP PREEMPT_DYNAMIC Tue Feb 4 16:02:16 UTC 2025 74s autopkgtest [12:16:29]: @@@@@@@@@@@@@@@@@@@@ apt-source python-fabio 76s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-fabio 2024.4.0-2build1 (dsc) [2877 B] 76s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-fabio 2024.4.0-2build1 (tar) [726 kB] 76s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-fabio 2024.4.0-2build1 (diff) [9172 B] 76s gpgv: Signature made Fri Nov 15 13:41:33 2024 UTC 76s gpgv: using RSA key 568BF22A66337CBFC9A6B9B72C83DBC8E9BD0E37 76s gpgv: Can't check signature: No public key 76s dpkg-source: warning: cannot verify inline signature for ./python-fabio_2024.4.0-2build1.dsc: no acceptable signature found 76s autopkgtest [12:16:31]: testing package python-fabio version 2024.4.0-2build1 77s autopkgtest [12:16:32]: build not needed 77s autopkgtest [12:16:32]: test command1: preparing testbed 77s Reading package lists... 77s Building dependency tree... 77s Reading state information... 78s Starting pkgProblemResolver with broken count: 0 78s Starting 2 pkgProblemResolver with broken count: 0 78s Done 79s The following NEW packages will be installed: 79s blt fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 79s fonts-lyx libaec0 libavahi-client3 libavahi-common-data libavahi-common3 79s libblas3 libcups2t64 libdeflate0 libdouble-conversion3 libdrm-intel1 79s libdrm-radeon1 libegl-mesa0 libegl1 libfontconfig1 libgbm1 libgfortran5 79s libgl1 libgl1-mesa-dri libglapi-mesa libglvnd0 libglx-mesa0 libglx0 libgomp1 79s libgraphite2-3 libharfbuzz0b libhdf5-310 libhdf5-hl-310 libice6 79s libimagequant0 libinput-bin libinput10 libjbig0 libjpeg-turbo8 libjpeg8 79s libjs-jquery libjs-jquery-ui liblapack3 liblbfgsb0 liblcms2-2 liblerc4 79s liblzf1 libmd4c0 libmtdev1t64 libopenjp2-7 libpciaccess0 libpcre2-16-0 79s libqhull-r8.0 libqt5core5t64 libqt5dbus5t64 libqt5designer5 libqt5gui5t64 79s libqt5help5 libqt5network5t64 libqt5printsupport5t64 libqt5sql5t64 79s libqt5test5t64 libqt5widgets5t64 libqt5xml5t64 libraqm0 libsharpyuv0 libsm6 79s libsz2 libtcl8.6 libtiff6 libtk8.6 libvulkan1 libwacom-common libwacom9 79s libwayland-client0 libwayland-server0 libwebp7 libwebpdemux2 libwebpmux3 79s libx11-xcb1 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 79s libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0 79s libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 79s libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxft2 79s libxkbcommon-x11-0 libxrender1 libxshmfence1 libxslt1.1 libxss1 libxxf86vm1 79s mesa-libgallium python-matplotlib-data python3-all python3-brotli 79s python3-contourpy python3-cycler python3-dateutil python3-decorator 79s python3-fabio python3-fonttools python3-fs python3-h5py python3-h5py-serial 79s python3-kiwisolver python3-lxml python3-lz4 python3-matplotlib 79s python3-mpmath python3-numpy python3-packaging python3-pil 79s python3-pil.imagetk python3-platformdirs python3-pyqt5 python3-pyqt5.sip 79s python3-pytz python3-scipy python3-sympy python3-tk python3-tz 79s python3-ufolib2 python3.12 python3.12-minimal python3.12-tk python3.13-tk 79s tk8.6-blt2.5 unicode-data x11-common 79s 0 upgraded, 141 newly installed, 0 to remove and 0 not upgraded. 79s Need to get 104 MB of archives. 79s After this operation, 467 MB of additional disk space will be used. 79s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12-minimal amd64 3.12.9-1 [2348 kB] 79s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12 amd64 3.12.9-1 [671 kB] 79s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB] 79s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 79s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 79s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-2ubuntu1 [37.4 kB] 79s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-2ubuntu1 [164 kB] 79s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 79s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 79s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 79s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 79s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB] 79s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7build1 [630 kB] 79s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 blt amd64 2.5.3+dfsg-7build1 [4840 B] 79s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-2ubuntu1 [180 kB] 79s Get:16 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-lyx all 2.4.3-1 [171 kB] 79s Get:17 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 79s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 libavahi-common-data amd64 0.8-14ubuntu1 [30.5 kB] 79s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libavahi-common3 amd64 0.8-14ubuntu1 [23.3 kB] 79s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libavahi-client3 amd64 0.8-14ubuntu1 [27.5 kB] 79s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 79s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libcups2t64 amd64 2.4.11-0ubuntu2 [292 kB] 79s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB] 79s Get:24 http://ftpmaster.internal/ubuntu plucky/universe amd64 libdouble-conversion3 amd64 3.3.0-1build1 [40.3 kB] 79s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libpciaccess0 amd64 0.17-3build1 [18.6 kB] 79s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libdrm-intel1 amd64 2.4.123-1 [68.8 kB] 79s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libdrm-radeon1 amd64 2.4.123-1 [25.3 kB] 79s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libwayland-server0 amd64 1.23.1-1 [36.6 kB] 79s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libglapi-mesa amd64 24.3.4-3ubuntu1 [42.9 kB] 79s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libx11-xcb1 amd64 2:1.8.10-2 [7944 B] 79s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-dri3-0 amd64 1.17.0-2 [7508 B] 79s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-present0 amd64 1.17.0-2 [6064 B] 79s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-randr0 amd64 1.17.0-2 [17.9 kB] 79s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-sync1 amd64 1.17.0-2 [9312 B] 79s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-xfixes0 amd64 1.17.0-2 [10.2 kB] 79s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libxshmfence1 amd64 1.3-1build5 [4764 B] 79s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 mesa-libgallium amd64 24.3.4-3ubuntu1 [11.9 MB] 79s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libgbm1 amd64 24.3.4-3ubuntu1 [33.3 kB] 79s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libwayland-client0 amd64 1.23.1-1 [29.1 kB] 79s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 79s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libegl-mesa0 amd64 24.3.4-3ubuntu1 [136 kB] 79s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 15-20250213-1ubuntu1 [920 kB] 79s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libvulkan1 amd64 1.4.304.0-1 [147 kB] 79s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libgl1-mesa-dri amd64 24.3.4-3ubuntu1 [34.7 kB] 79s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-glx0 amd64 1.17.0-2 [24.8 kB] 79s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libxxf86vm1 amd64 1:1.1.4-1build4 [9282 B] 79s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libglx-mesa0 amd64 24.3.4-3ubuntu1 [146 kB] 79s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 15-20250213-1ubuntu1 [148 kB] 79s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 79s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB] 79s Get:51 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 79s Get:52 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-310 amd64 1.14.5+repack-3 [1519 kB] 79s Get:53 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-310 amd64 1.14.5+repack-3 [62.6 kB] 79s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 79s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libimagequant0 amd64 2.18.0-1build1 [36.3 kB] 79s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libwacom-common all 2.14.0-1 [103 kB] 79s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libwacom9 amd64 2.14.0-1 [27.3 kB] 79s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libinput-bin amd64 1.27.1-1 [23.4 kB] 79s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libmtdev1t64 amd64 1.1.7-1 [16.3 kB] 79s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libinput10 amd64 1.27.1-1 [155 kB] 79s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 79s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 79s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 79s Get:64 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 79s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 79s Get:66 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblbfgsb0 amd64 3.0+dfsg.4-1build1 [29.9 kB] 79s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 liblcms2-2 amd64 2.16-2 [212 kB] 79s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 79s Get:69 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblzf1 amd64 3.6-4 [7624 B] 79s Get:70 http://ftpmaster.internal/ubuntu plucky/universe amd64 libmd4c0 amd64 0.5.2-2 [50.1 kB] 79s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.42-4ubuntu3 [214 kB] 79s Get:72 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqhull-r8.0 amd64 2020.2-6build1 [193 kB] 79s Get:73 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5core5t64 amd64 5.15.15+dfsg-4ubuntu1 [2038 kB] 79s Get:74 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5dbus5t64 amd64 5.15.15+dfsg-4ubuntu1 [221 kB] 79s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libglvnd0 amd64 1.7.0-1build1 [69.6 kB] 79s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libegl1 amd64 1.7.0-1build1 [28.7 kB] 79s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libglx0 amd64 1.7.0-1build1 [38.6 kB] 79s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libgl1 amd64 1.7.0-1build1 [102 kB] 79s Get:79 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5network5t64 amd64 5.15.15+dfsg-4ubuntu1 [725 kB] 80s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 80s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-icccm4 amd64 0.4.2-1 [11.1 kB] 80s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-util1 amd64 0.4.1-1 [11.2 kB] 80s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-image0 amd64 0.4.0-2build1 [10.8 kB] 80s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-keysyms1 amd64 0.4.1-1 [8738 B] 80s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 80s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render-util0 amd64 0.3.10-1 [10.8 kB] 80s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shape0 amd64 1.17.0-2 [6092 B] 80s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-xinerama0 amd64 1.17.0-2 [5412 B] 80s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-xinput0 amd64 1.17.0-2 [33.2 kB] 80s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-xkb1 amd64 1.17.0-2 [32.3 kB] 80s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 libxkbcommon-x11-0 amd64 1.7.0-2 [15.2 kB] 80s Get:92 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5gui5t64 amd64 5.15.15+dfsg-4ubuntu1 [3791 kB] 80s Get:93 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5widgets5t64 amd64 5.15.15+dfsg-4ubuntu1 [2560 kB] 80s Get:94 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5xml5t64 amd64 5.15.15+dfsg-4ubuntu1 [124 kB] 80s Get:95 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5designer5 amd64 5.15.15-6 [2827 kB] 80s Get:96 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5sql5t64 amd64 5.15.15+dfsg-4ubuntu1 [122 kB] 80s Get:97 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5help5 amd64 5.15.15-6 [162 kB] 80s Get:98 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5printsupport5t64 amd64 5.15.15+dfsg-4ubuntu1 [208 kB] 80s Get:99 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5test5t64 amd64 5.15.15+dfsg-4ubuntu1 [149 kB] 80s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libraqm0 amd64 0.10.2-1 [17.2 kB] 80s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 80s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 80s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 80s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 80s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebpdemux2 amd64 1.5.0-0.1 [13.0 kB] 80s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebpmux3 amd64 1.5.0-0.1 [27.6 kB] 80s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libxslt1.1 amd64 1.1.39-0exp1ubuntu2 [175 kB] 80s Get:108 http://ftpmaster.internal/ubuntu plucky/universe amd64 python-matplotlib-data all 3.8.3-3ubuntu2 [2929 kB] 80s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-all amd64 3.13.1-1~exp2 [894 B] 80s Get:110 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-brotli amd64 1.1.0-2build3 [368 kB] 80s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-numpy amd64 1:1.26.4+ds-13 [5319 kB] 80s Get:112 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-contourpy amd64 1.3.1-1 [271 kB] 80s Get:113 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-cycler all 0.12.1-1 [9716 B] 80s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dateutil all 2.9.0-3 [80.2 kB] 80s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-decorator all 5.1.1-5 [10.1 kB] 80s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-pytz all 2025.1-3 [162 kB] 80s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-tz all 2025.1-3 [1866 B] 80s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-platformdirs all 4.3.6-1 [16.8 kB] 80s Get:119 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-fs all 2.4.16-6 [90.7 kB] 80s Get:120 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lxml amd64 5.3.1-1 [1831 kB] 80s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-lz4 amd64 4.4.0+dfsg-1 [27.4 kB] 80s Get:122 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-scipy amd64 1.14.1-4ubuntu1 [22.3 MB] 80s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-mpmath all 1.3.0-1 [425 kB] 80s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-sympy all 1.13.3-1 [4228 kB] 80s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-ufolib2 all 0.17.0+dfsg1-1 [33.5 kB] 80s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 unicode-data all 15.1.0-1 [8878 kB] 80s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-fonttools amd64 4.55.3-2 [1755 kB] 80s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-h5py-serial amd64 3.12.1-1 [1677 kB] 81s Get:129 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-h5py all 3.12.1-1 [7970 B] 81s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-kiwisolver amd64 1.4.7-3 [70.4 kB] 81s Get:131 http://ftpmaster.internal/ubuntu plucky/main amd64 libopenjp2-7 amd64 2.5.0-2ubuntu3 [217 kB] 81s Get:132 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-pil amd64 11.1.0-5 [589 kB] 81s Get:133 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12-tk amd64 3.12.9-1 [116 kB] 81s Get:134 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-tk amd64 3.13.2-1 [107 kB] 81s Get:135 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-tk amd64 3.13.1-1 [9770 B] 81s Get:136 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pil.imagetk amd64 11.1.0-5 [9936 B] 81s Get:137 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-packaging all 24.2-1 [51.5 kB] 81s Get:138 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-matplotlib amd64 3.8.3-3ubuntu2 [4697 kB] 81s Get:139 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyqt5.sip amd64 12.17.0-1 [78.3 kB] 81s Get:140 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyqt5 amd64 5.15.11+dfsg-1build2 [2725 kB] 81s Get:141 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-fabio amd64 2024.4.0-2build1 [925 kB] 81s Fetched 104 MB in 2s (51.1 MB/s) 81s Selecting previously unselected package python3.12-minimal. 81s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108975 files and directories currently installed.) 81s Preparing to unpack .../000-python3.12-minimal_3.12.9-1_amd64.deb ... 81s Unpacking python3.12-minimal (3.12.9-1) ... 81s Selecting previously unselected package python3.12. 81s Preparing to unpack .../001-python3.12_3.12.9-1_amd64.deb ... 81s Unpacking python3.12 (3.12.9-1) ... 81s Selecting previously unselected package libtcl8.6:amd64. 81s Preparing to unpack .../002-libtcl8.6_8.6.16+dfsg-1_amd64.deb ... 81s Unpacking libtcl8.6:amd64 (8.6.16+dfsg-1) ... 82s Selecting previously unselected package fonts-dejavu-mono. 82s Preparing to unpack .../003-fonts-dejavu-mono_2.37-8_all.deb ... 82s Unpacking fonts-dejavu-mono (2.37-8) ... 82s Selecting previously unselected package fonts-dejavu-core. 82s Preparing to unpack .../004-fonts-dejavu-core_2.37-8_all.deb ... 82s Unpacking fonts-dejavu-core (2.37-8) ... 82s Selecting previously unselected package fontconfig-config. 82s Preparing to unpack .../005-fontconfig-config_2.15.0-2ubuntu1_amd64.deb ... 82s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 82s Selecting previously unselected package libfontconfig1:amd64. 82s Preparing to unpack .../006-libfontconfig1_2.15.0-2ubuntu1_amd64.deb ... 82s Unpacking libfontconfig1:amd64 (2.15.0-2ubuntu1) ... 82s Selecting previously unselected package libxrender1:amd64. 82s Preparing to unpack .../007-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 82s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 82s Selecting previously unselected package libxft2:amd64. 82s Preparing to unpack .../008-libxft2_2.3.6-1build1_amd64.deb ... 82s Unpacking libxft2:amd64 (2.3.6-1build1) ... 82s Selecting previously unselected package x11-common. 82s Preparing to unpack .../009-x11-common_1%3a7.7+23ubuntu3_all.deb ... 82s Unpacking x11-common (1:7.7+23ubuntu3) ... 82s Selecting previously unselected package libxss1:amd64. 82s Preparing to unpack .../010-libxss1_1%3a1.2.3-1build3_amd64.deb ... 82s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 82s Selecting previously unselected package libtk8.6:amd64. 82s Preparing to unpack .../011-libtk8.6_8.6.16-1_amd64.deb ... 82s Unpacking libtk8.6:amd64 (8.6.16-1) ... 82s Selecting previously unselected package tk8.6-blt2.5. 82s Preparing to unpack .../012-tk8.6-blt2.5_2.5.3+dfsg-7build1_amd64.deb ... 82s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 82s Selecting previously unselected package blt. 82s Preparing to unpack .../013-blt_2.5.3+dfsg-7build1_amd64.deb ... 82s Unpacking blt (2.5.3+dfsg-7build1) ... 82s Selecting previously unselected package fontconfig. 82s Preparing to unpack .../014-fontconfig_2.15.0-2ubuntu1_amd64.deb ... 82s Unpacking fontconfig (2.15.0-2ubuntu1) ... 82s Selecting previously unselected package fonts-lyx. 82s Preparing to unpack .../015-fonts-lyx_2.4.3-1_all.deb ... 82s Unpacking fonts-lyx (2.4.3-1) ... 82s Selecting previously unselected package libaec0:amd64. 82s Preparing to unpack .../016-libaec0_1.1.3-1_amd64.deb ... 82s Unpacking libaec0:amd64 (1.1.3-1) ... 82s Selecting previously unselected package libavahi-common-data:amd64. 82s Preparing to unpack .../017-libavahi-common-data_0.8-14ubuntu1_amd64.deb ... 82s Unpacking libavahi-common-data:amd64 (0.8-14ubuntu1) ... 82s Selecting previously unselected package libavahi-common3:amd64. 82s Preparing to unpack .../018-libavahi-common3_0.8-14ubuntu1_amd64.deb ... 82s Unpacking libavahi-common3:amd64 (0.8-14ubuntu1) ... 82s Selecting previously unselected package libavahi-client3:amd64. 82s Preparing to unpack .../019-libavahi-client3_0.8-14ubuntu1_amd64.deb ... 82s Unpacking libavahi-client3:amd64 (0.8-14ubuntu1) ... 82s Selecting previously unselected package libblas3:amd64. 82s Preparing to unpack .../020-libblas3_3.12.1-2_amd64.deb ... 82s Unpacking libblas3:amd64 (3.12.1-2) ... 82s Selecting previously unselected package libcups2t64:amd64. 82s Preparing to unpack .../021-libcups2t64_2.4.11-0ubuntu2_amd64.deb ... 82s Unpacking libcups2t64:amd64 (2.4.11-0ubuntu2) ... 82s Selecting previously unselected package libdeflate0:amd64. 82s Preparing to unpack .../022-libdeflate0_1.23-1_amd64.deb ... 82s Unpacking libdeflate0:amd64 (1.23-1) ... 82s Selecting previously unselected package libdouble-conversion3:amd64. 82s Preparing to unpack .../023-libdouble-conversion3_3.3.0-1build1_amd64.deb ... 82s Unpacking libdouble-conversion3:amd64 (3.3.0-1build1) ... 83s Selecting previously unselected package libpciaccess0:amd64. 83s Preparing to unpack .../024-libpciaccess0_0.17-3build1_amd64.deb ... 83s Unpacking libpciaccess0:amd64 (0.17-3build1) ... 83s Selecting previously unselected package libdrm-intel1:amd64. 83s Preparing to unpack .../025-libdrm-intel1_2.4.123-1_amd64.deb ... 83s Unpacking libdrm-intel1:amd64 (2.4.123-1) ... 83s Selecting previously unselected package libdrm-radeon1:amd64. 83s Preparing to unpack .../026-libdrm-radeon1_2.4.123-1_amd64.deb ... 83s Unpacking libdrm-radeon1:amd64 (2.4.123-1) ... 83s Selecting previously unselected package libwayland-server0:amd64. 83s Preparing to unpack .../027-libwayland-server0_1.23.1-1_amd64.deb ... 83s Unpacking libwayland-server0:amd64 (1.23.1-1) ... 83s Selecting previously unselected package libglapi-mesa:amd64. 83s Preparing to unpack .../028-libglapi-mesa_24.3.4-3ubuntu1_amd64.deb ... 83s Unpacking libglapi-mesa:amd64 (24.3.4-3ubuntu1) ... 83s Selecting previously unselected package libx11-xcb1:amd64. 83s Preparing to unpack .../029-libx11-xcb1_2%3a1.8.10-2_amd64.deb ... 83s Unpacking libx11-xcb1:amd64 (2:1.8.10-2) ... 83s Selecting previously unselected package libxcb-dri3-0:amd64. 83s Preparing to unpack .../030-libxcb-dri3-0_1.17.0-2_amd64.deb ... 83s Unpacking libxcb-dri3-0:amd64 (1.17.0-2) ... 83s Selecting previously unselected package libxcb-present0:amd64. 83s Preparing to unpack .../031-libxcb-present0_1.17.0-2_amd64.deb ... 83s Unpacking libxcb-present0:amd64 (1.17.0-2) ... 83s Selecting previously unselected package libxcb-randr0:amd64. 83s Preparing to unpack .../032-libxcb-randr0_1.17.0-2_amd64.deb ... 83s Unpacking libxcb-randr0:amd64 (1.17.0-2) ... 83s Selecting previously unselected package libxcb-sync1:amd64. 83s Preparing to unpack .../033-libxcb-sync1_1.17.0-2_amd64.deb ... 83s Unpacking libxcb-sync1:amd64 (1.17.0-2) ... 83s Selecting previously unselected package libxcb-xfixes0:amd64. 83s Preparing to unpack .../034-libxcb-xfixes0_1.17.0-2_amd64.deb ... 83s Unpacking libxcb-xfixes0:amd64 (1.17.0-2) ... 83s Selecting previously unselected package libxshmfence1:amd64. 83s Preparing to unpack .../035-libxshmfence1_1.3-1build5_amd64.deb ... 83s Unpacking libxshmfence1:amd64 (1.3-1build5) ... 83s Selecting previously unselected package mesa-libgallium:amd64. 83s Preparing to unpack .../036-mesa-libgallium_24.3.4-3ubuntu1_amd64.deb ... 83s Unpacking mesa-libgallium:amd64 (24.3.4-3ubuntu1) ... 83s Selecting previously unselected package libgbm1:amd64. 83s Preparing to unpack .../037-libgbm1_24.3.4-3ubuntu1_amd64.deb ... 83s Unpacking libgbm1:amd64 (24.3.4-3ubuntu1) ... 83s Selecting previously unselected package libwayland-client0:amd64. 83s Preparing to unpack .../038-libwayland-client0_1.23.1-1_amd64.deb ... 83s Unpacking libwayland-client0:amd64 (1.23.1-1) ... 83s Selecting previously unselected package libxcb-shm0:amd64. 83s Preparing to unpack .../039-libxcb-shm0_1.17.0-2_amd64.deb ... 83s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 83s Selecting previously unselected package libegl-mesa0:amd64. 83s Preparing to unpack .../040-libegl-mesa0_24.3.4-3ubuntu1_amd64.deb ... 83s Unpacking libegl-mesa0:amd64 (24.3.4-3ubuntu1) ... 83s Selecting previously unselected package libgfortran5:amd64. 83s Preparing to unpack .../041-libgfortran5_15-20250213-1ubuntu1_amd64.deb ... 83s Unpacking libgfortran5:amd64 (15-20250213-1ubuntu1) ... 83s Selecting previously unselected package libvulkan1:amd64. 83s Preparing to unpack .../042-libvulkan1_1.4.304.0-1_amd64.deb ... 83s Unpacking libvulkan1:amd64 (1.4.304.0-1) ... 83s Selecting previously unselected package libgl1-mesa-dri:amd64. 83s Preparing to unpack .../043-libgl1-mesa-dri_24.3.4-3ubuntu1_amd64.deb ... 83s Unpacking libgl1-mesa-dri:amd64 (24.3.4-3ubuntu1) ... 83s Selecting previously unselected package libxcb-glx0:amd64. 83s Preparing to unpack .../044-libxcb-glx0_1.17.0-2_amd64.deb ... 83s Unpacking libxcb-glx0:amd64 (1.17.0-2) ... 83s Selecting previously unselected package libxxf86vm1:amd64. 83s Preparing to unpack .../045-libxxf86vm1_1%3a1.1.4-1build4_amd64.deb ... 83s Unpacking libxxf86vm1:amd64 (1:1.1.4-1build4) ... 83s Selecting previously unselected package libglx-mesa0:amd64. 83s Preparing to unpack .../046-libglx-mesa0_24.3.4-3ubuntu1_amd64.deb ... 83s Unpacking libglx-mesa0:amd64 (24.3.4-3ubuntu1) ... 83s Selecting previously unselected package libgomp1:amd64. 83s Preparing to unpack .../047-libgomp1_15-20250213-1ubuntu1_amd64.deb ... 83s Unpacking libgomp1:amd64 (15-20250213-1ubuntu1) ... 83s Selecting previously unselected package libgraphite2-3:amd64. 83s Preparing to unpack .../048-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 83s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 83s Selecting previously unselected package libharfbuzz0b:amd64. 83s Preparing to unpack .../049-libharfbuzz0b_10.2.0-1_amd64.deb ... 83s Unpacking libharfbuzz0b:amd64 (10.2.0-1) ... 84s Selecting previously unselected package libsz2:amd64. 84s Preparing to unpack .../050-libsz2_1.1.3-1_amd64.deb ... 84s Unpacking libsz2:amd64 (1.1.3-1) ... 84s Selecting previously unselected package libhdf5-310:amd64. 84s Preparing to unpack .../051-libhdf5-310_1.14.5+repack-3_amd64.deb ... 84s Unpacking libhdf5-310:amd64 (1.14.5+repack-3) ... 84s Selecting previously unselected package libhdf5-hl-310:amd64. 84s Preparing to unpack .../052-libhdf5-hl-310_1.14.5+repack-3_amd64.deb ... 84s Unpacking libhdf5-hl-310:amd64 (1.14.5+repack-3) ... 84s Selecting previously unselected package libice6:amd64. 84s Preparing to unpack .../053-libice6_2%3a1.1.1-1_amd64.deb ... 84s Unpacking libice6:amd64 (2:1.1.1-1) ... 84s Selecting previously unselected package libimagequant0:amd64. 84s Preparing to unpack .../054-libimagequant0_2.18.0-1build1_amd64.deb ... 84s Unpacking libimagequant0:amd64 (2.18.0-1build1) ... 84s Selecting previously unselected package libwacom-common. 84s Preparing to unpack .../055-libwacom-common_2.14.0-1_all.deb ... 84s Unpacking libwacom-common (2.14.0-1) ... 84s Selecting previously unselected package libwacom9:amd64. 84s Preparing to unpack .../056-libwacom9_2.14.0-1_amd64.deb ... 84s Unpacking libwacom9:amd64 (2.14.0-1) ... 84s Selecting previously unselected package libinput-bin. 84s Preparing to unpack .../057-libinput-bin_1.27.1-1_amd64.deb ... 84s Unpacking libinput-bin (1.27.1-1) ... 84s Selecting previously unselected package libmtdev1t64:amd64. 84s Preparing to unpack .../058-libmtdev1t64_1.1.7-1_amd64.deb ... 84s Unpacking libmtdev1t64:amd64 (1.1.7-1) ... 84s Selecting previously unselected package libinput10:amd64. 84s Preparing to unpack .../059-libinput10_1.27.1-1_amd64.deb ... 84s Unpacking libinput10:amd64 (1.27.1-1) ... 84s Selecting previously unselected package libjpeg-turbo8:amd64. 84s Preparing to unpack .../060-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ... 84s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 84s Selecting previously unselected package libjpeg8:amd64. 84s Preparing to unpack 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previously unselected package libxcb-keysyms1:amd64. 85s Preparing to unpack .../083-libxcb-keysyms1_0.4.1-1_amd64.deb ... 85s Unpacking libxcb-keysyms1:amd64 (0.4.1-1) ... 85s Selecting previously unselected package libxcb-render0:amd64. 85s Preparing to unpack .../084-libxcb-render0_1.17.0-2_amd64.deb ... 85s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 85s Selecting previously unselected package libxcb-render-util0:amd64. 85s Preparing to unpack .../085-libxcb-render-util0_0.3.10-1_amd64.deb ... 85s Unpacking libxcb-render-util0:amd64 (0.3.10-1) ... 85s Selecting previously unselected package libxcb-shape0:amd64. 85s Preparing to unpack .../086-libxcb-shape0_1.17.0-2_amd64.deb ... 85s Unpacking libxcb-shape0:amd64 (1.17.0-2) ... 85s Selecting previously unselected package libxcb-xinerama0:amd64. 85s Preparing to unpack .../087-libxcb-xinerama0_1.17.0-2_amd64.deb ... 85s Unpacking libxcb-xinerama0:amd64 (1.17.0-2) ... 85s Selecting previously unselected package libxcb-xinput0:amd64. 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libxcb-shape0:amd64 (1.17.0-2) ... 91s Setting up x11-common (1:7.7+23ubuntu3) ... 91s Setting up libdeflate0:amd64 (1.23-1) ... 91s Setting up libqhull-r8.0:amd64 (2020.2-6build1) ... 91s Setting up libxcb-render-util0:amd64 (0.3.10-1) ... 91s Setting up python3-all (3.13.1-1~exp2) ... 91s Setting up python3-pytz (2025.1-3) ... 92s Setting up libxcb-shm0:amd64 (1.17.0-2) ... 92s Setting up libxcb-icccm4:amd64 (0.4.2-1) ... 92s Setting up libgomp1:amd64 (15-20250213-1ubuntu1) ... 92s Setting up libjbig0:amd64 (2.1-6.1ubuntu2) ... 92s Setting up libpcre2-16-0:amd64 (10.42-4ubuntu3) ... 92s Setting up libaec0:amd64 (1.1.3-1) ... 92s Setting up python3-platformdirs (4.3.6-1) ... 92s Setting up python3-tz (2025.1-3) ... 92s Setting up libxcb-util1:amd64 (0.4.1-1) ... 92s Setting up libxxf86vm1:amd64 (1:1.1.4-1build4) ... 92s Setting up libxcb-xkb1:amd64 (1.17.0-2) ... 92s Setting up libxcb-image0:amd64 (0.4.0-2build1) ... 92s Setting up python3-fs (2.4.16-6) ... 92s Setting up libxcb-present0:amd64 (1.17.0-2) ... 92s Setting up unicode-data (15.1.0-1) ... 92s Setting up libqt5core5t64:amd64 (5.15.15+dfsg-4ubuntu1) ... 92s Setting up python3-decorator (5.1.1-5) ... 92s Setting up libblas3:amd64 (3.12.1-2) ... 92s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 92s Setting up python3-packaging (24.2-1) ... 92s Setting up libxcb-xinerama0:amd64 (1.17.0-2) ... 92s Setting up libxcb-sync1:amd64 (1.17.0-2) ... 92s Setting up python3-brotli (1.1.0-2build3) ... 93s Setting up libavahi-common-data:amd64 (0.8-14ubuntu1) ... 93s Setting up liblzf1:amd64 (3.6-4) ... 93s Setting up python3-cycler (0.12.1-1) ... 93s Setting up libimagequant0:amd64 (2.18.0-1build1) ... 93s Setting up libxkbcommon-x11-0:amd64 (1.7.0-2) ... 93s Setting up fonts-dejavu-mono (2.37-8) ... 93s Setting up python3-kiwisolver (1.4.7-3) ... 93s Setting up libtcl8.6:amd64 (8.6.16+dfsg-1) ... 93s Setting up fonts-dejavu-core (2.37-8) ... 93s Setting up libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 93s Setting up libglapi-mesa:amd64 (24.3.4-3ubuntu1) ... 93s Setting up libgfortran5:amd64 (15-20250213-1ubuntu1) ... 93s Setting up libvulkan1:amd64 (1.4.304.0-1) ... 93s Setting up libwebp7:amd64 (1.5.0-0.1) ... 93s Setting up python3-pyqt5.sip (12.17.0-1) ... 93s Setting up libmtdev1t64:amd64 (1.1.7-1) ... 93s Setting up libxshmfence1:amd64 (1.3-1build5) ... 93s Setting up libxcb-randr0:amd64 (1.17.0-2) ... 93s Setting up libxslt1.1:amd64 (1.1.39-0exp1ubuntu2) ... 93s Setting up libqt5sql5t64:amd64 (5.15.15+dfsg-4ubuntu1) ... 93s Setting up libmd4c0:amd64 (0.5.2-2) ... 93s Setting up libopenjp2-7:amd64 (2.5.0-2ubuntu3) ... 93s Setting up libharfbuzz0b:amd64 (10.2.0-1) ... 93s Setting up python3-dateutil (2.9.0-3) ... 93s Setting up libxss1:amd64 (1:1.2.3-1build3) ... 93s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 93s Setting up python3-mpmath (1.3.0-1) ... 94s Setting up python-matplotlib-data (3.8.3-3ubuntu2) ... 94s Setting up libwebpmux3:amd64 (1.5.0-0.1) ... 94s Setting up libsz2:amd64 (1.1.3-1) ... 94s Setting up libwacom-common (2.14.0-1) ... 94s Setting up libwayland-client0:amd64 (1.23.1-1) ... 94s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 94s Setting up python3-sympy (1.13.3-1) ... 105s Setting up libice6:amd64 (2:1.1.1-1) ... 105s Setting up mesa-libgallium:amd64 (24.3.4-3ubuntu1) ... 105s Setting up liblapack3:amd64 (3.12.1-2) ... 105s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 105s Setting up libqt5dbus5t64:amd64 (5.15.15+dfsg-4ubuntu1) ... 105s Setting up libgbm1:amd64 (24.3.4-3ubuntu1) ... 105s Setting up libwacom9:amd64 (2.14.0-1) ... 105s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 105s Setting up libwebpdemux2:amd64 (1.5.0-0.1) ... 105s Setting up libgl1-mesa-dri:amd64 (24.3.4-3ubuntu1) ... 105s Setting up libqt5network5t64:amd64 (5.15.15+dfsg-4ubuntu1) ... 105s Setting up libavahi-common3:amd64 (0.8-14ubuntu1) ... 105s Setting up libqt5xml5t64:amd64 (5.15.15+dfsg-4ubuntu1) ... 105s Setting up libqt5test5t64:amd64 (5.15.15+dfsg-4ubuntu1) ... 105s Setting up libinput-bin (1.27.1-1) ... 105s Setting up libegl-mesa0:amd64 (24.3.4-3ubuntu1) ... 105s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 105s Setting up libraqm0:amd64 (0.10.2-1) ... 105s Setting up python3-numpy (1:1.26.4+ds-13) ... 108s Setting up libhdf5-310:amd64 (1.14.5+repack-3) ... 108s Setting up python3-lxml:amd64 (5.3.1-1) ... 108s Setting up libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 108s Setting up libegl1:amd64 (1.7.0-1build1) ... 108s Setting up python3-contourpy (1.3.1-1) ... 109s Setting up libfontconfig1:amd64 (2.15.0-2ubuntu1) ... 109s Setting up libsm6:amd64 (2:1.2.4-1) ... 109s Setting up libavahi-client3:amd64 (0.8-14ubuntu1) ... 109s Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1build1) ... 109s Setting up libinput10:amd64 (1.27.1-1) ... 109s Setting up libhdf5-hl-310:amd64 (1.14.5+repack-3) ... 109s Setting up fontconfig (2.15.0-2ubuntu1) ... 111s Regenerating fonts cache... done. 111s Setting up libxft2:amd64 (2.3.6-1build1) ... 111s Setting up libglx-mesa0:amd64 (24.3.4-3ubuntu1) ... 111s Setting up python3-scipy (1.14.1-4ubuntu1) ... 117s Setting up libglx0:amd64 (1.7.0-1build1) ... 117s Setting up libtk8.6:amd64 (8.6.16-1) ... 117s Setting up python3.12-tk (3.12.9-1) ... 117s Setting up python3-h5py-serial (3.12.1-1) ... 117s Setting up python3.13-tk (3.13.2-1) ... 117s Setting up python3-pil:amd64 (11.1.0-5) ... 118s Setting up libgl1:amd64 (1.7.0-1build1) ... 118s Setting up python3-h5py (3.12.1-1) ... 118s Setting up libcups2t64:amd64 (2.4.11-0ubuntu2) ... 118s Setting up tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 118s Setting up blt (2.5.3+dfsg-7build1) ... 118s Setting up python3-tk:amd64 (3.13.1-1) ... 118s Setting up libqt5gui5t64:amd64 (5.15.15+dfsg-4ubuntu1) ... 118s Setting up python3-pil.imagetk:amd64 (11.1.0-5) ... 118s Setting up libqt5widgets5t64:amd64 (5.15.15+dfsg-4ubuntu1) ... 118s Setting up libqt5help5:amd64 (5.15.15-6) ... 118s Setting up libqt5printsupport5t64:amd64 (5.15.15+dfsg-4ubuntu1) ... 118s Setting up libqt5designer5:amd64 (5.15.15-6) ... 118s Setting up python3-pyqt5 (5.15.11+dfsg-1build2) ... 118s Setting up python3-ufolib2 (0.17.0+dfsg1-1) ... 119s Setting up python3-fonttools (4.55.3-2) ... 120s Setting up python3-matplotlib (3.8.3-3ubuntu2) ... 123s Setting up python3-fabio (2024.4.0-2build1) ... 123s Processing triggers for udev (257.2-3ubuntu1) ... 124s Processing triggers for libc-bin (2.40-4ubuntu1) ... 124s Processing triggers for systemd (257.2-3ubuntu1) ... 124s Processing triggers for man-db (2.13.0-1) ... 125s autopkgtest [12:17:20]: test command1: set -efu ; cp bootstrap.py pyproject.toml run_tests.py README.rst "$AUTOPKGTEST_TMP" ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py run_tests.py -v -m --installed ; done 125s autopkgtest [12:17:20]: test command1: [----------------------- 126s Testing with python3.12: 126s WARNING:run_tests:Test fabio 2024.4.0 from /usr/lib/python3/dist-packages/fabio 126s test_iter_abort_iteration (fabio.test.test_fabio_image.TestFabioImage.test_iter_abort_iteration) ... ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestFabioImage.test_iter_abort_iteration 126s testcopy (fabio.test.test_fabio_image.Test50000.testcopy) 126s test the copy statement ... ok 126s INFO:memProf:Time: 0.006s RAM: 6.144 Mb fabio.test.test_fabio_image.Test50000.testcopy 126s testgetmax (fabio.test.test_fabio_image.Test50000.testgetmax) 126s check max ... ok 126s INFO:memProf:Time: 0.003s RAM: 0.908 Mb fabio.test.test_fabio_image.Test50000.testgetmax 126s testgetmean (fabio.test.test_fabio_image.Test50000.testgetmean) 126s check mean ... ok 126s INFO:memProf:Time: 0.004s RAM: 0.252 Mb fabio.test.test_fabio_image.Test50000.testgetmean 126s testgetmin (fabio.test.test_fabio_image.Test50000.testgetmin) 126s check min ... ok 126s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.test_fabio_image.Test50000.testgetmin 126s testgetstddev (fabio.test.test_fabio_image.Test50000.testgetstddev) 126s check stddev ... ok 126s INFO:memProf:Time: 0.007s RAM: 8.272 Mb fabio.test.test_fabio_image.Test50000.testgetstddev 126s testRebin (fabio.test.test_fabio_image.TestSlices.testRebin) 126s Test the rebin method ... ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testRebin 126s testgetmax (fabio.test.test_fabio_image.TestSlices.testgetmax) 126s check max ... ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testgetmax 126s testgetmin (fabio.test.test_fabio_image.TestSlices.testgetmin) 126s check min ... ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testgetmin 126s testintegratearea (fabio.test.test_fabio_image.TestSlices.testintegratearea) 126s check integrations ... ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testintegratearea 126s testFlat (fabio.test.test_fabio_image.TestOpen.testFlat) 126s no compression ... ok 126s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.testFlat 126s test_badtype (fabio.test.test_fabio_image.TestOpen.test_badtype) ... ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.test_badtype 126s test_pathlib (fabio.test.test_fabio_image.TestOpen.test_pathlib) ... ok 126s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.test_pathlib 126s testbz2 (fabio.test.test_fabio_image.TestOpen.testbz2) 126s bzipped ... ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.testbz2 126s testgz (fabio.test.test_fabio_image.TestOpen.testgz) 126s gzipped ... ok 126s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.testgz 126s testpil (fabio.test.test_fabio_image.TestPilImage.testpil) ... WARNING:fabio.DEPRECATION:Function toPIL16 is deprecated since fabio version 0.9. Reason: Not maintained. Use 'fabio.utils.pilutils.create_pil_16' instead. 126s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 209, in testpil 126s pim = img.toPIL16() 126s ok 126s INFO:memProf:Time: 0.038s RAM: 0.000 Mb fabio.test.test_fabio_image.TestPilImage.testpil 126s testpil (fabio.test.test_fabio_image.TestPilImage2.testpil) ... WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py:232: RuntimeWarning: invalid value encountered in cast 126s return (numpy.random.random(shape) * sys.maxsize / 10).astype(typ) 126s 126s ok 126s INFO:memProf:Time: 0.038s RAM: 0.000 Mb fabio.test.test_fabio_image.TestPilImage2.testpil 126s testpil (fabio.test.test_fabio_image.TestPilImage3.testpil) ... WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py:240: RuntimeWarning: invalid value encountered in cast 126s return ((numpy.random.random(shape) - 0.5) * sys.maxsize / 10).astype(typ) 126s 126s ok 126s INFO:memProf:Time: 0.038s RAM: 0.000 Mb fabio.test.test_fabio_image.TestPilImage3.testpil 126s test_cleanup_pilimage_cache (fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_cleanup_pilimage_cache) ... WARNING:fabio.DEPRECATION:Function pilimage is deprecated. Reason: Setting pilimage not supported. This attrbute is not cached anymore. 126s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 257, in test_cleanup_pilimage_cache 126s image.pilimage = None 126s ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_cleanup_pilimage_cache 126s test_patch_dim (fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_patch_dim) ... WARNING:fabio.DEPRECATION:Function dim2 is deprecated. Reason: dim2 should not be updated. 126s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 249, in test_patch_dim 126s image.dim2, image.dim1 = data.shape 126s WARNING:fabio.DEPRECATION:Function dim1 is deprecated. Reason: dim1 should not be updated. 126s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 249, in test_patch_dim 126s image.dim2, image.dim1 = data.shape 126s ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_patch_dim 126s test_many_cases (fabio.test.test_filenames.TestFilenames.test_many_cases) 126s loop over CASES ... ok 126s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenames.test_many_cases 126s test_more_cases (fabio.test.test_filenames.TestFilenames.test_more_cases) ... ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenames.test_more_cases 126s test_more_cases_jump (fabio.test.test_filenames.TestFilenames.test_more_cases_jump) ... ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenames.test_more_cases_jump 126s test_FileNameObject_can_iterate (fabio.test.test_filenames.TestFilenameObjects.test_FileNameObject_can_iterate) 126s Regression test for Fable ... ok 126s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenameObjects.test_FileNameObject_can_iterate 126s test_files_are_being_opened (fabio.test.test_filenames.TestFilenameObjects.test_files_are_being_opened) 126s Regression test for Fable ... ok 126s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenameObjects.test_files_are_being_opened 126s testfirst (fabio.test.test_file_series.TestRandomSeries.testfirst) 126s check first ... ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestRandomSeries.testfirst 126s testjump (fabio.test.test_file_series.TestRandomSeries.testjump) 126s check jump ... ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestRandomSeries.testjump 126s testlast (fabio.test.test_file_series.TestRandomSeries.testlast) 126s check first ... ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestRandomSeries.testlast 126s testfirst (fabio.test.test_file_series.TestEdfNumbered.testfirst) 126s first in series ... ok 126s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testfirst 126s testlast (fabio.test.test_file_series.TestEdfNumbered.testlast) 126s last in series ... ok 126s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testlast 126s testlen (fabio.test.test_file_series.TestEdfNumbered.testlen) 126s check len ... ok 126s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testlen 126s testnext (fabio.test.test_file_series.TestEdfNumbered.testnext) 126s check all in order ... ok 126s INFO:memProf:Time: 0.015s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testnext 126s testnextjump (fabio.test.test_file_series.TestEdfNumbered.testnextjump) 126s check current ... ok 126s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testnextjump 126s testprevious (fabio.test.test_file_series.TestEdfNumbered.testprevious) 126s check all in order ... ok 126s INFO:memProf:Time: 0.014s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testprevious 126s testprevjump (fabio.test.test_file_series.TestEdfNumbered.testprevjump) 126s check current ... ok 126s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testprevjump 126s test_anyframe_frames (fabio.test.test_file_series.TestFileSeries.test_anyframe_frames) ... ok 126s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_frames 126s test_anyframe_getframe (fabio.test.test_file_series.TestFileSeries.test_anyframe_getframe) ... ok 126s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_getframe 126s test_anyframe_getframes (fabio.test.test_file_series.TestFileSeries.test_anyframe_getframes) ... ok 126s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_getframes 126s test_anyframe_nframes (fabio.test.test_file_series.TestFileSeries.test_anyframe_nframes) ... ok 126s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_nframes 126s test_anyframe_nofiles (fabio.test.test_file_series.TestFileSeries.test_anyframe_nofiles) ... ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_nofiles 126s test_filename_generator (fabio.test.test_file_series.TestFileSeries.test_filename_generator) ... ok 126s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_filename_generator 126s test_filename_iterator (fabio.test.test_file_series.TestFileSeries.test_filename_iterator) ... ok 126s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_filename_iterator 126s test_multiframe_frames (fabio.test.test_file_series.TestFileSeries.test_multiframe_frames) ... ok 126s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_frames 126s test_multiframe_getframe (fabio.test.test_file_series.TestFileSeries.test_multiframe_getframe) ... ok 126s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_getframe 126s test_multiframe_nframes (fabio.test.test_file_series.TestFileSeries.test_multiframe_nframes) ... ok 126s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_nframes 126s test_multiframe_nofiles (fabio.test.test_file_series.TestFileSeries.test_multiframe_nofiles) ... ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_nofiles 126s test_singleframe_frames (fabio.test.test_file_series.TestFileSeries.test_singleframe_frames) ... ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_frames 126s test_singleframe_getframe (fabio.test.test_file_series.TestFileSeries.test_singleframe_getframe) ... ok 126s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_getframe 126s test_singleframe_nframes (fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes) ... ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes 126s test_singleframe_nframes2 (fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes2) ... ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes2 126s test_singleframe_nframes3 (fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes3) ... ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes3 126s test_singleframe_nofiles (fabio.test.test_file_series.TestFileSeries.test_singleframe_nofiles) ... ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nofiles 126s test_with_filename_series (fabio.test.test_file_series.TestFileSeries.test_with_filename_series) ... ok 126s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_with_filename_series 126s test_with_numbered_file_series (fabio.test.test_file_series.TestFileSeries.test_with_numbered_file_series) ... ok 126s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_with_numbered_file_series 126s test_next1 (fabio.test.test_filename_steps.TestNext.test_next1) ... ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filename_steps.TestNext.test_next1 126s test_prev1 (fabio.test.test_filename_steps.TestPrev.test_prev1) ... ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filename_steps.TestPrev.test_prev1 126s test_jump1 (fabio.test.test_filename_steps.TestJump.test_jump1) ... ok 126s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filename_steps.TestJump.test_jump1 126s testheader (fabio.test.test_header_not_singleton.TestHeaderNotSingleton.testheader) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 126s INFO:fabio.utils.ExternalResources:Image mb_LP_1_001.img.bz2 successfully downloaded. 130s ok 130s INFO:memProf:Time: 3.630s RAM: 45.876 Mb fabio.test.test_header_not_singleton.TestHeaderNotSingleton.testheader 130s testcase (fabio.test.test_open_header.Test1.testcase) 130s check openheader can read edf headers ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675_header_only.edf.bz2') 130s INFO:fabio.utils.ExternalResources:Image F2K_Seb_Lyso0675_header_only.edf.bz2 successfully downloaded. 130s ok 130s INFO:memProf:Time: 0.067s RAM: 0.000 Mb fabio.test.test_open_header.Test1.testcase 130s testAdsc (fabio.test.test_open_image.TestOpenDtrek.testAdsc) 130s openimage opening adsc ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 130s ok 130s INFO:memProf:Time: 0.081s RAM: 147.672 Mb fabio.test.test_open_image.TestOpenDtrek.testAdsc 130s testAdscBz2 (fabio.test.test_open_image.TestOpenDtrek.testAdscBz2) 130s openimage opening adsc bzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 131s ok 131s INFO:memProf:Time: 1.613s RAM: 23.592 Mb fabio.test.test_open_image.TestOpenDtrek.testAdscBz2 131s testAdscGz (fabio.test.test_open_image.TestOpenDtrek.testAdscGz) 131s openimage opening adsc gzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.gz') 132s ok 132s INFO:memProf:Time: 0.235s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenDtrek.testAdscGz 132s testBruker (fabio.test.test_open_image.TestOpenBruker.testBruker) 132s openimage opening bruker ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 132s INFO:fabio.utils.ExternalResources:Image Cr8F8140k103.0026.bz2 successfully downloaded. 132s ok 132s INFO:memProf:Time: 0.102s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenBruker.testBruker 132s testBrukerBz2 (fabio.test.test_open_image.TestOpenBruker.testBrukerBz2) 132s openimage opening bruker bzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 132s ok 132s INFO:memProf:Time: 0.059s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenBruker.testBrukerBz2 132s testBrukerGz (fabio.test.test_open_image.TestOpenBruker.testBrukerGz) 132s openimage opening bruker gzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.gz') 132s ok 132s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenBruker.testBrukerGz 132s testEdf (fabio.test.test_open_image.TestOpenEdf.testEdf) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 132s INFO:fabio.utils.ExternalResources:Image F2K_Seb_Lyso0675.edf.bz2 successfully downloaded. 133s ok 133s INFO:memProf:Time: 1.507s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenEdf.testEdf 133s testEdfBz2 (fabio.test.test_open_image.TestOpenEdf.testEdfBz2) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 135s ok 135s INFO:memProf:Time: 1.707s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenEdf.testEdfBz2 135s testEdfGz (fabio.test.test_open_image.TestOpenEdf.testEdfGz) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.gz') 135s ok 135s INFO:memProf:Time: 0.231s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenEdf.testEdfGz 135s testMask (fabio.test.test_open_image.TestOpenMask.testMask) 135s openimage opening fit2d msk ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 135s INFO:fabio.utils.ExternalResources:Image face.msk.bz2 successfully downloaded. 135s ok 135s INFO:memProf:Time: 0.032s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMask.testMask 135s testMaskBz2 (fabio.test.test_open_image.TestOpenMask.testMaskBz2) 135s openimage opening fit2d msk bzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 135s ok 135s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMask.testMaskBz2 135s testMaskGz (fabio.test.test_open_image.TestOpenMask.testMaskGz) 135s openimage opening fit2d msk gzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.gz') 135s ok 135s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMask.testMaskGz 135s testMccd (fabio.test.test_open_image.TestOpenMccd.testMccd) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.bz2') 135s INFO:fabio.utils.ExternalResources:Image somedata_0001.mccd.bz2 successfully downloaded. 136s ok 136s INFO:memProf:Time: 0.406s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMccd.testMccd 136s testMccdBz2 (fabio.test.test_open_image.TestOpenMccd.testMccdBz2) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.bz2') 136s ok 136s INFO:memProf:Time: 0.182s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMccd.testMccdBz2 136s testMccdGz (fabio.test.test_open_image.TestOpenMccd.testMccdGz) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.gz') 136s ok 136s INFO:memProf:Time: 0.024s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMccd.testMccdGz 136s testOxd (fabio.test.test_open_image.TestOpenOxd.testOxd) 136s openimage opening adsc ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 136s INFO:fabio.utils.ExternalResources:Image b191_1_9_1.img.bz2 successfully downloaded. 136s ok 136s INFO:memProf:Time: 0.061s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenOxd.testOxd 136s testOxdUnc (fabio.test.test_open_image.TestOpenOxd.testOxdUnc) 136s openimage opening adsc ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 136s INFO:fabio.utils.ExternalResources:Image b191_1_9_1_uncompressed.img.bz2 successfully downloaded. 137s ok 137s INFO:memProf:Time: 1.075s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenOxd.testOxdUnc 137s testComp (fabio.test.test_compression.TestByteOffset.testComp) ... ok 137s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_compression.TestByteOffset.testComp 137s testSC (fabio.test.test_compression.TestByteOffset.testSC) 137s test that datasets are unchanged after various compression/decompressions ... ok 137s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_compression.TestByteOffset.testSC 137s test_from_time (fabio.test.test_nexus.TestNexus.test_from_time) ... ok 137s INFO:memProf:Time: 0.010s RAM: 0.000 Mb fabio.test.test_nexus.TestNexus.test_from_time 137s test_nexus (fabio.test.test_nexus.TestNexus.test_nexus) 137s Test creation of Nexus files ... ok 137s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.test_nexus.TestNexus.test_nexus 137s testDefaultOption (fabio.test.test_fabio_convert.TestFabioConvert.testDefaultOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -F=msk -o=output 137s INFO:fabio.test.test_fabio_convert:Return code: 0 137s ok 137s INFO:memProf:Time: 0.228s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testDefaultOption 137s testForceOption (fabio.test.test_fabio_convert.TestFabioConvert.testForceOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -f -F=msk -o=output 137s INFO:fabio.test.test_fabio_convert:Return code: 0 137s ok 137s INFO:memProf:Time: 0.218s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testForceOption 137s testFullFormatName (fabio.test.test_fabio_convert.TestFabioConvert.testFullFormatName) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.* -F=numpyimage -o=output 138s INFO:fabio.test.test_fabio_convert:Return code: 0 138s ok 138s INFO:memProf:Time: 0.223s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testFullFormatName 138s testInteractiveOption (fabio.test.test_fabio_convert.TestFabioConvert.testInteractiveOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -n -i -F=msk -o=output 138s INFO:fabio.test.test_fabio_convert:Return code: 0 138s ok 138s INFO:memProf:Time: 0.235s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testInteractiveOption 138s testNoClobberOption (fabio.test.test_fabio_convert.TestFabioConvert.testNoClobberOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -n -F=msk -o=output 138s INFO:fabio.test.test_fabio_convert:Return code: 0 138s ok 138s INFO:memProf:Time: 0.232s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testNoClobberOption 138s testRemoveDestinationOption (fabio.test.test_fabio_convert.TestFabioConvert.testRemoveDestinationOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf --remove-destination -F=msk -o=output 138s INFO:fabio.test.test_fabio_convert:Return code: 0 138s ok 138s INFO:memProf:Time: 0.226s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testRemoveDestinationOption 138s testSingleFile (fabio.test.test_fabio_convert.TestFabioConvert.testSingleFile) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.edf -o=output/03.msk 139s INFO:fabio.test.test_fabio_convert:Return code: 0 139s ok 139s INFO:memProf:Time: 0.355s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testSingleFile 139s testSingleFileToDir (fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileToDir) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.edf -F=msk -o=output 139s INFO:fabio.test.test_fabio_convert:Return code: 0 139s ok 139s INFO:memProf:Time: 0.264s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileToDir 139s testSingleFileWithWildcardToDir (fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileWithWildcardToDir) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.* -F=msk -o=output 139s INFO:fabio.test.test_fabio_convert:Return code: 0 139s ok 139s INFO:memProf:Time: 0.224s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileWithWildcardToDir 139s testUpdateOption (fabio.test.test_fabio_convert.TestFabioConvert.testUpdateOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf --update -F=msk -o=output 140s INFO:fabio.test.test_fabio_convert:Return code: 0 140s ok 140s INFO:memProf:Time: 0.220s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testUpdateOption 140s test_missing_file (fabio.test.test_failing_files.TestFailingFiles.test_missing_file) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_missing_file 140s test_wrong_dm3 (fabio.test.test_failing_files.TestFailingFiles.test_wrong_dm3) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_dm3 140s test_wrong_edf (fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf 140s test_wrong_edf2 (fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf2) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf2 140s test_wrong_format (fabio.test.test_failing_files.TestFailingFiles.test_wrong_format) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_format 140s test_wrong_msk (fabio.test.test_failing_files.TestFailingFiles.test_wrong_msk) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_msk 140s test_wrong_numpy (fabio.test.test_failing_files.TestFailingFiles.test_wrong_numpy) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_numpy 140s test_annotation (fabio.test.test_formats.TestRegistration.test_annotation) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_annotation 140s test_deprecated_fabioimage_factory (fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory) 140s Check that it is still working ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory 140s test_deprecated_fabioimage_factory_missing_format (fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory_missing_format) 140s Check that it is still working ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory_missing_format 140s test_fabio_factory (fabio.test.test_formats.TestRegistration.test_fabio_factory) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabio_factory 140s test_fabio_factory_missing_format (fabio.test.test_formats.TestRegistration.test_fabio_factory_missing_format) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabio_factory_missing_format 140s test_fabioformats_factory (fabio.test.test_formats.TestRegistration.test_fabioformats_factory) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabioformats_factory 140s test_fabioformats_factory_missing_format (fabio.test.test_formats.TestRegistration.test_fabioformats_factory_missing_format) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabioformats_factory_missing_format 140s test_function (fabio.test.test_formats.TestRegistration.test_function) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_function 140s test_not_existing (fabio.test.test_formats.TestRegistration.test_not_existing) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_not_existing 140s test_edf_to_tiff (fabio.test.test_image_convert.TestImageConvert.test_edf_to_tiff) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.edf') 140s INFO:fabio.utils.ExternalResources:Image face.edf.bz2 successfully downloaded. 140s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/face.edf (frame 0) misses mandatory keys: SIZE 140s ok 140s INFO:memProf:Time: 0.043s RAM: 0.000 Mb fabio.test.test_image_convert.TestImageConvert.test_edf_to_tiff 140s test_append (fabio.test.test_tiffio.TestTiffIO.test_append) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_tiffio.TestTiffIO.test_append 140s test_read (fabio.test.test_tiffio.TestTiffIO.test_read) ... INFO:fabio.test.test_tiffio:nRows = 100 140s INFO:fabio.test.test_tiffio:nColumns = 100 140s INFO:fabio.test.test_tiffio:nBits = 16 140s INFO:fabio.test.test_tiffio:compression = False 140s INFO:fabio.test.test_tiffio:compression_type = 1 140s INFO:fabio.test.test_tiffio:imageDescription = Title=1st 140s 140s INFO:fabio.test.test_tiffio:stripOffsets = [168] 140s INFO:fabio.test.test_tiffio:rowsPerStrip = 100 140s INFO:fabio.test.test_tiffio:stripByteCounts = [20000] 140s INFO:fabio.test.test_tiffio:software = PyMca.TiffIO 140s INFO:fabio.test.test_tiffio:date = Unknown Date 140s INFO:fabio.test.test_tiffio:sampleFormat = 1 140s INFO:fabio.test.test_tiffio:photometricInterpretation = 1 140s INFO:fabio.test.test_tiffio:info = {'Title': '1st'} 140s INFO:fabio.test.test_tiffio:data [0, 0:10] = [0 1 2 3 4 5 6 7 8 9] 140s ok 140s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_tiffio.TestTiffIO.test_read 140s test_write (fabio.test.test_tiffio.TestTiffIO.test_write) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_tiffio.TestTiffIO.test_write 140s test_single_frame_iterator (fabio.test.test_frames.TestFabioImage.test_single_frame_iterator) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestFabioImage.test_single_frame_iterator 140s test_content (fabio.test.test_frames.TestVirtualEdf.test_content) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_content 140s test_frames_abort_iteration (fabio.test.test_frames.TestVirtualEdf.test_frames_abort_iteration) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_frames_abort_iteration 140s test_frames_full_iteration (fabio.test.test_frames.TestVirtualEdf.test_frames_full_iteration) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_frames_full_iteration 140s test_frames_random_access (fabio.test.test_frames.TestVirtualEdf.test_frames_random_access) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_frames_random_access 140s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 140s INFO:fabio.utils.ExternalResources:Image multiframes.edf.bz2 successfully downloaded. 140s test_content (fabio.test.test_frames.TestEdf.test_content) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_content 140s test_frames_abort_iteration (fabio.test.test_frames.TestEdf.test_frames_abort_iteration) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_frames_abort_iteration 140s test_frames_full_iteration (fabio.test.test_frames.TestEdf.test_frames_full_iteration) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_frames_full_iteration 140s test_frames_random_access (fabio.test.test_frames.TestEdf.test_frames_random_access) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_frames_random_access 140s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.tif.bz2') 140s INFO:fabio.utils.ExternalResources:Image multiframes.tif.bz2 successfully downloaded. 140s test_content (fabio.test.test_frames.TestTiff.test_content) ... ok 140s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_content 140s test_frames_abort_iteration (fabio.test.test_frames.TestTiff.test_frames_abort_iteration) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_frames_abort_iteration 140s test_frames_full_iteration (fabio.test.test_frames.TestTiff.test_frames_full_iteration) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_frames_full_iteration 140s test_frames_random_access (fabio.test.test_frames.TestTiff.test_frames_random_access) ... ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_frames_random_access 140s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.tif.bz2') 140s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 140s test_frames_abort_iteration (fabio.test.test_frames.TestFileSeries.test_frames_abort_iteration) ... ok 140s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_frames.TestFileSeries.test_frames_abort_iteration 140s test_frames_full_iteration (fabio.test.test_frames.TestFileSeries.test_frames_full_iteration) ... ok 140s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_frames.TestFileSeries.test_frames_full_iteration 140s test_frames_random_access (fabio.test.test_frames.TestFileSeries.test_frames_random_access) ... ok 140s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_frames.TestFileSeries.test_frames_random_access 140s test_open (fabio.test.test_fabio.TestFabio.test_open) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 140s ok 140s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open 140s test_open_bytesio (fabio.test.test_fabio.TestFabio.test_open_bytesio) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 140s ok 140s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_bytesio 140s test_open_fabio_bytesio (fabio.test.test_fabio.TestFabio.test_open_fabio_bytesio) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 140s ok 140s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_fabio_bytesio 140s test_open_series (fabio.test.test_fabio.TestFabio.test_open_series) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 140s ok 140s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_series 140s test_open_series_first_filename (fabio.test.test_fabio.TestFabio.test_open_series_first_filename) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 140s ok 140s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_series_first_filename 140s test_open_series_with (fabio.test.test_fabio.TestFabio.test_open_series_with) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 140s ok 140s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_series_with 140s test_open_with (fabio.test.test_fabio.TestFabio.test_open_with) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 140s ok 140s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_with 140s test_getstats (fabio.test.codecs.test_edfimage.TestFlatEdfs.test_getstats) 140s test statistics ... INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 140s ok 140s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestFlatEdfs.test_getstats 140s test_headers (fabio.test.codecs.test_edfimage.TestFlatEdfs.test_headers) ... INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 140s ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestFlatEdfs.test_headers 140s test_read (fabio.test.codecs.test_edfimage.TestFlatEdfs.test_read) 140s check readable ... INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 140s ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestFlatEdfs.test_read 140s test_getstats (fabio.test.codecs.test_edfimage.TestBzipEdf.test_getstats) 140s test statistics ... INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 140s ok 140s INFO:memProf:Time: 0.060s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBzipEdf.test_getstats 140s test_headers (fabio.test.codecs.test_edfimage.TestBzipEdf.test_headers) ... INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 140s ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBzipEdf.test_headers 140s test_read (fabio.test.codecs.test_edfimage.TestBzipEdf.test_read) 140s check readable ... INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 140s ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBzipEdf.test_read 140s test_getstats (fabio.test.codecs.test_edfimage.TestGzipEdf.test_getstats) 140s test statistics ... INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 140s ok 140s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestGzipEdf.test_getstats 140s test_headers (fabio.test.codecs.test_edfimage.TestGzipEdf.test_headers) ... INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 140s ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestGzipEdf.test_headers 140s test_read (fabio.test.codecs.test_edfimage.TestGzipEdf.test_read) 140s check readable ... INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 140s ok 140s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestGzipEdf.test_read 140s test_read (fabio.test.codecs.test_edfimage.TestEdfs.test_read) 140s check we can read these images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 140s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('id13_badPadding.edf.bz2') 140s INFO:fabio.utils.ExternalResources:Image id13_badPadding.edf.bz2 successfully downloaded. 141s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf Mean: exp=1504.29, obt=1504.291387796402 141s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf StdDev: exp=217.61, obt=217.60628547694915 141s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.bz2 Mean: exp=1504.29, obt=1504.291387796402 141s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.bz2 StdDev: exp=217.61, obt=217.60628547694915 142s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.gz Mean: exp=1504.29, obt=1504.291387796402 142s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.gz StdDev: exp=217.61, obt=217.60628547694915 142s INFO:fabio.test.codecs.test_edfimage:id13_badPadding.edf Mean: exp=275.62, obt=275.6165885925293 142s INFO:fabio.test.codecs.test_edfimage:id13_badPadding.edf StdDev: exp=583.44, obt=583.4356660155632 142s ok 142s INFO:memProf:Time: 1.926s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfs.test_read 142s test_rebin (fabio.test.codecs.test_edfimage.TestEdfs.test_rebin) 142s test the rebin of edfdata ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 142s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('id13_badPadding.edf.bz2') 142s ok 142s INFO:memProf:Time: 0.016s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfs.test_rebin 142s test_read (fabio.test.codecs.test_edfimage.TestEdfCompressedData.test_read) 142s check we can read these images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfGzip_U16.edf.bz2') 142s INFO:fabio.utils.ExternalResources:Image edfGzip_U16.edf.bz2 successfully downloaded. 142s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfCompressed_U16.edf.bz2') 142s INFO:fabio.utils.ExternalResources:Image edfCompressed_U16.edf.bz2 successfully downloaded. 143s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfUncompressed_U16.edf.bz2') 143s INFO:fabio.utils.ExternalResources:Image edfUncompressed_U16.edf.bz2 successfully downloaded. 145s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 146s INFO:fabio.edfimage:Data stream is padded : 8389062 > required 8388608 bytes 146s ok 146s INFO:memProf:Time: 3.985s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfCompressedData.test_read 146s test_getFrame_mono (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_mono) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 146s INFO:fabio.utils.ExternalResources:Image MultiFrame.edf.bz2 successfully downloaded. 148s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 148s INFO:fabio.utils.ExternalResources:Image MultiFrame-Frame0.edf.bz2 successfully downloaded. 149s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 150s INFO:fabio.utils.ExternalResources:Image MultiFrame-Frame1.edf.bz2 successfully downloaded. 151s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 151s ok 151s INFO:memProf:Time: 5.216s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_mono 151s test_getFrame_multi (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_multi) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 151s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 151s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 151s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 151s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 151s ok 151s INFO:memProf:Time: 0.007s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_multi 151s test_next_multi (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_next_multi) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 151s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 151s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 151s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 151s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 151s ok 151s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_next_multi 151s test_openimage_multiframes (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_openimage_multiframes) 151s test if openimage can directly read first or second frame of a multi-frame ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 151s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 151s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 151s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 151s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 151s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 151s ok 151s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_openimage_multiframes 151s test_previous_mono (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_mono) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 151s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 151s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 151s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 151s ok 151s INFO:memProf:Time: 0.005s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_mono 151s test_previous_multi (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_multi) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 151s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 151s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 151s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 151s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 151s ok 151s INFO:memProf:Time: 0.005s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_multi 151s test_fastread (fabio.test.codecs.test_edfimage.TestEdfFastRead.test_fastread) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 151s ok 151s INFO:memProf:Time: 0.275s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfFastRead.test_fastread 151s testBzip2 (fabio.test.codecs.test_edfimage.TestEdfWrite.testBzip2) ... ok 151s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfWrite.testBzip2 151s testFlat (fabio.test.codecs.test_edfimage.TestEdfWrite.testFlat) ... ok 151s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfWrite.testFlat 151s testGzip (fabio.test.codecs.test_edfimage.TestEdfWrite.testGzip) ... ok 151s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfWrite.testGzip 151s test_bug_27 (fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_27) 151s import fabio ... ok 151s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_27 151s test_bug_459 (fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_459) ... ok 151s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_459 151s test_remove_metadata_header (fabio.test.codecs.test_edfimage.TestEdfRegression.test_remove_metadata_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.edf.bz2') 151s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/face.edf (frame 0) misses mandatory keys: SIZE 151s ok 151s INFO:memProf:Time: 0.013s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfRegression.test_remove_metadata_header 151s test_base (fabio.test.codecs.test_edfimage.TestBadFiles.test_base) ... INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_base.edf (frame 0) misses mandatory keys: SIZE HEADERID 151s INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_base.edf (frame 1) misses mandatory keys: SIZE HEADERID 151s ok 151s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_base 151s test_empty (fabio.test.codecs.test_edfimage.TestBadFiles.test_empty) ... ok 151s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_empty 151s test_full_frame_plus_half_header (fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_half_header) ... INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_half_header.edf (frame 0) misses mandatory keys: SIZE HEADERID 151s ok 151s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_half_header 151s test_full_frame_plus_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data.edf (frame 0) misses mandatory keys: SIZE HEADERID 151s INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data.edf (frame 1) misses mandatory keys: SIZE HEADERID 151s ERROR:fabio.edfimage:Data stream is incomplete: 131072 < expected 262144 bytes 151s ok 151s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data 151s test_full_frame_plus_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data.edf (frame 0) misses mandatory keys: SIZE HEADERID 151s INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data.edf (frame 1) misses mandatory keys: SIZE HEADERID 151s ok 151s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data 151s test_half_header (fabio.test.codecs.test_edfimage.TestBadFiles.test_half_header) ... ok 151s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_half_header 151s test_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_half_data.edf (frame 0) misses mandatory keys: SIZE HEADERID 151s ERROR:fabio.edfimage:Data stream is incomplete: 131072 < expected 262144 bytes 151s ok 151s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_half_data 151s test_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_no_data.edf (frame 0) misses mandatory keys: SIZE HEADERID 151s ok 151s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_no_data 151s test_wrong_magic (fabio.test.codecs.test_edfimage.TestBadFiles.test_wrong_magic) ... ok 151s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_wrong_magic 151s test_base (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base) ... INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base.edf.gz (frame 0) misses mandatory keys: SIZE HEADERID 151s INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base.edf.gz (frame 1) misses mandatory keys: SIZE HEADERID 151s ok 151s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base 151s test_empty (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_empty) ... ok 151s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_empty 151s test_full_frame_plus_half_header (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_half_header) ... INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_half_header.edf.gz (frame 0) misses mandatory keys: SIZE HEADERID 151s ok 151s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_half_header 151s test_full_frame_plus_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data.edf.gz (frame 0) misses mandatory keys: SIZE HEADERID 151s INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data.edf.gz (frame 1) misses mandatory keys: SIZE HEADERID 151s ok 151s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data 151s test_full_frame_plus_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data.edf.gz (frame 0) misses mandatory keys: SIZE HEADERID 151s INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data.edf.gz (frame 1) misses mandatory keys: SIZE HEADERID 151s ok 151s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data 151s test_half_header (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_half_header) ... ok 151s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_half_header 151s test_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_half_data.edf.gz (frame 0) misses mandatory keys: SIZE HEADERID 151s ok 151s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_half_data 151s test_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio__mpk0_6p_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_no_data.edf.gz (frame 0) misses mandatory keys: SIZE HEADERID 151s ok 151s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_no_data 151s test_wrong_magic (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_wrong_magic) ... ok 151s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_wrong_magic 151s test_multi_frame (fabio.test.codecs.test_edfimage.TestEdfIterator.test_multi_frame) 151s Test iterator on a multi-frame EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 152s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 152s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 152s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 152s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 152s ok 152s INFO:memProf:Time: 0.775s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfIterator.test_multi_frame 152s test_single_frame (fabio.test.codecs.test_edfimage.TestEdfIterator.test_single_frame) 152s Test iterator on a single frame EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfCompressed_U16.edf') 152s ok 152s INFO:memProf:Time: 0.482s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfIterator.test_single_frame 152s test_all_images (fabio.test.codecs.test_edfimage.TestSphere2SaxsSamples.test_all_images) ... INFO:fabio.utils.ExternalResources:Image sphere2saxs_output.tar.bz2 successfully downloaded. 152s WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/utils/ExternalResources.py:214: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 152s fd.extractall(output) 152s 152s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 152s INFO:fabio.edfimage:Data stream is padded : 80484 > required 80000 bytes 152s INFO:fabio.edfimage:Data stream is padded : 80384 > required 80000 bytes 152s INFO:fabio.edfimage:Data stream is padded : 80384 > required 80000 bytes 152s INFO:fabio.edfimage:Data stream is padded : 80384 > required 80000 bytes 152s ok 152s INFO:memProf:Time: 0.076s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestSphere2SaxsSamples.test_all_images 152s testNonAsciiHeader (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testNonAsciiHeader) 152s Non-ascii characters are skipped. ... WARNING:fabio.edfimage:Non ASCII in key-value: Drop b'mykey' = b'\xc3\xa9yvalue' 152s ok 152s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testNonAsciiHeader 152s testReadBadPadding (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadBadPadding) 152s Some old data were found with headers padded with 0xcd (issue #373) ... ok 152s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadBadPadding 152s testReadGoodPadding (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadGoodPadding) ... ok 152s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadGoodPadding 152s testReadZeroPadding (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadZeroPadding) ... ok 152s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadZeroPadding 152s test_edf6_single_raw_bf_gblk_gz (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edf6_single_raw_bf_gblk_gz) 153s Test reading gzipped data files linking to an external binary data file. ... INFO:fabio.utils.ExternalResources:Image ehf_images2.tar.bz2 successfully downloaded. 153s WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/utils/ExternalResources.py:214: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 153s fd.extractall(output) 153s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 153s ok 153s INFO:memProf:Time: 0.238s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edf6_single_raw_bf_gblk_gz 153s test_edfblocktypes (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfblocktypes) 153s Test reading (gzipped) extended edf multi frame data files with and without a general block ... INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 153s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 153s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 153s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 153s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 153s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 153s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 153s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 153s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 153s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 153s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 153s INFO:fabio.edfimage:Data stream is padded : 2875 > required 2400 bytes 153s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 153s INFO:fabio.edfimage:Data stream is padded : 2874 > required 2400 bytes 153s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 153s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 153s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 153s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 153s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 153s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 153s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 153s INFO:fabio.edfimage:Data stream is padded : 2875 > required 2400 bytes 153s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 153s INFO:fabio.edfimage:Data stream is padded : 2874 > required 2400 bytes 153s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 153s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 153s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 153s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 153s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 153s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 153s ok 153s INFO:memProf:Time: 0.155s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfblocktypes 153s test_edfmulti_raw_bf_gblk (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk) 153s Reading an uncompressed edf-multi-frame-file with references to data ... WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/utils/ExternalResources.py:214: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 153s fd.extractall(output) 153s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 153s ok 153s INFO:memProf:Time: 0.246s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk 153s test_edfmulti_raw_bf_gblk_gz (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk_gz) 153s Test reading the files of the test test_edfmulti_raw_bf_gblk after ... WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 153s ok 153s INFO:memProf:Time: 0.265s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk_gz 153s test_edfmulti_raw_dark_raw_bf_gblk (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_dark_raw_bf_gblk) 153s Linking data of several frames to different parts of a single external ... INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 153s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 153s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 153s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 153s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 153s ok 153s INFO:memProf:Time: 0.130s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_dark_raw_bf_gblk 153s test_edfsingle_raw_bf_gblk (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk) 154s Reading an uncompressed edf-single-frame-file with references to data ... WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 154s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 154s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 154s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 154s ok 154s INFO:memProf:Time: 0.125s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk 154s test_edfsingle_raw_bf_gblk_gz (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk_gz) 154s Test reading gzipped data files linking to an external binary data file. ... WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 154s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 154s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 154s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 154s ok 154s INFO:memProf:Time: 0.124s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk_gz 154s test_pitfalls (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_pitfalls) 154s multi5+headerblob_edf1.edf.gz ... INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 154s ok 154s INFO:memProf:Time: 0.156s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_pitfalls 154s test_special (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_special) 154s 09_special/face_ok.edf.gz ... INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_ok.edf.gz (frame 0) misses mandatory keys: SIZE 154s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_ok.edf.gz (frame 0) misses mandatory keys: SIZE 154s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary1.edf.gz (frame 0) misses mandatory keys: SIZE 154s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary1.edf.gz (frame 0) misses mandatory keys: SIZE 154s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary2.edf.gz (frame 0) misses mandatory keys: SIZE 154s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary2.edf.gz (frame 0) misses mandatory keys: SIZE 154s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary3.edf.gz (frame 0) misses mandatory keys: SIZE 154s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary3.edf.gz (frame 0) misses mandatory keys: SIZE 154s ok 154s INFO:memProf:Time: 0.132s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_special 154s test_bug_388 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_388) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 154s INFO:fabio.utils.ExternalResources:Image run2_1_00148.edf.bz2 successfully downloaded. 175s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 175s INFO:fabio.utils.ExternalResources:Image run2_1_00148.cbf.bz2 successfully downloaded. 176s ok 176s INFO:memProf:Time: 22.142s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_388 176s test_bug_408 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_408) 176s Bug when reading files generated by XDS ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 176s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 176s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XDS.cbf.bz2') 177s INFO:fabio.utils.ExternalResources:Image XDS.cbf.bz2 successfully downloaded. 177s ok 177s INFO:memProf:Time: 0.922s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_408 177s test_bug_528 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_528) 177s Bug when writing/reading small files ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 177s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 177s ok 177s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_528 177s test_bug_535 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_535) 177s Bug when reading files with long path in header ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 177s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 177s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('ref-test_5_0001.cbf') 177s INFO:fabio.utils.ExternalResources:Image ref-test_5_0001.cbf.bz2 successfully downloaded. 179s ok 179s INFO:memProf:Time: 2.385s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_535 179s test_byte_offset (fabio.test.codecs.test_cbfimage.TestCbfReader.test_byte_offset) 179s check byte offset algorithm ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 179s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 180s INFO:fabio.test.codecs.test_cbfimage:Timing for Numpy method : 0.089s 180s INFO:fabio.test.codecs.test_cbfimage:Timing for Cython method : 0.012s, max delta= 0 180s ok 180s INFO:memProf:Time: 0.142s RAM: 0.536 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_byte_offset 180s test_cif (fabio.test.codecs.test_cbfimage.TestCbfReader.test_cif) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 180s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 180s ok 180s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_cif 180s test_consitency_convert (fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_convert) 180s Test if an image can be read and saved and the results are "similar" ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 180s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 180s ok 180s INFO:memProf:Time: 0.095s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_convert 180s test_consitency_manual (fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_manual) 180s Test if an image can be read and saved and the results are "similar" ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 180s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 180s ok 180s INFO:memProf:Time: 0.111s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_manual 180s test_read (fabio.test.codecs.test_cbfimage.TestCbfReader.test_read) 180s check whole reader ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 180s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 180s INFO:fabio.test.codecs.test_cbfimage:Reading CBF took 0.025s whereas the same EDF took 0.000s 180s ok 180s INFO:memProf:Time: 0.056s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_read 180s test_unicode (fabio.test.codecs.test_cbfimage.TestCbfReader.test_unicode) 180s Test if an image can be read and saved to an unicode named ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 180s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 180s ok 180s INFO:memProf:Time: 0.099s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_unicode 180s test_write (fabio.test.codecs.test_cbfimage.TestCbfReader.test_write) 180s Rest writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 180s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 180s ok 180s INFO:memProf:Time: 0.100s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_write 180s testsame (fabio.test.codecs.test_dtrekimage.TestMatch.testsame) 180s test ADSC image match to EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 180s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.edf.bz2') 180s INFO:fabio.utils.ExternalResources:Image mb_LP_1_001.edf.bz2 successfully downloaded. 209s ok 209s INFO:memProf:Time: 28.912s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestMatch.testsame 209s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('HSA_1_5mg_C1_0004.img.bz2') 209s INFO:fabio.utils.ExternalResources:Image HSA_1_5mg_C1_0004.img.bz2 successfully downloaded. 210s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 210s test_read (fabio.test.codecs.test_dtrekimage.TestRealSamples.test_read) 211s check we can read flat ADSC images ... ok 211s INFO:memProf:Time: 0.930s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestRealSamples.test_read 211s test_write_and_read (fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read) ... WARNING:fabio.dtrekimage:Data type uint64 unsupported. Store it as uint32. 211s WARNING:fabio.dtrekimage:Data type int64 unsupported. Store it as int32. 211s WARNING:fabio.dtrekimage:Data type float16 unsupported. Store it as float32. 211s ok 211s INFO:memProf:Time: 0.018s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read 211s test_write_and_read_cube (fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_cube) ... ok 211s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_cube 211s test_write_and_read_empty (fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_empty) ... ok 211s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_empty 211s test_getmatch (fabio.test.codecs.test_fit2dmaskimage.TestFaceMask.test_getmatch) 211s test edf and msk are the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 211s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.edf.bz2') 211s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/face.edf (frame 0) misses mandatory keys: SIZE 211s ok 211s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestFaceMask.test_getmatch 211s test_getmatch (fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_getmatch) 211s test edf and msk are the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.msk.bz2') 211s INFO:fabio.utils.ExternalResources:Image fit2d_click.msk.bz2 successfully downloaded. 211s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.edf.bz2') 211s INFO:fabio.utils.ExternalResources:Image fit2d_click.edf.bz2 successfully downloaded. 211s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/fit2d_click.edf (frame 0) misses mandatory keys: SIZE 211s ok 211s INFO:memProf:Time: 0.129s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_getmatch 211s test_read (fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_read) 211s Check it reads a mask OK ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.msk.bz2') 211s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.edf.bz2') 211s ok 211s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_read 211s testBzip2 (fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testBzip2) ... ok 211s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testBzip2 211s testFlat (fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testFlat) ... ok 211s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testFlat 211s testGzip (fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testGzip) ... ok 211s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testGzip 211s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.spr.bz2') 211s INFO:fabio.utils.ExternalResources:Image example.spr.bz2 successfully downloaded. 213s test_read (fabio.test.codecs.test_fit2dspreadsheetimage.TestRealSamples.test_read) 217s check we can read flat ADSC images ... ok 217s INFO:memProf:Time: 4.466s RAM: 0.000 Mb fabio.test.codecs.test_fit2dspreadsheetimage.TestRealSamples.test_read 217s test_read (fabio.test.codecs.test_geimage.TestGE.test_read) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_aSI_detector_image_1529.bz2') 217s INFO:fabio.utils.ExternalResources:Image GE_aSI_detector_image_1529.bz2 successfully downloaded. 220s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_aSI_detector_image_1529.gz') 220s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_aSI_detector_image_1529') 222s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_image_1frame_intact_header.ge') 222s INFO:fabio.utils.ExternalResources:Image GE_image_1frame_intact_header.ge.bz2 successfully downloaded. 224s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_image_1frame_blanked_header.ge') 224s INFO:fabio.utils.ExternalResources:Image GE_image_1frame_blanked_header.ge.bz2 successfully downloaded. 225s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('dark_before_000428.edf.ge5') 226s INFO:fabio.utils.ExternalResources:Image dark_before_000428.edf.ge5.bz2 successfully downloaded. 241s ok 241s INFO:memProf:Time: 24.239s RAM: 0.000 Mb fabio.test.codecs.test_geimage.TestGE.test_read 241s test_aux (fabio.test.codecs.test_mar345image.TestMar345.test_aux) 241s test auxillary functions ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 242s INFO:fabio.utils.ExternalResources:Image example.mar2300.bz2 successfully downloaded. 242s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 242s INFO:fabio.utils.ExternalResources:Image Fe3O4_023_101.mar2560.bz2 successfully downloaded. 243s ok 243s INFO:memProf:Time: 1.341s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_aux 243s test_byteswap_write (fabio.test.codecs.test_mar345image.TestMar345.test_byteswap_write) 243s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 243s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 247s ok 247s INFO:memProf:Time: 4.583s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_byteswap_write 247s test_memoryleak (fabio.test.codecs.test_mar345image.TestMar345.test_memoryleak) 247s This test takes a lot of time, so only in debug mode. ... skipped 'very slow test' 247s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_memoryleak 247s test_read (fabio.test.codecs.test_mar345image.TestMar345.test_read) 247s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 247s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 247s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300') 248s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 248s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.gz') 248s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560') 249s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 250s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.gz') 250s ok 250s INFO:memProf:Time: 2.355s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_read 250s test_write (fabio.test.codecs.test_mar345image.TestMar345.test_write) 250s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 250s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 254s ok 254s INFO:memProf:Time: 4.590s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_write 254s test_read (fabio.test.codecs.test_brukerimage.TestBruker.test_read) 254s see if we can read the test image ... ok 254s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestBruker.test_read 254s test_read (fabio.test.codecs.test_brukerimage.TestBzipBruker.test_read) 254s see if we can read the test image ... ok 254s INFO:memProf:Time: 0.047s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestBzipBruker.test_read 254s test_read (fabio.test.codecs.test_brukerimage.TestGzipBruker.test_read) 254s see if we can read the test image ... ok 254s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestGzipBruker.test_read 254s test_read (fabio.test.codecs.test_brukerimage.TestRealImg.test_read) 254s check we can read bruker images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 254s ok 254s INFO:memProf:Time: 0.032s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestRealImg.test_read 254s test_write (fabio.test.codecs.test_brukerimage.TestRealImg.test_write) 254s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 255s ok 255s INFO:memProf:Time: 0.161s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestRealImg.test_write 255s test_linear (fabio.test.codecs.test_brukerimage.TestBrukerLinear.test_linear) 255s test for self consistency of random data read/write ... WARNING:fabio.brukerimage:performing correction with slope=5.960434634742382e-08, offset=1.1630697e-06 (LINEAR=5.960434634742382e-08 1.1630697e-06) 255s ok 255s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestBrukerLinear.test_linear 255s test_conversion (fabio.test.codecs.test_bruker100image.TestBruker100.test_conversion) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 255s INFO:fabio.utils.ExternalResources:Image NaCl_10_01_0009.npy.bz2 successfully downloaded. 256s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 256s INFO:fabio.utils.ExternalResources:Image NaCl_10_01_0009.sfrm.bz2 successfully downloaded. 256s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('testcbf.cbf.bz2') 256s INFO:fabio.utils.ExternalResources:Image testcbf.cbf.bz2 successfully downloaded. 256s ok 256s INFO:memProf:Time: 1.307s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_conversion 256s test_read (fabio.test.codecs.test_bruker100image.TestBruker100.test_read) 256s check we can read bruker100 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 256s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 256s ok 256s INFO:memProf:Time: 0.023s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_read 256s test_same (fabio.test.codecs.test_bruker100image.TestBruker100.test_same) 256s check we can read bruker100 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 256s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 256s ok 256s INFO:memProf:Time: 0.080s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_same 256s test_split_merge (fabio.test.codecs.test_bruker100image.TestBruker100.test_split_merge) 256s Pretty challanging random example ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 256s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 256s INFO:fabio.test.codecs.test_bruker100image:size of underflow: (65167,) overflow1 (100,) overflow2: (95,) 256s INFO:fabio.test.codecs.test_bruker100image:size of underflow: (1615,) overflow1 (163,) overflow2: (95,) 256s INFO:fabio.test.codecs.test_bruker100image:size of underflow: (0,) overflow1 (1647,) overflow2: (1579,) 256s ok 256s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_split_merge 256s test_write (fabio.test.codecs.test_bruker100image.TestBruker100.test_write) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 256s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 256s ok 256s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_write 256s test_read (fabio.test.codecs.test_mccdimage.TestFlatMccds.test_read) 256s check we can read MarCCD images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('corkcont2_H_0089.mccd.bz2') 256s INFO:fabio.utils.ExternalResources:Image corkcont2_H_0089.mccd.bz2 successfully downloaded. 258s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.bz2') 258s ok 258s INFO:memProf:Time: 2.425s RAM: 0.000 Mb fabio.test.codecs.test_mccdimage.TestFlatMccds.test_read 258s test_read_openimage (fabio.test.codecs.test_mccdimage.TestNormalTiffOK.test_read_openimage) ... ok 258s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_mccdimage.TestNormalTiffOK.test_read_openimage 258s test_read (fabio.test.codecs.test_oxdimage.TestOxd.test_read) 258s Test reading of compressed OXD images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 258s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 258s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('100nmfilmonglass_1_1.img.bz2') 259s INFO:fabio.utils.ExternalResources:Image 100nmfilmonglass_1_1.img.bz2 successfully downloaded. 259s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus300k.rod_img.bz2') 259s INFO:fabio.utils.ExternalResources:Image pilatus300k.rod_img.bz2 successfully downloaded. 260s INFO:fabio.OXDimage:Compressed with the TY5 compression 260s INFO:fabio.OXDimage:TY5 decompression is slow for now 263s INFO:fabio.OXDimage:TY5: Exception: 16bits: 2844, 32bits: 0 263s ok 263s INFO:memProf:Time: 4.209s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxd.test_read 263s test_write (fabio.test.codecs.test_oxdimage.TestOxd.test_write) 263s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 263s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 263s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('100nmfilmonglass_1_1.img.bz2') 263s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus300k.rod_img.bz2') 263s INFO:fabio.test.codecs.test_oxdimage:Skip write test for now 263s INFO:fabio.OXDimage:Compressed with the TY5 compression 263s INFO:fabio.OXDimage:TY5 decompression is slow for now 265s INFO:fabio.OXDimage:TY5: Exception: 16bits: 2844, 32bits: 0 265s INFO:fabio.test.codecs.test_oxdimage:Skip write test for now 265s INFO:fabio.test.codecs.test_oxdimage:Skip write test for now 265s ok 265s INFO:memProf:Time: 2.721s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxd.test_write 265s test_same (fabio.test.codecs.test_oxdimage.TestOxdSame.test_same) 265s test if images are actually the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 265s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 265s ok 265s INFO:memProf:Time: 0.007s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxdSame.test_same 265s test_same (fabio.test.codecs.test_oxdimage.TestOxdBig.test_same) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('d80_60s.img.bz2') 266s INFO:fabio.utils.ExternalResources:Image d80_60s.img.bz2 successfully downloaded. 269s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('d80_60s.edf.bz2') 270s INFO:fabio.utils.ExternalResources:Image d80_60s.edf.bz2 successfully downloaded. 274s WARNING:fabio.edfimage:Unknown compression scheme TY1 274s ok 274s INFO:memProf:Time: 9.131s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxdBig.test_same 274s test_convert (fabio.test.codecs.test_oxdimage.TestConvert.test_convert) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 274s WARNING:fabio.OXDimage:Enforce TY1 compression 274s ok 274s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestConvert.test_convert 274s test_read (fabio.test.codecs.test_kcdimage.TestKcd.test_read) 274s check we can read kcd images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.kcd.bz2') 274s INFO:fabio.utils.ExternalResources:Image i01f0001.kcd.bz2 successfully downloaded. 276s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.edf.bz2') 276s INFO:fabio.utils.ExternalResources:Image i01f0001.edf.bz2 successfully downloaded. 278s ok 278s INFO:memProf:Time: 3.717s RAM: 0.000 Mb fabio.test.codecs.test_kcdimage.TestKcd.test_read 278s test_same (fabio.test.codecs.test_kcdimage.TestKcd.test_same) 278s see if we can read kcd images and if they are the same as the EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.kcd.bz2') 278s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.edf.bz2') 279s ok 279s INFO:memProf:Time: 0.544s RAM: 0.000 Mb fabio.test.codecs.test_kcdimage.TestKcd.test_same 279s test_bug502 (fabio.test.codecs.test_tifimage.TestTif.test_bug502) 279s Test the reading of a frame with wrong Photometric interpretation ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('frame_00017.npy') 279s INFO:fabio.utils.ExternalResources:Image frame_00017.npy.bz2 successfully downloaded. 288s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('frame_00017.tif') 288s INFO:fabio.utils.ExternalResources:Image frame_00017.tif.bz2 successfully downloaded. 297s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 297s ok 297s INFO:memProf:Time: 17.992s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_bug502 297s test_frame (fabio.test.codecs.test_tifimage.TestTif.test_frame) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.bz2') 297s INFO:fabio.utils.ExternalResources:Image Feb09-bright-00.300s_WAXS.bz2 successfully downloaded. 297s WARNING:fabio.TiffIO:Bogus StripByteCounts information 297s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.gz') 297s WARNING:fabio.TiffIO:Bogus StripByteCounts information 297s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS') 298s WARNING:fabio.TiffIO:Bogus StripByteCounts information 298s ok 298s INFO:memProf:Time: 0.859s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_frame 298s test_header (fabio.test.codecs.test_tifimage.TestTif.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.bz2') 298s WARNING:fabio.TiffIO:Bogus StripByteCounts information 298s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.gz') 298s WARNING:fabio.TiffIO:Bogus StripByteCounts information 298s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS') 298s WARNING:fabio.TiffIO:Bogus StripByteCounts information 298s ok 298s INFO:memProf:Time: 0.144s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_header 298s test_read (fabio.test.codecs.test_tifimage.TestTif.test_read) 298s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.bz2') 298s WARNING:fabio.TiffIO:Bogus StripByteCounts information 298s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.gz') 298s WARNING:fabio.TiffIO:Bogus StripByteCounts information 298s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS') 298s WARNING:fabio.TiffIO:Bogus StripByteCounts information 298s ok 298s INFO:memProf:Time: 0.152s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_read 298s test1 (fabio.test.codecs.test_tifimage.TestGzipTif.test1) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('oPPA_5grains_0001.tif.bz2') 298s INFO:fabio.utils.ExternalResources:Image oPPA_5grains_0001.tif.bz2 successfully downloaded. 298s ok 298s INFO:memProf:Time: 0.305s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestGzipTif.test1 298s test1 (fabio.test.codecs.test_tifimage.TestTif_Rect.test1) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('testmap1_0002.tif.bz2') 298s INFO:fabio.utils.ExternalResources:Image testmap1_0002.tif.bz2 successfully downloaded. 298s ok 298s INFO:memProf:Time: 0.025s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_Rect.test1 298s test1 (fabio.test.codecs.test_tifimage.TestTifImage_A0009.test1) 298s Testing packbit comressed data tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('a0009.tif.bz2') 298s INFO:fabio.utils.ExternalResources:Image a0009.tif.bz2 successfully downloaded. 299s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('a0009.edf.bz2') 299s INFO:fabio.utils.ExternalResources:Image a0009.edf.bz2 successfully downloaded. 299s WARNING:fabio.TiffIO:Non standard TIFF. Rows per strip TAG missing 299s WARNING:fabio.TiffIO:Non standard TIFF. Strip byte counts TAG missing 299s ok 299s INFO:memProf:Time: 1.024s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_A0009.test1 299s test1 (fabio.test.codecs.test_tifimage.TestTifImage_fit2d.test1) 299s Testing packbit comressed data tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 299s INFO:fabio.utils.ExternalResources:Image fit2d.tif.bz2 successfully downloaded. 299s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.edf.bz2') 299s INFO:fabio.utils.ExternalResources:Image fit2d.edf.bz2 successfully downloaded. 299s WARNING:fabio.TiffIO:TIFF file tag 270 contains non ASCII/UTF-8 characters. 299s WARNING:fabio.edfimage:Unknown compression scheme FALSE 299s ok 299s INFO:memProf:Time: 0.043s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_fit2d.test1 299s test1 (fabio.test.codecs.test_tifimage.TestTifImage_Packbits.test1) 299s Testing packbit comressed data tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('oPPA_5grains_0001.tif.bz2') 299s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('oPPA_5grains_0001.edf.bz2') 299s INFO:fabio.utils.ExternalResources:Image oPPA_5grains_0001.edf.bz2 successfully downloaded. 300s ok 300s INFO:memProf:Time: 0.623s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_Packbits.test1 300s test1 (fabio.test.codecs.test_tifimage.TestTifImage_Pilatus.test1) 300s Testing pilatus tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus2M.tif.bz2') 300s INFO:fabio.utils.ExternalResources:Image pilatus2M.tif.bz2 successfully downloaded. 308s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus2M.edf.bz2') 308s INFO:fabio.utils.ExternalResources:Image pilatus2M.edf.bz2 successfully downloaded. 317s WARNING:fabio.TiffIO:TIFF file tag 270 contains non ASCII/UTF-8 characters. 317s ok 317s INFO:memProf:Time: 17.412s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_Pilatus.test1 317s test_pil (fabio.test.codecs.test_tifimage.TestTif_Colormap.test_pil) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('indexed_color.tif.bz2') 317s INFO:fabio.utils.ExternalResources:Image indexed_color.tif.bz2 successfully downloaded. 317s ok 317s INFO:memProf:Time: 0.093s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_Colormap.test_pil 317s test_tiffio (fabio.test.codecs.test_tifimage.TestTif_Colormap.test_tiffio) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('indexed_color.tif.bz2') 317s WARNING:fabio.tifimage:Third dimension is the color 317s WARNING:fabio.tifimage:Third dimension is the color 317s WARNING:fabio.tifimage:Third dimension is the color 317s ok 317s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_Colormap.test_tiffio 318s test_all_images (fabio.test.codecs.test_tifimage.TestTif_LibTiffPic.test_all_images) ... INFO:fabio.utils.ExternalResources:Image libtiffpic.tar.gz successfully downloaded. 318s WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/utils/ExternalResources.py:214: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 318s fd.extractall(output) 318s 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif with TiffIO due to Unsupported number of bits for unsigned int: (4, 4, 4), trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif' mode='rb' closefd=True> 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif: no tiff reader managed to read the file. 318s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/dscf0013.tif with TiffIO due to could not broadcast input array from shape (10,640,3) into shape (15,640,3), trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/dscf0013.tif with PIL: image file is truncated (1280 bytes not processed) 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/dscf0013.tif: no tiff reader managed to read the file. 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif with TiffIO due to Unsupported number of bits for unsigned int: (10, 10, 10), trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif' mode='rb' closefd=True> 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif: no tiff reader managed to read the file. 318s WARNING:fabio.tifimage:Third dimension is the color 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif with TiffIO due to Unsupported number of bits for unsigned int: (12, 12, 12), trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif' mode='rb' closefd=True> 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif: no tiff reader managed to read the file. 318s WARNING:fabio.TiffIO:Data at tag id '37439' is smaller than expected 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif' mode='rb' closefd=True> 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif: no tiff reader managed to read the file. 318s WARNING:fabio.TiffIO:Data at tag id '37439' is smaller than expected 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif' mode='rb' closefd=True> 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif: no tiff reader managed to read the file. 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/zackthecat.tif with TiffIO due to 273 is not in list, trying PIL 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif with TiffIO due to Unsupported number of bits for unsigned int: (10, 10, 10), trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif' mode='rb' closefd=True> 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif: no tiff reader managed to read the file. 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-02.tif with TiffIO due to Unsupported number of bits for unsigned int: 2, trying PIL 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif with TiffIO due to Unsupported number of bits for unsigned int: (14, 14, 14), trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif' mode='rb' closefd=True> 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif: no tiff reader managed to read the file. 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-08.tif with TiffIO due to cannot reshape array of size 3139 into shape (73,3), trying PIL 318s WARNING:fabio.tifimage:Third dimension is the color 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif with TiffIO due to Unsupported number of bits for unsigned int: (12, 12, 12), trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif' mode='rb' closefd=True> 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif: no tiff reader managed to read the file. 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-04.tif with TiffIO due to Unsupported number of bits for unsigned int: 4, trying PIL 318s WARNING:fabio.tifimage:Third dimension is the color 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/ycbcr-cat.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif with TiffIO due to Unsupported number of bits for unsigned int: (14, 14, 14), trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif' mode='rb' closefd=True> 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif: no tiff reader managed to read the file. 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif with TiffIO due to Unsupported number of bits for unsigned int: 6, trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif' mode='rb' closefd=True> 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif: no tiff reader managed to read the file. 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/fax2d.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif with TiffIO due to Unsupported number of bits for unsigned int: 10, trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif' mode='rb' closefd=True> 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif: no tiff reader managed to read the file. 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-16.tif with TiffIO due to cannot reshape array of size 3139 into shape (73,3), trying PIL 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/strike.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 318s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-08.tif with TiffIO due to Unsupported number of bits for unsigned int: (8, 8, 8, 8), trying PIL 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif with TiffIO due to Unsupported number of bits for unsigned int: 12, trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif' mode='rb' closefd=True> 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif: no tiff reader managed to read the file. 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/cramps-tile.tif with TiffIO due to cannot reshape array of size 65536 into shape (800), trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/cramps-tile.tif with PIL: image file is truncated (126 bytes not processed) 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/cramps-tile.tif: no tiff reader managed to read the file. 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif with TiffIO due to %d format: a real number is required, not bytes, trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif' mode='rb' closefd=True> 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif: no tiff reader managed to read the file. 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/text.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 318s ThunderDecode: Not enough data at scanline 320 (0 != 1512). 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/smallliz.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/g3test.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif with TiffIO due to Unsupported number of bits for unsigned int: 14, trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif' mode='rb' closefd=True> 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif: no tiff reader managed to read the file. 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/oxford.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 318s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-08.tif with TiffIO due to Unsupported number of bits for unsigned int: (8, 8, 8, 8), trying PIL 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/quad-tile.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/quad-lzw.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif with TiffIO due to %d format: a real number is required, not bytes, trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif' mode='rb' closefd=True> 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif: no tiff reader managed to read the file. 318s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-16.tif with TiffIO due to Unsupported number of bits for unsigned int: (16, 16, 16, 16), trying PIL 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/jim___ah.tif with TiffIO due to Unsupported number of bits for unsigned int: 1, trying PIL 318s WARNING:fabio.tifimage:Third dimension is the color 318s WARNING:fabio.tifimage:Third dimension is the color 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-palette-02.tif with TiffIO due to Unsupported number of bits for unsigned int: 2, trying PIL 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif' mode='rb' closefd=True> 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif: no tiff reader managed to read the file. 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif with TiffIO due to Unsupported number of bits for unsigned int: (2, 2, 2), trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif' mode='rb' closefd=True> 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif: no tiff reader managed to read the file. 318s WARNING:fabio.tifimage:Third dimension is the color 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-palette-04.tif with TiffIO due to Unsupported number of bits for unsigned int: 4, trying PIL 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif with TiffIO due to Unsupported number of bits for unsigned int: 24, trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif' mode='rb' closefd=True> 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif: no tiff reader managed to read the file. 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif with TiffIO due to Unsupported number of bits for unsigned int: (4, 4, 4), trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif' mode='rb' closefd=True> 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif: no tiff reader managed to read the file. 318s WARNING:fabio.TiffIO:Data at tag id '37439' is smaller than expected 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif' mode='rb' closefd=True> 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif: no tiff reader managed to read the file. 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/ladoga.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 318s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-16.tif with TiffIO due to Unsupported number of bits for unsigned int: (16, 16, 16, 16), trying PIL 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/quad-jpeg.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif with TiffIO due to Unsupported number of bits for unsigned int: (2, 2, 2), trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif' mode='rb' closefd=True> 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif: no tiff reader managed to read the file. 318s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif with TiffIO due to cannot reshape array of size 2044 into shape (73,3), trying PIL 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif' mode='rb' closefd=True> 318s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif: no tiff reader managed to read the file. 318s WARNING:fabio.tifimage:Third dimension is the color 318s ok 318s INFO:memProf:Time: 0.449s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_LibTiffPic.test_all_images 318s test_invert (fabio.test.codecs.test_xsdimage.TestXSD.test_invert) 318s Tests that 2 matrixes are invert ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.edf.bz2') 318s INFO:fabio.utils.ExternalResources:Image XSDataImage.edf.bz2 successfully downloaded. 319s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.xml.bz2') 319s INFO:fabio.utils.ExternalResources:Image XSDataImage.xml.bz2 successfully downloaded. 319s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImageInv.xml.bz2') 319s INFO:fabio.utils.ExternalResources:Image XSDataImageInv.xml.bz2 successfully downloaded. 320s ok 320s INFO:memProf:Time: 1.708s RAM: 0.000 Mb fabio.test.codecs.test_xsdimage.TestXSD.test_invert 320s test_read (fabio.test.codecs.test_xsdimage.TestXSD.test_read) 320s Test reading of XSD images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.edf.bz2') 320s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.xml.bz2') 320s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImageInv.xml.bz2') 320s INFO:fabio.test.codecs.test_xsdimage:XSDataImage.xml 667.15 667.1489268499176 320s INFO:fabio.test.codecs.test_xsdimage:XSDataImageInv.xml 0.01 0.010599090552568758 320s ok 320s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.codecs.test_xsdimage.TestXSD.test_read 320s test_same (fabio.test.codecs.test_xsdimage.TestXSD.test_same) 320s test if an image is the same as the EDF equivalent ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.edf.bz2') 320s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.xml.bz2') 320s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImageInv.xml.bz2') 320s ok 320s INFO:memProf:Time: 0.005s RAM: 0.000 Mb fabio.test.codecs.test_xsdimage.TestXSD.test_same 320s test_memoryleak (fabio.test.codecs.test_raxisimage.TestRaxisImage.test_memoryleak) 320s This test takes a lot of time, so only in debug mode. ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mgzn-20hpt.img.bz2') 320s INFO:fabio.utils.ExternalResources:Image mgzn-20hpt.img.bz2 successfully downloaded. 320s ok 320s INFO:memProf:Time: 0.937s RAM: 0.000 Mb fabio.test.codecs.test_raxisimage.TestRaxisImage.test_memoryleak 320s test_read (fabio.test.codecs.test_raxisimage.TestRaxisImage.test_read) 320s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mgzn-20hpt.img.bz2') 321s ok 321s INFO:memProf:Time: 0.634s RAM: 0.000 Mb fabio.test.codecs.test_raxisimage.TestRaxisImage.test_read 321s test_read (fabio.test.codecs.test_pnmimage.TestPNM.test_read) 321s check we can read pnm images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('image0001.pgm.bz2') 321s INFO:fabio.utils.ExternalResources:Image image0001.pgm.bz2 successfully downloaded. 321s ok 321s INFO:memProf:Time: 0.059s RAM: 0.000 Mb fabio.test.codecs.test_pnmimage.TestPNM.test_read 321s test_write (fabio.test.codecs.test_pnmimage.TestPNM.test_write) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('image0001.pgm.bz2') 321s ok 321s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pnmimage.TestPNM.test_write 321s test_multidim (fabio.test.codecs.test_numpyimage.TestNumpy.test_multidim) ... ok 321s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_numpyimage.TestNumpy.test_multidim 321s test_read (fabio.test.codecs.test_numpyimage.TestNumpy.test_read) 321s check we can read pnm images ... ok 321s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_numpyimage.TestNumpy.test_read 321s test_write (fabio.test.codecs.test_numpyimage.TestNumpy.test_write) 321s check we can write numpy images ... ok 321s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_numpyimage.TestNumpy.test_write 321s test_frame (fabio.test.codecs.test_pilatusimage.TestPilatus.test_frame) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.bz2') 321s INFO:fabio.utils.ExternalResources:Image lysb_5mg-1.90s_SAXS.bz2 successfully downloaded. 322s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.gz') 322s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS') 323s ok 323s INFO:memProf:Time: 2.145s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus.test_frame 323s test_header (fabio.test.codecs.test_pilatusimage.TestPilatus.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.bz2') 323s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.gz') 323s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS') 323s ok 323s INFO:memProf:Time: 0.040s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus.test_header 323s test_read (fabio.test.codecs.test_pilatusimage.TestPilatus.test_read) 323s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.bz2') 323s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.gz') 323s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS') 323s ok 323s INFO:memProf:Time: 0.043s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus.test_read 323s test_header (fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif.bz2') 324s INFO:fabio.utils.ExternalResources:Image Pilatus1M.tif.bz2 successfully downloaded. 324s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 324s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif') 324s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 324s ok 324s INFO:memProf:Time: 0.420s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_header 324s test_read (fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_read) 324s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif.bz2') 324s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 324s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif') 324s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 324s ok 324s INFO:memProf:Time: 0.092s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_read 324s test_bug_479 (fabio.test.codecs.test_eigerimage.TestEiger.test_bug_479) ... WARNING:fabio.eigerimage:hdf5plugin is needed for bitshuffle-LZ4 compression, falling back on gzip (slower) 324s ok 324s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_bug_479 324s test_frames_abort_iteration (fabio.test.codecs.test_eigerimage.TestEiger.test_frames_abort_iteration) ... ok 324s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_frames_abort_iteration 324s test_frames_full_iteration (fabio.test.codecs.test_eigerimage.TestEiger.test_frames_full_iteration) ... ok 324s INFO:memProf:Time: 0.007s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_frames_full_iteration 324s test_frames_random_access (fabio.test.codecs.test_eigerimage.TestEiger.test_frames_random_access) ... ok 324s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_frames_random_access 324s test_open (fabio.test.codecs.test_eigerimage.TestEiger.test_open) 324s check we can read images from Eiger ... ok 324s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_open 324s test_read (fabio.test.codecs.test_eigerimage.TestEiger.test_read) 324s check we can read images from Eiger ... ok 324s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_read 324s test_write (fabio.test.codecs.test_eigerimage.TestEiger.test_write) ... WARNING:fabio.eigerimage:hdf5plugin is needed for bitshuffle-LZ4 compression, falling back on gzip (slower) 324s ok 324s INFO:memProf:Time: 0.010s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_write 324s test_iterate (fabio.test.codecs.test_hdf5image.TestHdf5.test_iterate) ... ok 324s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_iterate 324s test_next_frames (fabio.test.codecs.test_hdf5image.TestHdf5.test_next_frames) 324s check the legacy next API ... ok 324s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_next_frames 324s test_open (fabio.test.codecs.test_hdf5image.TestHdf5.test_open) 324s check we can read images from Eiger ... ok 324s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_open 324s test_read (fabio.test.codecs.test_hdf5image.TestHdf5.test_read) 324s check we can read images from Eiger ... ok 324s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_read 324s test_mask (fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_mask) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.f2d.bz2') 324s INFO:fabio.utils.ExternalResources:Image fit2d.f2d.bz2 successfully downloaded. 324s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 324s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.f2d.bz2') 324s INFO:fabio.utils.ExternalResources:Image Pilatus1M.f2d.bz2 successfully downloaded. 327s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.cbf.bz2') 327s INFO:fabio.utils.ExternalResources:Image Pilatus1M.cbf.bz2 successfully downloaded. 328s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.msk.bz2') 328s INFO:fabio.utils.ExternalResources:Image Pilatus1M.msk.bz2 successfully downloaded. 328s ok 328s INFO:memProf:Time: 3.584s RAM: 0.000 Mb fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_mask 328s test_match (fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_match) 328s test edf and msk are the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.f2d.bz2') 328s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 328s WARNING:fabio.TiffIO:TIFF file tag 270 contains non ASCII/UTF-8 characters. 328s ok 328s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_match 328s test_read (fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_read) 328s Check it reads a mask OK ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.f2d.bz2') 328s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 328s ok 328s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_read 328s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v2.SPE.bz2') 328s INFO:fabio.utils.ExternalResources:Image v2.SPE.bz2 successfully downloaded. 328s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v2_converted.SPE.bz2') 328s INFO:fabio.utils.ExternalResources:Image v2_converted.SPE.bz2 successfully downloaded. 328s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v3.spe.bz2') 328s INFO:fabio.utils.ExternalResources:Image v3.spe.bz2 successfully downloaded. 328s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v3_custom_roi.spe.bz2') 328s INFO:fabio.utils.ExternalResources:Image v3_custom_roi.spe.bz2 successfully downloaded. 328s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v3_2frames.spe.bz2') 328s INFO:fabio.utils.ExternalResources:Image v3_2frames.spe.bz2 successfully downloaded. 331s test_calibration (fabio.test.codecs.test_speimage.TestSpeImage.test_calibration) ... ok 331s INFO:memProf:Time: 0.020s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_calibration 331s test_center_wavelength (fabio.test.codecs.test_speimage.TestSpeImage.test_center_wavelength) ... ok 331s INFO:memProf:Time: 0.012s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_center_wavelength 331s test_detector (fabio.test.codecs.test_speimage.TestSpeImage.test_detector) ... ok 331s INFO:memProf:Time: 0.012s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_detector 331s test_exposure_time (fabio.test.codecs.test_speimage.TestSpeImage.test_exposure_time) ... ok 331s INFO:memProf:Time: 0.027s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_exposure_time 331s test_fabio_integration (fabio.test.codecs.test_speimage.TestSpeImage.test_fabio_integration) ... ok 331s INFO:memProf:Time: 0.168s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_fabio_integration 331s test_grating (fabio.test.codecs.test_speimage.TestSpeImage.test_grating) ... ok 331s INFO:memProf:Time: 0.013s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_grating 331s test_multiple_frames (fabio.test.codecs.test_speimage.TestSpeImage.test_multiple_frames) ... ok 331s INFO:memProf:Time: 0.029s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_multiple_frames 331s test_read_data (fabio.test.codecs.test_speimage.TestSpeImage.test_read_data) ... ok 331s INFO:memProf:Time: 0.012s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_read_data 331s test_reading_version2_spe (fabio.test.codecs.test_speimage.TestSpeImage.test_reading_version2_spe) ... ok 331s INFO:memProf:Time: 0.013s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_reading_version2_spe 332s test_roi (fabio.test.codecs.test_speimage.TestSpeImage.test_roi) ... ok 332s INFO:memProf:Time: 0.020s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_roi 332s test_time (fabio.test.codecs.test_speimage.TestSpeImage.test_time) ... ok 332s INFO:memProf:Time: 0.014s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_time 332s test_read_empty_file (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_empty_file) ... ok 332s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_empty_file 332s test_read_failing_file (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_failing_file) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 332s INFO:fabio.utils.ExternalResources:Image rand_uint8.jpg.bz2 successfully downloaded. 332s ok 332s INFO:memProf:Time: 0.015s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_failing_file 332s test_read_missing_file (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_missing_file) ... ok 332s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_missing_file 332s test_read_uint8 (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 332s ok 332s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_uint8 332s test_read_uint8 (fabio.test.codecs.test_jpegimage.TestJpegImageInsideFabio.test_read_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 332s ok 332s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImageInsideFabio.test_read_uint8 332s test_with_pil (fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_with_pil) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 332s ok 332s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_with_pil 332s test_without_pil (fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_without_pil) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 332s ok 332s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_without_pil 332s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_missing_file) ... ok 332s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_missing_file 332s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint16) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint16.jp2.bz2') 332s INFO:fabio.utils.ExternalResources:Image binned_data_uint16.jp2.bz2 successfully downloaded. 332s ok 332s INFO:memProf:Time: 0.023s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint16 332s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint8.jp2.bz2') 332s INFO:fabio.utils.ExternalResources:Image binned_data_uint8.jp2.bz2 successfully downloaded. 332s ok 332s INFO:memProf:Time: 0.048s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint8 332s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_wrong_format) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 332s ok 332s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_wrong_format 332s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_missing_file) ... ok 332s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_missing_file 332s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint16) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint16.jp2.bz2') 332s ok 332s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint16 332s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint8.jp2.bz2') 332s ok 332s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint8 332s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_wrong_format) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 332s ok 332s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_wrong_format 332s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_missing_file) ... skipped 'glymur is not available or too old' 332s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_missing_file 332s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint16) ... skipped 'glymur is not available or too old' 332s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint16 332s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint8) ... skipped 'glymur is not available or too old' 332s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint8 332s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_wrong_format) ... skipped 'glymur is not available or too old' 332s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_wrong_format 332s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_missing_file) ... ok 332s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_missing_file 332s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint16) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint16.jp2.bz2') 332s ok 332s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint16 332s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint8.jp2.bz2') 332s ok 332s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint8 332s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_wrong_format) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 332s ok 332s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_wrong_format 332s test_read (fabio.test.codecs.test_mpaimage.TestMpa.test_read) 332s Test the reading of multiwire images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mpa_test.mpa.bz2') 332s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.bz2 rb 332s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.bz2 rb 332s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.gz rb fabio. 332s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.gz rb fabio. 332s /tmp/fabio_testdata_ubuntu/GE_aSI_detector_image_1529.bz2 rb 332s /tmp/fabio_testdata_ubuntu/GE_aSI_detector_image_1529.gz rb fabio. 332s /tmp/fabio_testdata_ubuntu/corkcont2_H_0089.mccd.bz2 rb 332s /tmp/fabio_testdata_ubuntu/corkcont2_H_0089.mccd.gz rb fabio. 332s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.bz2 rb 332s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.gz rb fabio. 332s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.bz2 rb 332s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.gz rb fabio. 332s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.bz2 rb 332s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.gz rb fabio. 332s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.bz2 rb 332s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.gz rb fabio. 332s /tmp/fabio_testdata_ubuntu/oPPA_5grains_0001.tif.gz rb fabio. 332s /tmp/fabio_testdata_ubuntu/testmap1_0002.tif.gz rb fabio. 332s /tmp/fabio_testdata_ubuntu/testmap1_0002.tif.bz2 rb 332s /tmp/fabio_testdata_ubuntu/fit2d.tif.bz2 rb 332s /tmp/fabio_testdata_ubuntu/oPPA_5grains_0001.tif.bz2 rb 332s /tmp/fabio_testdata_ubuntu/pilatus2M.tif.bz2 rb 332s /tmp/fabio_testdata_ubuntu/indexed_color.tif.gz rb fabio. 332s /tmp/fabio_testdata_ubuntu/indexed_color.tif.bz2 rb 332s /tmp/fabio_testdata_ubuntu/indexed_color.tif.gz rb fabio. 332s /tmp/fabio_testdata_ubuntu/indexed_color.tif.bz2 rb 332s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.bz2 rb 332s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.gz rb fabio. 332s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.bz2 rb 332s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.gz rb fabio. 332s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.bz2 rb 332s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.gz rb fabio. 332s /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 rb 332s /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 rb 332s 0 332s 1 332s 2 332s 3 332s 4 332s 5 332s 6 332s 7 332s 8 332s 9 332s 10 332s 11 332s 12 332s 13 332s 14 332s 15 332s 16 332s 17 332s 18 332s 19 332s 20 332s 21 332s 22 332s 23 332s 24 332s 25 332s 26 332s 27 332s 28 332s 29 332s 30 332s 31 332s 32 332s 33 332s 34 332s 35 332s 36 332s 37 332s 38 332s 39 332s 40 332s 41 332s 42 332s 43 332s 44 332s 45 332s 46 332s 47 332s 48 332s 49 332s jpeg2kimage.PIL: 332s jpeg2kimage.PIL: 332s jpeg2kimage.PIL: 332s jpeg2kimage.PIL: 332s jpeg2kimage.PIL: 332s jpeg2kimage.PIL: 332s jpeg2kimage.PIL: 332s jpeg2kimage.PIL: 332s jpeg2kimage.PIL: 332s jpeg2kimage.PIL: 332s jpeg2kimage.PIL: 332s jpeg2kimage.PIL: INFO:fabio.utils.ExternalResources:Image mpa_test.mpa.bz2 successfully downloaded. 336s ok 336s INFO:memProf:Time: 4.912s RAM: 0.000 Mb fabio.test.codecs.test_mpaimage.TestMpa.test_read 336s test_read (fabio.test.codecs.test_dm3image.TestDm3Image.test_read) 336s check we can read dm3 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('ref_d20x_310mm.dm3.bz2') 337s INFO:fabio.utils.ExternalResources:Image ref_d20x_310mm.dm3.bz2 successfully downloaded. 342s ok 342s INFO:memProf:Time: 5.822s RAM: 0.000 Mb fabio.test.codecs.test_dm3image.TestDm3Image.test_read 342s test_read (fabio.test.codecs.test_mrcimage.TestMrc.test_read) 342s check we can read mrc images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.map.bz2') 342s INFO:fabio.utils.ExternalResources:Image EMD-3001.map.bz2 successfully downloaded. 342s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.mrc.bz2') 343s INFO:fabio.utils.ExternalResources:Image 0p67_5s_0000.mrc.bz2 successfully downloaded. 360s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.npy.bz2') 360s INFO:fabio.utils.ExternalResources:Image EMD-3001.npy.bz2 successfully downloaded. 360s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.npy.bz2') 360s INFO:fabio.utils.ExternalResources:Image 0p67_5s_0000.npy.bz2 successfully downloaded. 378s INFO:fabio.mrcimage:Expected 'MAP ', got INFO:fabio.mrcimage:Expected 'MAP ', got INFO:fabio.mrcimage:Expected 'MAP ', got ok 378s INFO:memProf:Time: 35.856s RAM: 0.000 Mb fabio.test.codecs.test_mrcimage.TestMrc.test_read 378s test_same (fabio.test.codecs.test_mrcimage.TestMrc.test_same) 378s see if we can read mrc images and if they are the same as the numpy dump ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.map.bz2') 378s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.mrc.bz2') 378s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.npy.bz2') 378s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.npy.bz2') 378s INFO:fabio.test.codecs.test_mrcimage:Comparing files EMD-3001.map and EMD-3001.npy 378s INFO:fabio.mrcimage:Expected 'MAP ', got INFO:fabio.test.codecs.test_mrcimage:Comparing files 0p67_5s_0000.mrc and 0p67_5s_0000.npy 378s ok 378s INFO:memProf:Time: 0.013s RAM: 0.000 Mb fabio.test.codecs.test_mrcimage.TestMrc.test_same 378s test_file_series (fabio.test.codecs.test_pixiimage.TestPixiImage.test_file_series) ... ok 378s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_file_series 378s test_frames_abort_iteration (fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_abort_iteration) ... ok 378s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_abort_iteration 378s test_frames_full_iteration (fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_full_iteration) ... ok 378s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_full_iteration 378s test_frames_random_access (fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_random_access) ... ok 378s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_random_access 378s test_multi_frame (fabio.test.codecs.test_pixiimage.TestPixiImage.test_multi_frame) ... ok 378s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_multi_frame 378s test_single_frame (fabio.test.codecs.test_pixiimage.TestPixiImage.test_single_frame) ... ok 378s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_single_frame 378s test_data (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_data) ... INFO:fabio.esperantoimage:Esperanto accepts only integer data, rounding 378s INFO:fabio.esperantoimage:Padding image to be square, multiple of 4 and of size between 256 and 4096 378s ok 378s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_data 378s test_header (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('sucrose_1s__1_1.esperanto.bz2') 378s INFO:fabio.utils.ExternalResources:Image sucrose_1s__1_1.esperanto.bz2 successfully downloaded. 380s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio__mpk0_6p_ubuntu/4bytes_long.esperanto 380s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio__mpk0_6p_ubuntu/agi_bitfield.esperanto 382s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.esperanto.bz2') 382s INFO:fabio.utils.ExternalResources:Image reference.esperanto.bz2 successfully downloaded. 382s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio__mpk0_6p_ubuntu/4bytes_long.esperanto 382s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio__mpk0_6p_ubuntu/agi_bitfield.esperanto 382s ok 382s INFO:memProf:Time: 3.676s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_header 382s test_read (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_read) 382s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('sucrose_1s__1_1.esperanto.bz2') 383s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.esperanto.bz2') 384s ok 384s INFO:memProf:Time: 1.576s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_read 384s test_values (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_values) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.esperanto.bz2') 384s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.npy.bz2') 384s INFO:fabio.utils.ExternalResources:Image reference.npy.bz2 successfully downloaded. 384s ok 384s INFO:memProf:Time: 0.308s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_values 384s test_frames_abort_iteration (fabio.test.codecs.test_limaimage.TestLima.test_frames_abort_iteration) ... ok 384s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_frames_abort_iteration 384s test_frames_full_iteration (fabio.test.codecs.test_limaimage.TestLima.test_frames_full_iteration) ... ok 384s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_frames_full_iteration 384s test_frames_random_access (fabio.test.codecs.test_limaimage.TestLima.test_frames_random_access) ... ok 384s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_frames_random_access 384s test_identify (fabio.test.codecs.test_limaimage.TestLima.test_identify) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('output_sparse_0_00000.h5') 384s INFO:fabio.utils.ExternalResources:Image output_sparse_0_00000.h5.bz2 successfully downloaded. 386s ok 386s INFO:memProf:Time: 2.184s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_identify 386s test_open (fabio.test.codecs.test_limaimage.TestLima.test_open) 386s test_open check we can read images from Lima ... ok 386s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_open 386s test_read (fabio.test.codecs.test_limaimage.TestLima.test_read) 386s test_read check we can read images from Lima ... ok 386s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_read 386s test_write (fabio.test.codecs.test_limaimage.TestLima.test_write) ... WARNING:fabio.limaimage:hdf5plugin is needed for bitshuffle-LZ4 compression, falling back on gzip (slower) 386s ok 386s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_write 386s test_read (fabio.test.codecs.test_hipicimage.TestHiPiCImage.test_read) 386s check we can read dm3 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Radiograph_SP8_BL47XU_HiPicimage.img.bz2') 386s INFO:fabio.utils.ExternalResources:Image Radiograph_SP8_BL47XU_HiPicimage.img.bz2 successfully downloaded. 389s ok 389s INFO:memProf:Time: 2.630s RAM: 0.000 Mb fabio.test.codecs.test_hipicimage.TestHiPiCImage.test_read 389s test_read (fabio.test.codecs.test_binaryimage.TestBinaryImage.test_read) 389s check we can read images from Eiger ... ok 389s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_binaryimage.TestBinaryImage.test_read 389s test_write (fabio.test.codecs.test_binaryimage.TestBinaryImage.test_write) ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_binaryimage.TestBinaryImage.test_write 389s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0001.ccd') 389s INFO:fabio.utils.ExternalResources:Image scan0001.ccd.bz2 successfully downloaded. 389s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0005.ccd') 389s INFO:fabio.utils.ExternalResources:Image scan0005.ccd.bz2 successfully downloaded. 389s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0050.ccd') 389s INFO:fabio.utils.ExternalResources:Image scan0050.ccd.bz2 successfully downloaded. 389s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0059.ccd') 389s INFO:fabio.utils.ExternalResources:Image scan0059.ccd.bz2 successfully downloaded. 389s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0066.ccd') 389s INFO:fabio.utils.ExternalResources:Image scan0066.ccd.bz2 successfully downloaded. 389s test_parse (fabio.test.codecs.test_xcaliburimage.TestCcdCharacteristiscs.test_parse) ... ok 389s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_xcaliburimage.TestCcdCharacteristiscs.test_parse 389s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.cbf') 389s test_decomposition (fabio.test.codecs.test_xcaliburimage.testXcalibureImage.test_decomposition) ... WARNING:fabio.test.codecs.test_xcaliburimage:PyFAI not available: only a coarse description of the mask is provided 389s WARNING:fabio.xcaliburimage:PyFAI not available: only a coarse description of the mask is provided 389s ok 389s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.codecs.test_xcaliburimage.testXcalibureImage.test_decomposition 389s test_compress_decode_field_overflow (fabio.test.test_agi_bitfield.TestUtil.test_compress_decode_field_overflow) ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_compress_decode_field_overflow 389s test_compress_decompress_field_small (fabio.test.test_agi_bitfield.TestUtil.test_compress_decompress_field_small) ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_compress_decompress_field_small 389s test_full_compress_decompress_field (fabio.test.test_agi_bitfield.TestUtil.test_full_compress_decompress_field) ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_full_compress_decompress_field 389s test_get_fieldsize (fabio.test.test_agi_bitfield.TestUtil.test_get_fieldsize) ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_get_fieldsize 389s test_mask_conv (fabio.test.test_agi_bitfield.TestUtil.test_mask_conv) ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_mask_conv 389s test_compress_row_small (fabio.test.test_agi_bitfield.TestRow.test_compress_row_small) ... ok 389s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestRow.test_compress_row_small 389s test_compress_row_zero (fabio.test.test_agi_bitfield.TestRow.test_compress_row_zero) ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestRow.test_compress_row_zero 389s test_full_rand (fabio.test.test_agi_bitfield.TestCompression.test_full_rand) ... ok 389s INFO:memProf:Time: 0.068s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestCompression.test_full_rand 389s test_cython (fabio.test.test_densification.TestDensification.test_cython) ... 389s /tmp/fabio__mpk0_6p_ubuntu/lima3d.h5 389s /tmp/fabio__mpk0_6p_ubuntu/binary.npy 389s speed-up: 25.64297694239734 389s ##### 0 389s ##### 1 389s ##### 2 389s ##### 3 389s ##### 4 389s ##### 5 389s ##### 6 389s ##### 7 389s aaa [ ] 7% toto aaa [■■■■■■ ] 70% toto aaa [■■■■■■■■■■] 132% toto ok 389s INFO:memProf:Time: 0.070s RAM: 0.000 Mb fabio.test.test_densification.TestDensification.test_cython 389s test_rng_normal (fabio.test.test_densification.TestDensification.test_rng_normal) ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_densification.TestDensification.test_rng_normal 389s test_rng_uniform (fabio.test.test_densification.TestDensification.test_rng_uniform) ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_densification.TestDensification.test_rng_uniform 389s setUpClass (fabio.test.test_io_limits.TestEdf) ... skipped 'test requires debug level logging' 389s setUpClass (fabio.test.test_io_limits.TestTiff) ... skipped 'test requires debug level logging' 389s test_coverage (fabio.test.test_utils_cli.TestUtilShell.test_coverage) 389s test function coverage ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_utils_cli.TestUtilShell.test_coverage 389s test_expand_args (fabio.test.test_utils_cli.TestUtilShell.test_expand_args) ... ok 389s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_utils_cli.TestUtilShell.test_expand_args 389s 389s ---------------------------------------------------------------------- 389s Ran 356 tests in 263.297s 389s 389s OK (skipped=7) 389s Testing with python3.13: 389s WARNING:run_tests:Test fabio 2024.4.0 from /usr/lib/python3/dist-packages/fabio 389s test_iter_abort_iteration (fabio.test.test_fabio_image.TestFabioImage.test_iter_abort_iteration) ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestFabioImage.test_iter_abort_iteration 389s testcopy (fabio.test.test_fabio_image.Test50000.testcopy) 389s test the copy statement ... ok 389s INFO:memProf:Time: 0.007s RAM: 6.144 Mb fabio.test.test_fabio_image.Test50000.testcopy 389s testgetmax (fabio.test.test_fabio_image.Test50000.testgetmax) 389s check max ... ok 389s INFO:memProf:Time: 0.003s RAM: 0.868 Mb fabio.test.test_fabio_image.Test50000.testgetmax 389s testgetmean (fabio.test.test_fabio_image.Test50000.testgetmean) 389s check mean ... ok 389s INFO:memProf:Time: 0.004s RAM: 0.180 Mb fabio.test.test_fabio_image.Test50000.testgetmean 389s testgetmin (fabio.test.test_fabio_image.Test50000.testgetmin) 389s check min ... ok 389s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.test_fabio_image.Test50000.testgetmin 389s testgetstddev (fabio.test.test_fabio_image.Test50000.testgetstddev) 389s check stddev ... ok 389s INFO:memProf:Time: 0.007s RAM: 8.356 Mb fabio.test.test_fabio_image.Test50000.testgetstddev 389s testRebin (fabio.test.test_fabio_image.TestSlices.testRebin) 389s Test the rebin method ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testRebin 389s testgetmax (fabio.test.test_fabio_image.TestSlices.testgetmax) 389s check max ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testgetmax 389s testgetmin (fabio.test.test_fabio_image.TestSlices.testgetmin) 389s check min ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testgetmin 389s testintegratearea (fabio.test.test_fabio_image.TestSlices.testintegratearea) 389s check integrations ... ok 389s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testintegratearea 389s testFlat (fabio.test.test_fabio_image.TestOpen.testFlat) 389s no compression ... ok 389s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.testFlat 389s test_badtype (fabio.test.test_fabio_image.TestOpen.test_badtype) ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.test_badtype 389s test_pathlib (fabio.test.test_fabio_image.TestOpen.test_pathlib) ... ok 389s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.test_pathlib 389s testbz2 (fabio.test.test_fabio_image.TestOpen.testbz2) 389s bzipped ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.testbz2 389s testgz (fabio.test.test_fabio_image.TestOpen.testgz) 389s gzipped ... ok 389s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.testgz 389s testpil (fabio.test.test_fabio_image.TestPilImage.testpil) ... WARNING:fabio.DEPRECATION:Function toPIL16 is deprecated since fabio version 0.9. Reason: Not maintained. Use 'fabio.utils.pilutils.create_pil_16' instead. 389s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 209, in testpil 389s pim = img.toPIL16() 389s ok 389s INFO:memProf:Time: 0.040s RAM: 0.000 Mb fabio.test.test_fabio_image.TestPilImage.testpil 389s testpil (fabio.test.test_fabio_image.TestPilImage2.testpil) ... WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py:232: RuntimeWarning: invalid value encountered in cast 389s return (numpy.random.random(shape) * sys.maxsize / 10).astype(typ) 389s 389s ok 389s INFO:memProf:Time: 0.038s RAM: 0.000 Mb fabio.test.test_fabio_image.TestPilImage2.testpil 389s testpil (fabio.test.test_fabio_image.TestPilImage3.testpil) ... WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py:240: RuntimeWarning: invalid value encountered in cast 389s return ((numpy.random.random(shape) - 0.5) * sys.maxsize / 10).astype(typ) 389s 390s ok 390s INFO:memProf:Time: 0.040s RAM: 0.000 Mb fabio.test.test_fabio_image.TestPilImage3.testpil 390s test_cleanup_pilimage_cache (fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_cleanup_pilimage_cache) ... WARNING:fabio.DEPRECATION:Function pilimage is deprecated. Reason: Setting pilimage not supported. This attrbute is not cached anymore. 390s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 257, in test_cleanup_pilimage_cache 390s image.pilimage = None 390s ok 390s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_cleanup_pilimage_cache 390s test_patch_dim (fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_patch_dim) ... WARNING:fabio.DEPRECATION:Function dim2 is deprecated. Reason: dim2 should not be updated. 390s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 249, in test_patch_dim 390s image.dim2, image.dim1 = data.shape 390s WARNING:fabio.DEPRECATION:Function dim1 is deprecated. Reason: dim1 should not be updated. 390s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 249, in test_patch_dim 390s image.dim2, image.dim1 = data.shape 390s ok 390s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_patch_dim 390s test_many_cases (fabio.test.test_filenames.TestFilenames.test_many_cases) 390s loop over CASES ... ok 390s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenames.test_many_cases 390s test_more_cases (fabio.test.test_filenames.TestFilenames.test_more_cases) ... ok 390s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenames.test_more_cases 390s test_more_cases_jump (fabio.test.test_filenames.TestFilenames.test_more_cases_jump) ... ok 390s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenames.test_more_cases_jump 390s test_FileNameObject_can_iterate (fabio.test.test_filenames.TestFilenameObjects.test_FileNameObject_can_iterate) 390s Regression test for Fable ... ok 390s INFO:memProf:Time: 0.005s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenameObjects.test_FileNameObject_can_iterate 390s test_files_are_being_opened (fabio.test.test_filenames.TestFilenameObjects.test_files_are_being_opened) 390s Regression test for Fable ... ok 390s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenameObjects.test_files_are_being_opened 390s testfirst (fabio.test.test_file_series.TestRandomSeries.testfirst) 390s check first ... ok 390s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestRandomSeries.testfirst 390s testjump (fabio.test.test_file_series.TestRandomSeries.testjump) 390s check jump ... ok 390s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestRandomSeries.testjump 390s testlast (fabio.test.test_file_series.TestRandomSeries.testlast) 390s check first ... ok 390s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestRandomSeries.testlast 390s testfirst (fabio.test.test_file_series.TestEdfNumbered.testfirst) 390s first in series ... ok 390s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testfirst 390s testlast (fabio.test.test_file_series.TestEdfNumbered.testlast) 390s last in series ... ok 390s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testlast 390s testlen (fabio.test.test_file_series.TestEdfNumbered.testlen) 390s check len ... ok 390s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testlen 390s testnext (fabio.test.test_file_series.TestEdfNumbered.testnext) 390s check all in order ... ok 390s INFO:memProf:Time: 0.016s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testnext 390s testnextjump (fabio.test.test_file_series.TestEdfNumbered.testnextjump) 390s check current ... ok 390s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testnextjump 390s testprevious (fabio.test.test_file_series.TestEdfNumbered.testprevious) 390s check all in order ... ok 390s INFO:memProf:Time: 0.015s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testprevious 390s testprevjump (fabio.test.test_file_series.TestEdfNumbered.testprevjump) 390s check current ... ok 390s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testprevjump 390s test_anyframe_frames (fabio.test.test_file_series.TestFileSeries.test_anyframe_frames) ... ok 390s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_frames 390s test_anyframe_getframe (fabio.test.test_file_series.TestFileSeries.test_anyframe_getframe) ... ok 390s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_getframe 390s test_anyframe_getframes (fabio.test.test_file_series.TestFileSeries.test_anyframe_getframes) ... ok 390s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_getframes 390s test_anyframe_nframes (fabio.test.test_file_series.TestFileSeries.test_anyframe_nframes) ... ok 390s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_nframes 390s test_anyframe_nofiles (fabio.test.test_file_series.TestFileSeries.test_anyframe_nofiles) ... ok 390s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_nofiles 390s test_filename_generator (fabio.test.test_file_series.TestFileSeries.test_filename_generator) ... ok 390s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_filename_generator 390s test_filename_iterator (fabio.test.test_file_series.TestFileSeries.test_filename_iterator) ... ok 390s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_filename_iterator 390s test_multiframe_frames (fabio.test.test_file_series.TestFileSeries.test_multiframe_frames) ... ok 390s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_frames 390s test_multiframe_getframe (fabio.test.test_file_series.TestFileSeries.test_multiframe_getframe) ... ok 390s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_getframe 390s test_multiframe_nframes (fabio.test.test_file_series.TestFileSeries.test_multiframe_nframes) ... ok 390s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_nframes 390s test_multiframe_nofiles (fabio.test.test_file_series.TestFileSeries.test_multiframe_nofiles) ... ok 390s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_nofiles 390s test_singleframe_frames (fabio.test.test_file_series.TestFileSeries.test_singleframe_frames) ... ok 390s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_frames 390s test_singleframe_getframe (fabio.test.test_file_series.TestFileSeries.test_singleframe_getframe) ... ok 390s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_getframe 390s test_singleframe_nframes (fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes) ... ok 390s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes 390s test_singleframe_nframes2 (fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes2) ... ok 390s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes2 390s test_singleframe_nframes3 (fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes3) ... ok 390s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes3 390s test_singleframe_nofiles (fabio.test.test_file_series.TestFileSeries.test_singleframe_nofiles) ... ok 390s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nofiles 390s test_with_filename_series (fabio.test.test_file_series.TestFileSeries.test_with_filename_series) ... ok 390s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_with_filename_series 390s test_with_numbered_file_series (fabio.test.test_file_series.TestFileSeries.test_with_numbered_file_series) ... ok 390s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_with_numbered_file_series 390s test_next1 (fabio.test.test_filename_steps.TestNext.test_next1) ... ok 390s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filename_steps.TestNext.test_next1 390s test_prev1 (fabio.test.test_filename_steps.TestPrev.test_prev1) ... ok 390s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filename_steps.TestPrev.test_prev1 390s test_jump1 (fabio.test.test_filename_steps.TestJump.test_jump1) ... ok 390s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filename_steps.TestJump.test_jump1 390s testheader (fabio.test.test_header_not_singleton.TestHeaderNotSingleton.testheader) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 390s ok 390s INFO:memProf:Time: 0.046s RAM: 43.136 Mb fabio.test.test_header_not_singleton.TestHeaderNotSingleton.testheader 390s testcase (fabio.test.test_open_header.Test1.testcase) 390s check openheader can read edf headers ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675_header_only.edf.bz2') 390s ok 390s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_open_header.Test1.testcase 390s testAdsc (fabio.test.test_open_image.TestOpenDtrek.testAdsc) 390s openimage opening adsc ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 390s ok 390s INFO:memProf:Time: 0.078s RAM: 147.528 Mb fabio.test.test_open_image.TestOpenDtrek.testAdsc 390s testAdscBz2 (fabio.test.test_open_image.TestOpenDtrek.testAdscBz2) 390s openimage opening adsc bzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 391s ok 391s INFO:memProf:Time: 1.621s RAM: 5.148 Mb fabio.test.test_open_image.TestOpenDtrek.testAdscBz2 391s testAdscGz (fabio.test.test_open_image.TestOpenDtrek.testAdscGz) 391s openimage opening adsc gzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.gz') 392s ok 392s INFO:memProf:Time: 0.252s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenDtrek.testAdscGz 392s testBruker (fabio.test.test_open_image.TestOpenBruker.testBruker) 392s openimage opening bruker ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 392s ok 392s INFO:memProf:Time: 0.005s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenBruker.testBruker 392s testBrukerBz2 (fabio.test.test_open_image.TestOpenBruker.testBrukerBz2) 392s openimage opening bruker bzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 392s ok 392s INFO:memProf:Time: 0.058s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenBruker.testBrukerBz2 392s testBrukerGz (fabio.test.test_open_image.TestOpenBruker.testBrukerGz) 392s openimage opening bruker gzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.gz') 392s ok 392s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenBruker.testBrukerGz 392s testEdf (fabio.test.test_open_image.TestOpenEdf.testEdf) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 392s ok 392s INFO:memProf:Time: 0.025s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenEdf.testEdf 392s testEdfBz2 (fabio.test.test_open_image.TestOpenEdf.testEdfBz2) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 393s ok 393s INFO:memProf:Time: 1.715s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenEdf.testEdfBz2 393s testEdfGz (fabio.test.test_open_image.TestOpenEdf.testEdfGz) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.gz') 394s ok 394s INFO:memProf:Time: 0.225s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenEdf.testEdfGz 394s testMask (fabio.test.test_open_image.TestOpenMask.testMask) 394s openimage opening fit2d msk ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 394s ok 394s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMask.testMask 394s testMaskBz2 (fabio.test.test_open_image.TestOpenMask.testMaskBz2) 394s openimage opening fit2d msk bzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 394s ok 394s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMask.testMaskBz2 394s testMaskGz (fabio.test.test_open_image.TestOpenMask.testMaskGz) 394s openimage opening fit2d msk gzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.gz') 394s ok 394s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMask.testMaskGz 394s testMccd (fabio.test.test_open_image.TestOpenMccd.testMccd) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.bz2') 394s ok 394s INFO:memProf:Time: 0.005s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMccd.testMccd 394s testMccdBz2 (fabio.test.test_open_image.TestOpenMccd.testMccdBz2) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.bz2') 394s ok 394s INFO:memProf:Time: 0.179s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMccd.testMccdBz2 394s testMccdGz (fabio.test.test_open_image.TestOpenMccd.testMccdGz) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.gz') 394s ok 394s INFO:memProf:Time: 0.023s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMccd.testMccdGz 394s testOxd (fabio.test.test_open_image.TestOpenOxd.testOxd) 394s openimage opening adsc ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 394s ok 394s INFO:memProf:Time: 0.008s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenOxd.testOxd 394s testOxdUnc (fabio.test.test_open_image.TestOpenOxd.testOxdUnc) 394s openimage opening adsc ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 394s ok 394s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenOxd.testOxdUnc 394s testComp (fabio.test.test_compression.TestByteOffset.testComp) ... ok 394s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_compression.TestByteOffset.testComp 394s testSC (fabio.test.test_compression.TestByteOffset.testSC) 394s test that datasets are unchanged after various compression/decompressions ... ok 394s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_compression.TestByteOffset.testSC 394s test_from_time (fabio.test.test_nexus.TestNexus.test_from_time) ... ok 394s INFO:memProf:Time: 0.007s RAM: 0.000 Mb fabio.test.test_nexus.TestNexus.test_from_time 394s test_nexus (fabio.test.test_nexus.TestNexus.test_nexus) 394s Test creation of Nexus files ... ok 394s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.test_nexus.TestNexus.test_nexus 394s testDefaultOption (fabio.test.test_fabio_convert.TestFabioConvert.testDefaultOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.13 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -F=msk -o=output 394s INFO:fabio.test.test_fabio_convert:Return code: 0 394s ok 394s INFO:memProf:Time: 0.208s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testDefaultOption 394s testForceOption (fabio.test.test_fabio_convert.TestFabioConvert.testForceOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.13 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -f -F=msk -o=output 394s INFO:fabio.test.test_fabio_convert:Return code: 0 394s ok 394s INFO:memProf:Time: 0.214s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testForceOption 394s testFullFormatName (fabio.test.test_fabio_convert.TestFabioConvert.testFullFormatName) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.13 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.* -F=numpyimage -o=output 395s INFO:fabio.test.test_fabio_convert:Return code: 0 395s ok 395s INFO:memProf:Time: 0.208s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testFullFormatName 395s testInteractiveOption (fabio.test.test_fabio_convert.TestFabioConvert.testInteractiveOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.13 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -n -i -F=msk -o=output 395s INFO:fabio.test.test_fabio_convert:Return code: 0 395s ok 395s INFO:memProf:Time: 0.207s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testInteractiveOption 395s testNoClobberOption (fabio.test.test_fabio_convert.TestFabioConvert.testNoClobberOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.13 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -n -F=msk -o=output 395s INFO:fabio.test.test_fabio_convert:Return code: 0 395s ok 395s INFO:memProf:Time: 0.204s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testNoClobberOption 395s testRemoveDestinationOption (fabio.test.test_fabio_convert.TestFabioConvert.testRemoveDestinationOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.13 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf --remove-destination -F=msk -o=output 395s INFO:fabio.test.test_fabio_convert:Return code: 0 395s ok 395s INFO:memProf:Time: 0.224s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testRemoveDestinationOption 395s testSingleFile (fabio.test.test_fabio_convert.TestFabioConvert.testSingleFile) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.13 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.edf -o=output/03.msk 395s INFO:fabio.test.test_fabio_convert:Return code: 0 395s ok 395s INFO:memProf:Time: 0.240s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testSingleFile 395s testSingleFileToDir (fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileToDir) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.13 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.edf -F=msk -o=output 396s INFO:fabio.test.test_fabio_convert:Return code: 0 396s ok 396s INFO:memProf:Time: 0.216s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileToDir 396s testSingleFileWithWildcardToDir (fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileWithWildcardToDir) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.13 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.* -F=msk -o=output 396s INFO:fabio.test.test_fabio_convert:Return code: 0 396s ok 396s INFO:memProf:Time: 0.215s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileWithWildcardToDir 396s testUpdateOption (fabio.test.test_fabio_convert.TestFabioConvert.testUpdateOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.13 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf --update -F=msk -o=output 396s INFO:fabio.test.test_fabio_convert:Return code: 0 396s ok 396s INFO:memProf:Time: 0.219s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testUpdateOption 396s test_missing_file (fabio.test.test_failing_files.TestFailingFiles.test_missing_file) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_missing_file 396s test_wrong_dm3 (fabio.test.test_failing_files.TestFailingFiles.test_wrong_dm3) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_dm3 396s test_wrong_edf (fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf 396s test_wrong_edf2 (fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf2) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf2 396s test_wrong_format (fabio.test.test_failing_files.TestFailingFiles.test_wrong_format) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_format 396s test_wrong_msk (fabio.test.test_failing_files.TestFailingFiles.test_wrong_msk) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_msk 396s test_wrong_numpy (fabio.test.test_failing_files.TestFailingFiles.test_wrong_numpy) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_numpy 396s test_annotation (fabio.test.test_formats.TestRegistration.test_annotation) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_annotation 396s test_deprecated_fabioimage_factory (fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory) 396s Check that it is still working ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory 396s test_deprecated_fabioimage_factory_missing_format (fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory_missing_format) 396s Check that it is still working ... ok 396s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory_missing_format 396s test_fabio_factory (fabio.test.test_formats.TestRegistration.test_fabio_factory) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabio_factory 396s test_fabio_factory_missing_format (fabio.test.test_formats.TestRegistration.test_fabio_factory_missing_format) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabio_factory_missing_format 396s test_fabioformats_factory (fabio.test.test_formats.TestRegistration.test_fabioformats_factory) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabioformats_factory 396s test_fabioformats_factory_missing_format (fabio.test.test_formats.TestRegistration.test_fabioformats_factory_missing_format) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabioformats_factory_missing_format 396s test_function (fabio.test.test_formats.TestRegistration.test_function) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_function 396s test_not_existing (fabio.test.test_formats.TestRegistration.test_not_existing) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_not_existing 396s test_edf_to_tiff (fabio.test.test_image_convert.TestImageConvert.test_edf_to_tiff) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.edf') 396s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/face.edf (frame 0) misses mandatory keys: SIZE 396s ok 396s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_image_convert.TestImageConvert.test_edf_to_tiff 396s test_append (fabio.test.test_tiffio.TestTiffIO.test_append) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_tiffio.TestTiffIO.test_append 396s test_read (fabio.test.test_tiffio.TestTiffIO.test_read) ... INFO:fabio.test.test_tiffio:nRows = 100 396s INFO:fabio.test.test_tiffio:nColumns = 100 396s INFO:fabio.test.test_tiffio:nBits = 16 396s INFO:fabio.test.test_tiffio:compression = False 396s INFO:fabio.test.test_tiffio:compression_type = 1 396s INFO:fabio.test.test_tiffio:imageDescription = Title=1st 396s 396s INFO:fabio.test.test_tiffio:stripOffsets = [168] 396s INFO:fabio.test.test_tiffio:rowsPerStrip = 100 396s INFO:fabio.test.test_tiffio:stripByteCounts = [20000] 396s INFO:fabio.test.test_tiffio:software = PyMca.TiffIO 396s INFO:fabio.test.test_tiffio:date = Unknown Date 396s INFO:fabio.test.test_tiffio:sampleFormat = 1 396s INFO:fabio.test.test_tiffio:photometricInterpretation = 1 396s INFO:fabio.test.test_tiffio:info = {'Title': '1st'} 396s INFO:fabio.test.test_tiffio:data [0, 0:10] = [0 1 2 3 4 5 6 7 8 9] 396s ok 396s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_tiffio.TestTiffIO.test_read 396s test_write (fabio.test.test_tiffio.TestTiffIO.test_write) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_tiffio.TestTiffIO.test_write 396s test_single_frame_iterator (fabio.test.test_frames.TestFabioImage.test_single_frame_iterator) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestFabioImage.test_single_frame_iterator 396s test_content (fabio.test.test_frames.TestVirtualEdf.test_content) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_content 396s test_frames_abort_iteration (fabio.test.test_frames.TestVirtualEdf.test_frames_abort_iteration) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_frames_abort_iteration 396s test_frames_full_iteration (fabio.test.test_frames.TestVirtualEdf.test_frames_full_iteration) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_frames_full_iteration 396s test_frames_random_access (fabio.test.test_frames.TestVirtualEdf.test_frames_random_access) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_frames_random_access 396s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 396s test_content (fabio.test.test_frames.TestEdf.test_content) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_content 396s test_frames_abort_iteration (fabio.test.test_frames.TestEdf.test_frames_abort_iteration) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_frames_abort_iteration 396s test_frames_full_iteration (fabio.test.test_frames.TestEdf.test_frames_full_iteration) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_frames_full_iteration 396s test_frames_random_access (fabio.test.test_frames.TestEdf.test_frames_random_access) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_frames_random_access 396s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.tif.bz2') 396s test_content (fabio.test.test_frames.TestTiff.test_content) ... ok 396s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_content 396s test_frames_abort_iteration (fabio.test.test_frames.TestTiff.test_frames_abort_iteration) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_frames_abort_iteration 396s test_frames_full_iteration (fabio.test.test_frames.TestTiff.test_frames_full_iteration) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_frames_full_iteration 396s test_frames_random_access (fabio.test.test_frames.TestTiff.test_frames_random_access) ... ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_frames_random_access 396s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.tif.bz2') 396s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 396s test_frames_abort_iteration (fabio.test.test_frames.TestFileSeries.test_frames_abort_iteration) ... ok 396s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_frames.TestFileSeries.test_frames_abort_iteration 396s test_frames_full_iteration (fabio.test.test_frames.TestFileSeries.test_frames_full_iteration) ... ok 396s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.test_frames.TestFileSeries.test_frames_full_iteration 396s test_frames_random_access (fabio.test.test_frames.TestFileSeries.test_frames_random_access) ... ok 396s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_frames.TestFileSeries.test_frames_random_access 396s test_open (fabio.test.test_fabio.TestFabio.test_open) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 396s ok 396s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open 396s test_open_bytesio (fabio.test.test_fabio.TestFabio.test_open_bytesio) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 396s ok 396s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_bytesio 396s test_open_fabio_bytesio (fabio.test.test_fabio.TestFabio.test_open_fabio_bytesio) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 396s ok 396s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_fabio_bytesio 396s test_open_series (fabio.test.test_fabio.TestFabio.test_open_series) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 396s ok 396s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_series 396s test_open_series_first_filename (fabio.test.test_fabio.TestFabio.test_open_series_first_filename) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 396s ok 396s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_series_first_filename 396s test_open_series_with (fabio.test.test_fabio.TestFabio.test_open_series_with) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 396s ok 396s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_series_with 396s test_open_with (fabio.test.test_fabio.TestFabio.test_open_with) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 396s ok 396s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_with 396s test_getstats (fabio.test.codecs.test_edfimage.TestFlatEdfs.test_getstats) 396s test statistics ... INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 396s ok 396s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestFlatEdfs.test_getstats 396s test_headers (fabio.test.codecs.test_edfimage.TestFlatEdfs.test_headers) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 396s ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestFlatEdfs.test_headers 396s test_read (fabio.test.codecs.test_edfimage.TestFlatEdfs.test_read) 396s check readable ... INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 396s ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestFlatEdfs.test_read 396s test_getstats (fabio.test.codecs.test_edfimage.TestBzipEdf.test_getstats) 396s test statistics ... INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 396s ok 396s INFO:memProf:Time: 0.070s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBzipEdf.test_getstats 396s test_headers (fabio.test.codecs.test_edfimage.TestBzipEdf.test_headers) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 396s ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBzipEdf.test_headers 396s test_read (fabio.test.codecs.test_edfimage.TestBzipEdf.test_read) 396s check readable ... INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 396s ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBzipEdf.test_read 396s test_getstats (fabio.test.codecs.test_edfimage.TestGzipEdf.test_getstats) 396s test statistics ... INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 396s ok 396s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestGzipEdf.test_getstats 396s test_headers (fabio.test.codecs.test_edfimage.TestGzipEdf.test_headers) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 396s ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestGzipEdf.test_headers 396s test_read (fabio.test.codecs.test_edfimage.TestGzipEdf.test_read) 396s check readable ... INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 396s ok 396s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestGzipEdf.test_read 396s test_read (fabio.test.codecs.test_edfimage.TestEdfs.test_read) 396s check we can read these images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 396s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('id13_badPadding.edf.bz2') 396s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf Mean: exp=1504.29, obt=1504.291387796402 396s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf StdDev: exp=217.61, obt=217.60628547694915 397s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.bz2 Mean: exp=1504.29, obt=1504.291387796402 397s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.bz2 StdDev: exp=217.61, obt=217.60628547694915 397s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.gz Mean: exp=1504.29, obt=1504.291387796402 397s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.gz StdDev: exp=217.61, obt=217.60628547694915 397s INFO:fabio.test.codecs.test_edfimage:id13_badPadding.edf Mean: exp=275.62, obt=275.6165885925293 397s INFO:fabio.test.codecs.test_edfimage:id13_badPadding.edf StdDev: exp=583.44, obt=583.4356660155632 397s ok 397s INFO:memProf:Time: 1.006s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfs.test_read 397s test_rebin (fabio.test.codecs.test_edfimage.TestEdfs.test_rebin) 397s test the rebin of edfdata ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 397s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('id13_badPadding.edf.bz2') 397s ok 397s INFO:memProf:Time: 0.017s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfs.test_rebin 397s test_read (fabio.test.codecs.test_edfimage.TestEdfCompressedData.test_read) 397s check we can read these images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfGzip_U16.edf.bz2') 397s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfCompressed_U16.edf.bz2') 397s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfUncompressed_U16.edf.bz2') 397s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 397s INFO:fabio.edfimage:Data stream is padded : 8389062 > required 8388608 bytes 397s ok 397s INFO:memProf:Time: 0.171s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfCompressedData.test_read 397s test_getFrame_mono (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_mono) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 397s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 397s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 397s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 397s ok 397s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_mono 397s test_getFrame_multi (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_multi) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 397s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 397s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 397s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 397s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 397s ok 397s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_multi 397s test_next_multi (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_next_multi) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 397s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 397s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 397s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 397s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 397s ok 397s INFO:memProf:Time: 0.005s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_next_multi 397s test_openimage_multiframes (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_openimage_multiframes) 397s test if openimage can directly read first or second frame of a multi-frame ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 397s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 397s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 397s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 397s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 397s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 397s ok 397s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_openimage_multiframes 397s test_previous_mono (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_mono) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 397s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 397s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 397s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 397s ok 397s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_mono 397s test_previous_multi (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_multi) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 397s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 397s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 397s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 397s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 397s ok 397s INFO:memProf:Time: 0.005s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_multi 397s test_fastread (fabio.test.codecs.test_edfimage.TestEdfFastRead.test_fastread) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 398s ok 398s INFO:memProf:Time: 0.280s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfFastRead.test_fastread 398s testBzip2 (fabio.test.codecs.test_edfimage.TestEdfWrite.testBzip2) ... ok 398s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfWrite.testBzip2 398s testFlat (fabio.test.codecs.test_edfimage.TestEdfWrite.testFlat) ... ok 398s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfWrite.testFlat 398s testGzip (fabio.test.codecs.test_edfimage.TestEdfWrite.testGzip) ... ok 398s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfWrite.testGzip 398s test_bug_27 (fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_27) 398s import fabio ... ok 398s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_27 398s test_bug_459 (fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_459) ... ok 398s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_459 398s test_remove_metadata_header (fabio.test.codecs.test_edfimage.TestEdfRegression.test_remove_metadata_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.edf.bz2') 398s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/face.edf (frame 0) misses mandatory keys: SIZE 398s ok 398s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfRegression.test_remove_metadata_header 398s test_base (fabio.test.codecs.test_edfimage.TestBadFiles.test_base) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_base.edf (frame 0) misses mandatory keys: HEADERID SIZE 398s INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_base.edf (frame 1) misses mandatory keys: HEADERID SIZE 398s ok 398s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_base 398s test_empty (fabio.test.codecs.test_edfimage.TestBadFiles.test_empty) ... ok 398s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_empty 398s test_full_frame_plus_half_header (fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_half_header) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_half_header.edf (frame 0) misses mandatory keys: HEADERID SIZE 398s ok 398s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_half_header 398s test_full_frame_plus_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data.edf (frame 0) misses mandatory keys: HEADERID SIZE 398s INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data.edf (frame 1) misses mandatory keys: HEADERID SIZE 398s ERROR:fabio.edfimage:Data stream is incomplete: 131072 < expected 262144 bytes 398s ok 398s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data 398s test_full_frame_plus_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data.edf (frame 0) misses mandatory keys: HEADERID SIZE 398s INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data.edf (frame 1) misses mandatory keys: HEADERID SIZE 398s ok 398s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data 398s test_half_header (fabio.test.codecs.test_edfimage.TestBadFiles.test_half_header) ... ok 398s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_half_header 398s test_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_half_data.edf (frame 0) misses mandatory keys: HEADERID SIZE 398s ERROR:fabio.edfimage:Data stream is incomplete: 131072 < expected 262144 bytes 398s ok 398s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_half_data 398s test_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_no_data.edf (frame 0) misses mandatory keys: HEADERID SIZE 398s ok 398s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_no_data 398s test_wrong_magic (fabio.test.codecs.test_edfimage.TestBadFiles.test_wrong_magic) ... ok 398s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_wrong_magic 398s test_base (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 398s INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base.edf.gz (frame 1) misses mandatory keys: HEADERID SIZE 398s ok 398s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base 398s test_empty (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_empty) ... ok 398s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_empty 398s test_full_frame_plus_half_header (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_half_header) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_half_header.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 398s ok 398s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_half_header 398s test_full_frame_plus_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 398s INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data.edf.gz (frame 1) misses mandatory keys: HEADERID SIZE 398s ok 398s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data 398s test_full_frame_plus_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 398s INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data.edf.gz (frame 1) misses mandatory keys: HEADERID SIZE 398s ok 398s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data 398s test_half_header (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_half_header) ... ok 398s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_half_header 398s test_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_half_data.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 398s ok 398s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_half_data 398s test_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_4wrneqt2_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_no_data.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 398s ok 398s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_no_data 398s test_wrong_magic (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_wrong_magic) ... ok 398s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_wrong_magic 398s test_multi_frame (fabio.test.codecs.test_edfimage.TestEdfIterator.test_multi_frame) 398s Test iterator on a multi-frame EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 398s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 398s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 398s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 398s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 398s ok 398s INFO:memProf:Time: 0.802s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfIterator.test_multi_frame 398s test_single_frame (fabio.test.codecs.test_edfimage.TestEdfIterator.test_single_frame) 398s Test iterator on a single frame EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfCompressed_U16.edf') 399s ok 399s INFO:memProf:Time: 0.086s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfIterator.test_single_frame 399s test_all_images (fabio.test.codecs.test_edfimage.TestSphere2SaxsSamples.test_all_images) ... WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/utils/ExternalResources.py:214: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 399s fd.extractall(output) 399s 399s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 399s INFO:fabio.edfimage:Data stream is padded : 80484 > required 80000 bytes 399s INFO:fabio.edfimage:Data stream is padded : 80384 > required 80000 bytes 399s INFO:fabio.edfimage:Data stream is padded : 80384 > required 80000 bytes 399s INFO:fabio.edfimage:Data stream is padded : 80384 > required 80000 bytes 399s ok 399s INFO:memProf:Time: 0.057s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestSphere2SaxsSamples.test_all_images 399s testNonAsciiHeader (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testNonAsciiHeader) 399s Non-ascii characters are skipped. ... WARNING:fabio.edfimage:Non ASCII in key-value: Drop b'mykey' = b'\xc3\xa9yvalue' 399s ok 399s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testNonAsciiHeader 399s testReadBadPadding (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadBadPadding) 399s Some old data were found with headers padded with 0xcd (issue #373) ... ok 399s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadBadPadding 399s testReadGoodPadding (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadGoodPadding) ... ok 399s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadGoodPadding 399s testReadZeroPadding (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadZeroPadding) ... ok 399s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadZeroPadding 399s test_edf6_single_raw_bf_gblk_gz (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edf6_single_raw_bf_gblk_gz) 399s Test reading gzipped data files linking to an external binary data file. ... WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/utils/ExternalResources.py:214: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 399s fd.extractall(output) 399s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 399s ok 399s INFO:memProf:Time: 0.140s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edf6_single_raw_bf_gblk_gz 399s test_edfblocktypes (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfblocktypes) 399s Test reading (gzipped) extended edf multi frame data files with and without a general block ... INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 399s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 399s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 399s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 399s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 399s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 399s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 399s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 399s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 399s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 399s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 399s INFO:fabio.edfimage:Data stream is padded : 2875 > required 2400 bytes 399s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 399s INFO:fabio.edfimage:Data stream is padded : 2874 > required 2400 bytes 399s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 399s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 399s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 399s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 399s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 399s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 399s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 399s INFO:fabio.edfimage:Data stream is padded : 2875 > required 2400 bytes 399s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 399s INFO:fabio.edfimage:Data stream is padded : 2874 > required 2400 bytes 399s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 399s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 399s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 399s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 399s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 399s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 399s ok 399s INFO:memProf:Time: 0.159s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfblocktypes 399s test_edfmulti_raw_bf_gblk (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk) 399s Reading an uncompressed edf-multi-frame-file with references to data ... WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/utils/ExternalResources.py:214: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 399s fd.extractall(output) 399s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 399s ok 399s INFO:memProf:Time: 0.243s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk 399s test_edfmulti_raw_bf_gblk_gz (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk_gz) 399s Test reading the files of the test test_edfmulti_raw_bf_gblk after ... WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 399s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 399s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 399s ok 399s INFO:memProf:Time: 0.256s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk_gz 399s test_edfmulti_raw_dark_raw_bf_gblk (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_dark_raw_bf_gblk) 400s Linking data of several frames to different parts of a single external ... INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 400s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 400s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 400s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 400s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 400s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 400s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 400s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 400s ok 400s INFO:memProf:Time: 0.124s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_dark_raw_bf_gblk 400s test_edfsingle_raw_bf_gblk (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk) 400s Reading an uncompressed edf-single-frame-file with references to data ... WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 400s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 400s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 400s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 400s ok 400s INFO:memProf:Time: 0.122s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk 400s test_edfsingle_raw_bf_gblk_gz (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk_gz) 400s Test reading gzipped data files linking to an external binary data file. ... WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 400s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 400s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 400s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 400s ok 400s INFO:memProf:Time: 0.123s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk_gz 400s test_pitfalls (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_pitfalls) 400s multi5+headerblob_edf1.edf.gz ... INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 400s ok 400s INFO:memProf:Time: 0.155s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_pitfalls 400s test_special (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_special) 400s 09_special/face_ok.edf.gz ... INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_ok.edf.gz (frame 0) misses mandatory keys: SIZE 400s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_ok.edf.gz (frame 0) misses mandatory keys: SIZE 400s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary1.edf.gz (frame 0) misses mandatory keys: SIZE 400s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary1.edf.gz (frame 0) misses mandatory keys: SIZE 400s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary2.edf.gz (frame 0) misses mandatory keys: SIZE 400s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary2.edf.gz (frame 0) misses mandatory keys: SIZE 400s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary3.edf.gz (frame 0) misses mandatory keys: SIZE 400s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary3.edf.gz (frame 0) misses mandatory keys: SIZE 400s ok 400s INFO:memProf:Time: 0.132s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_special 400s test_bug_388 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_388) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 400s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 400s ok 400s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_388 400s test_bug_408 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_408) 400s Bug when reading files generated by XDS ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 400s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 400s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XDS.cbf.bz2') 400s ok 400s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_408 400s test_bug_528 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_528) 400s Bug when writing/reading small files ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 400s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 400s ok 400s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_528 400s test_bug_535 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_535) 400s Bug when reading files with long path in header ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 400s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 400s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('ref-test_5_0001.cbf') 400s ok 400s INFO:memProf:Time: 0.020s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_535 400s test_byte_offset (fabio.test.codecs.test_cbfimage.TestCbfReader.test_byte_offset) 400s check byte offset algorithm ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 400s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 400s INFO:fabio.test.codecs.test_cbfimage:Timing for Numpy method : 0.087s 400s INFO:fabio.test.codecs.test_cbfimage:Timing for Cython method : 0.012s, max delta= 0 400s ok 400s INFO:memProf:Time: 0.136s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_byte_offset 400s test_cif (fabio.test.codecs.test_cbfimage.TestCbfReader.test_cif) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 400s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 400s ok 400s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_cif 400s test_consitency_convert (fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_convert) 400s Test if an image can be read and saved and the results are "similar" ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 400s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 400s ok 400s INFO:memProf:Time: 0.096s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_convert 400s test_consitency_manual (fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_manual) 400s Test if an image can be read and saved and the results are "similar" ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 400s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 400s ok 400s INFO:memProf:Time: 0.103s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_manual 400s test_read (fabio.test.codecs.test_cbfimage.TestCbfReader.test_read) 400s check whole reader ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 400s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 401s INFO:fabio.test.codecs.test_cbfimage:Reading CBF took 0.027s whereas the same EDF took 0.000s 401s ok 401s INFO:memProf:Time: 0.060s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_read 401s test_unicode (fabio.test.codecs.test_cbfimage.TestCbfReader.test_unicode) 401s Test if an image can be read and saved to an unicode named ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 401s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 401s ok 401s INFO:memProf:Time: 0.101s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_unicode 401s test_write (fabio.test.codecs.test_cbfimage.TestCbfReader.test_write) 401s Rest writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 401s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 401s ok 401s INFO:memProf:Time: 0.103s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_write 401s testsame (fabio.test.codecs.test_dtrekimage.TestMatch.testsame) 401s test ADSC image match to EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 401s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.edf.bz2') 401s ok 401s INFO:memProf:Time: 0.088s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestMatch.testsame 401s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('HSA_1_5mg_C1_0004.img.bz2') 401s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 401s test_read (fabio.test.codecs.test_dtrekimage.TestRealSamples.test_read) 402s check we can read flat ADSC images ... ok 402s INFO:memProf:Time: 0.943s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestRealSamples.test_read 402s test_write_and_read (fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read) ... WARNING:fabio.dtrekimage:Data type uint64 unsupported. Store it as uint32. 402s WARNING:fabio.dtrekimage:Data type int64 unsupported. Store it as int32. 402s WARNING:fabio.dtrekimage:Data type float16 unsupported. Store it as float32. 402s ok 402s INFO:memProf:Time: 0.010s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read 402s test_write_and_read_cube (fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_cube) ... ok 402s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_cube 402s test_write_and_read_empty (fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_empty) ... ok 402s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_empty 402s test_getmatch (fabio.test.codecs.test_fit2dmaskimage.TestFaceMask.test_getmatch) 402s test edf and msk are the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 402s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.edf.bz2') 402s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/face.edf (frame 0) misses mandatory keys: SIZE 402s ok 402s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestFaceMask.test_getmatch 402s test_getmatch (fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_getmatch) 402s test edf and msk are the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.msk.bz2') 402s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.edf.bz2') 402s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/fit2d_click.edf (frame 0) misses mandatory keys: SIZE 402s ok 402s INFO:memProf:Time: 0.005s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_getmatch 402s test_read (fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_read) 402s Check it reads a mask OK ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.msk.bz2') 402s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.edf.bz2') 402s ok 402s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_read 402s testBzip2 (fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testBzip2) ... ok 402s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testBzip2 402s testFlat (fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testFlat) ... ok 402s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testFlat 402s testGzip (fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testGzip) ... ok 402s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testGzip 402s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.spr.bz2') 402s test_read (fabio.test.codecs.test_fit2dspreadsheetimage.TestRealSamples.test_read) 406s check we can read flat ADSC images ... ok 406s INFO:memProf:Time: 4.386s RAM: 0.000 Mb fabio.test.codecs.test_fit2dspreadsheetimage.TestRealSamples.test_read 406s test_read (fabio.test.codecs.test_geimage.TestGE.test_read) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_aSI_detector_image_1529.bz2') 406s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_aSI_detector_image_1529.gz') 406s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_aSI_detector_image_1529') 406s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_image_1frame_intact_header.ge') 406s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_image_1frame_blanked_header.ge') 406s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('dark_before_000428.edf.ge5') 407s ok 407s INFO:memProf:Time: 0.429s RAM: 0.000 Mb fabio.test.codecs.test_geimage.TestGE.test_read 407s test_aux (fabio.test.codecs.test_mar345image.TestMar345.test_aux) 407s test auxillary functions ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 407s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 407s ok 407s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_aux 407s test_byteswap_write (fabio.test.codecs.test_mar345image.TestMar345.test_byteswap_write) 407s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 407s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 411s ok 411s INFO:memProf:Time: 4.693s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_byteswap_write 411s test_memoryleak (fabio.test.codecs.test_mar345image.TestMar345.test_memoryleak) 411s This test takes a lot of time, so only in debug mode. ... skipped 'very slow test' 411s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_memoryleak 411s test_read (fabio.test.codecs.test_mar345image.TestMar345.test_read) 411s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 411s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 411s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300') 411s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 412s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.gz') 412s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560') 412s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 413s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.gz') 413s ok 413s INFO:memProf:Time: 1.489s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_read 413s test_write (fabio.test.codecs.test_mar345image.TestMar345.test_write) 413s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 413s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 417s ok 417s INFO:memProf:Time: 4.618s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_write 417s test_read (fabio.test.codecs.test_brukerimage.TestBruker.test_read) 417s see if we can read the test image ... ok 417s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestBruker.test_read 417s test_read (fabio.test.codecs.test_brukerimage.TestBzipBruker.test_read) 417s see if we can read the test image ... ok 417s INFO:memProf:Time: 0.035s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestBzipBruker.test_read 417s test_read (fabio.test.codecs.test_brukerimage.TestGzipBruker.test_read) 417s see if we can read the test image ... ok 417s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestGzipBruker.test_read 417s test_read (fabio.test.codecs.test_brukerimage.TestRealImg.test_read) 417s check we can read bruker images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 417s ok 417s INFO:memProf:Time: 0.026s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestRealImg.test_read 417s test_write (fabio.test.codecs.test_brukerimage.TestRealImg.test_write) 417s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 418s ok 418s INFO:memProf:Time: 0.157s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestRealImg.test_write 418s test_linear (fabio.test.codecs.test_brukerimage.TestBrukerLinear.test_linear) 418s test for self consistency of random data read/write ... WARNING:fabio.brukerimage:performing correction with slope=5.96043143729988e-08, offset=3.5198218e-06 (LINEAR=5.96043143729988e-08 3.5198218e-06) 418s ok 418s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestBrukerLinear.test_linear 418s test_conversion (fabio.test.codecs.test_bruker100image.TestBruker100.test_conversion) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 418s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 418s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('testcbf.cbf.bz2') 418s ok 418s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_conversion 418s test_read (fabio.test.codecs.test_bruker100image.TestBruker100.test_read) 418s check we can read bruker100 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 418s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 418s ok 418s INFO:memProf:Time: 0.023s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_read 418s test_same (fabio.test.codecs.test_bruker100image.TestBruker100.test_same) 418s check we can read bruker100 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 418s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 418s ok 418s INFO:memProf:Time: 0.078s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_same 418s test_split_merge (fabio.test.codecs.test_bruker100image.TestBruker100.test_split_merge) 418s Pretty challanging random example ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 418s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 418s INFO:fabio.test.codecs.test_bruker100image:size of underflow: (65164,) overflow1 (100,) overflow2: (95,) 418s INFO:fabio.test.codecs.test_bruker100image:size of underflow: (1582,) overflow1 (166,) overflow2: (95,) 418s INFO:fabio.test.codecs.test_bruker100image:size of underflow: (0,) overflow1 (1624,) overflow2: (1553,) 418s ok 418s INFO:memProf:Time: 0.007s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_split_merge 418s test_write (fabio.test.codecs.test_bruker100image.TestBruker100.test_write) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 418s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 418s ok 418s INFO:memProf:Time: 0.005s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_write 418s test_read (fabio.test.codecs.test_mccdimage.TestFlatMccds.test_read) 418s check we can read MarCCD images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('corkcont2_H_0089.mccd.bz2') 418s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.bz2') 418s ok 418s INFO:memProf:Time: 0.346s RAM: 0.000 Mb fabio.test.codecs.test_mccdimage.TestFlatMccds.test_read 418s test_read_openimage (fabio.test.codecs.test_mccdimage.TestNormalTiffOK.test_read_openimage) ... ok 418s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_mccdimage.TestNormalTiffOK.test_read_openimage 418s test_read (fabio.test.codecs.test_oxdimage.TestOxd.test_read) 418s Test reading of compressed OXD images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 418s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 418s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('100nmfilmonglass_1_1.img.bz2') 418s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus300k.rod_img.bz2') 418s INFO:fabio.OXDimage:Compressed with the TY5 compression 418s INFO:fabio.OXDimage:TY5 decompression is slow for now 421s INFO:fabio.OXDimage:TY5: Exception: 16bits: 2844, 32bits: 0 421s ok 421s INFO:memProf:Time: 2.755s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxd.test_read 421s test_write (fabio.test.codecs.test_oxdimage.TestOxd.test_write) 421s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 421s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 421s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('100nmfilmonglass_1_1.img.bz2') 421s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus300k.rod_img.bz2') 421s INFO:fabio.test.codecs.test_oxdimage:Skip write test for now 421s INFO:fabio.OXDimage:Compressed with the TY5 compression 421s INFO:fabio.OXDimage:TY5 decompression is slow for now 424s INFO:fabio.OXDimage:TY5: Exception: 16bits: 2844, 32bits: 0 424s INFO:fabio.test.codecs.test_oxdimage:Skip write test for now 424s INFO:fabio.test.codecs.test_oxdimage:Skip write test for now 424s ok 424s INFO:memProf:Time: 2.782s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxd.test_write 424s test_same (fabio.test.codecs.test_oxdimage.TestOxdSame.test_same) 424s test if images are actually the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 424s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 424s ok 424s INFO:memProf:Time: 0.007s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxdSame.test_same 424s test_same (fabio.test.codecs.test_oxdimage.TestOxdBig.test_same) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('d80_60s.img.bz2') 424s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('d80_60s.edf.bz2') 424s WARNING:fabio.edfimage:Unknown compression scheme TY1 424s ok 424s INFO:memProf:Time: 0.089s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxdBig.test_same 424s test_convert (fabio.test.codecs.test_oxdimage.TestConvert.test_convert) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 424s WARNING:fabio.OXDimage:Enforce TY1 compression 424s ok 424s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestConvert.test_convert 424s test_read (fabio.test.codecs.test_kcdimage.TestKcd.test_read) 424s check we can read kcd images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.kcd.bz2') 424s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.edf.bz2') 424s ok 424s INFO:memProf:Time: 0.674s RAM: 0.000 Mb fabio.test.codecs.test_kcdimage.TestKcd.test_read 424s test_same (fabio.test.codecs.test_kcdimage.TestKcd.test_same) 424s see if we can read kcd images and if they are the same as the EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.kcd.bz2') 424s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.edf.bz2') 425s ok 425s INFO:memProf:Time: 0.532s RAM: 0.000 Mb fabio.test.codecs.test_kcdimage.TestKcd.test_same 425s test_bug502 (fabio.test.codecs.test_tifimage.TestTif.test_bug502) 425s Test the reading of a frame with wrong Photometric interpretation ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('frame_00017.npy') 425s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('frame_00017.tif') 425s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 425s ok 425s INFO:memProf:Time: 0.015s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_bug502 425s test_frame (fabio.test.codecs.test_tifimage.TestTif.test_frame) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.bz2') 425s WARNING:fabio.TiffIO:Bogus StripByteCounts information 425s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.gz') 425s WARNING:fabio.TiffIO:Bogus StripByteCounts information 425s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS') 425s WARNING:fabio.TiffIO:Bogus StripByteCounts information 425s ok 425s INFO:memProf:Time: 0.150s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_frame 425s test_header (fabio.test.codecs.test_tifimage.TestTif.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.bz2') 425s WARNING:fabio.TiffIO:Bogus StripByteCounts information 425s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.gz') 425s WARNING:fabio.TiffIO:Bogus StripByteCounts information 425s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS') 425s WARNING:fabio.TiffIO:Bogus StripByteCounts information 425s ok 425s INFO:memProf:Time: 0.148s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_header 425s test_read (fabio.test.codecs.test_tifimage.TestTif.test_read) 425s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.bz2') 425s WARNING:fabio.TiffIO:Bogus StripByteCounts information 425s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.gz') 425s WARNING:fabio.TiffIO:Bogus StripByteCounts information 425s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS') 425s WARNING:fabio.TiffIO:Bogus StripByteCounts information 425s ok 425s INFO:memProf:Time: 0.156s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_read 425s test1 (fabio.test.codecs.test_tifimage.TestGzipTif.test1) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('oPPA_5grains_0001.tif.bz2') 426s ok 426s INFO:memProf:Time: 0.105s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestGzipTif.test1 426s test1 (fabio.test.codecs.test_tifimage.TestTif_Rect.test1) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('testmap1_0002.tif.bz2') 426s ok 426s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_Rect.test1 426s test1 (fabio.test.codecs.test_tifimage.TestTifImage_A0009.test1) 426s Testing packbit comressed data tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('a0009.tif.bz2') 426s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('a0009.edf.bz2') 426s WARNING:fabio.TiffIO:Non standard TIFF. Rows per strip TAG missing 426s WARNING:fabio.TiffIO:Non standard TIFF. Strip byte counts TAG missing 426s ok 426s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_A0009.test1 426s test1 (fabio.test.codecs.test_tifimage.TestTifImage_fit2d.test1) 426s Testing packbit comressed data tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 426s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.edf.bz2') 426s WARNING:fabio.TiffIO:TIFF file tag 270 contains non ASCII/UTF-8 characters. 426s WARNING:fabio.edfimage:Unknown compression scheme FALSE 426s ok 426s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_fit2d.test1 426s test1 (fabio.test.codecs.test_tifimage.TestTifImage_Packbits.test1) 426s Testing packbit comressed data tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('oPPA_5grains_0001.tif.bz2') 426s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('oPPA_5grains_0001.edf.bz2') 426s ok 426s INFO:memProf:Time: 0.396s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_Packbits.test1 426s test1 (fabio.test.codecs.test_tifimage.TestTifImage_Pilatus.test1) 426s Testing pilatus tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus2M.tif.bz2') 426s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus2M.edf.bz2') 426s WARNING:fabio.TiffIO:TIFF file tag 270 contains non ASCII/UTF-8 characters. 427s ok 427s INFO:memProf:Time: 0.968s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_Pilatus.test1 427s test_pil (fabio.test.codecs.test_tifimage.TestTif_Colormap.test_pil) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('indexed_color.tif.bz2') 427s ok 427s INFO:memProf:Time: 0.033s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_Colormap.test_pil 427s test_tiffio (fabio.test.codecs.test_tifimage.TestTif_Colormap.test_tiffio) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('indexed_color.tif.bz2') 427s WARNING:fabio.tifimage:Third dimension is the color 427s WARNING:fabio.tifimage:Third dimension is the color 427s WARNING:fabio.tifimage:Third dimension is the color 427s ok 427s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_Colormap.test_tiffio 427s test_all_images (fabio.test.codecs.test_tifimage.TestTif_LibTiffPic.test_all_images) ... WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/utils/ExternalResources.py:214: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 427s fd.extractall(output) 427s 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif with TiffIO due to Unsupported number of bits for unsigned int: (4, 4, 4), trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif with PIL: cannot identify image file 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif: no tiff reader managed to read the file. 427s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/dscf0013.tif with TiffIO due to could not broadcast input array from shape (10,640,3) into shape (15,640,3), trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/dscf0013.tif with PIL: image file is truncated (1280 bytes not processed) 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/dscf0013.tif: no tiff reader managed to read the file. 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif with TiffIO due to Unsupported number of bits for unsigned int: (10, 10, 10), trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif with PIL: cannot identify image file 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif: no tiff reader managed to read the file. 427s WARNING:fabio.tifimage:Third dimension is the color 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif with TiffIO due to Unsupported number of bits for unsigned int: (12, 12, 12), trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif with PIL: cannot identify image file 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif: no tiff reader managed to read the file. 427s WARNING:fabio.TiffIO:Data at tag id '37439' is smaller than expected 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif with PIL: cannot identify image file 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif: no tiff reader managed to read the file. 427s WARNING:fabio.TiffIO:Data at tag id '37439' is smaller than expected 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif with PIL: cannot identify image file 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif: no tiff reader managed to read the file. 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/zackthecat.tif with TiffIO due to 273 is not in list, trying PIL 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif with TiffIO due to Unsupported number of bits for unsigned int: (10, 10, 10), trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif with PIL: cannot identify image file 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif: no tiff reader managed to read the file. 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-02.tif with TiffIO due to Unsupported number of bits for unsigned int: 2, trying PIL 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif with TiffIO due to Unsupported number of bits for unsigned int: (14, 14, 14), trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif with PIL: cannot identify image file 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif: no tiff reader managed to read the file. 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-08.tif with TiffIO due to cannot reshape array of size 3139 into shape (73,3), trying PIL 427s WARNING:fabio.tifimage:Third dimension is the color 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif with TiffIO due to Unsupported number of bits for unsigned int: (12, 12, 12), trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif with PIL: cannot identify image file 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif: no tiff reader managed to read the file. 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-04.tif with TiffIO due to Unsupported number of bits for unsigned int: 4, trying PIL 427s WARNING:fabio.tifimage:Third dimension is the color 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/ycbcr-cat.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif with TiffIO due to Unsupported number of bits for unsigned int: (14, 14, 14), trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif with PIL: cannot identify image file 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif: no tiff reader managed to read the file. 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif with TiffIO due to Unsupported number of bits for unsigned int: 6, trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif with PIL: cannot identify image file 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif: no tiff reader managed to read the file. 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/fax2d.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif with TiffIO due to Unsupported number of bits for unsigned int: 10, trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif with PIL: cannot identify image file 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif: no tiff reader managed to read the file. 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-16.tif with TiffIO due to cannot reshape array of size 3139 into shape (73,3), trying PIL 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/strike.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 427s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-08.tif with TiffIO due to Unsupported number of bits for unsigned int: (8, 8, 8, 8), trying PIL 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif with TiffIO due to Unsupported number of bits for unsigned int: 12, trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif with PIL: cannot identify image file 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif: no tiff reader managed to read the file. 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/cramps-tile.tif with TiffIO due to cannot reshape array of size 65536 into shape (800), trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/cramps-tile.tif with PIL: image file is truncated (126 bytes not processed) 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/cramps-tile.tif: no tiff reader managed to read the file. 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif with TiffIO due to %d format: a real number is required, not bytes, trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif with PIL: cannot identify image file 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif: no tiff reader managed to read the file. 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/text.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 427s ThunderDecode: Not enough data at scanline 320 (0 != 1512). 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/smallliz.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/g3test.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif with TiffIO due to Unsupported number of bits for unsigned int: 14, trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif with PIL: cannot identify image file 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif: no tiff reader managed to read the file. 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/oxford.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 427s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-08.tif with TiffIO due to Unsupported number of bits for unsigned int: (8, 8, 8, 8), trying PIL 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/quad-tile.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/quad-lzw.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif with TiffIO due to %d format: a real number is required, not bytes, trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif with PIL: cannot identify image file 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif: no tiff reader managed to read the file. 427s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-16.tif with TiffIO due to Unsupported number of bits for unsigned int: (16, 16, 16, 16), trying PIL 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/jim___ah.tif with TiffIO due to Unsupported number of bits for unsigned int: 1, trying PIL 427s WARNING:fabio.tifimage:Third dimension is the color 427s WARNING:fabio.tifimage:Third dimension is the color 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-palette-02.tif with TiffIO due to Unsupported number of bits for unsigned int: 2, trying PIL 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif with PIL: cannot identify image file 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif: no tiff reader managed to read the file. 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif with TiffIO due to Unsupported number of bits for unsigned int: (2, 2, 2), trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif with PIL: cannot identify image file 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif: no tiff reader managed to read the file. 427s WARNING:fabio.tifimage:Third dimension is the color 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-palette-04.tif with TiffIO due to Unsupported number of bits for unsigned int: 4, trying PIL 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif with TiffIO due to Unsupported number of bits for unsigned int: 24, trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif with PIL: cannot identify image file 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif: no tiff reader managed to read the file. 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif with TiffIO due to Unsupported number of bits for unsigned int: (4, 4, 4), trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif with PIL: cannot identify image file 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif: no tiff reader managed to read the file. 427s WARNING:fabio.TiffIO:Data at tag id '37439' is smaller than expected 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif with PIL: cannot identify image file 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif: no tiff reader managed to read the file. 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/ladoga.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 427s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-16.tif with TiffIO due to Unsupported number of bits for unsigned int: (16, 16, 16, 16), trying PIL 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/quad-jpeg.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif with TiffIO due to Unsupported number of bits for unsigned int: (2, 2, 2), trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif with PIL: cannot identify image file 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif: no tiff reader managed to read the file. 427s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif with TiffIO due to cannot reshape array of size 2044 into shape (73,3), trying PIL 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif with PIL: cannot identify image file 427s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif: no tiff reader managed to read the file. 427s WARNING:fabio.tifimage:Third dimension is the color 427s ok 427s INFO:memProf:Time: 0.157s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_LibTiffPic.test_all_images 427s test_invert (fabio.test.codecs.test_xsdimage.TestXSD.test_invert) 427s Tests that 2 matrixes are invert ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.edf.bz2') 427s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.xml.bz2') 427s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImageInv.xml.bz2') 427s ok 427s INFO:memProf:Time: 0.023s RAM: 0.000 Mb fabio.test.codecs.test_xsdimage.TestXSD.test_invert 427s test_read (fabio.test.codecs.test_xsdimage.TestXSD.test_read) 427s Test reading of XSD images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.edf.bz2') 427s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.xml.bz2') 427s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImageInv.xml.bz2') 427s INFO:fabio.test.codecs.test_xsdimage:XSDataImage.xml 667.15 667.1489268499176 427s INFO:fabio.test.codecs.test_xsdimage:XSDataImageInv.xml 0.01 0.010599090552568758 427s ok 427s INFO:memProf:Time: 0.011s RAM: 0.000 Mb fabio.test.codecs.test_xsdimage.TestXSD.test_read 427s test_same (fabio.test.codecs.test_xsdimage.TestXSD.test_same) 427s test if an image is the same as the EDF equivalent ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.edf.bz2') 427s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.xml.bz2') 427s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImageInv.xml.bz2') 427s ok 427s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.codecs.test_xsdimage.TestXSD.test_same 427s test_memoryleak (fabio.test.codecs.test_raxisimage.TestRaxisImage.test_memoryleak) 427s This test takes a lot of time, so only in debug mode. ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mgzn-20hpt.img.bz2') 427s ok 427s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_raxisimage.TestRaxisImage.test_memoryleak 427s test_read (fabio.test.codecs.test_raxisimage.TestRaxisImage.test_read) 427s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mgzn-20hpt.img.bz2') 428s ok 428s INFO:memProf:Time: 0.626s RAM: 0.000 Mb fabio.test.codecs.test_raxisimage.TestRaxisImage.test_read 428s test_read (fabio.test.codecs.test_pnmimage.TestPNM.test_read) 428s check we can read pnm images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('image0001.pgm.bz2') 428s ok 428s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_pnmimage.TestPNM.test_read 428s test_write (fabio.test.codecs.test_pnmimage.TestPNM.test_write) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('image0001.pgm.bz2') 428s ok 428s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pnmimage.TestPNM.test_write 428s test_multidim (fabio.test.codecs.test_numpyimage.TestNumpy.test_multidim) ... ok 428s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_numpyimage.TestNumpy.test_multidim 428s test_read (fabio.test.codecs.test_numpyimage.TestNumpy.test_read) 428s check we can read pnm images ... ok 428s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_numpyimage.TestNumpy.test_read 428s test_write (fabio.test.codecs.test_numpyimage.TestNumpy.test_write) 428s check we can write numpy images ... ok 428s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_numpyimage.TestNumpy.test_write 428s test_frame (fabio.test.codecs.test_pilatusimage.TestPilatus.test_frame) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.bz2') 428s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.gz') 428s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS') 428s ok 428s INFO:memProf:Time: 0.038s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus.test_frame 428s test_header (fabio.test.codecs.test_pilatusimage.TestPilatus.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.bz2') 428s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.gz') 428s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS') 428s ok 428s INFO:memProf:Time: 0.038s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus.test_header 428s test_read (fabio.test.codecs.test_pilatusimage.TestPilatus.test_read) 428s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.bz2') 428s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.gz') 428s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS') 428s ok 428s INFO:memProf:Time: 0.042s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus.test_read 428s test_header (fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif.bz2') 428s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 428s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif') 428s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 428s ok 428s INFO:memProf:Time: 0.091s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_header 428s test_read (fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_read) 428s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif.bz2') 428s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 428s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif') 428s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 428s ok 428s INFO:memProf:Time: 0.092s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_read 428s test_bug_479 (fabio.test.codecs.test_eigerimage.TestEiger.test_bug_479) ... WARNING:fabio.eigerimage:hdf5plugin is needed for bitshuffle-LZ4 compression, falling back on gzip (slower) 428s ok 428s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_bug_479 428s test_frames_abort_iteration (fabio.test.codecs.test_eigerimage.TestEiger.test_frames_abort_iteration) ... ok 428s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_frames_abort_iteration 428s test_frames_full_iteration (fabio.test.codecs.test_eigerimage.TestEiger.test_frames_full_iteration) ... ok 428s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_frames_full_iteration 428s test_frames_random_access (fabio.test.codecs.test_eigerimage.TestEiger.test_frames_random_access) ... ok 428s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_frames_random_access 428s test_open (fabio.test.codecs.test_eigerimage.TestEiger.test_open) 428s check we can read images from Eiger ... ok 428s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_open 428s test_read (fabio.test.codecs.test_eigerimage.TestEiger.test_read) 428s check we can read images from Eiger ... ok 428s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_read 428s test_write (fabio.test.codecs.test_eigerimage.TestEiger.test_write) ... WARNING:fabio.eigerimage:hdf5plugin is needed for bitshuffle-LZ4 compression, falling back on gzip (slower) 428s ok 428s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_write 428s test_iterate (fabio.test.codecs.test_hdf5image.TestHdf5.test_iterate) ... ok 428s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_iterate 428s test_next_frames (fabio.test.codecs.test_hdf5image.TestHdf5.test_next_frames) 428s check the legacy next API ... ok 428s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_next_frames 428s test_open (fabio.test.codecs.test_hdf5image.TestHdf5.test_open) 428s check we can read images from Eiger ... ok 428s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_open 428s test_read (fabio.test.codecs.test_hdf5image.TestHdf5.test_read) 428s check we can read images from Eiger ... ok 428s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_read 428s test_mask (fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_mask) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.f2d.bz2') 428s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 428s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.f2d.bz2') 428s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.cbf.bz2') 428s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.msk.bz2') 428s ok 428s INFO:memProf:Time: 0.307s RAM: 0.000 Mb fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_mask 428s test_match (fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_match) 428s test edf and msk are the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.f2d.bz2') 428s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 428s WARNING:fabio.TiffIO:TIFF file tag 270 contains non ASCII/UTF-8 characters. 428s ok 428s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_match 428s test_read (fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_read) 428s Check it reads a mask OK ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.f2d.bz2') 428s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 428s ok 428s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_read 428s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v2.SPE.bz2') 428s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v2_converted.SPE.bz2') 428s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v3.spe.bz2') 428s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v3_custom_roi.spe.bz2') 428s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v3_2frames.spe.bz2') 428s test_calibration (fabio.test.codecs.test_speimage.TestSpeImage.test_calibration) ... ok 428s INFO:memProf:Time: 0.016s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_calibration 428s test_center_wavelength (fabio.test.codecs.test_speimage.TestSpeImage.test_center_wavelength) ... ok 428s INFO:memProf:Time: 0.013s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_center_wavelength 428s test_detector (fabio.test.codecs.test_speimage.TestSpeImage.test_detector) ... ok 428s INFO:memProf:Time: 0.012s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_detector 428s test_exposure_time (fabio.test.codecs.test_speimage.TestSpeImage.test_exposure_time) ... ok 428s INFO:memProf:Time: 0.015s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_exposure_time 429s test_fabio_integration (fabio.test.codecs.test_speimage.TestSpeImage.test_fabio_integration) ... ok 429s INFO:memProf:Time: 0.176s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_fabio_integration 429s test_grating (fabio.test.codecs.test_speimage.TestSpeImage.test_grating) ... ok 429s INFO:memProf:Time: 0.013s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_grating 429s test_multiple_frames (fabio.test.codecs.test_speimage.TestSpeImage.test_multiple_frames) ... ok 429s INFO:memProf:Time: 0.028s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_multiple_frames 429s test_read_data (fabio.test.codecs.test_speimage.TestSpeImage.test_read_data) ... ok 429s INFO:memProf:Time: 0.017s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_read_data 429s test_reading_version2_spe (fabio.test.codecs.test_speimage.TestSpeImage.test_reading_version2_spe) ... ok 429s INFO:memProf:Time: 0.012s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_reading_version2_spe 429s test_roi (fabio.test.codecs.test_speimage.TestSpeImage.test_roi) ... ok 429s INFO:memProf:Time: 0.022s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_roi 429s test_time (fabio.test.codecs.test_speimage.TestSpeImage.test_time) ... ok 429s INFO:memProf:Time: 0.013s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_time 429s test_read_empty_file (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_empty_file) ... ok 429s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_empty_file 429s test_read_failing_file (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_failing_file) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 429s ok 429s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_failing_file 429s test_read_missing_file (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_missing_file) ... ok 429s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_missing_file 429s test_read_uint8 (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 429s ok 429s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_uint8 429s test_read_uint8 (fabio.test.codecs.test_jpegimage.TestJpegImageInsideFabio.test_read_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 429s ok 429s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImageInsideFabio.test_read_uint8 429s test_with_pil (fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_with_pil) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 429s ok 429s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_with_pil 429s test_without_pil (fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_without_pil) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 429s ok 429s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_without_pil 429s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_missing_file) ... ok 429s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_missing_file 429s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint16) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint16.jp2.bz2') 429s ok 429s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint16 429s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint8.jp2.bz2') 429s ok 429s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint8 429s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_wrong_format) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 429s ok 429s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_wrong_format 429s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_missing_file) ... ok 429s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_missing_file 429s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint16) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint16.jp2.bz2') 429s ok 429s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint16 429s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint8.jp2.bz2') 429s ok 429s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint8 429s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_wrong_format) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 429s ok 429s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_wrong_format 429s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_missing_file) ... skipped 'glymur is not available or too old' 429s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_missing_file 429s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint16) ... skipped 'glymur is not available or too old' 429s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint16 429s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint8) ... skipped 'glymur is not available or too old' 429s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint8 429s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_wrong_format) ... skipped 'glymur is not available or too old' 429s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_wrong_format 429s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_missing_file) ... ok 429s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_missing_file 429s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint16) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint16.jp2.bz2') 429s ok 429s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint16 429s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint8.jp2.bz2') 429s ok 429s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint8 429s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_wrong_format) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 429s ok 429s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_wrong_format 429s test_read (fabio.test.codecs.test_mpaimage.TestMpa.test_read) 429s Test the reading of multiwire images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mpa_test.mpa.bz2') 429s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.bz2 rb 429s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.bz2 rb 429s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.gz rb fabio. 429s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.gz rb fabio. 429s /tmp/fabio_testdata_ubuntu/GE_aSI_detector_image_1529.bz2 rb 429s /tmp/fabio_testdata_ubuntu/GE_aSI_detector_image_1529.gz rb fabio. 429s /tmp/fabio_testdata_ubuntu/corkcont2_H_0089.mccd.bz2 rb 429s /tmp/fabio_testdata_ubuntu/corkcont2_H_0089.mccd.gz rb fabio. 429s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.bz2 rb 429s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.gz rb fabio. 429s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.bz2 rb 429s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.gz rb fabio. 429s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.bz2 rb 429s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.gz rb fabio. 429s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.bz2 rb 429s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.gz rb fabio. 429s /tmp/fabio_testdata_ubuntu/oPPA_5grains_0001.tif.gz rb fabio. 429s /tmp/fabio_testdata_ubuntu/testmap1_0002.tif.gz rb fabio. 429s /tmp/fabio_testdata_ubuntu/testmap1_0002.tif.bz2 rb 429s /tmp/fabio_testdata_ubuntu/fit2d.tif.bz2 rb 429s /tmp/fabio_testdata_ubuntu/oPPA_5grains_0001.tif.bz2 rb 429s /tmp/fabio_testdata_ubuntu/pilatus2M.tif.bz2 rb 429s /tmp/fabio_testdata_ubuntu/indexed_color.tif.gz rb fabio. 429s /tmp/fabio_testdata_ubuntu/indexed_color.tif.bz2 rb 429s /tmp/fabio_testdata_ubuntu/indexed_color.tif.gz rb fabio. 429s /tmp/fabio_testdata_ubuntu/indexed_color.tif.bz2 rb 429s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.bz2 rb 429s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.gz rb fabio. 429s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.bz2 rb 429s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.gz rb fabio. 429s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.bz2 rb 429s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.gz rb fabio. 429s /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 rb 429s /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 rb 429s 0 429s 1 429s 2 429s 3 429s 4 429s 5 429s 6 429s 7 429s 8 429s 9 429s 10 429s 11 429s 12 429s 13 429s 14 429s 15 429s 16 429s 17 429s 18 429s 19 429s 20 429s 21 429s 22 429s 23 429s 24 429s 25 429s 26 429s 27 429s 28 429s 29 429s 30 429s 31 429s 32 429s 33 429s 34 429s 35 429s 36 429s 37 429s 38 429s 39 429s 40 429s 41 429s 42 429s 43 429s 44 429s 45 429s 46 429s 47 429s 48 429s 49 429s jpeg2kimage.PIL: 429s jpeg2kimage.PIL: 429s jpeg2kimage.PIL: 429s jpeg2kimage.PIL: 429s jpeg2kimage.PIL: 429s jpeg2kimage.PIL: 429s jpeg2kimage.PIL: 429s jpeg2kimage.PIL: 429s jpeg2kimage.PIL: 429s jpeg2kimage.PIL: 429s jpeg2kimage.PIL: 433s jpeg2kimage.PIL: ok 433s INFO:memProf:Time: 4.188s RAM: 0.000 Mb fabio.test.codecs.test_mpaimage.TestMpa.test_read 433s test_read (fabio.test.codecs.test_dm3image.TestDm3Image.test_read) 433s check we can read dm3 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('ref_d20x_310mm.dm3.bz2') 436s ok 436s INFO:memProf:Time: 2.995s RAM: 0.000 Mb fabio.test.codecs.test_dm3image.TestDm3Image.test_read 436s test_read (fabio.test.codecs.test_mrcimage.TestMrc.test_read) 436s check we can read mrc images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.map.bz2') 436s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.mrc.bz2') 436s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.npy.bz2') 436s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.npy.bz2') 437s INFO:fabio.mrcimage:Expected 'MAP ', got INFO:fabio.mrcimage:Expected 'MAP ', got INFO:fabio.mrcimage:Expected 'MAP ', got ok 437s INFO:memProf:Time: 0.796s RAM: 0.000 Mb fabio.test.codecs.test_mrcimage.TestMrc.test_read 437s test_same (fabio.test.codecs.test_mrcimage.TestMrc.test_same) 437s see if we can read mrc images and if they are the same as the numpy dump ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.map.bz2') 437s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.mrc.bz2') 437s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.npy.bz2') 437s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.npy.bz2') 437s INFO:fabio.test.codecs.test_mrcimage:Comparing files EMD-3001.map and EMD-3001.npy 437s INFO:fabio.mrcimage:Expected 'MAP ', got INFO:fabio.test.codecs.test_mrcimage:Comparing files 0p67_5s_0000.mrc and 0p67_5s_0000.npy 437s ok 437s INFO:memProf:Time: 0.013s RAM: 0.000 Mb fabio.test.codecs.test_mrcimage.TestMrc.test_same 437s test_file_series (fabio.test.codecs.test_pixiimage.TestPixiImage.test_file_series) ... ok 437s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_file_series 437s test_frames_abort_iteration (fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_abort_iteration) ... ok 437s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_abort_iteration 437s test_frames_full_iteration (fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_full_iteration) ... ok 437s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_full_iteration 437s test_frames_random_access (fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_random_access) ... ok 437s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_random_access 437s test_multi_frame (fabio.test.codecs.test_pixiimage.TestPixiImage.test_multi_frame) ... ok 437s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_multi_frame 437s test_single_frame (fabio.test.codecs.test_pixiimage.TestPixiImage.test_single_frame) ... ok 437s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_single_frame 437s test_data (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_data) ... INFO:fabio.esperantoimage:Esperanto accepts only integer data, rounding 437s INFO:fabio.esperantoimage:Padding image to be square, multiple of 4 and of size between 256 and 4096 437s ok 437s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_data 437s test_header (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('sucrose_1s__1_1.esperanto.bz2') 438s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_4wrneqt2_ubuntu/4bytes_long.esperanto 438s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_4wrneqt2_ubuntu/agi_bitfield.esperanto 440s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.esperanto.bz2') 440s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_4wrneqt2_ubuntu/4bytes_long.esperanto 440s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_4wrneqt2_ubuntu/agi_bitfield.esperanto 440s ok 440s INFO:memProf:Time: 3.276s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_header 440s test_read (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_read) 440s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('sucrose_1s__1_1.esperanto.bz2') 442s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.esperanto.bz2') 442s ok 442s INFO:memProf:Time: 1.873s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_read 442s test_values (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_values) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.esperanto.bz2') 442s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.npy.bz2') 442s ok 442s INFO:memProf:Time: 0.023s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_values 442s test_frames_abort_iteration (fabio.test.codecs.test_limaimage.TestLima.test_frames_abort_iteration) ... ok 442s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_frames_abort_iteration 442s test_frames_full_iteration (fabio.test.codecs.test_limaimage.TestLima.test_frames_full_iteration) ... ok 442s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_frames_full_iteration 442s test_frames_random_access (fabio.test.codecs.test_limaimage.TestLima.test_frames_random_access) ... ok 442s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_frames_random_access 442s test_identify (fabio.test.codecs.test_limaimage.TestLima.test_identify) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('output_sparse_0_00000.h5') 442s ok 442s INFO:memProf:Time: 0.024s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_identify 442s test_open (fabio.test.codecs.test_limaimage.TestLima.test_open) 442s test_open check we can read images from Lima ... ok 442s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_open 442s test_read (fabio.test.codecs.test_limaimage.TestLima.test_read) 442s test_read check we can read images from Lima ... ok 442s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_read 442s test_write (fabio.test.codecs.test_limaimage.TestLima.test_write) ... WARNING:fabio.limaimage:hdf5plugin is needed for bitshuffle-LZ4 compression, falling back on gzip (slower) 442s ok 442s INFO:memProf:Time: 0.010s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_write 442s test_read (fabio.test.codecs.test_hipicimage.TestHiPiCImage.test_read) 442s check we can read dm3 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Radiograph_SP8_BL47XU_HiPicimage.img.bz2') 443s ok 443s INFO:memProf:Time: 1.485s RAM: 0.000 Mb fabio.test.codecs.test_hipicimage.TestHiPiCImage.test_read 443s test_read (fabio.test.codecs.test_binaryimage.TestBinaryImage.test_read) 443s check we can read images from Eiger ... ok 443s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_binaryimage.TestBinaryImage.test_read 443s test_write (fabio.test.codecs.test_binaryimage.TestBinaryImage.test_write) ... ok 443s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_binaryimage.TestBinaryImage.test_write 443s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0001.ccd') 443s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0005.ccd') 443s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0050.ccd') 443s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0059.ccd') 443s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0066.ccd') 443s test_parse (fabio.test.codecs.test_xcaliburimage.TestCcdCharacteristiscs.test_parse) ... ok 443s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_xcaliburimage.TestCcdCharacteristiscs.test_parse 443s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.cbf') 443s test_decomposition (fabio.test.codecs.test_xcaliburimage.testXcalibureImage.test_decomposition) ... WARNING:fabio.test.codecs.test_xcaliburimage:PyFAI not available: only a coarse description of the mask is provided 443s WARNING:fabio.xcaliburimage:PyFAI not available: only a coarse description of the mask is provided 443s ok 443s INFO:memProf:Time: 0.005s RAM: 0.000 Mb fabio.test.codecs.test_xcaliburimage.testXcalibureImage.test_decomposition 443s test_compress_decode_field_overflow (fabio.test.test_agi_bitfield.TestUtil.test_compress_decode_field_overflow) ... ok 443s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_compress_decode_field_overflow 443s test_compress_decompress_field_small (fabio.test.test_agi_bitfield.TestUtil.test_compress_decompress_field_small) ... ok 443s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_compress_decompress_field_small 443s test_full_compress_decompress_field (fabio.test.test_agi_bitfield.TestUtil.test_full_compress_decompress_field) ... ok 443s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_full_compress_decompress_field 443s test_get_fieldsize (fabio.test.test_agi_bitfield.TestUtil.test_get_fieldsize) ... ok 443s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_get_fieldsize 443s test_mask_conv (fabio.test.test_agi_bitfield.TestUtil.test_mask_conv) ... ok 443s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_mask_conv 443s test_compress_row_small (fabio.test.test_agi_bitfield.TestRow.test_compress_row_small) ... ok 443s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestRow.test_compress_row_small 443s test_compress_row_zero (fabio.test.test_agi_bitfield.TestRow.test_compress_row_zero) ... ok 443s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestRow.test_compress_row_zero 444s test_full_rand (fabio.test.test_agi_bitfield.TestCompression.test_full_rand) ... ok 444s INFO:memProf:Time: 0.064s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestCompression.test_full_rand 444s test_cython (fabio.test.test_densification.TestDensification.test_cython) ... ok 444s INFO:memProf:Time: 0.068s RAM: 0.000 Mb fabio.test.test_densification.TestDensification.test_cython 444s test_rng_normal (fabio.test.test_densification.TestDensification.test_rng_normal) ... ok 444s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_densification.TestDensification.test_rng_normal 444s test_rng_uniform (fabio.test.test_densification.TestDensification.test_rng_uniform) ... ok 444s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_densification.TestDensification.test_rng_uniform 444s setUpClass (fabio.test.test_io_limits.TestEdf) ... skipped 'test requires debug level logging' 444s setUpClass (fabio.test.test_io_limits.TestTiff) ... skipped 'test requires debug level logging' 444s test_coverage (fabio.test.test_utils_cli.TestUtilShell.test_coverage) 444s test function coverage 444s /tmp/fabio_4wrneqt2_ubuntu/lima3d.h5 444s /tmp/fabio_4wrneqt2_ubuntu/binary.npy 444s speed-up: 21.706642844629695 444s ##### 0 444s ##### 1 444s ##### 2 444s ##### 3 444s ##### 4 444s ##### 5 444s ##### 6 444s ##### 7 444s aaa [ ] 7% toto aaa [■■■■■■ ] 70% toto aaa [■■■■■■■■■■] 132% toto ... ok 444s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_utils_cli.TestUtilShell.test_coverage 444s test_expand_args (fabio.test.test_utils_cli.TestUtilShell.test_expand_args) ... ok 444s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_utils_cli.TestUtilShell.test_expand_args 444s 444s ---------------------------------------------------------------------- 444s Ran 356 tests in 54.222s 444s 444s OK (skipped=7) 444s autopkgtest [12:22:39]: test command1: -----------------------] 444s autopkgtest [12:22:39]: test command1: - - - - - - - - - - results - - - - - - - - - - 444s command1 PASS 444s autopkgtest [12:22:39]: @@@@@@@@@@@@@@@@@@@@ summary 444s command1 PASS 462s nova [W] Skipping flock for amd64 462s Creating nova instance adt-plucky-amd64-python-fabio-20250219-121515-juju-7f2275-prod-proposed-migration-environment-2-6ec898c6-f36a-453b-8fd8-3540b2b4252a from image adt/ubuntu-plucky-amd64-server-20250218.img (UUID 0c5f6311-785d-4524-a0d8-db541aaf5c09)... 462s nova [W] Timed out waiting for 040f833d-fc35-40fc-a0fd-9feb23d2b7e1 to get deleted.