0s autopkgtest [09:35:36]: starting date and time: 2024-11-15 09:35:36+0000 0s autopkgtest [09:35:36]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [09:35:36]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.11ok466d/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:lxml --apt-upgrade python-fabio --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=lxml/5.3.0-1build1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-7.secgroup --name adt-plucky-amd64-python-fabio-20241115-093536-juju-7f2275-prod-proposed-migration-environment-20-aada3985-6432-4452-bfc2-3011d417a864 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 41s autopkgtest [09:36:17]: testbed dpkg architecture: amd64 41s autopkgtest [09:36:17]: testbed apt version: 2.9.8 41s autopkgtest [09:36:17]: @@@@@@@@@@@@@@@@@@@@ test bed setup 42s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 42s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [95.8 kB] 43s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [1059 kB] 43s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 43s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.5 kB] 43s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [176 kB] 43s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [109 kB] 43s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [32.6 kB] 43s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [835 kB] 43s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [298 kB] 43s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [9416 B] 43s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [740 B] 43s Fetched 2713 kB in 1s (3274 kB/s) 43s Reading package lists... 45s Reading package lists... 46s Building dependency tree... 46s Reading state information... 46s Calculating upgrade... 46s The following packages will be upgraded: 46s firmware-sof-signed grub-common grub-pc grub-pc-bin grub2-common libcap-ng0 46s libexpat1 lxd-installer man-db pastebinit python3-systemd xfsprogs 46s 12 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 46s Need to get 13.6 MB of archives. 46s After this operation, 477 kB of additional disk space will be used. 46s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 firmware-sof-signed all 2024.06-1ubuntu2 [7083 kB] 47s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libcap-ng0 amd64 0.8.5-3build1 [15.6 kB] 47s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libexpat1 amd64 2.6.4-1 [94.9 kB] 47s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 man-db amd64 2.13.0-1 [1352 kB] 47s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 grub2-common amd64 2.12-5ubuntu7 [672 kB] 47s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 grub-pc amd64 2.12-5ubuntu7 [137 kB] 47s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 grub-pc-bin amd64 2.12-5ubuntu7 [1127 kB] 47s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 grub-common amd64 2.12-5ubuntu7 [2110 kB] 47s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 lxd-installer all 9 [5084 B] 47s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 pastebinit all 1.7.1-1 [14.9 kB] 47s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-systemd amd64 235-1build5 [45.7 kB] 47s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 xfsprogs amd64 6.8.0-2.2ubuntu2 [926 kB] 47s Preconfiguring packages ... 47s Fetched 13.6 MB in 1s (12.3 MB/s) 48s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75542 files and directories currently installed.) 48s Preparing to unpack .../firmware-sof-signed_2024.06-1ubuntu2_all.deb ... 48s Unpacking firmware-sof-signed (2024.06-1ubuntu2) over (2024.06-1ubuntu1) ... 48s Preparing to unpack .../libcap-ng0_0.8.5-3build1_amd64.deb ... 48s Unpacking libcap-ng0:amd64 (0.8.5-3build1) over (0.8.5-1) ... 48s Setting up libcap-ng0:amd64 (0.8.5-3build1) ... 48s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75568 files and directories currently installed.) 48s Preparing to unpack .../0-libexpat1_2.6.4-1_amd64.deb ... 48s Unpacking libexpat1:amd64 (2.6.4-1) over (2.6.2-2) ... 48s Preparing to unpack .../1-man-db_2.13.0-1_amd64.deb ... 48s Unpacking man-db (2.13.0-1) over (2.12.1-3) ... 48s Preparing to unpack .../2-grub2-common_2.12-5ubuntu7_amd64.deb ... 48s Unpacking grub2-common (2.12-5ubuntu7) over (2.12-5ubuntu5.1) ... 48s Preparing to unpack .../3-grub-pc_2.12-5ubuntu7_amd64.deb ... 48s Unpacking grub-pc (2.12-5ubuntu7) over (2.12-5ubuntu5.1) ... 48s Preparing to unpack .../4-grub-pc-bin_2.12-5ubuntu7_amd64.deb ... 48s Unpacking grub-pc-bin (2.12-5ubuntu7) over (2.12-5ubuntu5.1) ... 48s Preparing to unpack .../5-grub-common_2.12-5ubuntu7_amd64.deb ... 48s Unpacking grub-common (2.12-5ubuntu7) over (2.12-5ubuntu5.1) ... 48s Preparing to unpack .../6-lxd-installer_9_all.deb ... 48s Unpacking lxd-installer (9) over (8) ... 48s Preparing to unpack .../7-pastebinit_1.7.1-1_all.deb ... 48s Unpacking pastebinit (1.7.1-1) over (1.7.0-1) ... 48s Preparing to unpack .../8-python3-systemd_235-1build5_amd64.deb ... 48s Unpacking python3-systemd (235-1build5) over (235-1build4) ... 48s Preparing to unpack .../9-xfsprogs_6.8.0-2.2ubuntu2_amd64.deb ... 48s Unpacking xfsprogs (6.8.0-2.2ubuntu2) over (6.8.0-2.2ubuntu1) ... 49s Setting up libexpat1:amd64 (2.6.4-1) ... 49s Setting up firmware-sof-signed (2024.06-1ubuntu2) ... 49s Setting up pastebinit (1.7.1-1) ... 49s Setting up man-db (2.13.0-1) ... 49s Updating database of manual pages ... 51s man-db.service is a disabled or a static unit not running, not starting it. 51s Setting up grub-common (2.12-5ubuntu7) ... 51s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults 51s Setting up xfsprogs (6.8.0-2.2ubuntu2) ... 51s update-initramfs: deferring update (trigger activated) 52s Setting up lxd-installer (9) ... 52s Setting up python3-systemd (235-1build5) ... 52s Setting up grub2-common (2.12-5ubuntu7) ... 52s Setting up grub-pc-bin (2.12-5ubuntu7) ... 52s Setting up grub-pc (2.12-5ubuntu7) ... 53s Installing for i386-pc platform. 53s Installation finished. No error reported. 53s Sourcing file `/etc/default/grub' 53s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 53s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 53s Generating grub configuration file ... 53s Found linux image: /boot/vmlinuz-6.11.0-8-generic 53s Found initrd image: /boot/initrd.img-6.11.0-8-generic 53s Warning: os-prober will not be executed to detect other bootable partitions. 53s Systems on them will not be added to the GRUB boot configuration. 53s Check GRUB_DISABLE_OS_PROBER documentation entry. 53s Adding boot menu entry for UEFI Firmware Settings ... 53s done 53s Processing triggers for libc-bin (2.40-1ubuntu3) ... 54s Processing triggers for install-info (7.1.1-1) ... 54s Processing triggers for initramfs-tools (0.142ubuntu34) ... 54s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic 54s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 62s Reading package lists... 62s Building dependency tree... 62s Reading state information... 62s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 63s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 63s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 63s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 63s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 64s Reading package lists... 64s Reading package lists... 64s Building dependency tree... 64s Reading state information... 64s Calculating upgrade... 64s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 64s Reading package lists... 64s Building dependency tree... 64s Reading state information... 65s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 65s autopkgtest [09:36:41]: rebooting testbed after setup commands that affected boot 69s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 85s autopkgtest [09:37:01]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 13:41:20 UTC 2024 87s autopkgtest [09:37:03]: @@@@@@@@@@@@@@@@@@@@ apt-source python-fabio 90s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-fabio 2024.4.0-2 (dsc) [3002 B] 90s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-fabio 2024.4.0-2 (tar) [726 kB] 90s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-fabio 2024.4.0-2 (diff) [9092 B] 90s gpgv: Signature made Mon May 20 16:56:00 2024 UTC 90s gpgv: using RSA key 9B03EBB98300DF97C2B123BFCC8C6BDD1403F4CA 90s gpgv: issuer "roehling@debian.org" 90s gpgv: Can't check signature: No public key 90s dpkg-source: warning: cannot verify inline signature for ./python-fabio_2024.4.0-2.dsc: no acceptable signature found 91s autopkgtest [09:37:07]: testing package python-fabio version 2024.4.0-2 91s autopkgtest [09:37:07]: build not needed 91s autopkgtest [09:37:07]: test command1: preparing testbed 92s Reading package lists... 93s Building dependency tree... 93s Reading state information... 93s Starting pkgProblemResolver with broken count: 0 93s Starting 2 pkgProblemResolver with broken count: 0 93s Done 94s The following additional packages will be installed: 94s blt fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 94s fonts-lyx libaec0 libavahi-client3 libavahi-common-data libavahi-common3 94s libblas3 libcups2t64 libdeflate0 libdouble-conversion3 libdrm-amdgpu1 94s libdrm-intel1 libdrm-radeon1 libegl-mesa0 libegl1 libfontconfig1 libgbm1 94s libgfortran5 libgl1 libgl1-mesa-dri libglapi-mesa libglvnd0 libglx-mesa0 94s libglx0 libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-103-1t64 94s libhdf5-hl-100t64 libice6 libimagequant0 libinput-bin libinput10 libjbig0 94s libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui liblapack3 liblbfgsb0 94s liblcms2-2 liblerc4 liblzf1 libmd4c0 libmtdev1t64 libopenjp2-7 libpciaccess0 94s libpcre2-16-0 libqhull-r8.0 libqt5core5t64 libqt5dbus5t64 libqt5designer5 94s libqt5gui5t64 libqt5help5 libqt5network5t64 libqt5printsupport5t64 94s libqt5sql5t64 libqt5test5t64 libqt5widgets5t64 libqt5xml5t64 libraqm0 94s libsharpyuv0 libsm6 libsz2 libtcl8.6 libtiff6 libtk8.6 libvulkan1 94s libwacom-common libwacom9 libwayland-client0 libwayland-server0 libwebp7 94s libwebpdemux2 libwebpmux3 libx11-xcb1 libxcb-dri2-0 libxcb-dri3-0 94s libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 94s libxcb-randr0 libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 94s libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 94s libxcb-xkb1 libxfixes3 libxft2 libxkbcommon-x11-0 libxrender1 libxshmfence1 94s libxslt1.1 libxss1 libxxf86vm1 mesa-libgallium python-matplotlib-data 94s python3-all python3-appdirs python3-brotli python3-contourpy python3-cycler 94s python3-dateutil python3-decorator python3-fabio python3-fonttools 94s python3-fs python3-h5py python3-h5py-serial python3-kiwisolver python3-lxml 94s python3-lz4 python3-matplotlib python3-mpmath python3-numpy 94s python3-packaging python3-pil python3-pil.imagetk python3-pyqt5 94s python3-pyqt5.sip python3-scipy python3-six python3-sympy python3-tk 94s python3-tz python3-ufolib2 python3.12-tk tk8.6-blt2.5 unicode-data 94s x11-common 94s Suggested packages: 94s blt-demo cups-common libjs-jquery-ui-docs liblcms2-utils libthai0 94s qgnomeplatform-qt5 qt5-image-formats-plugins tcl8.6 tk8.6 libwacom-bin 94s python-cycler-doc python-fabio-doc python-h5py-doc python-lxml-doc 94s cm-super-minimal dvipng ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0 94s inkscape ipython3 librsvg2-common python-matplotlib-doc python3-cairocffi 94s python3-gi-cairo python3-gobject python3-sip python3-tornado 94s texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2 gcc 94s gfortran python-numpy-doc python3-dev python3-pytest python-pil-doc 94s python-scipy-doc texlive-fonts-extra python-sympy-doc tix python3-tk-dbg 94s python3.13-tk 94s Recommended packages: 94s libgl1-amber-dri javascript-common qttranslations5-l10n libqt5svg5 94s qt5-gtk-platformtheme qtwayland5 libqt5sql5-sqlite | libqt5sql5-mysql 94s | libqt5sql5-odbc | libqt5sql5-psql | libqt5sql5-tds | libqt5sql5-ibase 94s mesa-vulkan-drivers | vulkan-icd python3-bs4 python3-cssselect 94s python3-html5lib python3-olefile g++ | c++-compiler isympy-common 94s The following NEW packages will be installed: 94s autopkgtest-satdep blt fontconfig fontconfig-config fonts-dejavu-core 94s fonts-dejavu-mono fonts-lyx libaec0 libavahi-client3 libavahi-common-data 94s libavahi-common3 libblas3 libcups2t64 libdeflate0 libdouble-conversion3 94s libdrm-amdgpu1 libdrm-intel1 libdrm-radeon1 libegl-mesa0 libegl1 94s libfontconfig1 libgbm1 libgfortran5 libgl1 libgl1-mesa-dri libglapi-mesa 94s libglvnd0 libglx-mesa0 libglx0 libgomp1 libgraphite2-3 libharfbuzz0b 94s libhdf5-103-1t64 libhdf5-hl-100t64 libice6 libimagequant0 libinput-bin 94s libinput10 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui 94s liblapack3 liblbfgsb0 liblcms2-2 liblerc4 liblzf1 libmd4c0 libmtdev1t64 94s libopenjp2-7 libpciaccess0 libpcre2-16-0 libqhull-r8.0 libqt5core5t64 94s libqt5dbus5t64 libqt5designer5 libqt5gui5t64 libqt5help5 libqt5network5t64 94s libqt5printsupport5t64 libqt5sql5t64 libqt5test5t64 libqt5widgets5t64 94s libqt5xml5t64 libraqm0 libsharpyuv0 libsm6 libsz2 libtcl8.6 libtiff6 94s libtk8.6 libvulkan1 libwacom-common libwacom9 libwayland-client0 94s libwayland-server0 libwebp7 libwebpdemux2 libwebpmux3 libx11-xcb1 94s libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 94s libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0 94s libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 94s libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxfixes3 94s libxft2 libxkbcommon-x11-0 libxrender1 libxshmfence1 libxslt1.1 libxss1 94s libxxf86vm1 mesa-libgallium python-matplotlib-data python3-all 94s python3-appdirs python3-brotli python3-contourpy python3-cycler 94s python3-dateutil python3-decorator python3-fabio python3-fonttools 94s python3-fs python3-h5py python3-h5py-serial python3-kiwisolver python3-lxml 94s python3-lz4 python3-matplotlib python3-mpmath python3-numpy 94s python3-packaging python3-pil python3-pil.imagetk python3-pyqt5 94s python3-pyqt5.sip python3-scipy python3-six python3-sympy python3-tk 94s python3-tz python3-ufolib2 python3.12-tk tk8.6-blt2.5 unicode-data 94s x11-common 94s 0 upgraded, 142 newly installed, 0 to remove and 0 not upgraded. 94s Need to get 91.0 MB/91.0 MB of archives. 94s After this operation, 370 MB of additional disk space will be used. 94s Get:1 /tmp/autopkgtest.7BUbnB/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [724 B] 94s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.15+dfsg-2 [1085 kB] 94s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 94s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 95s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB] 95s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB] 95s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 95s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 95s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 95s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 95s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.15-1 [862 kB] 95s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7build1 [630 kB] 95s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 blt amd64 2.5.3+dfsg-7build1 [4840 B] 95s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB] 95s Get:15 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-lyx all 2.4.2.1-1 [171 kB] 95s Get:16 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 95s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libavahi-common-data amd64 0.8-13ubuntu6 [29.7 kB] 95s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 libavahi-common3 amd64 0.8-13ubuntu6 [23.3 kB] 95s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libavahi-client3 amd64 0.8-13ubuntu6 [26.8 kB] 95s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-3build2 [247 kB] 95s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libcups2t64 amd64 2.4.10-1ubuntu2 [271 kB] 95s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.22-1 [64.5 kB] 95s Get:23 http://ftpmaster.internal/ubuntu plucky/universe amd64 libdouble-conversion3 amd64 3.3.0-1build1 [40.3 kB] 95s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libdrm-amdgpu1 amd64 2.4.123-1 [21.7 kB] 95s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libpciaccess0 amd64 0.17-3build1 [18.6 kB] 95s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libdrm-intel1 amd64 2.4.123-1 [68.8 kB] 95s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libdrm-radeon1 amd64 2.4.123-1 [25.3 kB] 95s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libwayland-server0 amd64 1.23.0-1 [35.1 kB] 95s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-randr0 amd64 1.17.0-2 [17.9 kB] 95s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libglapi-mesa amd64 24.2.3-1ubuntu1 [42.4 kB] 95s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libx11-xcb1 amd64 2:1.8.10-2 [7944 B] 95s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-dri2-0 amd64 1.17.0-2 [7222 B] 95s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-dri3-0 amd64 1.17.0-2 [7508 B] 95s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-present0 amd64 1.17.0-2 [6064 B] 95s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-sync1 amd64 1.17.0-2 [9312 B] 95s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-xfixes0 amd64 1.17.0-2 [10.2 kB] 95s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libxshmfence1 amd64 1.3-1build5 [4764 B] 95s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 mesa-libgallium amd64 24.2.3-1ubuntu1 [9904 kB] 96s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libgbm1 amd64 24.2.3-1ubuntu1 [32.0 kB] 96s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libwayland-client0 amd64 1.23.0-1 [27.1 kB] 96s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 96s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libegl-mesa0 amd64 24.2.3-1ubuntu1 [129 kB] 96s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-8ubuntu1 [909 kB] 96s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libvulkan1 amd64 1.3.296.0-1 [143 kB] 96s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libgl1-mesa-dri amd64 24.2.3-1ubuntu1 [34.4 kB] 96s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-glx0 amd64 1.17.0-2 [24.8 kB] 96s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libxfixes3 amd64 1:6.0.0-2build1 [10.8 kB] 96s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libxxf86vm1 amd64 1:1.1.4-1build4 [9282 B] 96s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libglx-mesa0 amd64 24.2.3-1ubuntu1 [153 kB] 96s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-8ubuntu1 [148 kB] 96s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 96s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.0.1-1 [540 kB] 96s Get:53 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 96s Get:54 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-103-1t64 amd64 1.10.10+repack-4ubuntu3 [1280 kB] 96s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-4ubuntu3 [56.6 kB] 96s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 96s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libimagequant0 amd64 2.18.0-1build1 [36.3 kB] 96s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libwacom-common all 2.13.0-1 [98.6 kB] 96s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libwacom9 amd64 2.13.0-1 [25.1 kB] 96s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libinput-bin amd64 1.26.2-1 [22.8 kB] 96s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libmtdev1t64 amd64 1.1.6-1.2 [14.4 kB] 96s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libinput10 amd64 1.26.2-1 [137 kB] 96s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-2ubuntu2 [150 kB] 96s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 96s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 96s Get:66 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 96s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-3build2 [2668 kB] 96s Get:68 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblbfgsb0 amd64 3.0+dfsg.4-1build1 [29.9 kB] 96s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 liblcms2-2 amd64 2.16-2 [212 kB] 96s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-4ubuntu2 [179 kB] 96s Get:71 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblzf1 amd64 3.6-4 [7624 B] 96s Get:72 http://ftpmaster.internal/ubuntu plucky/universe amd64 libmd4c0 amd64 0.5.2-2 [50.1 kB] 96s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.42-4ubuntu3 [214 kB] 96s Get:74 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqhull-r8.0 amd64 2020.2-6build1 [193 kB] 96s Get:75 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5core5t64 amd64 5.15.15+dfsg-1ubuntu1 [2036 kB] 96s Get:76 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5dbus5t64 amd64 5.15.15+dfsg-1ubuntu1 [221 kB] 96s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libglvnd0 amd64 1.7.0-1build1 [69.6 kB] 96s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libegl1 amd64 1.7.0-1build1 [28.7 kB] 96s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 libglx0 amd64 1.7.0-1build1 [38.6 kB] 96s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 libgl1 amd64 1.7.0-1build1 [102 kB] 96s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5network5t64 amd64 5.15.15+dfsg-1ubuntu1 [724 kB] 96s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 96s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-icccm4 amd64 0.4.2-1 [11.1 kB] 96s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-util1 amd64 0.4.0-1build3 [10.7 kB] 96s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-image0 amd64 0.4.0-2build1 [10.8 kB] 96s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-keysyms1 amd64 0.4.0-1build4 [7956 B] 96s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 96s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render-util0 amd64 0.3.9-1build4 [9608 B] 96s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shape0 amd64 1.17.0-2 [6092 B] 96s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-xinerama0 amd64 1.17.0-2 [5412 B] 96s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-xinput0 amd64 1.17.0-2 [33.2 kB] 96s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-xkb1 amd64 1.17.0-2 [32.3 kB] 96s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 libxkbcommon-x11-0 amd64 1.6.0-1build1 [14.5 kB] 96s Get:94 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5gui5t64 amd64 5.15.15+dfsg-1ubuntu1 [3791 kB] 96s Get:95 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5widgets5t64 amd64 5.15.15+dfsg-1ubuntu1 [2561 kB] 97s Get:96 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5xml5t64 amd64 5.15.15+dfsg-1ubuntu1 [124 kB] 97s Get:97 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5designer5 amd64 5.15.15-2 [2827 kB] 97s Get:98 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5sql5t64 amd64 5.15.15+dfsg-1ubuntu1 [122 kB] 97s Get:99 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5help5 amd64 5.15.15-2 [161 kB] 97s Get:100 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5printsupport5t64 amd64 5.15.15+dfsg-1ubuntu1 [208 kB] 97s Get:101 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5test5t64 amd64 5.15.15+dfsg-1ubuntu1 [149 kB] 97s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libraqm0 amd64 0.10.1-1build1 [15.0 kB] 97s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [17.5 kB] 97s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 97s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.4.0-0.1 [231 kB] 97s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 97s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebpdemux2 amd64 1.4.0-0.1 [12.4 kB] 97s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebpmux3 amd64 1.4.0-0.1 [25.8 kB] 97s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 libxslt1.1 amd64 1.1.39-0exp1ubuntu1 [169 kB] 97s Get:110 http://ftpmaster.internal/ubuntu plucky/universe amd64 python-matplotlib-data all 3.8.3-3 [2928 kB] 97s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-all amd64 3.12.6-0ubuntu1 [886 B] 97s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-appdirs all 1.4.4-4 [10.9 kB] 97s Get:113 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-brotli amd64 1.1.0-2build2 [332 kB] 97s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-numpy amd64 1:1.26.4+ds-11build1 [4479 kB] 98s Get:115 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-contourpy amd64 1.3.0-2 [217 kB] 98s Get:116 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-cycler all 0.12.1-1 [9716 B] 98s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-six all 1.16.0-7 [13.1 kB] 98s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dateutil all 2.9.0-2 [80.3 kB] 98s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-decorator all 5.1.1-5 [10.1 kB] 98s Get:120 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-scipy amd64 1.13.1-5 [18.2 MB] 98s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-ufolib2 all 0.16.1+dfsg1-1 [33.4 kB] 98s Get:122 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-mpmath all 1.3.0-1 [425 kB] 98s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-sympy all 1.13.3-1 [4228 kB] 98s Get:124 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-tz all 2024.1-2 [31.4 kB] 98s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-fs all 2.4.16-4 [91.3 kB] 98s Get:126 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-lxml amd64 5.3.0-1build1 [1834 kB] 98s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-lz4 amd64 4.0.2+dfsg-1build4 [26.2 kB] 98s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 unicode-data all 15.1.0-1 [8878 kB] 99s Get:129 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-fonttools amd64 4.46.0-1build2 [1436 kB] 99s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-h5py-serial amd64 3.11.0-5ubuntu1 [1107 kB] 99s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-h5py all 3.11.0-5ubuntu1 [7974 B] 99s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-kiwisolver amd64 1.4.7-2build1 [70.3 kB] 99s Get:133 http://ftpmaster.internal/ubuntu plucky/main amd64 libopenjp2-7 amd64 2.5.0-2ubuntu1 [184 kB] 99s Get:134 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-pil amd64 10.4.0-1ubuntu1 [463 kB] 99s Get:135 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12-tk amd64 3.12.7-3 [116 kB] 99s Get:136 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-tk amd64 3.12.6-1ubuntu1 [9806 B] 99s Get:137 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pil.imagetk amd64 10.4.0-1ubuntu1 [9394 B] 99s Get:138 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-packaging all 24.1-1 [41.4 kB] 99s Get:139 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-matplotlib amd64 3.8.3-3 [4545 kB] 99s Get:140 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyqt5.sip amd64 12.15.0-1build1 [78.3 kB] 99s Get:141 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyqt5 amd64 5.15.11+dfsg-1build1 [2726 kB] 99s Get:142 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-fabio amd64 2024.4.0-2 [629 kB] 100s Fetched 91.0 MB in 6s (16.5 MB/s) 100s Selecting previously unselected package libtcl8.6:amd64. 100s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75575 files and directories currently installed.) 100s Preparing to unpack .../000-libtcl8.6_8.6.15+dfsg-2_amd64.deb ... 100s Unpacking libtcl8.6:amd64 (8.6.15+dfsg-2) ... 100s Selecting previously unselected package fonts-dejavu-mono. 100s Preparing to unpack .../001-fonts-dejavu-mono_2.37-8_all.deb ... 100s Unpacking fonts-dejavu-mono (2.37-8) ... 100s Selecting previously unselected package fonts-dejavu-core. 100s Preparing to unpack .../002-fonts-dejavu-core_2.37-8_all.deb ... 100s Unpacking fonts-dejavu-core (2.37-8) ... 100s Selecting previously unselected package fontconfig-config. 100s Preparing to unpack .../003-fontconfig-config_2.15.0-1.1ubuntu2_amd64.deb ... 100s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 100s Selecting previously unselected package libfontconfig1:amd64. 100s Preparing to unpack .../004-libfontconfig1_2.15.0-1.1ubuntu2_amd64.deb ... 100s Unpacking libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ... 100s Selecting previously unselected package libxrender1:amd64. 100s Preparing to unpack .../005-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 100s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 100s Selecting previously unselected package libxft2:amd64. 100s Preparing to unpack .../006-libxft2_2.3.6-1build1_amd64.deb ... 100s Unpacking libxft2:amd64 (2.3.6-1build1) ... 100s Selecting previously unselected package x11-common. 100s Preparing to unpack .../007-x11-common_1%3a7.7+23ubuntu3_all.deb ... 100s Unpacking x11-common (1:7.7+23ubuntu3) ... 100s Selecting previously unselected package libxss1:amd64. 100s Preparing to unpack .../008-libxss1_1%3a1.2.3-1build3_amd64.deb ... 100s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 101s Selecting previously unselected package libtk8.6:amd64. 101s Preparing to unpack .../009-libtk8.6_8.6.15-1_amd64.deb ... 101s Unpacking libtk8.6:amd64 (8.6.15-1) ... 101s Selecting previously unselected package tk8.6-blt2.5. 101s Preparing to unpack .../010-tk8.6-blt2.5_2.5.3+dfsg-7build1_amd64.deb ... 101s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 101s Selecting previously unselected package blt. 101s Preparing to unpack .../011-blt_2.5.3+dfsg-7build1_amd64.deb ... 101s Unpacking blt (2.5.3+dfsg-7build1) ... 101s Selecting previously unselected package fontconfig. 101s Preparing to unpack .../012-fontconfig_2.15.0-1.1ubuntu2_amd64.deb ... 101s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 101s Selecting previously unselected package fonts-lyx. 101s Preparing to unpack .../013-fonts-lyx_2.4.2.1-1_all.deb ... 101s Unpacking fonts-lyx (2.4.2.1-1) ... 101s Selecting previously unselected package libaec0:amd64. 101s Preparing to unpack .../014-libaec0_1.1.3-1_amd64.deb ... 101s Unpacking libaec0:amd64 (1.1.3-1) ... 101s Selecting previously unselected package libavahi-common-data:amd64. 101s Preparing to unpack .../015-libavahi-common-data_0.8-13ubuntu6_amd64.deb ... 101s Unpacking libavahi-common-data:amd64 (0.8-13ubuntu6) ... 101s Selecting previously unselected package libavahi-common3:amd64. 101s Preparing to unpack .../016-libavahi-common3_0.8-13ubuntu6_amd64.deb ... 101s Unpacking libavahi-common3:amd64 (0.8-13ubuntu6) ... 101s Selecting previously unselected package libavahi-client3:amd64. 101s Preparing to unpack .../017-libavahi-client3_0.8-13ubuntu6_amd64.deb ... 101s Unpacking libavahi-client3:amd64 (0.8-13ubuntu6) ... 101s Selecting previously unselected package libblas3:amd64. 101s Preparing to unpack .../018-libblas3_3.12.0-3build2_amd64.deb ... 101s Unpacking libblas3:amd64 (3.12.0-3build2) ... 101s Selecting previously unselected package libcups2t64:amd64. 101s Preparing to unpack .../019-libcups2t64_2.4.10-1ubuntu2_amd64.deb ... 101s Unpacking libcups2t64:amd64 (2.4.10-1ubuntu2) ... 101s Selecting previously unselected package libdeflate0:amd64. 101s Preparing to unpack .../020-libdeflate0_1.22-1_amd64.deb ... 101s Unpacking libdeflate0:amd64 (1.22-1) ... 101s Selecting previously unselected package libdouble-conversion3:amd64. 101s Preparing to unpack .../021-libdouble-conversion3_3.3.0-1build1_amd64.deb ... 101s Unpacking libdouble-conversion3:amd64 (3.3.0-1build1) ... 101s Selecting previously unselected package libdrm-amdgpu1:amd64. 101s Preparing to unpack .../022-libdrm-amdgpu1_2.4.123-1_amd64.deb ... 101s Unpacking libdrm-amdgpu1:amd64 (2.4.123-1) ... 101s Selecting previously unselected package libpciaccess0:amd64. 101s Preparing to unpack .../023-libpciaccess0_0.17-3build1_amd64.deb ... 101s Unpacking libpciaccess0:amd64 (0.17-3build1) ... 101s Selecting previously unselected package libdrm-intel1:amd64. 101s Preparing to unpack .../024-libdrm-intel1_2.4.123-1_amd64.deb ... 101s Unpacking libdrm-intel1:amd64 (2.4.123-1) ... 101s Selecting previously unselected package libdrm-radeon1:amd64. 101s Preparing to unpack .../025-libdrm-radeon1_2.4.123-1_amd64.deb ... 101s Unpacking libdrm-radeon1:amd64 (2.4.123-1) ... 101s Selecting previously unselected package libwayland-server0:amd64. 101s Preparing to unpack .../026-libwayland-server0_1.23.0-1_amd64.deb ... 101s Unpacking libwayland-server0:amd64 (1.23.0-1) ... 101s Selecting previously unselected package libxcb-randr0:amd64. 101s Preparing to unpack .../027-libxcb-randr0_1.17.0-2_amd64.deb ... 101s Unpacking libxcb-randr0:amd64 (1.17.0-2) ... 101s Selecting previously unselected package libglapi-mesa:amd64. 101s Preparing to unpack .../028-libglapi-mesa_24.2.3-1ubuntu1_amd64.deb ... 101s Unpacking libglapi-mesa:amd64 (24.2.3-1ubuntu1) ... 101s Selecting previously unselected package libx11-xcb1:amd64. 101s Preparing to unpack .../029-libx11-xcb1_2%3a1.8.10-2_amd64.deb ... 101s Unpacking libx11-xcb1:amd64 (2:1.8.10-2) ... 101s Selecting previously unselected package libxcb-dri2-0:amd64. 101s Preparing to unpack .../030-libxcb-dri2-0_1.17.0-2_amd64.deb ... 101s Unpacking libxcb-dri2-0:amd64 (1.17.0-2) ... 101s Selecting previously unselected package libxcb-dri3-0:amd64. 101s Preparing to unpack .../031-libxcb-dri3-0_1.17.0-2_amd64.deb ... 101s Unpacking libxcb-dri3-0:amd64 (1.17.0-2) ... 101s Selecting previously unselected package libxcb-present0:amd64. 101s Preparing to unpack .../032-libxcb-present0_1.17.0-2_amd64.deb ... 101s Unpacking libxcb-present0:amd64 (1.17.0-2) ... 101s Selecting previously unselected package libxcb-sync1:amd64. 101s Preparing to unpack .../033-libxcb-sync1_1.17.0-2_amd64.deb ... 101s 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previously unselected package libxcb-glx0:amd64. 101s Preparing to unpack .../044-libxcb-glx0_1.17.0-2_amd64.deb ... 101s Unpacking libxcb-glx0:amd64 (1.17.0-2) ... 101s Selecting previously unselected package libxfixes3:amd64. 101s Preparing to unpack .../045-libxfixes3_1%3a6.0.0-2build1_amd64.deb ... 101s Unpacking libxfixes3:amd64 (1:6.0.0-2build1) ... 101s Selecting previously unselected package libxxf86vm1:amd64. 101s Preparing to unpack .../046-libxxf86vm1_1%3a1.1.4-1build4_amd64.deb ... 101s Unpacking libxxf86vm1:amd64 (1:1.1.4-1build4) ... 101s Selecting previously unselected package libglx-mesa0:amd64. 101s Preparing to unpack .../047-libglx-mesa0_24.2.3-1ubuntu1_amd64.deb ... 101s Unpacking libglx-mesa0:amd64 (24.2.3-1ubuntu1) ... 101s Selecting previously unselected package libgomp1:amd64. 101s Preparing to unpack .../048-libgomp1_14.2.0-8ubuntu1_amd64.deb ... 101s Unpacking libgomp1:amd64 (14.2.0-8ubuntu1) ... 101s Selecting previously unselected package 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package libice6:amd64. 102s Preparing to unpack .../054-libice6_2%3a1.1.1-1_amd64.deb ... 102s Unpacking libice6:amd64 (2:1.1.1-1) ... 102s Selecting previously unselected package libimagequant0:amd64. 102s Preparing to unpack .../055-libimagequant0_2.18.0-1build1_amd64.deb ... 102s Unpacking libimagequant0:amd64 (2.18.0-1build1) ... 102s Selecting previously unselected package libwacom-common. 102s Preparing to unpack .../056-libwacom-common_2.13.0-1_all.deb ... 102s Unpacking libwacom-common (2.13.0-1) ... 102s Selecting previously unselected package libwacom9:amd64. 102s Preparing to unpack .../057-libwacom9_2.13.0-1_amd64.deb ... 102s Unpacking libwacom9:amd64 (2.13.0-1) ... 102s Selecting previously unselected package libinput-bin. 102s Preparing to unpack .../058-libinput-bin_1.26.2-1_amd64.deb ... 102s Unpacking libinput-bin (1.26.2-1) ... 102s Selecting previously unselected package libmtdev1t64:amd64. 102s Preparing to unpack .../059-libmtdev1t64_1.1.6-1.2_amd64.deb ... 102s 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previously unselected package liblapack3:amd64. 102s Preparing to unpack .../065-liblapack3_3.12.0-3build2_amd64.deb ... 102s Unpacking liblapack3:amd64 (3.12.0-3build2) ... 102s Selecting previously unselected package liblbfgsb0:amd64. 102s Preparing to unpack .../066-liblbfgsb0_3.0+dfsg.4-1build1_amd64.deb ... 102s Unpacking liblbfgsb0:amd64 (3.0+dfsg.4-1build1) ... 102s Selecting previously unselected package liblcms2-2:amd64. 102s Preparing to unpack .../067-liblcms2-2_2.16-2_amd64.deb ... 102s Unpacking liblcms2-2:amd64 (2.16-2) ... 102s Selecting previously unselected package liblerc4:amd64. 102s Preparing to unpack .../068-liblerc4_4.0.0+ds-4ubuntu2_amd64.deb ... 102s Unpacking liblerc4:amd64 (4.0.0+ds-4ubuntu2) ... 102s Selecting previously unselected package liblzf1:amd64. 102s Preparing to unpack .../069-liblzf1_3.6-4_amd64.deb ... 102s Unpacking liblzf1:amd64 (3.6-4) ... 102s Selecting previously unselected package libmd4c0:amd64. 102s Preparing to unpack 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libsm6:amd64 (2:1.2.4-1) ... 103s Selecting previously unselected package libxcb-icccm4:amd64. 103s Preparing to unpack .../081-libxcb-icccm4_0.4.2-1_amd64.deb ... 103s Unpacking libxcb-icccm4:amd64 (0.4.2-1) ... 103s Selecting previously unselected package libxcb-util1:amd64. 103s Preparing to unpack .../082-libxcb-util1_0.4.0-1build3_amd64.deb ... 103s Unpacking libxcb-util1:amd64 (0.4.0-1build3) ... 103s Selecting previously unselected package libxcb-image0:amd64. 103s Preparing to unpack .../083-libxcb-image0_0.4.0-2build1_amd64.deb ... 103s Unpacking libxcb-image0:amd64 (0.4.0-2build1) ... 103s Selecting previously unselected package libxcb-keysyms1:amd64. 103s Preparing to unpack .../084-libxcb-keysyms1_0.4.0-1build4_amd64.deb ... 103s Unpacking libxcb-keysyms1:amd64 (0.4.0-1build4) ... 103s Selecting previously unselected package libxcb-render0:amd64. 103s Preparing to unpack .../085-libxcb-render0_1.17.0-2_amd64.deb ... 103s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 103s 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package libxkbcommon-x11-0:amd64. 103s Preparing to unpack .../091-libxkbcommon-x11-0_1.6.0-1build1_amd64.deb ... 103s Unpacking libxkbcommon-x11-0:amd64 (1.6.0-1build1) ... 103s Selecting previously unselected package libqt5gui5t64:amd64. 103s Preparing to unpack .../092-libqt5gui5t64_5.15.15+dfsg-1ubuntu1_amd64.deb ... 103s Unpacking libqt5gui5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 103s Selecting previously unselected package libqt5widgets5t64:amd64. 103s Preparing to unpack .../093-libqt5widgets5t64_5.15.15+dfsg-1ubuntu1_amd64.deb ... 103s Unpacking libqt5widgets5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 103s Selecting previously unselected package libqt5xml5t64:amd64. 103s Preparing to unpack .../094-libqt5xml5t64_5.15.15+dfsg-1ubuntu1_amd64.deb ... 103s Unpacking libqt5xml5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 103s Selecting previously unselected package libqt5designer5:amd64. 103s Preparing to unpack .../095-libqt5designer5_5.15.15-2_amd64.deb ... 103s Unpacking libqt5designer5:amd64 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Unpacking libraqm0:amd64 (0.10.1-1build1) ... 103s Selecting previously unselected package libsharpyuv0:amd64. 103s Preparing to unpack .../101-libsharpyuv0_1.4.0-0.1_amd64.deb ... 103s Unpacking libsharpyuv0:amd64 (1.4.0-0.1) ... 103s Selecting previously unselected package libjbig0:amd64. 103s Preparing to unpack .../102-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 103s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 103s Selecting previously unselected package libwebp7:amd64. 103s Preparing to unpack .../103-libwebp7_1.4.0-0.1_amd64.deb ... 103s Unpacking libwebp7:amd64 (1.4.0-0.1) ... 103s Selecting previously unselected package libtiff6:amd64. 103s Preparing to unpack .../104-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ... 103s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 103s Selecting previously unselected package libwebpdemux2:amd64. 103s Preparing to unpack .../105-libwebpdemux2_1.4.0-0.1_amd64.deb ... 103s Unpacking libwebpdemux2:amd64 (1.4.0-0.1) ... 104s Selecting previously unselected package libwebpmux3:amd64. 104s Preparing to unpack .../106-libwebpmux3_1.4.0-0.1_amd64.deb ... 104s Unpacking libwebpmux3:amd64 (1.4.0-0.1) ... 104s Selecting previously unselected package libxslt1.1:amd64. 104s Preparing to unpack .../107-libxslt1.1_1.1.39-0exp1ubuntu1_amd64.deb ... 104s Unpacking libxslt1.1:amd64 (1.1.39-0exp1ubuntu1) ... 104s Selecting previously unselected package python-matplotlib-data. 104s Preparing to unpack .../108-python-matplotlib-data_3.8.3-3_all.deb ... 104s Unpacking python-matplotlib-data (3.8.3-3) ... 104s Selecting previously unselected package python3-all. 104s Preparing to unpack .../109-python3-all_3.12.6-0ubuntu1_amd64.deb ... 104s Unpacking python3-all (3.12.6-0ubuntu1) ... 104s Selecting previously unselected package python3-appdirs. 104s Preparing to unpack .../110-python3-appdirs_1.4.4-4_all.deb ... 104s Unpacking python3-appdirs (1.4.4-4) ... 104s Selecting previously unselected package python3-brotli. 104s Preparing to unpack .../111-python3-brotli_1.1.0-2build2_amd64.deb ... 104s Unpacking python3-brotli (1.1.0-2build2) ... 104s Selecting previously unselected package python3-numpy. 104s Preparing to unpack .../112-python3-numpy_1%3a1.26.4+ds-11build1_amd64.deb ... 104s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 104s Selecting previously unselected package python3-contourpy. 104s Preparing to unpack .../113-python3-contourpy_1.3.0-2_amd64.deb ... 104s Unpacking python3-contourpy (1.3.0-2) ... 104s Selecting previously unselected package python3-cycler. 104s Preparing to unpack .../114-python3-cycler_0.12.1-1_all.deb ... 104s Unpacking python3-cycler (0.12.1-1) ... 104s Selecting previously unselected package python3-six. 104s Preparing to unpack .../115-python3-six_1.16.0-7_all.deb ... 104s Unpacking python3-six (1.16.0-7) ... 104s Selecting previously unselected package python3-dateutil. 104s Preparing to unpack .../116-python3-dateutil_2.9.0-2_all.deb ... 104s Unpacking python3-dateutil 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.../122-python3-tz_2024.1-2_all.deb ... 105s Unpacking python3-tz (2024.1-2) ... 105s Selecting previously unselected package python3-fs. 105s Preparing to unpack .../123-python3-fs_2.4.16-4_all.deb ... 105s Unpacking python3-fs (2.4.16-4) ... 105s Selecting previously unselected package python3-lxml:amd64. 105s Preparing to unpack .../124-python3-lxml_5.3.0-1build1_amd64.deb ... 105s Unpacking python3-lxml:amd64 (5.3.0-1build1) ... 105s Selecting previously unselected package python3-lz4. 105s Preparing to unpack .../125-python3-lz4_4.0.2+dfsg-1build4_amd64.deb ... 105s Unpacking python3-lz4 (4.0.2+dfsg-1build4) ... 105s Selecting previously unselected package unicode-data. 105s Preparing to unpack .../126-unicode-data_15.1.0-1_all.deb ... 105s Unpacking unicode-data (15.1.0-1) ... 105s Selecting previously unselected package python3-fonttools. 105s Preparing to unpack .../127-python3-fonttools_4.46.0-1build2_amd64.deb ... 105s Unpacking python3-fonttools (4.46.0-1build2) ... 105s Selecting previously unselected package python3-h5py-serial. 105s Preparing to unpack .../128-python3-h5py-serial_3.11.0-5ubuntu1_amd64.deb ... 105s Unpacking python3-h5py-serial (3.11.0-5ubuntu1) ... 105s Selecting previously unselected package python3-h5py. 105s Preparing to unpack .../129-python3-h5py_3.11.0-5ubuntu1_all.deb ... 105s Unpacking python3-h5py (3.11.0-5ubuntu1) ... 105s Selecting previously unselected package python3-kiwisolver. 105s Preparing to unpack .../130-python3-kiwisolver_1.4.7-2build1_amd64.deb ... 105s Unpacking python3-kiwisolver (1.4.7-2build1) ... 105s Selecting previously unselected package libopenjp2-7:amd64. 105s Preparing to unpack .../131-libopenjp2-7_2.5.0-2ubuntu1_amd64.deb ... 105s Unpacking libopenjp2-7:amd64 (2.5.0-2ubuntu1) ... 105s Selecting previously unselected package python3-pil:amd64. 105s Preparing to unpack .../132-python3-pil_10.4.0-1ubuntu1_amd64.deb ... 105s Unpacking python3-pil:amd64 (10.4.0-1ubuntu1) ... 105s Selecting previously unselected package python3.12-tk. 105s Preparing to unpack .../133-python3.12-tk_3.12.7-3_amd64.deb ... 105s Unpacking python3.12-tk (3.12.7-3) ... 105s Selecting previously unselected package python3-tk:amd64. 105s Preparing to unpack .../134-python3-tk_3.12.6-1ubuntu1_amd64.deb ... 105s Unpacking python3-tk:amd64 (3.12.6-1ubuntu1) ... 105s Selecting previously unselected package python3-pil.imagetk:amd64. 105s Preparing to unpack .../135-python3-pil.imagetk_10.4.0-1ubuntu1_amd64.deb ... 105s Unpacking python3-pil.imagetk:amd64 (10.4.0-1ubuntu1) ... 105s Selecting previously unselected package python3-packaging. 105s Preparing to unpack .../136-python3-packaging_24.1-1_all.deb ... 105s Unpacking python3-packaging (24.1-1) ... 105s Selecting previously unselected package python3-matplotlib. 105s Preparing to unpack .../137-python3-matplotlib_3.8.3-3_amd64.deb ... 105s Unpacking python3-matplotlib (3.8.3-3) ... 105s Selecting previously unselected package python3-pyqt5.sip. 106s Preparing to unpack .../138-python3-pyqt5.sip_12.15.0-1build1_amd64.deb ... 106s Unpacking python3-pyqt5.sip (12.15.0-1build1) ... 106s Selecting previously unselected package python3-pyqt5. 106s Preparing to unpack .../139-python3-pyqt5_5.15.11+dfsg-1build1_amd64.deb ... 106s Unpacking python3-pyqt5 (5.15.11+dfsg-1build1) ... 106s Selecting previously unselected package python3-fabio. 106s Preparing to unpack .../140-python3-fabio_2024.4.0-2_amd64.deb ... 106s Unpacking python3-fabio (2024.4.0-2) ... 106s Selecting previously unselected package autopkgtest-satdep. 106s Preparing to unpack .../141-1-autopkgtest-satdep.deb ... 106s Unpacking autopkgtest-satdep (0) ... 106s Setting up libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 106s Setting up libxcb-dri3-0:amd64 (1.17.0-2) ... 106s Setting up liblcms2-2:amd64 (2.16-2) ... 106s Setting up libsharpyuv0:amd64 (1.4.0-0.1) ... 106s Setting up libwayland-server0:amd64 (1.23.0-1) ... 106s Setting up libx11-xcb1:amd64 (2:1.8.10-2) ... 106s Setting up libpciaccess0:amd64 (0.17-3build1) ... 106s Setting up libdouble-conversion3:amd64 (3.3.0-1build1) ... 106s Setting up libxcb-xfixes0:amd64 (1.17.0-2) ... 106s Setting up liblerc4:amd64 (4.0.0+ds-4ubuntu2) ... 106s Setting up libxcb-xinput0:amd64 (1.17.0-2) ... 106s Setting up libxrender1:amd64 (1:0.9.10-1.1build1) ... 106s Setting up python3-lz4 (4.0.2+dfsg-1build4) ... 106s Setting up libxcb-render0:amd64 (1.17.0-2) ... 106s Setting up libdrm-radeon1:amd64 (2.4.123-1) ... 106s Setting up libglvnd0:amd64 (1.7.0-1build1) ... 106s Setting up fonts-lyx (2.4.2.1-1) ... 106s Setting up libxcb-glx0:amd64 (1.17.0-2) ... 106s Setting up libdrm-intel1:amd64 (2.4.123-1) ... 106s Setting up libxcb-keysyms1:amd64 (0.4.0-1build4) ... 106s Setting up libxcb-shape0:amd64 (1.17.0-2) ... 106s Setting up x11-common (1:7.7+23ubuntu3) ... 106s Setting up libdeflate0:amd64 (1.22-1) ... 106s Setting up libqhull-r8.0:amd64 (2020.2-6build1) ... 106s Setting up libxcb-render-util0:amd64 (0.3.9-1build4) ... 106s Setting up python3-all (3.12.6-0ubuntu1) ... 106s Setting up libxcb-shm0:amd64 (1.17.0-2) ... 106s Setting up libxcb-icccm4:amd64 (0.4.2-1) ... 106s Setting up libgomp1:amd64 (14.2.0-8ubuntu1) ... 106s Setting up libjbig0:amd64 (2.1-6.1ubuntu2) ... 106s Setting up libpcre2-16-0:amd64 (10.42-4ubuntu3) ... 106s Setting up libaec0:amd64 (1.1.3-1) ... 106s Setting up python3-tz (2024.1-2) ... 106s Setting up libxcb-util1:amd64 (0.4.0-1build3) ... 106s Setting up libxxf86vm1:amd64 (1:1.1.4-1build4) ... 106s Setting up libxcb-xkb1:amd64 (1.17.0-2) ... 106s Setting up libxcb-image0:amd64 (0.4.0-2build1) ... 106s Setting up libxcb-present0:amd64 (1.17.0-2) ... 106s Setting up unicode-data (15.1.0-1) ... 106s Setting up python3-six (1.16.0-7) ... 106s Setting up libqt5core5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 106s Setting up python3-decorator (5.1.1-5) ... 106s Setting up libblas3:amd64 (3.12.0-3build2) ... 106s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 106s Setting up python3-packaging (24.1-1) ... 107s Setting up libxcb-xinerama0:amd64 (1.17.0-2) ... 107s Setting up libxfixes3:amd64 (1:6.0.0-2build1) ... 107s Setting up libxcb-sync1:amd64 (1.17.0-2) ... 107s Setting up python3-brotli (1.1.0-2build2) ... 107s Setting up libavahi-common-data:amd64 (0.8-13ubuntu6) ... 107s Setting up liblzf1:amd64 (3.6-4) ... 107s Setting up python3-cycler (0.12.1-1) ... 107s Setting up libimagequant0:amd64 (2.18.0-1build1) ... 107s Setting up libxkbcommon-x11-0:amd64 (1.6.0-1build1) ... 107s Setting up fonts-dejavu-mono (2.37-8) ... 107s Setting up python3-kiwisolver (1.4.7-2build1) ... 107s Setting up libtcl8.6:amd64 (8.6.15+dfsg-2) ... 107s Setting up fonts-dejavu-core (2.37-8) ... 107s Setting up libjpeg-turbo8:amd64 (2.1.5-2ubuntu2) ... 107s Setting up libglapi-mesa:amd64 (24.2.3-1ubuntu1) ... 107s Setting up libgfortran5:amd64 (14.2.0-8ubuntu1) ... 107s Setting up libvulkan1:amd64 (1.3.296.0-1) ... 107s Setting up libwebp7:amd64 (1.4.0-0.1) ... 107s Setting up libxcb-dri2-0:amd64 (1.17.0-2) ... 107s Setting up python3-pyqt5.sip (12.15.0-1build1) ... 107s Setting up libmtdev1t64:amd64 (1.1.6-1.2) ... 107s Setting up libxshmfence1:amd64 (1.3-1build5) ... 107s Setting up libxcb-randr0:amd64 (1.17.0-2) ... 107s Setting up libxslt1.1:amd64 (1.1.39-0exp1ubuntu1) ... 107s Setting up libqt5sql5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 107s Setting up libmd4c0:amd64 (0.5.2-2) ... 107s Setting up libopenjp2-7:amd64 (2.5.0-2ubuntu1) ... 107s Setting up libharfbuzz0b:amd64 (10.0.1-1) ... 107s Setting up python3-dateutil (2.9.0-2) ... 107s Setting up libxss1:amd64 (1:1.2.3-1build3) ... 107s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 107s Setting up python3-mpmath (1.3.0-1) ... 107s Setting up python-matplotlib-data (3.8.3-3) ... 107s Setting up libwebpmux3:amd64 (1.4.0-0.1) ... 107s Setting up python3-appdirs (1.4.4-4) ... 108s Setting up libsz2:amd64 (1.1.3-1) ... 108s Setting up libdrm-amdgpu1:amd64 (2.4.123-1) ... 108s Setting up libwacom-common (2.13.0-1) ... 108s Setting up libwayland-client0:amd64 (1.23.0-1) ... 108s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 108s Setting up python3-sympy (1.13.3-1) ... 113s Setting up libice6:amd64 (2:1.1.1-1) ... 113s Setting up mesa-libgallium:amd64 (24.2.3-1ubuntu1) ... 113s Setting up liblapack3:amd64 (3.12.0-3build2) ... 113s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 113s Setting up libqt5dbus5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 113s Setting up libgbm1:amd64 (24.2.3-1ubuntu1) ... 113s Setting up libwacom9:amd64 (2.13.0-1) ... 113s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 113s Setting up libwebpdemux2:amd64 (1.4.0-0.1) ... 113s Setting up libgl1-mesa-dri:amd64 (24.2.3-1ubuntu1) ... 113s Setting up libqt5network5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 113s Setting up libavahi-common3:amd64 (0.8-13ubuntu6) ... 113s Setting up libqt5xml5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 113s Setting up libqt5test5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 113s Setting up libinput-bin (1.26.2-1) ... 113s Setting up python3-fs (2.4.16-4) ... 113s Setting up libegl-mesa0:amd64 (24.2.3-1ubuntu1) ... 113s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 113s Setting up libraqm0:amd64 (0.10.1-1build1) ... 113s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 114s Setting up python3-lxml:amd64 (5.3.0-1build1) ... 114s Setting up libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 114s Setting up libegl1:amd64 (1.7.0-1build1) ... 114s Setting up python3-contourpy (1.3.0-2) ... 115s Setting up libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ... 115s Setting up libhdf5-103-1t64:amd64 (1.10.10+repack-4ubuntu3) ... 115s Setting up libsm6:amd64 (2:1.2.4-1) ... 115s Setting up libavahi-client3:amd64 (0.8-13ubuntu6) ... 115s Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1build1) ... 115s Setting up libinput10:amd64 (1.26.2-1) ... 115s Setting up libhdf5-hl-100t64:amd64 (1.10.10+repack-4ubuntu3) ... 115s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 117s Regenerating fonts cache... done. 117s Setting up libxft2:amd64 (2.3.6-1build1) ... 117s Setting up libglx-mesa0:amd64 (24.2.3-1ubuntu1) ... 117s Setting up python3-scipy (1.13.1-5) ... 119s Setting up libglx0:amd64 (1.7.0-1build1) ... 119s Setting up libtk8.6:amd64 (8.6.15-1) ... 119s Setting up python3.12-tk (3.12.7-3) ... 119s Setting up python3-h5py-serial (3.11.0-5ubuntu1) ... 120s Setting up python3-pil:amd64 (10.4.0-1ubuntu1) ... 120s Setting up libgl1:amd64 (1.7.0-1build1) ... 120s Setting up python3-h5py (3.11.0-5ubuntu1) ... 120s Setting up libcups2t64:amd64 (2.4.10-1ubuntu2) ... 120s Setting up tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 120s Setting up blt (2.5.3+dfsg-7build1) ... 120s Setting up python3-tk:amd64 (3.12.6-1ubuntu1) ... 120s Setting up libqt5gui5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 120s Setting up python3-pil.imagetk:amd64 (10.4.0-1ubuntu1) ... 120s Setting up libqt5widgets5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 120s Setting up libqt5help5:amd64 (5.15.15-2) ... 120s Setting up libqt5printsupport5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 120s Setting up libqt5designer5:amd64 (5.15.15-2) ... 120s Setting up python3-pyqt5 (5.15.11+dfsg-1build1) ... 120s Setting up python3-fonttools (4.46.0-1build2) ... 121s Setting up python3-ufolib2 (0.16.1+dfsg1-1) ... 121s Setting up python3-matplotlib (3.8.3-3) ... 122s Setting up python3-fabio (2024.4.0-2) ... 122s Setting up autopkgtest-satdep (0) ... 122s Processing triggers for libc-bin (2.40-1ubuntu3) ... 123s Processing triggers for man-db (2.13.0-1) ... 123s Processing triggers for udev (256.5-2ubuntu4) ... 129s (Reading database ... 84199 files and directories currently installed.) 129s Removing autopkgtest-satdep (0) ... 129s autopkgtest [09:37:45]: test command1: set -efu ; cp bootstrap.py pyproject.toml run_tests.py README.rst "$AUTOPKGTEST_TMP" ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py run_tests.py -v -m --installed ; done 129s autopkgtest [09:37:45]: test command1: [----------------------- 129s Testing with python3.12: 130s WARNING:run_tests:Test fabio 2024.4.0 from /usr/lib/python3/dist-packages/fabio 130s test_iter_abort_iteration (fabio.test.test_fabio_image.TestFabioImage.test_iter_abort_iteration) ... ok 130s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestFabioImage.test_iter_abort_iteration 130s testcopy (fabio.test.test_fabio_image.Test50000.testcopy) 130s test the copy statement ... ok 130s INFO:memProf:Time: 0.007s RAM: 6.144 Mb fabio.test.test_fabio_image.Test50000.testcopy 130s testgetmax (fabio.test.test_fabio_image.Test50000.testgetmax) 130s check max ... ok 130s INFO:memProf:Time: 0.003s RAM: 0.716 Mb fabio.test.test_fabio_image.Test50000.testgetmax 130s testgetmean (fabio.test.test_fabio_image.Test50000.testgetmean) 130s check mean ... ok 130s INFO:memProf:Time: 0.004s RAM: 0.124 Mb fabio.test.test_fabio_image.Test50000.testgetmean 130s testgetmin (fabio.test.test_fabio_image.Test50000.testgetmin) 130s check min ... ok 130s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_fabio_image.Test50000.testgetmin 130s testgetstddev (fabio.test.test_fabio_image.Test50000.testgetstddev) 130s check stddev ... ok 130s INFO:memProf:Time: 0.007s RAM: 8.196 Mb fabio.test.test_fabio_image.Test50000.testgetstddev 130s testRebin (fabio.test.test_fabio_image.TestSlices.testRebin) 130s Test the rebin method ... ok 130s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testRebin 130s testgetmax (fabio.test.test_fabio_image.TestSlices.testgetmax) 130s check max ... ok 130s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testgetmax 130s testgetmin (fabio.test.test_fabio_image.TestSlices.testgetmin) 130s check min ... ok 130s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testgetmin 130s testintegratearea (fabio.test.test_fabio_image.TestSlices.testintegratearea) 130s check integrations ... ok 130s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testintegratearea 130s testFlat (fabio.test.test_fabio_image.TestOpen.testFlat) 130s no compression ... ok 130s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.testFlat 130s test_badtype (fabio.test.test_fabio_image.TestOpen.test_badtype) ... ok 130s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.test_badtype 130s test_pathlib (fabio.test.test_fabio_image.TestOpen.test_pathlib) ... ok 130s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.test_pathlib 130s testbz2 (fabio.test.test_fabio_image.TestOpen.testbz2) 130s bzipped ... ok 130s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.testbz2 130s testgz (fabio.test.test_fabio_image.TestOpen.testgz) 130s gzipped ... ok 130s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.testgz 130s testpil (fabio.test.test_fabio_image.TestPilImage.testpil) ... WARNING:fabio.DEPRECATION:Function toPIL16 is deprecated since fabio version 0.9. Reason: Not maintained. Use 'fabio.utils.pilutils.create_pil_16' instead. 130s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 209, in testpil 130s pim = img.toPIL16() 130s ok 130s INFO:memProf:Time: 0.033s RAM: 0.000 Mb fabio.test.test_fabio_image.TestPilImage.testpil 130s testpil (fabio.test.test_fabio_image.TestPilImage2.testpil) ... WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py:232: RuntimeWarning: invalid value encountered in cast 130s return (numpy.random.random(shape) * sys.maxsize / 10).astype(typ) 130s 130s ok 130s INFO:memProf:Time: 0.036s RAM: 0.000 Mb fabio.test.test_fabio_image.TestPilImage2.testpil 130s testpil (fabio.test.test_fabio_image.TestPilImage3.testpil) ... WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py:240: RuntimeWarning: invalid value encountered in cast 130s return ((numpy.random.random(shape) - 0.5) * sys.maxsize / 10).astype(typ) 130s 130s ok 130s INFO:memProf:Time: 0.053s RAM: 0.000 Mb fabio.test.test_fabio_image.TestPilImage3.testpil 130s test_cleanup_pilimage_cache (fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_cleanup_pilimage_cache) ... WARNING:fabio.DEPRECATION:Function pilimage is deprecated. Reason: Setting pilimage not supported. This attrbute is not cached anymore. 130s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 257, in test_cleanup_pilimage_cache 130s image.pilimage = None 130s ok 130s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_cleanup_pilimage_cache 130s test_patch_dim (fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_patch_dim) ... WARNING:fabio.DEPRECATION:Function dim2 is deprecated. Reason: dim2 should not be updated. 130s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 249, in test_patch_dim 130s image.dim2, image.dim1 = data.shape 130s WARNING:fabio.DEPRECATION:Function dim1 is deprecated. Reason: dim1 should not be updated. 130s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 249, in test_patch_dim 130s image.dim2, image.dim1 = data.shape 130s ok 130s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_patch_dim 130s test_many_cases (fabio.test.test_filenames.TestFilenames.test_many_cases) 130s loop over CASES ... ok 130s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenames.test_many_cases 130s test_more_cases (fabio.test.test_filenames.TestFilenames.test_more_cases) ... ok 130s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenames.test_more_cases 130s test_more_cases_jump (fabio.test.test_filenames.TestFilenames.test_more_cases_jump) ... ok 130s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenames.test_more_cases_jump 130s test_FileNameObject_can_iterate (fabio.test.test_filenames.TestFilenameObjects.test_FileNameObject_can_iterate) 130s Regression test for Fable ... ok 130s INFO:memProf:Time: 0.010s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenameObjects.test_FileNameObject_can_iterate 130s test_files_are_being_opened (fabio.test.test_filenames.TestFilenameObjects.test_files_are_being_opened) 130s Regression test for Fable ... ok 130s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenameObjects.test_files_are_being_opened 130s testfirst (fabio.test.test_file_series.TestRandomSeries.testfirst) 130s check first ... ok 130s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestRandomSeries.testfirst 130s testjump (fabio.test.test_file_series.TestRandomSeries.testjump) 130s check jump ... ok 130s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestRandomSeries.testjump 130s testlast (fabio.test.test_file_series.TestRandomSeries.testlast) 130s check first ... ok 130s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestRandomSeries.testlast 130s testfirst (fabio.test.test_file_series.TestEdfNumbered.testfirst) 130s first in series ... ok 130s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testfirst 130s testlast (fabio.test.test_file_series.TestEdfNumbered.testlast) 130s last in series ... ok 130s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testlast 130s testlen (fabio.test.test_file_series.TestEdfNumbered.testlen) 130s check len ... ok 130s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testlen 130s testnext (fabio.test.test_file_series.TestEdfNumbered.testnext) 130s check all in order ... ok 130s INFO:memProf:Time: 0.011s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testnext 130s testnextjump (fabio.test.test_file_series.TestEdfNumbered.testnextjump) 130s check current ... ok 130s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testnextjump 130s testprevious (fabio.test.test_file_series.TestEdfNumbered.testprevious) 130s check all in order ... ok 130s INFO:memProf:Time: 0.010s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testprevious 130s testprevjump (fabio.test.test_file_series.TestEdfNumbered.testprevjump) 130s check current ... ok 130s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testprevjump 130s test_anyframe_frames (fabio.test.test_file_series.TestFileSeries.test_anyframe_frames) ... ok 130s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_frames 130s test_anyframe_getframe (fabio.test.test_file_series.TestFileSeries.test_anyframe_getframe) ... ok 130s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_getframe 130s test_anyframe_getframes (fabio.test.test_file_series.TestFileSeries.test_anyframe_getframes) ... ok 130s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_getframes 130s test_anyframe_nframes (fabio.test.test_file_series.TestFileSeries.test_anyframe_nframes) ... ok 130s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_nframes 130s test_anyframe_nofiles (fabio.test.test_file_series.TestFileSeries.test_anyframe_nofiles) ... ok 130s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_nofiles 130s test_filename_generator (fabio.test.test_file_series.TestFileSeries.test_filename_generator) ... ok 130s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_filename_generator 130s test_filename_iterator (fabio.test.test_file_series.TestFileSeries.test_filename_iterator) ... ok 130s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_filename_iterator 130s test_multiframe_frames (fabio.test.test_file_series.TestFileSeries.test_multiframe_frames) ... ok 130s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_frames 130s test_multiframe_getframe (fabio.test.test_file_series.TestFileSeries.test_multiframe_getframe) ... ok 130s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_getframe 130s test_multiframe_nframes (fabio.test.test_file_series.TestFileSeries.test_multiframe_nframes) ... ok 130s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_nframes 130s test_multiframe_nofiles (fabio.test.test_file_series.TestFileSeries.test_multiframe_nofiles) ... ok 130s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_nofiles 130s test_singleframe_frames (fabio.test.test_file_series.TestFileSeries.test_singleframe_frames) ... ok 130s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_frames 130s test_singleframe_getframe (fabio.test.test_file_series.TestFileSeries.test_singleframe_getframe) ... ok 130s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_getframe 130s test_singleframe_nframes (fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes) ... ok 130s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes 130s test_singleframe_nframes2 (fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes2) ... ok 130s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes2 130s test_singleframe_nframes3 (fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes3) ... ok 130s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes3 130s test_singleframe_nofiles (fabio.test.test_file_series.TestFileSeries.test_singleframe_nofiles) ... ok 130s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nofiles 130s test_with_filename_series (fabio.test.test_file_series.TestFileSeries.test_with_filename_series) ... ok 130s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_with_filename_series 130s test_with_numbered_file_series (fabio.test.test_file_series.TestFileSeries.test_with_numbered_file_series) ... ok 130s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_with_numbered_file_series 130s test_next1 (fabio.test.test_filename_steps.TestNext.test_next1) ... ok 130s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filename_steps.TestNext.test_next1 130s test_prev1 (fabio.test.test_filename_steps.TestPrev.test_prev1) ... ok 130s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filename_steps.TestPrev.test_prev1 130s test_jump1 (fabio.test.test_filename_steps.TestJump.test_jump1) ... ok 130s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filename_steps.TestJump.test_jump1 130s testheader (fabio.test.test_header_not_singleton.TestHeaderNotSingleton.testheader) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 131s INFO:fabio.utils.ExternalResources:Image mb_LP_1_001.img.bz2 successfully downloaded. 134s ok 134s INFO:memProf:Time: 4.311s RAM: 50.156 Mb fabio.test.test_header_not_singleton.TestHeaderNotSingleton.testheader 134s testcase (fabio.test.test_open_header.Test1.testcase) 134s check openheader can read edf headers ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675_header_only.edf.bz2') 134s INFO:fabio.utils.ExternalResources:Image F2K_Seb_Lyso0675_header_only.edf.bz2 successfully downloaded. 134s ok 134s INFO:memProf:Time: 0.146s RAM: 0.000 Mb fabio.test.test_open_header.Test1.testcase 134s testAdsc (fabio.test.test_open_image.TestOpenDtrek.testAdsc) 134s openimage opening adsc ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 134s ok 134s INFO:memProf:Time: 0.081s RAM: 147.492 Mb fabio.test.test_open_image.TestOpenDtrek.testAdsc 134s testAdscBz2 (fabio.test.test_open_image.TestOpenDtrek.testAdscBz2) 134s openimage opening adsc bzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 136s ok 136s INFO:memProf:Time: 1.267s RAM: 1.636 Mb fabio.test.test_open_image.TestOpenDtrek.testAdscBz2 136s testAdscGz (fabio.test.test_open_image.TestOpenDtrek.testAdscGz) 136s openimage opening adsc gzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.gz') 136s ok 136s INFO:memProf:Time: 0.250s RAM: 13.108 Mb fabio.test.test_open_image.TestOpenDtrek.testAdscGz 136s testBruker (fabio.test.test_open_image.TestOpenBruker.testBruker) 136s openimage opening bruker ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 136s INFO:fabio.utils.ExternalResources:Image Cr8F8140k103.0026.bz2 successfully downloaded. 136s ok 136s INFO:memProf:Time: 0.490s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenBruker.testBruker 136s testBrukerBz2 (fabio.test.test_open_image.TestOpenBruker.testBrukerBz2) 136s openimage opening bruker bzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 137s ok 137s INFO:memProf:Time: 0.040s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenBruker.testBrukerBz2 137s testBrukerGz (fabio.test.test_open_image.TestOpenBruker.testBrukerGz) 137s openimage opening bruker gzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.gz') 137s ok 137s INFO:memProf:Time: 0.008s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenBruker.testBrukerGz 137s testEdf (fabio.test.test_open_image.TestOpenEdf.testEdf) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 137s INFO:fabio.utils.ExternalResources:Image F2K_Seb_Lyso0675.edf.bz2 successfully downloaded. 138s ok 138s INFO:memProf:Time: 1.731s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenEdf.testEdf 138s testEdfBz2 (fabio.test.test_open_image.TestOpenEdf.testEdfBz2) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 140s ok 140s INFO:memProf:Time: 1.307s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenEdf.testEdfBz2 140s testEdfGz (fabio.test.test_open_image.TestOpenEdf.testEdfGz) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.gz') 140s ok 140s INFO:memProf:Time: 0.189s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenEdf.testEdfGz 140s testMask (fabio.test.test_open_image.TestOpenMask.testMask) 140s openimage opening fit2d msk ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 140s INFO:fabio.utils.ExternalResources:Image face.msk.bz2 successfully downloaded. 140s ok 140s INFO:memProf:Time: 0.142s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMask.testMask 140s testMaskBz2 (fabio.test.test_open_image.TestOpenMask.testMaskBz2) 140s openimage opening fit2d msk bzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 140s ok 140s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMask.testMaskBz2 140s testMaskGz (fabio.test.test_open_image.TestOpenMask.testMaskGz) 140s openimage opening fit2d msk gzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.gz') 140s ok 140s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMask.testMaskGz 140s testMccd (fabio.test.test_open_image.TestOpenMccd.testMccd) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.bz2') 141s INFO:fabio.utils.ExternalResources:Image somedata_0001.mccd.bz2 successfully downloaded. 141s ok 141s INFO:memProf:Time: 0.808s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMccd.testMccd 141s testMccdBz2 (fabio.test.test_open_image.TestOpenMccd.testMccdBz2) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.bz2') 141s ok 141s INFO:memProf:Time: 0.132s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMccd.testMccdBz2 141s testMccdGz (fabio.test.test_open_image.TestOpenMccd.testMccdGz) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.gz') 141s ok 141s INFO:memProf:Time: 0.019s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMccd.testMccdGz 141s testOxd (fabio.test.test_open_image.TestOpenOxd.testOxd) 141s openimage opening adsc ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 141s INFO:fabio.utils.ExternalResources:Image b191_1_9_1.img.bz2 successfully downloaded. 141s ok 141s INFO:memProf:Time: 0.449s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenOxd.testOxd 141s testOxdUnc (fabio.test.test_open_image.TestOpenOxd.testOxdUnc) 141s openimage opening adsc ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 142s INFO:fabio.utils.ExternalResources:Image b191_1_9_1_uncompressed.img.bz2 successfully downloaded. 143s ok 143s INFO:memProf:Time: 1.416s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenOxd.testOxdUnc 143s testComp (fabio.test.test_compression.TestByteOffset.testComp) ... ok 143s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_compression.TestByteOffset.testComp 143s testSC (fabio.test.test_compression.TestByteOffset.testSC) 143s test that datasets are unchanged after various compression/decompressions ... ok 143s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_compression.TestByteOffset.testSC 143s test_from_time (fabio.test.test_nexus.TestNexus.test_from_time) ... ok 143s INFO:memProf:Time: 0.010s RAM: 0.000 Mb fabio.test.test_nexus.TestNexus.test_from_time 143s test_nexus (fabio.test.test_nexus.TestNexus.test_nexus) 143s Test creation of Nexus files ... ok 143s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.test_nexus.TestNexus.test_nexus 143s testDefaultOption (fabio.test.test_fabio_convert.TestFabioConvert.testDefaultOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -F=msk -o=output 143s INFO:fabio.test.test_fabio_convert:Return code: 0 143s ok 143s INFO:memProf:Time: 0.186s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testDefaultOption 143s testForceOption (fabio.test.test_fabio_convert.TestFabioConvert.testForceOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -f -F=msk -o=output 143s INFO:fabio.test.test_fabio_convert:Return code: 0 143s ok 143s INFO:memProf:Time: 0.189s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testForceOption 143s testFullFormatName (fabio.test.test_fabio_convert.TestFabioConvert.testFullFormatName) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.* -F=numpyimage -o=output 143s INFO:fabio.test.test_fabio_convert:Return code: 0 143s ok 143s INFO:memProf:Time: 0.187s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testFullFormatName 143s testInteractiveOption (fabio.test.test_fabio_convert.TestFabioConvert.testInteractiveOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -n -i -F=msk -o=output 144s INFO:fabio.test.test_fabio_convert:Return code: 0 144s ok 144s INFO:memProf:Time: 0.188s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testInteractiveOption 144s testNoClobberOption (fabio.test.test_fabio_convert.TestFabioConvert.testNoClobberOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -n -F=msk -o=output 144s INFO:fabio.test.test_fabio_convert:Return code: 0 144s ok 144s INFO:memProf:Time: 0.190s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testNoClobberOption 144s testRemoveDestinationOption (fabio.test.test_fabio_convert.TestFabioConvert.testRemoveDestinationOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf --remove-destination -F=msk -o=output 144s INFO:fabio.test.test_fabio_convert:Return code: 0 144s ok 144s INFO:memProf:Time: 0.192s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testRemoveDestinationOption 144s testSingleFile (fabio.test.test_fabio_convert.TestFabioConvert.testSingleFile) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.edf -o=output/03.msk 144s INFO:fabio.test.test_fabio_convert:Return code: 0 144s ok 144s INFO:memProf:Time: 0.187s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testSingleFile 144s testSingleFileToDir (fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileToDir) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.edf -F=msk -o=output 144s INFO:fabio.test.test_fabio_convert:Return code: 0 144s ok 144s INFO:memProf:Time: 0.191s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileToDir 144s testSingleFileWithWildcardToDir (fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileWithWildcardToDir) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.* -F=msk -o=output 144s INFO:fabio.test.test_fabio_convert:Return code: 0 144s ok 144s INFO:memProf:Time: 0.184s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileWithWildcardToDir 144s testUpdateOption (fabio.test.test_fabio_convert.TestFabioConvert.testUpdateOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf --update -F=msk -o=output 145s INFO:fabio.test.test_fabio_convert:Return code: 0 145s ok 145s INFO:memProf:Time: 0.185s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testUpdateOption 145s test_missing_file (fabio.test.test_failing_files.TestFailingFiles.test_missing_file) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_missing_file 145s test_wrong_dm3 (fabio.test.test_failing_files.TestFailingFiles.test_wrong_dm3) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_dm3 145s test_wrong_edf (fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf 145s test_wrong_edf2 (fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf2) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf2 145s test_wrong_format (fabio.test.test_failing_files.TestFailingFiles.test_wrong_format) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_format 145s test_wrong_msk (fabio.test.test_failing_files.TestFailingFiles.test_wrong_msk) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_msk 145s test_wrong_numpy (fabio.test.test_failing_files.TestFailingFiles.test_wrong_numpy) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_numpy 145s test_annotation (fabio.test.test_formats.TestRegistration.test_annotation) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_annotation 145s test_deprecated_fabioimage_factory (fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory) 145s Check that it is still working ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory 145s test_deprecated_fabioimage_factory_missing_format (fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory_missing_format) 145s Check that it is still working ... ok 145s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory_missing_format 145s test_fabio_factory (fabio.test.test_formats.TestRegistration.test_fabio_factory) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabio_factory 145s test_fabio_factory_missing_format (fabio.test.test_formats.TestRegistration.test_fabio_factory_missing_format) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabio_factory_missing_format 145s test_fabioformats_factory (fabio.test.test_formats.TestRegistration.test_fabioformats_factory) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabioformats_factory 145s test_fabioformats_factory_missing_format (fabio.test.test_formats.TestRegistration.test_fabioformats_factory_missing_format) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabioformats_factory_missing_format 145s test_function (fabio.test.test_formats.TestRegistration.test_function) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_function 145s test_not_existing (fabio.test.test_formats.TestRegistration.test_not_existing) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_not_existing 145s test_edf_to_tiff (fabio.test.test_image_convert.TestImageConvert.test_edf_to_tiff) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.edf') 145s INFO:fabio.utils.ExternalResources:Image face.edf.bz2 successfully downloaded. 145s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/face.edf (frame 0) misses mandatory keys: SIZE 145s ok 145s INFO:memProf:Time: 0.155s RAM: 0.000 Mb fabio.test.test_image_convert.TestImageConvert.test_edf_to_tiff 145s test_append (fabio.test.test_tiffio.TestTiffIO.test_append) ... ok 145s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_tiffio.TestTiffIO.test_append 145s test_read (fabio.test.test_tiffio.TestTiffIO.test_read) ... INFO:fabio.test.test_tiffio:nRows = 100 145s INFO:fabio.test.test_tiffio:nColumns = 100 145s INFO:fabio.test.test_tiffio:nBits = 16 145s INFO:fabio.test.test_tiffio:compression = False 145s INFO:fabio.test.test_tiffio:compression_type = 1 145s INFO:fabio.test.test_tiffio:imageDescription = Title=1st 145s 145s INFO:fabio.test.test_tiffio:stripOffsets = [168] 145s INFO:fabio.test.test_tiffio:rowsPerStrip = 100 145s INFO:fabio.test.test_tiffio:stripByteCounts = [20000] 145s INFO:fabio.test.test_tiffio:software = PyMca.TiffIO 145s INFO:fabio.test.test_tiffio:date = Unknown Date 145s INFO:fabio.test.test_tiffio:sampleFormat = 1 145s INFO:fabio.test.test_tiffio:photometricInterpretation = 1 145s INFO:fabio.test.test_tiffio:info = {'Title': '1st'} 145s INFO:fabio.test.test_tiffio:data [0, 0:10] = [0 1 2 3 4 5 6 7 8 9] 145s ok 145s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_tiffio.TestTiffIO.test_read 145s test_write (fabio.test.test_tiffio.TestTiffIO.test_write) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_tiffio.TestTiffIO.test_write 145s test_single_frame_iterator (fabio.test.test_frames.TestFabioImage.test_single_frame_iterator) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestFabioImage.test_single_frame_iterator 145s test_content (fabio.test.test_frames.TestVirtualEdf.test_content) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_content 145s test_frames_abort_iteration (fabio.test.test_frames.TestVirtualEdf.test_frames_abort_iteration) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_frames_abort_iteration 145s test_frames_full_iteration (fabio.test.test_frames.TestVirtualEdf.test_frames_full_iteration) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_frames_full_iteration 145s test_frames_random_access (fabio.test.test_frames.TestVirtualEdf.test_frames_random_access) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_frames_random_access 145s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 145s INFO:fabio.utils.ExternalResources:Image multiframes.edf.bz2 successfully downloaded. 145s test_content (fabio.test.test_frames.TestEdf.test_content) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_content 145s test_frames_abort_iteration (fabio.test.test_frames.TestEdf.test_frames_abort_iteration) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_frames_abort_iteration 145s test_frames_full_iteration (fabio.test.test_frames.TestEdf.test_frames_full_iteration) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_frames_full_iteration 145s test_frames_random_access (fabio.test.test_frames.TestEdf.test_frames_random_access) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_frames_random_access 145s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.tif.bz2') 145s INFO:fabio.utils.ExternalResources:Image multiframes.tif.bz2 successfully downloaded. 145s test_content (fabio.test.test_frames.TestTiff.test_content) ... ok 145s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_content 145s test_frames_abort_iteration (fabio.test.test_frames.TestTiff.test_frames_abort_iteration) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_frames_abort_iteration 145s test_frames_full_iteration (fabio.test.test_frames.TestTiff.test_frames_full_iteration) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_frames_full_iteration 145s test_frames_random_access (fabio.test.test_frames.TestTiff.test_frames_random_access) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_frames_random_access 145s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.tif.bz2') 145s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 145s test_frames_abort_iteration (fabio.test.test_frames.TestFileSeries.test_frames_abort_iteration) ... ok 145s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_frames.TestFileSeries.test_frames_abort_iteration 145s test_frames_full_iteration (fabio.test.test_frames.TestFileSeries.test_frames_full_iteration) ... ok 145s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_frames.TestFileSeries.test_frames_full_iteration 145s test_frames_random_access (fabio.test.test_frames.TestFileSeries.test_frames_random_access) ... ok 145s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_frames.TestFileSeries.test_frames_random_access 145s test_open (fabio.test.test_fabio.TestFabio.test_open) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 145s ok 145s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open 145s test_open_bytesio (fabio.test.test_fabio.TestFabio.test_open_bytesio) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 145s ok 145s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_bytesio 145s test_open_fabio_bytesio (fabio.test.test_fabio.TestFabio.test_open_fabio_bytesio) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 145s ok 145s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_fabio_bytesio 145s test_open_series (fabio.test.test_fabio.TestFabio.test_open_series) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 145s ok 145s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_series 145s test_open_series_first_filename (fabio.test.test_fabio.TestFabio.test_open_series_first_filename) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 145s ok 145s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_series_first_filename 145s test_open_series_with (fabio.test.test_fabio.TestFabio.test_open_series_with) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 145s ok 145s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_series_with 145s test_open_with (fabio.test.test_fabio.TestFabio.test_open_with) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 145s ok 145s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_with 145s test_getstats (fabio.test.codecs.test_edfimage.TestFlatEdfs.test_getstats) 145s test statistics ... INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 145s ok 145s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestFlatEdfs.test_getstats 145s test_headers (fabio.test.codecs.test_edfimage.TestFlatEdfs.test_headers) ... INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 145s ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestFlatEdfs.test_headers 145s test_read (fabio.test.codecs.test_edfimage.TestFlatEdfs.test_read) 145s check readable ... INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 145s ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestFlatEdfs.test_read 145s test_getstats (fabio.test.codecs.test_edfimage.TestBzipEdf.test_getstats) 145s test statistics ... INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 145s ok 145s INFO:memProf:Time: 0.037s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBzipEdf.test_getstats 145s test_headers (fabio.test.codecs.test_edfimage.TestBzipEdf.test_headers) ... INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 145s ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBzipEdf.test_headers 145s test_read (fabio.test.codecs.test_edfimage.TestBzipEdf.test_read) 145s check readable ... INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 145s ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBzipEdf.test_read 145s test_getstats (fabio.test.codecs.test_edfimage.TestGzipEdf.test_getstats) 145s test statistics ... INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 145s ok 145s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestGzipEdf.test_getstats 145s test_headers (fabio.test.codecs.test_edfimage.TestGzipEdf.test_headers) ... INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 145s ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestGzipEdf.test_headers 145s test_read (fabio.test.codecs.test_edfimage.TestGzipEdf.test_read) 145s check readable ... INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 145s ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestGzipEdf.test_read 145s test_read (fabio.test.codecs.test_edfimage.TestEdfs.test_read) 145s check we can read these images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 145s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('id13_badPadding.edf.bz2') 146s INFO:fabio.utils.ExternalResources:Image id13_badPadding.edf.bz2 successfully downloaded. 146s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf Mean: exp=1504.29, obt=1504.291387796402 146s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf StdDev: exp=217.61, obt=217.60628547694915 147s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.bz2 Mean: exp=1504.29, obt=1504.291387796402 147s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.bz2 StdDev: exp=217.61, obt=217.60628547694915 147s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.gz Mean: exp=1504.29, obt=1504.291387796402 147s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.gz StdDev: exp=217.61, obt=217.60628547694915 147s INFO:fabio.test.codecs.test_edfimage:id13_badPadding.edf Mean: exp=275.62, obt=275.6165885925293 147s INFO:fabio.test.codecs.test_edfimage:id13_badPadding.edf StdDev: exp=583.44, obt=583.4356660155632 147s ok 147s INFO:memProf:Time: 2.073s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfs.test_read 147s test_rebin (fabio.test.codecs.test_edfimage.TestEdfs.test_rebin) 147s test the rebin of edfdata ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 147s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('id13_badPadding.edf.bz2') 147s ok 147s INFO:memProf:Time: 0.015s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfs.test_rebin 147s test_read (fabio.test.codecs.test_edfimage.TestEdfCompressedData.test_read) 147s check we can read these images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfGzip_U16.edf.bz2') 148s INFO:fabio.utils.ExternalResources:Image edfGzip_U16.edf.bz2 successfully downloaded. 149s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfCompressed_U16.edf.bz2') 150s INFO:fabio.utils.ExternalResources:Image edfCompressed_U16.edf.bz2 successfully downloaded. 150s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfUncompressed_U16.edf.bz2') 151s INFO:fabio.utils.ExternalResources:Image edfUncompressed_U16.edf.bz2 successfully downloaded. 153s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 153s INFO:fabio.edfimage:Data stream is padded : 8389062 > required 8388608 bytes 153s ok 153s INFO:memProf:Time: 5.826s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfCompressedData.test_read 153s test_getFrame_mono (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_mono) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 154s INFO:fabio.utils.ExternalResources:Image MultiFrame.edf.bz2 successfully downloaded. 156s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 156s INFO:fabio.utils.ExternalResources:Image MultiFrame-Frame0.edf.bz2 successfully downloaded. 158s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 158s INFO:fabio.utils.ExternalResources:Image MultiFrame-Frame1.edf.bz2 successfully downloaded. 159s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 159s ok 159s INFO:memProf:Time: 6.203s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_mono 159s test_getFrame_multi (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_multi) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 159s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 159s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 159s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 159s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 159s ok 159s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_multi 159s test_next_multi (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_next_multi) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 159s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 159s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 159s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 159s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 159s ok 159s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_next_multi 159s test_openimage_multiframes (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_openimage_multiframes) 159s test if openimage can directly read first or second frame of a multi-frame ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 159s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 159s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 159s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 159s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 159s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 159s ok 159s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_openimage_multiframes 159s test_previous_mono (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_mono) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 159s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 159s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 159s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 159s ok 159s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_mono 159s test_previous_multi (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_multi) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 159s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 159s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 159s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 159s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 159s ok 159s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_multi 159s test_fastread (fabio.test.codecs.test_edfimage.TestEdfFastRead.test_fastread) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 159s ok 159s INFO:memProf:Time: 0.210s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfFastRead.test_fastread 159s testBzip2 (fabio.test.codecs.test_edfimage.TestEdfWrite.testBzip2) ... ok 159s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfWrite.testBzip2 159s testFlat (fabio.test.codecs.test_edfimage.TestEdfWrite.testFlat) ... ok 159s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfWrite.testFlat 159s testGzip (fabio.test.codecs.test_edfimage.TestEdfWrite.testGzip) ... ok 159s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfWrite.testGzip 159s test_bug_27 (fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_27) 159s import fabio ... ok 159s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_27 160s test_bug_459 (fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_459) ... ok 160s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_459 160s test_remove_metadata_header (fabio.test.codecs.test_edfimage.TestEdfRegression.test_remove_metadata_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.edf.bz2') 160s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/face.edf (frame 0) misses mandatory keys: SIZE 160s ok 160s INFO:memProf:Time: 0.010s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfRegression.test_remove_metadata_header 160s test_base (fabio.test.codecs.test_edfimage.TestBadFiles.test_base) ... INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_base.edf (frame 0) misses mandatory keys: HEADERID SIZE 160s INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_base.edf (frame 1) misses mandatory keys: HEADERID SIZE 160s ok 160s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_base 160s test_empty (fabio.test.codecs.test_edfimage.TestBadFiles.test_empty) ... ok 160s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_empty 160s test_full_frame_plus_half_header (fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_half_header) ... INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_half_header.edf (frame 0) misses mandatory keys: HEADERID SIZE 160s ok 160s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_half_header 160s test_full_frame_plus_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data.edf (frame 0) misses mandatory keys: HEADERID SIZE 160s INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data.edf (frame 1) misses mandatory keys: HEADERID SIZE 160s ERROR:fabio.edfimage:Data stream is incomplete: 131072 < expected 262144 bytes 160s ok 160s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data 160s test_full_frame_plus_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data.edf (frame 0) misses mandatory keys: HEADERID SIZE 160s INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data.edf (frame 1) misses mandatory keys: HEADERID SIZE 160s ok 160s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data 160s test_half_header (fabio.test.codecs.test_edfimage.TestBadFiles.test_half_header) ... ok 160s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_half_header 160s test_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_half_data.edf (frame 0) misses mandatory keys: HEADERID SIZE 160s ERROR:fabio.edfimage:Data stream is incomplete: 131072 < expected 262144 bytes 160s ok 160s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_half_data 160s test_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_no_data.edf (frame 0) misses mandatory keys: HEADERID SIZE 160s ok 160s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_no_data 160s test_wrong_magic (fabio.test.codecs.test_edfimage.TestBadFiles.test_wrong_magic) ... ok 160s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_wrong_magic 160s test_base (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base) ... INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 160s INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base.edf.gz (frame 1) misses mandatory keys: HEADERID SIZE 160s ok 160s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base 160s test_empty (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_empty) ... ok 160s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_empty 160s test_full_frame_plus_half_header (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_half_header) ... INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_half_header.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 160s ok 160s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_half_header 160s test_full_frame_plus_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 160s INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data.edf.gz (frame 1) misses mandatory keys: HEADERID SIZE 160s ok 160s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data 160s test_full_frame_plus_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 160s INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data.edf.gz (frame 1) misses mandatory keys: HEADERID SIZE 160s ok 160s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data 160s test_half_header (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_half_header) ... ok 160s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_half_header 160s test_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_half_data.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 160s ok 160s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_half_data 160s test_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_uzn5qa1x_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_no_data.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 160s ok 160s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_no_data 160s test_wrong_magic (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_wrong_magic) ... ok 160s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_wrong_magic 160s test_multi_frame (fabio.test.codecs.test_edfimage.TestEdfIterator.test_multi_frame) 160s Test iterator on a multi-frame EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 160s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 160s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 160s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 160s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 160s ok 160s INFO:memProf:Time: 0.594s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfIterator.test_multi_frame 160s test_single_frame (fabio.test.codecs.test_edfimage.TestEdfIterator.test_single_frame) 160s Test iterator on a single frame EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfCompressed_U16.edf') 160s ok 160s INFO:memProf:Time: 0.311s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfIterator.test_single_frame 161s test_all_images (fabio.test.codecs.test_edfimage.TestSphere2SaxsSamples.test_all_images) ... INFO:fabio.utils.ExternalResources:Image sphere2saxs_output.tar.bz2 successfully downloaded. 161s WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/utils/ExternalResources.py:214: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 161s fd.extractall(output) 161s 161s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 161s INFO:fabio.edfimage:Data stream is padded : 80484 > required 80000 bytes 161s INFO:fabio.edfimage:Data stream is padded : 80384 > required 80000 bytes 161s INFO:fabio.edfimage:Data stream is padded : 80384 > required 80000 bytes 161s INFO:fabio.edfimage:Data stream is padded : 80384 > required 80000 bytes 161s ok 161s INFO:memProf:Time: 0.511s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestSphere2SaxsSamples.test_all_images 161s testNonAsciiHeader (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testNonAsciiHeader) 161s Non-ascii characters are skipped. ... WARNING:fabio.edfimage:Non ASCII in key-value: Drop b'mykey' = b'\xc3\xa9yvalue' 161s ok 161s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testNonAsciiHeader 161s testReadBadPadding (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadBadPadding) 161s Some old data were found with headers padded with 0xcd (issue #373) ... ok 161s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadBadPadding 161s testReadGoodPadding (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadGoodPadding) ... ok 161s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadGoodPadding 161s testReadZeroPadding (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadZeroPadding) ... ok 161s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadZeroPadding 161s test_edf6_single_raw_bf_gblk_gz (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edf6_single_raw_bf_gblk_gz) 162s Test reading gzipped data files linking to an external binary data file. ... INFO:fabio.utils.ExternalResources:Image ehf_images2.tar.bz2 successfully downloaded. 162s WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/utils/ExternalResources.py:214: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 162s fd.extractall(output) 162s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 162s ok 162s INFO:memProf:Time: 0.700s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edf6_single_raw_bf_gblk_gz 162s test_edfblocktypes (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfblocktypes) 162s Test reading (gzipped) extended edf multi frame data files with and without a general block ... INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 162s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 162s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 162s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 162s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 162s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 162s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 162s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 162s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 162s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 162s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 162s INFO:fabio.edfimage:Data stream is padded : 2875 > required 2400 bytes 162s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 162s INFO:fabio.edfimage:Data stream is padded : 2874 > required 2400 bytes 162s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 162s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 162s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 162s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 162s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 162s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 162s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 162s INFO:fabio.edfimage:Data stream is padded : 2875 > required 2400 bytes 162s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 162s INFO:fabio.edfimage:Data stream is padded : 2874 > required 2400 bytes 162s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 162s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 162s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 162s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 162s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 162s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 162s ok 162s INFO:memProf:Time: 0.124s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfblocktypes 162s test_edfmulti_raw_bf_gblk (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk) 162s Reading an uncompressed edf-multi-frame-file with references to data ... WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/utils/ExternalResources.py:214: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 162s fd.extractall(output) 162s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 162s ok 162s INFO:memProf:Time: 0.185s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk 162s test_edfmulti_raw_bf_gblk_gz (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk_gz) 162s Test reading the files of the test test_edfmulti_raw_bf_gblk after ... WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 162s ok 162s INFO:memProf:Time: 0.244s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk_gz 162s test_edfmulti_raw_dark_raw_bf_gblk (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_dark_raw_bf_gblk) 162s Linking data of several frames to different parts of a single external ... INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 162s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 162s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 162s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 162s ok 162s INFO:memProf:Time: 0.111s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_dark_raw_bf_gblk 162s test_edfsingle_raw_bf_gblk (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk) 162s Reading an uncompressed edf-single-frame-file with references to data ... WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 162s ok 162s INFO:memProf:Time: 0.092s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk 162s test_edfsingle_raw_bf_gblk_gz (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk_gz) 162s Test reading gzipped data files linking to an external binary data file. ... WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 162s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 163s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 163s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 163s ok 163s INFO:memProf:Time: 0.094s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk_gz 163s test_pitfalls (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_pitfalls) 163s multi5+headerblob_edf1.edf.gz ... INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 163s ok 163s INFO:memProf:Time: 0.134s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_pitfalls 163s test_special (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_special) 163s 09_special/face_ok.edf.gz ... INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_ok.edf.gz (frame 0) misses mandatory keys: SIZE 163s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_ok.edf.gz (frame 0) misses mandatory keys: SIZE 163s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary1.edf.gz (frame 0) misses mandatory keys: SIZE 163s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary1.edf.gz (frame 0) misses mandatory keys: SIZE 163s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary2.edf.gz (frame 0) misses mandatory keys: SIZE 163s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary2.edf.gz (frame 0) misses mandatory keys: SIZE 163s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary3.edf.gz (frame 0) misses mandatory keys: SIZE 163s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary3.edf.gz (frame 0) misses mandatory keys: SIZE 163s ok 163s INFO:memProf:Time: 0.108s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_special 163s test_bug_388 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_388) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 164s INFO:fabio.utils.ExternalResources:Image run2_1_00148.edf.bz2 successfully downloaded. 184s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 185s INFO:fabio.utils.ExternalResources:Image run2_1_00148.cbf.bz2 successfully downloaded. 185s ok 185s INFO:memProf:Time: 22.644s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_388 185s test_bug_408 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_408) 185s Bug when reading files generated by XDS ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 185s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 185s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XDS.cbf.bz2') 186s INFO:fabio.utils.ExternalResources:Image XDS.cbf.bz2 successfully downloaded. 186s ok 186s INFO:memProf:Time: 1.045s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_408 186s test_bug_528 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_528) 186s Bug when writing/reading small files ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 186s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 186s ok 186s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_528 186s test_bug_535 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_535) 186s Bug when reading files with long path in header ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 186s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 186s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('ref-test_5_0001.cbf') 187s INFO:fabio.utils.ExternalResources:Image ref-test_5_0001.cbf.bz2 successfully downloaded. 189s ok 189s INFO:memProf:Time: 2.871s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_535 189s test_byte_offset (fabio.test.codecs.test_cbfimage.TestCbfReader.test_byte_offset) 189s check byte offset algorithm ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 189s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 189s INFO:fabio.test.codecs.test_cbfimage:Timing for Numpy method : 0.090s 189s INFO:fabio.test.codecs.test_cbfimage:Timing for Cython method : 0.010s, max delta= 0 189s ok 189s INFO:memProf:Time: 0.137s RAM: 4.744 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_byte_offset 189s test_cif (fabio.test.codecs.test_cbfimage.TestCbfReader.test_cif) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 189s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 189s ok 189s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_cif 189s test_consitency_convert (fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_convert) 189s Test if an image can be read and saved and the results are "similar" ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 189s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 190s ok 190s INFO:memProf:Time: 0.087s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_convert 190s test_consitency_manual (fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_manual) 190s Test if an image can be read and saved and the results are "similar" ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 190s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 190s ok 190s INFO:memProf:Time: 0.089s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_manual 190s test_read (fabio.test.codecs.test_cbfimage.TestCbfReader.test_read) 190s check whole reader ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 190s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 190s INFO:fabio.test.codecs.test_cbfimage:Reading CBF took 0.022s whereas the same EDF took 0.000s 190s ok 190s INFO:memProf:Time: 0.053s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_read 190s test_unicode (fabio.test.codecs.test_cbfimage.TestCbfReader.test_unicode) 190s Test if an image can be read and saved to an unicode named ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 190s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 190s ok 190s INFO:memProf:Time: 0.090s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_unicode 190s test_write (fabio.test.codecs.test_cbfimage.TestCbfReader.test_write) 190s Rest writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 190s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 190s ok 190s INFO:memProf:Time: 0.089s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_write 190s testsame (fabio.test.codecs.test_dtrekimage.TestMatch.testsame) 190s test ADSC image match to EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 190s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.edf.bz2') 191s INFO:fabio.utils.ExternalResources:Image mb_LP_1_001.edf.bz2 successfully downloaded. 218s ok 218s INFO:memProf:Time: 28.493s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestMatch.testsame 218s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 218s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('HSA_1_5mg_C1_0004.img.bz2') 219s INFO:fabio.utils.ExternalResources:Image HSA_1_5mg_C1_0004.img.bz2 successfully downloaded. 220s test_read (fabio.test.codecs.test_dtrekimage.TestRealSamples.test_read) 221s check we can read flat ADSC images ... ok 221s INFO:memProf:Time: 0.756s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestRealSamples.test_read 221s test_write_and_read (fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read) ... WARNING:fabio.dtrekimage:Data type uint64 unsupported. Store it as uint32. 221s WARNING:fabio.dtrekimage:Data type int64 unsupported. Store it as int32. 221s WARNING:fabio.dtrekimage:Data type float16 unsupported. Store it as float32. 221s ok 221s INFO:memProf:Time: 0.018s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read 221s test_write_and_read_cube (fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_cube) ... ok 221s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_cube 221s test_write_and_read_empty (fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_empty) ... ok 221s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_empty 221s test_getmatch (fabio.test.codecs.test_fit2dmaskimage.TestFaceMask.test_getmatch) 221s test edf and msk are the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 221s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.edf.bz2') 221s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/face.edf (frame 0) misses mandatory keys: SIZE 221s ok 221s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestFaceMask.test_getmatch 221s test_getmatch (fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_getmatch) 221s test edf and msk are the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.msk.bz2') 221s INFO:fabio.utils.ExternalResources:Image fit2d_click.msk.bz2 successfully downloaded. 221s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.edf.bz2') 221s INFO:fabio.utils.ExternalResources:Image fit2d_click.edf.bz2 successfully downloaded. 221s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/fit2d_click.edf (frame 0) misses mandatory keys: SIZE 221s ok 221s INFO:memProf:Time: 0.334s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_getmatch 221s test_read (fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_read) 221s Check it reads a mask OK ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.msk.bz2') 221s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.edf.bz2') 221s ok 221s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_read 221s testBzip2 (fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testBzip2) ... ok 221s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testBzip2 221s testFlat (fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testFlat) ... ok 221s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testFlat 221s testGzip (fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testGzip) ... ok 221s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testGzip 221s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.spr.bz2') 221s INFO:fabio.utils.ExternalResources:Image example.spr.bz2 successfully downloaded. 223s test_read (fabio.test.codecs.test_fit2dspreadsheetimage.TestRealSamples.test_read) 227s check we can read flat ADSC images ... ok 227s INFO:memProf:Time: 3.833s RAM: 0.000 Mb fabio.test.codecs.test_fit2dspreadsheetimage.TestRealSamples.test_read 227s test_read (fabio.test.codecs.test_geimage.TestGE.test_read) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_aSI_detector_image_1529.bz2') 227s INFO:fabio.utils.ExternalResources:Image GE_aSI_detector_image_1529.bz2 successfully downloaded. 229s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_aSI_detector_image_1529.gz') 229s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_aSI_detector_image_1529') 232s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_image_1frame_intact_header.ge') 232s INFO:fabio.utils.ExternalResources:Image GE_image_1frame_intact_header.ge.bz2 successfully downloaded. 234s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_image_1frame_blanked_header.ge') 235s INFO:fabio.utils.ExternalResources:Image GE_image_1frame_blanked_header.ge.bz2 successfully downloaded. 236s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('dark_before_000428.edf.ge5') 237s INFO:fabio.utils.ExternalResources:Image dark_before_000428.edf.ge5.bz2 successfully downloaded. 250s ok 250s INFO:memProf:Time: 23.822s RAM: 0.000 Mb fabio.test.codecs.test_geimage.TestGE.test_read 250s test_aux (fabio.test.codecs.test_mar345image.TestMar345.test_aux) 250s test auxillary functions ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 251s INFO:fabio.utils.ExternalResources:Image example.mar2300.bz2 successfully downloaded. 251s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 252s INFO:fabio.utils.ExternalResources:Image Fe3O4_023_101.mar2560.bz2 successfully downloaded. 252s ok 252s INFO:memProf:Time: 2.073s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_aux 252s test_byteswap_write (fabio.test.codecs.test_mar345image.TestMar345.test_byteswap_write) 252s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 252s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 255s ok 255s INFO:memProf:Time: 2.957s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_byteswap_write 255s test_memoryleak (fabio.test.codecs.test_mar345image.TestMar345.test_memoryleak) 255s This test takes a lot of time, so only in debug mode. ... skipped 'very slow test' 255s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_memoryleak 255s test_read (fabio.test.codecs.test_mar345image.TestMar345.test_read) 255s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 255s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 255s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300') 256s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 256s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.gz') 256s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560') 257s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 257s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.gz') 257s ok 257s INFO:memProf:Time: 1.522s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_read 257s test_write (fabio.test.codecs.test_mar345image.TestMar345.test_write) 257s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 257s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 260s ok 260s INFO:memProf:Time: 3.088s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_write 260s test_read (fabio.test.codecs.test_brukerimage.TestBruker.test_read) 260s see if we can read the test image ... ok 260s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestBruker.test_read 260s test_read (fabio.test.codecs.test_brukerimage.TestBzipBruker.test_read) 260s see if we can read the test image ... ok 260s INFO:memProf:Time: 0.021s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestBzipBruker.test_read 260s test_read (fabio.test.codecs.test_brukerimage.TestGzipBruker.test_read) 260s see if we can read the test image ... ok 260s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestGzipBruker.test_read 260s test_read (fabio.test.codecs.test_brukerimage.TestRealImg.test_read) 260s check we can read bruker images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 260s ok 260s INFO:memProf:Time: 0.020s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestRealImg.test_read 260s test_write (fabio.test.codecs.test_brukerimage.TestRealImg.test_write) 260s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 260s ok 260s INFO:memProf:Time: 0.118s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestRealImg.test_write 260s test_linear (fabio.test.codecs.test_brukerimage.TestBrukerLinear.test_linear) 260s test for self consistency of random data read/write ... WARNING:fabio.brukerimage:performing correction with slope=5.960417226444318e-08, offset=7.985435e-06 (LINEAR=5.960417226444318e-08 7.985435e-06) 260s ok 260s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestBrukerLinear.test_linear 260s test_conversion (fabio.test.codecs.test_bruker100image.TestBruker100.test_conversion) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 261s INFO:fabio.utils.ExternalResources:Image NaCl_10_01_0009.npy.bz2 successfully downloaded. 262s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 262s INFO:fabio.utils.ExternalResources:Image NaCl_10_01_0009.sfrm.bz2 successfully downloaded. 262s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('testcbf.cbf.bz2') 262s INFO:fabio.utils.ExternalResources:Image testcbf.cbf.bz2 successfully downloaded. 262s ok 262s INFO:memProf:Time: 2.241s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_conversion 262s test_read (fabio.test.codecs.test_bruker100image.TestBruker100.test_read) 262s check we can read bruker100 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 262s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 262s ok 262s INFO:memProf:Time: 0.020s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_read 262s test_same (fabio.test.codecs.test_bruker100image.TestBruker100.test_same) 262s check we can read bruker100 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 262s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 263s ok 263s INFO:memProf:Time: 0.057s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_same 263s test_split_merge (fabio.test.codecs.test_bruker100image.TestBruker100.test_split_merge) 263s Pretty challanging random example ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 263s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 263s INFO:fabio.test.codecs.test_bruker100image:size of underflow: (65158,) overflow1 (100,) overflow2: (95,) 263s INFO:fabio.test.codecs.test_bruker100image:size of underflow: (1547,) overflow1 (175,) overflow2: (95,) 263s INFO:fabio.test.codecs.test_bruker100image:size of underflow: (0,) overflow1 (1594,) overflow2: (1514,) 263s ok 263s INFO:memProf:Time: 0.007s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_split_merge 263s test_write (fabio.test.codecs.test_bruker100image.TestBruker100.test_write) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 263s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 263s ok 263s INFO:memProf:Time: 0.005s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_write 263s test_read (fabio.test.codecs.test_mccdimage.TestFlatMccds.test_read) 263s check we can read MarCCD images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('corkcont2_H_0089.mccd.bz2') 263s INFO:fabio.utils.ExternalResources:Image corkcont2_H_0089.mccd.bz2 successfully downloaded. 265s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.bz2') 265s ok 265s INFO:memProf:Time: 2.618s RAM: 0.000 Mb fabio.test.codecs.test_mccdimage.TestFlatMccds.test_read 265s test_read_openimage (fabio.test.codecs.test_mccdimage.TestNormalTiffOK.test_read_openimage) ... ok 265s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_mccdimage.TestNormalTiffOK.test_read_openimage 265s test_read (fabio.test.codecs.test_oxdimage.TestOxd.test_read) 265s Test reading of compressed OXD images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 265s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 265s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('100nmfilmonglass_1_1.img.bz2') 266s INFO:fabio.utils.ExternalResources:Image 100nmfilmonglass_1_1.img.bz2 successfully downloaded. 266s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus300k.rod_img.bz2') 266s INFO:fabio.utils.ExternalResources:Image pilatus300k.rod_img.bz2 successfully downloaded. 267s INFO:fabio.OXDimage:Compressed with the TY5 compression 267s INFO:fabio.OXDimage:TY5 decompression is slow for now 269s INFO:fabio.OXDimage:TY5: Exception: 16bits: 2844, 32bits: 0 269s ok 269s INFO:memProf:Time: 4.010s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxd.test_read 269s test_write (fabio.test.codecs.test_oxdimage.TestOxd.test_write) 269s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 269s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 269s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('100nmfilmonglass_1_1.img.bz2') 269s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus300k.rod_img.bz2') 269s INFO:fabio.test.codecs.test_oxdimage:Skip write test for now 269s INFO:fabio.OXDimage:Compressed with the TY5 compression 269s INFO:fabio.OXDimage:TY5 decompression is slow for now 271s INFO:fabio.OXDimage:TY5: Exception: 16bits: 2844, 32bits: 0 271s INFO:fabio.test.codecs.test_oxdimage:Skip write test for now 271s INFO:fabio.test.codecs.test_oxdimage:Skip write test for now 271s ok 271s INFO:memProf:Time: 1.779s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxd.test_write 271s test_same (fabio.test.codecs.test_oxdimage.TestOxdSame.test_same) 271s test if images are actually the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 271s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 271s ok 271s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxdSame.test_same 271s test_same (fabio.test.codecs.test_oxdimage.TestOxdBig.test_same) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('d80_60s.img.bz2') 272s INFO:fabio.utils.ExternalResources:Image d80_60s.img.bz2 successfully downloaded. 275s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('d80_60s.edf.bz2') 276s INFO:fabio.utils.ExternalResources:Image d80_60s.edf.bz2 successfully downloaded. 280s WARNING:fabio.edfimage:Unknown compression scheme TY1 280s ok 280s INFO:memProf:Time: 9.219s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxdBig.test_same 280s test_convert (fabio.test.codecs.test_oxdimage.TestConvert.test_convert) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 280s WARNING:fabio.OXDimage:Enforce TY1 compression 280s ok 280s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestConvert.test_convert 280s test_read (fabio.test.codecs.test_kcdimage.TestKcd.test_read) 280s check we can read kcd images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.kcd.bz2') 281s INFO:fabio.utils.ExternalResources:Image i01f0001.kcd.bz2 successfully downloaded. 282s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.edf.bz2') 282s INFO:fabio.utils.ExternalResources:Image i01f0001.edf.bz2 successfully downloaded. 284s ok 284s INFO:memProf:Time: 4.268s RAM: 0.000 Mb fabio.test.codecs.test_kcdimage.TestKcd.test_read 284s test_same (fabio.test.codecs.test_kcdimage.TestKcd.test_same) 284s see if we can read kcd images and if they are the same as the EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.kcd.bz2') 284s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.edf.bz2') 285s ok 285s INFO:memProf:Time: 0.434s RAM: 0.000 Mb fabio.test.codecs.test_kcdimage.TestKcd.test_same 285s test_bug502 (fabio.test.codecs.test_tifimage.TestTif.test_bug502) 285s Test the reading of a frame with wrong Photometric interpretation ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('frame_00017.npy') 286s INFO:fabio.utils.ExternalResources:Image frame_00017.npy.bz2 successfully downloaded. 293s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('frame_00017.tif') 294s INFO:fabio.utils.ExternalResources:Image frame_00017.tif.bz2 successfully downloaded. 302s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 302s ok 302s INFO:memProf:Time: 17.210s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_bug502 302s test_frame (fabio.test.codecs.test_tifimage.TestTif.test_frame) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.bz2') 303s INFO:fabio.utils.ExternalResources:Image Feb09-bright-00.300s_WAXS.bz2 successfully downloaded. 303s WARNING:fabio.TiffIO:Bogus StripByteCounts information 303s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.gz') 303s WARNING:fabio.TiffIO:Bogus StripByteCounts information 303s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS') 303s WARNING:fabio.TiffIO:Bogus StripByteCounts information 303s ok 303s INFO:memProf:Time: 1.168s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_frame 303s test_header (fabio.test.codecs.test_tifimage.TestTif.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.bz2') 303s WARNING:fabio.TiffIO:Bogus StripByteCounts information 303s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.gz') 303s WARNING:fabio.TiffIO:Bogus StripByteCounts information 303s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS') 303s WARNING:fabio.TiffIO:Bogus StripByteCounts information 303s ok 303s INFO:memProf:Time: 0.101s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_header 303s test_read (fabio.test.codecs.test_tifimage.TestTif.test_read) 303s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.bz2') 303s WARNING:fabio.TiffIO:Bogus StripByteCounts information 303s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.gz') 303s WARNING:fabio.TiffIO:Bogus StripByteCounts information 303s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS') 303s WARNING:fabio.TiffIO:Bogus StripByteCounts information 303s ok 303s INFO:memProf:Time: 0.110s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_read 303s test1 (fabio.test.codecs.test_tifimage.TestGzipTif.test1) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('oPPA_5grains_0001.tif.bz2') 304s INFO:fabio.utils.ExternalResources:Image oPPA_5grains_0001.tif.bz2 successfully downloaded. 304s ok 304s INFO:memProf:Time: 0.344s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestGzipTif.test1 304s test1 (fabio.test.codecs.test_tifimage.TestTif_Rect.test1) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('testmap1_0002.tif.bz2') 304s INFO:fabio.utils.ExternalResources:Image testmap1_0002.tif.bz2 successfully downloaded. 304s ok 304s INFO:memProf:Time: 0.140s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_Rect.test1 304s test1 (fabio.test.codecs.test_tifimage.TestTifImage_A0009.test1) 304s Testing packbit comressed data tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('a0009.tif.bz2') 305s INFO:fabio.utils.ExternalResources:Image a0009.tif.bz2 successfully downloaded. 305s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('a0009.edf.bz2') 305s INFO:fabio.utils.ExternalResources:Image a0009.edf.bz2 successfully downloaded. 306s WARNING:fabio.TiffIO:Non standard TIFF. Rows per strip TAG missing 306s WARNING:fabio.TiffIO:Non standard TIFF. Strip byte counts TAG missing 306s ok 306s INFO:memProf:Time: 1.849s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_A0009.test1 306s test1 (fabio.test.codecs.test_tifimage.TestTifImage_fit2d.test1) 306s Testing packbit comressed data tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 306s INFO:fabio.utils.ExternalResources:Image fit2d.tif.bz2 successfully downloaded. 306s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.edf.bz2') 306s INFO:fabio.utils.ExternalResources:Image fit2d.edf.bz2 successfully downloaded. 306s WARNING:fabio.TiffIO:TIFF file tag 270 contains non ASCII/UTF-8 characters. 306s WARNING:fabio.edfimage:Unknown compression scheme FALSE 306s ok 306s INFO:memProf:Time: 0.283s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_fit2d.test1 306s test1 (fabio.test.codecs.test_tifimage.TestTifImage_Packbits.test1) 306s Testing packbit comressed data tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('oPPA_5grains_0001.tif.bz2') 306s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('oPPA_5grains_0001.edf.bz2') 306s INFO:fabio.utils.ExternalResources:Image oPPA_5grains_0001.edf.bz2 successfully downloaded. 307s ok 307s INFO:memProf:Time: 0.479s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_Packbits.test1 307s test1 (fabio.test.codecs.test_tifimage.TestTifImage_Pilatus.test1) 307s Testing pilatus tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus2M.tif.bz2') 307s INFO:fabio.utils.ExternalResources:Image pilatus2M.tif.bz2 successfully downloaded. 315s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus2M.edf.bz2') 316s INFO:fabio.utils.ExternalResources:Image pilatus2M.edf.bz2 successfully downloaded. 324s WARNING:fabio.TiffIO:TIFF file tag 270 contains non ASCII/UTF-8 characters. 324s ok 324s INFO:memProf:Time: 17.588s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_Pilatus.test1 324s test_pil (fabio.test.codecs.test_tifimage.TestTif_Colormap.test_pil) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('indexed_color.tif.bz2') 324s INFO:fabio.utils.ExternalResources:Image indexed_color.tif.bz2 successfully downloaded. 324s ok 324s INFO:memProf:Time: 0.178s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_Colormap.test_pil 324s test_tiffio (fabio.test.codecs.test_tifimage.TestTif_Colormap.test_tiffio) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('indexed_color.tif.bz2') 324s WARNING:fabio.tifimage:Third dimension is the color 324s WARNING:fabio.tifimage:Third dimension is the color 324s WARNING:fabio.tifimage:Third dimension is the color 324s ok 324s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_Colormap.test_tiffio 325s test_all_images (fabio.test.codecs.test_tifimage.TestTif_LibTiffPic.test_all_images) ... INFO:fabio.utils.ExternalResources:Image libtiffpic.tar.gz successfully downloaded. 325s WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/utils/ExternalResources.py:214: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 325s fd.extractall(output) 325s 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif with TiffIO due to Unsupported number of bits for unsigned int: (4, 4, 4), trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif: no tiff reader managed to read the file. 325s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/dscf0013.tif with TiffIO due to could not broadcast input array from shape (10,640,3) into shape (15,640,3), trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/dscf0013.tif with PIL: image file is truncated (1280 bytes not processed) 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/dscf0013.tif: no tiff reader managed to read the file. 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif with TiffIO due to Unsupported number of bits for unsigned int: (10, 10, 10), trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif: no tiff reader managed to read the file. 325s WARNING:fabio.tifimage:Third dimension is the color 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif with TiffIO due to Unsupported number of bits for unsigned int: (12, 12, 12), trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif: no tiff reader managed to read the file. 325s WARNING:fabio.TiffIO:Data at tag id '37439' is smaller than expected 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif: no tiff reader managed to read the file. 325s WARNING:fabio.TiffIO:Data at tag id '37439' is smaller than expected 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif: no tiff reader managed to read the file. 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/zackthecat.tif with TiffIO due to 273 is not in list, trying PIL 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif with TiffIO due to Unsupported number of bits for unsigned int: (10, 10, 10), trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif: no tiff reader managed to read the file. 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-02.tif with TiffIO due to Unsupported number of bits for unsigned int: 2, trying PIL 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif with TiffIO due to Unsupported number of bits for unsigned int: (14, 14, 14), trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif: no tiff reader managed to read the file. 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-08.tif with TiffIO due to cannot reshape array of size 3139 into shape (73,3), trying PIL 325s WARNING:fabio.tifimage:Third dimension is the color 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif with TiffIO due to Unsupported number of bits for unsigned int: (12, 12, 12), trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif: no tiff reader managed to read the file. 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-04.tif with TiffIO due to Unsupported number of bits for unsigned int: 4, trying PIL 325s WARNING:fabio.tifimage:Third dimension is the color 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/ycbcr-cat.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif with TiffIO due to Unsupported number of bits for unsigned int: (14, 14, 14), trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif: no tiff reader managed to read the file. 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif with TiffIO due to Unsupported number of bits for unsigned int: 6, trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif: no tiff reader managed to read the file. 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/fax2d.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif with TiffIO due to Unsupported number of bits for unsigned int: 10, trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif: no tiff reader managed to read the file. 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-16.tif with TiffIO due to cannot reshape array of size 3139 into shape (73,3), trying PIL 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/strike.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 325s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-08.tif with TiffIO due to Unsupported number of bits for unsigned int: (8, 8, 8, 8), trying PIL 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif with TiffIO due to Unsupported number of bits for unsigned int: 12, trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif: no tiff reader managed to read the file. 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/cramps-tile.tif with TiffIO due to cannot reshape array of size 65536 into shape (800), trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/cramps-tile.tif with PIL: image file is truncated (126 bytes not processed) 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/cramps-tile.tif: no tiff reader managed to read the file. 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif with TiffIO due to %d format: a real number is required, not bytes, trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif: no tiff reader managed to read the file. 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/text.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 325s ThunderDecode: Not enough data at scanline 320 (0 != 1512). 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/smallliz.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/g3test.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif with TiffIO due to Unsupported number of bits for unsigned int: 14, trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif: no tiff reader managed to read the file. 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/oxford.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 325s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-08.tif with TiffIO due to Unsupported number of bits for unsigned int: (8, 8, 8, 8), trying PIL 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/quad-tile.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/quad-lzw.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif with TiffIO due to %d format: a real number is required, not bytes, trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif: no tiff reader managed to read the file. 325s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-16.tif with TiffIO due to Unsupported number of bits for unsigned int: (16, 16, 16, 16), trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-16.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-16.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-16.tif: no tiff reader managed to read the file. 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/jim___ah.tif with TiffIO due to Unsupported number of bits for unsigned int: 1, trying PIL 325s WARNING:fabio.tifimage:Third dimension is the color 325s WARNING:fabio.tifimage:Third dimension is the color 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-palette-02.tif with TiffIO due to Unsupported number of bits for unsigned int: 2, trying PIL 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif: no tiff reader managed to read the file. 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif with TiffIO due to Unsupported number of bits for unsigned int: (2, 2, 2), trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif: no tiff reader managed to read the file. 325s WARNING:fabio.tifimage:Third dimension is the color 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-palette-04.tif with TiffIO due to Unsupported number of bits for unsigned int: 4, trying PIL 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif with TiffIO due to Unsupported number of bits for unsigned int: 24, trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif: no tiff reader managed to read the file. 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif with TiffIO due to Unsupported number of bits for unsigned int: (4, 4, 4), trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif: no tiff reader managed to read the file. 325s WARNING:fabio.TiffIO:Data at tag id '37439' is smaller than expected 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif: no tiff reader managed to read the file. 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/ladoga.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 325s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-16.tif with TiffIO due to Unsupported number of bits for unsigned int: (16, 16, 16, 16), trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-16.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-16.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-16.tif: no tiff reader managed to read the file. 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/quad-jpeg.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif with TiffIO due to Unsupported number of bits for unsigned int: (2, 2, 2), trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif: no tiff reader managed to read the file. 325s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif with TiffIO due to cannot reshape array of size 2044 into shape (73,3), trying PIL 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif' mode='rb' closefd=True> 325s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif: no tiff reader managed to read the file. 325s WARNING:fabio.tifimage:Third dimension is the color 325s ok 325s INFO:memProf:Time: 0.861s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_LibTiffPic.test_all_images 325s test_invert (fabio.test.codecs.test_xsdimage.TestXSD.test_invert) 325s Tests that 2 matrixes are invert ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.edf.bz2') 326s INFO:fabio.utils.ExternalResources:Image XSDataImage.edf.bz2 successfully downloaded. 326s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.xml.bz2') 327s INFO:fabio.utils.ExternalResources:Image XSDataImage.xml.bz2 successfully downloaded. 327s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImageInv.xml.bz2') 328s INFO:fabio.utils.ExternalResources:Image XSDataImageInv.xml.bz2 successfully downloaded. 328s ok 328s INFO:memProf:Time: 2.859s RAM: 0.000 Mb fabio.test.codecs.test_xsdimage.TestXSD.test_invert 328s test_read (fabio.test.codecs.test_xsdimage.TestXSD.test_read) 328s Test reading of XSD images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.edf.bz2') 328s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.xml.bz2') 328s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImageInv.xml.bz2') 328s INFO:fabio.test.codecs.test_xsdimage:XSDataImage.xml 667.15 667.1489268499176 328s INFO:fabio.test.codecs.test_xsdimage:XSDataImageInv.xml 0.01 0.010599090552568758 328s ok 328s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.codecs.test_xsdimage.TestXSD.test_read 328s test_same (fabio.test.codecs.test_xsdimage.TestXSD.test_same) 328s test if an image is the same as the EDF equivalent ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.edf.bz2') 328s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.xml.bz2') 328s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImageInv.xml.bz2') 328s ok 328s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_xsdimage.TestXSD.test_same 328s test_memoryleak (fabio.test.codecs.test_raxisimage.TestRaxisImage.test_memoryleak) 328s This test takes a lot of time, so only in debug mode. ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mgzn-20hpt.img.bz2') 329s INFO:fabio.utils.ExternalResources:Image mgzn-20hpt.img.bz2 successfully downloaded. 329s ok 329s INFO:memProf:Time: 1.188s RAM: 0.000 Mb fabio.test.codecs.test_raxisimage.TestRaxisImage.test_memoryleak 329s test_read (fabio.test.codecs.test_raxisimage.TestRaxisImage.test_read) 329s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mgzn-20hpt.img.bz2') 330s ok 330s INFO:memProf:Time: 0.482s RAM: 0.000 Mb fabio.test.codecs.test_raxisimage.TestRaxisImage.test_read 330s test_read (fabio.test.codecs.test_pnmimage.TestPNM.test_read) 330s check we can read pnm images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('image0001.pgm.bz2') 330s INFO:fabio.utils.ExternalResources:Image image0001.pgm.bz2 successfully downloaded. 330s ok 330s INFO:memProf:Time: 0.169s RAM: 0.000 Mb fabio.test.codecs.test_pnmimage.TestPNM.test_read 330s test_write (fabio.test.codecs.test_pnmimage.TestPNM.test_write) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('image0001.pgm.bz2') 330s ok 330s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pnmimage.TestPNM.test_write 330s test_multidim (fabio.test.codecs.test_numpyimage.TestNumpy.test_multidim) ... ok 330s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_numpyimage.TestNumpy.test_multidim 330s test_read (fabio.test.codecs.test_numpyimage.TestNumpy.test_read) 330s check we can read pnm images ... ok 330s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_numpyimage.TestNumpy.test_read 330s test_write (fabio.test.codecs.test_numpyimage.TestNumpy.test_write) 330s check we can write numpy images ... ok 330s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_numpyimage.TestNumpy.test_write 330s test_frame (fabio.test.codecs.test_pilatusimage.TestPilatus.test_frame) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.bz2') 330s INFO:fabio.utils.ExternalResources:Image lysb_5mg-1.90s_SAXS.bz2 successfully downloaded. 331s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.gz') 331s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS') 332s ok 332s INFO:memProf:Time: 2.508s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus.test_frame 332s test_header (fabio.test.codecs.test_pilatusimage.TestPilatus.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.bz2') 332s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.gz') 332s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS') 332s ok 332s INFO:memProf:Time: 0.031s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus.test_header 332s test_read (fabio.test.codecs.test_pilatusimage.TestPilatus.test_read) 332s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.bz2') 332s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.gz') 332s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS') 332s ok 332s INFO:memProf:Time: 0.032s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus.test_read 332s test_header (fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif.bz2') 333s INFO:fabio.utils.ExternalResources:Image Pilatus1M.tif.bz2 successfully downloaded. 333s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 333s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif') 333s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 333s ok 333s INFO:memProf:Time: 0.840s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_header 333s test_read (fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_read) 333s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif.bz2') 333s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 333s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif') 333s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 333s ok 333s INFO:memProf:Time: 0.063s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_read 333s test_bug_479 (fabio.test.codecs.test_eigerimage.TestEiger.test_bug_479) ... WARNING:fabio.eigerimage:hdf5plugin is needed for bitshuffle-LZ4 compression, falling back on gzip (slower) 333s ok 333s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_bug_479 333s test_frames_abort_iteration (fabio.test.codecs.test_eigerimage.TestEiger.test_frames_abort_iteration) ... ok 333s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_frames_abort_iteration 333s test_frames_full_iteration (fabio.test.codecs.test_eigerimage.TestEiger.test_frames_full_iteration) ... ok 333s INFO:memProf:Time: 0.005s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_frames_full_iteration 333s test_frames_random_access (fabio.test.codecs.test_eigerimage.TestEiger.test_frames_random_access) ... ok 333s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_frames_random_access 333s test_open (fabio.test.codecs.test_eigerimage.TestEiger.test_open) 333s check we can read images from Eiger ... ok 333s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_open 333s test_read (fabio.test.codecs.test_eigerimage.TestEiger.test_read) 333s check we can read images from Eiger ... ok 333s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_read 333s test_write (fabio.test.codecs.test_eigerimage.TestEiger.test_write) ... WARNING:fabio.eigerimage:hdf5plugin is needed for bitshuffle-LZ4 compression, falling back on gzip (slower) 333s ok 333s INFO:memProf:Time: 0.008s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_write 333s test_iterate (fabio.test.codecs.test_hdf5image.TestHdf5.test_iterate) ... ok 333s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_iterate 333s test_next_frames (fabio.test.codecs.test_hdf5image.TestHdf5.test_next_frames) 333s check the legacy next API ... ok 333s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_next_frames 333s test_open (fabio.test.codecs.test_hdf5image.TestHdf5.test_open) 333s check we can read images from Eiger ... ok 333s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_open 333s test_read (fabio.test.codecs.test_hdf5image.TestHdf5.test_read) 333s check we can read images from Eiger ... ok 333s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_read 333s test_mask (fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_mask) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.f2d.bz2') 334s INFO:fabio.utils.ExternalResources:Image fit2d.f2d.bz2 successfully downloaded. 334s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 334s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.f2d.bz2') 334s INFO:fabio.utils.ExternalResources:Image Pilatus1M.f2d.bz2 successfully downloaded. 337s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.cbf.bz2') 338s INFO:fabio.utils.ExternalResources:Image Pilatus1M.cbf.bz2 successfully downloaded. 338s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.msk.bz2') 338s INFO:fabio.utils.ExternalResources:Image Pilatus1M.msk.bz2 successfully downloaded. 338s ok 338s INFO:memProf:Time: 4.542s RAM: 0.000 Mb fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_mask 338s test_match (fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_match) 338s test edf and msk are the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.f2d.bz2') 338s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 338s WARNING:fabio.TiffIO:TIFF file tag 270 contains non ASCII/UTF-8 characters. 338s ok 338s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_match 338s test_read (fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_read) 338s Check it reads a mask OK ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.f2d.bz2') 338s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 338s ok 338s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_read 338s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v2.SPE.bz2') 338s INFO:fabio.utils.ExternalResources:Image v2.SPE.bz2 successfully downloaded. 339s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v2_converted.SPE.bz2') 339s INFO:fabio.utils.ExternalResources:Image v2_converted.SPE.bz2 successfully downloaded. 339s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v3.spe.bz2') 339s INFO:fabio.utils.ExternalResources:Image v3.spe.bz2 successfully downloaded. 340s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v3_custom_roi.spe.bz2') 340s INFO:fabio.utils.ExternalResources:Image v3_custom_roi.spe.bz2 successfully downloaded. 340s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v3_2frames.spe.bz2') 340s INFO:fabio.utils.ExternalResources:Image v3_2frames.spe.bz2 successfully downloaded. 343s test_calibration (fabio.test.codecs.test_speimage.TestSpeImage.test_calibration) ... ok 343s INFO:memProf:Time: 0.015s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_calibration 343s test_center_wavelength (fabio.test.codecs.test_speimage.TestSpeImage.test_center_wavelength) ... ok 343s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_center_wavelength 343s test_detector (fabio.test.codecs.test_speimage.TestSpeImage.test_detector) ... ok 343s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_detector 343s test_exposure_time (fabio.test.codecs.test_speimage.TestSpeImage.test_exposure_time) ... ok 343s INFO:memProf:Time: 0.022s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_exposure_time 343s test_fabio_integration (fabio.test.codecs.test_speimage.TestSpeImage.test_fabio_integration) ... ok 343s INFO:memProf:Time: 0.111s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_fabio_integration 343s test_grating (fabio.test.codecs.test_speimage.TestSpeImage.test_grating) ... ok 343s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_grating 343s test_multiple_frames (fabio.test.codecs.test_speimage.TestSpeImage.test_multiple_frames) ... ok 343s INFO:memProf:Time: 0.021s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_multiple_frames 343s test_read_data (fabio.test.codecs.test_speimage.TestSpeImage.test_read_data) ... ok 343s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_read_data 343s test_reading_version2_spe (fabio.test.codecs.test_speimage.TestSpeImage.test_reading_version2_spe) ... ok 343s INFO:memProf:Time: 0.010s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_reading_version2_spe 343s test_roi (fabio.test.codecs.test_speimage.TestSpeImage.test_roi) ... ok 343s INFO:memProf:Time: 0.014s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_roi 343s test_time (fabio.test.codecs.test_speimage.TestSpeImage.test_time) ... ok 343s INFO:memProf:Time: 0.010s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_time 343s test_read_empty_file (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_empty_file) ... ok 343s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_empty_file 343s test_read_failing_file (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_failing_file) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 343s INFO:fabio.utils.ExternalResources:Image rand_uint8.jpg.bz2 successfully downloaded. 343s ok 343s INFO:memProf:Time: 0.139s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_failing_file 343s test_read_missing_file (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_missing_file) ... ok 343s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_missing_file 343s test_read_uint8 (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 343s ok 343s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_uint8 343s test_read_uint8 (fabio.test.codecs.test_jpegimage.TestJpegImageInsideFabio.test_read_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 343s ok 343s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImageInsideFabio.test_read_uint8 343s test_with_pil (fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_with_pil) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 343s ok 343s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_with_pil 343s test_without_pil (fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_without_pil) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 343s ok 343s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_without_pil 343s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_missing_file) ... ok 344s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_missing_file 344s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint16) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint16.jp2.bz2') 344s INFO:fabio.utils.ExternalResources:Image binned_data_uint16.jp2.bz2 successfully downloaded. 344s ok 344s INFO:memProf:Time: 0.224s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint16 344s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint8.jp2.bz2') 344s INFO:fabio.utils.ExternalResources:Image binned_data_uint8.jp2.bz2 successfully downloaded. 344s ok 344s INFO:memProf:Time: 0.219s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint8 344s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_wrong_format) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 344s ok 344s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_wrong_format 344s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_missing_file) ... ok 344s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_missing_file 344s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint16) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint16.jp2.bz2') 344s ok 344s INFO:memProf:Time: 0.005s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint16 344s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint8.jp2.bz2') 344s ok 344s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint8 344s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_wrong_format) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 344s ok 344s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_wrong_format 344s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_missing_file) ... skipped 'glymur is not available or too old' 344s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_missing_file 344s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint16) ... skipped 'glymur is not available or too old' 344s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint16 344s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint8) ... skipped 'glymur is not available or too old' 344s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint8 344s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_wrong_format) ... skipped 'glymur is not available or too old' 344s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_wrong_format 344s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_missing_file) ... ok 344s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_missing_file 344s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint16) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint16.jp2.bz2') 344s ok 344s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint16 344s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint8.jp2.bz2') 344s ok 344s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint8 344s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_wrong_format) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 344s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.bz2 rb 344s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.bz2 rb 344s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.gz rb fabio. 344s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.gz rb fabio. 344s /tmp/fabio_testdata_ubuntu/GE_aSI_detector_image_1529.bz2 rb 344s /tmp/fabio_testdata_ubuntu/GE_aSI_detector_image_1529.gz rb fabio. 344s /tmp/fabio_testdata_ubuntu/corkcont2_H_0089.mccd.bz2 rb 344s /tmp/fabio_testdata_ubuntu/corkcont2_H_0089.mccd.gz rb fabio. 344s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.bz2 rb 344s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.gz rb fabio. 344s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.bz2 rb 344s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.gz rb fabio. 344s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.bz2 rb 344s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.gz rb fabio. 344s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.bz2 rb 344s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.gz rb fabio. 344s /tmp/fabio_testdata_ubuntu/oPPA_5grains_0001.tif.gz rb fabio. 344s /tmp/fabio_testdata_ubuntu/testmap1_0002.tif.gz rb fabio. 344s /tmp/fabio_testdata_ubuntu/testmap1_0002.tif.bz2 rb 344s /tmp/fabio_testdata_ubuntu/fit2d.tif.bz2 rb 344s /tmp/fabio_testdata_ubuntu/oPPA_5grains_0001.tif.bz2 rb 344s /tmp/fabio_testdata_ubuntu/pilatus2M.tif.bz2 rb 344s /tmp/fabio_testdata_ubuntu/indexed_color.tif.gz rb fabio. 344s /tmp/fabio_testdata_ubuntu/indexed_color.tif.bz2 rb 344s /tmp/fabio_testdata_ubuntu/indexed_color.tif.gz rb fabio. 344s /tmp/fabio_testdata_ubuntu/indexed_color.tif.bz2 rb 344s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.bz2 rb 344s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.gz rb fabio. 344s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.bz2 rb 344s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.gz rb fabio. 344s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.bz2 rb 344s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.gz rb fabio. 344s /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 rb 344s /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 rb 344s 0 344s 1 344s 2 344s 3 344s 4 344s 5 344s 6 344s 7 344s 8 344s 9 344s 10 344s 11 344s 12 344s 13 344s 14 344s 15 344s 16 344s 17 344s 18 344s 19 344s 20 344s 21 344s 22 344s 23 344s 24 344s 25 344s 26 344s 27 344s 28 344s 29 344s 30 344s 31 344s 32 344s 33 344s 34 344s 35 344s 36 344s 37 344s 38 344s 39 344s 40 344s 41 344s 42 344s 43 344s 44 344s 45 344s 46 344s 47 344s 48 344s 49 344s jpeg2kimage.PIL: 344s jpeg2kimage.PIL: 344s jpeg2kimage.PIL: 344s jpeg2kimage.PIL: 344s jpeg2kimage.PIL: 344s jpeg2kimage.PIL: 344s jpeg2kimage.PIL: 344s jpeg2kimage.PIL: 344s jpeg2kimage.PIL: 344s jpeg2kimage.PIL: 344s jpeg2kimage.PIL: 344s jpeg2kimage.PIL: ok 344s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_wrong_format 344s test_read (fabio.test.codecs.test_mpaimage.TestMpa.test_read) 344s Test the reading of multiwire images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mpa_test.mpa.bz2') 344s INFO:fabio.utils.ExternalResources:Image mpa_test.mpa.bz2 successfully downloaded. 348s ok 348s INFO:memProf:Time: 4.459s RAM: 0.000 Mb fabio.test.codecs.test_mpaimage.TestMpa.test_read 348s test_read (fabio.test.codecs.test_dm3image.TestDm3Image.test_read) 348s check we can read dm3 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('ref_d20x_310mm.dm3.bz2') 349s INFO:fabio.utils.ExternalResources:Image ref_d20x_310mm.dm3.bz2 successfully downloaded. 353s ok 353s INFO:memProf:Time: 4.719s RAM: 0.000 Mb fabio.test.codecs.test_dm3image.TestDm3Image.test_read 353s test_read (fabio.test.codecs.test_mrcimage.TestMrc.test_read) 353s check we can read mrc images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.map.bz2') 354s INFO:fabio.utils.ExternalResources:Image EMD-3001.map.bz2 successfully downloaded. 354s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.mrc.bz2') 354s INFO:fabio.utils.ExternalResources:Image 0p67_5s_0000.mrc.bz2 successfully downloaded. 371s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.npy.bz2') 371s INFO:fabio.utils.ExternalResources:Image EMD-3001.npy.bz2 successfully downloaded. 371s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.npy.bz2') 372s INFO:fabio.utils.ExternalResources:Image 0p67_5s_0000.npy.bz2 successfully downloaded. 388s INFO:fabio.mrcimage:Expected 'MAP ', got INFO:fabio.mrcimage:Expected 'MAP ', got INFO:fabio.mrcimage:Expected 'MAP ', got ok 388s INFO:memProf:Time: 35.375s RAM: 0.000 Mb fabio.test.codecs.test_mrcimage.TestMrc.test_read 389s test_same (fabio.test.codecs.test_mrcimage.TestMrc.test_same) 389s see if we can read mrc images and if they are the same as the numpy dump ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.map.bz2') 389s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.mrc.bz2') 389s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.npy.bz2') 389s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.npy.bz2') 389s INFO:fabio.test.codecs.test_mrcimage:Comparing files EMD-3001.map and EMD-3001.npy 389s INFO:fabio.mrcimage:Expected 'MAP ', got INFO:fabio.test.codecs.test_mrcimage:Comparing files 0p67_5s_0000.mrc and 0p67_5s_0000.npy 389s ok 389s INFO:memProf:Time: 0.010s RAM: 0.000 Mb fabio.test.codecs.test_mrcimage.TestMrc.test_same 389s test_file_series (fabio.test.codecs.test_pixiimage.TestPixiImage.test_file_series) ... ok 389s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_file_series 389s test_frames_abort_iteration (fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_abort_iteration) ... ok 389s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_abort_iteration 389s test_frames_full_iteration (fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_full_iteration) ... ok 389s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_full_iteration 389s test_frames_random_access (fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_random_access) ... ok 389s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_random_access 389s test_multi_frame (fabio.test.codecs.test_pixiimage.TestPixiImage.test_multi_frame) ... ok 389s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_multi_frame 389s test_single_frame (fabio.test.codecs.test_pixiimage.TestPixiImage.test_single_frame) ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_single_frame 389s test_data (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_data) ... INFO:fabio.esperantoimage:Esperanto accepts only integer data, rounding 389s INFO:fabio.esperantoimage:Padding image to be square, multiple of 4 and of size between 256 and 4096 389s ok 389s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_data 389s test_header (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('sucrose_1s__1_1.esperanto.bz2') 389s INFO:fabio.utils.ExternalResources:Image sucrose_1s__1_1.esperanto.bz2 successfully downloaded. 391s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_uzn5qa1x_ubuntu/4bytes_long.esperanto 391s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_uzn5qa1x_ubuntu/agi_bitfield.esperanto 392s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.esperanto.bz2') 392s INFO:fabio.utils.ExternalResources:Image reference.esperanto.bz2 successfully downloaded. 392s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_uzn5qa1x_ubuntu/4bytes_long.esperanto 392s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_uzn5qa1x_ubuntu/agi_bitfield.esperanto 392s ok 392s INFO:memProf:Time: 3.390s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_header 392s test_read (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_read) 392s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('sucrose_1s__1_1.esperanto.bz2') 393s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.esperanto.bz2') 393s ok 393s INFO:memProf:Time: 1.132s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_read 393s test_values (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_values) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.esperanto.bz2') 393s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.npy.bz2') 393s INFO:fabio.utils.ExternalResources:Image reference.npy.bz2 successfully downloaded. 394s ok 394s INFO:memProf:Time: 0.487s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_values 394s test_frames_abort_iteration (fabio.test.codecs.test_limaimage.TestLima.test_frames_abort_iteration) ... ok 394s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_frames_abort_iteration 394s test_frames_full_iteration (fabio.test.codecs.test_limaimage.TestLima.test_frames_full_iteration) ... ok 394s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_frames_full_iteration 394s test_frames_random_access (fabio.test.codecs.test_limaimage.TestLima.test_frames_random_access) ... ok 394s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_frames_random_access 394s test_identify (fabio.test.codecs.test_limaimage.TestLima.test_identify) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('output_sparse_0_00000.h5') 394s INFO:fabio.utils.ExternalResources:Image output_sparse_0_00000.h5.bz2 successfully downloaded. 396s ok 396s INFO:memProf:Time: 2.391s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_identify 396s test_open (fabio.test.codecs.test_limaimage.TestLima.test_open) 396s test_open check we can read images from Lima ... ok 396s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_open 396s test_read (fabio.test.codecs.test_limaimage.TestLima.test_read) 396s test_read check we can read images from Lima ... ok 396s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_read 396s test_write (fabio.test.codecs.test_limaimage.TestLima.test_write) ... WARNING:fabio.limaimage:hdf5plugin is needed for bitshuffle-LZ4 compression, falling back on gzip (slower) 396s ok 396s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_write 396s test_read (fabio.test.codecs.test_hipicimage.TestHiPiCImage.test_read) 396s check we can read dm3 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Radiograph_SP8_BL47XU_HiPicimage.img.bz2') 397s INFO:fabio.utils.ExternalResources:Image Radiograph_SP8_BL47XU_HiPicimage.img.bz2 successfully downloaded. 398s ok 398s INFO:memProf:Time: 2.540s RAM: 0.000 Mb fabio.test.codecs.test_hipicimage.TestHiPiCImage.test_read 398s test_read (fabio.test.codecs.test_binaryimage.TestBinaryImage.test_read) 398s check we can read images from Eiger ... ok 398s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_binaryimage.TestBinaryImage.test_read 398s test_write (fabio.test.codecs.test_binaryimage.TestBinaryImage.test_write) ... ok 398s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_binaryimage.TestBinaryImage.test_write 398s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0001.ccd') 399s INFO:fabio.utils.ExternalResources:Image scan0001.ccd.bz2 successfully downloaded. 399s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0005.ccd') 399s INFO:fabio.utils.ExternalResources:Image scan0005.ccd.bz2 successfully downloaded. 399s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0050.ccd') 399s INFO:fabio.utils.ExternalResources:Image scan0050.ccd.bz2 successfully downloaded. 399s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0059.ccd') 399s INFO:fabio.utils.ExternalResources:Image scan0059.ccd.bz2 successfully downloaded. 399s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0066.ccd') 399s INFO:fabio.utils.ExternalResources:Image scan0066.ccd.bz2 successfully downloaded. 399s test_parse (fabio.test.codecs.test_xcaliburimage.TestCcdCharacteristiscs.test_parse) ... ok 399s INFO:memProf:Time: 0.007s RAM: 0.000 Mb fabio.test.codecs.test_xcaliburimage.TestCcdCharacteristiscs.test_parse 399s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.cbf') 399s test_decomposition (fabio.test.codecs.test_xcaliburimage.testXcalibureImage.test_decomposition) ... WARNING:fabio.test.codecs.test_xcaliburimage:PyFAI not available: only a coarse description of the mask is provided 399s WARNING:fabio.xcaliburimage:PyFAI not available: only a coarse description of the mask is provided 399s ok 399s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.codecs.test_xcaliburimage.testXcalibureImage.test_decomposition 399s test_compress_decode_field_overflow (fabio.test.test_agi_bitfield.TestUtil.test_compress_decode_field_overflow) ... ok 399s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_compress_decode_field_overflow 399s test_compress_decompress_field_small (fabio.test.test_agi_bitfield.TestUtil.test_compress_decompress_field_small) ... ok 399s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_compress_decompress_field_small 399s test_full_compress_decompress_field (fabio.test.test_agi_bitfield.TestUtil.test_full_compress_decompress_field) ... ok 399s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_full_compress_decompress_field 399s test_get_fieldsize (fabio.test.test_agi_bitfield.TestUtil.test_get_fieldsize) ... ok 399s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_get_fieldsize 399s test_mask_conv (fabio.test.test_agi_bitfield.TestUtil.test_mask_conv) ... ok 399s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_mask_conv 399s test_compress_row_small (fabio.test.test_agi_bitfield.TestRow.test_compress_row_small) ... ok 399s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestRow.test_compress_row_small 399s test_compress_row_zero (fabio.test.test_agi_bitfield.TestRow.test_compress_row_zero) ... ok 399s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestRow.test_compress_row_zero 399s test_full_rand (fabio.test.test_agi_bitfield.TestCompression.test_full_rand) ... ok 399s INFO:memProf:Time: 0.052s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestCompression.test_full_rand 399s test_cython (fabio.test.test_densification.TestDensification.test_cython) ... ok 399s INFO:memProf:Time: 0.061s RAM: 0.000 Mb fabio.test.test_densification.TestDensification.test_cython 399s test_rng_normal (fabio.test.test_densification.TestDensification.test_rng_normal) ... ok 399s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_densification.TestDensification.test_rng_normal 399s test_rng_uniform (fabio.test.test_densification.TestDensification.test_rng_uniform) ... ok 399s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_densification.TestDensification.test_rng_uniform 399s 399s /tmp/fabio_uzn5qa1x_ubuntu/lima3d.h5 399s /tmp/fabio_uzn5qa1x_ubuntu/binary.npy 399s speed-up: 22.096876606178956 399s ##### 0 399s ##### 1 399s ##### 2 399s ##### 3 399s ##### 4 399s ##### 5 399s ##### 6 399s ##### 7 399s aaa [ ] 7% toto aaa [■■■■■■ ] 70% toto aaa [■■■■■■■■■■] 132% toto setUpClass (fabio.test.test_io_limits.TestEdf) ... skipped 'test requires debug level logging' 399s setUpClass (fabio.test.test_io_limits.TestTiff) ... skipped 'test requires debug level logging' 399s test_coverage (fabio.test.test_utils_cli.TestUtilShell.test_coverage) 399s test function coverage ... ok 399s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_utils_cli.TestUtilShell.test_coverage 399s test_expand_args (fabio.test.test_utils_cli.TestUtilShell.test_expand_args) ... ok 399s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_utils_cli.TestUtilShell.test_expand_args 399s 399s ---------------------------------------------------------------------- 399s Ran 356 tests in 269.691s 399s 399s OK (skipped=7) 400s autopkgtest [09:42:16]: test command1: -----------------------] 400s autopkgtest [09:42:16]: test command1: - - - - - - - - - - results - - - - - - - - - - 400s command1 PASS 401s autopkgtest [09:42:17]: @@@@@@@@@@@@@@@@@@@@ summary 401s command1 PASS 405s nova [W] Skipping flock for amd64 405s Creating nova instance adt-plucky-amd64-python-fabio-20241115-093536-juju-7f2275-prod-proposed-migration-environment-20-aada3985-6432-4452-bfc2-3011d417a864 from image adt/ubuntu-plucky-amd64-server-20241114.img (UUID 79d80331-8736-463c-82c6-8c9e13c0a4ca)...