0s autopkgtest [09:22:13]: starting date and time: 2024-11-15 09:22:13+0000 0s autopkgtest [09:22:13]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [09:22:13]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.pwjyq2t9/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:matplotlib --apt-upgrade python-fabio --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=matplotlib/3.8.3-3ubuntu1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-13.secgroup --name adt-plucky-amd64-python-fabio-20241115-092213-juju-7f2275-prod-proposed-migration-environment-20-4a223b5b-5673-4738-86a1-f56a63f7d1e9 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 37s autopkgtest [09:22:50]: testbed dpkg architecture: amd64 37s autopkgtest [09:22:50]: testbed apt version: 2.9.8 37s autopkgtest [09:22:50]: @@@@@@@@@@@@@@@@@@@@ test bed setup 38s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 39s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 39s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [95.8 kB] 39s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [1060 kB] 39s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [16.1 kB] 39s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [176 kB] 39s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [109 kB] 39s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [32.6 kB] 39s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [297 kB] 39s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [835 kB] 39s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [1032 B] 39s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [9692 B] 39s Fetched 2714 kB in 1s (3191 kB/s) 39s Reading package lists... 41s Reading package lists... 41s Building dependency tree... 41s Reading state information... 42s Calculating upgrade... 42s The following packages will be upgraded: 42s firmware-sof-signed grub-common grub-pc grub-pc-bin grub2-common libcap-ng0 42s libexpat1 lxd-installer man-db pastebinit python3-systemd xfsprogs 42s 12 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 42s Need to get 13.6 MB of archives. 42s After this operation, 477 kB of additional disk space will be used. 42s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 firmware-sof-signed all 2024.06-1ubuntu2 [7083 kB] 43s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libcap-ng0 amd64 0.8.5-3build1 [15.6 kB] 43s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libexpat1 amd64 2.6.4-1 [94.9 kB] 43s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 man-db amd64 2.13.0-1 [1352 kB] 43s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 grub2-common amd64 2.12-5ubuntu7 [672 kB] 43s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 grub-pc amd64 2.12-5ubuntu7 [137 kB] 43s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 grub-pc-bin amd64 2.12-5ubuntu7 [1127 kB] 43s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 grub-common amd64 2.12-5ubuntu7 [2110 kB] 43s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 lxd-installer all 9 [5084 B] 43s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 pastebinit all 1.7.1-1 [14.9 kB] 43s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-systemd amd64 235-1build5 [45.7 kB] 43s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 xfsprogs amd64 6.8.0-2.2ubuntu2 [926 kB] 43s Preconfiguring packages ... 43s Fetched 13.6 MB in 1s (13.9 MB/s) 43s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75542 files and directories currently installed.) 43s Preparing to unpack .../firmware-sof-signed_2024.06-1ubuntu2_all.deb ... 43s Unpacking firmware-sof-signed (2024.06-1ubuntu2) over (2024.06-1ubuntu1) ... 43s Preparing to unpack .../libcap-ng0_0.8.5-3build1_amd64.deb ... 43s Unpacking libcap-ng0:amd64 (0.8.5-3build1) over (0.8.5-1) ... 43s Setting up libcap-ng0:amd64 (0.8.5-3build1) ... 44s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75568 files and directories currently installed.) 44s Preparing to unpack .../0-libexpat1_2.6.4-1_amd64.deb ... 44s Unpacking libexpat1:amd64 (2.6.4-1) over (2.6.2-2) ... 44s Preparing to unpack .../1-man-db_2.13.0-1_amd64.deb ... 44s Unpacking man-db (2.13.0-1) over (2.12.1-3) ... 44s Preparing to unpack .../2-grub2-common_2.12-5ubuntu7_amd64.deb ... 44s Unpacking grub2-common (2.12-5ubuntu7) over (2.12-5ubuntu5.1) ... 44s Preparing to unpack .../3-grub-pc_2.12-5ubuntu7_amd64.deb ... 44s Unpacking grub-pc (2.12-5ubuntu7) over (2.12-5ubuntu5.1) ... 44s Preparing to unpack .../4-grub-pc-bin_2.12-5ubuntu7_amd64.deb ... 44s Unpacking grub-pc-bin (2.12-5ubuntu7) over (2.12-5ubuntu5.1) ... 44s Preparing to unpack .../5-grub-common_2.12-5ubuntu7_amd64.deb ... 44s Unpacking grub-common (2.12-5ubuntu7) over (2.12-5ubuntu5.1) ... 44s Preparing to unpack .../6-lxd-installer_9_all.deb ... 44s Unpacking lxd-installer (9) over (8) ... 44s Preparing to unpack .../7-pastebinit_1.7.1-1_all.deb ... 44s Unpacking pastebinit (1.7.1-1) over (1.7.0-1) ... 44s Preparing to unpack .../8-python3-systemd_235-1build5_amd64.deb ... 44s Unpacking python3-systemd (235-1build5) over (235-1build4) ... 44s Preparing to unpack .../9-xfsprogs_6.8.0-2.2ubuntu2_amd64.deb ... 44s Unpacking xfsprogs (6.8.0-2.2ubuntu2) over (6.8.0-2.2ubuntu1) ... 44s Setting up libexpat1:amd64 (2.6.4-1) ... 44s Setting up firmware-sof-signed (2024.06-1ubuntu2) ... 44s Setting up pastebinit (1.7.1-1) ... 44s Setting up man-db (2.13.0-1) ... 44s Updating database of manual pages ... 46s man-db.service is a disabled or a static unit not running, not starting it. 46s Setting up grub-common (2.12-5ubuntu7) ... 46s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults 47s Setting up xfsprogs (6.8.0-2.2ubuntu2) ... 47s update-initramfs: deferring update (trigger activated) 47s Setting up lxd-installer (9) ... 48s Setting up python3-systemd (235-1build5) ... 48s Setting up grub2-common (2.12-5ubuntu7) ... 48s Setting up grub-pc-bin (2.12-5ubuntu7) ... 48s Setting up grub-pc (2.12-5ubuntu7) ... 48s Installing for i386-pc platform. 48s Installation finished. No error reported. 49s Sourcing file `/etc/default/grub' 49s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 49s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 49s Generating grub configuration file ... 49s Found linux image: /boot/vmlinuz-6.11.0-8-generic 49s Found initrd image: /boot/initrd.img-6.11.0-8-generic 49s Warning: os-prober will not be executed to detect other bootable partitions. 49s Systems on them will not be added to the GRUB boot configuration. 49s Check GRUB_DISABLE_OS_PROBER documentation entry. 49s Adding boot menu entry for UEFI Firmware Settings ... 49s done 49s Processing triggers for libc-bin (2.40-1ubuntu3) ... 49s Processing triggers for install-info (7.1.1-1) ... 49s Processing triggers for initramfs-tools (0.142ubuntu34) ... 49s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic 49s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 57s Reading package lists... 57s Building dependency tree... 57s Reading state information... 58s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 58s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 58s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 58s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 58s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 59s Reading package lists... 59s Reading package lists... 59s Building dependency tree... 59s Reading state information... 59s Calculating upgrade... 60s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 60s Reading package lists... 60s Building dependency tree... 60s Reading state information... 60s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 60s autopkgtest [09:23:13]: rebooting testbed after setup commands that affected boot 64s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 78s autopkgtest [09:23:31]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 13:41:20 UTC 2024 80s autopkgtest [09:23:33]: @@@@@@@@@@@@@@@@@@@@ apt-source python-fabio 83s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-fabio 2024.4.0-2 (dsc) [3002 B] 83s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-fabio 2024.4.0-2 (tar) [726 kB] 83s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-fabio 2024.4.0-2 (diff) [9092 B] 83s gpgv: Signature made Mon May 20 16:56:00 2024 UTC 83s gpgv: using RSA key 9B03EBB98300DF97C2B123BFCC8C6BDD1403F4CA 83s gpgv: issuer "roehling@debian.org" 83s gpgv: Can't check signature: No public key 83s dpkg-source: warning: cannot verify inline signature for ./python-fabio_2024.4.0-2.dsc: no acceptable signature found 83s autopkgtest [09:23:36]: testing package python-fabio version 2024.4.0-2 84s autopkgtest [09:23:37]: build not needed 84s autopkgtest [09:23:37]: test command1: preparing testbed 85s Reading package lists... 85s Building dependency tree... 85s Reading state information... 85s Starting pkgProblemResolver with broken count: 0 85s Starting 2 pkgProblemResolver with broken count: 0 86s Done 86s The following additional packages will be installed: 86s blt fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 86s fonts-lyx libaec0 libavahi-client3 libavahi-common-data libavahi-common3 86s libblas3 libcups2t64 libdeflate0 libdouble-conversion3 libdrm-amdgpu1 86s libdrm-intel1 libdrm-radeon1 libegl-mesa0 libegl1 libfontconfig1 libgbm1 86s libgfortran5 libgl1 libgl1-mesa-dri libglapi-mesa libglvnd0 libglx-mesa0 86s libglx0 libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-103-1t64 86s libhdf5-hl-100t64 libice6 libimagequant0 libinput-bin libinput10 libjbig0 86s libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui liblapack3 liblbfgsb0 86s liblcms2-2 liblerc4 liblzf1 libmd4c0 libmtdev1t64 libopenjp2-7 libpciaccess0 86s libpcre2-16-0 libqhull-r8.0 libqt5core5t64 libqt5dbus5t64 libqt5designer5 86s libqt5gui5t64 libqt5help5 libqt5network5t64 libqt5printsupport5t64 86s libqt5sql5t64 libqt5test5t64 libqt5widgets5t64 libqt5xml5t64 libraqm0 86s libsharpyuv0 libsm6 libsz2 libtcl8.6 libtiff6 libtk8.6 libvulkan1 86s libwacom-common libwacom9 libwayland-client0 libwayland-server0 libwebp7 86s libwebpdemux2 libwebpmux3 libx11-xcb1 libxcb-dri2-0 libxcb-dri3-0 86s libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 86s libxcb-randr0 libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 86s libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 86s libxcb-xkb1 libxfixes3 libxft2 libxkbcommon-x11-0 libxrender1 libxshmfence1 86s libxslt1.1 libxss1 libxxf86vm1 mesa-libgallium python-matplotlib-data 86s python3-all python3-appdirs python3-brotli python3-contourpy python3-cycler 86s python3-dateutil python3-decorator python3-fabio python3-fonttools 86s python3-fs python3-h5py python3-h5py-serial python3-kiwisolver python3-lxml 86s python3-lz4 python3-matplotlib python3-mpmath python3-numpy 86s python3-packaging python3-pil python3-pil.imagetk python3-pyqt5 86s python3-pyqt5.sip python3-scipy python3-six python3-sympy python3-tk 86s python3-tz python3-ufolib2 python3.12-tk tk8.6-blt2.5 unicode-data 86s x11-common 86s Suggested packages: 86s blt-demo cups-common libjs-jquery-ui-docs liblcms2-utils libthai0 86s qgnomeplatform-qt5 qt5-image-formats-plugins tcl8.6 tk8.6 libwacom-bin 86s python-cycler-doc python-fabio-doc python-h5py-doc python-lxml-doc 86s cm-super-minimal dvipng ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0 86s inkscape ipython3 librsvg2-common python-matplotlib-doc python3-cairocffi 86s python3-gi-cairo python3-gobject python3-sip python3-tornado 86s texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2 gcc 86s gfortran python-numpy-doc python3-dev python3-pytest python-pil-doc 86s python-scipy-doc texlive-fonts-extra python-sympy-doc tix python3-tk-dbg 86s python3.13-tk 86s Recommended packages: 86s libgl1-amber-dri javascript-common qttranslations5-l10n libqt5svg5 86s qt5-gtk-platformtheme qtwayland5 libqt5sql5-sqlite | libqt5sql5-mysql 86s | libqt5sql5-odbc | libqt5sql5-psql | libqt5sql5-tds | libqt5sql5-ibase 86s mesa-vulkan-drivers | vulkan-icd python3-bs4 python3-cssselect 86s python3-html5lib python3-olefile g++ | c++-compiler isympy-common 86s The following NEW packages will be installed: 86s autopkgtest-satdep blt fontconfig fontconfig-config fonts-dejavu-core 86s fonts-dejavu-mono fonts-lyx libaec0 libavahi-client3 libavahi-common-data 86s libavahi-common3 libblas3 libcups2t64 libdeflate0 libdouble-conversion3 86s libdrm-amdgpu1 libdrm-intel1 libdrm-radeon1 libegl-mesa0 libegl1 86s libfontconfig1 libgbm1 libgfortran5 libgl1 libgl1-mesa-dri libglapi-mesa 86s libglvnd0 libglx-mesa0 libglx0 libgomp1 libgraphite2-3 libharfbuzz0b 86s libhdf5-103-1t64 libhdf5-hl-100t64 libice6 libimagequant0 libinput-bin 86s libinput10 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui 86s liblapack3 liblbfgsb0 liblcms2-2 liblerc4 liblzf1 libmd4c0 libmtdev1t64 86s libopenjp2-7 libpciaccess0 libpcre2-16-0 libqhull-r8.0 libqt5core5t64 86s libqt5dbus5t64 libqt5designer5 libqt5gui5t64 libqt5help5 libqt5network5t64 86s libqt5printsupport5t64 libqt5sql5t64 libqt5test5t64 libqt5widgets5t64 86s libqt5xml5t64 libraqm0 libsharpyuv0 libsm6 libsz2 libtcl8.6 libtiff6 86s libtk8.6 libvulkan1 libwacom-common libwacom9 libwayland-client0 86s libwayland-server0 libwebp7 libwebpdemux2 libwebpmux3 libx11-xcb1 86s libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 86s libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0 86s libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 86s libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxfixes3 86s libxft2 libxkbcommon-x11-0 libxrender1 libxshmfence1 libxslt1.1 libxss1 86s libxxf86vm1 mesa-libgallium python-matplotlib-data python3-all 86s python3-appdirs python3-brotli python3-contourpy python3-cycler 86s python3-dateutil python3-decorator python3-fabio python3-fonttools 86s python3-fs python3-h5py python3-h5py-serial python3-kiwisolver python3-lxml 86s python3-lz4 python3-matplotlib python3-mpmath python3-numpy 86s python3-packaging python3-pil python3-pil.imagetk python3-pyqt5 86s python3-pyqt5.sip python3-scipy python3-six python3-sympy python3-tk 86s python3-tz python3-ufolib2 python3.12-tk tk8.6-blt2.5 unicode-data 86s x11-common 86s 0 upgraded, 142 newly installed, 0 to remove and 0 not upgraded. 86s Need to get 90.6 MB/90.6 MB of archives. 86s After this operation, 368 MB of additional disk space will be used. 86s Get:1 /tmp/autopkgtest.yZn7qO/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [728 B] 86s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.15+dfsg-2 [1085 kB] 87s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 87s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 87s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB] 87s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB] 87s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 87s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 87s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 87s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 87s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.15-1 [862 kB] 87s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7build1 [630 kB] 87s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 blt amd64 2.5.3+dfsg-7build1 [4840 B] 87s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB] 87s Get:15 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-lyx all 2.4.2.1-1 [171 kB] 87s Get:16 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 87s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libavahi-common-data amd64 0.8-13ubuntu6 [29.7 kB] 87s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 libavahi-common3 amd64 0.8-13ubuntu6 [23.3 kB] 87s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libavahi-client3 amd64 0.8-13ubuntu6 [26.8 kB] 87s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-3build2 [247 kB] 87s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libcups2t64 amd64 2.4.10-1ubuntu2 [271 kB] 87s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.22-1 [64.5 kB] 87s Get:23 http://ftpmaster.internal/ubuntu plucky/universe amd64 libdouble-conversion3 amd64 3.3.0-1build1 [40.3 kB] 87s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libdrm-amdgpu1 amd64 2.4.123-1 [21.7 kB] 87s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libpciaccess0 amd64 0.17-3build1 [18.6 kB] 87s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libdrm-intel1 amd64 2.4.123-1 [68.8 kB] 87s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libdrm-radeon1 amd64 2.4.123-1 [25.3 kB] 87s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libwayland-server0 amd64 1.23.0-1 [35.1 kB] 87s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-randr0 amd64 1.17.0-2 [17.9 kB] 87s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libglapi-mesa amd64 24.2.3-1ubuntu1 [42.4 kB] 87s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libx11-xcb1 amd64 2:1.8.10-2 [7944 B] 87s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-dri2-0 amd64 1.17.0-2 [7222 B] 87s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-dri3-0 amd64 1.17.0-2 [7508 B] 87s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-present0 amd64 1.17.0-2 [6064 B] 87s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-sync1 amd64 1.17.0-2 [9312 B] 87s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-xfixes0 amd64 1.17.0-2 [10.2 kB] 87s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libxshmfence1 amd64 1.3-1build5 [4764 B] 87s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 mesa-libgallium amd64 24.2.3-1ubuntu1 [9904 kB] 88s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libgbm1 amd64 24.2.3-1ubuntu1 [32.0 kB] 88s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libwayland-client0 amd64 1.23.0-1 [27.1 kB] 88s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 88s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libegl-mesa0 amd64 24.2.3-1ubuntu1 [129 kB] 88s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-8ubuntu1 [909 kB] 88s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libvulkan1 amd64 1.3.296.0-1 [143 kB] 88s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libgl1-mesa-dri amd64 24.2.3-1ubuntu1 [34.4 kB] 88s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-glx0 amd64 1.17.0-2 [24.8 kB] 88s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libxfixes3 amd64 1:6.0.0-2build1 [10.8 kB] 88s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libxxf86vm1 amd64 1:1.1.4-1build4 [9282 B] 88s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libglx-mesa0 amd64 24.2.3-1ubuntu1 [153 kB] 88s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-8ubuntu1 [148 kB] 88s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 88s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.0.1-1 [540 kB] 88s Get:53 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 88s Get:54 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-103-1t64 amd64 1.10.10+repack-4ubuntu3 [1280 kB] 88s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-4ubuntu3 [56.6 kB] 88s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 88s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libimagequant0 amd64 2.18.0-1build1 [36.3 kB] 88s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libwacom-common all 2.13.0-1 [98.6 kB] 88s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libwacom9 amd64 2.13.0-1 [25.1 kB] 88s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libinput-bin amd64 1.26.2-1 [22.8 kB] 88s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libmtdev1t64 amd64 1.1.6-1.2 [14.4 kB] 88s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libinput10 amd64 1.26.2-1 [137 kB] 88s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-2ubuntu2 [150 kB] 88s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 88s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 88s Get:66 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 88s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-3build2 [2668 kB] 88s Get:68 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblbfgsb0 amd64 3.0+dfsg.4-1build1 [29.9 kB] 88s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 liblcms2-2 amd64 2.16-2 [212 kB] 88s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-4ubuntu2 [179 kB] 88s Get:71 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblzf1 amd64 3.6-4 [7624 B] 88s Get:72 http://ftpmaster.internal/ubuntu plucky/universe amd64 libmd4c0 amd64 0.5.2-2 [50.1 kB] 88s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.42-4ubuntu3 [214 kB] 88s Get:74 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqhull-r8.0 amd64 2020.2-6build1 [193 kB] 88s Get:75 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5core5t64 amd64 5.15.15+dfsg-1ubuntu1 [2036 kB] 88s Get:76 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5dbus5t64 amd64 5.15.15+dfsg-1ubuntu1 [221 kB] 88s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libglvnd0 amd64 1.7.0-1build1 [69.6 kB] 88s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libegl1 amd64 1.7.0-1build1 [28.7 kB] 88s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 libglx0 amd64 1.7.0-1build1 [38.6 kB] 88s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 libgl1 amd64 1.7.0-1build1 [102 kB] 88s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5network5t64 amd64 5.15.15+dfsg-1ubuntu1 [724 kB] 88s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 88s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-icccm4 amd64 0.4.2-1 [11.1 kB] 88s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-util1 amd64 0.4.0-1build3 [10.7 kB] 88s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-image0 amd64 0.4.0-2build1 [10.8 kB] 88s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-keysyms1 amd64 0.4.0-1build4 [7956 B] 88s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 88s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render-util0 amd64 0.3.9-1build4 [9608 B] 88s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shape0 amd64 1.17.0-2 [6092 B] 88s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-xinerama0 amd64 1.17.0-2 [5412 B] 88s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-xinput0 amd64 1.17.0-2 [33.2 kB] 88s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-xkb1 amd64 1.17.0-2 [32.3 kB] 88s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 libxkbcommon-x11-0 amd64 1.6.0-1build1 [14.5 kB] 88s Get:94 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5gui5t64 amd64 5.15.15+dfsg-1ubuntu1 [3791 kB] 89s Get:95 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5widgets5t64 amd64 5.15.15+dfsg-1ubuntu1 [2561 kB] 89s Get:96 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5xml5t64 amd64 5.15.15+dfsg-1ubuntu1 [124 kB] 89s Get:97 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5designer5 amd64 5.15.15-2 [2827 kB] 89s Get:98 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5sql5t64 amd64 5.15.15+dfsg-1ubuntu1 [122 kB] 89s Get:99 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5help5 amd64 5.15.15-2 [161 kB] 89s Get:100 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5printsupport5t64 amd64 5.15.15+dfsg-1ubuntu1 [208 kB] 89s Get:101 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5test5t64 amd64 5.15.15+dfsg-1ubuntu1 [149 kB] 89s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libraqm0 amd64 0.10.1-1build1 [15.0 kB] 89s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [17.5 kB] 89s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 89s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.4.0-0.1 [231 kB] 89s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 89s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebpdemux2 amd64 1.4.0-0.1 [12.4 kB] 89s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebpmux3 amd64 1.4.0-0.1 [25.8 kB] 89s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 libxslt1.1 amd64 1.1.39-0exp1ubuntu1 [169 kB] 89s Get:110 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 python-matplotlib-data all 3.8.3-3ubuntu1 [2928 kB] 89s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-all amd64 3.12.6-0ubuntu1 [886 B] 89s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-appdirs all 1.4.4-4 [10.9 kB] 89s Get:113 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-brotli amd64 1.1.0-2build2 [332 kB] 89s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-numpy amd64 1:1.26.4+ds-11build1 [4479 kB] 90s Get:115 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-contourpy amd64 1.3.0-2 [217 kB] 90s Get:116 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-cycler all 0.12.1-1 [9716 B] 90s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-six all 1.16.0-7 [13.1 kB] 90s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dateutil all 2.9.0-2 [80.3 kB] 90s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-decorator all 5.1.1-5 [10.1 kB] 90s Get:120 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-scipy amd64 1.13.1-5 [18.2 MB] 90s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-ufolib2 all 0.16.1+dfsg1-1 [33.4 kB] 90s Get:122 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-mpmath all 1.3.0-1 [425 kB] 90s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-sympy all 1.13.3-1 [4228 kB] 90s Get:124 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-tz all 2024.1-2 [31.4 kB] 90s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-fs all 2.4.16-4 [91.3 kB] 90s Get:126 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lxml amd64 5.3.0-1 [1282 kB] 91s Get:127 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-lz4 amd64 4.0.2+dfsg-1build4 [26.2 kB] 91s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 unicode-data all 15.1.0-1 [8878 kB] 91s Get:129 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-fonttools amd64 4.46.0-1build2 [1436 kB] 91s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-h5py-serial amd64 3.11.0-5ubuntu1 [1107 kB] 91s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-h5py all 3.11.0-5ubuntu1 [7974 B] 91s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-kiwisolver amd64 1.4.7-2build1 [70.3 kB] 91s Get:133 http://ftpmaster.internal/ubuntu plucky/main amd64 libopenjp2-7 amd64 2.5.0-2ubuntu1 [184 kB] 91s Get:134 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-pil amd64 10.4.0-1ubuntu1 [463 kB] 91s Get:135 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12-tk amd64 3.12.7-3 [116 kB] 91s Get:136 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-tk amd64 3.12.6-1ubuntu1 [9806 B] 91s Get:137 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pil.imagetk amd64 10.4.0-1ubuntu1 [9394 B] 91s Get:138 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-packaging all 24.1-1 [41.4 kB] 91s Get:139 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 python3-matplotlib amd64 3.8.3-3ubuntu1 [4691 kB] 91s Get:140 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyqt5.sip amd64 12.15.0-1build1 [78.3 kB] 91s Get:141 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyqt5 amd64 5.15.11+dfsg-1build1 [2726 kB] 91s Get:142 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-fabio amd64 2024.4.0-2 [629 kB] 92s Fetched 90.6 MB in 6s (16.4 MB/s) 92s Selecting previously unselected package libtcl8.6:amd64. 92s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75575 files and directories currently installed.) 92s Preparing to unpack .../000-libtcl8.6_8.6.15+dfsg-2_amd64.deb ... 92s Unpacking libtcl8.6:amd64 (8.6.15+dfsg-2) ... 92s Selecting previously unselected package fonts-dejavu-mono. 92s Preparing to unpack .../001-fonts-dejavu-mono_2.37-8_all.deb ... 92s Unpacking fonts-dejavu-mono (2.37-8) ... 92s Selecting previously unselected package fonts-dejavu-core. 92s Preparing to unpack .../002-fonts-dejavu-core_2.37-8_all.deb ... 92s Unpacking fonts-dejavu-core (2.37-8) ... 92s Selecting previously unselected package fontconfig-config. 92s Preparing to unpack .../003-fontconfig-config_2.15.0-1.1ubuntu2_amd64.deb ... 92s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 93s Selecting previously unselected package libfontconfig1:amd64. 93s Preparing to unpack .../004-libfontconfig1_2.15.0-1.1ubuntu2_amd64.deb ... 93s Unpacking libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ... 93s Selecting previously unselected package libxrender1:amd64. 93s Preparing to unpack .../005-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 93s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 93s Selecting previously unselected package libxft2:amd64. 93s Preparing to unpack .../006-libxft2_2.3.6-1build1_amd64.deb ... 93s Unpacking libxft2:amd64 (2.3.6-1build1) ... 93s Selecting previously unselected package x11-common. 93s Preparing to unpack .../007-x11-common_1%3a7.7+23ubuntu3_all.deb ... 93s Unpacking x11-common (1:7.7+23ubuntu3) ... 93s Selecting previously unselected package libxss1:amd64. 93s Preparing to unpack .../008-libxss1_1%3a1.2.3-1build3_amd64.deb ... 93s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 93s Selecting previously unselected package libtk8.6:amd64. 93s Preparing to unpack .../009-libtk8.6_8.6.15-1_amd64.deb ... 93s Unpacking libtk8.6:amd64 (8.6.15-1) ... 93s Selecting previously unselected package tk8.6-blt2.5. 93s Preparing to unpack .../010-tk8.6-blt2.5_2.5.3+dfsg-7build1_amd64.deb ... 93s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 93s Selecting previously unselected package blt. 93s Preparing to unpack .../011-blt_2.5.3+dfsg-7build1_amd64.deb ... 93s Unpacking blt (2.5.3+dfsg-7build1) ... 93s Selecting previously unselected package fontconfig. 93s Preparing to unpack .../012-fontconfig_2.15.0-1.1ubuntu2_amd64.deb ... 93s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 93s Selecting previously unselected package fonts-lyx. 93s Preparing to unpack .../013-fonts-lyx_2.4.2.1-1_all.deb ... 93s Unpacking fonts-lyx (2.4.2.1-1) ... 93s Selecting previously unselected package libaec0:amd64. 93s Preparing to unpack .../014-libaec0_1.1.3-1_amd64.deb ... 93s Unpacking libaec0:amd64 (1.1.3-1) ... 93s Selecting previously unselected package libavahi-common-data:amd64. 93s Preparing to unpack .../015-libavahi-common-data_0.8-13ubuntu6_amd64.deb ... 93s Unpacking libavahi-common-data:amd64 (0.8-13ubuntu6) ... 93s Selecting previously unselected package libavahi-common3:amd64. 93s Preparing to unpack .../016-libavahi-common3_0.8-13ubuntu6_amd64.deb ... 93s Unpacking libavahi-common3:amd64 (0.8-13ubuntu6) ... 93s Selecting previously unselected package libavahi-client3:amd64. 93s Preparing to unpack .../017-libavahi-client3_0.8-13ubuntu6_amd64.deb ... 93s Unpacking libavahi-client3:amd64 (0.8-13ubuntu6) ... 93s Selecting previously unselected package libblas3:amd64. 93s Preparing to unpack .../018-libblas3_3.12.0-3build2_amd64.deb ... 93s Unpacking libblas3:amd64 (3.12.0-3build2) ... 93s Selecting previously unselected package libcups2t64:amd64. 93s Preparing to unpack .../019-libcups2t64_2.4.10-1ubuntu2_amd64.deb ... 93s Unpacking libcups2t64:amd64 (2.4.10-1ubuntu2) ... 93s Selecting previously unselected package libdeflate0:amd64. 93s Preparing to unpack .../020-libdeflate0_1.22-1_amd64.deb ... 93s Unpacking libdeflate0:amd64 (1.22-1) ... 93s Selecting previously unselected package libdouble-conversion3:amd64. 93s Preparing to unpack .../021-libdouble-conversion3_3.3.0-1build1_amd64.deb ... 93s Unpacking libdouble-conversion3:amd64 (3.3.0-1build1) ... 93s Selecting previously unselected package libdrm-amdgpu1:amd64. 93s Preparing to unpack .../022-libdrm-amdgpu1_2.4.123-1_amd64.deb ... 93s Unpacking libdrm-amdgpu1:amd64 (2.4.123-1) ... 93s Selecting previously unselected package libpciaccess0:amd64. 93s Preparing to unpack .../023-libpciaccess0_0.17-3build1_amd64.deb ... 93s Unpacking libpciaccess0:amd64 (0.17-3build1) ... 93s Selecting previously unselected package libdrm-intel1:amd64. 93s Preparing to unpack .../024-libdrm-intel1_2.4.123-1_amd64.deb ... 93s Unpacking libdrm-intel1:amd64 (2.4.123-1) ... 93s Selecting previously unselected package libdrm-radeon1:amd64. 93s Preparing to unpack .../025-libdrm-radeon1_2.4.123-1_amd64.deb ... 93s Unpacking libdrm-radeon1:amd64 (2.4.123-1) ... 93s Selecting previously unselected package libwayland-server0:amd64. 93s Preparing to unpack .../026-libwayland-server0_1.23.0-1_amd64.deb ... 93s Unpacking libwayland-server0:amd64 (1.23.0-1) ... 93s Selecting previously unselected package libxcb-randr0:amd64. 93s Preparing to unpack .../027-libxcb-randr0_1.17.0-2_amd64.deb ... 93s Unpacking libxcb-randr0:amd64 (1.17.0-2) ... 93s Selecting previously unselected package libglapi-mesa:amd64. 93s Preparing to unpack .../028-libglapi-mesa_24.2.3-1ubuntu1_amd64.deb ... 93s Unpacking libglapi-mesa:amd64 (24.2.3-1ubuntu1) ... 93s Selecting previously unselected package libx11-xcb1:amd64. 93s Preparing to unpack .../029-libx11-xcb1_2%3a1.8.10-2_amd64.deb ... 93s Unpacking libx11-xcb1:amd64 (2:1.8.10-2) ... 93s Selecting previously unselected package libxcb-dri2-0:amd64. 93s Preparing to unpack .../030-libxcb-dri2-0_1.17.0-2_amd64.deb ... 93s Unpacking libxcb-dri2-0:amd64 (1.17.0-2) ... 93s Selecting previously unselected package libxcb-dri3-0:amd64. 93s Preparing to unpack .../031-libxcb-dri3-0_1.17.0-2_amd64.deb ... 93s Unpacking libxcb-dri3-0:amd64 (1.17.0-2) ... 93s Selecting previously unselected package libxcb-present0:amd64. 93s Preparing to unpack .../032-libxcb-present0_1.17.0-2_amd64.deb ... 93s Unpacking libxcb-present0:amd64 (1.17.0-2) ... 93s Selecting previously unselected package libxcb-sync1:amd64. 93s Preparing to unpack .../033-libxcb-sync1_1.17.0-2_amd64.deb ... 93s Unpacking libxcb-sync1:amd64 (1.17.0-2) ... 93s Selecting previously unselected package libxcb-xfixes0:amd64. 93s Preparing to unpack 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previously unselected package libjpeg-turbo8:amd64. 94s Preparing to unpack .../061-libjpeg-turbo8_2.1.5-2ubuntu2_amd64.deb ... 94s Unpacking libjpeg-turbo8:amd64 (2.1.5-2ubuntu2) ... 94s Selecting previously unselected package libjpeg8:amd64. 94s Preparing to unpack .../062-libjpeg8_8c-2ubuntu11_amd64.deb ... 94s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 94s Selecting previously unselected package libjs-jquery. 94s Preparing to unpack .../063-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 94s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 94s Selecting previously unselected package libjs-jquery-ui. 94s Preparing to unpack .../064-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 94s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 94s Selecting previously unselected package liblapack3:amd64. 94s Preparing to unpack .../065-liblapack3_3.12.0-3build2_amd64.deb ... 94s Unpacking liblapack3:amd64 (3.12.0-3build2) ... 94s Selecting previously unselected package liblbfgsb0:amd64. 94s Preparing to 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unselected package libglx0:amd64. 95s Preparing to unpack .../077-libglx0_1.7.0-1build1_amd64.deb ... 95s Unpacking libglx0:amd64 (1.7.0-1build1) ... 95s Selecting previously unselected package libgl1:amd64. 95s Preparing to unpack .../078-libgl1_1.7.0-1build1_amd64.deb ... 95s Unpacking libgl1:amd64 (1.7.0-1build1) ... 95s Selecting previously unselected package libqt5network5t64:amd64. 95s Preparing to unpack .../079-libqt5network5t64_5.15.15+dfsg-1ubuntu1_amd64.deb ... 95s Unpacking libqt5network5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 95s Selecting previously unselected package libsm6:amd64. 95s Preparing to unpack .../080-libsm6_2%3a1.2.4-1_amd64.deb ... 95s Unpacking libsm6:amd64 (2:1.2.4-1) ... 95s Selecting previously unselected package libxcb-icccm4:amd64. 95s Preparing to unpack .../081-libxcb-icccm4_0.4.2-1_amd64.deb ... 95s Unpacking libxcb-icccm4:amd64 (0.4.2-1) ... 95s Selecting previously unselected package libxcb-util1:amd64. 95s Preparing to unpack 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python3-scipy (1.13.1-5) ... 96s Selecting previously unselected package python3-ufolib2. 96s Preparing to unpack .../119-python3-ufolib2_0.16.1+dfsg1-1_all.deb ... 96s Unpacking python3-ufolib2 (0.16.1+dfsg1-1) ... 96s Selecting previously unselected package python3-mpmath. 96s Preparing to unpack .../120-python3-mpmath_1.3.0-1_all.deb ... 96s Unpacking python3-mpmath (1.3.0-1) ... 96s Selecting previously unselected package python3-sympy. 96s Preparing to unpack .../121-python3-sympy_1.13.3-1_all.deb ... 96s Unpacking python3-sympy (1.13.3-1) ... 97s Selecting previously unselected package python3-tz. 97s Preparing to unpack .../122-python3-tz_2024.1-2_all.deb ... 97s Unpacking python3-tz (2024.1-2) ... 97s Selecting previously unselected package python3-fs. 97s Preparing to unpack .../123-python3-fs_2.4.16-4_all.deb ... 97s Unpacking python3-fs (2.4.16-4) ... 97s Selecting previously unselected package python3-lxml:amd64. 97s Preparing to unpack .../124-python3-lxml_5.3.0-1_amd64.deb ... 97s Unpacking python3-lxml:amd64 (5.3.0-1) ... 97s Selecting previously unselected package python3-lz4. 97s Preparing to unpack .../125-python3-lz4_4.0.2+dfsg-1build4_amd64.deb ... 97s Unpacking python3-lz4 (4.0.2+dfsg-1build4) ... 97s Selecting previously unselected package unicode-data. 97s Preparing to unpack .../126-unicode-data_15.1.0-1_all.deb ... 97s Unpacking unicode-data (15.1.0-1) ... 97s Selecting previously unselected package python3-fonttools. 97s Preparing to unpack .../127-python3-fonttools_4.46.0-1build2_amd64.deb ... 97s Unpacking python3-fonttools (4.46.0-1build2) ... 97s Selecting previously unselected package python3-h5py-serial. 97s Preparing to unpack .../128-python3-h5py-serial_3.11.0-5ubuntu1_amd64.deb ... 97s Unpacking python3-h5py-serial (3.11.0-5ubuntu1) ... 97s Selecting previously unselected package python3-h5py. 97s Preparing to unpack .../129-python3-h5py_3.11.0-5ubuntu1_all.deb ... 97s Unpacking python3-h5py (3.11.0-5ubuntu1) ... 97s Selecting previously unselected package python3-kiwisolver. 97s Preparing to unpack .../130-python3-kiwisolver_1.4.7-2build1_amd64.deb ... 97s Unpacking python3-kiwisolver (1.4.7-2build1) ... 97s Selecting previously unselected package libopenjp2-7:amd64. 97s Preparing to unpack .../131-libopenjp2-7_2.5.0-2ubuntu1_amd64.deb ... 97s Unpacking libopenjp2-7:amd64 (2.5.0-2ubuntu1) ... 97s Selecting previously unselected package python3-pil:amd64. 97s Preparing to unpack .../132-python3-pil_10.4.0-1ubuntu1_amd64.deb ... 97s Unpacking python3-pil:amd64 (10.4.0-1ubuntu1) ... 97s Selecting previously unselected package python3.12-tk. 97s Preparing to unpack .../133-python3.12-tk_3.12.7-3_amd64.deb ... 97s Unpacking python3.12-tk (3.12.7-3) ... 97s Selecting previously unselected package python3-tk:amd64. 97s Preparing to unpack .../134-python3-tk_3.12.6-1ubuntu1_amd64.deb ... 97s Unpacking python3-tk:amd64 (3.12.6-1ubuntu1) ... 97s Selecting previously unselected package python3-pil.imagetk:amd64. 97s Preparing to unpack .../135-python3-pil.imagetk_10.4.0-1ubuntu1_amd64.deb ... 97s Unpacking python3-pil.imagetk:amd64 (10.4.0-1ubuntu1) ... 97s Selecting previously unselected package python3-packaging. 97s Preparing to unpack .../136-python3-packaging_24.1-1_all.deb ... 97s Unpacking python3-packaging (24.1-1) ... 97s Selecting previously unselected package python3-matplotlib. 97s Preparing to unpack .../137-python3-matplotlib_3.8.3-3ubuntu1_amd64.deb ... 97s Unpacking python3-matplotlib (3.8.3-3ubuntu1) ... 97s Selecting previously unselected package python3-pyqt5.sip. 97s Preparing to unpack .../138-python3-pyqt5.sip_12.15.0-1build1_amd64.deb ... 97s Unpacking python3-pyqt5.sip (12.15.0-1build1) ... 97s Selecting previously unselected package python3-pyqt5. 97s Preparing to unpack .../139-python3-pyqt5_5.15.11+dfsg-1build1_amd64.deb ... 97s Unpacking python3-pyqt5 (5.15.11+dfsg-1build1) ... 98s Selecting previously unselected package python3-fabio. 98s Preparing to unpack .../140-python3-fabio_2024.4.0-2_amd64.deb ... 98s Unpacking python3-fabio (2024.4.0-2) ... 98s Selecting previously unselected package autopkgtest-satdep. 98s Preparing to unpack .../141-1-autopkgtest-satdep.deb ... 98s Unpacking autopkgtest-satdep (0) ... 98s Setting up libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 98s Setting up libxcb-dri3-0:amd64 (1.17.0-2) ... 98s Setting up liblcms2-2:amd64 (2.16-2) ... 98s Setting up libsharpyuv0:amd64 (1.4.0-0.1) ... 98s Setting up libwayland-server0:amd64 (1.23.0-1) ... 98s Setting up libx11-xcb1:amd64 (2:1.8.10-2) ... 98s Setting up libpciaccess0:amd64 (0.17-3build1) ... 98s Setting up libdouble-conversion3:amd64 (3.3.0-1build1) ... 98s Setting up libxcb-xfixes0:amd64 (1.17.0-2) ... 98s Setting up liblerc4:amd64 (4.0.0+ds-4ubuntu2) ... 98s Setting up libxcb-xinput0:amd64 (1.17.0-2) ... 98s Setting up libxrender1:amd64 (1:0.9.10-1.1build1) ... 98s Setting up python3-lz4 (4.0.2+dfsg-1build4) ... 98s Setting up libxcb-render0:amd64 (1.17.0-2) ... 98s Setting up libdrm-radeon1:amd64 (2.4.123-1) ... 98s Setting up libglvnd0:amd64 (1.7.0-1build1) ... 98s Setting up fonts-lyx (2.4.2.1-1) ... 98s Setting up libxcb-glx0:amd64 (1.17.0-2) ... 98s Setting up libdrm-intel1:amd64 (2.4.123-1) ... 98s Setting up libxcb-keysyms1:amd64 (0.4.0-1build4) ... 98s Setting up libxcb-shape0:amd64 (1.17.0-2) ... 98s Setting up x11-common (1:7.7+23ubuntu3) ... 98s Setting up libdeflate0:amd64 (1.22-1) ... 98s Setting up libqhull-r8.0:amd64 (2020.2-6build1) ... 98s Setting up libxcb-render-util0:amd64 (0.3.9-1build4) ... 98s Setting up python3-all (3.12.6-0ubuntu1) ... 98s Setting up libxcb-shm0:amd64 (1.17.0-2) ... 98s Setting up libxcb-icccm4:amd64 (0.4.2-1) ... 98s Setting up libgomp1:amd64 (14.2.0-8ubuntu1) ... 98s Setting up libjbig0:amd64 (2.1-6.1ubuntu2) ... 98s Setting up libpcre2-16-0:amd64 (10.42-4ubuntu3) ... 98s Setting up libaec0:amd64 (1.1.3-1) ... 98s Setting up python3-tz (2024.1-2) ... 98s Setting up libxcb-util1:amd64 (0.4.0-1build3) ... 98s Setting up libxxf86vm1:amd64 (1:1.1.4-1build4) ... 98s Setting up libxcb-xkb1:amd64 (1.17.0-2) ... 98s Setting up libxcb-image0:amd64 (0.4.0-2build1) ... 98s Setting up libxcb-present0:amd64 (1.17.0-2) ... 98s Setting up unicode-data (15.1.0-1) ... 98s Setting up python3-six (1.16.0-7) ... 98s Setting up libqt5core5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 98s Setting up python3-decorator (5.1.1-5) ... 98s Setting up libblas3:amd64 (3.12.0-3build2) ... 98s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 98s Setting up python3-packaging (24.1-1) ... 98s Setting up libxcb-xinerama0:amd64 (1.17.0-2) ... 98s Setting up libxfixes3:amd64 (1:6.0.0-2build1) ... 98s Setting up libxcb-sync1:amd64 (1.17.0-2) ... 98s Setting up python3-brotli (1.1.0-2build2) ... 99s Setting up libavahi-common-data:amd64 (0.8-13ubuntu6) ... 99s Setting up liblzf1:amd64 (3.6-4) ... 99s Setting up python3-cycler (0.12.1-1) ... 99s Setting up libimagequant0:amd64 (2.18.0-1build1) ... 99s Setting up libxkbcommon-x11-0:amd64 (1.6.0-1build1) ... 99s Setting up fonts-dejavu-mono (2.37-8) ... 99s Setting up python3-kiwisolver (1.4.7-2build1) ... 99s Setting up libtcl8.6:amd64 (8.6.15+dfsg-2) ... 99s Setting up fonts-dejavu-core (2.37-8) ... 99s Setting up libjpeg-turbo8:amd64 (2.1.5-2ubuntu2) ... 99s Setting up libglapi-mesa:amd64 (24.2.3-1ubuntu1) ... 99s Setting up libgfortran5:amd64 (14.2.0-8ubuntu1) ... 99s Setting up libvulkan1:amd64 (1.3.296.0-1) ... 99s Setting up libwebp7:amd64 (1.4.0-0.1) ... 99s Setting up libxcb-dri2-0:amd64 (1.17.0-2) ... 99s Setting up python3-pyqt5.sip (12.15.0-1build1) ... 99s Setting up libmtdev1t64:amd64 (1.1.6-1.2) ... 99s Setting up libxshmfence1:amd64 (1.3-1build5) ... 99s Setting up libxcb-randr0:amd64 (1.17.0-2) ... 99s Setting up libxslt1.1:amd64 (1.1.39-0exp1ubuntu1) ... 99s Setting up libqt5sql5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 99s Setting up libmd4c0:amd64 (0.5.2-2) ... 99s Setting up libopenjp2-7:amd64 (2.5.0-2ubuntu1) ... 99s Setting up libharfbuzz0b:amd64 (10.0.1-1) ... 99s Setting up python3-dateutil (2.9.0-2) ... 99s Setting up libxss1:amd64 (1:1.2.3-1build3) ... 99s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 99s Setting up python3-mpmath (1.3.0-1) ... 99s Setting up python-matplotlib-data (3.8.3-3ubuntu1) ... 99s Setting up libwebpmux3:amd64 (1.4.0-0.1) ... 99s Setting up python3-appdirs (1.4.4-4) ... 99s Setting up libsz2:amd64 (1.1.3-1) ... 99s Setting up libdrm-amdgpu1:amd64 (2.4.123-1) ... 99s Setting up libwacom-common (2.13.0-1) ... 99s Setting up libwayland-client0:amd64 (1.23.0-1) ... 99s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 99s Setting up python3-sympy (1.13.3-1) ... 104s Setting up libice6:amd64 (2:1.1.1-1) ... 104s Setting up mesa-libgallium:amd64 (24.2.3-1ubuntu1) ... 104s Setting up liblapack3:amd64 (3.12.0-3build2) ... 104s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 104s Setting up libqt5dbus5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 104s Setting up libgbm1:amd64 (24.2.3-1ubuntu1) ... 104s Setting up libwacom9:amd64 (2.13.0-1) ... 104s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 104s Setting up libwebpdemux2:amd64 (1.4.0-0.1) ... 104s Setting up libgl1-mesa-dri:amd64 (24.2.3-1ubuntu1) ... 104s Setting up libqt5network5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 104s Setting up libavahi-common3:amd64 (0.8-13ubuntu6) ... 104s Setting up libqt5xml5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 104s Setting up libqt5test5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 104s Setting up libinput-bin (1.26.2-1) ... 104s Setting up python3-fs (2.4.16-4) ... 104s Setting up libegl-mesa0:amd64 (24.2.3-1ubuntu1) ... 104s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 104s Setting up libraqm0:amd64 (0.10.1-1build1) ... 104s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 106s Setting up python3-lxml:amd64 (5.3.0-1) ... 106s Setting up libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 106s Setting up libegl1:amd64 (1.7.0-1build1) ... 106s Setting up python3-contourpy (1.3.0-2) ... 106s Setting up libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ... 106s Setting up libhdf5-103-1t64:amd64 (1.10.10+repack-4ubuntu3) ... 106s Setting up libsm6:amd64 (2:1.2.4-1) ... 106s Setting up libavahi-client3:amd64 (0.8-13ubuntu6) ... 106s Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1build1) ... 106s Setting up libinput10:amd64 (1.26.2-1) ... 106s Setting up libhdf5-hl-100t64:amd64 (1.10.10+repack-4ubuntu3) ... 106s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 108s Regenerating fonts cache... done. 108s Setting up libxft2:amd64 (2.3.6-1build1) ... 108s Setting up libglx-mesa0:amd64 (24.2.3-1ubuntu1) ... 108s Setting up python3-scipy (1.13.1-5) ... 111s Setting up libglx0:amd64 (1.7.0-1build1) ... 111s Setting up libtk8.6:amd64 (8.6.15-1) ... 111s Setting up python3.12-tk (3.12.7-3) ... 111s Setting up python3-h5py-serial (3.11.0-5ubuntu1) ... 111s Setting up python3-pil:amd64 (10.4.0-1ubuntu1) ... 111s Setting up libgl1:amd64 (1.7.0-1build1) ... 111s Setting up python3-h5py (3.11.0-5ubuntu1) ... 111s Setting up libcups2t64:amd64 (2.4.10-1ubuntu2) ... 111s Setting up tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 111s Setting up blt (2.5.3+dfsg-7build1) ... 111s Setting up python3-tk:amd64 (3.12.6-1ubuntu1) ... 111s Setting up libqt5gui5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 111s Setting up python3-pil.imagetk:amd64 (10.4.0-1ubuntu1) ... 111s Setting up libqt5widgets5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 111s Setting up libqt5help5:amd64 (5.15.15-2) ... 111s Setting up libqt5printsupport5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 111s Setting up libqt5designer5:amd64 (5.15.15-2) ... 111s Setting up python3-pyqt5 (5.15.11+dfsg-1build1) ... 112s Setting up python3-fonttools (4.46.0-1build2) ... 112s Setting up python3-ufolib2 (0.16.1+dfsg1-1) ... 112s Setting up python3-matplotlib (3.8.3-3ubuntu1) ... 114s Setting up python3-fabio (2024.4.0-2) ... 114s Setting up autopkgtest-satdep (0) ... 114s Processing triggers for libc-bin (2.40-1ubuntu3) ... 114s Processing triggers for man-db (2.13.0-1) ... 115s Processing triggers for udev (256.5-2ubuntu4) ... 119s (Reading database ... 84202 files and directories currently installed.) 119s Removing autopkgtest-satdep (0) ... 120s autopkgtest [09:24:13]: test command1: set -efu ; cp bootstrap.py pyproject.toml run_tests.py README.rst "$AUTOPKGTEST_TMP" ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py run_tests.py -v -m --installed ; done 120s autopkgtest [09:24:13]: test command1: [----------------------- 120s Testing with python3.12: 120s WARNING:run_tests:Test fabio 2024.4.0 from /usr/lib/python3/dist-packages/fabio 120s test_iter_abort_iteration (fabio.test.test_fabio_image.TestFabioImage.test_iter_abort_iteration) ... ok 120s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestFabioImage.test_iter_abort_iteration 120s testcopy (fabio.test.test_fabio_image.Test50000.testcopy) 120s test the copy statement ... ok 120s INFO:memProf:Time: 0.006s RAM: 6.144 Mb fabio.test.test_fabio_image.Test50000.testcopy 120s testgetmax (fabio.test.test_fabio_image.Test50000.testgetmax) 120s check max ... ok 120s INFO:memProf:Time: 0.003s RAM: 0.700 Mb fabio.test.test_fabio_image.Test50000.testgetmax 120s testgetmean (fabio.test.test_fabio_image.Test50000.testgetmean) 120s check mean ... ok 120s INFO:memProf:Time: 0.004s RAM: 0.252 Mb fabio.test.test_fabio_image.Test50000.testgetmean 120s testgetmin (fabio.test.test_fabio_image.Test50000.testgetmin) 120s check min ... ok 120s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_fabio_image.Test50000.testgetmin 120s testgetstddev (fabio.test.test_fabio_image.Test50000.testgetstddev) 120s check stddev ... ok 120s INFO:memProf:Time: 0.006s RAM: 8.196 Mb fabio.test.test_fabio_image.Test50000.testgetstddev 120s testRebin (fabio.test.test_fabio_image.TestSlices.testRebin) 120s Test the rebin method ... ok 120s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testRebin 120s testgetmax (fabio.test.test_fabio_image.TestSlices.testgetmax) 120s check max ... ok 120s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testgetmax 120s testgetmin (fabio.test.test_fabio_image.TestSlices.testgetmin) 120s check min ... ok 120s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testgetmin 120s testintegratearea (fabio.test.test_fabio_image.TestSlices.testintegratearea) 120s check integrations ... ok 120s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testintegratearea 120s testFlat (fabio.test.test_fabio_image.TestOpen.testFlat) 120s no compression ... ok 120s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.testFlat 120s test_badtype (fabio.test.test_fabio_image.TestOpen.test_badtype) ... ok 120s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.test_badtype 120s test_pathlib (fabio.test.test_fabio_image.TestOpen.test_pathlib) ... ok 120s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.test_pathlib 120s testbz2 (fabio.test.test_fabio_image.TestOpen.testbz2) 120s bzipped ... ok 120s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.testbz2 120s testgz (fabio.test.test_fabio_image.TestOpen.testgz) 120s gzipped ... ok 120s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.testgz 120s testpil (fabio.test.test_fabio_image.TestPilImage.testpil) ... WARNING:fabio.DEPRECATION:Function toPIL16 is deprecated since fabio version 0.9. Reason: Not maintained. Use 'fabio.utils.pilutils.create_pil_16' instead. 120s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 209, in testpil 120s pim = img.toPIL16() 120s ok 120s INFO:memProf:Time: 0.032s RAM: 0.000 Mb fabio.test.test_fabio_image.TestPilImage.testpil 120s testpil (fabio.test.test_fabio_image.TestPilImage2.testpil) ... WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py:232: RuntimeWarning: invalid value encountered in cast 120s return (numpy.random.random(shape) * sys.maxsize / 10).astype(typ) 120s 120s ok 120s INFO:memProf:Time: 0.032s RAM: 0.000 Mb fabio.test.test_fabio_image.TestPilImage2.testpil 120s testpil (fabio.test.test_fabio_image.TestPilImage3.testpil) ... WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py:240: RuntimeWarning: invalid value encountered in cast 120s return ((numpy.random.random(shape) - 0.5) * sys.maxsize / 10).astype(typ) 120s 121s ok 121s INFO:memProf:Time: 0.032s RAM: 0.000 Mb fabio.test.test_fabio_image.TestPilImage3.testpil 121s test_cleanup_pilimage_cache (fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_cleanup_pilimage_cache) ... WARNING:fabio.DEPRECATION:Function pilimage is deprecated. Reason: Setting pilimage not supported. This attrbute is not cached anymore. 121s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 257, in test_cleanup_pilimage_cache 121s image.pilimage = None 121s ok 121s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_cleanup_pilimage_cache 121s test_patch_dim (fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_patch_dim) ... WARNING:fabio.DEPRECATION:Function dim2 is deprecated. Reason: dim2 should not be updated. 121s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 249, in test_patch_dim 121s image.dim2, image.dim1 = data.shape 121s WARNING:fabio.DEPRECATION:Function dim1 is deprecated. Reason: dim1 should not be updated. 121s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 249, in test_patch_dim 121s image.dim2, image.dim1 = data.shape 121s ok 121s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_patch_dim 121s test_many_cases (fabio.test.test_filenames.TestFilenames.test_many_cases) 121s loop over CASES ... ok 121s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenames.test_many_cases 121s test_more_cases (fabio.test.test_filenames.TestFilenames.test_more_cases) ... ok 121s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenames.test_more_cases 121s test_more_cases_jump (fabio.test.test_filenames.TestFilenames.test_more_cases_jump) ... ok 121s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenames.test_more_cases_jump 121s test_FileNameObject_can_iterate (fabio.test.test_filenames.TestFilenameObjects.test_FileNameObject_can_iterate) 121s Regression test for Fable ... ok 121s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenameObjects.test_FileNameObject_can_iterate 121s test_files_are_being_opened (fabio.test.test_filenames.TestFilenameObjects.test_files_are_being_opened) 121s Regression test for Fable ... ok 121s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenameObjects.test_files_are_being_opened 121s testfirst (fabio.test.test_file_series.TestRandomSeries.testfirst) 121s check first ... ok 121s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestRandomSeries.testfirst 121s testjump (fabio.test.test_file_series.TestRandomSeries.testjump) 121s check jump ... ok 121s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestRandomSeries.testjump 121s testlast (fabio.test.test_file_series.TestRandomSeries.testlast) 121s check first ... ok 121s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestRandomSeries.testlast 121s testfirst (fabio.test.test_file_series.TestEdfNumbered.testfirst) 121s first in series ... ok 121s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testfirst 121s testlast (fabio.test.test_file_series.TestEdfNumbered.testlast) 121s last in series ... ok 121s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testlast 121s testlen (fabio.test.test_file_series.TestEdfNumbered.testlen) 121s check len ... ok 121s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testlen 121s testnext (fabio.test.test_file_series.TestEdfNumbered.testnext) 121s check all in order ... ok 121s INFO:memProf:Time: 0.011s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testnext 121s testnextjump (fabio.test.test_file_series.TestEdfNumbered.testnextjump) 121s check current ... ok 121s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testnextjump 121s testprevious (fabio.test.test_file_series.TestEdfNumbered.testprevious) 121s check all in order ... ok 121s INFO:memProf:Time: 0.010s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testprevious 121s testprevjump (fabio.test.test_file_series.TestEdfNumbered.testprevjump) 121s check current ... ok 121s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testprevjump 121s test_anyframe_frames (fabio.test.test_file_series.TestFileSeries.test_anyframe_frames) ... ok 121s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_frames 121s test_anyframe_getframe (fabio.test.test_file_series.TestFileSeries.test_anyframe_getframe) ... ok 121s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_getframe 121s test_anyframe_getframes (fabio.test.test_file_series.TestFileSeries.test_anyframe_getframes) ... ok 121s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_getframes 121s test_anyframe_nframes (fabio.test.test_file_series.TestFileSeries.test_anyframe_nframes) ... ok 121s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_nframes 121s test_anyframe_nofiles (fabio.test.test_file_series.TestFileSeries.test_anyframe_nofiles) ... ok 121s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_nofiles 121s test_filename_generator (fabio.test.test_file_series.TestFileSeries.test_filename_generator) ... ok 121s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_filename_generator 121s test_filename_iterator (fabio.test.test_file_series.TestFileSeries.test_filename_iterator) ... ok 121s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_filename_iterator 121s test_multiframe_frames (fabio.test.test_file_series.TestFileSeries.test_multiframe_frames) ... ok 121s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_frames 121s test_multiframe_getframe (fabio.test.test_file_series.TestFileSeries.test_multiframe_getframe) ... ok 121s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_getframe 121s test_multiframe_nframes (fabio.test.test_file_series.TestFileSeries.test_multiframe_nframes) ... ok 121s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_nframes 121s test_multiframe_nofiles (fabio.test.test_file_series.TestFileSeries.test_multiframe_nofiles) ... ok 121s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_nofiles 121s test_singleframe_frames (fabio.test.test_file_series.TestFileSeries.test_singleframe_frames) ... ok 121s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_frames 121s test_singleframe_getframe (fabio.test.test_file_series.TestFileSeries.test_singleframe_getframe) ... ok 121s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_getframe 121s test_singleframe_nframes (fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes) ... ok 121s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes 121s test_singleframe_nframes2 (fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes2) ... ok 121s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes2 121s test_singleframe_nframes3 (fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes3) ... ok 121s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes3 121s test_singleframe_nofiles (fabio.test.test_file_series.TestFileSeries.test_singleframe_nofiles) ... ok 121s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nofiles 121s test_with_filename_series (fabio.test.test_file_series.TestFileSeries.test_with_filename_series) ... ok 121s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_with_filename_series 121s test_with_numbered_file_series (fabio.test.test_file_series.TestFileSeries.test_with_numbered_file_series) ... ok 121s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_with_numbered_file_series 121s test_next1 (fabio.test.test_filename_steps.TestNext.test_next1) ... ok 121s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filename_steps.TestNext.test_next1 121s test_prev1 (fabio.test.test_filename_steps.TestPrev.test_prev1) ... ok 121s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filename_steps.TestPrev.test_prev1 121s test_jump1 (fabio.test.test_filename_steps.TestJump.test_jump1) ... ok 121s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filename_steps.TestJump.test_jump1 121s testheader (fabio.test.test_header_not_singleton.TestHeaderNotSingleton.testheader) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 121s INFO:fabio.utils.ExternalResources:Image mb_LP_1_001.img.bz2 successfully downloaded. 124s ok 124s INFO:memProf:Time: 3.716s RAM: 49.956 Mb fabio.test.test_header_not_singleton.TestHeaderNotSingleton.testheader 124s testcase (fabio.test.test_open_header.Test1.testcase) 124s check openheader can read edf headers ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675_header_only.edf.bz2') 124s INFO:fabio.utils.ExternalResources:Image F2K_Seb_Lyso0675_header_only.edf.bz2 successfully downloaded. 124s ok 124s INFO:memProf:Time: 0.142s RAM: 0.000 Mb fabio.test.test_open_header.Test1.testcase 124s testAdsc (fabio.test.test_open_image.TestOpenDtrek.testAdsc) 124s openimage opening adsc ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 125s ok 125s INFO:memProf:Time: 0.081s RAM: 147.596 Mb fabio.test.test_open_image.TestOpenDtrek.testAdsc 125s testAdscBz2 (fabio.test.test_open_image.TestOpenDtrek.testAdscBz2) 125s openimage opening adsc bzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 126s ok 126s INFO:memProf:Time: 1.269s RAM: 1.636 Mb fabio.test.test_open_image.TestOpenDtrek.testAdscBz2 126s testAdscGz (fabio.test.test_open_image.TestOpenDtrek.testAdscGz) 126s openimage opening adsc gzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.gz') 126s ok 126s INFO:memProf:Time: 0.249s RAM: 13.108 Mb fabio.test.test_open_image.TestOpenDtrek.testAdscGz 126s testBruker (fabio.test.test_open_image.TestOpenBruker.testBruker) 126s openimage opening bruker ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 126s INFO:fabio.utils.ExternalResources:Image Cr8F8140k103.0026.bz2 successfully downloaded. 127s ok 127s INFO:memProf:Time: 0.485s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenBruker.testBruker 127s testBrukerBz2 (fabio.test.test_open_image.TestOpenBruker.testBrukerBz2) 127s openimage opening bruker bzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 127s ok 127s INFO:memProf:Time: 0.050s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenBruker.testBrukerBz2 127s testBrukerGz (fabio.test.test_open_image.TestOpenBruker.testBrukerGz) 127s openimage opening bruker gzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.gz') 127s ok 127s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenBruker.testBrukerGz 127s testEdf (fabio.test.test_open_image.TestOpenEdf.testEdf) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 127s INFO:fabio.utils.ExternalResources:Image F2K_Seb_Lyso0675.edf.bz2 successfully downloaded. 128s ok 128s INFO:memProf:Time: 1.716s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenEdf.testEdf 128s testEdfBz2 (fabio.test.test_open_image.TestOpenEdf.testEdfBz2) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 130s ok 130s INFO:memProf:Time: 1.334s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenEdf.testEdfBz2 130s testEdfGz (fabio.test.test_open_image.TestOpenEdf.testEdfGz) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.gz') 130s ok 130s INFO:memProf:Time: 0.195s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenEdf.testEdfGz 130s testMask (fabio.test.test_open_image.TestOpenMask.testMask) 130s openimage opening fit2d msk ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 130s INFO:fabio.utils.ExternalResources:Image face.msk.bz2 successfully downloaded. 130s ok 130s INFO:memProf:Time: 0.147s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMask.testMask 130s testMaskBz2 (fabio.test.test_open_image.TestOpenMask.testMaskBz2) 130s openimage opening fit2d msk bzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 130s ok 130s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMask.testMaskBz2 130s testMaskGz (fabio.test.test_open_image.TestOpenMask.testMaskGz) 130s openimage opening fit2d msk gzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.gz') 130s ok 130s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMask.testMaskGz 130s testMccd (fabio.test.test_open_image.TestOpenMccd.testMccd) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.bz2') 131s INFO:fabio.utils.ExternalResources:Image somedata_0001.mccd.bz2 successfully downloaded. 131s ok 131s INFO:memProf:Time: 0.812s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMccd.testMccd 131s testMccdBz2 (fabio.test.test_open_image.TestOpenMccd.testMccdBz2) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.bz2') 131s ok 131s INFO:memProf:Time: 0.133s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMccd.testMccdBz2 131s testMccdGz (fabio.test.test_open_image.TestOpenMccd.testMccdGz) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.gz') 131s ok 131s INFO:memProf:Time: 0.020s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMccd.testMccdGz 131s testOxd (fabio.test.test_open_image.TestOpenOxd.testOxd) 131s openimage opening adsc ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 131s INFO:fabio.utils.ExternalResources:Image b191_1_9_1.img.bz2 successfully downloaded. 131s ok 131s INFO:memProf:Time: 0.454s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenOxd.testOxd 131s testOxdUnc (fabio.test.test_open_image.TestOpenOxd.testOxdUnc) 131s openimage opening adsc ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 132s INFO:fabio.utils.ExternalResources:Image b191_1_9_1_uncompressed.img.bz2 successfully downloaded. 133s ok 133s INFO:memProf:Time: 1.435s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenOxd.testOxdUnc 133s testComp (fabio.test.test_compression.TestByteOffset.testComp) ... ok 133s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_compression.TestByteOffset.testComp 133s testSC (fabio.test.test_compression.TestByteOffset.testSC) 133s test that datasets are unchanged after various compression/decompressions ... ok 133s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_compression.TestByteOffset.testSC 133s test_from_time (fabio.test.test_nexus.TestNexus.test_from_time) ... ok 133s INFO:memProf:Time: 0.010s RAM: 0.000 Mb fabio.test.test_nexus.TestNexus.test_from_time 133s test_nexus (fabio.test.test_nexus.TestNexus.test_nexus) 133s Test creation of Nexus files ... ok 133s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.test_nexus.TestNexus.test_nexus 133s testDefaultOption (fabio.test.test_fabio_convert.TestFabioConvert.testDefaultOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -F=msk -o=output 133s INFO:fabio.test.test_fabio_convert:Return code: 0 133s ok 133s INFO:memProf:Time: 0.220s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testDefaultOption 133s testForceOption (fabio.test.test_fabio_convert.TestFabioConvert.testForceOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -f -F=msk -o=output 133s INFO:fabio.test.test_fabio_convert:Return code: 0 133s ok 133s INFO:memProf:Time: 0.199s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testForceOption 133s testFullFormatName (fabio.test.test_fabio_convert.TestFabioConvert.testFullFormatName) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.* -F=numpyimage -o=output 133s INFO:fabio.test.test_fabio_convert:Return code: 0 133s ok 133s INFO:memProf:Time: 0.197s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testFullFormatName 133s testInteractiveOption (fabio.test.test_fabio_convert.TestFabioConvert.testInteractiveOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -n -i -F=msk -o=output 134s INFO:fabio.test.test_fabio_convert:Return code: 0 134s ok 134s INFO:memProf:Time: 0.194s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testInteractiveOption 134s testNoClobberOption (fabio.test.test_fabio_convert.TestFabioConvert.testNoClobberOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -n -F=msk -o=output 134s INFO:fabio.test.test_fabio_convert:Return code: 0 134s ok 134s INFO:memProf:Time: 0.194s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testNoClobberOption 134s testRemoveDestinationOption (fabio.test.test_fabio_convert.TestFabioConvert.testRemoveDestinationOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf --remove-destination -F=msk -o=output 134s INFO:fabio.test.test_fabio_convert:Return code: 0 134s ok 134s INFO:memProf:Time: 0.193s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testRemoveDestinationOption 134s testSingleFile (fabio.test.test_fabio_convert.TestFabioConvert.testSingleFile) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.edf -o=output/03.msk 134s INFO:fabio.test.test_fabio_convert:Return code: 0 134s ok 134s INFO:memProf:Time: 0.198s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testSingleFile 134s testSingleFileToDir (fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileToDir) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.edf -F=msk -o=output 134s INFO:fabio.test.test_fabio_convert:Return code: 0 134s ok 134s INFO:memProf:Time: 0.191s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileToDir 134s testSingleFileWithWildcardToDir (fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileWithWildcardToDir) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.* -F=msk -o=output 135s INFO:fabio.test.test_fabio_convert:Return code: 0 135s ok 135s INFO:memProf:Time: 0.187s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileWithWildcardToDir 135s testUpdateOption (fabio.test.test_fabio_convert.TestFabioConvert.testUpdateOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf --update -F=msk -o=output 135s INFO:fabio.test.test_fabio_convert:Return code: 0 135s ok 135s INFO:memProf:Time: 0.198s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testUpdateOption 135s test_missing_file (fabio.test.test_failing_files.TestFailingFiles.test_missing_file) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_missing_file 135s test_wrong_dm3 (fabio.test.test_failing_files.TestFailingFiles.test_wrong_dm3) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_dm3 135s test_wrong_edf (fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf 135s test_wrong_edf2 (fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf2) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf2 135s test_wrong_format (fabio.test.test_failing_files.TestFailingFiles.test_wrong_format) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_format 135s test_wrong_msk (fabio.test.test_failing_files.TestFailingFiles.test_wrong_msk) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_msk 135s test_wrong_numpy (fabio.test.test_failing_files.TestFailingFiles.test_wrong_numpy) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_numpy 135s test_annotation (fabio.test.test_formats.TestRegistration.test_annotation) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_annotation 135s test_deprecated_fabioimage_factory (fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory) 135s Check that it is still working ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory 135s test_deprecated_fabioimage_factory_missing_format (fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory_missing_format) 135s Check that it is still working ... ok 135s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory_missing_format 135s test_fabio_factory (fabio.test.test_formats.TestRegistration.test_fabio_factory) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabio_factory 135s test_fabio_factory_missing_format (fabio.test.test_formats.TestRegistration.test_fabio_factory_missing_format) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabio_factory_missing_format 135s test_fabioformats_factory (fabio.test.test_formats.TestRegistration.test_fabioformats_factory) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabioformats_factory 135s test_fabioformats_factory_missing_format (fabio.test.test_formats.TestRegistration.test_fabioformats_factory_missing_format) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabioformats_factory_missing_format 135s test_function (fabio.test.test_formats.TestRegistration.test_function) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_function 135s test_not_existing (fabio.test.test_formats.TestRegistration.test_not_existing) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_not_existing 135s test_edf_to_tiff (fabio.test.test_image_convert.TestImageConvert.test_edf_to_tiff) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.edf') 135s INFO:fabio.utils.ExternalResources:Image face.edf.bz2 successfully downloaded. 135s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/face.edf (frame 0) misses mandatory keys: SIZE 135s ok 135s INFO:memProf:Time: 0.151s RAM: 0.000 Mb fabio.test.test_image_convert.TestImageConvert.test_edf_to_tiff 135s test_append (fabio.test.test_tiffio.TestTiffIO.test_append) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_tiffio.TestTiffIO.test_append 135s test_read (fabio.test.test_tiffio.TestTiffIO.test_read) ... INFO:fabio.test.test_tiffio:nRows = 100 135s INFO:fabio.test.test_tiffio:nColumns = 100 135s INFO:fabio.test.test_tiffio:nBits = 16 135s INFO:fabio.test.test_tiffio:compression = False 135s INFO:fabio.test.test_tiffio:compression_type = 1 135s INFO:fabio.test.test_tiffio:imageDescription = Title=1st 135s 135s INFO:fabio.test.test_tiffio:stripOffsets = [168] 135s INFO:fabio.test.test_tiffio:rowsPerStrip = 100 135s INFO:fabio.test.test_tiffio:stripByteCounts = [20000] 135s INFO:fabio.test.test_tiffio:software = PyMca.TiffIO 135s INFO:fabio.test.test_tiffio:date = Unknown Date 135s INFO:fabio.test.test_tiffio:sampleFormat = 1 135s INFO:fabio.test.test_tiffio:photometricInterpretation = 1 135s INFO:fabio.test.test_tiffio:info = {'Title': '1st'} 135s INFO:fabio.test.test_tiffio:data [0, 0:10] = [0 1 2 3 4 5 6 7 8 9] 135s ok 135s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_tiffio.TestTiffIO.test_read 135s test_write (fabio.test.test_tiffio.TestTiffIO.test_write) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_tiffio.TestTiffIO.test_write 135s test_single_frame_iterator (fabio.test.test_frames.TestFabioImage.test_single_frame_iterator) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestFabioImage.test_single_frame_iterator 135s test_content (fabio.test.test_frames.TestVirtualEdf.test_content) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_content 135s test_frames_abort_iteration (fabio.test.test_frames.TestVirtualEdf.test_frames_abort_iteration) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_frames_abort_iteration 135s test_frames_full_iteration (fabio.test.test_frames.TestVirtualEdf.test_frames_full_iteration) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_frames_full_iteration 135s test_frames_random_access (fabio.test.test_frames.TestVirtualEdf.test_frames_random_access) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_frames_random_access 135s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 135s INFO:fabio.utils.ExternalResources:Image multiframes.edf.bz2 successfully downloaded. 135s test_content (fabio.test.test_frames.TestEdf.test_content) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_content 135s test_frames_abort_iteration (fabio.test.test_frames.TestEdf.test_frames_abort_iteration) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_frames_abort_iteration 135s test_frames_full_iteration (fabio.test.test_frames.TestEdf.test_frames_full_iteration) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_frames_full_iteration 135s test_frames_random_access (fabio.test.test_frames.TestEdf.test_frames_random_access) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_frames_random_access 135s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.tif.bz2') 135s INFO:fabio.utils.ExternalResources:Image multiframes.tif.bz2 successfully downloaded. 135s test_content (fabio.test.test_frames.TestTiff.test_content) ... ok 135s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_content 135s test_frames_abort_iteration (fabio.test.test_frames.TestTiff.test_frames_abort_iteration) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_frames_abort_iteration 135s test_frames_full_iteration (fabio.test.test_frames.TestTiff.test_frames_full_iteration) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_frames_full_iteration 135s test_frames_random_access (fabio.test.test_frames.TestTiff.test_frames_random_access) ... ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_frames_random_access 135s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.tif.bz2') 135s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 135s test_frames_abort_iteration (fabio.test.test_frames.TestFileSeries.test_frames_abort_iteration) ... ok 135s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_frames.TestFileSeries.test_frames_abort_iteration 135s test_frames_full_iteration (fabio.test.test_frames.TestFileSeries.test_frames_full_iteration) ... ok 135s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_frames.TestFileSeries.test_frames_full_iteration 135s test_frames_random_access (fabio.test.test_frames.TestFileSeries.test_frames_random_access) ... ok 135s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_frames.TestFileSeries.test_frames_random_access 135s test_open (fabio.test.test_fabio.TestFabio.test_open) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 135s ok 135s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open 135s test_open_bytesio (fabio.test.test_fabio.TestFabio.test_open_bytesio) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 135s ok 135s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_bytesio 135s test_open_fabio_bytesio (fabio.test.test_fabio.TestFabio.test_open_fabio_bytesio) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 135s ok 135s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_fabio_bytesio 135s test_open_series (fabio.test.test_fabio.TestFabio.test_open_series) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 135s ok 135s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_series 135s test_open_series_first_filename (fabio.test.test_fabio.TestFabio.test_open_series_first_filename) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 135s ok 135s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_series_first_filename 135s test_open_series_with (fabio.test.test_fabio.TestFabio.test_open_series_with) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 135s ok 135s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_series_with 135s test_open_with (fabio.test.test_fabio.TestFabio.test_open_with) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 135s ok 135s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_with 135s test_getstats (fabio.test.codecs.test_edfimage.TestFlatEdfs.test_getstats) 135s test statistics ... INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 135s ok 135s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestFlatEdfs.test_getstats 135s test_headers (fabio.test.codecs.test_edfimage.TestFlatEdfs.test_headers) ... INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 135s ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestFlatEdfs.test_headers 135s test_read (fabio.test.codecs.test_edfimage.TestFlatEdfs.test_read) 135s check readable ... INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 135s ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestFlatEdfs.test_read 135s test_getstats (fabio.test.codecs.test_edfimage.TestBzipEdf.test_getstats) 135s test statistics ... INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 135s ok 135s INFO:memProf:Time: 0.037s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBzipEdf.test_getstats 135s test_headers (fabio.test.codecs.test_edfimage.TestBzipEdf.test_headers) ... INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 135s ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBzipEdf.test_headers 135s test_read (fabio.test.codecs.test_edfimage.TestBzipEdf.test_read) 135s check readable ... INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 135s ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBzipEdf.test_read 135s test_getstats (fabio.test.codecs.test_edfimage.TestGzipEdf.test_getstats) 135s test statistics ... INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 135s ok 135s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestGzipEdf.test_getstats 135s test_headers (fabio.test.codecs.test_edfimage.TestGzipEdf.test_headers) ... INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 135s ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestGzipEdf.test_headers 135s test_read (fabio.test.codecs.test_edfimage.TestGzipEdf.test_read) 135s check readable ... INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 135s ok 135s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestGzipEdf.test_read 135s test_read (fabio.test.codecs.test_edfimage.TestEdfs.test_read) 135s check we can read these images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 135s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('id13_badPadding.edf.bz2') 136s INFO:fabio.utils.ExternalResources:Image id13_badPadding.edf.bz2 successfully downloaded. 137s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf Mean: exp=1504.29, obt=1504.291387796402 137s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf StdDev: exp=217.61, obt=217.60628547694915 137s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.bz2 Mean: exp=1504.29, obt=1504.291387796402 137s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.bz2 StdDev: exp=217.61, obt=217.60628547694915 137s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.gz Mean: exp=1504.29, obt=1504.291387796402 137s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.gz StdDev: exp=217.61, obt=217.60628547694915 137s INFO:fabio.test.codecs.test_edfimage:id13_badPadding.edf Mean: exp=275.62, obt=275.6165885925293 137s INFO:fabio.test.codecs.test_edfimage:id13_badPadding.edf StdDev: exp=583.44, obt=583.4356660155632 137s ok 137s INFO:memProf:Time: 2.055s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfs.test_read 137s test_rebin (fabio.test.codecs.test_edfimage.TestEdfs.test_rebin) 137s test the rebin of edfdata ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 137s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('id13_badPadding.edf.bz2') 137s ok 137s INFO:memProf:Time: 0.015s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfs.test_rebin 137s test_read (fabio.test.codecs.test_edfimage.TestEdfCompressedData.test_read) 137s check we can read these images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfGzip_U16.edf.bz2') 138s INFO:fabio.utils.ExternalResources:Image edfGzip_U16.edf.bz2 successfully downloaded. 138s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfCompressed_U16.edf.bz2') 139s INFO:fabio.utils.ExternalResources:Image edfCompressed_U16.edf.bz2 successfully downloaded. 139s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfUncompressed_U16.edf.bz2') 140s INFO:fabio.utils.ExternalResources:Image edfUncompressed_U16.edf.bz2 successfully downloaded. 142s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 142s INFO:fabio.edfimage:Data stream is padded : 8389062 > required 8388608 bytes 142s ok 142s INFO:memProf:Time: 5.002s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfCompressedData.test_read 142s test_getFrame_mono (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_mono) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 143s INFO:fabio.utils.ExternalResources:Image MultiFrame.edf.bz2 successfully downloaded. 145s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 146s INFO:fabio.utils.ExternalResources:Image MultiFrame-Frame0.edf.bz2 successfully downloaded. 147s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 147s INFO:fabio.utils.ExternalResources:Image MultiFrame-Frame1.edf.bz2 successfully downloaded. 148s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 148s ok 148s INFO:memProf:Time: 6.054s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_mono 148s test_getFrame_multi (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_multi) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 148s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 148s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 148s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 148s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 148s ok 149s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_multi 149s test_next_multi (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_next_multi) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 149s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 149s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 149s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 149s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 149s ok 149s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_next_multi 149s test_openimage_multiframes (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_openimage_multiframes) 149s test if openimage can directly read first or second frame of a multi-frame ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 149s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 149s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 149s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 149s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 149s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 149s ok 149s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_openimage_multiframes 149s test_previous_mono (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_mono) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 149s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 149s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 149s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 149s ok 149s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_mono 149s test_previous_multi (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_multi) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 149s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 149s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 149s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 149s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 149s ok 149s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_multi 149s test_fastread (fabio.test.codecs.test_edfimage.TestEdfFastRead.test_fastread) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 149s ok 149s INFO:memProf:Time: 0.213s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfFastRead.test_fastread 149s testBzip2 (fabio.test.codecs.test_edfimage.TestEdfWrite.testBzip2) ... ok 149s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfWrite.testBzip2 149s testFlat (fabio.test.codecs.test_edfimage.TestEdfWrite.testFlat) ... ok 149s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfWrite.testFlat 149s testGzip (fabio.test.codecs.test_edfimage.TestEdfWrite.testGzip) ... ok 149s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfWrite.testGzip 149s test_bug_27 (fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_27) 149s import fabio ... ok 149s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_27 149s test_bug_459 (fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_459) ... ok 149s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_459 149s test_remove_metadata_header (fabio.test.codecs.test_edfimage.TestEdfRegression.test_remove_metadata_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.edf.bz2') 149s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/face.edf (frame 0) misses mandatory keys: SIZE 149s ok 149s INFO:memProf:Time: 0.011s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfRegression.test_remove_metadata_header 149s test_base (fabio.test.codecs.test_edfimage.TestBadFiles.test_base) ... INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_base.edf (frame 0) misses mandatory keys: SIZE HEADERID 149s INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_base.edf (frame 1) misses mandatory keys: SIZE HEADERID 149s ok 149s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_base 149s test_empty (fabio.test.codecs.test_edfimage.TestBadFiles.test_empty) ... ok 149s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_empty 149s test_full_frame_plus_half_header (fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_half_header) ... INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_half_header.edf (frame 0) misses mandatory keys: SIZE HEADERID 149s ok 149s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_half_header 149s test_full_frame_plus_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data.edf (frame 0) misses mandatory keys: SIZE HEADERID 149s INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data.edf (frame 1) misses mandatory keys: SIZE HEADERID 149s ERROR:fabio.edfimage:Data stream is incomplete: 131072 < expected 262144 bytes 149s ok 149s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data 149s test_full_frame_plus_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data.edf (frame 0) misses mandatory keys: SIZE HEADERID 149s INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data.edf (frame 1) misses mandatory keys: SIZE HEADERID 149s ok 149s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data 149s test_half_header (fabio.test.codecs.test_edfimage.TestBadFiles.test_half_header) ... ok 149s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_half_header 149s test_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_half_data.edf (frame 0) misses mandatory keys: SIZE HEADERID 149s ERROR:fabio.edfimage:Data stream is incomplete: 131072 < expected 262144 bytes 149s ok 149s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_half_data 149s test_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_no_data.edf (frame 0) misses mandatory keys: SIZE HEADERID 149s ok 149s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_no_data 149s test_wrong_magic (fabio.test.codecs.test_edfimage.TestBadFiles.test_wrong_magic) ... ok 149s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_wrong_magic 149s test_base (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base) ... INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base.edf.gz (frame 0) misses mandatory keys: SIZE HEADERID 149s INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base.edf.gz (frame 1) misses mandatory keys: SIZE HEADERID 149s ok 149s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base 149s test_empty (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_empty) ... ok 149s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_empty 149s test_full_frame_plus_half_header (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_half_header) ... INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_half_header.edf.gz (frame 0) misses mandatory keys: SIZE HEADERID 149s ok 149s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_half_header 149s test_full_frame_plus_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data.edf.gz (frame 0) misses mandatory keys: SIZE HEADERID 149s INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data.edf.gz (frame 1) misses mandatory keys: SIZE HEADERID 149s ok 149s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data 149s test_full_frame_plus_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data.edf.gz (frame 0) misses mandatory keys: SIZE HEADERID 149s INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data.edf.gz (frame 1) misses mandatory keys: SIZE HEADERID 149s ok 149s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data 149s test_half_header (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_half_header) ... ok 149s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_half_header 149s test_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_half_data.edf.gz (frame 0) misses mandatory keys: SIZE HEADERID 149s ok 149s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_half_data 149s test_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_ot6j5z9g_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_no_data.edf.gz (frame 0) misses mandatory keys: SIZE HEADERID 149s ok 149s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_no_data 149s test_wrong_magic (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_wrong_magic) ... ok 149s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_wrong_magic 149s test_multi_frame (fabio.test.codecs.test_edfimage.TestEdfIterator.test_multi_frame) 149s Test iterator on a multi-frame EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 149s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 149s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 149s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 149s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 149s ok 149s INFO:memProf:Time: 0.598s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfIterator.test_multi_frame 149s test_single_frame (fabio.test.codecs.test_edfimage.TestEdfIterator.test_single_frame) 149s Test iterator on a single frame EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfCompressed_U16.edf') 150s ok 150s INFO:memProf:Time: 0.316s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfIterator.test_single_frame 150s test_all_images (fabio.test.codecs.test_edfimage.TestSphere2SaxsSamples.test_all_images) ... INFO:fabio.utils.ExternalResources:Image sphere2saxs_output.tar.bz2 successfully downloaded. 150s WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/utils/ExternalResources.py:214: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 150s fd.extractall(output) 150s 150s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 150s INFO:fabio.edfimage:Data stream is padded : 80484 > required 80000 bytes 150s INFO:fabio.edfimage:Data stream is padded : 80384 > required 80000 bytes 150s INFO:fabio.edfimage:Data stream is padded : 80384 > required 80000 bytes 150s INFO:fabio.edfimage:Data stream is padded : 80384 > required 80000 bytes 150s ok 150s INFO:memProf:Time: 0.508s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestSphere2SaxsSamples.test_all_images 150s testNonAsciiHeader (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testNonAsciiHeader) 150s Non-ascii characters are skipped. ... WARNING:fabio.edfimage:Non ASCII in key-value: Drop b'mykey' = b'\xc3\xa9yvalue' 150s ok 150s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testNonAsciiHeader 150s testReadBadPadding (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadBadPadding) 150s Some old data were found with headers padded with 0xcd (issue #373) ... ok 150s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadBadPadding 150s testReadGoodPadding (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadGoodPadding) ... ok 150s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadGoodPadding 150s testReadZeroPadding (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadZeroPadding) ... ok 150s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadZeroPadding 150s test_edf6_single_raw_bf_gblk_gz (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edf6_single_raw_bf_gblk_gz) 151s Test reading gzipped data files linking to an external binary data file. ... INFO:fabio.utils.ExternalResources:Image ehf_images2.tar.bz2 successfully downloaded. 151s WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/utils/ExternalResources.py:214: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 151s fd.extractall(output) 151s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 151s ok 151s INFO:memProf:Time: 0.710s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edf6_single_raw_bf_gblk_gz 151s test_edfblocktypes (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfblocktypes) 151s Test reading (gzipped) extended edf multi frame data files with and without a general block ... INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 151s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 151s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 151s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 151s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 151s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 151s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 151s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 151s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 151s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 151s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 151s INFO:fabio.edfimage:Data stream is padded : 2875 > required 2400 bytes 151s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 151s INFO:fabio.edfimage:Data stream is padded : 2874 > required 2400 bytes 151s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 151s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 151s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 151s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 151s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 151s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 151s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 151s INFO:fabio.edfimage:Data stream is padded : 2875 > required 2400 bytes 151s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 151s INFO:fabio.edfimage:Data stream is padded : 2874 > required 2400 bytes 151s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 151s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 151s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 151s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 151s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 151s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 151s ok 151s INFO:memProf:Time: 0.118s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfblocktypes 151s test_edfmulti_raw_bf_gblk (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk) 151s Reading an uncompressed edf-multi-frame-file with references to data ... WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/utils/ExternalResources.py:214: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 151s fd.extractall(output) 151s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 151s ok 151s INFO:memProf:Time: 0.183s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk 151s test_edfmulti_raw_bf_gblk_gz (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk_gz) 151s Test reading the files of the test test_edfmulti_raw_bf_gblk after ... WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 151s ok 151s INFO:memProf:Time: 0.201s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk_gz 151s test_edfmulti_raw_dark_raw_bf_gblk (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_dark_raw_bf_gblk) 151s Linking data of several frames to different parts of a single external ... INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 151s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 151s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 151s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 151s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 151s ok 151s INFO:memProf:Time: 0.090s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_dark_raw_bf_gblk 151s test_edfsingle_raw_bf_gblk (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk) 152s Reading an uncompressed edf-single-frame-file with references to data ... WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 152s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 152s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 152s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 152s ok 152s INFO:memProf:Time: 0.097s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk 152s test_edfsingle_raw_bf_gblk_gz (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk_gz) 152s Test reading gzipped data files linking to an external binary data file. ... WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 152s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 152s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 152s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 152s ok 152s INFO:memProf:Time: 0.095s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk_gz 152s test_pitfalls (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_pitfalls) 152s multi5+headerblob_edf1.edf.gz ... INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 152s ok 152s INFO:memProf:Time: 0.118s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_pitfalls 152s test_special (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_special) 152s 09_special/face_ok.edf.gz ... INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_ok.edf.gz (frame 0) misses mandatory keys: SIZE 152s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_ok.edf.gz (frame 0) misses mandatory keys: SIZE 152s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary1.edf.gz (frame 0) misses mandatory keys: SIZE 152s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary1.edf.gz (frame 0) misses mandatory keys: SIZE 152s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary2.edf.gz (frame 0) misses mandatory keys: SIZE 152s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary2.edf.gz (frame 0) misses mandatory keys: SIZE 152s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary3.edf.gz (frame 0) misses mandatory keys: SIZE 152s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary3.edf.gz (frame 0) misses mandatory keys: SIZE 152s ok 152s INFO:memProf:Time: 0.094s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_special 152s test_bug_388 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_388) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 153s INFO:fabio.utils.ExternalResources:Image run2_1_00148.edf.bz2 successfully downloaded. 173s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 174s INFO:fabio.utils.ExternalResources:Image run2_1_00148.cbf.bz2 successfully downloaded. 174s ok 174s INFO:memProf:Time: 22.534s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_388 174s test_bug_408 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_408) 174s Bug when reading files generated by XDS ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 174s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 174s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XDS.cbf.bz2') 175s INFO:fabio.utils.ExternalResources:Image XDS.cbf.bz2 successfully downloaded. 175s ok 175s INFO:memProf:Time: 1.007s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_408 175s test_bug_528 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_528) 175s Bug when writing/reading small files ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 175s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 175s ok 175s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_528 175s test_bug_535 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_535) 175s Bug when reading files with long path in header ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 175s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 175s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('ref-test_5_0001.cbf') 176s INFO:fabio.utils.ExternalResources:Image ref-test_5_0001.cbf.bz2 successfully downloaded. 178s ok 178s INFO:memProf:Time: 2.700s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_535 178s test_byte_offset (fabio.test.codecs.test_cbfimage.TestCbfReader.test_byte_offset) 178s check byte offset algorithm ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 178s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 178s INFO:fabio.test.codecs.test_cbfimage:Timing for Numpy method : 0.093s 178s INFO:fabio.test.codecs.test_cbfimage:Timing for Cython method : 0.010s, max delta= 0 178s ok 178s INFO:memProf:Time: 0.140s RAM: 4.852 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_byte_offset 178s test_cif (fabio.test.codecs.test_cbfimage.TestCbfReader.test_cif) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 178s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 178s ok 178s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_cif 178s test_consitency_convert (fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_convert) 178s Test if an image can be read and saved and the results are "similar" ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 178s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 178s ok 178s INFO:memProf:Time: 0.085s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_convert 178s test_consitency_manual (fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_manual) 178s Test if an image can be read and saved and the results are "similar" ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 178s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 178s ok 178s INFO:memProf:Time: 0.100s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_manual 178s test_read (fabio.test.codecs.test_cbfimage.TestCbfReader.test_read) 178s check whole reader ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 178s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 178s INFO:fabio.test.codecs.test_cbfimage:Reading CBF took 0.022s whereas the same EDF took 0.000s 178s ok 178s INFO:memProf:Time: 0.054s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_read 178s test_unicode (fabio.test.codecs.test_cbfimage.TestCbfReader.test_unicode) 178s Test if an image can be read and saved to an unicode named ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 178s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 179s ok 179s INFO:memProf:Time: 0.088s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_unicode 179s test_write (fabio.test.codecs.test_cbfimage.TestCbfReader.test_write) 179s Rest writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 179s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 179s ok 179s INFO:memProf:Time: 0.090s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_write 179s testsame (fabio.test.codecs.test_dtrekimage.TestMatch.testsame) 179s test ADSC image match to EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 179s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.edf.bz2') 179s INFO:fabio.utils.ExternalResources:Image mb_LP_1_001.edf.bz2 successfully downloaded. 207s ok 207s INFO:memProf:Time: 28.617s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestMatch.testsame 207s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('HSA_1_5mg_C1_0004.img.bz2') 208s INFO:fabio.utils.ExternalResources:Image HSA_1_5mg_C1_0004.img.bz2 successfully downloaded. 209s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 209s test_read (fabio.test.codecs.test_dtrekimage.TestRealSamples.test_read) 210s check we can read flat ADSC images ... ok 210s INFO:memProf:Time: 0.748s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestRealSamples.test_read 210s test_write_and_read (fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read) ... WARNING:fabio.dtrekimage:Data type uint64 unsupported. Store it as uint32. 210s WARNING:fabio.dtrekimage:Data type int64 unsupported. Store it as int32. 210s WARNING:fabio.dtrekimage:Data type float16 unsupported. Store it as float32. 210s ok 210s INFO:memProf:Time: 0.017s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read 210s test_write_and_read_cube (fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_cube) ... ok 210s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_cube 210s test_write_and_read_empty (fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_empty) ... ok 210s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_empty 210s test_getmatch (fabio.test.codecs.test_fit2dmaskimage.TestFaceMask.test_getmatch) 210s test edf and msk are the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 210s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.edf.bz2') 210s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/face.edf (frame 0) misses mandatory keys: SIZE 210s ok 210s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestFaceMask.test_getmatch 210s test_getmatch (fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_getmatch) 210s test edf and msk are the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.msk.bz2') 210s INFO:fabio.utils.ExternalResources:Image fit2d_click.msk.bz2 successfully downloaded. 210s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.edf.bz2') 210s INFO:fabio.utils.ExternalResources:Image fit2d_click.edf.bz2 successfully downloaded. 210s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/fit2d_click.edf (frame 0) misses mandatory keys: SIZE 210s ok 210s INFO:memProf:Time: 0.333s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_getmatch 210s test_read (fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_read) 210s Check it reads a mask OK ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.msk.bz2') 210s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.edf.bz2') 210s ok 210s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_read 210s testBzip2 (fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testBzip2) ... ok 210s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testBzip2 210s testFlat (fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testFlat) ... ok 210s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testFlat 210s testGzip (fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testGzip) ... ok 210s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testGzip 210s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.spr.bz2') 210s INFO:fabio.utils.ExternalResources:Image example.spr.bz2 successfully downloaded. 212s test_read (fabio.test.codecs.test_fit2dspreadsheetimage.TestRealSamples.test_read) 215s check we can read flat ADSC images ... ok 215s INFO:memProf:Time: 3.680s RAM: 0.000 Mb fabio.test.codecs.test_fit2dspreadsheetimage.TestRealSamples.test_read 215s test_read (fabio.test.codecs.test_geimage.TestGE.test_read) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_aSI_detector_image_1529.bz2') 216s INFO:fabio.utils.ExternalResources:Image GE_aSI_detector_image_1529.bz2 successfully downloaded. 218s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_aSI_detector_image_1529.gz') 218s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_aSI_detector_image_1529') 220s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_image_1frame_intact_header.ge') 221s INFO:fabio.utils.ExternalResources:Image GE_image_1frame_intact_header.ge.bz2 successfully downloaded. 223s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_image_1frame_blanked_header.ge') 224s INFO:fabio.utils.ExternalResources:Image GE_image_1frame_blanked_header.ge.bz2 successfully downloaded. 225s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('dark_before_000428.edf.ge5') 226s INFO:fabio.utils.ExternalResources:Image dark_before_000428.edf.ge5.bz2 successfully downloaded. 239s ok 239s INFO:memProf:Time: 24.140s RAM: 0.000 Mb fabio.test.codecs.test_geimage.TestGE.test_read 239s test_aux (fabio.test.codecs.test_mar345image.TestMar345.test_aux) 239s test auxillary functions ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 240s INFO:fabio.utils.ExternalResources:Image example.mar2300.bz2 successfully downloaded. 240s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 241s INFO:fabio.utils.ExternalResources:Image Fe3O4_023_101.mar2560.bz2 successfully downloaded. 242s ok 242s INFO:memProf:Time: 2.143s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_aux 242s test_byteswap_write (fabio.test.codecs.test_mar345image.TestMar345.test_byteswap_write) 242s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 242s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 245s ok 245s INFO:memProf:Time: 2.966s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_byteswap_write 245s test_memoryleak (fabio.test.codecs.test_mar345image.TestMar345.test_memoryleak) 245s This test takes a lot of time, so only in debug mode. ... skipped 'very slow test' 245s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_memoryleak 245s test_read (fabio.test.codecs.test_mar345image.TestMar345.test_read) 245s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 245s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 245s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300') 245s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 245s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.gz') 245s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560') 246s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 246s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.gz') 246s ok 246s INFO:memProf:Time: 1.531s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_read 246s test_write (fabio.test.codecs.test_mar345image.TestMar345.test_write) 246s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 246s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 249s ok 249s INFO:memProf:Time: 2.991s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_write 249s test_read (fabio.test.codecs.test_brukerimage.TestBruker.test_read) 249s see if we can read the test image ... ok 249s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestBruker.test_read 249s test_read (fabio.test.codecs.test_brukerimage.TestBzipBruker.test_read) 249s see if we can read the test image ... ok 249s INFO:memProf:Time: 0.021s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestBzipBruker.test_read 249s test_read (fabio.test.codecs.test_brukerimage.TestGzipBruker.test_read) 249s see if we can read the test image ... ok 249s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestGzipBruker.test_read 249s test_read (fabio.test.codecs.test_brukerimage.TestRealImg.test_read) 249s check we can read bruker images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 249s ok 249s INFO:memProf:Time: 0.020s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestRealImg.test_read 249s test_write (fabio.test.codecs.test_brukerimage.TestRealImg.test_write) 249s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 249s ok 249s INFO:memProf:Time: 0.118s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestRealImg.test_write 249s test_linear (fabio.test.codecs.test_brukerimage.TestBrukerLinear.test_linear) 249s test for self consistency of random data read/write ... WARNING:fabio.brukerimage:performing correction with slope=5.960448135055166e-08, offset=3.5940727e-07 (LINEAR=5.960448135055166e-08 3.5940727e-07) 249s ok 249s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestBrukerLinear.test_linear 249s test_conversion (fabio.test.codecs.test_bruker100image.TestBruker100.test_conversion) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 250s INFO:fabio.utils.ExternalResources:Image NaCl_10_01_0009.npy.bz2 successfully downloaded. 251s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 251s INFO:fabio.utils.ExternalResources:Image NaCl_10_01_0009.sfrm.bz2 successfully downloaded. 251s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('testcbf.cbf.bz2') 251s INFO:fabio.utils.ExternalResources:Image testcbf.cbf.bz2 successfully downloaded. 251s ok 251s INFO:memProf:Time: 2.251s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_conversion 251s test_read (fabio.test.codecs.test_bruker100image.TestBruker100.test_read) 251s check we can read bruker100 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 251s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 251s ok 251s INFO:memProf:Time: 0.021s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_read 251s test_same (fabio.test.codecs.test_bruker100image.TestBruker100.test_same) 252s check we can read bruker100 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 252s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 252s ok 252s INFO:memProf:Time: 0.058s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_same 252s test_split_merge (fabio.test.codecs.test_bruker100image.TestBruker100.test_split_merge) 252s Pretty challanging random example ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 252s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 252s INFO:fabio.test.codecs.test_bruker100image:size of underflow: (65154,) overflow1 (100,) overflow2: (95,) 252s INFO:fabio.test.codecs.test_bruker100image:size of underflow: (1527,) overflow1 (149,) overflow2: (95,) 252s INFO:fabio.test.codecs.test_bruker100image:size of underflow: (0,) overflow1 (1540,) overflow2: (1486,) 252s ok 252s INFO:memProf:Time: 0.007s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_split_merge 252s test_write (fabio.test.codecs.test_bruker100image.TestBruker100.test_write) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 252s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 252s ok 252s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_write 252s test_read (fabio.test.codecs.test_mccdimage.TestFlatMccds.test_read) 252s check we can read MarCCD images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('corkcont2_H_0089.mccd.bz2') 252s INFO:fabio.utils.ExternalResources:Image corkcont2_H_0089.mccd.bz2 successfully downloaded. 254s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.bz2') 254s ok 254s INFO:memProf:Time: 2.629s RAM: 0.000 Mb fabio.test.codecs.test_mccdimage.TestFlatMccds.test_read 254s test_read_openimage (fabio.test.codecs.test_mccdimage.TestNormalTiffOK.test_read_openimage) ... ok 254s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_mccdimage.TestNormalTiffOK.test_read_openimage 254s test_read (fabio.test.codecs.test_oxdimage.TestOxd.test_read) 254s Test reading of compressed OXD images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 254s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 254s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('100nmfilmonglass_1_1.img.bz2') 255s INFO:fabio.utils.ExternalResources:Image 100nmfilmonglass_1_1.img.bz2 successfully downloaded. 255s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus300k.rod_img.bz2') 255s INFO:fabio.utils.ExternalResources:Image pilatus300k.rod_img.bz2 successfully downloaded. 256s INFO:fabio.OXDimage:Compressed with the TY5 compression 256s INFO:fabio.OXDimage:TY5 decompression is slow for now 258s INFO:fabio.OXDimage:TY5: Exception: 16bits: 2844, 32bits: 0 258s ok 258s INFO:memProf:Time: 3.903s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxd.test_read 258s test_write (fabio.test.codecs.test_oxdimage.TestOxd.test_write) 258s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 258s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 258s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('100nmfilmonglass_1_1.img.bz2') 258s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus300k.rod_img.bz2') 258s INFO:fabio.test.codecs.test_oxdimage:Skip write test for now 258s INFO:fabio.OXDimage:Compressed with the TY5 compression 258s INFO:fabio.OXDimage:TY5 decompression is slow for now 260s INFO:fabio.OXDimage:TY5: Exception: 16bits: 2844, 32bits: 0 260s INFO:fabio.test.codecs.test_oxdimage:Skip write test for now 260s INFO:fabio.test.codecs.test_oxdimage:Skip write test for now 260s ok 260s INFO:memProf:Time: 1.821s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxd.test_write 260s test_same (fabio.test.codecs.test_oxdimage.TestOxdSame.test_same) 260s test if images are actually the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 260s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 260s ok 260s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxdSame.test_same 260s test_same (fabio.test.codecs.test_oxdimage.TestOxdBig.test_same) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('d80_60s.img.bz2') 261s INFO:fabio.utils.ExternalResources:Image d80_60s.img.bz2 successfully downloaded. 264s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('d80_60s.edf.bz2') 265s INFO:fabio.utils.ExternalResources:Image d80_60s.edf.bz2 successfully downloaded. 269s WARNING:fabio.edfimage:Unknown compression scheme TY1 269s ok 269s INFO:memProf:Time: 9.296s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxdBig.test_same 269s test_convert (fabio.test.codecs.test_oxdimage.TestConvert.test_convert) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 269s WARNING:fabio.OXDimage:Enforce TY1 compression 269s ok 269s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestConvert.test_convert 269s test_read (fabio.test.codecs.test_kcdimage.TestKcd.test_read) 269s check we can read kcd images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.kcd.bz2') 270s INFO:fabio.utils.ExternalResources:Image i01f0001.kcd.bz2 successfully downloaded. 271s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.edf.bz2') 271s INFO:fabio.utils.ExternalResources:Image i01f0001.edf.bz2 successfully downloaded. 274s ok 274s INFO:memProf:Time: 4.281s RAM: 0.000 Mb fabio.test.codecs.test_kcdimage.TestKcd.test_read 274s test_same (fabio.test.codecs.test_kcdimage.TestKcd.test_same) 274s see if we can read kcd images and if they are the same as the EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.kcd.bz2') 274s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.edf.bz2') 274s ok 274s INFO:memProf:Time: 0.434s RAM: 0.000 Mb fabio.test.codecs.test_kcdimage.TestKcd.test_same 274s test_bug502 (fabio.test.codecs.test_tifimage.TestTif.test_bug502) 274s Test the reading of a frame with wrong Photometric interpretation ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('frame_00017.npy') 275s INFO:fabio.utils.ExternalResources:Image frame_00017.npy.bz2 successfully downloaded. 282s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('frame_00017.tif') 284s INFO:fabio.utils.ExternalResources:Image frame_00017.tif.bz2 successfully downloaded. 292s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 292s ok 292s INFO:memProf:Time: 17.584s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_bug502 292s test_frame (fabio.test.codecs.test_tifimage.TestTif.test_frame) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.bz2') 292s INFO:fabio.utils.ExternalResources:Image Feb09-bright-00.300s_WAXS.bz2 successfully downloaded. 293s WARNING:fabio.TiffIO:Bogus StripByteCounts information 293s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.gz') 293s WARNING:fabio.TiffIO:Bogus StripByteCounts information 293s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS') 293s WARNING:fabio.TiffIO:Bogus StripByteCounts information 293s ok 293s INFO:memProf:Time: 1.257s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_frame 293s test_header (fabio.test.codecs.test_tifimage.TestTif.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.bz2') 293s WARNING:fabio.TiffIO:Bogus StripByteCounts information 293s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.gz') 293s WARNING:fabio.TiffIO:Bogus StripByteCounts information 293s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS') 293s WARNING:fabio.TiffIO:Bogus StripByteCounts information 293s ok 293s INFO:memProf:Time: 0.101s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_header 293s test_read (fabio.test.codecs.test_tifimage.TestTif.test_read) 293s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.bz2') 293s WARNING:fabio.TiffIO:Bogus StripByteCounts information 293s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.gz') 293s WARNING:fabio.TiffIO:Bogus StripByteCounts information 293s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS') 293s WARNING:fabio.TiffIO:Bogus StripByteCounts information 293s ok 293s INFO:memProf:Time: 0.110s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_read 293s test1 (fabio.test.codecs.test_tifimage.TestGzipTif.test1) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('oPPA_5grains_0001.tif.bz2') 293s INFO:fabio.utils.ExternalResources:Image oPPA_5grains_0001.tif.bz2 successfully downloaded. 293s ok 293s INFO:memProf:Time: 0.338s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestGzipTif.test1 293s test1 (fabio.test.codecs.test_tifimage.TestTif_Rect.test1) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('testmap1_0002.tif.bz2') 293s INFO:fabio.utils.ExternalResources:Image testmap1_0002.tif.bz2 successfully downloaded. 293s ok 293s INFO:memProf:Time: 0.147s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_Rect.test1 293s test1 (fabio.test.codecs.test_tifimage.TestTifImage_A0009.test1) 293s Testing packbit comressed data tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('a0009.tif.bz2') 294s INFO:fabio.utils.ExternalResources:Image a0009.tif.bz2 successfully downloaded. 295s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('a0009.edf.bz2') 295s INFO:fabio.utils.ExternalResources:Image a0009.edf.bz2 successfully downloaded. 295s WARNING:fabio.TiffIO:Non standard TIFF. Rows per strip TAG missing 295s WARNING:fabio.TiffIO:Non standard TIFF. Strip byte counts TAG missing 295s ok 295s INFO:memProf:Time: 1.926s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_A0009.test1 295s test1 (fabio.test.codecs.test_tifimage.TestTifImage_fit2d.test1) 295s Testing packbit comressed data tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 296s INFO:fabio.utils.ExternalResources:Image fit2d.tif.bz2 successfully downloaded. 296s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.edf.bz2') 296s INFO:fabio.utils.ExternalResources:Image fit2d.edf.bz2 successfully downloaded. 296s WARNING:fabio.TiffIO:TIFF file tag 270 contains non ASCII/UTF-8 characters. 296s WARNING:fabio.edfimage:Unknown compression scheme FALSE 296s ok 296s INFO:memProf:Time: 0.285s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_fit2d.test1 296s test1 (fabio.test.codecs.test_tifimage.TestTifImage_Packbits.test1) 296s Testing packbit comressed data tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('oPPA_5grains_0001.tif.bz2') 296s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('oPPA_5grains_0001.edf.bz2') 296s INFO:fabio.utils.ExternalResources:Image oPPA_5grains_0001.edf.bz2 successfully downloaded. 296s ok 296s INFO:memProf:Time: 0.486s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_Packbits.test1 296s test1 (fabio.test.codecs.test_tifimage.TestTifImage_Pilatus.test1) 296s Testing pilatus tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus2M.tif.bz2') 297s INFO:fabio.utils.ExternalResources:Image pilatus2M.tif.bz2 successfully downloaded. 305s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus2M.edf.bz2') 305s INFO:fabio.utils.ExternalResources:Image pilatus2M.edf.bz2 successfully downloaded. 313s WARNING:fabio.TiffIO:TIFF file tag 270 contains non ASCII/UTF-8 characters. 314s ok 314s INFO:memProf:Time: 17.686s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_Pilatus.test1 314s test_pil (fabio.test.codecs.test_tifimage.TestTif_Colormap.test_pil) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('indexed_color.tif.bz2') 314s INFO:fabio.utils.ExternalResources:Image indexed_color.tif.bz2 successfully downloaded. 314s ok 314s INFO:memProf:Time: 0.180s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_Colormap.test_pil 314s test_tiffio (fabio.test.codecs.test_tifimage.TestTif_Colormap.test_tiffio) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('indexed_color.tif.bz2') 314s WARNING:fabio.tifimage:Third dimension is the color 314s WARNING:fabio.tifimage:Third dimension is the color 314s WARNING:fabio.tifimage:Third dimension is the color 314s ok 314s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_Colormap.test_tiffio 315s test_all_images (fabio.test.codecs.test_tifimage.TestTif_LibTiffPic.test_all_images) ... INFO:fabio.utils.ExternalResources:Image libtiffpic.tar.gz successfully downloaded. 315s WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/utils/ExternalResources.py:214: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 315s fd.extractall(output) 315s 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif with TiffIO due to Unsupported number of bits for unsigned int: (4, 4, 4), trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif: no tiff reader managed to read the file. 315s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/dscf0013.tif with TiffIO due to could not broadcast input array from shape (10,640,3) into shape (15,640,3), trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/dscf0013.tif with PIL: image file is truncated (1280 bytes not processed) 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/dscf0013.tif: no tiff reader managed to read the file. 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif with TiffIO due to Unsupported number of bits for unsigned int: (10, 10, 10), trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif: no tiff reader managed to read the file. 315s WARNING:fabio.tifimage:Third dimension is the color 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif with TiffIO due to Unsupported number of bits for unsigned int: (12, 12, 12), trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif: no tiff reader managed to read the file. 315s WARNING:fabio.TiffIO:Data at tag id '37439' is smaller than expected 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif: no tiff reader managed to read the file. 315s WARNING:fabio.TiffIO:Data at tag id '37439' is smaller than expected 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif: no tiff reader managed to read the file. 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/zackthecat.tif with TiffIO due to 273 is not in list, trying PIL 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif with TiffIO due to Unsupported number of bits for unsigned int: (10, 10, 10), trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif: no tiff reader managed to read the file. 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-02.tif with TiffIO due to Unsupported number of bits for unsigned int: 2, trying PIL 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif with TiffIO due to Unsupported number of bits for unsigned int: (14, 14, 14), trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif: no tiff reader managed to read the file. 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-08.tif with TiffIO due to cannot reshape array of size 3139 into shape (73,3), trying PIL 315s WARNING:fabio.tifimage:Third dimension is the color 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif with TiffIO due to Unsupported number of bits for unsigned int: (12, 12, 12), trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif: no tiff reader managed to read the file. 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-04.tif with TiffIO due to Unsupported number of bits for unsigned int: 4, trying PIL 315s WARNING:fabio.tifimage:Third dimension is the color 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/ycbcr-cat.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif with TiffIO due to Unsupported number of bits for unsigned int: (14, 14, 14), trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif: no tiff reader managed to read the file. 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif with TiffIO due to Unsupported number of bits for unsigned int: 6, trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif: no tiff reader managed to read the file. 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/fax2d.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif with TiffIO due to Unsupported number of bits for unsigned int: 10, trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif: no tiff reader managed to read the file. 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-16.tif with TiffIO due to cannot reshape array of size 3139 into shape (73,3), trying PIL 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/strike.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 315s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-08.tif with TiffIO due to Unsupported number of bits for unsigned int: (8, 8, 8, 8), trying PIL 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif with TiffIO due to Unsupported number of bits for unsigned int: 12, trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif: no tiff reader managed to read the file. 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/cramps-tile.tif with TiffIO due to cannot reshape array of size 65536 into shape (800), trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/cramps-tile.tif with PIL: image file is truncated (126 bytes not processed) 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/cramps-tile.tif: no tiff reader managed to read the file. 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif with TiffIO due to %d format: a real number is required, not bytes, trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif: no tiff reader managed to read the file. 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/text.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 315s ThunderDecode: Not enough data at scanline 320 (0 != 1512). 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/smallliz.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/g3test.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif with TiffIO due to Unsupported number of bits for unsigned int: 14, trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif: no tiff reader managed to read the file. 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/oxford.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 315s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-08.tif with TiffIO due to Unsupported number of bits for unsigned int: (8, 8, 8, 8), trying PIL 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/quad-tile.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/quad-lzw.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif with TiffIO due to %d format: a real number is required, not bytes, trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif: no tiff reader managed to read the file. 315s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-16.tif with TiffIO due to Unsupported number of bits for unsigned int: (16, 16, 16, 16), trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-16.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-16.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-16.tif: no tiff reader managed to read the file. 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/jim___ah.tif with TiffIO due to Unsupported number of bits for unsigned int: 1, trying PIL 315s WARNING:fabio.tifimage:Third dimension is the color 315s WARNING:fabio.tifimage:Third dimension is the color 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-palette-02.tif with TiffIO due to Unsupported number of bits for unsigned int: 2, trying PIL 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif: no tiff reader managed to read the file. 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif with TiffIO due to Unsupported number of bits for unsigned int: (2, 2, 2), trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif: no tiff reader managed to read the file. 315s WARNING:fabio.tifimage:Third dimension is the color 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-palette-04.tif with TiffIO due to Unsupported number of bits for unsigned int: 4, trying PIL 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif with TiffIO due to Unsupported number of bits for unsigned int: 24, trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif: no tiff reader managed to read the file. 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif with TiffIO due to Unsupported number of bits for unsigned int: (4, 4, 4), trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif: no tiff reader managed to read the file. 315s WARNING:fabio.TiffIO:Data at tag id '37439' is smaller than expected 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif: no tiff reader managed to read the file. 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/ladoga.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 315s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-16.tif with TiffIO due to Unsupported number of bits for unsigned int: (16, 16, 16, 16), trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-16.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-16.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-16.tif: no tiff reader managed to read the file. 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/quad-jpeg.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif with TiffIO due to Unsupported number of bits for unsigned int: (2, 2, 2), trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif: no tiff reader managed to read the file. 315s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif with TiffIO due to cannot reshape array of size 2044 into shape (73,3), trying PIL 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif' mode='rb' closefd=True> 315s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif: no tiff reader managed to read the file. 315s WARNING:fabio.tifimage:Third dimension is the color 315s ok 315s INFO:memProf:Time: 0.855s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_LibTiffPic.test_all_images 315s test_invert (fabio.test.codecs.test_xsdimage.TestXSD.test_invert) 315s Tests that 2 matrixes are invert ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.edf.bz2') 315s INFO:fabio.utils.ExternalResources:Image XSDataImage.edf.bz2 successfully downloaded. 316s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.xml.bz2') 317s INFO:fabio.utils.ExternalResources:Image XSDataImage.xml.bz2 successfully downloaded. 317s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImageInv.xml.bz2') 318s INFO:fabio.utils.ExternalResources:Image XSDataImageInv.xml.bz2 successfully downloaded. 318s ok 318s INFO:memProf:Time: 2.863s RAM: 0.000 Mb fabio.test.codecs.test_xsdimage.TestXSD.test_invert 318s test_read (fabio.test.codecs.test_xsdimage.TestXSD.test_read) 318s Test reading of XSD images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.edf.bz2') 318s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.xml.bz2') 318s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImageInv.xml.bz2') 318s INFO:fabio.test.codecs.test_xsdimage:XSDataImage.xml 667.15 667.1489268499176 318s INFO:fabio.test.codecs.test_xsdimage:XSDataImageInv.xml 0.01 0.010599090552568758 318s ok 318s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.codecs.test_xsdimage.TestXSD.test_read 318s test_same (fabio.test.codecs.test_xsdimage.TestXSD.test_same) 318s test if an image is the same as the EDF equivalent ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.edf.bz2') 318s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.xml.bz2') 318s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImageInv.xml.bz2') 318s ok 318s INFO:memProf:Time: 0.005s RAM: 0.000 Mb fabio.test.codecs.test_xsdimage.TestXSD.test_same 318s test_memoryleak (fabio.test.codecs.test_raxisimage.TestRaxisImage.test_memoryleak) 318s This test takes a lot of time, so only in debug mode. ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mgzn-20hpt.img.bz2') 318s INFO:fabio.utils.ExternalResources:Image mgzn-20hpt.img.bz2 successfully downloaded. 319s ok 319s INFO:memProf:Time: 1.183s RAM: 0.000 Mb fabio.test.codecs.test_raxisimage.TestRaxisImage.test_memoryleak 319s test_read (fabio.test.codecs.test_raxisimage.TestRaxisImage.test_read) 319s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mgzn-20hpt.img.bz2') 319s ok 319s INFO:memProf:Time: 0.475s RAM: 0.000 Mb fabio.test.codecs.test_raxisimage.TestRaxisImage.test_read 319s test_read (fabio.test.codecs.test_pnmimage.TestPNM.test_read) 319s check we can read pnm images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('image0001.pgm.bz2') 320s INFO:fabio.utils.ExternalResources:Image image0001.pgm.bz2 successfully downloaded. 320s ok 320s INFO:memProf:Time: 0.164s RAM: 0.000 Mb fabio.test.codecs.test_pnmimage.TestPNM.test_read 320s test_write (fabio.test.codecs.test_pnmimage.TestPNM.test_write) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('image0001.pgm.bz2') 320s ok 320s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pnmimage.TestPNM.test_write 320s test_multidim (fabio.test.codecs.test_numpyimage.TestNumpy.test_multidim) ... ok 320s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_numpyimage.TestNumpy.test_multidim 320s test_read (fabio.test.codecs.test_numpyimage.TestNumpy.test_read) 320s check we can read pnm images ... ok 320s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_numpyimage.TestNumpy.test_read 320s test_write (fabio.test.codecs.test_numpyimage.TestNumpy.test_write) 320s check we can write numpy images ... ok 320s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_numpyimage.TestNumpy.test_write 320s test_frame (fabio.test.codecs.test_pilatusimage.TestPilatus.test_frame) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.bz2') 320s INFO:fabio.utils.ExternalResources:Image lysb_5mg-1.90s_SAXS.bz2 successfully downloaded. 321s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.gz') 321s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS') 322s ok 322s INFO:memProf:Time: 2.457s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus.test_frame 322s test_header (fabio.test.codecs.test_pilatusimage.TestPilatus.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.bz2') 322s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.gz') 322s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS') 322s ok 322s INFO:memProf:Time: 0.030s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus.test_header 322s test_read (fabio.test.codecs.test_pilatusimage.TestPilatus.test_read) 322s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.bz2') 322s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.gz') 322s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS') 322s ok 322s INFO:memProf:Time: 0.032s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus.test_read 322s test_header (fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif.bz2') 323s INFO:fabio.utils.ExternalResources:Image Pilatus1M.tif.bz2 successfully downloaded. 323s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 323s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif') 323s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 323s ok 323s INFO:memProf:Time: 0.802s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_header 323s test_read (fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_read) 323s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif.bz2') 323s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 323s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif') 323s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 323s ok 323s INFO:memProf:Time: 0.063s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_read 323s test_bug_479 (fabio.test.codecs.test_eigerimage.TestEiger.test_bug_479) ... WARNING:fabio.eigerimage:hdf5plugin is needed for bitshuffle-LZ4 compression, falling back on gzip (slower) 323s ok 323s INFO:memProf:Time: 0.005s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_bug_479 323s test_frames_abort_iteration (fabio.test.codecs.test_eigerimage.TestEiger.test_frames_abort_iteration) ... ok 323s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_frames_abort_iteration 323s test_frames_full_iteration (fabio.test.codecs.test_eigerimage.TestEiger.test_frames_full_iteration) ... ok 323s INFO:memProf:Time: 0.005s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_frames_full_iteration 323s test_frames_random_access (fabio.test.codecs.test_eigerimage.TestEiger.test_frames_random_access) ... ok 323s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_frames_random_access 323s test_open (fabio.test.codecs.test_eigerimage.TestEiger.test_open) 323s check we can read images from Eiger ... ok 323s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_open 323s test_read (fabio.test.codecs.test_eigerimage.TestEiger.test_read) 323s check we can read images from Eiger ... ok 323s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_read 323s test_write (fabio.test.codecs.test_eigerimage.TestEiger.test_write) ... WARNING:fabio.eigerimage:hdf5plugin is needed for bitshuffle-LZ4 compression, falling back on gzip (slower) 323s ok 323s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_write 323s test_iterate (fabio.test.codecs.test_hdf5image.TestHdf5.test_iterate) ... ok 323s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_iterate 323s test_next_frames (fabio.test.codecs.test_hdf5image.TestHdf5.test_next_frames) 323s check the legacy next API ... ok 323s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_next_frames 323s test_open (fabio.test.codecs.test_hdf5image.TestHdf5.test_open) 323s check we can read images from Eiger ... ok 323s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_open 323s test_read (fabio.test.codecs.test_hdf5image.TestHdf5.test_read) 323s check we can read images from Eiger ... ok 323s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_read 323s test_mask (fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_mask) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.f2d.bz2') 323s INFO:fabio.utils.ExternalResources:Image fit2d.f2d.bz2 successfully downloaded. 323s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 323s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.f2d.bz2') 324s INFO:fabio.utils.ExternalResources:Image Pilatus1M.f2d.bz2 successfully downloaded. 327s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.cbf.bz2') 327s INFO:fabio.utils.ExternalResources:Image Pilatus1M.cbf.bz2 successfully downloaded. 327s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.msk.bz2') 327s INFO:fabio.utils.ExternalResources:Image Pilatus1M.msk.bz2 successfully downloaded. 327s ok 327s INFO:memProf:Time: 4.433s RAM: 0.000 Mb fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_mask 327s test_match (fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_match) 327s test edf and msk are the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.f2d.bz2') 327s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 327s WARNING:fabio.TiffIO:TIFF file tag 270 contains non ASCII/UTF-8 characters. 327s ok 327s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_match 327s test_read (fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_read) 328s Check it reads a mask OK ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.f2d.bz2') 328s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 328s ok 328s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_read 328s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v2.SPE.bz2') 328s INFO:fabio.utils.ExternalResources:Image v2.SPE.bz2 successfully downloaded. 328s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v2_converted.SPE.bz2') 329s INFO:fabio.utils.ExternalResources:Image v2_converted.SPE.bz2 successfully downloaded. 329s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v3.spe.bz2') 329s INFO:fabio.utils.ExternalResources:Image v3.spe.bz2 successfully downloaded. 329s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v3_custom_roi.spe.bz2') 329s INFO:fabio.utils.ExternalResources:Image v3_custom_roi.spe.bz2 successfully downloaded. 329s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v3_2frames.spe.bz2') 330s INFO:fabio.utils.ExternalResources:Image v3_2frames.spe.bz2 successfully downloaded. 333s test_calibration (fabio.test.codecs.test_speimage.TestSpeImage.test_calibration) ... ok 333s INFO:memProf:Time: 0.017s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_calibration 333s test_center_wavelength (fabio.test.codecs.test_speimage.TestSpeImage.test_center_wavelength) ... ok 333s INFO:memProf:Time: 0.011s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_center_wavelength 333s test_detector (fabio.test.codecs.test_speimage.TestSpeImage.test_detector) ... ok 333s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_detector 333s test_exposure_time (fabio.test.codecs.test_speimage.TestSpeImage.test_exposure_time) ... ok 333s INFO:memProf:Time: 0.025s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_exposure_time 333s test_fabio_integration (fabio.test.codecs.test_speimage.TestSpeImage.test_fabio_integration) ... ok 333s INFO:memProf:Time: 0.114s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_fabio_integration 333s test_grating (fabio.test.codecs.test_speimage.TestSpeImage.test_grating) ... ok 333s INFO:memProf:Time: 0.010s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_grating 333s test_multiple_frames (fabio.test.codecs.test_speimage.TestSpeImage.test_multiple_frames) ... ok 333s INFO:memProf:Time: 0.022s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_multiple_frames 333s test_read_data (fabio.test.codecs.test_speimage.TestSpeImage.test_read_data) ... ok 333s INFO:memProf:Time: 0.010s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_read_data 333s test_reading_version2_spe (fabio.test.codecs.test_speimage.TestSpeImage.test_reading_version2_spe) ... ok 333s INFO:memProf:Time: 0.011s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_reading_version2_spe 333s test_roi (fabio.test.codecs.test_speimage.TestSpeImage.test_roi) ... ok 333s INFO:memProf:Time: 0.015s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_roi 333s test_time (fabio.test.codecs.test_speimage.TestSpeImage.test_time) ... ok 333s INFO:memProf:Time: 0.011s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_time 333s test_read_empty_file (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_empty_file) ... ok 333s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_empty_file 333s test_read_failing_file (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_failing_file) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 333s INFO:fabio.utils.ExternalResources:Image rand_uint8.jpg.bz2 successfully downloaded. 333s ok 333s INFO:memProf:Time: 0.141s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_failing_file 333s test_read_missing_file (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_missing_file) ... ok 333s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_missing_file 333s test_read_uint8 (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 333s ok 333s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_uint8 333s test_read_uint8 (fabio.test.codecs.test_jpegimage.TestJpegImageInsideFabio.test_read_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 333s ok 333s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImageInsideFabio.test_read_uint8 333s test_with_pil (fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_with_pil) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 333s ok 333s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_with_pil 333s test_without_pil (fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_without_pil) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 333s ok 333s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_without_pil 333s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_missing_file) ... ok 333s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_missing_file 333s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint16) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint16.jp2.bz2') 333s INFO:fabio.utils.ExternalResources:Image binned_data_uint16.jp2.bz2 successfully downloaded. 333s ok 333s INFO:memProf:Time: 0.227s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint16 333s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint8.jp2.bz2') 333s INFO:fabio.utils.ExternalResources:Image binned_data_uint8.jp2.bz2 successfully downloaded. 333s ok 333s INFO:memProf:Time: 0.213s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint8 333s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_wrong_format) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 333s ok 333s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_wrong_format 333s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_missing_file) ... ok 333s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_missing_file 333s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint16) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint16.jp2.bz2') 333s ok 333s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint16 333s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint8.jp2.bz2') 333s ok 333s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint8 333s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_wrong_format) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 333s ok 333s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_wrong_format 333s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_missing_file) ... skipped 'glymur is not available or too old' 333s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_missing_file 333s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint16) ... skipped 'glymur is not available or too old' 333s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint16 333s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint8) ... skipped 'glymur is not available or too old' 333s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint8 333s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_wrong_format) ... skipped 'glymur is not available or too old' 333s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_wrong_format 333s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_missing_file) ... ok 333s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_missing_file 333s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint16) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint16.jp2.bz2') 333s ok 333s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint16 333s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint8.jp2.bz2') 333s ok 333s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint8 333s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_wrong_format) ... /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.bz2 rb 333s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.bz2 rb 333s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.gz rb fabio. 333s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.gz rb fabio. 333s /tmp/fabio_testdata_ubuntu/GE_aSI_detector_image_1529.bz2 rb 333s /tmp/fabio_testdata_ubuntu/GE_aSI_detector_image_1529.gz rb fabio. 333s /tmp/fabio_testdata_ubuntu/corkcont2_H_0089.mccd.bz2 rb 333s /tmp/fabio_testdata_ubuntu/corkcont2_H_0089.mccd.gz rb fabio. 333s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.bz2 rb 333s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.gz rb fabio. 333s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.bz2 rb 333s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.gz rb fabio. 333s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.bz2 rb 333s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.gz rb fabio. 333s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.bz2 rb 333s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.gz rb fabio. 333s /tmp/fabio_testdata_ubuntu/oPPA_5grains_0001.tif.gz rb fabio. 333s /tmp/fabio_testdata_ubuntu/testmap1_0002.tif.gz rb fabio. 333s /tmp/fabio_testdata_ubuntu/testmap1_0002.tif.bz2 rb 333s /tmp/fabio_testdata_ubuntu/fit2d.tif.bz2 rb 333s /tmp/fabio_testdata_ubuntu/oPPA_5grains_0001.tif.bz2 rb 333s /tmp/fabio_testdata_ubuntu/pilatus2M.tif.bz2 rb 333s /tmp/fabio_testdata_ubuntu/indexed_color.tif.gz rb fabio. 333s /tmp/fabio_testdata_ubuntu/indexed_color.tif.bz2 rb 333s /tmp/fabio_testdata_ubuntu/indexed_color.tif.gz rb fabio. 333s /tmp/fabio_testdata_ubuntu/indexed_color.tif.bz2 rb 333s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.bz2 rb 333s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.gz rb fabio. 333s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.bz2 rb 333s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.gz rb fabio. 333s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.bz2 rb 333s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.gz rb fabio. 333s /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 rb 333s /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 rb 333s 0 333s 1 333s 2 333s 3 333s 4 333s 5 333s 6 333s 7 333s 8 333s 9 333s 10 333s 11 333s 12 333s 13 333s 14 333s 15 333s 16 333s 17 333s 18 333s 19 333s 20 333s 21 333s 22 333s 23 333s 24 333s 25 333s 26 333s 27 333s 28 333s 29 333s 30 333s 31 333s 32 333s 33 333s 34 333s 35 333s 36 333s 37 333s 38 333s 39 333s 40 333s 41 333s 42 333s 43 333s 44 333s 45 333s 46 333s 47 333s 48 333s 49 333s jpeg2kimage.PIL: 333s jpeg2kimage.PIL: 333s jpeg2kimage.PIL: 333s jpeg2kimage.PIL: 333s jpeg2kimage.PIL: 333s jpeg2kimage.PIL: 333s jpeg2kimage.PIL: 333s jpeg2kimage.PIL: 333s jpeg2kimage.PIL: 333s jpeg2kimage.PIL: 333s jpeg2kimage.PIL: 333s jpeg2kimage.PIL: INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 333s ok 333s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_wrong_format 334s test_read (fabio.test.codecs.test_mpaimage.TestMpa.test_read) 334s Test the reading of multiwire images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mpa_test.mpa.bz2') 334s INFO:fabio.utils.ExternalResources:Image mpa_test.mpa.bz2 successfully downloaded. 338s ok 338s INFO:memProf:Time: 4.449s RAM: 0.000 Mb fabio.test.codecs.test_mpaimage.TestMpa.test_read 338s test_read (fabio.test.codecs.test_dm3image.TestDm3Image.test_read) 338s check we can read dm3 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('ref_d20x_310mm.dm3.bz2') 339s INFO:fabio.utils.ExternalResources:Image ref_d20x_310mm.dm3.bz2 successfully downloaded. 343s ok 343s INFO:memProf:Time: 4.672s RAM: 0.000 Mb fabio.test.codecs.test_dm3image.TestDm3Image.test_read 343s test_read (fabio.test.codecs.test_mrcimage.TestMrc.test_read) 343s check we can read mrc images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.map.bz2') 343s INFO:fabio.utils.ExternalResources:Image EMD-3001.map.bz2 successfully downloaded. 343s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.mrc.bz2') 344s INFO:fabio.utils.ExternalResources:Image 0p67_5s_0000.mrc.bz2 successfully downloaded. 360s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.npy.bz2') 360s INFO:fabio.utils.ExternalResources:Image EMD-3001.npy.bz2 successfully downloaded. 360s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.npy.bz2') 361s INFO:fabio.utils.ExternalResources:Image 0p67_5s_0000.npy.bz2 successfully downloaded. 378s INFO:fabio.mrcimage:Expected 'MAP ', got INFO:fabio.mrcimage:Expected 'MAP ', got INFO:fabio.mrcimage:Expected 'MAP ', got ok 378s INFO:memProf:Time: 35.513s RAM: 0.000 Mb fabio.test.codecs.test_mrcimage.TestMrc.test_read 378s test_same (fabio.test.codecs.test_mrcimage.TestMrc.test_same) 378s see if we can read mrc images and if they are the same as the numpy dump ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.map.bz2') 378s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.mrc.bz2') 378s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.npy.bz2') 378s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.npy.bz2') 378s INFO:fabio.test.codecs.test_mrcimage:Comparing files EMD-3001.map and EMD-3001.npy 378s INFO:fabio.mrcimage:Expected 'MAP ', got INFO:fabio.test.codecs.test_mrcimage:Comparing files 0p67_5s_0000.mrc and 0p67_5s_0000.npy 378s ok 378s INFO:memProf:Time: 0.011s RAM: 0.000 Mb fabio.test.codecs.test_mrcimage.TestMrc.test_same 378s test_file_series (fabio.test.codecs.test_pixiimage.TestPixiImage.test_file_series) ... ok 378s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_file_series 378s test_frames_abort_iteration (fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_abort_iteration) ... ok 378s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_abort_iteration 378s test_frames_full_iteration (fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_full_iteration) ... ok 378s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_full_iteration 378s test_frames_random_access (fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_random_access) ... ok 378s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_random_access 378s test_multi_frame (fabio.test.codecs.test_pixiimage.TestPixiImage.test_multi_frame) ... ok 378s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_multi_frame 378s test_single_frame (fabio.test.codecs.test_pixiimage.TestPixiImage.test_single_frame) ... ok 378s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_single_frame 378s test_data (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_data) ... INFO:fabio.esperantoimage:Esperanto accepts only integer data, rounding 378s INFO:fabio.esperantoimage:Padding image to be square, multiple of 4 and of size between 256 and 4096 378s ok 378s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_data 378s test_header (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('sucrose_1s__1_1.esperanto.bz2') 379s INFO:fabio.utils.ExternalResources:Image sucrose_1s__1_1.esperanto.bz2 successfully downloaded. 380s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_ot6j5z9g_ubuntu/4bytes_long.esperanto 380s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_ot6j5z9g_ubuntu/agi_bitfield.esperanto 381s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.esperanto.bz2') 382s INFO:fabio.utils.ExternalResources:Image reference.esperanto.bz2 successfully downloaded. 382s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_ot6j5z9g_ubuntu/4bytes_long.esperanto 382s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_ot6j5z9g_ubuntu/agi_bitfield.esperanto 382s ok 382s INFO:memProf:Time: 3.563s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_header 382s test_read (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_read) 382s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('sucrose_1s__1_1.esperanto.bz2') 383s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.esperanto.bz2') 383s ok 383s INFO:memProf:Time: 1.137s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_read 383s test_values (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_values) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.esperanto.bz2') 383s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.npy.bz2') 383s INFO:fabio.utils.ExternalResources:Image reference.npy.bz2 successfully downloaded. 383s ok 383s INFO:memProf:Time: 0.487s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_values 383s test_frames_abort_iteration (fabio.test.codecs.test_limaimage.TestLima.test_frames_abort_iteration) ... ok 383s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_frames_abort_iteration 383s test_frames_full_iteration (fabio.test.codecs.test_limaimage.TestLima.test_frames_full_iteration) ... ok 383s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_frames_full_iteration 383s test_frames_random_access (fabio.test.codecs.test_limaimage.TestLima.test_frames_random_access) ... ok 383s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_frames_random_access 383s test_identify (fabio.test.codecs.test_limaimage.TestLima.test_identify) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('output_sparse_0_00000.h5') 384s INFO:fabio.utils.ExternalResources:Image output_sparse_0_00000.h5.bz2 successfully downloaded. 386s ok 386s INFO:memProf:Time: 2.438s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_identify 386s test_open (fabio.test.codecs.test_limaimage.TestLima.test_open) 386s test_open check we can read images from Lima ... ok 386s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_open 386s test_read (fabio.test.codecs.test_limaimage.TestLima.test_read) 386s test_read check we can read images from Lima ... ok 386s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_read 386s test_write (fabio.test.codecs.test_limaimage.TestLima.test_write) ... WARNING:fabio.limaimage:hdf5plugin is needed for bitshuffle-LZ4 compression, falling back on gzip (slower) 386s ok 386s INFO:memProf:Time: 0.010s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_write 386s test_read (fabio.test.codecs.test_hipicimage.TestHiPiCImage.test_read) 386s check we can read dm3 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Radiograph_SP8_BL47XU_HiPicimage.img.bz2') 387s INFO:fabio.utils.ExternalResources:Image Radiograph_SP8_BL47XU_HiPicimage.img.bz2 successfully downloaded. 388s ok 388s INFO:memProf:Time: 2.511s RAM: 0.000 Mb fabio.test.codecs.test_hipicimage.TestHiPiCImage.test_read 388s test_read (fabio.test.codecs.test_binaryimage.TestBinaryImage.test_read) 388s check we can read images from Eiger ... ok 388s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_binaryimage.TestBinaryImage.test_read 388s test_write (fabio.test.codecs.test_binaryimage.TestBinaryImage.test_write) ... ok 388s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_binaryimage.TestBinaryImage.test_write 388s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0001.ccd') 388s INFO:fabio.utils.ExternalResources:Image scan0001.ccd.bz2 successfully downloaded. 388s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0005.ccd') 389s INFO:fabio.utils.ExternalResources:Image scan0005.ccd.bz2 successfully downloaded. 389s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0050.ccd') 389s INFO:fabio.utils.ExternalResources:Image scan0050.ccd.bz2 successfully downloaded. 389s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0059.ccd') 389s INFO:fabio.utils.ExternalResources:Image scan0059.ccd.bz2 successfully downloaded. 389s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0066.ccd') 389s INFO:fabio.utils.ExternalResources:Image scan0066.ccd.bz2 successfully downloaded. 389s test_parse (fabio.test.codecs.test_xcaliburimage.TestCcdCharacteristiscs.test_parse) ... ok 389s INFO:memProf:Time: 0.008s RAM: 0.000 Mb fabio.test.codecs.test_xcaliburimage.TestCcdCharacteristiscs.test_parse 389s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.cbf') 389s test_decomposition (fabio.test.codecs.test_xcaliburimage.testXcalibureImage.test_decomposition) ... WARNING:fabio.test.codecs.test_xcaliburimage:PyFAI not available: only a coarse description of the mask is provided 389s WARNING:fabio.xcaliburimage:PyFAI not available: only a coarse description of the mask is provided 389s ok 389s INFO:memProf:Time: 0.007s RAM: 0.000 Mb fabio.test.codecs.test_xcaliburimage.testXcalibureImage.test_decomposition 389s test_compress_decode_field_overflow (fabio.test.test_agi_bitfield.TestUtil.test_compress_decode_field_overflow) ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_compress_decode_field_overflow 389s test_compress_decompress_field_small (fabio.test.test_agi_bitfield.TestUtil.test_compress_decompress_field_small) ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_compress_decompress_field_small 389s test_full_compress_decompress_field (fabio.test.test_agi_bitfield.TestUtil.test_full_compress_decompress_field) ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_full_compress_decompress_field 389s test_get_fieldsize (fabio.test.test_agi_bitfield.TestUtil.test_get_fieldsize) ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_get_fieldsize 389s test_mask_conv (fabio.test.test_agi_bitfield.TestUtil.test_mask_conv) ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_mask_conv 389s test_compress_row_small (fabio.test.test_agi_bitfield.TestRow.test_compress_row_small) ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestRow.test_compress_row_small 389s test_compress_row_zero (fabio.test.test_agi_bitfield.TestRow.test_compress_row_zero) ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestRow.test_compress_row_zero 389s test_full_rand (fabio.test.test_agi_bitfield.TestCompression.test_full_rand) ... ok 389s INFO:memProf:Time: 0.048s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestCompression.test_full_rand 389s test_cython (fabio.test.test_densification.TestDensification.test_cython) ... ok 389s INFO:memProf:Time: 0.060s RAM: 0.000 Mb fabio.test.test_densification.TestDensification.test_cython 389s test_rng_normal (fabio.test.test_densification.TestDensification.test_rng_normal) ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_densification.TestDensification.test_rng_normal 389s test_rng_uniform (fabio.test.test_densification.TestDensification.test_rng_uniform) ... ok 389s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_densification.TestDensification.test_rng_uniform 389s setUpClass (fabio.test.test_io_limits.TestEdf) ... skipped 'test requires debug level logging' 389s setUpClass (fabio.test.test_io_limits.TestTiff) ... skipped 'test requires debug level logging' 389s test_coverage (fabio.test.test_utils_cli.TestUtilShell.test_coverage) 389s test function coverage 389s /tmp/fabio_ot6j5z9g_ubuntu/lima3d.h5 389s /tmp/fabio_ot6j5z9g_ubuntu/binary.npy 389s speed-up: 20.789349622833114 389s ##### 0 389s ##### 1 389s ##### 2 389s ##### 3 389s ##### 4 389s ##### 5 389s ##### 6 389s ##### 7 389s aaa [ ] 7% toto ... ok 389s aaa [■■■■■■ ] 70% toto aaa [■■■■■■■■■■] 132% toto INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_utils_cli.TestUtilShell.test_coverage 389s test_expand_args (fabio.test.test_utils_cli.TestUtilShell.test_expand_args) ... ok 389s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_utils_cli.TestUtilShell.test_expand_args 389s 389s ---------------------------------------------------------------------- 389s Ran 356 tests in 268.874s 389s 389s OK (skipped=7) 390s autopkgtest [09:28:43]: test command1: -----------------------] 391s autopkgtest [09:28:44]: test command1: - - - - - - - - - - results - - - - - - - - - - 391s command1 PASS 391s autopkgtest [09:28:44]: @@@@@@@@@@@@@@@@@@@@ summary 391s command1 PASS 402s nova [W] Skipping flock for amd64 402s Creating nova instance adt-plucky-amd64-python-fabio-20241115-092213-juju-7f2275-prod-proposed-migration-environment-20-4a223b5b-5673-4738-86a1-f56a63f7d1e9 from image adt/ubuntu-plucky-amd64-server-20241114.img (UUID 79d80331-8736-463c-82c6-8c9e13c0a4ca)...