0s autopkgtest [11:34:34]: starting date and time: 2025-02-19 11:34:34+0000 0s autopkgtest [11:34:34]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [11:34:34]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ghtrg_hw/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:sphinx --apt-upgrade nipy --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=sphinx/8.1.3-5 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-12.secgroup --name adt-plucky-amd64-nipy-20250219-113434-juju-7f2275-prod-proposed-migration-environment-2-b2b97c88-b786-4971-850e-c31f04b56768 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 207s autopkgtest [11:38:01]: testbed dpkg architecture: amd64 207s autopkgtest [11:38:01]: testbed apt version: 2.9.29 207s autopkgtest [11:38:01]: @@@@@@@@@@@@@@@@@@@@ test bed setup 208s autopkgtest [11:38:02]: testbed release detected to be: None 208s autopkgtest [11:38:02]: updating testbed package index (apt update) 209s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [110 kB] 209s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 209s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 209s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 209s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.1 kB] 209s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [13.9 kB] 209s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [3120 B] 209s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [750 kB] 209s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [81.8 kB] 209s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [101 kB] 209s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [7984 B] 209s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/restricted i386 Packages [2412 B] 209s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [697 kB] 210s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [265 kB] 210s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [11.5 kB] 210s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [3128 B] 210s Fetched 2124 kB in 1s (2172 kB/s) 211s Reading package lists... 211s Reading package lists... 211s Building dependency tree... 211s Reading state information... 212s Calculating upgrade... 212s The following NEW packages will be installed: 212s libapt-pkg7.0 212s The following packages will be upgraded: 212s apt apt-utils iproute2 liblsof0 libp11-kit0 lsof rsyslog 212s 7 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 212s Need to get 5234 kB of archives. 212s After this operation, 4074 kB of additional disk space will be used. 212s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libapt-pkg7.0 amd64 2.9.30 [1131 kB] 212s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 apt amd64 2.9.30 [1434 kB] 213s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 apt-utils amd64 2.9.30 [222 kB] 213s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 iproute2 amd64 6.13.0-1ubuntu1 [1277 kB] 213s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libp11-kit0 amd64 0.25.5-2ubuntu3 [311 kB] 213s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 rsyslog amd64 8.2412.0-2ubuntu1 [555 kB] 213s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 lsof amd64 4.99.4+dfsg-1 [245 kB] 213s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsof0 amd64 4.99.4+dfsg-1 [59.6 kB] 213s Preconfiguring packages ... 213s Fetched 5234 kB in 1s (6494 kB/s) 213s Selecting previously unselected package libapt-pkg7.0:amd64. 213s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108925 files and directories currently installed.) 213s Preparing to unpack .../libapt-pkg7.0_2.9.30_amd64.deb ... 213s Unpacking libapt-pkg7.0:amd64 (2.9.30) ... 213s Setting up libapt-pkg7.0:amd64 (2.9.30) ... 213s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108974 files and directories currently installed.) 213s Preparing to unpack .../archives/apt_2.9.30_amd64.deb ... 214s Unpacking apt (2.9.30) over (2.9.29) ... 214s Setting up apt (2.9.30) ... 214s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108974 files and directories currently installed.) 214s Preparing to unpack .../0-apt-utils_2.9.30_amd64.deb ... 214s Unpacking apt-utils (2.9.30) over (2.9.29) ... 214s Preparing to unpack .../1-iproute2_6.13.0-1ubuntu1_amd64.deb ... 215s Unpacking iproute2 (6.13.0-1ubuntu1) over (6.10.0-2ubuntu1) ... 215s Preparing to unpack .../2-libp11-kit0_0.25.5-2ubuntu3_amd64.deb ... 215s Unpacking libp11-kit0:amd64 (0.25.5-2ubuntu3) over (0.25.5-2ubuntu2) ... 215s Preparing to unpack .../3-rsyslog_8.2412.0-2ubuntu1_amd64.deb ... 215s Unpacking rsyslog (8.2412.0-2ubuntu1) over (8.2412.0-1ubuntu1) ... 215s Preparing to unpack .../4-lsof_4.99.4+dfsg-1_amd64.deb ... 215s Unpacking lsof (4.99.4+dfsg-1) over (4.99.3+dfsg-2) ... 215s Preparing to unpack .../5-liblsof0_4.99.4+dfsg-1_amd64.deb ... 215s Unpacking liblsof0 (4.99.4+dfsg-1) over (4.99.3+dfsg-2) ... 215s Setting up apt-utils (2.9.30) ... 215s Setting up liblsof0 (4.99.4+dfsg-1) ... 215s Setting up iproute2 (6.13.0-1ubuntu1) ... 215s Setting up rsyslog (8.2412.0-2ubuntu1) ... 215s info: The user `syslog' is already a member of `adm'. 216s Setting up libp11-kit0:amd64 (0.25.5-2ubuntu3) ... 216s Setting up lsof (4.99.4+dfsg-1) ... 216s Processing triggers for man-db (2.13.0-1) ... 218s Processing triggers for libc-bin (2.40-4ubuntu1) ... 219s Reading package lists... 219s Building dependency tree... 219s Reading state information... 219s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 219s autopkgtest [11:38:13]: upgrading testbed (apt dist-upgrade and autopurge) 220s Reading package lists... 220s Building dependency tree... 220s Reading state information... 220s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 220s Starting 2 pkgProblemResolver with broken count: 0 220s Done 221s Entering ResolveByKeep 221s 221s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 221s Reading package lists... 222s Building dependency tree... 222s Reading state information... 222s Starting pkgProblemResolver with broken count: 0 222s Starting 2 pkgProblemResolver with broken count: 0 222s Done 223s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 223s autopkgtest [11:38:17]: rebooting testbed after setup commands that affected boot 246s autopkgtest [11:38:40]: testbed running kernel: Linux 6.12.0-15-generic #15-Ubuntu SMP PREEMPT_DYNAMIC Tue Feb 4 16:02:16 UTC 2025 249s autopkgtest [11:38:43]: @@@@@@@@@@@@@@@@@@@@ apt-source nipy 253s Get:1 http://ftpmaster.internal/ubuntu plucky/universe nipy 0.6.1-1build2 (dsc) [2509 B] 253s Get:2 http://ftpmaster.internal/ubuntu plucky/universe nipy 0.6.1-1build2 (tar) [1653 kB] 253s Get:3 http://ftpmaster.internal/ubuntu plucky/universe nipy 0.6.1-1build2 (diff) [12.5 kB] 253s gpgv: Signature made Wed Jan 29 22:33:34 2025 UTC 253s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 253s gpgv: Can't check signature: No public key 253s dpkg-source: warning: cannot verify inline signature for ./nipy_0.6.1-1build2.dsc: no acceptable signature found 253s autopkgtest [11:38:47]: testing package nipy version 0.6.1-1build2 254s autopkgtest [11:38:48]: build not needed 255s autopkgtest [11:38:49]: test command1: preparing testbed 255s Reading package lists... 255s Building dependency tree... 255s Reading state information... 255s Starting pkgProblemResolver with broken count: 0 255s Starting 2 pkgProblemResolver with broken count: 0 255s Done 256s The following NEW packages will be installed: 256s fonts-mathjax libblas3 libgfortran5 libjs-jquery libjs-mathjax 256s libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 python-nipy-doc 256s python3-decorator python3-iniconfig python3-mpmath python3-nibabel 256s python3-nipy python3-nipy-lib python3-numpy python3-packaging python3-pluggy 256s python3-pytest python3-scipy python3-sympy python3-transforms3d 256s 0 upgraded, 23 newly installed, 0 to remove and 0 not upgraded. 256s Need to get 53.4 MB of archives. 256s After this operation, 284 MB of additional disk space will be used. 256s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 256s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 256s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 15-20250213-1ubuntu1 [920 kB] 256s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 256s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 256s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libjs-sphinxdoc all 8.1.3-5 [31.0 kB] 256s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 257s Get:8 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblbfgsb0 amd64 3.0+dfsg.4-1build1 [29.9 kB] 257s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-decorator all 5.1.1-5 [10.1 kB] 257s Get:10 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-iniconfig all 1.1.1-2 [6024 B] 257s Get:11 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-mpmath all 1.3.0-1 [425 kB] 257s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-numpy amd64 1:1.26.4+ds-13 [5319 kB] 257s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-packaging all 24.2-1 [51.5 kB] 257s Get:14 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-scipy amd64 1.14.1-4ubuntu1 [22.3 MB] 257s Get:15 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-nibabel all 5.3.2-2 [2701 kB] 257s Get:16 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-sympy all 1.13.3-1 [4228 kB] 258s Get:17 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-transforms3d all 0.4.2+ds-1 [1359 kB] 258s Get:18 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-nipy-lib amd64 0.6.1-1build2 [1216 kB] 258s Get:19 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-nipy all 0.6.1-1build2 [727 kB] 258s Get:20 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pluggy all 1.5.0-1 [21.0 kB] 258s Get:21 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pytest all 8.3.4-1 [252 kB] 258s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 258s Get:23 http://ftpmaster.internal/ubuntu plucky/universe amd64 python-nipy-doc all 0.6.1-1build2 [1970 kB] 258s Fetched 53.4 MB in 2s (24.5 MB/s) 258s Selecting previously unselected package fonts-mathjax. 258s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108975 files and directories currently installed.) 258s Preparing to unpack .../00-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 258s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 259s Selecting previously unselected package libblas3:amd64. 259s Preparing to unpack .../01-libblas3_3.12.1-2_amd64.deb ... 259s Unpacking libblas3:amd64 (3.12.1-2) ... 259s Selecting previously unselected package libgfortran5:amd64. 259s Preparing to unpack .../02-libgfortran5_15-20250213-1ubuntu1_amd64.deb ... 259s Unpacking libgfortran5:amd64 (15-20250213-1ubuntu1) ... 259s Selecting previously unselected package libjs-jquery. 259s Preparing to unpack .../03-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 259s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 259s Selecting previously unselected package libjs-underscore. 259s Preparing to unpack .../04-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 259s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 259s Selecting previously unselected package libjs-sphinxdoc. 259s Preparing to unpack .../05-libjs-sphinxdoc_8.1.3-5_all.deb ... 259s Unpacking libjs-sphinxdoc (8.1.3-5) ... 259s Selecting previously unselected package liblapack3:amd64. 259s Preparing to unpack .../06-liblapack3_3.12.1-2_amd64.deb ... 259s Unpacking liblapack3:amd64 (3.12.1-2) ... 259s Selecting previously unselected package liblbfgsb0:amd64. 259s Preparing to unpack .../07-liblbfgsb0_3.0+dfsg.4-1build1_amd64.deb ... 259s Unpacking liblbfgsb0:amd64 (3.0+dfsg.4-1build1) ... 259s Selecting previously unselected package python3-decorator. 259s Preparing to unpack .../08-python3-decorator_5.1.1-5_all.deb ... 259s Unpacking python3-decorator (5.1.1-5) ... 259s Selecting previously unselected package python3-iniconfig. 259s Preparing to unpack .../09-python3-iniconfig_1.1.1-2_all.deb ... 259s Unpacking python3-iniconfig (1.1.1-2) ... 259s Selecting previously unselected package python3-mpmath. 259s Preparing to unpack .../10-python3-mpmath_1.3.0-1_all.deb ... 259s Unpacking python3-mpmath (1.3.0-1) ... 259s Selecting previously unselected package python3-numpy. 259s Preparing to unpack .../11-python3-numpy_1%3a1.26.4+ds-13_amd64.deb ... 259s Unpacking python3-numpy (1:1.26.4+ds-13) ... 259s Selecting previously unselected package python3-packaging. 259s Preparing to unpack .../12-python3-packaging_24.2-1_all.deb ... 259s Unpacking python3-packaging (24.2-1) ... 259s Selecting previously unselected package python3-scipy. 259s Preparing to unpack .../13-python3-scipy_1.14.1-4ubuntu1_amd64.deb ... 259s Unpacking python3-scipy (1.14.1-4ubuntu1) ... 260s Selecting previously unselected package python3-nibabel. 260s Preparing to unpack .../14-python3-nibabel_5.3.2-2_all.deb ... 260s Unpacking python3-nibabel (5.3.2-2) ... 260s Selecting previously unselected package python3-sympy. 260s Preparing to unpack .../15-python3-sympy_1.13.3-1_all.deb ... 260s Unpacking python3-sympy (1.13.3-1) ... 260s Selecting previously unselected package python3-transforms3d. 260s Preparing to unpack .../16-python3-transforms3d_0.4.2+ds-1_all.deb ... 260s Unpacking python3-transforms3d (0.4.2+ds-1) ... 260s Selecting previously unselected package python3-nipy-lib:amd64. 260s Preparing to unpack .../17-python3-nipy-lib_0.6.1-1build2_amd64.deb ... 260s Unpacking python3-nipy-lib:amd64 (0.6.1-1build2) ... 261s Selecting previously unselected package python3-nipy. 261s Preparing to unpack .../18-python3-nipy_0.6.1-1build2_all.deb ... 261s Unpacking python3-nipy (0.6.1-1build2) ... 261s Selecting previously unselected package python3-pluggy. 261s Preparing to unpack .../19-python3-pluggy_1.5.0-1_all.deb ... 261s Unpacking python3-pluggy (1.5.0-1) ... 261s Selecting previously unselected package python3-pytest. 261s Preparing to unpack .../20-python3-pytest_8.3.4-1_all.deb ... 261s Unpacking python3-pytest (8.3.4-1) ... 261s Selecting previously unselected package libjs-mathjax. 261s Preparing to unpack .../21-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 261s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 261s Selecting previously unselected package python-nipy-doc. 261s Preparing to unpack .../22-python-nipy-doc_0.6.1-1build2_all.deb ... 261s Unpacking python-nipy-doc (0.6.1-1build2) ... 262s Setting up python3-iniconfig (1.1.1-2) ... 262s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 262s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 262s Setting up python3-decorator (5.1.1-5) ... 262s Setting up libblas3:amd64 (3.12.1-2) ... 262s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 262s Setting up python3-packaging (24.2-1) ... 262s Setting up libgfortran5:amd64 (15-20250213-1ubuntu1) ... 262s Setting up python3-pluggy (1.5.0-1) ... 262s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 262s Setting up python3-mpmath (1.3.0-1) ... 262s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 262s Setting up python3-sympy (1.13.3-1) ... 267s Setting up liblapack3:amd64 (3.12.1-2) ... 267s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 267s Setting up python3-pytest (8.3.4-1) ... 268s Setting up python3-numpy (1:1.26.4+ds-13) ... 269s Setting up libjs-sphinxdoc (8.1.3-5) ... 269s Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1build1) ... 269s Setting up python3-transforms3d (0.4.2+ds-1) ... 269s Setting up python3-scipy (1.14.1-4ubuntu1) ... 272s Setting up python-nipy-doc (0.6.1-1build2) ... 272s Setting up python3-nibabel (5.3.2-2) ... 272s Setting up python3-nipy-lib:amd64 (0.6.1-1build2) ... 272s Setting up python3-nipy (0.6.1-1build2) ... 273s Processing triggers for man-db (2.13.0-1) ... 274s Processing triggers for libc-bin (2.40-4ubuntu1) ... 275s autopkgtest [11:39:09]: test command1: cd debian/tests && python3 -m pytest nipy_test.py 275s autopkgtest [11:39:09]: test command1: [----------------------- 276s ============================= test session starts ============================== 276s platform linux -- Python 3.13.2, pytest-8.3.4, pluggy-1.5.0 276s rootdir: /tmp/autopkgtest.UFIf4z/build.Lfh/src 276s configfile: pyproject.toml 276s plugins: typeguard-4.4.1 276s collected 4 items 276s 276s nipy_test.py .... [100%] 276s 276s =============================== warnings summary =============================== 276s debian/tests/nipy_test.py::test_image_save_to_file 276s /usr/lib/python3/dist-packages/nipy/io/files.py:141: FutureWarning: Default `strict` currently False; this will change to True in a future version of nipy 276s ni_img = nipy2nifti(img, data_dtype = io_dtype) 276s 276s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 276s ========================= 4 passed, 1 warning in 0.15s ========================= 276s autopkgtest [11:39:10]: test command1: -----------------------] 277s autopkgtest [11:39:11]: test command1: - - - - - - - - - - results - - - - - - - - - - 277s command1 PASS 277s autopkgtest [11:39:11]: test autodep8-python3: preparing testbed 614s autopkgtest [11:44:48]: testbed dpkg architecture: amd64 614s autopkgtest [11:44:48]: testbed apt version: 2.9.29 615s autopkgtest [11:44:49]: @@@@@@@@@@@@@@@@@@@@ test bed setup 615s autopkgtest [11:44:49]: testbed release detected to be: plucky 616s autopkgtest [11:44:50]: updating testbed package index (apt update) 616s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [110 kB] 616s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 616s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 617s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 617s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [13.9 kB] 617s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.1 kB] 617s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [750 kB] 617s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [3120 B] 617s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [101 kB] 617s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [81.8 kB] 617s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted i386 Packages [2412 B] 617s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [7984 B] 617s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [265 kB] 617s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [697 kB] 617s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [3128 B] 617s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [11.5 kB] 617s Fetched 2124 kB in 1s (1749 kB/s) 618s Reading package lists... 619s Reading package lists... 619s Building dependency tree... 619s Reading state information... 620s Calculating upgrade... 620s The following NEW packages will be installed: 620s libapt-pkg7.0 620s The following packages will be upgraded: 620s apt apt-utils iproute2 liblsof0 libp11-kit0 lsof rsyslog 620s 7 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 620s Need to get 5234 kB of archives. 620s After this operation, 4074 kB of additional disk space will be used. 620s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libapt-pkg7.0 amd64 2.9.30 [1131 kB] 620s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 apt amd64 2.9.30 [1434 kB] 621s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 apt-utils amd64 2.9.30 [222 kB] 621s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 iproute2 amd64 6.13.0-1ubuntu1 [1277 kB] 621s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libp11-kit0 amd64 0.25.5-2ubuntu3 [311 kB] 621s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 rsyslog amd64 8.2412.0-2ubuntu1 [555 kB] 621s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 lsof amd64 4.99.4+dfsg-1 [245 kB] 621s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsof0 amd64 4.99.4+dfsg-1 [59.6 kB] 621s Preconfiguring packages ... 621s Fetched 5234 kB in 1s (6123 kB/s) 621s Selecting previously unselected package libapt-pkg7.0:amd64. 621s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108925 files and directories currently installed.) 621s Preparing to unpack .../libapt-pkg7.0_2.9.30_amd64.deb ... 621s Unpacking libapt-pkg7.0:amd64 (2.9.30) ... 621s Setting up libapt-pkg7.0:amd64 (2.9.30) ... 622s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108974 files and directories currently installed.) 622s Preparing to unpack .../archives/apt_2.9.30_amd64.deb ... 622s Unpacking apt (2.9.30) over (2.9.29) ... 622s Setting up apt (2.9.30) ... 622s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108974 files and directories currently installed.) 622s Preparing to unpack .../0-apt-utils_2.9.30_amd64.deb ... 622s Unpacking apt-utils (2.9.30) over (2.9.29) ... 623s Preparing to unpack .../1-iproute2_6.13.0-1ubuntu1_amd64.deb ... 623s Unpacking iproute2 (6.13.0-1ubuntu1) over (6.10.0-2ubuntu1) ... 623s Preparing to unpack .../2-libp11-kit0_0.25.5-2ubuntu3_amd64.deb ... 623s Unpacking libp11-kit0:amd64 (0.25.5-2ubuntu3) over (0.25.5-2ubuntu2) ... 623s Preparing to unpack .../3-rsyslog_8.2412.0-2ubuntu1_amd64.deb ... 623s Unpacking rsyslog (8.2412.0-2ubuntu1) over (8.2412.0-1ubuntu1) ... 623s Preparing to unpack .../4-lsof_4.99.4+dfsg-1_amd64.deb ... 623s Unpacking lsof (4.99.4+dfsg-1) over (4.99.3+dfsg-2) ... 623s Preparing to unpack .../5-liblsof0_4.99.4+dfsg-1_amd64.deb ... 623s Unpacking liblsof0 (4.99.4+dfsg-1) over (4.99.3+dfsg-2) ... 623s Setting up apt-utils (2.9.30) ... 623s Setting up liblsof0 (4.99.4+dfsg-1) ... 623s Setting up iproute2 (6.13.0-1ubuntu1) ... 623s Setting up rsyslog (8.2412.0-2ubuntu1) ... 623s info: The user `syslog' is already a member of `adm'. 624s Setting up libp11-kit0:amd64 (0.25.5-2ubuntu3) ... 624s Setting up lsof (4.99.4+dfsg-1) ... 624s Processing triggers for man-db (2.13.0-1) ... 627s Processing triggers for libc-bin (2.40-4ubuntu1) ... 628s Reading package lists... 629s Building dependency tree... 629s Reading state information... 629s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 629s autopkgtest [11:45:03]: upgrading testbed (apt dist-upgrade and autopurge) 629s Reading package lists... 630s Building dependency tree... 630s Reading state information... 630s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 630s Starting 2 pkgProblemResolver with broken count: 0 630s Done 631s Entering ResolveByKeep 631s 631s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 632s Reading package lists... 632s Building dependency tree... 632s Reading state information... 632s Starting pkgProblemResolver with broken count: 0 632s Starting 2 pkgProblemResolver with broken count: 0 632s Done 633s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 633s autopkgtest [11:45:07]: rebooting testbed after setup commands that affected boot 660s Reading package lists... 660s Building dependency tree... 660s Reading state information... 661s Starting pkgProblemResolver with broken count: 0 661s Starting 2 pkgProblemResolver with broken count: 0 661s Done 661s The following NEW packages will be installed: 661s libblas3 libgfortran5 liblapack3 liblbfgsb0 python3-all python3-decorator 661s python3-mpmath python3-nibabel python3-nipy python3-nipy-lib python3-numpy 661s python3-packaging python3-scipy python3-sympy python3-transforms3d 661s python3.12 python3.12-minimal 662s 0 upgraded, 17 newly installed, 0 to remove and 0 not upgraded. 662s Need to get 45.8 MB of archives. 662s After this operation, 231 MB of additional disk space will be used. 662s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12-minimal amd64 3.12.9-1 [2348 kB] 662s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12 amd64 3.12.9-1 [671 kB] 662s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 662s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 15-20250213-1ubuntu1 [920 kB] 662s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 662s Get:6 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblbfgsb0 amd64 3.0+dfsg.4-1build1 [29.9 kB] 662s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-all amd64 3.13.1-1~exp2 [894 B] 662s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-decorator all 5.1.1-5 [10.1 kB] 662s Get:9 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-mpmath all 1.3.0-1 [425 kB] 662s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-numpy amd64 1:1.26.4+ds-13 [5319 kB] 663s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-packaging all 24.2-1 [51.5 kB] 663s Get:12 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-scipy amd64 1.14.1-4ubuntu1 [22.3 MB] 663s Get:13 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-nibabel all 5.3.2-2 [2701 kB] 663s Get:14 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-sympy all 1.13.3-1 [4228 kB] 663s Get:15 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-transforms3d all 0.4.2+ds-1 [1359 kB] 664s Get:16 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-nipy-lib amd64 0.6.1-1build2 [1216 kB] 664s Get:17 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-nipy all 0.6.1-1build2 [727 kB] 664s Fetched 45.8 MB in 2s (21.0 MB/s) 664s Selecting previously unselected package python3.12-minimal. 664s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 108975 files and directories currently installed.) 664s Preparing to unpack .../00-python3.12-minimal_3.12.9-1_amd64.deb ... 664s Unpacking python3.12-minimal (3.12.9-1) ... 664s Selecting previously unselected package python3.12. 664s Preparing to unpack .../01-python3.12_3.12.9-1_amd64.deb ... 664s Unpacking python3.12 (3.12.9-1) ... 664s Selecting previously unselected package libblas3:amd64. 664s Preparing to unpack .../02-libblas3_3.12.1-2_amd64.deb ... 664s Unpacking libblas3:amd64 (3.12.1-2) ... 664s Selecting previously unselected package libgfortran5:amd64. 664s Preparing to unpack .../03-libgfortran5_15-20250213-1ubuntu1_amd64.deb ... 664s Unpacking libgfortran5:amd64 (15-20250213-1ubuntu1) ... 665s Selecting previously unselected package liblapack3:amd64. 665s Preparing to unpack .../04-liblapack3_3.12.1-2_amd64.deb ... 665s Unpacking liblapack3:amd64 (3.12.1-2) ... 665s Selecting previously unselected package liblbfgsb0:amd64. 665s Preparing to unpack .../05-liblbfgsb0_3.0+dfsg.4-1build1_amd64.deb ... 665s Unpacking liblbfgsb0:amd64 (3.0+dfsg.4-1build1) ... 665s Selecting previously unselected package python3-all. 665s Preparing to unpack .../06-python3-all_3.13.1-1~exp2_amd64.deb ... 665s Unpacking python3-all (3.13.1-1~exp2) ... 665s Selecting previously unselected package python3-decorator. 665s Preparing to unpack .../07-python3-decorator_5.1.1-5_all.deb ... 665s Unpacking python3-decorator (5.1.1-5) ... 665s Selecting previously unselected package python3-mpmath. 665s Preparing to unpack .../08-python3-mpmath_1.3.0-1_all.deb ... 665s Unpacking python3-mpmath (1.3.0-1) ... 665s Selecting previously unselected package python3-numpy. 665s Preparing to unpack .../09-python3-numpy_1%3a1.26.4+ds-13_amd64.deb ... 665s Unpacking python3-numpy (1:1.26.4+ds-13) ... 665s Selecting previously unselected package python3-packaging. 665s Preparing to unpack .../10-python3-packaging_24.2-1_all.deb ... 665s Unpacking python3-packaging (24.2-1) ... 665s Selecting previously unselected package python3-scipy. 665s Preparing to unpack .../11-python3-scipy_1.14.1-4ubuntu1_amd64.deb ... 665s Unpacking python3-scipy (1.14.1-4ubuntu1) ... 666s Selecting previously unselected package python3-nibabel. 666s Preparing to unpack .../12-python3-nibabel_5.3.2-2_all.deb ... 666s Unpacking python3-nibabel (5.3.2-2) ... 666s Selecting previously unselected package python3-sympy. 666s Preparing to unpack .../13-python3-sympy_1.13.3-1_all.deb ... 666s Unpacking python3-sympy (1.13.3-1) ... 666s Selecting previously unselected package python3-transforms3d. 666s Preparing to unpack .../14-python3-transforms3d_0.4.2+ds-1_all.deb ... 666s Unpacking python3-transforms3d (0.4.2+ds-1) ... 666s Selecting previously unselected package python3-nipy-lib:amd64. 666s Preparing to unpack .../15-python3-nipy-lib_0.6.1-1build2_amd64.deb ... 666s Unpacking python3-nipy-lib:amd64 (0.6.1-1build2) ... 666s Selecting previously unselected package python3-nipy. 666s Preparing to unpack .../16-python3-nipy_0.6.1-1build2_all.deb ... 666s Unpacking python3-nipy (0.6.1-1build2) ... 666s Setting up python3.12-minimal (3.12.9-1) ... 667s Setting up python3.12 (3.12.9-1) ... 668s Setting up python3-all (3.13.1-1~exp2) ... 668s Setting up python3-decorator (5.1.1-5) ... 669s Setting up libblas3:amd64 (3.12.1-2) ... 669s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 669s Setting up python3-packaging (24.2-1) ... 669s Setting up libgfortran5:amd64 (15-20250213-1ubuntu1) ... 669s Setting up python3-mpmath (1.3.0-1) ... 670s Setting up python3-sympy (1.13.3-1) ... 681s Setting up liblapack3:amd64 (3.12.1-2) ... 681s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 681s Setting up python3-numpy (1:1.26.4+ds-13) ... 684s Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1build1) ... 684s Setting up python3-transforms3d (0.4.2+ds-1) ... 684s Setting up python3-scipy (1.14.1-4ubuntu1) ... 691s Setting up python3-nibabel (5.3.2-2) ... 692s Setting up python3-nipy-lib:amd64 (0.6.1-1build2) ... 692s Setting up python3-nipy (0.6.1-1build2) ... 693s Processing triggers for systemd (257.2-3ubuntu1) ... 693s Processing triggers for man-db (2.13.0-1) ... 694s Processing triggers for libc-bin (2.40-4ubuntu1) ... 697s autopkgtest [11:46:11]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import nipy; print(nipy)" ; done 697s autopkgtest [11:46:11]: test autodep8-python3: [----------------------- 698s Testing with python3.12: 698s 698s Testing with python3.13: 698s 699s autopkgtest [11:46:13]: test autodep8-python3: -----------------------] 699s autodep8-python3 PASS (superficial) 699s autopkgtest [11:46:13]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 700s autopkgtest [11:46:14]: @@@@@@@@@@@@@@@@@@@@ summary 700s command1 PASS 700s autodep8-python3 PASS (superficial) 718s nova [W] Skipping flock for amd64 718s Creating nova instance adt-plucky-amd64-nipy-20250219-113434-juju-7f2275-prod-proposed-migration-environment-2-b2b97c88-b786-4971-850e-c31f04b56768 from image adt/ubuntu-plucky-amd64-server-20250219.img (UUID 90711abf-916f-4a80-845a-825250a78697)... 718s nova [W] Timed out waiting for 7debcfc6-0c23-4ff8-881d-5b9bd53c3f24 to get deleted. 718s nova [W] Skipping flock for amd64 718s Creating nova instance adt-plucky-amd64-nipy-20250219-113434-juju-7f2275-prod-proposed-migration-environment-2-b2b97c88-b786-4971-850e-c31f04b56768 from image adt/ubuntu-plucky-amd64-server-20250219.img (UUID 90711abf-916f-4a80-845a-825250a78697)... 718s nova [W] Timed out waiting for 9794e9a0-677d-4f03-ac00-d2c86d529cfd to get deleted.