0s autopkgtest [01:16:47]: starting date and time: 2025-03-16 01:16:47+0000
  0s autopkgtest [01:16:47]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
  0s autopkgtest [01:16:47]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.0zkf7t84/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:libpng1.6 --apt-upgrade ncbi-tools6 --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=libpng1.6/1.6.47-1.1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-29.secgroup --name adt-plucky-amd64-ncbi-tools6-20250316-011647-juju-7f2275-prod-proposed-migration-environment-15-84228cd6-2875-4100-a4c5-0a000e7369f8 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
371s autopkgtest [01:22:58]: testbed dpkg architecture: amd64
377s autopkgtest [01:23:04]: testbed apt version: 2.9.31ubuntu1
385s autopkgtest [01:23:12]: @@@@@@@@@@@@@@@@@@@@ test bed setup
386s autopkgtest [01:23:13]: testbed release detected to be: None
391s autopkgtest [01:23:17]: updating testbed package index (apt update)
391s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB]
391s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
391s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
391s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
391s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [365 kB]
391s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [41.4 kB]
391s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [17.7 kB]
391s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [84.0 kB]
391s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [66.6 kB]
391s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 c-n-f Metadata [1844 B]
391s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 c-n-f Metadata [116 B]
391s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [168 kB]
391s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [338 kB]
392s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 c-n-f Metadata [14.9 kB]
392s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [9324 B]
392s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [18.0 kB]
392s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 c-n-f Metadata [628 B]
392s Fetched 1252 kB in 2s (830 kB/s)
393s Reading package lists...
394s + lsb_release --codename --short
394s + RELEASE=plucky
394s + cat
394s + [ plucky != trusty ]
394s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade
394s Reading package lists...
395s Building dependency tree...
395s Reading state information...
395s Calculating upgrade...
395s Calculating upgrade...
395s The following package was automatically installed and is no longer required:
395s   libnl-genl-3-200
395s Use 'sudo apt autoremove' to remove it.
395s The following NEW packages will be installed:
395s   bpftool libdebuginfod-common libdebuginfod1t64 linux-headers-6.14.0-10
395s   linux-headers-6.14.0-10-generic linux-image-6.14.0-10-generic
395s   linux-modules-6.14.0-10-generic linux-modules-extra-6.14.0-10-generic
395s   linux-perf linux-tools-6.14.0-10 linux-tools-6.14.0-10-generic pnp.ids
395s The following packages will be upgraded:
395s   apparmor apt apt-utils binutils binutils-common binutils-x86-64-linux-gnu
395s   cloud-init cloud-init-base curl dosfstools exfatprogs fwupd gcc-15-base
395s   gir1.2-girepository-2.0 gir1.2-glib-2.0 htop hwdata initramfs-tools
395s   initramfs-tools-bin initramfs-tools-core libapparmor1 libapt-pkg7.0
395s   libassuan9 libatomic1 libaudit-common libaudit1 libbinutils libbrotli1
395s   libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libctf-nobfd0 libctf0
395s   libcurl3t64-gnutls libcurl4t64 libestr0 libftdi1-2 libfwupd3 libgcc-s1
395s   libgirepository-1.0-1 libglib2.0-0t64 libglib2.0-data libgpgme11t64
395s   libgprofng0 libjemalloc2 liblz4-1 liblzma5 libmm-glib0 libncurses6
395s   libncursesw6 libnewt0.52 libnl-3-200 libnl-genl-3-200 libnl-route-3-200
395s   libnss-systemd libpam-systemd libparted2t64 libpci3 libpython3-stdlib
395s   libpython3.13 libpython3.13-minimal libpython3.13-stdlib libseccomp2
395s   libselinux1 libsemanage-common libsemanage2 libsframe1 libsqlite3-0
395s   libstdc++6 libsystemd-shared libsystemd0 libtinfo6 libudev1 libxml2
395s   linux-firmware linux-generic linux-headers-generic linux-headers-virtual
395s   linux-image-generic linux-image-virtual linux-libc-dev linux-tools-common
395s   linux-virtual locales media-types ncurses-base ncurses-bin ncurses-term
395s   parted pci.ids pciutils pinentry-curses python-apt-common python3
395s   python3-apt python3-bcrypt python3-cffi-backend python3-dbus python3-gi
395s   python3-jinja2 python3-lazr.uri python3-markupsafe python3-minimal
395s   python3-newt python3-rpds-py python3-systemd python3-yaml python3.13
395s   python3.13-gdbm python3.13-minimal rsync rsyslog strace systemd
395s   systemd-cryptsetup systemd-resolved systemd-sysv systemd-timesyncd
395s   ubuntu-kernel-accessories ubuntu-minimal ubuntu-standard udev whiptail
395s   xz-utils
395s 126 upgraded, 12 newly installed, 0 to remove and 0 not upgraded.
395s Need to get 829 MB of archives.
395s After this operation, 325 MB of additional disk space will be used.
395s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-bin amd64 6.5+20250216-2 [194 kB]
396s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-dev-bin amd64 2.41-1ubuntu1 [24.7 kB]
396s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6-dev amd64 2.41-1ubuntu1 [2182 kB]
398s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 locales all 2.41-1ubuntu1 [4246 kB]
402s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6 amd64 2.41-1ubuntu1 [3327 kB]
406s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-bin amd64 2.41-1ubuntu1 [701 kB]
406s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-libc-dev amd64 6.14.0-10.10 [1723 kB]
408s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libatomic1 amd64 15-20250222-0ubuntu1 [10.4 kB]
408s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-15-base amd64 15-20250222-0ubuntu1 [53.4 kB]
408s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-s1 amd64 15-20250222-0ubuntu1 [77.8 kB]
408s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++6 amd64 15-20250222-0ubuntu1 [798 kB]
409s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-base all 6.5+20250216-2 [25.9 kB]
409s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-term all 6.5+20250216-2 [276 kB]
409s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 liblz4-1 amd64 1.10.0-4 [66.4 kB]
409s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma5 amd64 5.6.4-1 [157 kB]
410s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd0 amd64 257.3-1ubuntu3 [595 kB]
410s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libnss-systemd amd64 257.3-1ubuntu3 [199 kB]
410s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-sysv amd64 257.3-1ubuntu3 [11.9 kB]
410s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-resolved amd64 257.3-1ubuntu3 [345 kB]
411s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-systemd amd64 257.3-1ubuntu3 [302 kB]
411s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd-shared amd64 257.3-1ubuntu3 [2371 kB]
413s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd amd64 257.3-1ubuntu3 [3052 kB]
417s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-timesyncd amd64 257.3-1ubuntu3 [42.1 kB]
417s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-cryptsetup amd64 257.3-1ubuntu3 [124 kB]
417s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 udev amd64 257.3-1ubuntu3 [1404 kB]
418s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libudev1 amd64 257.3-1ubuntu3 [215 kB]
418s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit-common all 1:4.0.2-2ubuntu2 [6628 B]
418s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libcap-ng0 amd64 0.8.5-4build1 [15.6 kB]
418s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit1 amd64 1:4.0.2-2ubuntu2 [54.0 kB]
418s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libseccomp2 amd64 2.5.5-1ubuntu6 [53.5 kB]
418s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libselinux1 amd64 3.7-3ubuntu3 [87.3 kB]
418s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libapparmor1 amd64 4.1.0~beta5-0ubuntu8 [55.0 kB]
418s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libapt-pkg7.0 amd64 2.9.33 [1138 kB]
419s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 apt amd64 2.9.33 [1439 kB]
421s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 apt-utils amd64 2.9.33 [222 kB]
421s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-minimal amd64 3.13.2-2 [27.7 kB]
421s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 python3 amd64 3.13.2-2 [24.0 kB]
421s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13 amd64 3.13.2-2 [2341 kB]
426s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 media-types all 13.0.0 [29.9 kB]
426s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses6 amd64 6.5+20250216-2 [126 kB]
426s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libncursesw6 amd64 6.5+20250216-2 [165 kB]
426s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libtinfo6 amd64 6.5+20250216-2 [119 kB]
426s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libsqlite3-0 amd64 3.46.1-2 [715 kB]
426s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.2-2 [735 kB]
426s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.2-2 [2365 kB]
428s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.2-2 [883 kB]
429s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.2-2 [2066 kB]
430s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.4 kB]
430s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 rsync amd64 3.4.1+ds1-3 [482 kB]
431s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod-common all 0.192-4 [15.4 kB]
431s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage-common all 3.7-2.1build1 [7268 B]
431s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage2 amd64 3.7-2.1build1 [106 kB]
431s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libassuan9 amd64 3.0.2-2 [43.1 kB]
431s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-girepository-2.0 amd64 1.83.4-1 [25.3 kB]
431s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-glib-2.0 amd64 2.84.0-1 [184 kB]
431s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-0t64 amd64 2.84.0-1 [1669 kB]
433s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libgirepository-1.0-1 amd64 1.83.4-1 [89.5 kB]
433s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libestr0 amd64 0.1.11-2 [8340 B]
433s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-data all 2.84.0-1 [53.0 kB]
433s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-newt amd64 0.52.24-4ubuntu2 [21.1 kB]
433s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libnewt0.52 amd64 0.52.24-4ubuntu2 [55.7 kB]
433s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2ubuntu5 [772 kB]
434s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 python-apt-common all 2.9.9build1 [21.3 kB]
434s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-apt amd64 2.9.9build1 [172 kB]
434s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-cffi-backend amd64 1.17.1-2build2 [96.6 kB]
434s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dbus amd64 1.3.2-5build5 [102 kB]
434s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-4build1 [252 kB]
434s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-yaml amd64 6.0.2-1build2 [144 kB]
434s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 rsyslog amd64 8.2412.0-2ubuntu2 [555 kB]
435s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 whiptail amd64 0.52.24-4ubuntu2 [19.1 kB]
435s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-minimal amd64 1.549 [11.5 kB]
435s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 apparmor amd64 4.1.0~beta5-0ubuntu8 [701 kB]
435s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 dosfstools amd64 4.2-1.2 [95.0 kB]
435s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-genl-3-200 amd64 3.7.0-1 [12.2 kB]
435s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-route-3-200 amd64 3.7.0-1 [191 kB]
435s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-3-200 amd64 3.7.0-1 [64.9 kB]
436s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 parted amd64 3.6-5 [53.9 kB]
436s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libparted2t64 amd64 3.6-5 [158 kB]
436s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 pci.ids all 0.0~2025.03.09-1 [285 kB]
436s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 pciutils amd64 1:3.13.0-2 [110 kB]
436s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 libpci3 amd64 1:3.13.0-2 [39.8 kB]
436s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 strace amd64 6.13+ds-1ubuntu1 [622 kB]
437s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 xz-utils amd64 5.6.4-1 [278 kB]
437s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-standard amd64 1.549 [11.5 kB]
437s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libgprofng0 amd64 2.44-3ubuntu1 [886 kB]
438s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf0 amd64 2.44-3ubuntu1 [96.5 kB]
438s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf-nobfd0 amd64 2.44-3ubuntu1 [98.9 kB]
438s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-x86-64-linux-gnu amd64 2.44-3ubuntu1 [1108 kB]
439s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libbinutils amd64 2.44-3ubuntu1 [585 kB]
439s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils amd64 2.44-3ubuntu1 [208 kB]
439s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-common amd64 2.44-3ubuntu1 [215 kB]
439s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libsframe1 amd64 2.44-3ubuntu1 [14.8 kB]
439s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 hwdata all 0.393-3 [1562 B]
439s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 pnp.ids all 0.393-3 [29.5 kB]
439s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-common all 6.14.0-10.10 [295 kB]
440s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 bpftool amd64 7.6.0+6.14.0-10.10 [1147 kB]
440s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-markupsafe amd64 2.1.5-1build4 [13.4 kB]
440s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB]
440s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init-base all 25.1-0ubuntu3 [616 kB]
441s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libbrotli1 amd64 1.1.0-2build4 [365 kB]
441s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 curl amd64 8.12.1-3ubuntu1 [258 kB]
442s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4t64 amd64 8.12.1-3ubuntu1 [437 kB]
442s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 exfatprogs amd64 1.2.8-1 [76.3 kB]
442s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl3t64-gnutls amd64 8.12.1-3ubuntu1 [432 kB]
443s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 fwupd amd64 2.0.6-4 [5408 kB]
448s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libfwupd3 amd64 2.0.6-4 [136 kB]
448s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libmm-glib0 amd64 1.23.4-0ubuntu3 [251 kB]
448s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 htop amd64 3.4.0-2 [195 kB]
448s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-firmware amd64 20250310.git9e1370d3-0ubuntu1 [571 MB]
706s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools all 0.146ubuntu1 [7920 B]
706s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-core all 0.146ubuntu1 [51.9 kB]
706s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-bin amd64 0.146ubuntu1 [26.2 kB]
706s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod1t64 amd64 0.192-4 [21.0 kB]
706s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 libftdi1-2 amd64 1.5-8build1 [30.2 kB]
706s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libgpgme11t64 amd64 1.24.2-1ubuntu2 [155 kB]
706s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libjemalloc2 amd64 5.3.0-3 [277 kB]
706s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-6.14.0-10-generic amd64 6.14.0-10.10 [41.2 MB]
717s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-6.14.0-10-generic amd64 6.14.0-10.10 [15.3 MB]
722s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-extra-6.14.0-10-generic amd64 6.14.0-10.10 [120 MB]
784s Get:120 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-generic amd64 6.14.0-10.10 [1730 B]
784s Get:121 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-generic amd64 6.14.0-10.10 [11.1 kB]
784s Get:122 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-virtual amd64 6.14.0-10.10 [1722 B]
784s Get:123 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-virtual amd64 6.14.0-10.10 [11.1 kB]
784s Get:124 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-virtual amd64 6.14.0-10.10 [1642 B]
784s Get:125 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10 all 6.14.0-10.10 [14.2 MB]
791s Get:126 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10-generic amd64 6.14.0-10.10 [3915 kB]
793s Get:127 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-generic amd64 6.14.0-10.10 [11.0 kB]
793s Get:128 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-perf amd64 6.14.0-10.10 [4122 kB]
796s Get:129 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10 amd64 6.14.0-10.10 [1394 kB]
797s Get:130 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10-generic amd64 6.14.0-10.10 [830 B]
797s Get:131 http://ftpmaster.internal/ubuntu plucky/main amd64 pinentry-curses amd64 1.3.1-2ubuntu3 [42.3 kB]
797s Get:132 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lazr.uri all 1.0.6-6 [13.7 kB]
797s Get:133 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-rpds-py amd64 0.21.0-2ubuntu2 [278 kB]
797s Get:134 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-systemd amd64 235-1build6 [43.9 kB]
797s Get:135 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-gdbm amd64 3.13.2-2 [31.9 kB]
797s Get:136 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-kernel-accessories amd64 1.549 [11.2 kB]
797s Get:137 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init all 25.1-0ubuntu3 [2100 B]
797s Get:138 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-bcrypt amd64 4.2.0-2.1build1 [221 kB]
797s Preconfiguring packages ...
798s Fetched 829 MB in 6min 42s (2063 kB/s)
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798s Preparing to unpack .../ncurses-bin_6.5+20250216-2_amd64.deb ...
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798s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu1_amd64.deb ...
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798s Checking for services that may need to be restarted...
798s Checking init scripts...
798s Checking for services that may need to be restarted...
798s Checking init scripts...
799s Stopping some services possibly affected by the upgrade (will be restarted later):
799s   cron: stopping...done.
799s 
799s Unpacking libc6:amd64 (2.41-1ubuntu1) over (2.40-4ubuntu1) ...
799s Setting up libc6:amd64 (2.41-1ubuntu1) ...
799s Checking for services that may need to be restarted...
799s Checking init scripts...
799s Restarting services possibly affected by the upgrade:
799s   cron: restarting...done.
799s 
799s Services restarted successfully.
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799s Preparing to unpack .../libc-bin_2.41-1ubuntu1_amd64.deb ...
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807s Preparing to unpack .../23-parted_3.6-5_amd64.deb ...
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807s Preparing to unpack .../24-libparted2t64_3.6-5_amd64.deb ...
807s Adding 'diversion of /lib/x86_64-linux-gnu/libparted.so.2 to /lib/x86_64-linux-gnu/libparted.so.2.usr-is-merged by libparted2t64'
807s Adding 'diversion of /lib/x86_64-linux-gnu/libparted.so.2.0.5 to /lib/x86_64-linux-gnu/libparted.so.2.0.5.usr-is-merged by libparted2t64'
807s Unpacking libparted2t64:amd64 (3.6-5) over (3.6-4build1) ...
808s Preparing to unpack .../25-pci.ids_0.0~2025.03.09-1_all.deb ...
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808s Preparing to unpack .../26-pciutils_1%3a3.13.0-2_amd64.deb ...
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808s Preparing to unpack .../28-strace_6.13+ds-1ubuntu1_amd64.deb ...
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808s Preparing to unpack .../36-binutils_2.44-3ubuntu1_amd64.deb ...
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808s Preparing to unpack .../38-libsframe1_2.44-3ubuntu1_amd64.deb ...
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808s Preparing to unpack .../39-hwdata_0.393-3_all.deb ...
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808s Preparing to unpack .../41-linux-tools-common_6.14.0-10.10_all.deb ...
808s Unpacking linux-tools-common (6.14.0-10.10) over (6.12.0-16.16) ...
808s Selecting previously unselected package bpftool.
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808s Preparing to unpack .../43-python3-markupsafe_2.1.5-1build4_amd64.deb ...
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808s Preparing to unpack .../44-python3-jinja2_3.1.5-2ubuntu1_all.deb ...
808s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ...
808s Preparing to unpack .../45-cloud-init-base_25.1-0ubuntu3_all.deb ...
809s Unpacking cloud-init-base (25.1-0ubuntu3) over (25.1-0ubuntu2) ...
809s Preparing to unpack .../46-libbrotli1_1.1.0-2build4_amd64.deb ...
809s Unpacking libbrotli1:amd64 (1.1.0-2build4) over (1.1.0-2build3) ...
809s Preparing to unpack .../47-curl_8.12.1-3ubuntu1_amd64.deb ...
809s Unpacking curl (8.12.1-3ubuntu1) over (8.12.1-2ubuntu1) ...
809s Preparing to unpack .../48-libcurl4t64_8.12.1-3ubuntu1_amd64.deb ...
809s Unpacking libcurl4t64:amd64 (8.12.1-3ubuntu1) over (8.12.1-2ubuntu1) ...
809s Preparing to unpack .../49-exfatprogs_1.2.8-1_amd64.deb ...
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809s Preparing to unpack .../50-libcurl3t64-gnutls_8.12.1-3ubuntu1_amd64.deb ...
809s Unpacking libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) over (8.12.1-2ubuntu1) ...
809s Preparing to unpack .../51-fwupd_2.0.6-4_amd64.deb ...
809s Unpacking fwupd (2.0.6-4) over (2.0.6-3) ...
809s Preparing to unpack .../52-libfwupd3_2.0.6-4_amd64.deb ...
809s Unpacking libfwupd3:amd64 (2.0.6-4) over (2.0.6-3) ...
809s Preparing to unpack .../53-libmm-glib0_1.23.4-0ubuntu3_amd64.deb ...
809s Unpacking libmm-glib0:amd64 (1.23.4-0ubuntu3) over (1.23.4-0ubuntu2) ...
809s Preparing to unpack .../54-htop_3.4.0-2_amd64.deb ...
809s Unpacking htop (3.4.0-2) over (3.3.0-5) ...
809s Preparing to unpack .../55-linux-firmware_20250310.git9e1370d3-0ubuntu1_amd64.deb ...
809s Unpacking linux-firmware (20250310.git9e1370d3-0ubuntu1) over (20250204.git0fd450ee-0ubuntu1) ...
812s Preparing to unpack .../56-initramfs-tools_0.146ubuntu1_all.deb ...
812s Unpacking initramfs-tools (0.146ubuntu1) over (0.145ubuntu3) ...
812s Preparing to unpack .../57-initramfs-tools-core_0.146ubuntu1_all.deb ...
812s Unpacking initramfs-tools-core (0.146ubuntu1) over (0.145ubuntu3) ...
813s Preparing to unpack .../58-initramfs-tools-bin_0.146ubuntu1_amd64.deb ...
813s Unpacking initramfs-tools-bin (0.146ubuntu1) over (0.145ubuntu3) ...
813s Selecting previously unselected package libdebuginfod1t64:amd64.
813s Preparing to unpack .../59-libdebuginfod1t64_0.192-4_amd64.deb ...
813s Unpacking libdebuginfod1t64:amd64 (0.192-4) ...
813s Preparing to unpack .../60-libftdi1-2_1.5-8build1_amd64.deb ...
813s Unpacking libftdi1-2:amd64 (1.5-8build1) over (1.5-8) ...
813s Preparing to unpack .../61-libgpgme11t64_1.24.2-1ubuntu2_amd64.deb ...
813s Unpacking libgpgme11t64:amd64 (1.24.2-1ubuntu2) over (1.24.2-1ubuntu1) ...
813s Preparing to unpack .../62-libjemalloc2_5.3.0-3_amd64.deb ...
813s Unpacking libjemalloc2:amd64 (5.3.0-3) over (5.3.0-2build1) ...
813s Selecting previously unselected package linux-modules-6.14.0-10-generic.
813s Preparing to unpack .../63-linux-modules-6.14.0-10-generic_6.14.0-10.10_amd64.deb ...
813s Unpacking linux-modules-6.14.0-10-generic (6.14.0-10.10) ...
813s Selecting previously unselected package linux-image-6.14.0-10-generic.
813s Preparing to unpack .../64-linux-image-6.14.0-10-generic_6.14.0-10.10_amd64.deb ...
813s Unpacking linux-image-6.14.0-10-generic (6.14.0-10.10) ...
813s Selecting previously unselected package linux-modules-extra-6.14.0-10-generic.
813s Preparing to unpack .../65-linux-modules-extra-6.14.0-10-generic_6.14.0-10.10_amd64.deb ...
813s Unpacking linux-modules-extra-6.14.0-10-generic (6.14.0-10.10) ...
814s Preparing to unpack .../66-linux-generic_6.14.0-10.10_amd64.deb ...
814s Unpacking linux-generic (6.14.0-10.10) over (6.12.0-16.16+2) ...
814s Preparing to unpack .../67-linux-image-generic_6.14.0-10.10_amd64.deb ...
814s Unpacking linux-image-generic (6.14.0-10.10) over (6.12.0-16.16+2) ...
814s Preparing to unpack .../68-linux-virtual_6.14.0-10.10_amd64.deb ...
814s Unpacking linux-virtual (6.14.0-10.10) over (6.12.0-16.16+2) ...
814s Preparing to unpack .../69-linux-image-virtual_6.14.0-10.10_amd64.deb ...
814s Unpacking linux-image-virtual (6.14.0-10.10) over (6.12.0-16.16+2) ...
814s Preparing to unpack .../70-linux-headers-virtual_6.14.0-10.10_amd64.deb ...
814s Unpacking linux-headers-virtual (6.14.0-10.10) over (6.12.0-16.16+2) ...
814s Selecting previously unselected package linux-headers-6.14.0-10.
814s Preparing to unpack .../71-linux-headers-6.14.0-10_6.14.0-10.10_all.deb ...
814s Unpacking linux-headers-6.14.0-10 (6.14.0-10.10) ...
817s Selecting previously unselected package linux-headers-6.14.0-10-generic.
817s Preparing to unpack .../72-linux-headers-6.14.0-10-generic_6.14.0-10.10_amd64.deb ...
817s Unpacking linux-headers-6.14.0-10-generic (6.14.0-10.10) ...
819s Preparing to unpack .../73-linux-headers-generic_6.14.0-10.10_amd64.deb ...
819s Unpacking linux-headers-generic (6.14.0-10.10) over (6.12.0-16.16+2) ...
819s Selecting previously unselected package linux-perf.
819s Preparing to unpack .../74-linux-perf_6.14.0-10.10_amd64.deb ...
819s Unpacking linux-perf (6.14.0-10.10) ...
819s Selecting previously unselected package linux-tools-6.14.0-10.
819s Preparing to unpack .../75-linux-tools-6.14.0-10_6.14.0-10.10_amd64.deb ...
819s Unpacking linux-tools-6.14.0-10 (6.14.0-10.10) ...
819s Selecting previously unselected package linux-tools-6.14.0-10-generic.
819s Preparing to unpack .../76-linux-tools-6.14.0-10-generic_6.14.0-10.10_amd64.deb ...
819s Unpacking linux-tools-6.14.0-10-generic (6.14.0-10.10) ...
819s Preparing to unpack .../77-pinentry-curses_1.3.1-2ubuntu3_amd64.deb ...
819s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ...
819s Preparing to unpack .../78-python3-lazr.uri_1.0.6-6_all.deb ...
819s Unpacking python3-lazr.uri (1.0.6-6) over (1.0.6-5) ...
819s Preparing to unpack .../79-python3-rpds-py_0.21.0-2ubuntu2_amd64.deb ...
819s Unpacking python3-rpds-py (0.21.0-2ubuntu2) over (0.21.0-2ubuntu1) ...
819s Preparing to unpack .../80-python3-systemd_235-1build6_amd64.deb ...
819s Unpacking python3-systemd (235-1build6) over (235-1build5) ...
819s Preparing to unpack .../81-python3.13-gdbm_3.13.2-2_amd64.deb ...
819s Unpacking python3.13-gdbm (3.13.2-2) over (3.13.2-1) ...
819s Preparing to unpack .../82-ubuntu-kernel-accessories_1.549_amd64.deb ...
819s Unpacking ubuntu-kernel-accessories (1.549) over (1.548) ...
819s Preparing to unpack .../83-cloud-init_25.1-0ubuntu3_all.deb ...
819s Unpacking cloud-init (25.1-0ubuntu3) over (25.1-0ubuntu2) ...
819s Preparing to unpack .../84-python3-bcrypt_4.2.0-2.1build1_amd64.deb ...
819s Unpacking python3-bcrypt (4.2.0-2.1build1) over (4.2.0-2.1) ...
819s Setting up linux-headers-6.14.0-10 (6.14.0-10.10) ...
819s Setting up media-types (13.0.0) ...
819s Installing new version of config file /etc/mime.types ...
819s Setting up linux-headers-6.14.0-10-generic (6.14.0-10.10) ...
819s Setting up ubuntu-kernel-accessories (1.549) ...
819s Setting up libapparmor1:amd64 (4.1.0~beta5-0ubuntu8) ...
819s Setting up pci.ids (0.0~2025.03.09-1) ...
819s Setting up libnewt0.52:amd64 (0.52.24-4ubuntu2) ...
819s Setting up apt-utils (2.9.33) ...
819s Setting up libdebuginfod-common (0.192-4) ...
820s Setting up exfatprogs (1.2.8-1) ...
820s Setting up linux-firmware (20250310.git9e1370d3-0ubuntu1) ...
820s Setting up bpftool (7.6.0+6.14.0-10.10) ...
820s Setting up libestr0:amd64 (0.1.11-2) ...
820s Setting up libbrotli1:amd64 (1.1.0-2build4) ...
820s Setting up libsqlite3-0:amd64 (3.46.1-2) ...
820s Setting up dosfstools (4.2-1.2) ...
820s Setting up rsyslog (8.2412.0-2ubuntu2) ...
820s info: The user `syslog' is already a member of `adm'.
821s Setting up binutils-common:amd64 (2.44-3ubuntu1) ...
821s Setting up libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) ...
821s Setting up linux-libc-dev:amd64 (6.14.0-10.10) ...
821s Setting up libctf-nobfd0:amd64 (2.44-3ubuntu1) ...
821s Setting up systemd (257.3-1ubuntu3) ...
821s /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring.

821s Created symlink '/run/systemd/system/tmp.mount' → '/dev/null'.

821s /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring.

821s Setting up libparted2t64:amd64 (3.6-5) ...
821s Removing 'diversion of /lib/x86_64-linux-gnu/libparted.so.2 to /lib/x86_64-linux-gnu/libparted.so.2.usr-is-merged by libparted2t64'
822s Removing 'diversion of /lib/x86_64-linux-gnu/libparted.so.2.0.5 to /lib/x86_64-linux-gnu/libparted.so.2.0.5.usr-is-merged by libparted2t64'
822s Setting up linux-headers-generic (6.14.0-10.10) ...
822s Setting up libjemalloc2:amd64 (5.3.0-3) ...
822s Setting up locales (2.41-1ubuntu1) ...
822s Installing new version of config file /etc/locale.alias ...
822s Generating locales (this might take a while)...
824s   en_US.UTF-8... done
824s Generation complete.
824s Setting up libsframe1:amd64 (2.44-3ubuntu1) ...
824s Setting up libpython3.13-minimal:amd64 (3.13.2-2) ...
824s Setting up apparmor (4.1.0~beta5-0ubuntu8) ...
824s Installing new version of config file /etc/apparmor.d/fusermount3 ...
824s Installing new version of config file /etc/apparmor.d/lsusb ...
824s Installing new version of config file /etc/apparmor.d/openvpn ...
825s Reloading AppArmor profiles 
826s Setting up libftdi1-2:amd64 (1.5-8build1) ...
826s Setting up libglib2.0-data (2.84.0-1) ...
826s Setting up systemd-cryptsetup (257.3-1ubuntu3) ...
826s Setting up libncurses6:amd64 (6.5+20250216-2) ...
826s Setting up strace (6.13+ds-1ubuntu1) ...
826s Setting up xz-utils (5.6.4-1) ...
826s Setting up systemd-timesyncd (257.3-1ubuntu3) ...
827s systemd-time-wait-sync.service is a disabled or a static unit not running, not starting it.
827s Setting up libatomic1:amd64 (15-20250222-0ubuntu1) ...
827s Setting up udev (257.3-1ubuntu3) ...
827s Setting up linux-modules-6.14.0-10-generic (6.14.0-10.10) ...
829s Setting up libncursesw6:amd64 (6.5+20250216-2) ...
829s Setting up libpci3:amd64 (1:3.13.0-2) ...
829s Setting up whiptail (0.52.24-4ubuntu2) ...
829s Setting up python-apt-common (2.9.9build1) ...
829s Setting up pnp.ids (0.393-3) ...
829s Setting up libnl-3-200:amd64 (3.7.0-1) ...
829s Setting up python3.13-minimal (3.13.2-2) ...
830s Setting up libgpgme11t64:amd64 (1.24.2-1ubuntu2) ...
830s Setting up libbinutils:amd64 (2.44-3ubuntu1) ...
830s Setting up libc-dev-bin (2.41-1ubuntu1) ...
830s Setting up libpython3.13-stdlib:amd64 (3.13.2-2) ...
830s Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2ubuntu5) ...
830s Setting up rsync (3.4.1+ds1-3) ...
831s rsync.service is a disabled or a static unit not running, not starting it.
831s Setting up python3.13-gdbm (3.13.2-2) ...
831s Setting up libpython3-stdlib:amd64 (3.13.2-2) ...
831s Setting up systemd-resolved (257.3-1ubuntu3) ...
831s Setting up initramfs-tools-bin (0.146ubuntu1) ...
831s Setting up ncurses-term (6.5+20250216-2) ...
831s Setting up libctf0:amd64 (2.44-3ubuntu1) ...
831s Setting up libpython3.13:amd64 (3.13.2-2) ...
831s Setting up pinentry-curses (1.3.1-2ubuntu3) ...
831s Setting up libdebuginfod1t64:amd64 (0.192-4) ...
831s Setting up systemd-sysv (257.3-1ubuntu3) ...
831s Setting up linux-headers-virtual (6.14.0-10.10) ...
831s Setting up libcurl4t64:amd64 (8.12.1-3ubuntu1) ...
831s Setting up python3.13 (3.13.2-2) ...
832s Setting up htop (3.4.0-2) ...
832s Setting up linux-image-6.14.0-10-generic (6.14.0-10.10) ...
834s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.12.0-16-generic
834s I: /boot/initrd.img.old is now a symlink to initrd.img-6.12.0-16-generic
834s I: /boot/vmlinuz is now a symlink to vmlinuz-6.14.0-10-generic
834s I: /boot/initrd.img is now a symlink to initrd.img-6.14.0-10-generic
834s Setting up parted (3.6-5) ...
834s Setting up libnss-systemd:amd64 (257.3-1ubuntu3) ...
834s Setting up python3 (3.13.2-2) ...
834s Setting up python3-newt:amd64 (0.52.24-4ubuntu2) ...
834s Setting up python3-markupsafe (2.1.5-1build4) ...
834s Setting up linux-modules-extra-6.14.0-10-generic (6.14.0-10.10) ...
836s Setting up libnl-route-3-200:amd64 (3.7.0-1) ...
836s Setting up hwdata (0.393-3) ...
836s Setting up python3-jinja2 (3.1.5-2ubuntu1) ...
836s Setting up libglib2.0-0t64:amd64 (2.84.0-1) ...
836s No schema files found: doing nothing.
836s Setting up libgprofng0:amd64 (2.44-3ubuntu1) ...
836s Setting up linux-perf (6.14.0-10.10) ...
836s Setting up gir1.2-glib-2.0:amd64 (2.84.0-1) ...
836s Setting up pciutils (1:3.13.0-2) ...
836s Setting up python3-rpds-py (0.21.0-2ubuntu2) ...
836s Setting up libmm-glib0:amd64 (1.23.4-0ubuntu3) ...
836s Setting up libnl-genl-3-200:amd64 (3.7.0-1) ...
836s Setting up libpam-systemd:amd64 (257.3-1ubuntu3) ...
837s Setting up libc6-dev:amd64 (2.41-1ubuntu1) ...
837s Setting up libgirepository-1.0-1:amd64 (1.83.4-1) ...
837s Setting up curl (8.12.1-3ubuntu1) ...
837s Setting up linux-image-virtual (6.14.0-10.10) ...
837s Setting up initramfs-tools-core (0.146ubuntu1) ...
837s Setting up linux-tools-common (6.14.0-10.10) ...
837s Setting up python3-systemd (235-1build6) ...
837s Setting up python3-cffi-backend:amd64 (1.17.1-2build2) ...
837s Setting up binutils-x86-64-linux-gnu (2.44-3ubuntu1) ...
837s Setting up linux-image-generic (6.14.0-10.10) ...
837s Setting up python3-dbus (1.3.2-5build5) ...
837s Setting up linux-tools-6.14.0-10 (6.14.0-10.10) ...
837s Setting up initramfs-tools (0.146ubuntu1) ...
837s Installing new version of config file /etc/kernel/postinst.d/initramfs-tools ...
837s Installing new version of config file /etc/kernel/postrm.d/initramfs-tools ...
837s update-initramfs: deferring update (trigger activated)
837s Setting up linux-generic (6.14.0-10.10) ...
837s Setting up ubuntu-minimal (1.549) ...
837s Setting up python3-apt (2.9.9build1) ...
837s Setting up python3-bcrypt (4.2.0-2.1build1) ...
837s Setting up python3-yaml (6.0.2-1build2) ...
837s Setting up libfwupd3:amd64 (2.0.6-4) ...
837s Setting up python3-lazr.uri (1.0.6-6) ...
837s Setting up binutils (2.44-3ubuntu1) ...
837s Setting up ubuntu-standard (1.549) ...
837s Setting up cloud-init-base (25.1-0ubuntu3) ...
839s Setting up linux-virtual (6.14.0-10.10) ...
839s Setting up gir1.2-girepository-2.0:amd64 (1.83.4-1) ...
839s Setting up python3-gi (3.50.0-4build1) ...
839s Setting up linux-tools-6.14.0-10-generic (6.14.0-10.10) ...
839s Setting up fwupd (2.0.6-4) ...
839s fwupd-refresh.service is a disabled or a static unit not running, not starting it.
840s Setting up cloud-init (25.1-0ubuntu3) ...
840s Processing triggers for man-db (2.13.0-1) ...
841s Processing triggers for dbus (1.16.2-1ubuntu1) ...
841s Processing triggers for shared-mime-info (2.4-5) ...
841s Warning: program compiled against libxml 212 using older 209
842s Processing triggers for libc-bin (2.41-1ubuntu1) ...
842s Processing triggers for linux-image-6.14.0-10-generic (6.14.0-10.10) ...
842s /etc/kernel/postinst.d/initramfs-tools:
842s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic
842s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
851s /etc/kernel/postinst.d/zz-update-grub:
851s Sourcing file `/etc/default/grub'
851s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
851s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg'
851s Generating grub configuration file ...
851s Found linux image: /boot/vmlinuz-6.14.0-10-generic
851s Found initrd image: /boot/initrd.img-6.14.0-10-generic
852s Found linux image: /boot/vmlinuz-6.12.0-16-generic
852s Found initrd image: /boot/initrd.img-6.12.0-16-generic
852s Found linux image: /boot/vmlinuz-6.11.0-8-generic
852s Found initrd image: /boot/initrd.img-6.11.0-8-generic
852s Warning: os-prober will not be executed to detect other bootable partitions.
852s Systems on them will not be added to the GRUB boot configuration.
852s Check GRUB_DISABLE_OS_PROBER documentation entry.
852s Adding boot menu entry for UEFI Firmware Settings ...
852s done
852s Processing triggers for initramfs-tools (0.146ubuntu1) ...
852s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic
852s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
861s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref
861s + /usr/lib/apt/apt-helper analyze-pattern ?true
861s + uname -r
861s + sed s/\./\\./g
861s + running_kernel_pattern=^linux-.*6\.12\.0-16-generic.*
861s + apt list ?obsolete
861s + tail -n+2
861s + cut -d/ -f1
861s + grep -v ^linux-.*6\.12\.0-16-generic.*
862s + obsolete_pkgs=linux-headers-6.11.0-8-generic
862s linux-headers-6.11.0-8
862s linux-headers-6.12.0-16
862s linux-image-6.11.0-8-generic
862s linux-modules-6.11.0-8-generic
862s linux-tools-6.11.0-8-generic
862s linux-tools-6.11.0-8
862s linux-tools-6.12.0-16
862s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove linux-headers-6.11.0-8-generic linux-headers-6.11.0-8 linux-headers-6.12.0-16 linux-image-6.11.0-8-generic linux-modules-6.11.0-8-generic linux-tools-6.11.0-8-generic linux-tools-6.11.0-8 linux-tools-6.12.0-16
862s Reading package lists...
863s Building dependency tree...
863s Reading state information...
863s Solving dependencies...
863s The following packages will be REMOVED:
863s   libnl-genl-3-200* libnsl2* libpython3.12-minimal* libpython3.12-stdlib*
863s   libpython3.12t64* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
863s   linux-headers-6.12.0-16* linux-headers-6.12.0-16-generic*
863s   linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic*
863s   linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic* linux-tools-6.12.0-16*
863s   linux-tools-6.12.0-16-generic*
863s 0 upgraded, 0 newly installed, 15 to remove and 1 not upgraded.
863s After this operation, 371 MB disk space will be freed.
863s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 148643 files and directories currently installed.)
863s Removing libnl-genl-3-200:amd64 (3.7.0-1) ...
863s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ...
863s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ...
863s Removing libpython3.12t64:amd64 (3.12.9-1) ...
863s Removing libpython3.12-stdlib:amd64 (3.12.9-1) ...
864s Removing libnsl2:amd64 (1.3.0-3build3) ...
864s Removing libpython3.12-minimal:amd64 (3.12.9-1) ...
864s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
864s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
866s Removing linux-headers-6.12.0-16-generic (6.12.0-16.16) ...
866s Removing linux-headers-6.12.0-16 (6.12.0-16.16) ...
868s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ...
868s /etc/kernel/postrm.d/initramfs-tools:
868s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic
869s /etc/kernel/postrm.d/zz-update-grub:
869s Sourcing file `/etc/default/grub'
869s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
869s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg'
869s Generating grub configuration file ...
869s Found linux image: /boot/vmlinuz-6.14.0-10-generic
869s Found initrd image: /boot/initrd.img-6.14.0-10-generic
869s Found linux image: /boot/vmlinuz-6.12.0-16-generic
869s Found initrd image: /boot/initrd.img-6.12.0-16-generic
869s Warning: os-prober will not be executed to detect other bootable partitions.
869s Systems on them will not be added to the GRUB boot configuration.
869s Check GRUB_DISABLE_OS_PROBER documentation entry.
869s Adding boot menu entry for UEFI Firmware Settings ...
869s done
869s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
869s Removing linux-tools-6.12.0-16-generic (6.12.0-16.16) ...
869s Removing linux-tools-6.12.0-16 (6.12.0-16.16) ...
869s Processing triggers for libc-bin (2.41-1ubuntu1) ...
870s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 84830 files and directories currently installed.)
870s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ...
870s Purging configuration files for libpython3.12-minimal:amd64 (3.12.9-1) ...
870s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
870s + grep -q trusty /etc/lsb-release
870s + [ ! -d /usr/share/doc/unattended-upgrades ]
870s + [ ! -d /usr/share/doc/lxd ]
870s + [ ! -d /usr/share/doc/lxd-client ]
870s + [ ! -d /usr/share/doc/snapd ]
870s + type iptables
870s + cat
870s + chmod 755 /etc/rc.local
870s + . /etc/rc.local
870s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu
870s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP
870s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP
870s + uname -m
870s + [ x86_64 = ppc64le ]
870s + [ -d /run/systemd/system ]
870s + systemd-detect-virt --quiet --vm
870s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/
870s + cat
870s + grep -q lz4 /etc/initramfs-tools/initramfs.conf
870s + echo COMPRESS=lz4
870s autopkgtest [01:31:17]: upgrading testbed (apt dist-upgrade and autopurge)
870s Reading package lists...
870s Building dependency tree...
870s Reading state information...
871s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
871s Starting 2 pkgProblemResolver with broken count: 0
871s Done
871s Entering ResolveByKeep
871s 
871s Calculating upgrade...
872s The following packages will be upgraded:
872s   libpng16-16t64
872s 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
872s Need to get 217 kB of archives.
872s After this operation, 0 B of additional disk space will be used.
872s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpng16-16t64 amd64 1.6.47-1.1 [217 kB]
872s Fetched 217 kB in 1s (410 kB/s)
872s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 84827 files and directories currently installed.)
872s Preparing to unpack .../libpng16-16t64_1.6.47-1.1_amd64.deb ...
872s Unpacking libpng16-16t64:amd64 (1.6.47-1.1) over (1.6.47-1) ...
872s Setting up libpng16-16t64:amd64 (1.6.47-1.1) ...
872s Processing triggers for libc-bin (2.41-1ubuntu1) ...
873s Reading package lists...
873s Building dependency tree...
873s Reading state information...
873s Starting pkgProblemResolver with broken count: 0
873s Starting 2 pkgProblemResolver with broken count: 0
873s Done
874s Solving dependencies...
874s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
874s autopkgtest [01:31:21]: rebooting testbed after setup commands that affected boot
898s autopkgtest [01:31:45]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 16:07:00 UTC 2025
901s autopkgtest [01:31:48]: @@@@@@@@@@@@@@@@@@@@ apt-source ncbi-tools6
931s Get:1 http://ftpmaster.internal/ubuntu plucky/universe ncbi-tools6 6.1.20170106+dfsg2-5 (dsc) [2905 B]
931s Get:2 http://ftpmaster.internal/ubuntu plucky/universe ncbi-tools6 6.1.20170106+dfsg2-5 (tar) [65.7 MB]
931s Get:3 http://ftpmaster.internal/ubuntu plucky/universe ncbi-tools6 6.1.20170106+dfsg2-5 (diff) [1516 kB]
931s gpgv: Signature made Thu Nov  7 03:13:35 2024 UTC
931s gpgv:                using RSA key 7C3AB9CFD230BD30DD009C591E7091B1F14A64A2
931s gpgv: Can't check signature: No public key
931s dpkg-source: warning: cannot verify inline signature for ./ncbi-tools6_6.1.20170106+dfsg2-5.dsc: no acceptable signature found
935s autopkgtest [01:32:22]: testing package ncbi-tools6 version 6.1.20170106+dfsg2-5
938s autopkgtest [01:32:25]: build not needed
971s autopkgtest [01:32:58]: test run-unit-test: preparing testbed
972s Reading package lists...
972s Building dependency tree...
972s Reading state information...
972s Starting pkgProblemResolver with broken count: 0
972s Starting 2 pkgProblemResolver with broken count: 0
972s Done
973s The following NEW packages will be installed:
973s   fontconfig-config fonts-dejavu-core fonts-dejavu-mono libbrotli-dev
973s   libbz2-dev libdrm-intel1 libexpat1-dev libfontconfig-dev libfontconfig1
973s   libfontconfig1-dev libfreetype-dev libgbm1 libgl-dev libgl1 libgl1-mesa-dri
973s   libglu1-mesa libglu1-mesa-dev libglvnd0 libglx-dev libglx-mesa0 libglx0
973s   libice-dev libice6 libjpeg-turbo8 libjpeg8 libmotif-common libmotif-dev
973s   libmrm4 libncbi6-dev libncbi6t64 libopengl-dev libopengl0 libpciaccess0
973s   libpkgconf3 libpng-dev libsm-dev libsm6 libuil4 libvibrant6-dev
973s   libvibrant6t64 libvulkan1 libwayland-server0 libx11-dev libx11-xcb1
973s   libxau-dev libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0
973s   libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1-dev libxdmcp-dev libxext-dev
973s   libxft-dev libxft2 libxm4 libxmu-dev libxmu-headers libxmu6 libxrender-dev
973s   libxrender1 libxshmfence1 libxt-dev libxt6t64 libxxf86vm1 mesa-libgallium
973s   ncbi-cn3d ncbi-data ncbi-rrna-data ncbi-tools-bin ncbi-tools-x11 pkgconf
973s   pkgconf-bin uil uuid-dev x11-common x11proto-dev xorg-sgml-doctools
973s   xtrans-dev zlib1g-dev
973s 0 upgraded, 82 newly installed, 0 to remove and 0 not upgraded.
973s Need to get 92.2 MB of archives.
973s After this operation, 540 MB of additional disk space will be used.
973s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB]
973s Get:2 http://ftpmaster.internal/ubuntu plucky/universe amd64 libmotif-common all 2.3.8-4 [10.2 kB]
973s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB]
973s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB]
974s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-2ubuntu1 [37.4 kB]
974s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-2ubuntu1 [164 kB]
974s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB]
974s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B]
974s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB]
974s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB]
974s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB]
974s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB]
974s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB]
974s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libxmu6 amd64 2:1.1.3-3build2 [47.6 kB]
974s Get:15 http://ftpmaster.internal/ubuntu plucky/universe amd64 libxm4 amd64 2.3.8-4 [1090 kB]
974s Get:16 http://ftpmaster.internal/ubuntu plucky/universe amd64 libmrm4 amd64 2.3.8-4 [61.0 kB]
974s Get:17 http://ftpmaster.internal/ubuntu plucky/universe amd64 libuil4 amd64 2.3.8-4 [148 kB]
975s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 libbrotli-dev amd64 1.1.0-2build4 [381 kB]
975s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libbz2-dev amd64 1.0.8-6 [33.8 kB]
975s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libpciaccess0 amd64 0.17-3build1 [18.6 kB]
975s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libdrm-intel1 amd64 2.4.123-1 [68.8 kB]
975s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libexpat1-dev amd64 2.6.4-1 [148 kB]
975s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB]
975s Get:24 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpng-dev amd64 1.6.47-1.1 [298 kB]
975s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libfreetype-dev amd64 2.13.3+dfsg-1 [575 kB]
975s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 uuid-dev amd64 2.40.2-14ubuntu1 [54.5 kB]
975s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libpkgconf3 amd64 1.8.1-4 [32.3 kB]
975s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf-bin amd64 1.8.1-4 [21.6 kB]
975s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf amd64 1.8.1-4 [16.8 kB]
975s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig-dev amd64 2.15.0-2ubuntu1 [181 kB]
975s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1-dev amd64 2.15.0-2ubuntu1 [1834 B]
975s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libwayland-server0 amd64 1.23.1-3 [37.2 kB]
975s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libx11-xcb1 amd64 2:1.8.10-2 [7944 B]
975s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-dri3-0 amd64 1.17.0-2 [7508 B]
976s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-present0 amd64 1.17.0-2 [6064 B]
976s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-randr0 amd64 1.17.0-2 [17.9 kB]
976s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-sync1 amd64 1.17.0-2 [9312 B]
976s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-xfixes0 amd64 1.17.0-2 [10.2 kB]
976s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libxshmfence1 amd64 1.3-1build5 [4764 B]
976s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 mesa-libgallium amd64 25.0.1-2ubuntu1 [12.1 MB]
980s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libgbm1 amd64 25.0.1-2ubuntu1 [33.4 kB]
980s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libglvnd0 amd64 1.7.0-1build1 [69.6 kB]
980s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-glx0 amd64 1.17.0-2 [24.8 kB]
980s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B]
980s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libxxf86vm1 amd64 1:1.1.4-1build4 [9282 B]
980s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libvulkan1 amd64 1.4.304.0-1 [147 kB]
980s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libgl1-mesa-dri amd64 25.0.1-2ubuntu1 [35.7 kB]
980s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libglx-mesa0 amd64 25.0.1-2ubuntu1 [146 kB]
980s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libglx0 amd64 1.7.0-1build1 [38.6 kB]
980s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libgl1 amd64 1.7.0-1build1 [102 kB]
980s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 xorg-sgml-doctools all 1:1.11-1.1 [10.9 kB]
980s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 x11proto-dev all 2024.1-1 [606 kB]
980s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libxau-dev amd64 1:1.0.11-1 [9798 B]
980s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libxdmcp-dev amd64 1:1.1.5-1 [26.7 kB]
980s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 xtrans-dev all 1.4.0-1 [68.9 kB]
980s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb1-dev amd64 1.17.0-2 [86.4 kB]
980s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libx11-dev amd64 2:1.8.10-2 [777 kB]
980s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libglx-dev amd64 1.7.0-1build1 [14.2 kB]
980s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libgl-dev amd64 1.7.0-1build1 [102 kB]
980s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libopengl0 amd64 1.7.0-1build1 [32.8 kB]
980s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libglu1-mesa amd64 9.0.2-1.1build1 [152 kB]
980s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libopengl-dev amd64 1.7.0-1build1 [3454 B]
980s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 libglu1-mesa-dev amd64 9.0.2-1.1build1 [237 kB]
981s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libice-dev amd64 2:1.1.1-1 [54.0 kB]
981s Get:65 http://ftpmaster.internal/ubuntu plucky/universe amd64 ncbi-data all 6.1.20170106+dfsg2-5 [3966 kB]
982s Get:66 http://ftpmaster.internal/ubuntu plucky/universe amd64 libncbi6t64 amd64 6.1.20170106+dfsg2-5 [4726 kB]
984s Get:67 http://ftpmaster.internal/ubuntu plucky/universe amd64 libncbi6-dev amd64 6.1.20170106+dfsg2-5 [6531 kB]
986s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm-dev amd64 2:1.2.4-1 [19.2 kB]
986s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender-dev amd64 1:0.9.10-1.1build1 [26.3 kB]
986s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft-dev amd64 2.3.6-1build1 [64.3 kB]
986s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt-dev amd64 1:1.2.1-1.2build1 [394 kB]
986s Get:72 http://ftpmaster.internal/ubuntu plucky/universe amd64 uil amd64 2.3.8-4 [7564 B]
986s Get:73 http://ftpmaster.internal/ubuntu plucky/universe amd64 libmotif-dev amd64 2.3.8-4 [2599 kB]
987s Get:74 http://ftpmaster.internal/ubuntu plucky/universe amd64 libvibrant6t64 amd64 6.1.20170106+dfsg2-5 [1470 kB]
988s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libxext-dev amd64 2:1.3.4-1build2 [83.5 kB]
988s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libxmu-headers all 2:1.1.3-3build2 [53.0 kB]
988s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libxmu-dev amd64 2:1.1.3-3build2 [55.4 kB]
988s Get:78 http://ftpmaster.internal/ubuntu plucky/universe amd64 libvibrant6-dev amd64 6.1.20170106+dfsg2-5 [1816 kB]
988s Get:79 http://ftpmaster.internal/ubuntu plucky/universe amd64 ncbi-cn3d amd64 3.0.20170106+dfsg2-5 [10.2 kB]
988s Get:80 http://ftpmaster.internal/ubuntu plucky/universe amd64 ncbi-rrna-data all 6.1.20170106+dfsg2-5 [46.3 MB]
1001s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 ncbi-tools-bin amd64 6.1.20170106+dfsg2-5 [1915 kB]
1002s Get:82 http://ftpmaster.internal/ubuntu plucky/universe amd64 ncbi-tools-x11 amd64 6.1.20170106+dfsg2-5 [1120 kB]
1002s Fetched 92.2 MB in 29s (3141 kB/s)
1002s Selecting previously unselected package x11-common.
1003s (Reading database ... 
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(Reading database ... 84827 files and directories currently installed.)
1003s Preparing to unpack .../x11-common_1%3a7.7+23ubuntu3_all.deb ...
1003s Unpacking x11-common (1:7.7+23ubuntu3) ...
1003s Setting up x11-common (1:7.7+23ubuntu3) ...
1003s Selecting previously unselected package libmotif-common.
1003s (Reading database ... 
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(Reading database ... 100%
(Reading database ... 84856 files and directories currently installed.)
1003s Preparing to unpack .../00-libmotif-common_2.3.8-4_all.deb ...
1003s Unpacking libmotif-common (2.3.8-4) ...
1003s Selecting previously unselected package fonts-dejavu-mono.
1003s Preparing to unpack .../01-fonts-dejavu-mono_2.37-8_all.deb ...
1003s Unpacking fonts-dejavu-mono (2.37-8) ...
1003s Selecting previously unselected package fonts-dejavu-core.
1003s Preparing to unpack .../02-fonts-dejavu-core_2.37-8_all.deb ...
1003s Unpacking fonts-dejavu-core (2.37-8) ...
1003s Selecting previously unselected package fontconfig-config.
1003s Preparing to unpack .../03-fontconfig-config_2.15.0-2ubuntu1_amd64.deb ...
1003s Unpacking fontconfig-config (2.15.0-2ubuntu1) ...
1003s Selecting previously unselected package libfontconfig1:amd64.
1003s Preparing to unpack .../04-libfontconfig1_2.15.0-2ubuntu1_amd64.deb ...
1003s Unpacking libfontconfig1:amd64 (2.15.0-2ubuntu1) ...
1003s Selecting previously unselected package libjpeg-turbo8:amd64.
1003s Preparing to unpack .../05-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ...
1003s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ...
1003s Selecting previously unselected package libjpeg8:amd64.
1003s Preparing to unpack .../06-libjpeg8_8c-2ubuntu11_amd64.deb ...
1003s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ...
1003s Selecting previously unselected package libxrender1:amd64.
1003s Preparing to unpack .../07-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ...
1003s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ...
1003s Selecting previously unselected package libxft2:amd64.
1003s Preparing to unpack .../08-libxft2_2.3.6-1build1_amd64.deb ...
1003s Unpacking libxft2:amd64 (2.3.6-1build1) ...
1003s Selecting previously unselected package libice6:amd64.
1003s Preparing to unpack .../09-libice6_2%3a1.1.1-1_amd64.deb ...
1003s Unpacking libice6:amd64 (2:1.1.1-1) ...
1004s Selecting previously unselected package libsm6:amd64.
1004s Preparing to unpack .../10-libsm6_2%3a1.2.4-1_amd64.deb ...
1004s Unpacking libsm6:amd64 (2:1.2.4-1) ...
1004s Selecting previously unselected package libxt6t64:amd64.
1004s Preparing to unpack .../11-libxt6t64_1%3a1.2.1-1.2build1_amd64.deb ...
1004s Unpacking libxt6t64:amd64 (1:1.2.1-1.2build1) ...
1004s Selecting previously unselected package libxmu6:amd64.
1004s Preparing to unpack .../12-libxmu6_2%3a1.1.3-3build2_amd64.deb ...
1004s Unpacking libxmu6:amd64 (2:1.1.3-3build2) ...
1004s Selecting previously unselected package libxm4:amd64.
1004s Preparing to unpack .../13-libxm4_2.3.8-4_amd64.deb ...
1004s Unpacking libxm4:amd64 (2.3.8-4) ...
1004s Selecting previously unselected package libmrm4:amd64.
1004s Preparing to unpack .../14-libmrm4_2.3.8-4_amd64.deb ...
1004s Unpacking libmrm4:amd64 (2.3.8-4) ...
1004s Selecting previously unselected package libuil4:amd64.
1004s Preparing to unpack .../15-libuil4_2.3.8-4_amd64.deb ...
1004s Unpacking libuil4:amd64 (2.3.8-4) ...
1004s Selecting previously unselected package libbrotli-dev:amd64.
1004s Preparing to unpack .../16-libbrotli-dev_1.1.0-2build4_amd64.deb ...
1004s Unpacking libbrotli-dev:amd64 (1.1.0-2build4) ...
1004s Selecting previously unselected package libbz2-dev:amd64.
1004s Preparing to unpack .../17-libbz2-dev_1.0.8-6_amd64.deb ...
1004s Unpacking libbz2-dev:amd64 (1.0.8-6) ...
1004s Selecting previously unselected package libpciaccess0:amd64.
1004s Preparing to unpack .../18-libpciaccess0_0.17-3build1_amd64.deb ...
1004s Unpacking libpciaccess0:amd64 (0.17-3build1) ...
1004s Selecting previously unselected package libdrm-intel1:amd64.
1004s Preparing to unpack .../19-libdrm-intel1_2.4.123-1_amd64.deb ...
1004s Unpacking libdrm-intel1:amd64 (2.4.123-1) ...
1004s Selecting previously unselected package libexpat1-dev:amd64.
1004s Preparing to unpack .../20-libexpat1-dev_2.6.4-1_amd64.deb ...
1004s Unpacking libexpat1-dev:amd64 (2.6.4-1) ...
1004s Selecting previously unselected package zlib1g-dev:amd64.
1004s Preparing to unpack .../21-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ...
1004s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
1004s Selecting previously unselected package libpng-dev:amd64.
1004s Preparing to unpack .../22-libpng-dev_1.6.47-1.1_amd64.deb ...
1004s Unpacking libpng-dev:amd64 (1.6.47-1.1) ...
1004s Selecting previously unselected package libfreetype-dev:amd64.
1004s Preparing to unpack .../23-libfreetype-dev_2.13.3+dfsg-1_amd64.deb ...
1004s Unpacking libfreetype-dev:amd64 (2.13.3+dfsg-1) ...
1004s Selecting previously unselected package uuid-dev:amd64.
1004s Preparing to unpack .../24-uuid-dev_2.40.2-14ubuntu1_amd64.deb ...
1004s Unpacking uuid-dev:amd64 (2.40.2-14ubuntu1) ...
1004s Selecting previously unselected package libpkgconf3:amd64.
1004s Preparing to unpack .../25-libpkgconf3_1.8.1-4_amd64.deb ...
1004s Unpacking libpkgconf3:amd64 (1.8.1-4) ...
1004s Selecting previously unselected package pkgconf-bin.
1004s Preparing to unpack .../26-pkgconf-bin_1.8.1-4_amd64.deb ...
1004s Unpacking pkgconf-bin (1.8.1-4) ...
1004s Selecting previously unselected package pkgconf:amd64.
1004s Preparing to unpack .../27-pkgconf_1.8.1-4_amd64.deb ...
1004s Unpacking pkgconf:amd64 (1.8.1-4) ...
1004s Selecting previously unselected package libfontconfig-dev:amd64.
1004s Preparing to unpack .../28-libfontconfig-dev_2.15.0-2ubuntu1_amd64.deb ...
1004s Unpacking libfontconfig-dev:amd64 (2.15.0-2ubuntu1) ...
1004s Selecting previously unselected package libfontconfig1-dev:amd64.
1004s Preparing to unpack .../29-libfontconfig1-dev_2.15.0-2ubuntu1_amd64.deb ...
1004s Unpacking libfontconfig1-dev:amd64 (2.15.0-2ubuntu1) ...
1004s Selecting previously unselected package libwayland-server0:amd64.
1004s Preparing to unpack .../30-libwayland-server0_1.23.1-3_amd64.deb ...
1004s Unpacking libwayland-server0:amd64 (1.23.1-3) ...
1004s Selecting previously unselected package libx11-xcb1:amd64.
1004s Preparing to unpack .../31-libx11-xcb1_2%3a1.8.10-2_amd64.deb ...
1004s Unpacking libx11-xcb1:amd64 (2:1.8.10-2) ...
1004s Selecting previously unselected package libxcb-dri3-0:amd64.
1004s Preparing to unpack .../32-libxcb-dri3-0_1.17.0-2_amd64.deb ...
1004s Unpacking libxcb-dri3-0:amd64 (1.17.0-2) ...
1004s Selecting previously unselected package libxcb-present0:amd64.
1004s Preparing to unpack .../33-libxcb-present0_1.17.0-2_amd64.deb ...
1004s Unpacking libxcb-present0:amd64 (1.17.0-2) ...
1004s Selecting previously unselected package libxcb-randr0:amd64.
1004s Preparing to unpack .../34-libxcb-randr0_1.17.0-2_amd64.deb ...
1004s Unpacking libxcb-randr0:amd64 (1.17.0-2) ...
1004s Selecting previously unselected package libxcb-sync1:amd64.
1004s Preparing to unpack .../35-libxcb-sync1_1.17.0-2_amd64.deb ...
1004s Unpacking libxcb-sync1:amd64 (1.17.0-2) ...
1004s Selecting previously unselected package libxcb-xfixes0:amd64.
1004s Preparing to unpack .../36-libxcb-xfixes0_1.17.0-2_amd64.deb ...
1004s Unpacking libxcb-xfixes0:amd64 (1.17.0-2) ...
1004s Selecting previously unselected package libxshmfence1:amd64.
1004s Preparing to unpack .../37-libxshmfence1_1.3-1build5_amd64.deb ...
1004s Unpacking libxshmfence1:amd64 (1.3-1build5) ...
1004s Selecting previously unselected package mesa-libgallium:amd64.
1004s Preparing to unpack .../38-mesa-libgallium_25.0.1-2ubuntu1_amd64.deb ...
1004s Unpacking mesa-libgallium:amd64 (25.0.1-2ubuntu1) ...
1004s Selecting previously unselected package libgbm1:amd64.
1004s Preparing to unpack .../39-libgbm1_25.0.1-2ubuntu1_amd64.deb ...
1004s Unpacking libgbm1:amd64 (25.0.1-2ubuntu1) ...
1004s Selecting previously unselected package libglvnd0:amd64.
1004s Preparing to unpack .../40-libglvnd0_1.7.0-1build1_amd64.deb ...
1004s Unpacking libglvnd0:amd64 (1.7.0-1build1) ...
1004s Selecting previously unselected package libxcb-glx0:amd64.
1004s Preparing to unpack .../41-libxcb-glx0_1.17.0-2_amd64.deb ...
1004s Unpacking libxcb-glx0:amd64 (1.17.0-2) ...
1005s Selecting previously unselected package libxcb-shm0:amd64.
1005s Preparing to unpack .../42-libxcb-shm0_1.17.0-2_amd64.deb ...
1005s Unpacking libxcb-shm0:amd64 (1.17.0-2) ...
1005s Selecting previously unselected package libxxf86vm1:amd64.
1005s Preparing to unpack .../43-libxxf86vm1_1%3a1.1.4-1build4_amd64.deb ...
1005s Unpacking libxxf86vm1:amd64 (1:1.1.4-1build4) ...
1005s Selecting previously unselected package libvulkan1:amd64.
1005s Preparing to unpack .../44-libvulkan1_1.4.304.0-1_amd64.deb ...
1005s Unpacking libvulkan1:amd64 (1.4.304.0-1) ...
1005s Selecting previously unselected package libgl1-mesa-dri:amd64.
1005s Preparing to unpack .../45-libgl1-mesa-dri_25.0.1-2ubuntu1_amd64.deb ...
1005s Unpacking libgl1-mesa-dri:amd64 (25.0.1-2ubuntu1) ...
1005s Selecting previously unselected package libglx-mesa0:amd64.
1005s Preparing to unpack .../46-libglx-mesa0_25.0.1-2ubuntu1_amd64.deb ...
1005s Unpacking libglx-mesa0:amd64 (25.0.1-2ubuntu1) ...
1005s Selecting previously unselected package libglx0:amd64.
1005s Preparing to unpack .../47-libglx0_1.7.0-1build1_amd64.deb ...
1005s Unpacking libglx0:amd64 (1.7.0-1build1) ...
1005s Selecting previously unselected package libgl1:amd64.
1005s Preparing to unpack .../48-libgl1_1.7.0-1build1_amd64.deb ...
1005s Unpacking libgl1:amd64 (1.7.0-1build1) ...
1005s Selecting previously unselected package xorg-sgml-doctools.
1005s Preparing to unpack .../49-xorg-sgml-doctools_1%3a1.11-1.1_all.deb ...
1005s Unpacking xorg-sgml-doctools (1:1.11-1.1) ...
1005s Selecting previously unselected package x11proto-dev.
1005s Preparing to unpack .../50-x11proto-dev_2024.1-1_all.deb ...
1005s Unpacking x11proto-dev (2024.1-1) ...
1005s Selecting previously unselected package libxau-dev:amd64.
1005s Preparing to unpack .../51-libxau-dev_1%3a1.0.11-1_amd64.deb ...
1005s Unpacking libxau-dev:amd64 (1:1.0.11-1) ...
1005s Selecting previously unselected package libxdmcp-dev:amd64.
1005s Preparing to unpack .../52-libxdmcp-dev_1%3a1.1.5-1_amd64.deb ...
1005s Unpacking libxdmcp-dev:amd64 (1:1.1.5-1) ...
1005s Selecting previously unselected package xtrans-dev.
1005s Preparing to unpack .../53-xtrans-dev_1.4.0-1_all.deb ...
1005s Unpacking xtrans-dev (1.4.0-1) ...
1005s Selecting previously unselected package libxcb1-dev:amd64.
1005s Preparing to unpack .../54-libxcb1-dev_1.17.0-2_amd64.deb ...
1005s Unpacking libxcb1-dev:amd64 (1.17.0-2) ...
1005s Selecting previously unselected package libx11-dev:amd64.
1005s Preparing to unpack .../55-libx11-dev_2%3a1.8.10-2_amd64.deb ...
1005s Unpacking libx11-dev:amd64 (2:1.8.10-2) ...
1005s Selecting previously unselected package libglx-dev:amd64.
1005s Preparing to unpack .../56-libglx-dev_1.7.0-1build1_amd64.deb ...
1005s Unpacking libglx-dev:amd64 (1.7.0-1build1) ...
1005s Selecting previously unselected package libgl-dev:amd64.
1005s Preparing to unpack .../57-libgl-dev_1.7.0-1build1_amd64.deb ...
1005s Unpacking libgl-dev:amd64 (1.7.0-1build1) ...
1005s Selecting previously unselected package libopengl0:amd64.
1005s Preparing to unpack .../58-libopengl0_1.7.0-1build1_amd64.deb ...
1005s Unpacking libopengl0:amd64 (1.7.0-1build1) ...
1005s Selecting previously unselected package libglu1-mesa:amd64.
1005s Preparing to unpack .../59-libglu1-mesa_9.0.2-1.1build1_amd64.deb ...
1005s Unpacking libglu1-mesa:amd64 (9.0.2-1.1build1) ...
1005s Selecting previously unselected package libopengl-dev:amd64.
1005s Preparing to unpack .../60-libopengl-dev_1.7.0-1build1_amd64.deb ...
1005s Unpacking libopengl-dev:amd64 (1.7.0-1build1) ...
1005s Selecting previously unselected package libglu1-mesa-dev:amd64.
1005s Preparing to unpack .../61-libglu1-mesa-dev_9.0.2-1.1build1_amd64.deb ...
1005s Unpacking libglu1-mesa-dev:amd64 (9.0.2-1.1build1) ...
1005s Selecting previously unselected package libice-dev:amd64.
1005s Preparing to unpack .../62-libice-dev_2%3a1.1.1-1_amd64.deb ...
1005s Unpacking libice-dev:amd64 (2:1.1.1-1) ...
1005s Selecting previously unselected package ncbi-data.
1005s Preparing to unpack .../63-ncbi-data_6.1.20170106+dfsg2-5_all.deb ...
1005s Unpacking ncbi-data (6.1.20170106+dfsg2-5) ...
1005s Selecting previously unselected package libncbi6t64:amd64.
1005s Preparing to unpack .../64-libncbi6t64_6.1.20170106+dfsg2-5_amd64.deb ...
1005s Unpacking libncbi6t64:amd64 (6.1.20170106+dfsg2-5) ...
1005s Selecting previously unselected package libncbi6-dev:amd64.
1005s Preparing to unpack .../65-libncbi6-dev_6.1.20170106+dfsg2-5_amd64.deb ...
1005s Unpacking libncbi6-dev:amd64 (6.1.20170106+dfsg2-5) ...
1006s Selecting previously unselected package libsm-dev:amd64.
1006s Preparing to unpack .../66-libsm-dev_2%3a1.2.4-1_amd64.deb ...
1006s Unpacking libsm-dev:amd64 (2:1.2.4-1) ...
1006s Selecting previously unselected package libxrender-dev:amd64.
1006s Preparing to unpack .../67-libxrender-dev_1%3a0.9.10-1.1build1_amd64.deb ...
1006s Unpacking libxrender-dev:amd64 (1:0.9.10-1.1build1) ...
1006s Selecting previously unselected package libxft-dev:amd64.
1006s Preparing to unpack .../68-libxft-dev_2.3.6-1build1_amd64.deb ...
1006s Unpacking libxft-dev:amd64 (2.3.6-1build1) ...
1006s Selecting previously unselected package libxt-dev:amd64.
1006s Preparing to unpack .../69-libxt-dev_1%3a1.2.1-1.2build1_amd64.deb ...
1006s Unpacking libxt-dev:amd64 (1:1.2.1-1.2build1) ...
1006s Selecting previously unselected package uil.
1006s Preparing to unpack .../70-uil_2.3.8-4_amd64.deb ...
1006s Unpacking uil (2.3.8-4) ...
1006s Selecting previously unselected package libmotif-dev:amd64.
1006s Preparing to unpack .../71-libmotif-dev_2.3.8-4_amd64.deb ...
1006s Unpacking libmotif-dev:amd64 (2.3.8-4) ...
1006s Selecting previously unselected package libvibrant6t64:amd64.
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1006s Unpacking libvibrant6t64:amd64 (6.1.20170106+dfsg2-5) ...
1006s Selecting previously unselected package libxext-dev:amd64.
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1006s Unpacking libxext-dev:amd64 (2:1.3.4-1build2) ...
1006s Selecting previously unselected package libxmu-headers.
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1006s Unpacking libxmu-headers (2:1.1.3-3build2) ...
1006s Selecting previously unselected package libxmu-dev:amd64.
1006s Preparing to unpack .../75-libxmu-dev_2%3a1.1.3-3build2_amd64.deb ...
1006s Unpacking libxmu-dev:amd64 (2:1.1.3-3build2) ...
1006s Selecting previously unselected package libvibrant6-dev:amd64.
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1007s Unpacking libvibrant6-dev:amd64 (6.1.20170106+dfsg2-5) ...
1007s Selecting previously unselected package ncbi-cn3d.
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1007s Unpacking ncbi-cn3d (3.0.20170106+dfsg2-5) ...
1007s Selecting previously unselected package ncbi-rrna-data.
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1007s Unpacking ncbi-rrna-data (6.1.20170106+dfsg2-5) ...
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1008s Unpacking ncbi-tools-bin (6.1.20170106+dfsg2-5) ...
1008s Selecting previously unselected package ncbi-tools-x11.
1008s Preparing to unpack .../80-ncbi-tools-x11_6.1.20170106+dfsg2-5_amd64.deb ...
1008s Unpacking ncbi-tools-x11 (6.1.20170106+dfsg2-5) ...
1008s Setting up libxcb-dri3-0:amd64 (1.17.0-2) ...
1008s Setting up ncbi-data (6.1.20170106+dfsg2-5) ...
1008s Setting up libwayland-server0:amd64 (1.23.1-3) ...
1008s Setting up libx11-xcb1:amd64 (2:1.8.10-2) ...
1008s Setting up libice6:amd64 (2:1.1.1-1) ...
1008s Setting up libpciaccess0:amd64 (0.17-3build1) ...
1008s Setting up libxcb-xfixes0:amd64 (1.17.0-2) ...
1008s Setting up libxrender1:amd64 (1:0.9.10-1.1build1) ...
1008s Setting up libglvnd0:amd64 (1.7.0-1build1) ...
1008s Setting up libxcb-glx0:amd64 (1.17.0-2) ...
1008s Setting up libdrm-intel1:amd64 (2.4.123-1) ...
1008s Setting up libxcb-shm0:amd64 (1.17.0-2) ...
1008s Setting up libmotif-common (2.3.8-4) ...
1008s Setting up libopengl0:amd64 (1.7.0-1build1) ...
1008s Setting up libxxf86vm1:amd64 (1:1.1.4-1build4) ...
1008s Setting up libxcb-present0:amd64 (1.17.0-2) ...
1008s Setting up libncbi6t64:amd64 (6.1.20170106+dfsg2-5) ...
1008s Setting up xtrans-dev (1.4.0-1) ...
1008s Setting up libpkgconf3:amd64 (1.8.1-4) ...
1008s Setting up libexpat1-dev:amd64 (2.6.4-1) ...
1008s Setting up libxcb-sync1:amd64 (1.17.0-2) ...
1008s Setting up uuid-dev:amd64 (2.40.2-14ubuntu1) ...
1008s Setting up fonts-dejavu-mono (2.37-8) ...
1008s Setting up fonts-dejavu-core (2.37-8) ...
1008s Setting up pkgconf-bin (1.8.1-4) ...
1008s Setting up libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ...
1008s Setting up libvulkan1:amd64 (1.4.304.0-1) ...
1008s Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
1008s Setting up ncbi-tools-bin (6.1.20170106+dfsg2-5) ...
1008s Setting up libxshmfence1:amd64 (1.3-1build5) ...
1008s Setting up libxcb-randr0:amd64 (1.17.0-2) ...
1008s Setting up xorg-sgml-doctools (1:1.11-1.1) ...
1008s Setting up libglu1-mesa:amd64 (9.0.2-1.1build1) ...
1008s Setting up libopengl-dev:amd64 (1.7.0-1build1) ...
1008s Setting up libsm6:amd64 (2:1.2.4-1) ...
1008s Setting up libbrotli-dev:amd64 (1.1.0-2build4) ...
1008s Setting up ncbi-rrna-data (6.1.20170106+dfsg2-5) ...
1008s Setting up libbz2-dev:amd64 (1.0.8-6) ...
1008s Setting up libjpeg8:amd64 (8c-2ubuntu11) ...
1008s Setting up x11proto-dev (2024.1-1) ...
1008s Setting up libncbi6-dev:amd64 (6.1.20170106+dfsg2-5) ...
1008s Setting up mesa-libgallium:amd64 (25.0.1-2ubuntu1) ...
1008s Setting up libxau-dev:amd64 (1:1.0.11-1) ...
1008s Setting up libice-dev:amd64 (2:1.1.1-1) ...
1008s Setting up libgbm1:amd64 (25.0.1-2ubuntu1) ...
1008s Setting up libsm-dev:amd64 (2:1.2.4-1) ...
1008s Setting up fontconfig-config (2.15.0-2ubuntu1) ...
1008s Setting up libgl1-mesa-dri:amd64 (25.0.1-2ubuntu1) ...
1008s Setting up libpng-dev:amd64 (1.6.47-1.1) ...
1008s Setting up pkgconf:amd64 (1.8.1-4) ...
1008s Setting up libfreetype-dev:amd64 (2.13.3+dfsg-1) ...
1008s Setting up libxdmcp-dev:amd64 (1:1.1.5-1) ...
1008s Setting up libxt6t64:amd64 (1:1.2.1-1.2build1) ...
1008s Setting up libfontconfig1:amd64 (2.15.0-2ubuntu1) ...
1008s Setting up libxft2:amd64 (2.3.6-1build1) ...
1008s Setting up libxmu6:amd64 (2:1.1.3-3build2) ...
1008s Setting up libglx-mesa0:amd64 (25.0.1-2ubuntu1) ...
1008s Setting up libxcb1-dev:amd64 (1.17.0-2) ...
1008s Setting up libglx0:amd64 (1.7.0-1build1) ...
1008s Setting up libfontconfig-dev:amd64 (2.15.0-2ubuntu1) ...
1008s Setting up libx11-dev:amd64 (2:1.8.10-2) ...
1008s Setting up libgl1:amd64 (1.7.0-1build1) ...
1008s Setting up libxt-dev:amd64 (1:1.2.1-1.2build1) ...
1008s Setting up libxext-dev:amd64 (2:1.3.4-1build2) ...
1008s Setting up libglx-dev:amd64 (1.7.0-1build1) ...
1008s Setting up libxrender-dev:amd64 (1:0.9.10-1.1build1) ...
1008s Setting up libgl-dev:amd64 (1.7.0-1build1) ...
1008s Setting up libxm4:amd64 (2.3.8-4) ...
1008s Setting up libxft-dev:amd64 (2.3.6-1build1) ...
1008s Setting up libxmu-headers (2:1.1.3-3build2) ...
1008s Setting up libfontconfig1-dev:amd64 (2.15.0-2ubuntu1) ...
1008s Setting up libxmu-dev:amd64 (2:1.1.3-3build2) ...
1008s Setting up libvibrant6t64:amd64 (6.1.20170106+dfsg2-5) ...
1008s Setting up libmrm4:amd64 (2.3.8-4) ...
1008s Setting up libglu1-mesa-dev:amd64 (9.0.2-1.1build1) ...
1008s Setting up libuil4:amd64 (2.3.8-4) ...
1008s Setting up uil (2.3.8-4) ...
1008s Setting up libmotif-dev:amd64 (2.3.8-4) ...
1008s Setting up ncbi-cn3d (3.0.20170106+dfsg2-5) ...
1008s update-alternatives: using /usr/bin/Cn3D-3.0 to provide /usr/bin/Cn3D (Cn3D) in auto mode
1008s Setting up ncbi-tools-x11 (6.1.20170106+dfsg2-5) ...
1008s Setting up libvibrant6-dev:amd64 (6.1.20170106+dfsg2-5) ...
1008s Processing triggers for man-db (2.13.0-1) ...
1009s Processing triggers for libc-bin (2.41-1ubuntu1) ...
1014s autopkgtest [01:33:41]: test run-unit-test: [-----------------------
1014s ---asn2asn test---
1014s ---asn2all test---
1015s ---asn2fsa test---
1015s ---asn2gb test---
1015s ---asn2idx test---
1016s ---asn2xml test---
1016s ---cleanasn test---
1016s ---gene2xml test---
1017s ---vecscreen test---
1019s ---asndisc test---
1022s ---asnval test---
1022s ---asnmacro test---
1025s ---asntool test---
1025s ---indexpub test---
1025s ---getpub test---
1025s ---getmesh test---
1025s ---debruijn test---
1025s ---gil2bin test---
1025s ---makeset test---
1025s ---nps2gps test---
1025s [nps2gps] Processing X66994.1 (idfetch_g1234.npset)
1025s ---tbl2asn test---
1025s ---checksub test---
1025s ---fa2htgs test---
1025s ---subfuse test---
1025s ---trna2sap test---
1025s [subfuse] Processing checksub
1025s 
1025s [subfuse] Processing Sc_16
1025s 
1025s ---trna2tbl test---
1025s ---spidey test---
1025s autopkgtest [01:33:52]: test run-unit-test: -----------------------]
1026s autopkgtest [01:33:53]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
1026s run-unit-test        PASS
1026s autopkgtest [01:33:53]: @@@@@@@@@@@@@@@@@@@@ summary
1026s run-unit-test        PASS
1031s nova [W] Skipping flock for amd64
1031s Creating nova instance adt-plucky-amd64-ncbi-tools6-20250316-011647-juju-7f2275-prod-proposed-migration-environment-15-84228cd6-2875-4100-a4c5-0a000e7369f8 from image adt/ubuntu-plucky-amd64-server-20250304.img (UUID 9c7d4da5-d95f-4c85-ac1f-51eb37e75c4c)...
1031s nova [W] Timed out waiting for 10cb522a-a526-45d9-b896-a08eb76b27ee to get deleted.