2s autopkgtest [10:44:03]: starting date and time: 2025-03-13 10:44:03+0000
  3s autopkgtest [10:44:05]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
  3s autopkgtest [10:44:05]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.t56hw_5j/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:last-align --apt-upgrade nanook --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=last-align/1609-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@lcy02-7.secgroup --name adt-plucky-amd64-nanook-20250313-104345-juju-7f2275-prod-proposed-migration-environment-20-40b2df4c-b0bc-48cc-81b8-069849814bc5 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
262s autopkgtest [10:48:24]: testbed dpkg architecture: amd64
262s autopkgtest [10:48:24]: testbed apt version: 2.9.31ubuntu1
262s autopkgtest [10:48:24]: @@@@@@@@@@@@@@@@@@@@ test bed setup
262s autopkgtest [10:48:24]: testbed release detected to be: None
262s autopkgtest [10:48:24]: updating testbed package index (apt update)
262s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [110 kB]
262s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
262s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
262s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
262s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [11.5 kB]
263s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [396 kB]
263s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [43.9 kB]
263s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [61.3 kB]
263s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [47.7 kB]
263s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [162 kB]
263s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [348 kB]
263s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [7592 B]
263s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [3536 B]
263s Fetched 1192 kB in 0s (6596 kB/s)
264s Reading package lists...
264s Reading package lists...
264s Building dependency tree...
264s Reading state information...
264s Calculating upgrade...
264s Calculating upgrade...
265s The following package was automatically installed and is no longer required:
265s   libnl-genl-3-200
265s Use 'sudo apt autoremove' to remove it.
265s The following NEW packages will be installed:
265s   libdebuginfod-common libdebuginfod1t64 linux-headers-6.14.0-7
265s   linux-headers-6.14.0-7-generic linux-image-6.14.0-7-generic
265s   linux-modules-6.14.0-7-generic linux-modules-extra-6.14.0-7-generic
265s   linux-tools-6.14.0-7 linux-tools-6.14.0-7-generic pnp.ids
265s The following packages will be upgraded:
265s   apparmor apt apt-utils binutils binutils-common binutils-x86-64-linux-gnu
265s   curl dosfstools fwupd gir1.2-girepository-2.0 gir1.2-glib-2.0 htop hwdata
265s   libapparmor1 libapt-pkg7.0 libaudit-common libaudit1 libbinutils libbrotli1
265s   libcap-ng0 libctf-nobfd0 libctf0 libcurl3t64-gnutls libcurl4t64 libestr0
265s   libfwupd3 libgirepository-1.0-1 libglib2.0-0t64 libglib2.0-data libgprofng0
265s   libjemalloc2 liblz4-1 liblzma5 libncurses6 libncursesw6 libnl-3-200
265s   libnl-genl-3-200 libnl-route-3-200 libpci3 libpython3-stdlib libselinux1
265s   libsframe1 libsqlite3-0 libtinfo6 libxml2 linux-firmware linux-generic
265s   linux-headers-generic linux-headers-virtual linux-image-generic
265s   linux-image-virtual linux-libc-dev linux-tools-common linux-virtual
265s   media-types ncurses-base ncurses-bin ncurses-term pci.ids pciutils
265s   python-apt-common python3 python3-apt python3-cffi-backend python3-dbus
265s   python3-gi python3-lazr.uri python3-markupsafe python3-minimal
265s   python3-systemd python3-yaml rsync rsyslog xz-utils
265s 74 upgraded, 10 newly installed, 0 to remove and 0 not upgraded.
265s Need to get 797 MB of archives.
265s After this operation, 326 MB of additional disk space will be used.
265s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-bin amd64 6.5+20250216-2 [194 kB]
265s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-base all 6.5+20250216-2 [25.9 kB]
265s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-term all 6.5+20250216-2 [276 kB]
265s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 liblz4-1 amd64 1.10.0-4 [66.4 kB]
265s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma5 amd64 5.6.4-1 [157 kB]
265s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libapt-pkg7.0 amd64 2.9.32ubuntu1 [1138 kB]
265s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 apt amd64 2.9.32ubuntu1 [1439 kB]
265s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 apt-utils amd64 2.9.32ubuntu1 [222 kB]
265s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-minimal amd64 3.13.2-2 [27.7 kB]
265s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 python3 amd64 3.13.2-2 [24.0 kB]
265s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.4 kB]
265s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 rsync amd64 3.4.1+ds1-3 [482 kB]
265s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod-common all 0.192-4 [15.4 kB]
265s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit-common all 1:4.0.2-2ubuntu2 [6628 B]
265s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libcap-ng0 amd64 0.8.5-4build1 [15.6 kB]
265s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit1 amd64 1:4.0.2-2ubuntu2 [54.0 kB]
265s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libselinux1 amd64 3.7-3ubuntu3 [87.3 kB]
265s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses6 amd64 6.5+20250216-2 [126 kB]
265s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libncursesw6 amd64 6.5+20250216-2 [165 kB]
265s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libtinfo6 amd64 6.5+20250216-2 [119 kB]
265s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-girepository-2.0 amd64 1.83.4-1 [25.3 kB]
265s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-glib-2.0 amd64 2.84.0-1 [184 kB]
265s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-0t64 amd64 2.84.0-1 [1669 kB]
265s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libgirepository-1.0-1 amd64 1.83.4-1 [89.5 kB]
265s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libapparmor1 amd64 4.1.0~beta5-0ubuntu8 [55.0 kB]
265s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libestr0 amd64 0.1.11-2 [8340 B]
265s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-data all 2.84.0-1 [53.0 kB]
265s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libsqlite3-0 amd64 3.46.1-2 [715 kB]
265s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2ubuntu5 [772 kB]
265s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 media-types all 13.0.0 [29.9 kB]
265s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 python-apt-common all 2.9.9build1 [21.3 kB]
265s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-apt amd64 2.9.9build1 [172 kB]
265s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-cffi-backend amd64 1.17.1-2build2 [96.6 kB]
265s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dbus amd64 1.3.2-5build5 [102 kB]
265s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-4build1 [252 kB]
265s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-yaml amd64 6.0.2-1build2 [144 kB]
265s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 rsyslog amd64 8.2412.0-2ubuntu2 [555 kB]
265s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 apparmor amd64 4.1.0~beta5-0ubuntu8 [701 kB]
265s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 dosfstools amd64 4.2-1.2 [95.0 kB]
265s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-genl-3-200 amd64 3.7.0-1 [12.2 kB]
265s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-route-3-200 amd64 3.7.0-1 [191 kB]
265s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-3-200 amd64 3.7.0-1 [64.9 kB]
265s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 pci.ids all 0.0~2025.03.09-1 [285 kB]
265s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 pciutils amd64 1:3.13.0-2 [110 kB]
265s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libpci3 amd64 1:3.13.0-2 [39.8 kB]
265s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 xz-utils amd64 5.6.4-1 [278 kB]
265s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libgprofng0 amd64 2.44-3ubuntu1 [886 kB]
265s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf0 amd64 2.44-3ubuntu1 [96.5 kB]
265s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf-nobfd0 amd64 2.44-3ubuntu1 [98.9 kB]
265s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-x86-64-linux-gnu amd64 2.44-3ubuntu1 [1108 kB]
265s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libbinutils amd64 2.44-3ubuntu1 [585 kB]
265s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils amd64 2.44-3ubuntu1 [208 kB]
265s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-common amd64 2.44-3ubuntu1 [215 kB]
265s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libsframe1 amd64 2.44-3ubuntu1 [14.8 kB]
265s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libbrotli1 amd64 1.1.0-2build4 [365 kB]
265s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 curl amd64 8.12.1-3ubuntu1 [258 kB]
265s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4t64 amd64 8.12.1-3ubuntu1 [437 kB]
265s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl3t64-gnutls amd64 8.12.1-3ubuntu1 [432 kB]
265s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 fwupd amd64 2.0.6-4 [5408 kB]
265s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libfwupd3 amd64 2.0.6-4 [136 kB]
265s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 htop amd64 3.4.0-2 [195 kB]
265s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 hwdata all 0.393-3 [1562 B]
265s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 pnp.ids all 0.393-3 [29.5 kB]
265s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod1t64 amd64 0.192-4 [21.0 kB]
265s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libjemalloc2 amd64 5.3.0-3 [277 kB]
265s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-firmware amd64 20250310.git9e1370d3-0ubuntu1 [571 MB]
275s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-6.14.0-7-generic amd64 6.14.0-7.7 [41.2 MB]
276s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-6.14.0-7-generic amd64 6.14.0-7.7 [15.3 MB]
276s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-extra-6.14.0-7-generic amd64 6.14.0-7.7 [120 MB]
277s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-generic amd64 6.14.0-7.7+1 [1736 B]
277s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-generic amd64 6.14.0-7.7+1 [11.1 kB]
277s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-virtual amd64 6.14.0-7.7+1 [1724 B]
277s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-virtual amd64 6.14.0-7.7+1 [11.1 kB]
277s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-virtual amd64 6.14.0-7.7+1 [1648 B]
277s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-7 all 6.14.0-7.7 [14.2 MB]
278s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-7-generic amd64 6.14.0-7.7 [3859 kB]
278s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-generic amd64 6.14.0-7.7+1 [11.0 kB]
278s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-libc-dev amd64 6.14.0-7.7 [1723 kB]
278s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-common all 6.14.0-7.7 [521 kB]
278s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-7 amd64 6.14.0-7.7 [6147 kB]
278s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-7-generic amd64 6.14.0-7.7 [1612 B]
278s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lazr.uri all 1.0.6-6 [13.7 kB]
278s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-markupsafe amd64 2.1.5-1build4 [13.4 kB]
278s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-systemd amd64 235-1build6 [43.9 kB]
279s Preconfiguring packages ...
279s Fetched 797 MB in 14s (58.4 MB/s)
279s (Reading database ... 
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279s Preparing to unpack .../ncurses-bin_6.5+20250216-2_amd64.deb ...
279s Unpacking ncurses-bin (6.5+20250216-2) over (6.5+20250216-1) ...
279s Setting up ncurses-bin (6.5+20250216-2) ...
279s (Reading database ... 
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279s Preparing to unpack .../ncurses-base_6.5+20250216-2_all.deb ...
279s Unpacking ncurses-base (6.5+20250216-2) over (6.5+20250216-1) ...
279s Setting up ncurses-base (6.5+20250216-2) ...
279s (Reading database ... 
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279s Preparing to unpack .../ncurses-term_6.5+20250216-2_all.deb ...
279s Unpacking ncurses-term (6.5+20250216-2) over (6.5+20250216-1) ...
280s Preparing to unpack .../liblz4-1_1.10.0-4_amd64.deb ...
280s Unpacking liblz4-1:amd64 (1.10.0-4) over (1.10.0-3) ...
280s Setting up liblz4-1:amd64 (1.10.0-4) ...
280s (Reading database ... 
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280s Preparing to unpack .../liblzma5_5.6.4-1_amd64.deb ...
280s Unpacking liblzma5:amd64 (5.6.4-1) over (5.6.3-1) ...
280s Setting up liblzma5:amd64 (5.6.4-1) ...
280s (Reading database ... 
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280s Preparing to unpack .../libapt-pkg7.0_2.9.32ubuntu1_amd64.deb ...
280s Unpacking libapt-pkg7.0:amd64 (2.9.32ubuntu1) over (2.9.31ubuntu1) ...
280s Setting up libapt-pkg7.0:amd64 (2.9.32ubuntu1) ...
280s (Reading database ... 
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280s Preparing to unpack .../apt_2.9.32ubuntu1_amd64.deb ...
280s Unpacking apt (2.9.32ubuntu1) over (2.9.31ubuntu1) ...
281s Setting up apt (2.9.32ubuntu1) ...
281s (Reading database ... 
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281s Preparing to unpack .../apt-utils_2.9.32ubuntu1_amd64.deb ...
281s Unpacking apt-utils (2.9.32ubuntu1) over (2.9.31ubuntu1) ...
281s Preparing to unpack .../python3-minimal_3.13.2-2_amd64.deb ...
281s Unpacking python3-minimal (3.13.2-2) over (3.13.2-1) ...
281s Setting up python3-minimal (3.13.2-2) ...
282s (Reading database ... 
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282s Preparing to unpack .../python3_3.13.2-2_amd64.deb ...
282s Unpacking python3 (3.13.2-2) over (3.13.2-1) ...
282s Preparing to unpack .../libpython3-stdlib_3.13.2-2_amd64.deb ...
282s Unpacking libpython3-stdlib:amd64 (3.13.2-2) over (3.13.2-1) ...
282s Preparing to unpack .../rsync_3.4.1+ds1-3_amd64.deb ...
282s Unpacking rsync (3.4.1+ds1-3) over (3.4.1-0syncable1) ...
282s Selecting previously unselected package libdebuginfod-common.
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282s Preparing to unpack .../libaudit-common_1%3a4.0.2-2ubuntu2_all.deb ...
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282s Setting up libaudit-common (1:4.0.2-2ubuntu2) ...
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282s Preparing to unpack .../libaudit1_1%3a4.0.2-2ubuntu2_amd64.deb ...
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282s Setting up libaudit1:amd64 (1:4.0.2-2ubuntu2) ...
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282s Preparing to unpack .../libselinux1_3.7-3ubuntu3_amd64.deb ...
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282s Setting up libselinux1:amd64 (3.7-3ubuntu3) ...
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282s Preparing to unpack .../libncurses6_6.5+20250216-2_amd64.deb ...
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282s Preparing to unpack .../libtinfo6_6.5+20250216-2_amd64.deb ...
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282s Setting up libtinfo6:amd64 (6.5+20250216-2) ...
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282s Preparing to unpack .../00-gir1.2-girepository-2.0_1.83.4-1_amd64.deb ...
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283s Preparing to unpack .../04-libapparmor1_4.1.0~beta5-0ubuntu8_amd64.deb ...
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283s Preparing to unpack .../06-libglib2.0-data_2.84.0-1_all.deb ...
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284s Unpacking apparmor (4.1.0~beta5-0ubuntu8) over (4.1.0~beta5-0ubuntu6) ...
284s Preparing to unpack .../18-dosfstools_4.2-1.2_amd64.deb ...
284s Unpacking dosfstools (4.2-1.2) over (4.2-1.1build1) ...
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285s Preparing to unpack .../22-pci.ids_0.0~2025.03.09-1_all.deb ...
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285s Unpacking binutils-x86-64-linux-gnu (2.44-3ubuntu1) over (2.44-2ubuntu1) ...
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285s Unpacking libbrotli1:amd64 (1.1.0-2build4) over (1.1.0-2build3) ...
285s Preparing to unpack .../35-curl_8.12.1-3ubuntu1_amd64.deb ...
285s Unpacking curl (8.12.1-3ubuntu1) over (8.12.1-2ubuntu1) ...
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285s Preparing to unpack .../37-libcurl3t64-gnutls_8.12.1-3ubuntu1_amd64.deb ...
285s Unpacking libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) over (8.12.1-2ubuntu1) ...
285s Preparing to unpack .../38-fwupd_2.0.6-4_amd64.deb ...
285s Unpacking fwupd (2.0.6-4) over (2.0.6-3) ...
286s Preparing to unpack .../39-libfwupd3_2.0.6-4_amd64.deb ...
286s Unpacking libfwupd3:amd64 (2.0.6-4) over (2.0.6-3) ...
286s Preparing to unpack .../40-htop_3.4.0-2_amd64.deb ...
286s Unpacking htop (3.4.0-2) over (3.3.0-5) ...
286s Preparing to unpack .../41-hwdata_0.393-3_all.deb ...
286s Unpacking hwdata (0.393-3) over (0.393-1) ...
286s Selecting previously unselected package pnp.ids.
286s Preparing to unpack .../42-pnp.ids_0.393-3_all.deb ...
286s Unpacking pnp.ids (0.393-3) ...
286s Selecting previously unselected package libdebuginfod1t64:amd64.
286s Preparing to unpack .../43-libdebuginfod1t64_0.192-4_amd64.deb ...
286s Unpacking libdebuginfod1t64:amd64 (0.192-4) ...
286s Preparing to unpack .../44-libjemalloc2_5.3.0-3_amd64.deb ...
286s Unpacking libjemalloc2:amd64 (5.3.0-3) over (5.3.0-2build1) ...
286s Preparing to unpack .../45-linux-firmware_20250310.git9e1370d3-0ubuntu1_amd64.deb ...
286s Unpacking linux-firmware (20250310.git9e1370d3-0ubuntu1) over (20250204.git0fd450ee-0ubuntu1) ...
289s Selecting previously unselected package linux-modules-6.14.0-7-generic.
289s Preparing to unpack .../46-linux-modules-6.14.0-7-generic_6.14.0-7.7_amd64.deb ...
289s Unpacking linux-modules-6.14.0-7-generic (6.14.0-7.7) ...
289s Selecting previously unselected package linux-image-6.14.0-7-generic.
289s Preparing to unpack .../47-linux-image-6.14.0-7-generic_6.14.0-7.7_amd64.deb ...
289s Unpacking linux-image-6.14.0-7-generic (6.14.0-7.7) ...
289s Selecting previously unselected package linux-modules-extra-6.14.0-7-generic.
289s Preparing to unpack .../48-linux-modules-extra-6.14.0-7-generic_6.14.0-7.7_amd64.deb ...
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290s Preparing to unpack .../49-linux-generic_6.14.0-7.7+1_amd64.deb ...
290s Unpacking linux-generic (6.14.0-7.7+1) over (6.12.0-16.16+2) ...
291s Preparing to unpack .../50-linux-image-generic_6.14.0-7.7+1_amd64.deb ...
291s Unpacking linux-image-generic (6.14.0-7.7+1) over (6.12.0-16.16+2) ...
291s Preparing to unpack .../51-linux-virtual_6.14.0-7.7+1_amd64.deb ...
291s Unpacking linux-virtual (6.14.0-7.7+1) over (6.12.0-16.16+2) ...
291s Preparing to unpack .../52-linux-image-virtual_6.14.0-7.7+1_amd64.deb ...
291s Unpacking linux-image-virtual (6.14.0-7.7+1) over (6.12.0-16.16+2) ...
291s Preparing to unpack .../53-linux-headers-virtual_6.14.0-7.7+1_amd64.deb ...
291s Unpacking linux-headers-virtual (6.14.0-7.7+1) over (6.12.0-16.16+2) ...
291s Selecting previously unselected package linux-headers-6.14.0-7.
291s Preparing to unpack .../54-linux-headers-6.14.0-7_6.14.0-7.7_all.deb ...
291s Unpacking linux-headers-6.14.0-7 (6.14.0-7.7) ...
293s Selecting previously unselected package linux-headers-6.14.0-7-generic.
293s Preparing to unpack .../55-linux-headers-6.14.0-7-generic_6.14.0-7.7_amd64.deb ...
293s Unpacking linux-headers-6.14.0-7-generic (6.14.0-7.7) ...
295s Preparing to unpack .../56-linux-headers-generic_6.14.0-7.7+1_amd64.deb ...
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295s Preparing to unpack .../57-linux-libc-dev_6.14.0-7.7_amd64.deb ...
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295s Preparing to unpack .../58-linux-tools-common_6.14.0-7.7_all.deb ...
295s Unpacking linux-tools-common (6.14.0-7.7) over (6.12.0-16.16) ...
295s Selecting previously unselected package linux-tools-6.14.0-7.
295s Preparing to unpack .../59-linux-tools-6.14.0-7_6.14.0-7.7_amd64.deb ...
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295s Selecting previously unselected package linux-tools-6.14.0-7-generic.
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295s Preparing to unpack .../61-python3-lazr.uri_1.0.6-6_all.deb ...
295s Unpacking python3-lazr.uri (1.0.6-6) over (1.0.6-5) ...
295s Preparing to unpack .../62-python3-markupsafe_2.1.5-1build4_amd64.deb ...
295s Unpacking python3-markupsafe (2.1.5-1build4) over (2.1.5-1build3) ...
295s Preparing to unpack .../63-python3-systemd_235-1build6_amd64.deb ...
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296s Setting up media-types (13.0.0) ...
296s Installing new version of config file /etc/mime.types ...
296s Setting up linux-modules-6.14.0-7-generic (6.14.0-7.7) ...
298s Setting up libapparmor1:amd64 (4.1.0~beta5-0ubuntu8) ...
298s Setting up pci.ids (0.0~2025.03.09-1) ...
298s Setting up apt-utils (2.9.32ubuntu1) ...
298s Setting up libdebuginfod-common (0.192-4) ...
298s Setting up linux-firmware (20250310.git9e1370d3-0ubuntu1) ...
298s Setting up libestr0:amd64 (0.1.11-2) ...
298s Setting up libbrotli1:amd64 (1.1.0-2build4) ...
298s Setting up libsqlite3-0:amd64 (3.46.1-2) ...
298s Setting up dosfstools (4.2-1.2) ...
298s Setting up rsyslog (8.2412.0-2ubuntu2) ...
298s info: The user `syslog' is already a member of `adm'.
299s Setting up binutils-common:amd64 (2.44-3ubuntu1) ...
299s Setting up libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) ...
299s Setting up linux-libc-dev:amd64 (6.14.0-7.7) ...
299s Setting up libctf-nobfd0:amd64 (2.44-3ubuntu1) ...
299s Setting up libjemalloc2:amd64 (5.3.0-3) ...
299s Setting up libsframe1:amd64 (2.44-3ubuntu1) ...
299s Setting up linux-modules-extra-6.14.0-7-generic (6.14.0-7.7) ...
301s Setting up apparmor (4.1.0~beta5-0ubuntu8) ...
301s Installing new version of config file /etc/apparmor.d/openvpn ...
302s Reloading AppArmor profiles 
303s Setting up libglib2.0-0t64:amd64 (2.84.0-1) ...
303s No schema files found: doing nothing.
303s Setting up libglib2.0-data (2.84.0-1) ...
303s Setting up linux-headers-6.14.0-7 (6.14.0-7.7) ...
303s Setting up libncurses6:amd64 (6.5+20250216-2) ...
303s Setting up xz-utils (5.6.4-1) ...
303s Setting up linux-image-6.14.0-7-generic (6.14.0-7.7) ...
305s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.12.0-16-generic
305s I: /boot/initrd.img.old is now a symlink to initrd.img-6.12.0-16-generic
305s I: /boot/vmlinuz is now a symlink to vmlinuz-6.14.0-7-generic
305s I: /boot/initrd.img is now a symlink to initrd.img-6.14.0-7-generic
305s Setting up gir1.2-glib-2.0:amd64 (2.84.0-1) ...
305s Setting up libncursesw6:amd64 (6.5+20250216-2) ...
305s Setting up libpci3:amd64 (1:3.13.0-2) ...
305s Setting up python-apt-common (2.9.9build1) ...
305s Setting up pnp.ids (0.393-3) ...
305s Setting up libnl-3-200:amd64 (3.7.0-1) ...
305s Setting up libgirepository-1.0-1:amd64 (1.83.4-1) ...
305s Setting up linux-image-virtual (6.14.0-7.7+1) ...
305s Setting up libbinutils:amd64 (2.44-3ubuntu1) ...
305s Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2ubuntu5) ...
305s Setting up rsync (3.4.1+ds1-3) ...
306s rsync.service is a disabled or a static unit not running, not starting it.
306s Setting up libpython3-stdlib:amd64 (3.13.2-2) ...
306s Setting up ncurses-term (6.5+20250216-2) ...
306s Setting up libctf0:amd64 (2.44-3ubuntu1) ...
306s Setting up libdebuginfod1t64:amd64 (0.192-4) ...
306s Setting up linux-image-generic (6.14.0-7.7+1) ...
306s Setting up libcurl4t64:amd64 (8.12.1-3ubuntu1) ...
306s Setting up htop (3.4.0-2) ...
306s Setting up linux-headers-6.14.0-7-generic (6.14.0-7.7) ...
306s Setting up libfwupd3:amd64 (2.0.6-4) ...
306s Setting up python3 (3.13.2-2) ...
306s Setting up linux-headers-generic (6.14.0-7.7+1) ...
306s Setting up python3-markupsafe (2.1.5-1build4) ...
307s Setting up libnl-route-3-200:amd64 (3.7.0-1) ...
307s Setting up hwdata (0.393-3) ...
307s Setting up libgprofng0:amd64 (2.44-3ubuntu1) ...
307s Setting up gir1.2-girepository-2.0:amd64 (1.83.4-1) ...
307s Setting up python3-gi (3.50.0-4build1) ...
307s Setting up pciutils (1:3.13.0-2) ...
307s Setting up libnl-genl-3-200:amd64 (3.7.0-1) ...
307s Setting up curl (8.12.1-3ubuntu1) ...
307s Setting up linux-tools-common (6.14.0-7.7) ...
307s Setting up fwupd (2.0.6-4) ...
307s fwupd-refresh.service is a disabled or a static unit not running, not starting it.
308s Setting up python3-systemd (235-1build6) ...
308s Setting up python3-cffi-backend:amd64 (1.17.1-2build2) ...
308s Setting up binutils-x86-64-linux-gnu (2.44-3ubuntu1) ...
308s Setting up python3-dbus (1.3.2-5build5) ...
308s Setting up linux-headers-virtual (6.14.0-7.7+1) ...
308s Setting up linux-generic (6.14.0-7.7+1) ...
308s Setting up python3-apt (2.9.9build1) ...
308s Setting up python3-yaml (6.0.2-1build2) ...
308s Setting up python3-lazr.uri (1.0.6-6) ...
308s Setting up binutils (2.44-3ubuntu1) ...
308s Setting up linux-virtual (6.14.0-7.7+1) ...
308s Setting up linux-tools-6.14.0-7 (6.14.0-7.7) ...
308s Setting up linux-tools-6.14.0-7-generic (6.14.0-7.7) ...
308s Processing triggers for systemd (257.3-1ubuntu3) ...
308s Processing triggers for man-db (2.13.0-1) ...
310s Processing triggers for dbus (1.16.2-1ubuntu1) ...
310s Processing triggers for libc-bin (2.41-1ubuntu1) ...
310s Processing triggers for initramfs-tools (0.146ubuntu1) ...
310s update-initramfs: Generating /boot/initrd.img-6.12.0-16-generic
310s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
321s Processing triggers for linux-image-6.14.0-7-generic (6.14.0-7.7) ...
321s /etc/kernel/postinst.d/initramfs-tools:
321s update-initramfs: Generating /boot/initrd.img-6.14.0-7-generic
321s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
330s /etc/kernel/postinst.d/zz-update-grub:
330s Sourcing file `/etc/default/grub'
330s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
330s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg'
330s Generating grub configuration file ...
330s Found linux image: /boot/vmlinuz-6.14.0-7-generic
330s Found initrd image: /boot/initrd.img-6.14.0-7-generic
330s Found linux image: /boot/vmlinuz-6.12.0-16-generic
330s Found initrd image: /boot/initrd.img-6.12.0-16-generic
330s Found linux image: /boot/vmlinuz-6.11.0-8-generic
330s Found initrd image: /boot/initrd.img-6.11.0-8-generic
331s Warning: os-prober will not be executed to detect other bootable partitions.
331s Systems on them will not be added to the GRUB boot configuration.
331s Check GRUB_DISABLE_OS_PROBER documentation entry.
331s Adding boot menu entry for UEFI Firmware Settings ...
331s done
332s Reading package lists...
332s Building dependency tree...
332s Reading state information...
332s Solving dependencies...
332s The following packages will be REMOVED:
332s   libnl-genl-3-200* libnsl2* libpython3.12-minimal* libpython3.12-stdlib*
332s   libpython3.12t64* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
332s   linux-image-6.11.0-8-generic* linux-modules-6.11.0-8-generic*
332s   linux-tools-6.11.0-8* linux-tools-6.11.0-8-generic*
333s 0 upgraded, 0 newly installed, 11 to remove and 0 not upgraded.
333s After this operation, 225 MB disk space will be freed.
333s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 148650 files and directories currently installed.)
333s Removing libnl-genl-3-200:amd64 (3.7.0-1) ...
333s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ...
333s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ...
333s Removing libpython3.12t64:amd64 (3.12.9-1) ...
333s Removing libpython3.12-stdlib:amd64 (3.12.9-1) ...
333s Removing libnsl2:amd64 (1.3.0-3build3) ...
333s Removing libpython3.12-minimal:amd64 (3.12.9-1) ...
333s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
334s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
335s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ...
336s /etc/kernel/postrm.d/initramfs-tools:
336s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic
336s /etc/kernel/postrm.d/zz-update-grub:
336s Sourcing file `/etc/default/grub'
336s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
336s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg'
336s Generating grub configuration file ...
336s Found linux image: /boot/vmlinuz-6.14.0-7-generic
336s Found initrd image: /boot/initrd.img-6.14.0-7-generic
336s Found linux image: /boot/vmlinuz-6.12.0-16-generic
336s Found initrd image: /boot/initrd.img-6.12.0-16-generic
336s Warning: os-prober will not be executed to detect other bootable partitions.
336s Systems on them will not be added to the GRUB boot configuration.
336s Check GRUB_DISABLE_OS_PROBER documentation entry.
336s Adding boot menu entry for UEFI Firmware Settings ...
336s done
336s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
336s Processing triggers for libc-bin (2.41-1ubuntu1) ...
337s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 115819 files and directories currently installed.)
337s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ...
337s Purging configuration files for libpython3.12-minimal:amd64 (3.12.9-1) ...
337s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
337s autopkgtest [10:49:39]: upgrading testbed (apt dist-upgrade and autopurge)
337s Reading package lists...
337s Building dependency tree...
337s Reading state information...
338s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
338s Starting 2 pkgProblemResolver with broken count: 0
338s Done
338s Entering ResolveByKeep
338s 
338s Calculating upgrade...
339s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
339s Reading package lists...
339s Building dependency tree...
339s Reading state information...
339s Starting pkgProblemResolver with broken count: 0
339s Starting 2 pkgProblemResolver with broken count: 0
339s Done
340s Solving dependencies...
340s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
340s autopkgtest [10:49:42]: rebooting testbed after setup commands that affected boot
344s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds...
355s autopkgtest [10:49:57]: testbed running kernel: Linux 6.14.0-7-generic #7-Ubuntu SMP PREEMPT_DYNAMIC Fri Feb 28 12:14:20 UTC 2025
356s autopkgtest [10:49:58]: @@@@@@@@@@@@@@@@@@@@ apt-source nanook
357s Get:1 http://ftpmaster.internal/ubuntu plucky/universe nanook 1.33+dfsg-6 (dsc) [2220 B]
357s Get:2 http://ftpmaster.internal/ubuntu plucky/universe nanook 1.33+dfsg-6 (tar) [95.2 kB]
357s Get:3 http://ftpmaster.internal/ubuntu plucky/universe nanook 1.33+dfsg-6 (diff) [1818 kB]
357s gpgv: Signature made Wed Dec 18 14:21:48 2024 UTC
357s gpgv:                using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA
357s gpgv:                issuer "emollier@debian.org"
357s gpgv: Can't check signature: No public key
357s dpkg-source: warning: cannot verify inline signature for ./nanook_1.33+dfsg-6.dsc: no acceptable signature found
357s autopkgtest [10:49:59]: testing package nanook version 1.33+dfsg-6
357s autopkgtest [10:49:59]: build not needed
357s autopkgtest [10:49:59]: test run-unit-test: preparing testbed
357s Reading package lists...
358s Building dependency tree...
358s Reading state information...
358s Starting pkgProblemResolver with broken count: 0
358s Starting 2 pkgProblemResolver with broken count: 0
358s Done
359s The following NEW packages will be installed:
359s   ca-certificates-java default-jre-headless fontconfig fontconfig-config
359s   fonts-dejavu-core fonts-dejavu-mono fonts-lmodern hdf5-tools java-common
359s   last-align libaec0 libapache-pom-java libblas3 libcairo2 libcommons-io-java
359s   libcommons-parent-java libdatrie1 libdeflate0 libfontconfig1 libgfortran5
359s   libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-310 libhdf5-hl-310 libice6
359s   libjbig0 libjpeg-turbo8 libjpeg8 libkpathsea6 liblapack3 liblcms2-2 liblerc4
359s   libmpfi0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
359s   libpaper2 libpcsclite1 libpixman-1-0 libpotrace0 libptexenc1 libsharpyuv0
359s   libsm6 libsynctex2 libsz2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data
359s   libthai0 libtiff6 libtk8.6 libwebp7 libxaw7 libxcb-render0 libxcb-shm0
359s   libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6t64 libzzip-0-13t64
359s   littler nanook nanook-examples openjdk-21-jre-headless r-base-core
359s   r-cran-cli r-cran-colorspace r-cran-fansi r-cran-farver r-cran-ggplot2
359s   r-cran-glue r-cran-gridextra r-cran-gtable r-cran-isoband r-cran-labeling
359s   r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass
359s   r-cran-matrix r-cran-mgcv r-cran-munsell r-cran-nlme r-cran-pillar
359s   r-cran-pkgconfig r-cran-pkgkitten r-cran-plyr r-cran-r6 r-cran-rcolorbrewer
359s   r-cran-rcpp r-cran-reshape r-cran-rlang r-cran-scales r-cran-tibble
359s   r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-withr t1utils tex-common
359s   texlive-base texlive-binaries texlive-latex-base unzip x11-common xdg-utils
359s   zip
359s 0 upgraded, 114 newly installed, 0 to remove and 0 not upgraded.
359s Need to get 168 MB of archives.
359s After this operation, 486 MB of additional disk space will be used.
359s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 ca-certificates-java all 20240118 [11.6 kB]
359s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 java-common all 0.76 [6852 B]
359s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 liblcms2-2 amd64 2.16-2 [212 kB]
359s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB]
359s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B]
359s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcsclite1 amd64 2.3.1-1 [26.6 kB]
359s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 openjdk-21-jre-headless amd64 21.0.6+7-1 [46.4 MB]
359s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 default-jre-headless amd64 2:1.21-76 [3178 B]
359s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB]
359s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB]
359s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-2ubuntu1 [37.4 kB]
359s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-2ubuntu1 [164 kB]
359s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-2ubuntu1 [180 kB]
359s Get:14 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-lmodern all 2.005-1 [4799 kB]
359s Get:15 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB]
359s Get:16 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B]
359s Get:17 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-310 amd64 1.14.5+repack-3 [1519 kB]
359s Get:18 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-310 amd64 1.14.5+repack-3 [62.6 kB]
359s Get:19 http://ftpmaster.internal/ubuntu plucky/universe amd64 hdf5-tools amd64 1.14.5+repack-3 [401 kB]
359s Get:20 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 last-align amd64 1609-1 [1686 kB]
359s Get:21 http://ftpmaster.internal/ubuntu plucky/universe amd64 libapache-pom-java all 33-2 [5874 B]
359s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.1-2 [359 kB]
359s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB]
359s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB]
359s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B]
359s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB]
359s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB]
359s Get:28 http://ftpmaster.internal/ubuntu plucky/universe amd64 libcommons-parent-java all 56-1 [10.7 kB]
359s Get:29 http://ftpmaster.internal/ubuntu plucky/universe amd64 libcommons-io-java all 2.18.0-1 [477 kB]
359s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB]
359s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB]
359s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 15-20250222-0ubuntu1 [919 kB]
359s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 15-20250222-0ubuntu1 [148 kB]
359s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB]
359s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB]
359s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB]
359s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB]
359s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libkpathsea6 amd64 2024.20240313.70630+ds-5build2 [67.0 kB]
359s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB]
359s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB]
359s Get:41 http://ftpmaster.internal/ubuntu plucky/universe amd64 libmpfi0 amd64 1.5.4+ds-4 [35.5 kB]
359s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB]
359s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB]
359s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.56.1-1 [255 kB]
359s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.56.1-1 [52.6 kB]
359s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.56.1-1 [29.1 kB]
359s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB]
359s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB]
359s Get:49 http://ftpmaster.internal/ubuntu plucky/universe amd64 libpotrace0 amd64 1.16-2build1 [17.7 kB]
359s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libptexenc1 amd64 2024.20240313.70630+ds-5build2 [43.7 kB]
359s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB]
359s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB]
360s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libsynctex2 amd64 2024.20240313.70630+ds-5build2 [62.5 kB]
360s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB]
360s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 libteckit0 amd64 2.5.12+ds1-1 [411 kB]
360s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libtexlua53-5 amd64 2024.20240313.70630+ds-5build2 [145 kB]
360s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB]
360s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB]
360s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB]
360s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB]
360s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B]
360s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB]
360s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB]
360s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libxmu6 amd64 2:1.1.3-3build2 [47.6 kB]
360s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libxpm4 amd64 1:3.5.17-1build2 [36.5 kB]
360s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libxaw7 amd64 2:1.0.16-1 [207 kB]
360s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libxi6 amd64 2:1.8.2-1 [32.4 kB]
360s Get:68 http://ftpmaster.internal/ubuntu plucky/universe amd64 libzzip-0-13t64 amd64 0.13.78+dfsg.1-0.1 [30.0 kB]
360s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 zip amd64 3.0-14ubuntu2 [185 kB]
360s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB]
360s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
360s Get:72 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-base-core amd64 4.4.3-1 [28.9 MB]
360s Get:73 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-littler amd64 0.3.20-2 [96.6 kB]
360s Get:74 http://ftpmaster.internal/ubuntu plucky/universe amd64 littler all 0.3.20-2 [2554 B]
360s Get:75 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB]
360s Get:76 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB]
360s Get:77 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rlang amd64 1.1.5-1 [1719 kB]
360s Get:78 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
360s Get:79 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB]
360s Get:80 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB]
360s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mass amd64 7.3-64-1 [1114 kB]
360s Get:82 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB]
360s Get:83 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-nlme amd64 3.1.167-1 [2320 kB]
360s Get:84 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-matrix amd64 1.7-2-1 [4456 kB]
360s Get:85 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB]
360s Get:86 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB]
360s Get:87 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB]
360s Get:88 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-colorspace amd64 2.1-1+dfsg-1 [1563 kB]
361s Get:89 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-munsell all 0.5.1-1 [213 kB]
361s Get:90 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB]
361s Get:91 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB]
361s Get:92 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-viridislite all 0.4.2-2 [1088 kB]
361s Get:93 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-scales all 1.3.0-1 [603 kB]
361s Get:94 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB]
361s Get:95 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB]
361s Get:96 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB]
361s Get:97 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB]
361s Get:98 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pillar all 1.10.1+dfsg-1 [453 kB]
361s Get:99 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB]
361s Get:100 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB]
361s Get:101 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
361s Get:102 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB]
361s Get:103 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-gridextra all 2.3-3build1 [1024 kB]
361s Get:104 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
361s Get:105 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-rcpp amd64 1.0.14-1 [1998 kB]
361s Get:106 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB]
361s Get:107 http://ftpmaster.internal/ubuntu plucky/universe amd64 r-cran-reshape all 0.8.9-1 [168 kB]
361s Get:108 http://ftpmaster.internal/ubuntu plucky/universe amd64 tex-common all 6.19 [29.8 kB]
361s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 t1utils amd64 1.41-4build3 [61.3 kB]
361s Get:110 http://ftpmaster.internal/ubuntu plucky/universe amd64 texlive-binaries amd64 2024.20240313.70630+ds-5build2 [9799 kB]
361s Get:111 http://ftpmaster.internal/ubuntu plucky/universe amd64 texlive-base all 2024.20250114-1 [22.5 MB]
361s Get:112 http://ftpmaster.internal/ubuntu plucky/universe amd64 texlive-latex-base all 2024.20250114-1 [1264 kB]
361s Get:113 http://ftpmaster.internal/ubuntu plucky/universe amd64 nanook all 1.33+dfsg-6 [195 kB]
361s Get:114 http://ftpmaster.internal/ubuntu plucky/universe amd64 nanook-examples all 1.33+dfsg-6 [1814 kB]
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364s Selecting previously unselected package libdatrie1:amd64.
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365s Selecting previously unselected package libjbig0:amd64.
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365s Selecting previously unselected package libtiff6:amd64.
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365s Selecting previously unselected package libtk8.6:amd64.
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365s Selecting previously unselected package libxpm4:amd64.
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366s Selecting previously unselected package libxaw7:amd64.
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366s Selecting previously unselected package r-base-core.
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366s Selecting previously unselected package r-cran-littler.
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367s Selecting previously unselected package r-cran-farver.
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367s Selecting previously unselected package r-cran-labeling.
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367s Selecting previously unselected package r-cran-colorspace.
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367s Selecting previously unselected package r-cran-munsell.
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367s Unpacking r-cran-munsell (0.5.1-1) ...
367s Selecting previously unselected package r-cran-r6.
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367s Selecting previously unselected package r-cran-rcolorbrewer.
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367s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ...
367s Selecting previously unselected package r-cran-viridislite.
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367s Unpacking r-cran-viridislite (0.4.2-2) ...
367s Selecting previously unselected package r-cran-scales.
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367s Unpacking r-cran-scales (1.3.0-1) ...
367s Selecting previously unselected package r-cran-fansi.
367s Preparing to unpack .../093-r-cran-fansi_1.0.5-1_amd64.deb ...
367s Unpacking r-cran-fansi (1.0.5-1) ...
367s Selecting previously unselected package r-cran-magrittr.
367s Preparing to unpack .../094-r-cran-magrittr_2.0.3-1_amd64.deb ...
367s Unpacking r-cran-magrittr (2.0.3-1) ...
367s Selecting previously unselected package r-cran-utf8.
367s Preparing to unpack .../095-r-cran-utf8_1.2.4-1_amd64.deb ...
367s Unpacking r-cran-utf8 (1.2.4-1) ...
367s Selecting previously unselected package r-cran-vctrs.
367s Preparing to unpack .../096-r-cran-vctrs_0.6.5-1_amd64.deb ...
367s Unpacking r-cran-vctrs (0.6.5-1) ...
367s Selecting previously unselected package r-cran-pillar.
367s Preparing to unpack .../097-r-cran-pillar_1.10.1+dfsg-1_all.deb ...
367s Unpacking r-cran-pillar (1.10.1+dfsg-1) ...
367s Selecting previously unselected package r-cran-pkgconfig.
367s Preparing to unpack .../098-r-cran-pkgconfig_2.0.3-2build1_all.deb ...
367s Unpacking r-cran-pkgconfig (2.0.3-2build1) ...
367s Selecting previously unselected package r-cran-tibble.
367s Preparing to unpack .../099-r-cran-tibble_3.2.1+dfsg-3_amd64.deb ...
367s Unpacking r-cran-tibble (3.2.1+dfsg-3) ...
367s Selecting previously unselected package r-cran-withr.
367s Preparing to unpack .../100-r-cran-withr_3.0.2+dfsg-1_all.deb ...
367s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
367s Selecting previously unselected package r-cran-ggplot2.
367s Preparing to unpack .../101-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ...
367s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ...
368s Selecting previously unselected package r-cran-gridextra.
368s Preparing to unpack .../102-r-cran-gridextra_2.3-3build1_all.deb ...
368s Unpacking r-cran-gridextra (2.3-3build1) ...
368s Selecting previously unselected package r-cran-pkgkitten.
368s Preparing to unpack .../103-r-cran-pkgkitten_0.2.4-1_all.deb ...
368s Unpacking r-cran-pkgkitten (0.2.4-1) ...
368s Selecting previously unselected package r-cran-rcpp.
368s Preparing to unpack .../104-r-cran-rcpp_1.0.14-1_amd64.deb ...
368s Unpacking r-cran-rcpp (1.0.14-1) ...
368s Selecting previously unselected package r-cran-plyr.
368s Preparing to unpack .../105-r-cran-plyr_1.8.9-1_amd64.deb ...
368s Unpacking r-cran-plyr (1.8.9-1) ...
368s Selecting previously unselected package r-cran-reshape.
368s Preparing to unpack .../106-r-cran-reshape_0.8.9-1_all.deb ...
368s Unpacking r-cran-reshape (0.8.9-1) ...
368s Selecting previously unselected package tex-common.
368s Preparing to unpack .../107-tex-common_6.19_all.deb ...
368s Unpacking tex-common (6.19) ...
368s Selecting previously unselected package t1utils.
368s Preparing to unpack .../108-t1utils_1.41-4build3_amd64.deb ...
368s Unpacking t1utils (1.41-4build3) ...
368s Selecting previously unselected package texlive-binaries.
368s Preparing to unpack .../109-texlive-binaries_2024.20240313.70630+ds-5build2_amd64.deb ...
368s Unpacking texlive-binaries (2024.20240313.70630+ds-5build2) ...
368s Selecting previously unselected package texlive-base.
368s Preparing to unpack .../110-texlive-base_2024.20250114-1_all.deb ...
368s Unpacking texlive-base (2024.20250114-1) ...
369s Selecting previously unselected package texlive-latex-base.
369s Preparing to unpack .../111-texlive-latex-base_2024.20250114-1_all.deb ...
369s Unpacking texlive-latex-base (2024.20250114-1) ...
369s Selecting previously unselected package nanook.
369s Preparing to unpack .../112-nanook_1.33+dfsg-6_all.deb ...
369s Unpacking nanook (1.33+dfsg-6) ...
369s Selecting previously unselected package nanook-examples.
370s Preparing to unpack .../113-nanook-examples_1.33+dfsg-6_all.deb ...
370s Unpacking nanook-examples (1.33+dfsg-6) ...
370s Setting up libgraphite2-3:amd64 (1.3.14-2ubuntu1) ...
370s Setting up liblcms2-2:amd64 (2.16-2) ...
370s Setting up libpixman-1-0:amd64 (0.44.0-3) ...
370s Setting up libsharpyuv0:amd64 (1.5.0-0.1) ...
370s Setting up nanook-examples (1.33+dfsg-6) ...
370s Setting up liblerc4:amd64 (4.0.0+ds-5ubuntu1) ...
370s Setting up libxpm4:amd64 (1:3.5.17-1build2) ...
370s Setting up libxi6:amd64 (2:1.8.2-1) ...
370s Setting up java-common (0.76) ...
370s Setting up libxrender1:amd64 (1:0.9.10-1.1build1) ...
370s Setting up libdatrie1:amd64 (0.2.13-3build1) ...
370s Setting up libxcb-render0:amd64 (1.17.0-2) ...
370s Setting up unzip (6.0-28ubuntu6) ...
370s Setting up x11-common (1:7.7+23ubuntu3) ...
370s Setting up libdeflate0:amd64 (1.23-1) ...
370s Setting up libxcb-shm0:amd64 (1.17.0-2) ...
370s Setting up libgomp1:amd64 (15-20250222-0ubuntu1) ...
370s Setting up libjbig0:amd64 (2.1-6.1ubuntu2) ...
370s Setting up libaec0:amd64 (1.1.3-1) ...
370s Setting up last-align (1609-1) ...
370s Setting up tex-common (6.19) ...
370s update-language: texlive-base not installed and configured, doing nothing!
370s Setting up zip (3.0-14ubuntu2) ...
370s Setting up libblas3:amd64 (3.12.1-2) ...
370s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
370s Setting up libzzip-0-13t64:amd64 (0.13.78+dfsg.1-0.1) ...
370s Setting up libteckit0:amd64 (2.5.12+ds1-1) ...
370s Setting up libapache-pom-java (33-2) ...
370s Setting up t1utils (1.41-4build3) ...
370s Setting up libtexlua53-5:amd64 (2024.20240313.70630+ds-5build2) ...
370s Setting up fonts-dejavu-mono (2.37-8) ...
370s Setting up libtcl8.6:amd64 (8.6.16+dfsg-1) ...
370s Setting up libmpfi0:amd64 (1.5.4+ds-4) ...
370s Setting up fonts-dejavu-core (2.37-8) ...
370s Setting up libpcsclite1:amd64 (2.3.1-1) ...
370s Setting up libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ...
370s Setting up libkpathsea6:amd64 (2024.20240313.70630+ds-5build2) ...
370s Setting up libgfortran5:amd64 (15-20250222-0ubuntu1) ...
370s Setting up libwebp7:amd64 (1.5.0-0.1) ...
370s Setting up fonts-lmodern (2.005-1) ...
370s Setting up libharfbuzz0b:amd64 (10.2.0-1) ...
370s Setting up libthai-data (0.1.29-2build1) ...
370s Setting up libxss1:amd64 (1:1.2.3-1build3) ...
370s Setting up libpaper2:amd64 (2.2.5-0.3) ...
370s Setting up ca-certificates-java (20240118) ...
370s No JRE found. Skipping Java certificates setup.
370s Setting up xdg-utils (1.2.1-2ubuntu1) ...
370s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
370s Setting up libsz2:amd64 (1.1.3-1) ...
370s Setting up libsynctex2:amd64 (2024.20240313.70630+ds-5build2) ...
370s Setting up libpotrace0:amd64 (1.16-2build1) ...
370s Setting up libjpeg8:amd64 (8c-2ubuntu11) ...
370s Setting up libice6:amd64 (2:1.1.1-1) ...
370s Setting up liblapack3:amd64 (3.12.1-2) ...
370s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
370s Setting up openjdk-21-jre-headless:amd64 (21.0.6+7-1) ...
370s update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode
370s update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode
370s update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode
370s update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode
370s update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode
370s Setting up fontconfig-config (2.15.0-2ubuntu1) ...
371s Setting up libcommons-parent-java (56-1) ...
371s Setting up libpaper-utils (2.2.5-0.3) ...
371s Setting up libthai0:amd64 (0.1.29-2build1) ...
371s Setting up libptexenc1:amd64 (2024.20240313.70630+ds-5build2) ...
371s Setting up libhdf5-310:amd64 (1.14.5+repack-3) ...
371s Setting up libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ...
371s Setting up libfontconfig1:amd64 (2.15.0-2ubuntu1) ...
371s Setting up libsm6:amd64 (2:1.2.4-1) ...
371s Setting up libhdf5-hl-310:amd64 (1.14.5+repack-3) ...
371s Setting up fontconfig (2.15.0-2ubuntu1) ...
373s Regenerating fonts cache... done.
373s Setting up libxft2:amd64 (2.3.6-1build1) ...
373s Setting up libcommons-io-java (2.18.0-1) ...
373s Setting up libtk8.6:amd64 (8.6.16-1) ...
373s Setting up libpango-1.0-0:amd64 (1.56.1-1) ...
373s Setting up libcairo2:amd64 (1.18.2-2) ...
373s Setting up hdf5-tools (1.14.5+repack-3) ...
373s Setting up libxt6t64:amd64 (1:1.2.1-1.2build1) ...
373s Setting up libpangoft2-1.0-0:amd64 (1.56.1-1) ...
373s Setting up libpangocairo-1.0-0:amd64 (1.56.1-1) ...
373s Setting up libxmu6:amd64 (2:1.1.3-3build2) ...
373s Setting up libxaw7:amd64 (2:1.0.16-1) ...
373s Setting up r-base-core (4.4.3-1) ...
373s Creating config file /etc/R/Renviron with new version
373s Setting up r-cran-labeling (0.4.3-1) ...
373s Setting up r-cran-lattice (0.22-6-1) ...
373s Setting up r-cran-nlme (3.1.167-1) ...
373s Setting up r-cran-farver (2.1.2-1) ...
373s Setting up r-cran-viridislite (0.4.2-2) ...
373s Setting up texlive-binaries (2024.20240313.70630+ds-5build2) ...
373s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
373s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
373s Setting up r-cran-r6 (2.6.1-1) ...
373s Setting up r-cran-pkgkitten (0.2.4-1) ...
373s Setting up texlive-base (2024.20250114-1) ...
373s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
374s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
374s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
374s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex
374s Setting up r-cran-magrittr (2.0.3-1) ...
374s Setting up r-cran-littler (0.3.20-2) ...
374s Setting up r-cran-rcpp (1.0.14-1) ...
374s Setting up r-cran-rlang (1.1.5-1) ...
374s Setting up littler (0.3.20-2) ...
374s Setting up r-cran-withr (3.0.2+dfsg-1) ...
375s Setting up r-cran-fansi (1.0.5-1) ...
375s Setting up r-cran-mass (7.3-64-1) ...
375s Setting up r-cran-glue (1.8.0-1) ...
375s Setting up r-cran-cli (3.6.4-1) ...
375s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
375s Setting up r-cran-pkgconfig (2.0.3-2build1) ...
375s Setting up r-cran-utf8 (1.2.4-1) ...
375s Setting up r-cran-colorspace (2.1-1+dfsg-1) ...
375s Setting up texlive-latex-base (2024.20250114-1) ...
375s Setting up r-cran-plyr (1.8.9-1) ...
375s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ...
375s Setting up r-cran-isoband (0.2.7-1) ...
375s Setting up r-cran-gtable (0.3.6+dfsg-1) ...
375s Setting up r-cran-matrix (1.7-2-1) ...
375s Setting up r-cran-mgcv (1.9-1-1) ...
375s Setting up r-cran-vctrs (0.6.5-1) ...
375s Setting up r-cran-pillar (1.10.1+dfsg-1) ...
375s Setting up r-cran-reshape (0.8.9-1) ...
375s Setting up r-cran-munsell (0.5.1-1) ...
375s Setting up r-cran-tibble (3.2.1+dfsg-3) ...
375s Setting up r-cran-gridextra (2.3-3build1) ...
375s Setting up r-cran-scales (1.3.0-1) ...
375s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ...
375s Processing triggers for libc-bin (2.41-1ubuntu1) ...
375s Processing triggers for man-db (2.13.0-1) ...
376s Processing triggers for install-info (7.1.1-1) ...
376s Processing triggers for ca-certificates-java (20240118) ...
376s Adding debian:ACCVRAIZ1.pem
376s Adding debian:AC_RAIZ_FNMT-RCM.pem
376s Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem
376s Adding debian:ANF_Secure_Server_Root_CA.pem
376s Adding debian:Actalis_Authentication_Root_CA.pem
376s Adding debian:AffirmTrust_Commercial.pem
376s Adding debian:AffirmTrust_Networking.pem
376s Adding debian:AffirmTrust_Premium.pem
376s Adding debian:AffirmTrust_Premium_ECC.pem
376s Adding debian:Amazon_Root_CA_1.pem
376s Adding debian:Amazon_Root_CA_2.pem
376s Adding debian:Amazon_Root_CA_3.pem
376s Adding debian:Amazon_Root_CA_4.pem
376s Adding debian:Atos_TrustedRoot_2011.pem
376s Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem
376s Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem
376s Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem
376s Adding debian:BJCA_Global_Root_CA1.pem
376s Adding debian:BJCA_Global_Root_CA2.pem
376s Adding debian:Baltimore_CyberTrust_Root.pem
376s Adding debian:Buypass_Class_2_Root_CA.pem
376s Adding debian:Buypass_Class_3_Root_CA.pem
376s Adding debian:CA_Disig_Root_R2.pem
376s Adding debian:CFCA_EV_ROOT.pem
376s Adding debian:COMODO_Certification_Authority.pem
376s Adding debian:COMODO_ECC_Certification_Authority.pem
376s Adding debian:COMODO_RSA_Certification_Authority.pem
376s Adding debian:Certainly_Root_E1.pem
376s Adding debian:Certainly_Root_R1.pem
376s Adding debian:Certigna.pem
376s Adding debian:Certigna_Root_CA.pem
376s Adding debian:Certum_EC-384_CA.pem
376s Adding debian:Certum_Trusted_Network_CA.pem
376s Adding debian:Certum_Trusted_Network_CA_2.pem
376s Adding debian:Certum_Trusted_Root_CA.pem
376s Adding debian:CommScope_Public_Trust_ECC_Root-01.pem
376s Adding debian:CommScope_Public_Trust_ECC_Root-02.pem
376s Adding debian:CommScope_Public_Trust_RSA_Root-01.pem
376s Adding debian:CommScope_Public_Trust_RSA_Root-02.pem
376s Adding debian:Comodo_AAA_Services_root.pem
376s Adding debian:D-TRUST_BR_Root_CA_1_2020.pem
376s Adding debian:D-TRUST_EV_Root_CA_1_2020.pem
376s Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem
376s Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem
376s Adding debian:DigiCert_Assured_ID_Root_CA.pem
376s Adding debian:DigiCert_Assured_ID_Root_G2.pem
376s Adding debian:DigiCert_Assured_ID_Root_G3.pem
376s Adding debian:DigiCert_Global_Root_CA.pem
376s Adding debian:DigiCert_Global_Root_G2.pem
376s Adding debian:DigiCert_Global_Root_G3.pem
376s Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem
376s Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem
376s Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem
376s Adding debian:DigiCert_Trusted_Root_G4.pem
376s Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem
376s Adding debian:Entrust_Root_Certification_Authority.pem
376s Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem
376s Adding debian:Entrust_Root_Certification_Authority_-_G2.pem
376s Adding debian:Entrust_Root_Certification_Authority_-_G4.pem
376s Adding debian:FIRMAPROFESIONAL_CA_ROOT-A_WEB.pem
376s Adding debian:GDCA_TrustAUTH_R5_ROOT.pem
376s Adding debian:GLOBALTRUST_2020.pem
376s Adding debian:GTS_Root_R1.pem
376s Adding debian:GTS_Root_R2.pem
376s Adding debian:GTS_Root_R3.pem
376s Adding debian:GTS_Root_R4.pem
376s Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem
376s Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem
376s Adding debian:GlobalSign_Root_CA.pem
376s Adding debian:GlobalSign_Root_CA_-_R3.pem
376s Adding debian:GlobalSign_Root_CA_-_R6.pem
376s Adding debian:GlobalSign_Root_E46.pem
376s Adding debian:GlobalSign_Root_R46.pem
376s Adding debian:Go_Daddy_Class_2_CA.pem
376s Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem
376s Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem
376s Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem
376s Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem
376s Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem
376s Adding debian:HiPKI_Root_CA_-_G1.pem
376s Adding debian:Hongkong_Post_Root_CA_3.pem
376s Adding debian:ISRG_Root_X1.pem
376s Adding debian:ISRG_Root_X2.pem
376s Adding debian:IdenTrust_Commercial_Root_CA_1.pem
376s Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem
376s Adding debian:Izenpe.com.pem
376s Adding debian:Microsec_e-Szigno_Root_CA_2009.pem
376s Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem
376s Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem
376s Adding debian:NAVER_Global_Root_Certification_Authority.pem
376s Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem
376s Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem
376s Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem
376s Adding debian:QuoVadis_Root_CA_1_G3.pem
376s Adding debian:QuoVadis_Root_CA_2.pem
376s Adding debian:QuoVadis_Root_CA_2_G3.pem
376s Adding debian:QuoVadis_Root_CA_3.pem
376s Adding debian:QuoVadis_Root_CA_3_G3.pem
376s Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem
376s Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem
376s Adding debian:SSL.com_Root_Certification_Authority_ECC.pem
376s Adding debian:SSL.com_Root_Certification_Authority_RSA.pem
376s Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem
376s Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem
376s Adding debian:SZAFIR_ROOT_CA2.pem
376s Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem
376s Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem
376s Adding debian:SecureSign_RootCA11.pem
376s Adding debian:SecureSign_Root_CA12.pem
376s Adding debian:SecureSign_Root_CA14.pem
376s Adding debian:SecureSign_Root_CA15.pem
376s Adding debian:SecureTrust_CA.pem
376s Adding debian:Secure_Global_CA.pem
376s Adding debian:Security_Communication_ECC_RootCA1.pem
376s Adding debian:Security_Communication_RootCA2.pem
376s Adding debian:Security_Communication_RootCA3.pem
376s Adding debian:Starfield_Class_2_CA.pem
376s Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem
376s Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem
376s Adding debian:SwissSign_Gold_CA_-_G2.pem
376s Adding debian:SwissSign_Silver_CA_-_G2.pem
376s Adding debian:T-TeleSec_GlobalRoot_Class_2.pem
376s Adding debian:T-TeleSec_GlobalRoot_Class_3.pem
376s Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem
376s Adding debian:TWCA_CYBER_Root_CA.pem
376s Adding debian:TWCA_Global_Root_CA.pem
377s Adding debian:TWCA_Root_Certification_Authority.pem
377s Adding debian:Telekom_Security_TLS_ECC_Root_2020.pem
377s Adding debian:Telekom_Security_TLS_RSA_Root_2023.pem
377s Adding debian:TeliaSonera_Root_CA_v1.pem
377s Adding debian:Telia_Root_CA_v2.pem
377s Adding debian:TrustAsia_Global_Root_CA_G3.pem
377s Adding debian:TrustAsia_Global_Root_CA_G4.pem
377s Adding debian:Trustwave_Global_Certification_Authority.pem
377s Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem
377s Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem
377s Adding debian:TunTrust_Root_CA.pem
377s Adding debian:UCA_Extended_Validation_Root.pem
377s Adding debian:UCA_Global_G2_Root.pem
377s Adding debian:USERTrust_ECC_Certification_Authority.pem
377s Adding debian:USERTrust_RSA_Certification_Authority.pem
377s Adding debian:XRamp_Global_CA_Root.pem
377s Adding debian:certSIGN_ROOT_CA.pem
377s Adding debian:certSIGN_Root_CA_G2.pem
377s Adding debian:e-Szigno_Root_CA_2017.pem
377s Adding debian:ePKI_Root_Certification_Authority.pem
377s Adding debian:emSign_ECC_Root_CA_-_C3.pem
377s Adding debian:emSign_ECC_Root_CA_-_G3.pem
377s Adding debian:emSign_Root_CA_-_C1.pem
377s Adding debian:emSign_Root_CA_-_G1.pem
377s Adding debian:vTrus_ECC_Root_CA.pem
377s Adding debian:vTrus_Root_CA.pem
377s done.
377s Setting up default-jre-headless (2:1.21-76) ...
377s Setting up nanook (1.33+dfsg-6) ...
377s Processing triggers for tex-common (6.19) ...
377s Running updmap-sys. This may take some time... done.
377s Running mktexlsr /var/lib/texmf ... done.
377s Building format(s) --all.
406s 	This may take some time... done.
406s autopkgtest [10:50:48]: test run-unit-test: [-----------------------
413s 
413s NanoOK v1.33
413s 
413s Comments/bugs to: richard.leggett@earlham.ac.uk
413s Follow NanoOK on twitter: @NanoOK_Software
413s 
413s Scripts dir: /usr/share/nanook/bin
413s 
413s Checking dependencies
413s *** ERROR: Couldn't find Rscript - is R installed? ***
413s pdfTeX 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian)
414s h5dump: Version 1.14.5
414s 
414s Making directory /tmp/autopkgtest.1t4b24/autopkgtest_tmp/data/nanook_ecoli_500/N79596_dh10b_8kb_11022015/fasta
414s Checking FAST5 directory structure...
414s   Using pass/fail dirs: yes
414s       Using batch dirs: no
414s         Using barcodes: no
414s 
417s 
Processing [                                                  ] 0/1
Processing [==================================================] 1/1
Processing [==================================================] 1/1
Processing [==================================================] 1/1
Processing [==================================================] 1/1
Processing [==================================================] 1/1
Processing [==================================================] 1/1
417s 
417s DONE
417s 
417s NanoOK v1.33
417s 
417s Comments/bugs to: richard.leggett@earlham.ac.uk
417s Follow NanoOK on twitter: @NanoOK_Software
417s 
417s Scripts dir: /usr/share/nanook/bin
417s 
417s Checking dependencies
417s *** ERROR: Couldn't find Rscript - is R installed? ***
417s pdfTeX 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian)
417s h5dump: Version 1.14.5
417s 
417s Making directory /tmp/autopkgtest.1t4b24/autopkgtest_tmp/data/nanook_ecoli_500/N79596_dh10b_8kb_11022015/last
417s Making directory /tmp/autopkgtest.1t4b24/autopkgtest_tmp/data/nanook_ecoli_500/N79596_dh10b_8kb_11022015/logs/last
417s Checking FASTA/Q directory structure...
417s   Using pass/fail dirs: yes
417s       Using batch dirs: no
417s         Using barcodes: no
417s 
420s 
Processing [================                                  ] 1/3
Processing [==================================================] 3/3
Processing [==================================================] 3/3
Processing [==================================================] 3/3
Processing [==================================================] 3/3
Processing [==================================================] 3/3
Processing [==================================================] 3/3
420s 
420s DONE
420s 
420s NanoOK v1.33
420s 
420s Comments/bugs to: richard.leggett@earlham.ac.uk
420s Follow NanoOK on twitter: @NanoOK_Software
420s 
420s Scripts dir: /usr/share/nanook/bin
420s 
420s Checking dependencies
420s *** ERROR: Couldn't find Rscript - is R installed? ***
420s pdfTeX 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian)
420s h5dump: Version 1.14.5
420s 
420s Checking FASTA/Q directory structure...
420s   Using pass/fail dirs: yes
420s       Using batch dirs: no
420s         Using barcodes: no
420s 
420s Using .sizes file ecoli_dh10b_cs.fasta.sizes
420s Note: if you have changed the reference file, you need to delete the .sizes file and re-run.
420s 
420s Reading reference sizes and making directories
420s 	Escherichia_coli	4686137
420s 	Control_sequence	3560
420s 
420s Calculating reference GC
420s 	Escherichia_coli
420s 	Control_sequence
420s 
420s Parsing Template
420s 
[                                                  ] 0/1
[==================================================] 1/1
421s 
421s Error: unable to find any Template alignments to process.
421s Common reasons for this:
421s 1. Failure to index the reference with the alignment tool, resulting in alignment files of 0 bytes
421s 2. Wrong reference specified to the align stage, resulting in no alignments
421s 3. When indexing with LAST, the output prefix needs to be the same as the reference FASTA file, minus the .fasta extension
421s    e.g. lastdb -Q 0 referencename referencename.fasta
421s 
421s autopkgtest [10:51:03]: test run-unit-test: -----------------------]
421s autopkgtest [10:51:03]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
421s run-unit-test        FAIL non-zero exit status 1
421s autopkgtest [10:51:03]: @@@@@@@@@@@@@@@@@@@@ summary
421s run-unit-test        FAIL non-zero exit status 1
443s nova [W] Skipping flock for amd64
443s Creating nova instance adt-plucky-amd64-nanook-20250313-104345-juju-7f2275-prod-proposed-migration-environment-20-40b2df4c-b0bc-48cc-81b8-069849814bc5 from image adt/ubuntu-plucky-amd64-server-20250306.img (UUID 60d877d7-b74c-4f24-920d-f4570db0a338)...
443s nova [W] Timed out waiting for a82222f3-e887-49a8-ae05-7f25ecce23d1 to get deleted.