0s autopkgtest [01:42:14]: starting date and time: 2025-03-16 01:42:14+0000 0s autopkgtest [01:42:14]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [01:42:14]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.s3ukaw0w/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:libpng1.6 --apt-upgrade lammps --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=libpng1.6/1.6.47-1.1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-16.secgroup --name adt-plucky-amd64-lammps-20250316-011642-juju-7f2275-prod-proposed-migration-environment-20-ae23fbb1-ffc9-4a9c-9a07-95f6fc486cb3 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 46s autopkgtest [01:43:00]: testbed dpkg architecture: amd64 46s autopkgtest [01:43:00]: testbed apt version: 2.9.31ubuntu1 47s autopkgtest [01:43:01]: @@@@@@@@@@@@@@@@@@@@ test bed setup 47s autopkgtest [01:43:01]: testbed release detected to be: None 48s autopkgtest [01:43:02]: updating testbed package index (apt update) 48s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 48s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 48s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 48s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 49s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [41.4 kB] 49s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [365 kB] 49s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [17.7 kB] 49s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [84.0 kB] 49s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [66.6 kB] 49s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 c-n-f Metadata [1844 B] 49s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 c-n-f Metadata [116 B] 49s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [338 kB] 49s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [168 kB] 49s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 c-n-f Metadata [14.9 kB] 49s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [9324 B] 49s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [18.0 kB] 49s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 c-n-f Metadata [628 B] 49s Fetched 1252 kB in 1s (1365 kB/s) 50s Reading package lists... 51s Reading package lists... 51s Building dependency tree... 51s Reading state information... 51s Calculating upgrade... 51s Calculating upgrade... 51s The following package was automatically installed and is no longer required: 51s libnl-genl-3-200 51s Use 'sudo apt autoremove' to remove it. 52s The following NEW packages will be installed: 52s bpftool libdebuginfod-common libdebuginfod1t64 linux-headers-6.14.0-10 52s linux-headers-6.14.0-10-generic linux-image-6.14.0-10-generic 52s linux-modules-6.14.0-10-generic linux-modules-extra-6.14.0-10-generic 52s linux-perf linux-tools-6.14.0-10 linux-tools-6.14.0-10-generic pnp.ids 52s The following packages will be upgraded: 52s apparmor apt apt-utils binutils binutils-common binutils-x86-64-linux-gnu 52s cloud-init cloud-init-base curl dosfstools exfatprogs fwupd gcc-15-base 52s gir1.2-girepository-2.0 gir1.2-glib-2.0 htop hwdata initramfs-tools 52s initramfs-tools-bin initramfs-tools-core libapparmor1 libapt-pkg7.0 52s libassuan9 libatomic1 libaudit-common libaudit1 libbinutils libbrotli1 52s libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libctf-nobfd0 libctf0 52s libcurl3t64-gnutls libcurl4t64 libestr0 libftdi1-2 libfwupd3 libgcc-s1 52s libgirepository-1.0-1 libglib2.0-0t64 libglib2.0-data libgpgme11t64 52s libgprofng0 libjemalloc2 liblz4-1 liblzma5 libmm-glib0 libncurses6 52s libncursesw6 libnewt0.52 libnl-3-200 libnl-genl-3-200 libnl-route-3-200 52s libnss-systemd libpam-systemd libparted2t64 libpci3 libpython3-stdlib 52s libpython3.13 libpython3.13-minimal libpython3.13-stdlib libseccomp2 52s libselinux1 libsemanage-common libsemanage2 libsframe1 libsqlite3-0 52s libstdc++6 libsystemd-shared libsystemd0 libtinfo6 libudev1 libxml2 52s linux-firmware linux-generic linux-headers-generic linux-headers-virtual 52s linux-image-generic linux-image-virtual linux-libc-dev linux-tools-common 52s linux-virtual locales media-types ncurses-base ncurses-bin ncurses-term 52s parted pci.ids pciutils pinentry-curses python-apt-common python3 52s python3-apt python3-bcrypt python3-cffi-backend python3-dbus python3-gi 52s python3-jinja2 python3-lazr.uri python3-markupsafe python3-minimal 52s python3-newt python3-rpds-py python3-systemd python3-yaml python3.13 52s python3.13-gdbm python3.13-minimal rsync rsyslog strace systemd 52s systemd-cryptsetup systemd-resolved systemd-sysv systemd-timesyncd 52s ubuntu-kernel-accessories ubuntu-minimal ubuntu-standard udev whiptail 52s xz-utils 52s 126 upgraded, 12 newly installed, 0 to remove and 0 not upgraded. 52s Need to get 829 MB of archives. 52s After this operation, 325 MB of additional disk space will be used. 52s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-bin amd64 6.5+20250216-2 [194 kB] 52s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-dev-bin amd64 2.41-1ubuntu1 [24.7 kB] 52s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6-dev amd64 2.41-1ubuntu1 [2182 kB] 52s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 locales all 2.41-1ubuntu1 [4246 kB] 52s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6 amd64 2.41-1ubuntu1 [3327 kB] 53s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-bin amd64 2.41-1ubuntu1 [701 kB] 53s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-libc-dev amd64 6.14.0-10.10 [1723 kB] 53s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libatomic1 amd64 15-20250222-0ubuntu1 [10.4 kB] 53s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-15-base amd64 15-20250222-0ubuntu1 [53.4 kB] 53s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-s1 amd64 15-20250222-0ubuntu1 [77.8 kB] 53s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++6 amd64 15-20250222-0ubuntu1 [798 kB] 53s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-base all 6.5+20250216-2 [25.9 kB] 53s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-term all 6.5+20250216-2 [276 kB] 53s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 liblz4-1 amd64 1.10.0-4 [66.4 kB] 53s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma5 amd64 5.6.4-1 [157 kB] 53s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd0 amd64 257.3-1ubuntu3 [595 kB] 53s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libnss-systemd amd64 257.3-1ubuntu3 [199 kB] 53s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-sysv amd64 257.3-1ubuntu3 [11.9 kB] 53s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-resolved amd64 257.3-1ubuntu3 [345 kB] 53s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-systemd amd64 257.3-1ubuntu3 [302 kB] 53s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd-shared amd64 257.3-1ubuntu3 [2371 kB] 53s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd amd64 257.3-1ubuntu3 [3052 kB] 53s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-timesyncd amd64 257.3-1ubuntu3 [42.1 kB] 53s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-cryptsetup amd64 257.3-1ubuntu3 [124 kB] 53s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 udev amd64 257.3-1ubuntu3 [1404 kB] 53s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libudev1 amd64 257.3-1ubuntu3 [215 kB] 53s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit-common all 1:4.0.2-2ubuntu2 [6628 B] 53s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libcap-ng0 amd64 0.8.5-4build1 [15.6 kB] 53s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit1 amd64 1:4.0.2-2ubuntu2 [54.0 kB] 53s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libseccomp2 amd64 2.5.5-1ubuntu6 [53.5 kB] 53s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libselinux1 amd64 3.7-3ubuntu3 [87.3 kB] 53s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libapparmor1 amd64 4.1.0~beta5-0ubuntu8 [55.0 kB] 53s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libapt-pkg7.0 amd64 2.9.33 [1138 kB] 53s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 apt amd64 2.9.33 [1439 kB] 53s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 apt-utils amd64 2.9.33 [222 kB] 53s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-minimal amd64 3.13.2-2 [27.7 kB] 53s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 python3 amd64 3.13.2-2 [24.0 kB] 53s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13 amd64 3.13.2-2 [2341 kB] 53s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 media-types all 13.0.0 [29.9 kB] 53s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses6 amd64 6.5+20250216-2 [126 kB] 53s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libncursesw6 amd64 6.5+20250216-2 [165 kB] 53s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libtinfo6 amd64 6.5+20250216-2 [119 kB] 53s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libsqlite3-0 amd64 3.46.1-2 [715 kB] 53s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.2-2 [735 kB] 53s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.2-2 [2365 kB] 54s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.2-2 [883 kB] 54s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.2-2 [2066 kB] 54s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.4 kB] 54s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 rsync amd64 3.4.1+ds1-3 [482 kB] 54s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod-common all 0.192-4 [15.4 kB] 54s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage-common all 3.7-2.1build1 [7268 B] 54s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage2 amd64 3.7-2.1build1 [106 kB] 54s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libassuan9 amd64 3.0.2-2 [43.1 kB] 54s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-girepository-2.0 amd64 1.83.4-1 [25.3 kB] 54s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-glib-2.0 amd64 2.84.0-1 [184 kB] 54s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-0t64 amd64 2.84.0-1 [1669 kB] 54s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libgirepository-1.0-1 amd64 1.83.4-1 [89.5 kB] 54s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libestr0 amd64 0.1.11-2 [8340 B] 54s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-data all 2.84.0-1 [53.0 kB] 54s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-newt amd64 0.52.24-4ubuntu2 [21.1 kB] 54s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libnewt0.52 amd64 0.52.24-4ubuntu2 [55.7 kB] 54s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2ubuntu5 [772 kB] 54s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 python-apt-common all 2.9.9build1 [21.3 kB] 54s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-apt amd64 2.9.9build1 [172 kB] 54s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-cffi-backend amd64 1.17.1-2build2 [96.6 kB] 54s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dbus amd64 1.3.2-5build5 [102 kB] 54s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-4build1 [252 kB] 54s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-yaml amd64 6.0.2-1build2 [144 kB] 54s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 rsyslog amd64 8.2412.0-2ubuntu2 [555 kB] 54s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 whiptail amd64 0.52.24-4ubuntu2 [19.1 kB] 54s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-minimal amd64 1.549 [11.5 kB] 54s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 apparmor amd64 4.1.0~beta5-0ubuntu8 [701 kB] 54s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 dosfstools amd64 4.2-1.2 [95.0 kB] 54s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-genl-3-200 amd64 3.7.0-1 [12.2 kB] 54s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-route-3-200 amd64 3.7.0-1 [191 kB] 54s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-3-200 amd64 3.7.0-1 [64.9 kB] 54s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 parted amd64 3.6-5 [53.9 kB] 54s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libparted2t64 amd64 3.6-5 [158 kB] 54s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 pci.ids all 0.0~2025.03.09-1 [285 kB] 54s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 pciutils amd64 1:3.13.0-2 [110 kB] 54s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 libpci3 amd64 1:3.13.0-2 [39.8 kB] 54s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 strace amd64 6.13+ds-1ubuntu1 [622 kB] 54s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 xz-utils amd64 5.6.4-1 [278 kB] 54s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-standard amd64 1.549 [11.5 kB] 54s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libgprofng0 amd64 2.44-3ubuntu1 [886 kB] 54s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf0 amd64 2.44-3ubuntu1 [96.5 kB] 54s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf-nobfd0 amd64 2.44-3ubuntu1 [98.9 kB] 54s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-x86-64-linux-gnu amd64 2.44-3ubuntu1 [1108 kB] 54s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libbinutils amd64 2.44-3ubuntu1 [585 kB] 54s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils amd64 2.44-3ubuntu1 [208 kB] 54s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-common amd64 2.44-3ubuntu1 [215 kB] 54s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libsframe1 amd64 2.44-3ubuntu1 [14.8 kB] 54s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 hwdata all 0.393-3 [1562 B] 54s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 pnp.ids all 0.393-3 [29.5 kB] 54s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-common all 6.14.0-10.10 [295 kB] 54s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 bpftool amd64 7.6.0+6.14.0-10.10 [1147 kB] 54s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-markupsafe amd64 2.1.5-1build4 [13.4 kB] 54s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 54s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init-base all 25.1-0ubuntu3 [616 kB] 54s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libbrotli1 amd64 1.1.0-2build4 [365 kB] 54s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 curl amd64 8.12.1-3ubuntu1 [258 kB] 55s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4t64 amd64 8.12.1-3ubuntu1 [437 kB] 55s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 exfatprogs amd64 1.2.8-1 [76.3 kB] 55s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl3t64-gnutls amd64 8.12.1-3ubuntu1 [432 kB] 55s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 fwupd amd64 2.0.6-4 [5408 kB] 55s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libfwupd3 amd64 2.0.6-4 [136 kB] 55s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libmm-glib0 amd64 1.23.4-0ubuntu3 [251 kB] 55s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 htop amd64 3.4.0-2 [195 kB] 55s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-firmware amd64 20250310.git9e1370d3-0ubuntu1 [571 MB] 86s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools all 0.146ubuntu1 [7920 B] 86s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-core all 0.146ubuntu1 [51.9 kB] 86s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-bin amd64 0.146ubuntu1 [26.2 kB] 86s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod1t64 amd64 0.192-4 [21.0 kB] 86s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 libftdi1-2 amd64 1.5-8build1 [30.2 kB] 86s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libgpgme11t64 amd64 1.24.2-1ubuntu2 [155 kB] 86s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libjemalloc2 amd64 5.3.0-3 [277 kB] 86s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-6.14.0-10-generic amd64 6.14.0-10.10 [41.2 MB] 87s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-6.14.0-10-generic amd64 6.14.0-10.10 [15.3 MB] 88s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-extra-6.14.0-10-generic amd64 6.14.0-10.10 [120 MB] 92s Get:120 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-generic amd64 6.14.0-10.10 [1730 B] 92s Get:121 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-generic amd64 6.14.0-10.10 [11.1 kB] 92s Get:122 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-virtual amd64 6.14.0-10.10 [1722 B] 92s Get:123 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-virtual amd64 6.14.0-10.10 [11.1 kB] 92s Get:124 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-virtual amd64 6.14.0-10.10 [1642 B] 92s Get:125 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10 all 6.14.0-10.10 [14.2 MB] 93s Get:126 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10-generic amd64 6.14.0-10.10 [3915 kB] 93s Get:127 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-generic amd64 6.14.0-10.10 [11.0 kB] 93s Get:128 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-perf amd64 6.14.0-10.10 [4122 kB] 93s Get:129 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10 amd64 6.14.0-10.10 [1394 kB] 93s Get:130 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10-generic amd64 6.14.0-10.10 [830 B] 93s Get:131 http://ftpmaster.internal/ubuntu plucky/main amd64 pinentry-curses amd64 1.3.1-2ubuntu3 [42.3 kB] 93s Get:132 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lazr.uri all 1.0.6-6 [13.7 kB] 93s Get:133 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-rpds-py amd64 0.21.0-2ubuntu2 [278 kB] 93s Get:134 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-systemd amd64 235-1build6 [43.9 kB] 93s Get:135 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-gdbm amd64 3.13.2-2 [31.9 kB] 93s Get:136 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-kernel-accessories amd64 1.549 [11.2 kB] 93s Get:137 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init all 25.1-0ubuntu3 [2100 B] 93s Get:138 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-bcrypt amd64 4.2.0-2.1build1 [221 kB] 94s Preconfiguring packages ... 94s Fetched 829 MB in 42s (19.9 MB/s) 94s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 100s Preparing to unpack .../0-libsqlite3-0_3.46.1-2_amd64.deb ... 100s Unpacking libsqlite3-0:amd64 (3.46.1-2) over (3.46.1-1) ... 100s Preparing to unpack .../1-python3.13_3.13.2-2_amd64.deb ... 100s Unpacking python3.13 (3.13.2-2) over (3.13.2-1) ... 100s Preparing to unpack .../2-python3.13-minimal_3.13.2-2_amd64.deb ... 100s Unpacking python3.13-minimal (3.13.2-2) over (3.13.2-1) ... 100s Preparing to unpack .../3-libpython3.13-minimal_3.13.2-2_amd64.deb ... 100s Unpacking libpython3.13-minimal:amd64 (3.13.2-2) over (3.13.2-1) ... 101s Preparing to unpack .../4-libpython3.13-stdlib_3.13.2-2_amd64.deb ... 101s Unpacking libpython3.13-stdlib:amd64 (3.13.2-2) over (3.13.2-1) ... 101s Preparing to unpack .../5-libpython3-stdlib_3.13.2-2_amd64.deb ... 101s Unpacking libpython3-stdlib:amd64 (3.13.2-2) over (3.13.2-1) ... 101s Preparing to unpack .../6-rsync_3.4.1+ds1-3_amd64.deb ... 101s Unpacking rsync (3.4.1+ds1-3) over (3.4.1-0syncable1) ... 101s Selecting previously unselected package libdebuginfod-common. 101s Preparing to unpack .../7-libdebuginfod-common_0.192-4_all.deb ... 101s Unpacking libdebuginfod-common (0.192-4) ... 101s Preparing to unpack .../8-libsemanage-common_3.7-2.1build1_all.deb ... 101s Unpacking libsemanage-common (3.7-2.1build1) over (3.7-2.1) ... 101s Setting up libsemanage-common (3.7-2.1build1) ... 101s (Reading database ... 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.../23-parted_3.6-5_amd64.deb ... 104s Unpacking parted (3.6-5) over (3.6-4build1) ... 104s Preparing to unpack .../24-libparted2t64_3.6-5_amd64.deb ... 104s Adding 'diversion of /lib/x86_64-linux-gnu/libparted.so.2 to /lib/x86_64-linux-gnu/libparted.so.2.usr-is-merged by libparted2t64' 104s Adding 'diversion of /lib/x86_64-linux-gnu/libparted.so.2.0.5 to /lib/x86_64-linux-gnu/libparted.so.2.0.5.usr-is-merged by libparted2t64' 104s Unpacking libparted2t64:amd64 (3.6-5) over (3.6-4build1) ... 104s Preparing to unpack .../25-pci.ids_0.0~2025.03.09-1_all.deb ... 104s Unpacking pci.ids (0.0~2025.03.09-1) over (0.0~2025.02.12-1) ... 104s Preparing to unpack .../26-pciutils_1%3a3.13.0-2_amd64.deb ... 104s Unpacking pciutils (1:3.13.0-2) over (1:3.13.0-1) ... 104s Preparing to unpack .../27-libpci3_1%3a3.13.0-2_amd64.deb ... 104s Unpacking libpci3:amd64 (1:3.13.0-2) over (1:3.13.0-1) ... 104s Preparing to unpack .../28-strace_6.13+ds-1ubuntu1_amd64.deb ... 104s Unpacking strace 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(2.44-3ubuntu1) over (2.44-2ubuntu1) ... 104s Preparing to unpack .../36-binutils_2.44-3ubuntu1_amd64.deb ... 104s Unpacking binutils (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 104s Preparing to unpack .../37-binutils-common_2.44-3ubuntu1_amd64.deb ... 104s Unpacking binutils-common:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 104s Preparing to unpack .../38-libsframe1_2.44-3ubuntu1_amd64.deb ... 104s Unpacking libsframe1:amd64 (2.44-3ubuntu1) over (2.44-2ubuntu1) ... 104s Preparing to unpack .../39-hwdata_0.393-3_all.deb ... 104s Unpacking hwdata (0.393-3) over (0.392-1) ... 104s Selecting previously unselected package pnp.ids. 104s Preparing to unpack .../40-pnp.ids_0.393-3_all.deb ... 104s Unpacking pnp.ids (0.393-3) ... 104s Preparing to unpack .../41-linux-tools-common_6.14.0-10.10_all.deb ... 104s Unpacking linux-tools-common (6.14.0-10.10) over (6.12.0-16.16) ... 104s Selecting previously unselected package bpftool. 104s Preparing to unpack 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.../56-initramfs-tools_0.146ubuntu1_all.deb ... 109s Unpacking initramfs-tools (0.146ubuntu1) over (0.145ubuntu3) ... 109s Preparing to unpack .../57-initramfs-tools-core_0.146ubuntu1_all.deb ... 109s Unpacking initramfs-tools-core (0.146ubuntu1) over (0.145ubuntu3) ... 109s Preparing to unpack .../58-initramfs-tools-bin_0.146ubuntu1_amd64.deb ... 109s Unpacking initramfs-tools-bin (0.146ubuntu1) over (0.145ubuntu3) ... 109s Selecting previously unselected package libdebuginfod1t64:amd64. 109s Preparing to unpack .../59-libdebuginfod1t64_0.192-4_amd64.deb ... 109s Unpacking libdebuginfod1t64:amd64 (0.192-4) ... 109s Preparing to unpack .../60-libftdi1-2_1.5-8build1_amd64.deb ... 109s Unpacking libftdi1-2:amd64 (1.5-8build1) over (1.5-8) ... 109s Preparing to unpack .../61-libgpgme11t64_1.24.2-1ubuntu2_amd64.deb ... 109s Unpacking libgpgme11t64:amd64 (1.24.2-1ubuntu2) over (1.24.2-1ubuntu1) ... 109s Preparing to unpack .../62-libjemalloc2_5.3.0-3_amd64.deb ... 109s Unpacking libjemalloc2:amd64 (5.3.0-3) over (5.3.0-2build1) ... 109s Selecting previously unselected package linux-modules-6.14.0-10-generic. 109s Preparing to unpack .../63-linux-modules-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 109s Unpacking linux-modules-6.14.0-10-generic (6.14.0-10.10) ... 109s Selecting previously unselected package linux-image-6.14.0-10-generic. 109s Preparing to unpack .../64-linux-image-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 110s Unpacking linux-image-6.14.0-10-generic (6.14.0-10.10) ... 110s Selecting previously unselected package linux-modules-extra-6.14.0-10-generic. 110s Preparing to unpack .../65-linux-modules-extra-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 110s Unpacking linux-modules-extra-6.14.0-10-generic (6.14.0-10.10) ... 111s Preparing to unpack .../66-linux-generic_6.14.0-10.10_amd64.deb ... 111s Unpacking linux-generic (6.14.0-10.10) over (6.12.0-16.16+2) ... 111s Preparing to unpack .../67-linux-image-generic_6.14.0-10.10_amd64.deb ... 111s 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(1.0.6-6) over (1.0.6-5) ... 115s Preparing to unpack .../79-python3-rpds-py_0.21.0-2ubuntu2_amd64.deb ... 115s Unpacking python3-rpds-py (0.21.0-2ubuntu2) over (0.21.0-2ubuntu1) ... 115s Preparing to unpack .../80-python3-systemd_235-1build6_amd64.deb ... 115s Unpacking python3-systemd (235-1build6) over (235-1build5) ... 115s Preparing to unpack .../81-python3.13-gdbm_3.13.2-2_amd64.deb ... 115s Unpacking python3.13-gdbm (3.13.2-2) over (3.13.2-1) ... 115s Preparing to unpack .../82-ubuntu-kernel-accessories_1.549_amd64.deb ... 115s Unpacking ubuntu-kernel-accessories (1.549) over (1.548) ... 115s Preparing to unpack .../83-cloud-init_25.1-0ubuntu3_all.deb ... 115s Unpacking cloud-init (25.1-0ubuntu3) over (25.1-0ubuntu2) ... 115s Preparing to unpack .../84-python3-bcrypt_4.2.0-2.1build1_amd64.deb ... 115s Unpacking python3-bcrypt (4.2.0-2.1build1) over (4.2.0-2.1) ... 115s Setting up linux-headers-6.14.0-10 (6.14.0-10.10) ... 115s Setting up media-types (13.0.0) ... 115s Installing new version of config file /etc/mime.types ... 115s Setting up linux-headers-6.14.0-10-generic (6.14.0-10.10) ... 115s Setting up ubuntu-kernel-accessories (1.549) ... 115s Setting up libapparmor1:amd64 (4.1.0~beta5-0ubuntu8) ... 115s Setting up pci.ids (0.0~2025.03.09-1) ... 115s Setting up libnewt0.52:amd64 (0.52.24-4ubuntu2) ... 115s Setting up apt-utils (2.9.33) ... 115s Setting up libdebuginfod-common (0.192-4) ... 116s Setting up exfatprogs (1.2.8-1) ... 116s Setting up linux-firmware (20250310.git9e1370d3-0ubuntu1) ... 116s Setting up bpftool (7.6.0+6.14.0-10.10) ... 116s Setting up libestr0:amd64 (0.1.11-2) ... 116s Setting up libbrotli1:amd64 (1.1.0-2build4) ... 116s Setting up libsqlite3-0:amd64 (3.46.1-2) ... 116s Setting up dosfstools (4.2-1.2) ... 116s Setting up rsyslog (8.2412.0-2ubuntu2) ... 116s info: The user `syslog' is already a member of `adm'. 117s Setting up binutils-common:amd64 (2.44-3ubuntu1) ... 117s Setting up libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) ... 117s Setting up linux-libc-dev:amd64 (6.14.0-10.10) ... 117s Setting up libctf-nobfd0:amd64 (2.44-3ubuntu1) ... 117s Setting up systemd (257.3-1ubuntu3) ... 117s /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring. 117s Created symlink '/run/systemd/system/tmp.mount' → '/dev/null'. 117s /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring. 118s Setting up libparted2t64:amd64 (3.6-5) ... 118s Removing 'diversion of /lib/x86_64-linux-gnu/libparted.so.2 to /lib/x86_64-linux-gnu/libparted.so.2.usr-is-merged by libparted2t64' 118s Removing 'diversion of /lib/x86_64-linux-gnu/libparted.so.2.0.5 to /lib/x86_64-linux-gnu/libparted.so.2.0.5.usr-is-merged by libparted2t64' 118s Setting up linux-headers-generic (6.14.0-10.10) ... 118s Setting up libjemalloc2:amd64 (5.3.0-3) ... 118s Setting up locales (2.41-1ubuntu1) ... 118s Installing new version of config file /etc/locale.alias ... 119s Generating locales (this might take a while)... 120s en_US.UTF-8... done 120s Generation complete. 120s Setting up libsframe1:amd64 (2.44-3ubuntu1) ... 120s Setting up libpython3.13-minimal:amd64 (3.13.2-2) ... 120s Setting up apparmor (4.1.0~beta5-0ubuntu8) ... 120s Installing new version of config file /etc/apparmor.d/fusermount3 ... 120s Installing new version of config file /etc/apparmor.d/lsusb ... 120s Installing new version of config file /etc/apparmor.d/openvpn ... 121s Reloading AppArmor profiles 122s Setting up libftdi1-2:amd64 (1.5-8build1) ... 122s Setting up libglib2.0-data (2.84.0-1) ... 122s Setting up systemd-cryptsetup (257.3-1ubuntu3) ... 122s Setting up libncurses6:amd64 (6.5+20250216-2) ... 122s Setting up strace (6.13+ds-1ubuntu1) ... 122s Setting up xz-utils (5.6.4-1) ... 122s Setting up systemd-timesyncd (257.3-1ubuntu3) ... 123s systemd-time-wait-sync.service is a disabled or a static unit not running, not starting it. 123s Setting up libatomic1:amd64 (15-20250222-0ubuntu1) ... 123s Setting up udev (257.3-1ubuntu3) ... 124s Setting up linux-modules-6.14.0-10-generic (6.14.0-10.10) ... 126s Setting up libncursesw6:amd64 (6.5+20250216-2) ... 126s Setting up libpci3:amd64 (1:3.13.0-2) ... 126s Setting up whiptail (0.52.24-4ubuntu2) ... 126s Setting up python-apt-common (2.9.9build1) ... 126s Setting up pnp.ids (0.393-3) ... 126s Setting up libnl-3-200:amd64 (3.7.0-1) ... 126s Setting up python3.13-minimal (3.13.2-2) ... 126s Setting up libgpgme11t64:amd64 (1.24.2-1ubuntu2) ... 126s Setting up libbinutils:amd64 (2.44-3ubuntu1) ... 126s Setting up libc-dev-bin (2.41-1ubuntu1) ... 126s Setting up libpython3.13-stdlib:amd64 (3.13.2-2) ... 126s Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2ubuntu5) ... 126s Setting up rsync (3.4.1+ds1-3) ... 127s rsync.service is a disabled or a static unit not running, not starting it. 127s Setting up python3.13-gdbm (3.13.2-2) ... 127s Setting up libpython3-stdlib:amd64 (3.13.2-2) ... 127s Setting up systemd-resolved (257.3-1ubuntu3) ... 128s Setting up initramfs-tools-bin (0.146ubuntu1) ... 128s Setting up ncurses-term (6.5+20250216-2) ... 128s Setting up libctf0:amd64 (2.44-3ubuntu1) ... 128s Setting up libpython3.13:amd64 (3.13.2-2) ... 128s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 128s Setting up libdebuginfod1t64:amd64 (0.192-4) ... 128s Setting up systemd-sysv (257.3-1ubuntu3) ... 128s Setting up linux-headers-virtual (6.14.0-10.10) ... 128s Setting up libcurl4t64:amd64 (8.12.1-3ubuntu1) ... 128s Setting up python3.13 (3.13.2-2) ... 129s Setting up htop (3.4.0-2) ... 129s Setting up linux-image-6.14.0-10-generic (6.14.0-10.10) ... 131s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.12.0-16-generic 131s I: /boot/initrd.img.old is now a symlink to initrd.img-6.12.0-16-generic 131s I: /boot/vmlinuz is now a symlink to vmlinuz-6.14.0-10-generic 131s I: /boot/initrd.img is now a symlink to initrd.img-6.14.0-10-generic 131s Setting up parted (3.6-5) ... 131s Setting up libnss-systemd:amd64 (257.3-1ubuntu3) ... 131s Setting up python3 (3.13.2-2) ... 131s Setting up python3-newt:amd64 (0.52.24-4ubuntu2) ... 131s Setting up python3-markupsafe (2.1.5-1build4) ... 131s Setting up linux-modules-extra-6.14.0-10-generic (6.14.0-10.10) ... 133s Setting up libnl-route-3-200:amd64 (3.7.0-1) ... 133s Setting up hwdata (0.393-3) ... 133s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 133s Setting up libglib2.0-0t64:amd64 (2.84.0-1) ... 133s No schema files found: doing nothing. 133s Setting up libgprofng0:amd64 (2.44-3ubuntu1) ... 133s Setting up linux-perf (6.14.0-10.10) ... 133s Setting up gir1.2-glib-2.0:amd64 (2.84.0-1) ... 133s Setting up pciutils (1:3.13.0-2) ... 133s Setting up python3-rpds-py (0.21.0-2ubuntu2) ... 134s Setting up libmm-glib0:amd64 (1.23.4-0ubuntu3) ... 134s Setting up libnl-genl-3-200:amd64 (3.7.0-1) ... 134s Setting up libpam-systemd:amd64 (257.3-1ubuntu3) ... 134s Setting up libc6-dev:amd64 (2.41-1ubuntu1) ... 134s Setting up libgirepository-1.0-1:amd64 (1.83.4-1) ... 134s Setting up curl (8.12.1-3ubuntu1) ... 134s Setting up linux-image-virtual (6.14.0-10.10) ... 134s Setting up initramfs-tools-core (0.146ubuntu1) ... 134s Setting up linux-tools-common (6.14.0-10.10) ... 134s Setting up python3-systemd (235-1build6) ... 134s Setting up python3-cffi-backend:amd64 (1.17.1-2build2) ... 134s Setting up binutils-x86-64-linux-gnu (2.44-3ubuntu1) ... 134s Setting up linux-image-generic (6.14.0-10.10) ... 134s Setting up python3-dbus (1.3.2-5build5) ... 134s Setting up linux-tools-6.14.0-10 (6.14.0-10.10) ... 134s Setting up initramfs-tools (0.146ubuntu1) ... 134s Installing new version of config file /etc/kernel/postinst.d/initramfs-tools ... 134s Installing new version of config file /etc/kernel/postrm.d/initramfs-tools ... 134s update-initramfs: deferring update (trigger activated) 134s Setting up linux-generic (6.14.0-10.10) ... 134s Setting up ubuntu-minimal (1.549) ... 134s Setting up python3-apt (2.9.9build1) ... 134s Setting up python3-bcrypt (4.2.0-2.1build1) ... 134s Setting up python3-yaml (6.0.2-1build2) ... 134s Setting up libfwupd3:amd64 (2.0.6-4) ... 134s Setting up python3-lazr.uri (1.0.6-6) ... 135s Setting up binutils (2.44-3ubuntu1) ... 135s Setting up ubuntu-standard (1.549) ... 135s Setting up cloud-init-base (25.1-0ubuntu3) ... 136s Setting up linux-virtual (6.14.0-10.10) ... 136s Setting up gir1.2-girepository-2.0:amd64 (1.83.4-1) ... 136s Setting up python3-gi (3.50.0-4build1) ... 136s Setting up linux-tools-6.14.0-10-generic (6.14.0-10.10) ... 136s Setting up fwupd (2.0.6-4) ... 137s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 137s fwupd.service is a disabled or a static unit not running, not starting it. 137s Setting up cloud-init (25.1-0ubuntu3) ... 137s Processing triggers for man-db (2.13.0-1) ... 138s Processing triggers for dbus (1.16.2-1ubuntu1) ... 138s Processing triggers for shared-mime-info (2.4-5) ... 138s Warning: program compiled against libxml 212 using older 209 139s Processing triggers for libc-bin (2.41-1ubuntu1) ... 139s Processing triggers for linux-image-6.14.0-10-generic (6.14.0-10.10) ... 139s /etc/kernel/postinst.d/initramfs-tools: 139s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 139s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 149s /etc/kernel/postinst.d/zz-update-grub: 149s Sourcing file `/etc/default/grub' 149s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 149s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 149s Generating grub configuration file ... 149s Found linux image: /boot/vmlinuz-6.14.0-10-generic 149s Found initrd image: /boot/initrd.img-6.14.0-10-generic 149s Found linux image: /boot/vmlinuz-6.12.0-16-generic 149s Found initrd image: /boot/initrd.img-6.12.0-16-generic 149s Found linux image: /boot/vmlinuz-6.11.0-8-generic 149s Found initrd image: /boot/initrd.img-6.11.0-8-generic 149s Warning: os-prober will not be executed to detect other bootable partitions. 149s Systems on them will not be added to the GRUB boot configuration. 149s Check GRUB_DISABLE_OS_PROBER documentation entry. 149s Adding boot menu entry for UEFI Firmware Settings ... 149s done 149s Processing triggers for initramfs-tools (0.146ubuntu1) ... 149s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 149s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 160s Reading package lists... 161s Building dependency tree... 161s Reading state information... 161s Solving dependencies... 161s The following packages will be REMOVED: 161s libnl-genl-3-200* libnsl2* libpython3.12-minimal* libpython3.12-stdlib* 161s libpython3.12t64* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 161s linux-headers-6.12.0-16* linux-headers-6.12.0-16-generic* 161s linux-image-6.11.0-8-generic* linux-image-6.12.0-16-generic* 161s linux-modules-6.11.0-8-generic* linux-modules-6.12.0-16-generic* 161s linux-modules-extra-6.12.0-16-generic* linux-tools-6.11.0-8* 161s linux-tools-6.11.0-8-generic* linux-tools-6.12.0-16* 161s linux-tools-6.12.0-16-generic* 162s 0 upgraded, 0 newly installed, 18 to remove and 1 not upgraded. 162s After this operation, 545 MB disk space will be freed. 162s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 148643 files and directories currently installed.) 162s Removing libnl-genl-3-200:amd64 (3.7.0-1) ... 162s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 162s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 162s Removing libpython3.12t64:amd64 (3.12.9-1) ... 162s Removing libpython3.12-stdlib:amd64 (3.12.9-1) ... 162s Removing libnsl2:amd64 (1.3.0-3build3) ... 162s Removing libpython3.12-minimal:amd64 (3.12.9-1) ... 162s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 163s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 164s Removing linux-headers-6.12.0-16-generic (6.12.0-16.16) ... 165s Removing linux-headers-6.12.0-16 (6.12.0-16.16) ... 167s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 167s /etc/kernel/postrm.d/initramfs-tools: 167s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 167s /etc/kernel/postrm.d/zz-update-grub: 167s Sourcing file `/etc/default/grub' 167s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 167s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 167s Generating grub configuration file ... 167s Found linux image: /boot/vmlinuz-6.14.0-10-generic 167s Found initrd image: /boot/initrd.img-6.14.0-10-generic 168s Found linux image: /boot/vmlinuz-6.12.0-16-generic 168s Found initrd image: /boot/initrd.img-6.12.0-16-generic 168s Warning: os-prober will not be executed to detect other bootable partitions. 168s Systems on them will not be added to the GRUB boot configuration. 168s Check GRUB_DISABLE_OS_PROBER documentation entry. 168s Adding boot menu entry for UEFI Firmware Settings ... 168s done 168s Removing linux-image-6.12.0-16-generic (6.12.0-16.16) ... 168s W: Removing the running kernel 168s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic 168s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic 168s /etc/kernel/postrm.d/initramfs-tools: 168s update-initramfs: Deleting /boot/initrd.img-6.12.0-16-generic 168s /etc/kernel/postrm.d/zz-update-grub: 168s Sourcing file `/etc/default/grub' 168s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 168s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 168s Generating grub configuration file ... 168s Found linux image: /boot/vmlinuz-6.14.0-10-generic 168s Found initrd image: /boot/initrd.img-6.14.0-10-generic 169s Warning: os-prober will not be executed to detect other bootable partitions. 169s Systems on them will not be added to the GRUB boot configuration. 169s Check GRUB_DISABLE_OS_PROBER documentation entry. 169s Adding boot menu entry for UEFI Firmware Settings ... 169s done 169s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 169s Removing linux-modules-extra-6.12.0-16-generic (6.12.0-16.16) ... 171s Removing linux-modules-6.12.0-16-generic (6.12.0-16.16) ... 171s Removing linux-tools-6.12.0-16-generic (6.12.0-16.16) ... 171s Removing linux-tools-6.12.0-16 (6.12.0-16.16) ... 171s Processing triggers for libc-bin (2.41-1ubuntu1) ... 171s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76972 files and directories currently installed.) 171s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 171s Purging configuration files for libpython3.12-minimal:amd64 (3.12.9-1) ... 171s Purging configuration files for linux-modules-extra-6.12.0-16-generic (6.12.0-16.16) ... 171s Purging configuration files for linux-modules-6.12.0-16-generic (6.12.0-16.16) ... 171s dpkg: warning: while removing linux-modules-6.12.0-16-generic, directory '/lib/modules/6.12.0-16-generic' not empty so not removed 171s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 171s Purging configuration files for linux-image-6.12.0-16-generic (6.12.0-16.16) ... 171s rmdir: failed to remove '/lib/modules/6.12.0-16-generic': Directory not empty 171s autopkgtest [01:45:05]: upgrading testbed (apt dist-upgrade and autopurge) 172s Reading package lists... 172s Building dependency tree... 172s Reading state information... 172s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 172s Starting 2 pkgProblemResolver with broken count: 0 172s Done 173s Entering ResolveByKeep 173s 173s Calculating upgrade... 173s The following packages will be upgraded: 173s libpng16-16t64 174s 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 174s Need to get 217 kB of archives. 174s After this operation, 0 B of additional disk space will be used. 174s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpng16-16t64 amd64 1.6.47-1.1 [217 kB] 174s Fetched 217 kB in 0s (480 kB/s) 174s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 174s Preparing to unpack .../libpng16-16t64_1.6.47-1.1_amd64.deb ... 174s Unpacking libpng16-16t64:amd64 (1.6.47-1.1) over (1.6.47-1) ... 174s Setting up libpng16-16t64:amd64 (1.6.47-1.1) ... 174s Processing triggers for libc-bin (2.41-1ubuntu1) ... 175s Reading package lists... 175s Building dependency tree... 175s Reading state information... 175s Starting pkgProblemResolver with broken count: 0 175s Starting 2 pkgProblemResolver with broken count: 0 175s Done 175s Solving dependencies... 176s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 176s autopkgtest [01:45:10]: rebooting testbed after setup commands that affected boot 200s autopkgtest [01:45:34]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP PREEMPT_DYNAMIC Wed Mar 12 16:07:00 UTC 2025 203s autopkgtest [01:45:37]: @@@@@@@@@@@@@@@@@@@@ apt-source lammps 219s Get:1 http://ftpmaster.internal/ubuntu plucky/universe lammps 20240207+dfsg-3build3 (dsc) [3182 B] 219s Get:2 http://ftpmaster.internal/ubuntu plucky/universe lammps 20240207+dfsg-3build3 (tar) [153 MB] 219s Get:3 http://ftpmaster.internal/ubuntu plucky/universe lammps 20240207+dfsg-3build3 (diff) [17.4 kB] 220s gpgv: Signature made Tue Feb 25 20:55:58 2025 UTC 220s gpgv: using RSA key B8340990283D8D9BC1949AC74799A35146D12B35 220s gpgv: Can't check signature: No public key 220s dpkg-source: warning: cannot verify inline signature for ./lammps_20240207+dfsg-3build3.dsc: no acceptable signature found 225s autopkgtest [01:45:59]: testing package lammps version 20240207+dfsg-3build3 226s autopkgtest [01:46:00]: build not needed 250s autopkgtest [01:46:24]: test crack: preparing testbed 250s Reading package lists... 250s Building dependency tree... 250s Reading state information... 250s Starting pkgProblemResolver with broken count: 0 250s Starting 2 pkgProblemResolver with broken count: 0 250s Done 251s The following NEW packages will be installed: 251s fontconfig-config fonts-dejavu-core fonts-dejavu-mono lammps lammps-data 251s libaec0 libamd-comgr2 libamdhip64-5 libblas3 libcairo2 libdeflate0 251s libdouble-conversion3 libdrm-intel1 libevent-pthreads-2.1-7t64 libfabric1 251s libfftw3-double3 libfontconfig1 libgbm1 libgfortran5 libgl1 libgl1-mesa-dri 251s libgl2ps1.4 libglew2.2 libglvnd0 libglx-mesa0 libglx0 libgomp1 libhdf5-310 251s libhdf5-hl-310 libhsa-runtime64-1 libhsakmt1 libhwloc-plugins libhwloc15 251s libibmad5 libibumad3 libjbig0 libjpeg-turbo8 libjpeg8 libjsoncpp26 251s libkim-api2 liblammps0t64 liblapack3 liblerc4 libllvm17t64 libmunge2 251s libnetcdf22 libogg0 libopengl0 libopenmpi40 libpciaccess0 libpixman-1-0 251s libpmix2t64 libpnetcdf6 libproj25 libpsm-infinipath1 libpsm2-2 librdmacm1t64 251s libsharpyuv0 libsz2 libtbb12 libtbbbind-2-5 libtbbmalloc2 libtcl8.6 251s libtheoradec1 libtheoraenc1 libtiff6 libtk8.6 libucx0 libvoro++1 libvtk9.3 251s libvulkan1 libwayland-server0 libwebp7 libx11-xcb1 libxcb-dri3-0 libxcb-glx0 251s libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 251s libxcb-xfixes0 libxft2 libxnvctrl0 libxrender1 libxshmfence1 libxss1 251s libxxf86vm1 mesa-libgallium mpi-default-bin ocl-icd-libopencl1 openmpi-bin 251s openmpi-common proj-data x11-common 251s 0 upgraded, 95 newly installed, 0 to remove and 0 not upgraded. 251s Need to get 139 MB of archives. 251s After this operation, 606 MB of additional disk space will be used. 251s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 252s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 252s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-2ubuntu1 [37.4 kB] 252s Get:4 http://ftpmaster.internal/ubuntu plucky/universe amd64 lammps-data all 20240207+dfsg-3build3 [9732 kB] 252s Get:5 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 252s Get:6 http://ftpmaster.internal/ubuntu plucky/universe amd64 libllvm17t64 amd64 1:17.0.6-21 [26.0 MB] 254s Get:7 http://ftpmaster.internal/ubuntu plucky/universe amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3build2 [14.4 MB] 255s Get:8 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhsakmt1 amd64 5.7.0-1build1 [62.9 kB] 255s Get:9 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhsa-runtime64-1 amd64 5.7.1-2build1 [491 kB] 255s Get:10 http://ftpmaster.internal/ubuntu plucky/universe amd64 libamdhip64-5 amd64 5.7.1-5 [9643 kB] 255s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 256s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-2ubuntu1 [164 kB] 256s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 256s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 256s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 256s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 256s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 256s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB] 256s Get:19 http://ftpmaster.internal/ubuntu plucky/universe amd64 libdouble-conversion3 amd64 3.3.1-1 [41.7 kB] 256s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libpciaccess0 amd64 0.17-3build1 [18.6 kB] 256s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libdrm-intel1 amd64 2.4.123-1 [68.8 kB] 256s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10 [7966 B] 256s Get:23 http://ftpmaster.internal/ubuntu plucky/universe amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.3build1 [178 kB] 256s Get:24 http://ftpmaster.internal/ubuntu plucky/universe amd64 libpsm2-2 amd64 11.2.185-2.1 [193 kB] 256s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 librdmacm1t64 amd64 55.0-1ubuntu1 [71.5 kB] 256s Get:26 http://ftpmaster.internal/ubuntu plucky/universe amd64 libfabric1 amd64 1.17.0-3.1 [789 kB] 256s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 15-20250222-0ubuntu1 [148 kB] 256s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libfftw3-double3 amd64 3.3.10-2fakesync1build1 [839 kB] 256s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libwayland-server0 amd64 1.23.1-3 [37.2 kB] 256s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libx11-xcb1 amd64 2:1.8.10-2 [7944 B] 256s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-dri3-0 amd64 1.17.0-2 [7508 B] 256s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-present0 amd64 1.17.0-2 [6064 B] 256s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-randr0 amd64 1.17.0-2 [17.9 kB] 256s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-sync1 amd64 1.17.0-2 [9312 B] 256s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-xfixes0 amd64 1.17.0-2 [10.2 kB] 256s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libxshmfence1 amd64 1.3-1build5 [4764 B] 256s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 mesa-libgallium amd64 25.0.1-2ubuntu1 [12.1 MB] 256s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libgbm1 amd64 25.0.1-2ubuntu1 [33.4 kB] 256s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 15-20250222-0ubuntu1 [919 kB] 256s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libvulkan1 amd64 1.4.304.0-1 [147 kB] 256s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libgl1-mesa-dri amd64 25.0.1-2ubuntu1 [35.7 kB] 256s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libglvnd0 amd64 1.7.0-1build1 [69.6 kB] 256s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-glx0 amd64 1.17.0-2 [24.8 kB] 256s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libxxf86vm1 amd64 1:1.1.4-1build4 [9282 B] 256s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libglx-mesa0 amd64 25.0.1-2ubuntu1 [146 kB] 256s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libglx0 amd64 1.7.0-1build1 [38.6 kB] 256s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libgl1 amd64 1.7.0-1build1 [102 kB] 256s Get:48 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgl2ps1.4 amd64 1.4.2+dfsg1-2build1 [41.9 kB] 256s Get:49 http://ftpmaster.internal/ubuntu plucky/universe amd64 libglew2.2 amd64 2.2.0-4build1 [187 kB] 256s Get:50 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 256s Get:51 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-310 amd64 1.14.5+repack-3 [1519 kB] 256s Get:52 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-310 amd64 1.14.5+repack-3 [62.6 kB] 256s Get:53 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhwloc15 amd64 2.12.0-1 [194 kB] 256s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 256s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 256s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libjsoncpp26 amd64 1.9.6-3 [90.0 kB] 256s Get:57 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkim-api2 amd64 2.3.0-1ubuntu1 [588 kB] 256s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 257s Get:59 http://ftpmaster.internal/ubuntu plucky/universe amd64 libnetcdf22 amd64 1:4.9.3-1 [574 kB] 257s Get:60 http://ftpmaster.internal/ubuntu plucky/universe amd64 libmunge2 amd64 0.5.16-1 [16.5 kB] 257s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libxnvctrl0 amd64 510.47.03-0ubuntu4 [12.6 kB] 257s Get:62 http://ftpmaster.internal/ubuntu plucky/universe amd64 ocl-icd-libopencl1 amd64 2.3.2-1build1 [38.5 kB] 257s Get:63 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhwloc-plugins amd64 2.12.0-1 [16.0 kB] 257s Get:64 http://ftpmaster.internal/ubuntu plucky/universe amd64 libpmix2t64 amd64 5.0.6-5 [714 kB] 257s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libibumad3 amd64 55.0-1ubuntu1 [29.7 kB] 257s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libibmad5 amd64 55.0-1ubuntu1 [42.7 kB] 257s Get:67 http://ftpmaster.internal/ubuntu plucky/universe amd64 libucx0 amd64 1.18.1+ds-2 [1293 kB] 257s Get:68 http://ftpmaster.internal/ubuntu plucky/universe amd64 libopenmpi40 amd64 5.0.7-1 [2526 kB] 257s Get:69 http://ftpmaster.internal/ubuntu plucky/universe amd64 libpnetcdf6 amd64 1.14.0-2 [1059 kB] 257s Get:70 http://ftpmaster.internal/ubuntu plucky/universe amd64 libvoro++1 amd64 0.5+revert-to-0.4.6+dfsg1-1 [119 kB] 257s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libogg0 amd64 1.3.5-3build1 [22.7 kB] 257s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 libopengl0 amd64 1.7.0-1build1 [32.8 kB] 257s Get:73 http://ftpmaster.internal/ubuntu plucky/universe amd64 proj-data all 9.5.1-1 [7924 kB] 257s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 257s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 257s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 257s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 257s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 257s Get:79 http://ftpmaster.internal/ubuntu plucky/universe amd64 libproj25 amd64 9.5.1-1 [1499 kB] 257s Get:80 http://ftpmaster.internal/ubuntu plucky/universe amd64 libtbbbind-2-5 amd64 2022.0.0-2 [15.8 kB] 257s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 libtbbmalloc2 amd64 2022.0.0-2 [55.7 kB] 257s Get:82 http://ftpmaster.internal/ubuntu plucky/universe amd64 libtbb12 amd64 2022.0.0-2 [103 kB] 257s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB] 257s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 libtheoradec1 amd64 1.2.0~alpha1+dfsg-5 [70.2 kB] 257s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libtheoraenc1 amd64 1.2.0~alpha1+dfsg-5 [115 kB] 257s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 257s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 257s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 257s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB] 257s Get:90 http://ftpmaster.internal/ubuntu plucky/universe amd64 libvtk9.3 amd64 9.3.0+dfsg1-4ubuntu1 [25.3 MB] 258s Get:91 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblammps0t64 amd64 20240207+dfsg-3build3 [8393 kB] 258s Get:92 http://ftpmaster.internal/ubuntu plucky/universe amd64 openmpi-common all 5.0.7-1 [97.9 kB] 258s Get:93 http://ftpmaster.internal/ubuntu plucky/universe amd64 openmpi-bin amd64 5.0.7-1 [192 kB] 258s Get:94 http://ftpmaster.internal/ubuntu plucky/universe amd64 mpi-default-bin amd64 1.18 [2510 B] 258s Get:95 http://ftpmaster.internal/ubuntu plucky/universe amd64 lammps amd64 20240207+dfsg-3build3 [15.4 kB] 259s Fetched 139 MB in 7s (18.9 MB/s) 259s Selecting previously unselected package fonts-dejavu-mono. 259s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 259s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8_all.deb ... 259s Unpacking fonts-dejavu-mono (2.37-8) ... 259s Selecting previously unselected package fonts-dejavu-core. 259s Preparing to unpack .../01-fonts-dejavu-core_2.37-8_all.deb ... 259s Unpacking fonts-dejavu-core (2.37-8) ... 259s Selecting previously unselected package fontconfig-config. 259s Preparing to unpack .../02-fontconfig-config_2.15.0-2ubuntu1_amd64.deb ... 259s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 259s Selecting previously unselected package lammps-data. 259s Preparing to unpack .../03-lammps-data_20240207+dfsg-3build3_all.deb ... 259s Unpacking lammps-data (20240207+dfsg-3build3) ... 260s Selecting previously unselected package libaec0:amd64. 260s Preparing to unpack .../04-libaec0_1.1.3-1_amd64.deb ... 260s Unpacking libaec0:amd64 (1.1.3-1) ... 260s Selecting previously unselected package libllvm17t64:amd64. 260s Preparing to unpack .../05-libllvm17t64_1%3a17.0.6-21_amd64.deb ... 260s Unpacking libllvm17t64:amd64 (1:17.0.6-21) ... 260s Selecting previously unselected package libamd-comgr2:amd64. 260s Preparing to unpack .../06-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3build2_amd64.deb ... 260s Unpacking libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3build2) ... 261s Selecting previously unselected package libhsakmt1:amd64. 261s Preparing to unpack .../07-libhsakmt1_5.7.0-1build1_amd64.deb ... 261s Unpacking libhsakmt1:amd64 (5.7.0-1build1) ... 261s Selecting previously unselected package libhsa-runtime64-1. 261s Preparing to unpack .../08-libhsa-runtime64-1_5.7.1-2build1_amd64.deb ... 261s Unpacking libhsa-runtime64-1 (5.7.1-2build1) ... 261s Selecting previously unselected package libamdhip64-5. 261s Preparing to unpack .../09-libamdhip64-5_5.7.1-5_amd64.deb ... 261s Unpacking libamdhip64-5 (5.7.1-5) ... 261s Selecting previously unselected package libblas3:amd64. 261s Preparing to unpack .../10-libblas3_3.12.1-2_amd64.deb ... 261s Unpacking libblas3:amd64 (3.12.1-2) ... 261s Selecting previously unselected package libfontconfig1:amd64. 261s Preparing to unpack .../11-libfontconfig1_2.15.0-2ubuntu1_amd64.deb ... 261s Unpacking libfontconfig1:amd64 (2.15.0-2ubuntu1) ... 261s Selecting previously unselected package libpixman-1-0:amd64. 261s Preparing to unpack .../12-libpixman-1-0_0.44.0-3_amd64.deb ... 261s Unpacking libpixman-1-0:amd64 (0.44.0-3) ... 261s Selecting previously unselected package libxcb-render0:amd64. 261s Preparing to unpack .../13-libxcb-render0_1.17.0-2_amd64.deb ... 261s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 261s Selecting previously unselected package libxcb-shm0:amd64. 261s Preparing to unpack .../14-libxcb-shm0_1.17.0-2_amd64.deb ... 261s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 261s Selecting previously unselected package libxrender1:amd64. 261s Preparing to unpack .../15-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 261s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 261s Selecting previously unselected package libcairo2:amd64. 261s Preparing to unpack .../16-libcairo2_1.18.2-2_amd64.deb ... 261s Unpacking libcairo2:amd64 (1.18.2-2) ... 261s Selecting previously unselected package libdeflate0:amd64. 261s Preparing to unpack .../17-libdeflate0_1.23-1_amd64.deb ... 261s Unpacking libdeflate0:amd64 (1.23-1) ... 261s Selecting previously unselected package libdouble-conversion3:amd64. 261s Preparing to unpack .../18-libdouble-conversion3_3.3.1-1_amd64.deb ... 261s Unpacking libdouble-conversion3:amd64 (3.3.1-1) ... 261s Selecting previously unselected package libpciaccess0:amd64. 261s Preparing to unpack .../19-libpciaccess0_0.17-3build1_amd64.deb ... 261s Unpacking libpciaccess0:amd64 (0.17-3build1) ... 261s Selecting previously unselected package libdrm-intel1:amd64. 261s Preparing to unpack .../20-libdrm-intel1_2.4.123-1_amd64.deb ... 261s Unpacking libdrm-intel1:amd64 (2.4.123-1) ... 261s Selecting previously unselected package libevent-pthreads-2.1-7t64:amd64. 261s Preparing to unpack .../21-libevent-pthreads-2.1-7t64_2.1.12-stable-10_amd64.deb ... 261s Unpacking libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10) ... 261s Selecting previously unselected package libpsm-infinipath1. 261s Preparing to unpack .../22-libpsm-infinipath1_3.3+20.604758e7-6.3build1_amd64.deb ... 261s Unpacking libpsm-infinipath1 (3.3+20.604758e7-6.3build1) ... 261s Selecting previously unselected package libpsm2-2. 261s Preparing to unpack .../23-libpsm2-2_11.2.185-2.1_amd64.deb ... 261s Unpacking libpsm2-2 (11.2.185-2.1) ... 261s Selecting previously unselected package librdmacm1t64:amd64. 261s Preparing to unpack .../24-librdmacm1t64_55.0-1ubuntu1_amd64.deb ... 261s Unpacking librdmacm1t64:amd64 (55.0-1ubuntu1) ... 261s Selecting previously unselected package libfabric1:amd64. 261s Preparing to unpack .../25-libfabric1_1.17.0-3.1_amd64.deb ... 261s Unpacking libfabric1:amd64 (1.17.0-3.1) ... 261s Selecting previously unselected package libgomp1:amd64. 261s Preparing to unpack .../26-libgomp1_15-20250222-0ubuntu1_amd64.deb ... 261s Unpacking libgomp1:amd64 (15-20250222-0ubuntu1) ... 261s Selecting previously unselected package libfftw3-double3:amd64. 261s Preparing to unpack .../27-libfftw3-double3_3.3.10-2fakesync1build1_amd64.deb ... 261s Unpacking libfftw3-double3:amd64 (3.3.10-2fakesync1build1) ... 261s Selecting previously unselected package libwayland-server0:amd64. 261s Preparing to unpack .../28-libwayland-server0_1.23.1-3_amd64.deb ... 261s Unpacking libwayland-server0:amd64 (1.23.1-3) ... 261s Selecting previously unselected package libx11-xcb1:amd64. 261s Preparing to unpack .../29-libx11-xcb1_2%3a1.8.10-2_amd64.deb ... 261s Unpacking libx11-xcb1:amd64 (2:1.8.10-2) ... 261s Selecting previously unselected package libxcb-dri3-0:amd64. 261s Preparing to unpack .../30-libxcb-dri3-0_1.17.0-2_amd64.deb ... 261s Unpacking libxcb-dri3-0:amd64 (1.17.0-2) ... 261s Selecting previously unselected package libxcb-present0:amd64. 261s Preparing to unpack .../31-libxcb-present0_1.17.0-2_amd64.deb ... 261s Unpacking libxcb-present0:amd64 (1.17.0-2) ... 261s Selecting previously unselected package libxcb-randr0:amd64. 261s Preparing to unpack .../32-libxcb-randr0_1.17.0-2_amd64.deb ... 261s Unpacking libxcb-randr0:amd64 (1.17.0-2) ... 261s Selecting previously unselected package libxcb-sync1:amd64. 261s Preparing to unpack .../33-libxcb-sync1_1.17.0-2_amd64.deb ... 261s Unpacking libxcb-sync1:amd64 (1.17.0-2) ... 261s Selecting previously unselected package libxcb-xfixes0:amd64. 261s Preparing to unpack .../34-libxcb-xfixes0_1.17.0-2_amd64.deb ... 261s Unpacking libxcb-xfixes0:amd64 (1.17.0-2) ... 261s Selecting previously unselected package libxshmfence1:amd64. 261s Preparing to unpack .../35-libxshmfence1_1.3-1build5_amd64.deb ... 261s Unpacking libxshmfence1:amd64 (1.3-1build5) ... 261s Selecting previously unselected package mesa-libgallium:amd64. 261s Preparing to unpack .../36-mesa-libgallium_25.0.1-2ubuntu1_amd64.deb ... 261s Unpacking mesa-libgallium:amd64 (25.0.1-2ubuntu1) ... 262s Selecting previously unselected package libgbm1:amd64. 262s Preparing to unpack .../37-libgbm1_25.0.1-2ubuntu1_amd64.deb ... 262s Unpacking libgbm1:amd64 (25.0.1-2ubuntu1) ... 262s Selecting previously unselected package libgfortran5:amd64. 262s Preparing to unpack .../38-libgfortran5_15-20250222-0ubuntu1_amd64.deb ... 262s Unpacking libgfortran5:amd64 (15-20250222-0ubuntu1) ... 262s Selecting previously unselected package libvulkan1:amd64. 262s Preparing to unpack .../39-libvulkan1_1.4.304.0-1_amd64.deb ... 262s Unpacking libvulkan1:amd64 (1.4.304.0-1) ... 262s Selecting previously unselected package libgl1-mesa-dri:amd64. 262s Preparing to unpack .../40-libgl1-mesa-dri_25.0.1-2ubuntu1_amd64.deb ... 262s Unpacking libgl1-mesa-dri:amd64 (25.0.1-2ubuntu1) ... 262s Selecting previously unselected package libglvnd0:amd64. 262s Preparing to unpack .../41-libglvnd0_1.7.0-1build1_amd64.deb ... 262s Unpacking libglvnd0:amd64 (1.7.0-1build1) ... 262s Selecting previously unselected package libxcb-glx0:amd64. 262s Preparing to unpack .../42-libxcb-glx0_1.17.0-2_amd64.deb ... 262s Unpacking libxcb-glx0:amd64 (1.17.0-2) ... 262s Selecting previously unselected package libxxf86vm1:amd64. 262s Preparing to unpack .../43-libxxf86vm1_1%3a1.1.4-1build4_amd64.deb ... 262s Unpacking libxxf86vm1:amd64 (1:1.1.4-1build4) ... 262s Selecting previously unselected package libglx-mesa0:amd64. 262s Preparing to unpack .../44-libglx-mesa0_25.0.1-2ubuntu1_amd64.deb ... 262s Unpacking libglx-mesa0:amd64 (25.0.1-2ubuntu1) ... 262s Selecting previously unselected package libglx0:amd64. 262s Preparing to unpack .../45-libglx0_1.7.0-1build1_amd64.deb ... 262s Unpacking libglx0:amd64 (1.7.0-1build1) ... 262s Selecting previously unselected package libgl1:amd64. 262s Preparing to unpack .../46-libgl1_1.7.0-1build1_amd64.deb ... 262s Unpacking libgl1:amd64 (1.7.0-1build1) ... 262s Selecting previously unselected package libgl2ps1.4. 262s Preparing to unpack .../47-libgl2ps1.4_1.4.2+dfsg1-2build1_amd64.deb ... 262s Unpacking libgl2ps1.4 (1.4.2+dfsg1-2build1) ... 262s Selecting previously unselected package libglew2.2:amd64. 262s Preparing to unpack .../48-libglew2.2_2.2.0-4build1_amd64.deb ... 262s Unpacking libglew2.2:amd64 (2.2.0-4build1) ... 262s Selecting previously unselected package libsz2:amd64. 262s Preparing to unpack .../49-libsz2_1.1.3-1_amd64.deb ... 262s Unpacking libsz2:amd64 (1.1.3-1) ... 262s Selecting previously unselected package libhdf5-310:amd64. 262s Preparing to unpack .../50-libhdf5-310_1.14.5+repack-3_amd64.deb ... 262s Unpacking libhdf5-310:amd64 (1.14.5+repack-3) ... 262s Selecting previously unselected package libhdf5-hl-310:amd64. 262s Preparing to unpack .../51-libhdf5-hl-310_1.14.5+repack-3_amd64.deb ... 262s Unpacking libhdf5-hl-310:amd64 (1.14.5+repack-3) ... 262s Selecting previously unselected package libhwloc15:amd64. 262s Preparing to unpack .../52-libhwloc15_2.12.0-1_amd64.deb ... 262s Unpacking libhwloc15:amd64 (2.12.0-1) ... 262s Selecting previously unselected package libjpeg-turbo8:amd64. 262s Preparing to unpack .../53-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ... 262s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 262s Selecting previously unselected package libjpeg8:amd64. 262s Preparing to unpack .../54-libjpeg8_8c-2ubuntu11_amd64.deb ... 262s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 262s Selecting previously unselected package libjsoncpp26:amd64. 262s Preparing to unpack .../55-libjsoncpp26_1.9.6-3_amd64.deb ... 262s Unpacking libjsoncpp26:amd64 (1.9.6-3) ... 262s Selecting previously unselected package libkim-api2:amd64. 262s Preparing to unpack .../56-libkim-api2_2.3.0-1ubuntu1_amd64.deb ... 262s Unpacking libkim-api2:amd64 (2.3.0-1ubuntu1) ... 262s Selecting previously unselected package liblapack3:amd64. 262s Preparing to unpack .../57-liblapack3_3.12.1-2_amd64.deb ... 262s Unpacking liblapack3:amd64 (3.12.1-2) ... 263s Selecting previously unselected package libnetcdf22:amd64. 263s Preparing to unpack .../58-libnetcdf22_1%3a4.9.3-1_amd64.deb ... 263s Unpacking libnetcdf22:amd64 (1:4.9.3-1) ... 263s Selecting previously unselected package libmunge2:amd64. 263s Preparing to unpack .../59-libmunge2_0.5.16-1_amd64.deb ... 263s Unpacking libmunge2:amd64 (0.5.16-1) 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unselected package libibmad5:amd64. 263s Preparing to unpack .../65-libibmad5_55.0-1ubuntu1_amd64.deb ... 263s Unpacking libibmad5:amd64 (55.0-1ubuntu1) ... 263s Selecting previously unselected package libucx0:amd64. 263s Preparing to unpack .../66-libucx0_1.18.1+ds-2_amd64.deb ... 263s Unpacking libucx0:amd64 (1.18.1+ds-2) ... 263s Selecting previously unselected package libopenmpi40:amd64. 263s Preparing to unpack .../67-libopenmpi40_5.0.7-1_amd64.deb ... 263s Unpacking libopenmpi40:amd64 (5.0.7-1) ... 263s Selecting previously unselected package libpnetcdf6:amd64. 263s Preparing to unpack .../68-libpnetcdf6_1.14.0-2_amd64.deb ... 263s Unpacking libpnetcdf6:amd64 (1.14.0-2) ... 263s Selecting previously unselected package libvoro++1. 263s Preparing to unpack .../69-libvoro++1_0.5+revert-to-0.4.6+dfsg1-1_amd64.deb ... 263s Unpacking libvoro++1 (0.5+revert-to-0.4.6+dfsg1-1) ... 263s Selecting previously unselected package libogg0:amd64. 263s Preparing to unpack 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unpack .../81-libtbb12_2022.0.0-2_amd64.deb ... 263s Unpacking libtbb12:amd64 (2022.0.0-2) ... 264s Selecting previously unselected package libtcl8.6:amd64. 264s Preparing to unpack .../82-libtcl8.6_8.6.16+dfsg-1_amd64.deb ... 264s Unpacking libtcl8.6:amd64 (8.6.16+dfsg-1) ... 264s Selecting previously unselected package libtheoradec1:amd64. 264s Preparing to unpack .../83-libtheoradec1_1.2.0~alpha1+dfsg-5_amd64.deb ... 264s Unpacking libtheoradec1:amd64 (1.2.0~alpha1+dfsg-5) ... 264s Selecting previously unselected package libtheoraenc1:amd64. 264s Preparing to unpack .../84-libtheoraenc1_1.2.0~alpha1+dfsg-5_amd64.deb ... 264s Unpacking libtheoraenc1:amd64 (1.2.0~alpha1+dfsg-5) ... 264s Selecting previously unselected package libxft2:amd64. 264s Preparing to unpack .../85-libxft2_2.3.6-1build1_amd64.deb ... 264s Unpacking libxft2:amd64 (2.3.6-1build1) ... 264s Selecting previously unselected package x11-common. 264s Preparing to unpack .../86-x11-common_1%3a7.7+23ubuntu3_all.deb ... 264s Unpacking x11-common (1:7.7+23ubuntu3) ... 264s Selecting previously unselected package libxss1:amd64. 264s Preparing to unpack .../87-libxss1_1%3a1.2.3-1build3_amd64.deb ... 264s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 264s Selecting previously unselected package libtk8.6:amd64. 264s Preparing to unpack .../88-libtk8.6_8.6.16-1_amd64.deb ... 264s Unpacking libtk8.6:amd64 (8.6.16-1) ... 264s Selecting previously unselected package libvtk9.3:amd64. 264s Preparing to unpack .../89-libvtk9.3_9.3.0+dfsg1-4ubuntu1_amd64.deb ... 264s Unpacking libvtk9.3:amd64 (9.3.0+dfsg1-4ubuntu1) ... 264s Selecting previously unselected package liblammps0t64:amd64. 264s Preparing to unpack .../90-liblammps0t64_20240207+dfsg-3build3_amd64.deb ... 264s Unpacking liblammps0t64:amd64 (20240207+dfsg-3build3) ... 265s Selecting previously unselected package openmpi-common. 265s Preparing to unpack .../91-openmpi-common_5.0.7-1_all.deb ... 265s Unpacking openmpi-common (5.0.7-1) ... 265s Selecting previously unselected package openmpi-bin. 265s Preparing to unpack .../92-openmpi-bin_5.0.7-1_amd64.deb ... 265s Unpacking openmpi-bin (5.0.7-1) ... 265s Selecting previously unselected package mpi-default-bin. 265s Preparing to unpack .../93-mpi-default-bin_1.18_amd64.deb ... 265s Unpacking mpi-default-bin (1.18) ... 265s Selecting previously unselected package lammps. 265s Preparing to unpack .../94-lammps_20240207+dfsg-3build3_amd64.deb ... 265s Unpacking lammps (20240207+dfsg-3build3) ... 265s Setting up libxcb-dri3-0:amd64 (1.17.0-2) ... 265s Setting up libtbbmalloc2:amd64 (2022.0.0-2) ... 265s Setting up libpixman-1-0:amd64 (0.44.0-3) ... 265s Setting up libsharpyuv0:amd64 (1.5.0-0.1) ... 265s Setting up libwayland-server0:amd64 (1.23.1-3) ... 265s Setting up libx11-xcb1:amd64 (2:1.8.10-2) ... 265s Setting up libpciaccess0:amd64 (0.17-3build1) ... 265s Setting up libdouble-conversion3:amd64 (3.3.1-1) ... 265s Setting up libxcb-xfixes0:amd64 (1.17.0-2) ... 265s Setting up libogg0:amd64 (1.3.5-3build1) ... 265s Setting up liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 265s Setting up proj-data (9.5.1-1) ... 265s Setting up libxrender1:amd64 (1:0.9.10-1.1build1) ... 265s Setting up lammps-data (20240207+dfsg-3build3) ... 265s Setting up libxcb-render0:amd64 (1.17.0-2) ... 265s Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10) ... 265s Setting up libglvnd0:amd64 (1.7.0-1build1) ... 265s Setting up libxcb-glx0:amd64 (1.17.0-2) ... 265s Setting up libdrm-intel1:amd64 (2.4.123-1) ... 265s Setting up x11-common (1:7.7+23ubuntu3) ... 265s Setting up libibumad3:amd64 (55.0-1ubuntu1) ... 265s Setting up libdeflate0:amd64 (1.23-1) ... 265s Setting up libxcb-shm0:amd64 (1.17.0-2) ... 265s Setting up libibmad5:amd64 (55.0-1ubuntu1) ... 265s Setting up libgomp1:amd64 (15-20250222-0ubuntu1) ... 265s Setting up libjbig0:amd64 (2.1-6.1ubuntu2) ... 265s Setting up libaec0:amd64 (1.1.3-1) ... 265s Setting up libopengl0:amd64 (1.7.0-1build1) ... 265s Setting up libxxf86vm1:amd64 (1:1.1.4-1build4) ... 265s Setting up libxnvctrl0:amd64 (510.47.03-0ubuntu4) ... 265s Setting up libxcb-present0:amd64 (1.17.0-2) ... 265s Setting up libtheoraenc1:amd64 (1.2.0~alpha1+dfsg-5) ... 265s Setting up libblas3:amd64 (3.12.1-2) ... 265s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 265s Setting up libmunge2:amd64 (0.5.16-1) ... 265s Setting up libllvm17t64:amd64 (1:17.0.6-21) ... 265s Setting up libxcb-sync1:amd64 (1.17.0-2) ... 265s Setting up libjsoncpp26:amd64 (1.9.6-3) ... 265s Setting up fonts-dejavu-mono (2.37-8) ... 265s Setting up libhwloc15:amd64 (2.12.0-1) ... 265s Setting up libtcl8.6:amd64 (8.6.16+dfsg-1) ... 265s Setting up fonts-dejavu-core (2.37-8) ... 265s Setting up libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 265s Setting up libfftw3-double3:amd64 (3.3.10-2fakesync1build1) ... 265s Setting up libgfortran5:amd64 (15-20250222-0ubuntu1) ... 265s Setting up libvulkan1:amd64 (1.4.304.0-1) ... 265s Setting up libwebp7:amd64 (1.5.0-0.1) ... 265s Setting up ocl-icd-libopencl1:amd64 (2.3.2-1build1) ... 265s Setting up libxshmfence1:amd64 (1.3-1build5) ... 265s Setting up libxcb-randr0:amd64 (1.17.0-2) ... 265s Setting up libpsm2-2 (11.2.185-2.1) ... 265s Setting up openmpi-common (5.0.7-1) ... 265s Setting up librdmacm1t64:amd64 (55.0-1ubuntu1) ... 265s Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3build2) ... 265s Setting up libxss1:amd64 (1:1.2.3-1build3) ... 265s Setting up libpsm-infinipath1 (3.3+20.604758e7-6.3build1) ... 265s update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode 265s Setting up libvoro++1 (0.5+revert-to-0.4.6+dfsg1-1) ... 265s Setting up libhsakmt1:amd64 (5.7.0-1build1) ... 265s Setting up libsz2:amd64 (1.1.3-1) ... 265s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 265s Setting up libfabric1:amd64 (1.17.0-3.1) ... 265s Setting up mesa-libgallium:amd64 (25.0.1-2ubuntu1) ... 265s Setting up liblapack3:amd64 (3.12.1-2) ... 265s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 265s Setting up libgbm1:amd64 (25.0.1-2ubuntu1) ... 265s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 265s Setting up libgl1-mesa-dri:amd64 (25.0.1-2ubuntu1) ... 265s Setting up libkim-api2:amd64 (2.3.0-1ubuntu1) ... 265s Setting up libhwloc-plugins:amd64 (2.12.0-1) ... 265s Setting up libtbbbind-2-5:amd64 (2022.0.0-2) ... 265s Setting up libpmix2t64:amd64 (5.0.6-5) ... 265s Setting up libhdf5-310:amd64 (1.14.5+repack-3) ... 265s Setting up libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 265s Setting up libhsa-runtime64-1 (5.7.1-2build1) ... 265s Setting up libfontconfig1:amd64 (2.15.0-2ubuntu1) ... 265s Setting up libhdf5-hl-310:amd64 (1.14.5+repack-3) ... 265s Setting up libxft2:amd64 (2.3.6-1build1) ... 265s Setting up libglx-mesa0:amd64 (25.0.1-2ubuntu1) ... 265s Setting up libglx0:amd64 (1.7.0-1build1) ... 265s Setting up libproj25:amd64 (9.5.1-1) ... 265s Setting up libtk8.6:amd64 (8.6.16-1) ... 265s Setting up libnetcdf22:amd64 (1:4.9.3-1) ... 265s Setting up libtbb12:amd64 (2022.0.0-2) ... 265s Setting up libcairo2:amd64 (1.18.2-2) ... 265s Setting up libgl1:amd64 (1.7.0-1build1) ... 265s Setting up libamdhip64-5 (5.7.1-5) ... 265s Setting up libtheoradec1:amd64 (1.2.0~alpha1+dfsg-5) ... 265s Setting up libglew2.2:amd64 (2.2.0-4build1) ... 265s Setting up libucx0:amd64 (1.18.1+ds-2) ... 265s Setting up libgl2ps1.4 (1.4.2+dfsg1-2build1) ... 265s Setting up libopenmpi40:amd64 (5.0.7-1) ... 265s Setting up libpnetcdf6:amd64 (1.14.0-2) ... 265s Setting up libvtk9.3:amd64 (9.3.0+dfsg1-4ubuntu1) ... 265s Setting up openmpi-bin (5.0.7-1) ... 265s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 265s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 266s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 266s Setting up mpi-default-bin (1.18) ... 266s Setting up liblammps0t64:amd64 (20240207+dfsg-3build3) ... 266s Setting up lammps (20240207+dfsg-3build3) ... 266s Processing triggers for man-db (2.13.0-1) ... 266s Processing triggers for libc-bin (2.41-1ubuntu1) ... 268s autopkgtest [01:46:42]: test crack: [----------------------- 268s LAMMPS (7 Feb 2024 - Update 1) 268s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 268s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 268s using 1 OpenMP thread(s) per MPI task 268s Lattice spacing in x,y,z = 1.1142771 1.9299846 1.1142771 268s Created orthogonal box = (0 0 -0.27856928) to (111.42771 77.199383 0.27856928) 268s 2 by 1 by 1 MPI processor grid 268s Created 8141 atoms 268s using lattice units in orthogonal box = (-0.011142771 -0.0077199383 -0.27856928) to (111.43885 77.207103 0.27856928) 268s create_atoms CPU = 0.002 seconds 268s 302 atoms in group lower 268s 302 atoms in group upper 268s 604 atoms in group boundary 268s 7537 atoms in group mobile 268s 841 atoms in group leftupper 268s 841 atoms in group leftlower 268s Setting atom values ... 268s 841 settings made for type 268s Setting atom values ... 268s 841 settings made for type 268s Setting atom values ... 268s 302 settings made for type 268s Setting atom values ... 268s 302 settings made for type 268s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 268s Generated 0 of 10 mixed pair_coeff terms from geometric mixing rule 268s Neighbor list info ... 268s update: every = 1 steps, delay = 5 steps, check = yes 268s max neighbors/atom: 2000, page size: 100000 268s master list distance cutoff = 2.8 268s ghost atom cutoff = 2.8 268s binsize = 1.4, bins = 80 56 1 268s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 268s (1) pair lj/cut, perpetual 268s attributes: half, newton on 268s pair build: half/bin/atomonly/newton 268s stencil: half/bin/2d 268s bin: standard 268s Setting up Verlet run ... 268s Unit style : lj 268s Current step : 0 268s Time step : 0.003 268s Per MPI rank memory allocation (min/avg/max) = 3.097 | 3.097 | 3.097 Mbytes 268s Step Temp E_pair E_mol TotEng Press Volume 268s 0 0.065993465 -3.2595015 0 -3.1984123 -0.035939913 8605.5917 268s 200 0.060035253 -3.2531886 0 -3.1976149 -0.22757684 8638.5331 268s 400 0.06054278 -3.2510706 0 -3.1950271 -0.42811733 8677.8288 269s 600 0.060576995 -3.246816 0 -3.1907408 -0.60017647 8717.6131 269s 800 0.060802753 -3.2413477 0 -3.1850635 -0.74499308 8756.4512 269s 1000 0.061812114 -3.2349942 0 -3.1777756 -0.87130079 8796.9575 269s 1200 0.06317147 -3.2277552 0 -3.1692783 -0.98010628 8823.1488 269s 1400 0.065125405 -3.2198031 0 -3.1595175 -1.0690179 8858.8358 269s 1600 0.06725411 -3.2111272 0 -3.148871 -1.1440993 8892.6607 269s 1800 0.069389572 -3.2019689 0 -3.137736 -1.199078 8933.7591 269s 2000 0.071276448 -3.1921621 0 -3.1261826 -1.239553 8969.0463 269s 2200 0.073243486 -3.1818809 0 -3.1140805 -1.264839 8997.6559 269s 2400 0.075063494 -3.1711703 0 -3.1016851 -1.2772278 9038.4932 269s 2600 0.076789207 -3.1600658 0 -3.0889832 -1.2754953 9073.4997 269s 2800 0.07875979 -3.1487143 0 -3.0758075 -1.2637926 9106.2245 270s 3000 0.080591853 -3.1372361 0 -3.0626334 -1.2388824 9142.7862 270s 3200 0.08227693 -3.125423 0 -3.0492605 -1.2055283 9169.4322 270s 3400 0.084289444 -3.1136554 0 -3.03563 -1.1672422 9204.8205 270s 3600 0.086720297 -3.1021183 0 -3.0218427 -1.126381 9233.2656 270s 3800 0.089264018 -3.0909262 0 -3.0082959 -1.0899774 9265.4143 270s 4000 0.091377688 -3.0795096 0 -2.9949227 -1.0580229 9297.6799 270s 4200 0.092665135 -3.0678736 0 -2.9820949 -1.0390124 9331.6135 270s 4400 0.09055434 -3.0560482 0 -2.9722234 -1.0323741 9362.2075 270s 4600 0.088763719 -3.0446018 0 -2.9624346 -1.027693 9391.6949 271s 4800 0.089467982 -3.0337452 0 -2.950926 -1.0232092 9427.4155 271s 5000 0.089910902 -3.0237571 0 -2.9405279 -1.0174796 9452.031 271s Loop time of 2.52602 on 2 procs for 5000 steps with 8141 atoms 271s 271s Performance: 513059.542 tau/day, 1979.396 timesteps/s, 16.114 Matom-step/s 271s 95.5% CPU use with 2 MPI tasks x 1 OpenMP threads 271s 271s MPI task timing breakdown: 271s Section | min time | avg time | max time |%varavg| %total 271s --------------------------------------------------------------- 271s Pair | 1.6747 | 1.7221 | 1.7694 | 3.6 | 68.17 271s Neigh | 0.12282 | 0.13075 | 0.13868 | 2.2 | 5.18 271s Comm | 0.32744 | 0.38308 | 0.43872 | 9.0 | 15.17 271s Output | 0.0011178 | 0.00233 | 0.0035421 | 2.5 | 0.09 271s Modify | 0.18225 | 0.18878 | 0.19531 | 1.5 | 7.47 271s Other | | 0.09903 | | | 3.92 271s 271s Nlocal: 4070.5 ave 4085 max 4056 min 271s Histogram: 1 0 0 0 0 0 0 0 0 1 271s Nghost: 207 ave 208 max 206 min 271s Histogram: 1 0 0 0 0 0 0 0 0 1 271s Neighs: 35700 ave 35927 max 35473 min 271s Histogram: 1 0 0 0 0 0 0 0 0 1 271s 271s Total # of neighbors = 71400 271s Ave neighs/atom = 8.7704213 271s Neighbor list builds = 106 271s Dangerous builds = 0 271s Total wall time: 0:00:02 271s LAMMPS (7 Feb 2024 - Update 1) 275s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 275s using 1 OpenMP thread(s) per MPI task 275s Lattice spacing in x,y,z = 1.1142771 1.9299846 1.1142771 275s Created orthogonal box = (0 0 -0.27856928) to (111.42771 77.199383 0.27856928) 275s 1 by 1 by 1 MPI processor grid 275s Created 8141 atoms 275s using lattice units in orthogonal box = (-0.011142771 -0.0077199383 -0.27856928) to (111.43885 77.207103 0.27856928) 275s create_atoms CPU = 0.002 seconds 275s 302 atoms in group lower 275s 302 atoms in group upper 275s 604 atoms in group boundary 275s 7537 atoms in group mobile 275s 841 atoms in group leftupper 275s 841 atoms in group leftlower 275s Setting atom values ... 275s 841 settings made for type 275s Setting atom values ... 275s 841 settings made for type 275s Setting atom values ... 275s 302 settings made for type 275s Setting atom values ... 275s 302 settings made for type 275s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 275s Generated 0 of 10 mixed pair_coeff terms from geometric mixing rule 275s Neighbor list info ... 275s update: every = 1 steps, delay = 5 steps, check = yes 275s max neighbors/atom: 2000, page size: 100000 275s master list distance cutoff = 2.8 275s ghost atom cutoff = 2.8 275s binsize = 1.4, bins = 80 56 1 275s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 275s (1) pair lj/cut, perpetual 275s attributes: half, newton on 275s pair build: half/bin/atomonly/newton 275s stencil: half/bin/2d 275s bin: standard 275s Setting up Verlet run ... 275s Unit style : lj 275s Current step : 0 275s Time step : 0.003 275s Per MPI rank memory allocation (min/avg/max) = 3.112 | 3.112 | 3.112 Mbytes 275s Step Temp E_pair E_mol TotEng Press Volume 275s 0 0.065651733 -3.2595015 0 -3.1987287 -0.036239172 8605.5917 275s 200 0.060086376 -3.2531936 0 -3.1975725 -0.23125026 8638.8101 275s 400 0.060533553 -3.2509973 0 -3.1949623 -0.4305406 8679.2464 275s 600 0.06082965 -3.2466949 0 -3.1903858 -0.6028531 8716.7569 275s 800 0.061677224 -3.2413215 0 -3.1842278 -0.7482749 8756.226 275s 1000 0.062383731 -3.2349273 0 -3.1771796 -0.87425132 8793.1116 275s 1200 0.063709246 -3.2276094 0 -3.1686347 -0.98020161 8828.8863 275s 1400 0.065404552 -3.2196608 0 -3.1591168 -1.0695384 8866.4893 275s 1600 0.067579602 -3.2110378 0 -3.1484804 -1.1456387 8900.6772 275s 1800 0.069324241 -3.2018536 0 -3.1376812 -1.2020999 8933.017 275s 2000 0.071014927 -3.1921108 0 -3.1263733 -1.2430105 8963.9853 275s 2200 0.072992881 -3.1818701 0 -3.1143017 -1.2701297 9004.4136 275s 2400 0.075000723 -3.1712313 0 -3.1018043 -1.2830866 9034.9991 275s 2600 0.076843477 -3.1601004 0 -3.0889675 -1.27924 9072.1325 275s 2800 0.078671706 -3.1487747 0 -3.0759495 -1.2659604 9103.9526 275s 3000 0.080713586 -3.1373277 0 -3.0626123 -1.2440673 9134.552 275s 3200 0.08309469 -3.1260242 0 -3.0491047 -1.214547 9169.0003 275s 3400 0.085424766 -3.1146623 0 -3.0355859 -1.1839326 9206.909 275s 3600 0.087396485 -3.1029493 0 -3.0220477 -1.143412 9233.783 275s 3800 0.089007987 -3.090822 0 -3.0084286 -1.1000791 9259.0348 275s 4000 0.089813071 -3.0794078 0 -2.9962692 -1.062847 9281.82 275s 4200 0.08584753 -3.0668559 0 -2.9873882 -1.037972 9308.8113 275s 4400 0.086197517 -3.0559678 0 -2.9761761 -1.028843 9328.9666 275s 4600 0.086766447 -3.0437627 0 -2.9634443 -1.0208785 9361.9925 275s 4800 0.088195149 -3.0328502 0 -2.9512093 -1.0272063 9395.6122 275s 5000 0.089415266 -3.0228825 0 -2.9401122 -1.0215336 9436.1637 275s Loop time of 3.88204 on 1 procs for 5000 steps with 8141 atoms 275s 275s Performance: 333844.780 tau/day, 1287.981 timesteps/s, 10.485 Matom-step/s 275s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads 275s 275s MPI task timing breakdown: 275s Section | min time | avg time | max time |%varavg| %total 275s --------------------------------------------------------------- 275s Pair | 3.2189 | 3.2189 | 3.2189 | 0.0 | 82.92 275s Neigh | 0.20661 | 0.20661 | 0.20661 | 0.0 | 5.32 275s Comm | 0.0041267 | 0.0041267 | 0.0041267 | 0.0 | 0.11 275s Output | 0.0016856 | 0.0016856 | 0.0016856 | 0.0 | 0.04 275s Modify | 0.34347 | 0.34347 | 0.34347 | 0.0 | 8.85 275s Other | | 0.1073 | | | 2.76 275s 275s Nlocal: 8141 ave 8141 max 8141 min 275s Histogram: 1 0 0 0 0 0 0 0 0 0 275s Nghost: 0 ave 0 max 0 min 275s Histogram: 1 0 0 0 0 0 0 0 0 0 275s Neighs: 71389 ave 71389 max 71389 min 275s Histogram: 1 0 0 0 0 0 0 0 0 0 275s 275s Total # of neighbors = 71389 275s Ave neighs/atom = 8.7690701 275s Neighbor list builds = 100 275s Dangerous builds = 0 275s Total wall time: 0:00:03 275s run: OK 275s autopkgtest [01:46:49]: test crack: -----------------------] 276s autopkgtest [01:46:50]: test crack: - - - - - - - - - - results - - - - - - - - - - 276s crack PASS 276s autopkgtest [01:46:50]: test dipole: preparing testbed 276s Reading package lists... 277s Building dependency tree... 277s Reading state information... 277s Starting pkgProblemResolver with broken count: 0 277s Starting 2 pkgProblemResolver with broken count: 0 277s Done 278s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 279s autopkgtest [01:46:53]: test dipole: [----------------------- 279s LAMMPS (7 Feb 2024 - Update 1) 279s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 279s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 279s using 1 OpenMP thread(s) per MPI task 279s WARNING: Atom style hybrid defines both, per-type and per-atom masses; both must be set, but only per-atom masses will be used (src/atom_vec_hybrid.cpp:132) 279s Lattice spacing in x,y,z = 1.6903085 1.6903085 1.6903085 279s Created orthogonal box = (0 0 -0.84515425) to (16.903085 16.903085 0.84515425) 279s 2 by 1 by 1 MPI processor grid 279s Created 200 atoms 279s using lattice units in orthogonal box = (0 0 -0.84515425) to (16.903085 16.903085 0.84515425) 279s create_atoms CPU = 0.001 seconds 279s Setting atom values ... 279s 200 settings made for mass 279s Setting atom values ... 279s 200 settings made for dipole/random 279s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 279s Neighbor list info ... 279s update: every = 1 steps, delay = 0 steps, check = yes 279s max neighbors/atom: 2000, page size: 100000 279s master list distance cutoff = 2.8 279s ghost atom cutoff = 2.8 279s binsize = 1.4, bins = 13 13 2 279s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 279s (1) pair lj/cut/dipole/cut, perpetual 279s attributes: half, newton on 279s pair build: half/bin/atomonly/newton 279s stencil: half/bin/2d 279s bin: standard 279s Setting up Verlet run ... 279s Unit style : lj 279s Current step : 0 279s Time step : 0.005 279s Per MPI rank memory allocation (min/avg/max) = 5.049 | 5.049 | 5.049 Mbytes 279s Step Temp E_pair c_erot TotEng Press 279s 0 0 -2.1909822 0 -2.1909822 -2.5750971 279s 500 0.39335419 -2.7940623 0.20683255 -2.4026749 -0.24768899 279s 1000 0.45259485 -2.8743423 0.22311811 -2.4240104 -0.14864606 279s 1500 0.4211022 -2.8019061 0.19532181 -2.3829095 0.18067145 279s 2000 0.39019874 -2.7914862 0.22407011 -2.4032384 -0.40912648 279s 2500 0.40189542 -2.8134715 0.24278607 -2.4135855 -0.33547386 279s 3000 0.45253597 -2.8432831 0.22668907 -2.3930098 0.031945804 279s 3500 0.45543566 -2.80999 0.19086399 -2.3568315 0.029485295 279s 4000 0.40085091 -2.7761517 0.21847799 -2.3773051 -0.033769965 279s 4500 0.40189931 -2.7615835 0.20362841 -2.3616937 -0.17414063 279s 5000 0.41734987 -2.7649581 0.19662779 -2.349695 -0.36355203 279s 5500 0.39968404 -2.7679046 0.21787398 -2.370219 -0.2095 279s 6000 0.40475829 -2.8111506 0.26462853 -2.4084161 -0.073266954 279s 6500 0.41521558 -2.7828455 0.21593344 -2.369706 0.044857105 279s 7000 0.37923394 -2.7298781 0.19612107 -2.3525403 -0.41777291 279s 7500 0.42362281 -2.8061905 0.22489406 -2.3846858 0.26268515 280s 8000 0.43091638 -2.8618864 0.27325823 -2.4331247 -0.4441066 280s 8500 0.4921082 -2.8591309 0.21247682 -2.3694833 -0.1929702 280s 9000 0.42828025 -2.7900322 0.20827254 -2.3638934 -0.29757579 280s 9500 0.41689981 -2.7717449 0.21413721 -2.3569296 -0.16341068 280s 10000 0.46694926 -2.8131859 0.21390049 -2.3485714 -0.37713307 280s Loop time of 0.524912 on 2 procs for 10000 steps with 200 atoms 280s 280s Performance: 8229943.172 tau/day, 19050.794 timesteps/s, 3.810 Matom-step/s 280s 99.1% CPU use with 2 MPI tasks x 1 OpenMP threads 280s 280s MPI task timing breakdown: 280s Section | min time | avg time | max time |%varavg| %total 280s --------------------------------------------------------------- 280s Pair | 0.2761 | 0.32369 | 0.37129 | 8.4 | 61.67 280s Neigh | 0.014964 | 0.016973 | 0.018982 | 1.5 | 3.23 280s Comm | 0.080257 | 0.13171 | 0.18316 | 14.2 | 25.09 280s Output | 0.00041991 | 0.00084024 | 0.0012606 | 0.0 | 0.16 280s Modify | 0.023049 | 0.027934 | 0.032818 | 2.9 | 5.32 280s Other | | 0.02376 | | | 4.53 280s 280s Nlocal: 100 ave 101 max 99 min 280s Histogram: 1 0 0 0 0 0 0 0 0 1 280s Nghost: 129 ave 129 max 129 min 280s Histogram: 2 0 0 0 0 0 0 0 0 0 280s Neighs: 827.5 ave 843 max 812 min 280s Histogram: 1 0 0 0 0 0 0 0 0 1 280s 280s Total # of neighbors = 1655 280s Ave neighs/atom = 8.275 280s Neighbor list builds = 679 280s Dangerous builds = 0 280s Total wall time: 0:00:00 280s LAMMPS (7 Feb 2024 - Update 1) 281s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 281s using 1 OpenMP thread(s) per MPI task 281s WARNING: Atom style hybrid defines both, per-type and per-atom masses; both must be set, but only per-atom masses will be used (src/atom_vec_hybrid.cpp:132) 281s Lattice spacing in x,y,z = 1.6903085 1.6903085 1.6903085 281s Created orthogonal box = (0 0 -0.84515425) to (16.903085 16.903085 0.84515425) 281s 1 by 1 by 1 MPI processor grid 281s Created 200 atoms 281s using lattice units in orthogonal box = (0 0 -0.84515425) to (16.903085 16.903085 0.84515425) 281s create_atoms CPU = 0.001 seconds 281s Setting atom values ... 281s 200 settings made for mass 281s Setting atom values ... 281s 200 settings made for dipole/random 281s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 281s Neighbor list info ... 281s update: every = 1 steps, delay = 0 steps, check = yes 281s max neighbors/atom: 2000, page size: 100000 281s master list distance cutoff = 2.8 281s ghost atom cutoff = 2.8 281s binsize = 1.4, bins = 13 13 2 281s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 281s (1) pair lj/cut/dipole/cut, perpetual 281s attributes: half, newton on 281s pair build: half/bin/atomonly/newton 281s stencil: half/bin/2d 281s bin: standard 281s Setting up Verlet run ... 281s Unit style : lj 281s Current step : 0 281s Time step : 0.005 281s Per MPI rank memory allocation (min/avg/max) = 5.05 | 5.05 | 5.05 Mbytes 281s Step Temp E_pair c_erot TotEng Press 281s 0 0 -2.1909822 0 -2.1909822 -2.5750971 281s 500 0.39335419 -2.7940623 0.20683255 -2.4026749 -0.24768899 281s 1000 0.45259485 -2.8743423 0.22311811 -2.4240104 -0.14864606 281s 1500 0.42110221 -2.8019062 0.19532181 -2.3829095 0.18067141 281s 2000 0.39019964 -2.7914873 0.2240704 -2.4032387 -0.40914108 281s 2500 0.40258219 -2.8140936 0.24274448 -2.4135243 -0.33941924 281s 3000 0.41800133 -2.8282056 0.24466746 -2.4122942 -0.090527465 281s 3500 0.40116089 -2.7573067 0.18791549 -2.3581517 -0.10988473 281s 4000 0.44069383 -2.8320262 0.23306586 -2.3935358 -0.16090586 281s 4500 0.39984934 -2.7780055 0.2316558 -2.3801554 -0.060493508 281s 5000 0.38478499 -2.7506484 0.22192236 -2.3677873 -0.20522733 281s 5500 0.41563657 -2.7772758 0.21967501 -2.3637174 -0.21224098 281s 6000 0.4784307 -2.8050644 0.19178566 -2.3290259 -0.084370417 281s 6500 0.45915752 -2.8043874 0.21761744 -2.3475257 0.044744498 281s 7000 0.45492064 -2.7795535 0.20340455 -2.3269074 -0.027924625 281s 7500 0.41266295 -2.7515872 0.22903767 -2.3409876 -0.43730101 281s 8000 0.41905675 -2.7281536 0.19413869 -2.3111921 -0.020762772 281s 8500 0.42951176 -2.7616497 0.22863785 -2.3342855 -0.18867239 281s 9000 0.42532413 -2.748856 0.21378021 -2.3256584 0.015079949 281s 9500 0.42237159 -2.7266142 0.20255034 -2.3063545 -0.15538561 281s 10000 0.40758268 -2.778401 0.2746675 -2.3728562 -0.20811978 281s Loop time of 0.749026 on 1 procs for 10000 steps with 200 atoms 281s 281s Performance: 5767487.183 tau/day, 13350.665 timesteps/s, 2.670 Matom-step/s 281s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads 281s 281s MPI task timing breakdown: 281s Section | min time | avg time | max time |%varavg| %total 281s --------------------------------------------------------------- 281s Pair | 0.61592 | 0.61592 | 0.61592 | 0.0 | 82.23 281s Neigh | 0.031974 | 0.031974 | 0.031974 | 0.0 | 4.27 281s Comm | 0.037659 | 0.037659 | 0.037659 | 0.0 | 5.03 281s Output | 0.00043521 | 0.00043521 | 0.00043521 | 0.0 | 0.06 281s Modify | 0.049966 | 0.049966 | 0.049966 | 0.0 | 6.67 281s Other | | 0.01308 | | | 1.75 281s 281s Nlocal: 200 ave 200 max 200 min 281s Histogram: 1 0 0 0 0 0 0 0 0 0 281s Nghost: 162 ave 162 max 162 min 281s Histogram: 1 0 0 0 0 0 0 0 0 0 281s Neighs: 1625 ave 1625 max 1625 min 281s Histogram: 1 0 0 0 0 0 0 0 0 0 281s 281s Total # of neighbors = 1625 281s Ave neighs/atom = 8.125 281s Neighbor list builds = 673 281s Dangerous builds = 0 281s Total wall time: 0:00:00 281s run: OK 281s autopkgtest [01:46:55]: test dipole: -----------------------] 282s autopkgtest [01:46:56]: test dipole: - - - - - - - - - - results - - - - - - - - - - 282s dipole PASS 282s autopkgtest [01:46:56]: test ellipse: preparing testbed 282s Reading package lists... 282s Building dependency tree... 282s Reading state information... 283s Starting pkgProblemResolver with broken count: 0 283s Starting 2 pkgProblemResolver with broken count: 0 283s Done 283s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 284s autopkgtest [01:46:58]: test ellipse: [----------------------- 284s LAMMPS (7 Feb 2024 - Update 1) 284s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 284s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 284s using 1 OpenMP thread(s) per MPI task 284s Lattice spacing in x,y,z = 7.0710678 7.0710678 7.0710678 284s Created orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 284s 2 by 1 by 1 MPI processor grid 284s Created 400 atoms 284s using lattice units in orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 284s create_atoms CPU = 0.000 seconds 284s Setting atom values ... 284s 45 settings made for type/fraction 284s Setting atom values ... 284s 355 settings made for mass 284s Setting atom values ... 284s 45 settings made for mass 284s Setting atom values ... 284s 355 settings made for shape 284s Setting atom values ... 284s 45 settings made for shape 284s Setting atom values ... 284s 400 settings made for quat/random 284s 355 atoms in group spheroid 284s 284s CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE 284s 284s Your simulation uses code contributions which should be cited: 284s - pair gayberne command: doi:10.1063/1.3058435 284s The log file lists these citations in BibTeX format. 284s 284s CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE 284s 284s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 284s Neighbor list info ... 284s update: every = 1 steps, delay = 0 steps, check = yes 284s max neighbors/atom: 2000, page size: 100000 284s master list distance cutoff = 4.8 284s ghost atom cutoff = 4.8 284s binsize = 2.4, bins = 59 59 3 284s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 284s (1) pair gayberne, perpetual 284s attributes: half, newton on 284s pair build: half/bin/atomonly/newton 284s stencil: half/bin/2d 284s bin: standard 284s Setting up Verlet run ... 284s Unit style : lj 284s Current step : 0 284s Time step : 0.002 284s Per MPI rank memory allocation (min/avg/max) = 4.744 | 4.744 | 4.744 Mbytes 284s Step c_rot E_pair TotEng Press Volume 284s 0 2.2718861 0 2.394 0.04788 20000 284s 100 1.7443419 0 1.8381003 0.035765442 20557.278 284s 200 2.2768798 0 2.3992621 0.046544845 20618.928 284s 300 1.8573086 0 1.9571389 0.04239709 18464.842 284s 400 2.1707875 -0.00045989278 2.2870073 0.066725499 13701.839 284s 500 1.9710982 -0.014545321 2.0486111 0.12205188 8490.5214 284s 600 2.0818888 -0.21572832 1.8356955 0.22333255 4697.3035 284s 700 2.1551458 -0.68175426 1.4003368 0.60385996 2541.157 284s 800 1.8879651 -1.6357045 0.21794544 1.0826917 1444.4484 284s 900 2.1993533 -3.0664068 -0.91036919 3.2142529 925.96691 284s 1000 1.4285977 -4.3962037 -2.9651113 3.1830461 744.91324 284s 1100 1.933074 -4.9398703 -3.0147256 1.4694937 715.30906 285s 1200 2.0872875 -4.5711608 -2.4689861 1.4091154 757.68606 285s 1300 1.8950043 -4.1568789 -2.2487345 0.19138859 846.69407 285s 1400 2.1773467 -3.7905723 -1.6164698 0.55639059 930.77026 285s 1500 1.934954 -3.5505876 -1.6187812 0.2572587 1020.2803 285s 1600 2.083004 -3.2707357 -1.1794873 0.68661802 1088.5587 285s 1700 1.9434093 -3.2434441 -1.3043926 0.72465776 1136.9866 285s 1800 1.9731416 -3.2692426 -1.3364608 0.52887379 1162.1022 285s 1900 2.0618126 -3.2264372 -1.162807 0.93455597 1155.8306 285s 2000 1.894614 -3.3964158 -1.4932323 0.69021878 1125.7713 285s Loop time of 0.405384 on 2 procs for 2000 steps with 400 atoms 285s 285s Performance: 852525.151 tau/day, 4933.595 timesteps/s, 1.973 Matom-step/s 285s 98.1% CPU use with 2 MPI tasks x 1 OpenMP threads 285s 285s MPI task timing breakdown: 285s Section | min time | avg time | max time |%varavg| %total 285s --------------------------------------------------------------- 285s Pair | 0.2406 | 0.24299 | 0.24538 | 0.5 | 59.94 285s Neigh | 0.0091656 | 0.010225 | 0.011284 | 1.0 | 2.52 285s Comm | 0.037802 | 0.038865 | 0.039929 | 0.5 | 9.59 285s Output | 0.01407 | 0.014257 | 0.014445 | 0.2 | 3.52 285s Modify | 0.086113 | 0.089917 | 0.093721 | 1.3 | 22.18 285s Other | | 0.009129 | | | 2.25 285s 285s Nlocal: 200 ave 204 max 196 min 285s Histogram: 1 0 0 0 0 0 0 0 0 1 285s Nghost: 198.5 ave 200 max 197 min 285s Histogram: 1 0 0 0 0 0 0 0 0 1 285s Neighs: 1510.5 ave 1546 max 1475 min 285s Histogram: 1 0 0 0 0 0 0 0 0 1 285s 285s Total # of neighbors = 3021 285s Ave neighs/atom = 7.5525 285s Neighbor list builds = 351 285s Dangerous builds = 0 285s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 285s Setting up Verlet run ... 285s Unit style : lj 285s Current step : 2000 285s Time step : 0.002 285s Per MPI rank memory allocation (min/avg/max) = 6.898 | 6.898 | 6.898 Mbytes 285s Step c_rot E_pair TotEng Press Volume 285s 2000 1.894614 -3.3964158 -1.4932323 0.69021878 1125.7713 285s 2100 1.8880098 -3.3875135 -1.4857102 0.21017294 1125.7713 285s 2200 1.9098636 -3.4103342 -1.5286928 0.58806421 1125.7713 285s 2300 1.9069019 -3.4099452 -1.610028 0.63472536 1125.7713 285s 2400 1.9773105 -3.4856993 -1.5268536 0.68904913 1125.7713 285s 2500 2.0027582 -3.5144592 -1.4900205 0.59925284 1125.7713 285s 2600 1.9616624 -3.4744356 -1.5230915 0.26873751 1125.7713 285s 2700 1.8601147 -3.3625731 -1.487211 0.68399849 1125.7713 285s 2800 1.8194349 -3.3190942 -1.5148089 0.6253534 1125.7713 285s 2900 1.8465285 -3.3451867 -1.5508324 0.60146161 1125.7713 285s 3000 1.8894697 -3.3918161 -1.5180286 0.6121204 1125.7713 285s 3100 1.8667782 -3.3664981 -1.5276073 0.54220867 1125.7713 285s 3200 1.8235755 -3.3205753 -1.5178132 0.82786428 1125.7713 285s 3300 1.7937373 -3.2889154 -1.4975068 0.57067419 1125.7713 285s 3400 1.828955 -3.3291496 -1.5067653 1.0360542 1125.7713 285s 3500 1.8536352 -3.3525756 -1.5177124 0.56578139 1125.7713 285s 3600 1.7698175 -3.2647143 -1.5345765 0.50355355 1125.7713 285s 3700 1.7690567 -3.2653073 -1.4812992 0.7916524 1125.7713 285s 3800 1.8637674 -3.3670314 -1.5049293 0.58377083 1125.7713 285s 3900 1.9053975 -3.4123772 -1.4973185 0.64862786 1125.7713 285s 4000 1.878375 -3.3835516 -1.5382418 0.73838477 1125.7713 285s Loop time of 0.394369 on 2 procs for 2000 steps with 400 atoms 285s 285s Performance: 876336.470 tau/day, 5071.392 timesteps/s, 2.029 Matom-step/s 285s 98.9% CPU use with 2 MPI tasks x 1 OpenMP threads 285s 285s MPI task timing breakdown: 285s Section | min time | avg time | max time |%varavg| %total 285s --------------------------------------------------------------- 285s Pair | 0.27227 | 0.28786 | 0.30345 | 2.9 | 72.99 285s Neigh | 0.0027927 | 0.0028813 | 0.0029699 | 0.2 | 0.73 285s Comm | 0.022128 | 0.037688 | 0.053249 | 8.0 | 9.56 285s Output | 0.012391 | 0.012541 | 0.012692 | 0.1 | 3.18 285s Modify | 0.047092 | 0.048275 | 0.049457 | 0.5 | 12.24 285s Other | | 0.00512 | | | 1.30 285s 285s Nlocal: 200 ave 203 max 197 min 285s Histogram: 1 0 0 0 0 0 0 0 0 1 285s Nghost: 207.5 ave 228 max 187 min 285s Histogram: 1 0 0 0 0 0 0 0 0 1 285s Neighs: 1548.5 ave 1608 max 1489 min 285s Histogram: 1 0 0 0 0 0 0 0 0 1 285s 285s Total # of neighbors = 3097 285s Ave neighs/atom = 7.7425 285s Neighbor list builds = 45 285s Dangerous builds = 0 285s Total wall time: 0:00:00 285s LAMMPS (7 Feb 2024 - Update 1) 286s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 286s using 1 OpenMP thread(s) per MPI task 286s Lattice spacing in x,y,z = 7.0710678 7.0710678 7.0710678 286s Created orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 286s 1 by 1 by 1 MPI processor grid 286s Created 400 atoms 286s using lattice units in orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 286s create_atoms CPU = 0.001 seconds 286s Setting atom values ... 286s 45 settings made for type/fraction 286s Setting atom values ... 286s 355 settings made for mass 286s Setting atom values ... 286s 45 settings made for mass 286s Setting atom values ... 286s 355 settings made for shape 286s Setting atom values ... 286s 45 settings made for shape 286s Setting atom values ... 286s 400 settings made for quat/random 286s 355 atoms in group spheroid 286s 286s CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE 286s 286s Your simulation uses code contributions which should be cited: 286s - pair gayberne command: doi:10.1063/1.3058435 286s The log file lists these citations in BibTeX format. 286s 286s CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE 286s 286s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 286s Neighbor list info ... 286s update: every = 1 steps, delay = 0 steps, check = yes 286s max neighbors/atom: 2000, page size: 100000 286s master list distance cutoff = 4.8 286s ghost atom cutoff = 4.8 286s binsize = 2.4, bins = 59 59 3 286s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 286s (1) pair gayberne, perpetual 286s attributes: half, newton on 286s pair build: half/bin/atomonly/newton 286s stencil: half/bin/2d 286s bin: standard 286s Setting up Verlet run ... 286s Unit style : lj 286s Current step : 0 286s Time step : 0.002 286s Per MPI rank memory allocation (min/avg/max) = 4.753 | 4.753 | 4.753 Mbytes 286s Step c_rot E_pair TotEng Press Volume 286s 0 2.2718861 0 2.394 0.04788 20000 286s 100 1.7443419 0 1.8381003 0.035765442 20557.278 286s 200 2.2768798 0 2.3992621 0.046544845 20618.928 286s 300 1.8573086 0 1.9571389 0.04239709 18464.842 286s 400 2.1707875 -0.00045989278 2.2870073 0.066725499 13701.839 286s 500 1.9710982 -0.014545321 2.0486111 0.12205188 8490.5214 286s 600 2.0818888 -0.21572832 1.8356955 0.22333255 4697.3035 286s 700 2.1551458 -0.68175426 1.4003368 0.60385996 2541.157 286s 800 1.8879651 -1.6357045 0.21794544 1.0826917 1444.4484 286s 900 2.1993533 -3.0664068 -0.91036919 3.2142529 925.96691 286s 1000 1.4285977 -4.3962037 -2.9651113 3.1830461 744.91324 286s 1100 1.933074 -4.9398703 -3.0147256 1.4694937 715.30906 286s 1200 2.0872875 -4.5711608 -2.4689861 1.4091154 757.68606 286s 1300 1.8950043 -4.1568789 -2.2487345 0.19138859 846.69407 286s 1400 2.1773467 -3.7905723 -1.6164698 0.55639059 930.77026 286s 1500 1.934954 -3.5505876 -1.6187812 0.2572587 1020.2803 286s 1600 2.083004 -3.2707357 -1.1794873 0.68661802 1088.5587 286s 1700 1.9434093 -3.2434441 -1.3043926 0.72465775 1136.9866 286s 1800 1.9731416 -3.2692426 -1.3364608 0.52887379 1162.1022 286s 1900 2.0618126 -3.2264372 -1.162807 0.93455596 1155.8306 286s 2000 1.894614 -3.3964158 -1.4932323 0.69021875 1125.7713 286s Loop time of 0.691786 on 1 procs for 2000 steps with 400 atoms 286s 286s Performance: 499576.380 tau/day, 2891.067 timesteps/s, 1.156 Matom-step/s 286s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads 286s 286s MPI task timing breakdown: 286s Section | min time | avg time | max time |%varavg| %total 286s --------------------------------------------------------------- 286s Pair | 0.48414 | 0.48414 | 0.48414 | 0.0 | 69.98 287s Neigh | 0.019518 | 0.019518 | 0.019518 | 0.0 | 2.82 287s Comm | 0.0097886 | 0.0097886 | 0.0097886 | 0.0 | 1.41 287s Output | 0.016403 | 0.016403 | 0.016403 | 0.0 | 2.37 287s Modify | 0.15759 | 0.15759 | 0.15759 | 0.0 | 22.78 287s Other | | 0.004347 | | | 0.63 287s 287s Nlocal: 400 ave 400 max 400 min 287s Histogram: 1 0 0 0 0 0 0 0 0 0 287s Nghost: 247 ave 247 max 247 min 287s Histogram: 1 0 0 0 0 0 0 0 0 0 287s Neighs: 3021 ave 3021 max 3021 min 287s Histogram: 1 0 0 0 0 0 0 0 0 0 287s 287s Total # of neighbors = 3021 287s Ave neighs/atom = 7.5525 287s Neighbor list builds = 351 287s Dangerous builds = 0 287s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 287s Setting up Verlet run ... 287s Unit style : lj 287s Current step : 2000 287s Time step : 0.002 287s Per MPI rank memory allocation (min/avg/max) = 6.939 | 6.939 | 6.939 Mbytes 287s Step c_rot E_pair TotEng Press Volume 287s 2000 1.894614 -3.3964158 -1.4932323 0.69021875 1125.7713 287s 2100 1.8880098 -3.3875135 -1.4857102 0.21017294 1125.7713 287s 2200 1.9098635 -3.4103342 -1.5286928 0.58806422 1125.7713 287s 2300 1.9069019 -3.4099452 -1.610028 0.63472566 1125.7713 287s 2400 1.9773106 -3.4856993 -1.5268537 0.6890488 1125.7713 287s 2500 2.0027577 -3.5144587 -1.4900206 0.59925482 1125.7713 287s 2600 1.9616627 -3.4744359 -1.5230914 0.26873643 1125.7713 287s 2700 1.8601143 -3.3625727 -1.4872111 0.68399923 1125.7713 287s 2800 1.8194315 -3.3190907 -1.5148099 0.62535541 1125.7713 287s 2900 1.8465014 -3.3451581 -1.5508257 0.60156027 1125.7713 287s 3000 1.8894895 -3.391836 -1.5180354 0.61205823 1125.7713 287s 3100 1.8668465 -3.3665673 -1.5276094 0.54215927 1125.7713 287s 3200 1.8233438 -3.3203287 -1.5178269 0.82854887 1125.7713 287s 3300 1.794649 -3.2898698 -1.4973919 0.56704285 1125.7713 287s 3400 1.8290008 -3.3295346 -1.5070098 1.0356016 1125.7713 287s 3500 1.8535551 -3.3522046 -1.5121703 0.5801663 1125.7713 287s 3600 1.7849961 -3.2815422 -1.5326244 0.45764466 1125.7713 287s 3700 1.7695363 -3.2652329 -1.4772023 0.84882871 1125.7713 287s 3800 1.8713051 -3.3743092 -1.5234548 0.38004095 1125.7713 287s 3900 1.9336013 -3.4411866 -1.4980326 0.64679675 1125.7713 287s 4000 1.9271117 -3.4346745 -1.5345035 0.4492419 1125.7713 287s Loop time of 0.760385 on 1 procs for 2000 steps with 400 atoms 287s 287s Performance: 454506.722 tau/day, 2630.247 timesteps/s, 1.052 Matom-step/s 287s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads 287s 287s MPI task timing breakdown: 287s Section | min time | avg time | max time |%varavg| %total 287s --------------------------------------------------------------- 287s Pair | 0.61862 | 0.61862 | 0.61862 | 0.0 | 81.36 287s Neigh | 0.0058167 | 0.0058167 | 0.0058167 | 0.0 | 0.76 287s Comm | 0.0109 | 0.0109 | 0.0109 | 0.0 | 1.43 287s Output | 0.020682 | 0.020682 | 0.020682 | 0.0 | 2.72 287s Modify | 0.099944 | 0.099944 | 0.099944 | 0.0 | 13.14 287s Other | | 0.004425 | | | 0.58 287s 287s Nlocal: 400 ave 400 max 400 min 287s Histogram: 1 0 0 0 0 0 0 0 0 0 287s Nghost: 242 ave 242 max 242 min 287s Histogram: 1 0 0 0 0 0 0 0 0 0 287s Neighs: 3080 ave 3080 max 3080 min 287s Histogram: 1 0 0 0 0 0 0 0 0 0 287s 287s Total # of neighbors = 3080 287s Ave neighs/atom = 7.7 287s Neighbor list builds = 45 287s Dangerous builds = 0 287s Total wall time: 0:00:01 287s LAMMPS (7 Feb 2024 - Update 1) 287s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 287s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 287s using 1 OpenMP thread(s) per MPI task 287s Lattice spacing in x,y,z = 7.0710678 7.0710678 7.0710678 287s Created orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 287s 2 by 1 by 1 MPI processor grid 287s Created 400 atoms 287s using lattice units in orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 287s create_atoms CPU = 0.001 seconds 287s Setting atom values ... 287s 45 settings made for type/fraction 287s Setting atom values ... 287s 355 settings made for mass 287s Setting atom values ... 287s 45 settings made for mass 287s Setting atom values ... 287s 355 settings made for shape 287s Setting atom values ... 287s 45 settings made for shape 287s Setting atom values ... 287s 400 settings made for quat/random 287s 355 atoms in group spheroid 287s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 287s Neighbor list info ... 287s update: every = 1 steps, delay = 0 steps, check = yes 287s max neighbors/atom: 2000, page size: 100000 287s master list distance cutoff = 4.8 287s ghost atom cutoff = 4.8 287s binsize = 2.4, bins = 59 59 3 287s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 287s (1) pair resquared, perpetual 287s attributes: half, newton on 287s pair build: half/bin/atomonly/newton 287s stencil: half/bin/2d 287s bin: standard 287s Setting up Verlet run ... 287s Unit style : lj 287s Current step : 0 287s Time step : 0.002 287s Per MPI rank memory allocation (min/avg/max) = 4.744 | 4.744 | 4.744 Mbytes 287s Step c_rot E_pair TotEng Press Volume 287s 0 2.2718861 0 2.394 0.04788 20000 287s 100 1.7443419 0 1.8381003 0.035765442 20557.278 287s 200 2.2768798 0 2.3992621 0.046544845 20618.928 287s 300 1.8573086 0 1.9571389 0.04239709 18464.842 287s 400 2.1706741 -2.5275641e-05 2.2873225 0.066771565 13701.864 287s 500 2.012561 0.0079467721 2.063898 0.10816504 8501.4958 287s 600 2.1428003 0.083982458 2.2020759 0.3340759 4786.6892 287s 700 2.0449292 0.17309565 2.1718849 0.78086274 2774.9262 287s 800 1.9528849 0.31804014 2.2520272 1.8059473 1826.0933 287s 900 1.6296095 0.24347613 1.8589813 1.7120274 1518.1139 287s 1000 1.9349826 0.13913538 2.1125467 1.3044646 1519.7133 288s 1100 2.1040629 0.11218748 2.2384236 1.0097965 1751.5229 288s 1200 1.7801858 0.051922127 1.8564589 0.54836207 2198.0187 288s 1300 2.3147158 0.049339841 2.390002 0.48871848 2754.4057 288s 1400 1.754921 0.025804182 1.785499 0.28804529 3305.8359 288s 1500 2.3701432 0.070771258 2.4523449 0.42290556 3531.1976 288s 1600 1.7628065 0.054682596 1.830609 0.36138713 3319.2576 288s 1700 2.2969598 0.130209 2.454872 0.73541699 2721.9102 288s 1800 1.8253139 0.23039663 2.0810243 1.2065009 2155.7953 288s 1900 2.017999 0.16257657 2.1664889 1.1654021 1815.9914 288s 2000 1.973946 0.17086654 2.1754835 1.2957284 1669.0751 288s Loop time of 0.701506 on 2 procs for 2000 steps with 400 atoms 288s 288s Performance: 492654.408 tau/day, 2851.009 timesteps/s, 1.140 Matom-step/s 288s 98.6% CPU use with 2 MPI tasks x 1 OpenMP threads 288s 288s MPI task timing breakdown: 288s Section | min time | avg time | max time |%varavg| %total 288s --------------------------------------------------------------- 288s Pair | 0.46013 | 0.49809 | 0.53605 | 5.4 | 71.00 288s Neigh | 0.010053 | 0.010359 | 0.010665 | 0.3 | 1.48 288s Comm | 0.036252 | 0.074655 | 0.11306 | 14.1 | 10.64 288s Output | 0.014759 | 0.014964 | 0.015168 | 0.2 | 2.13 288s Modify | 0.091096 | 0.093382 | 0.095669 | 0.7 | 13.31 288s Other | | 0.01006 | | | 1.43 288s 288s Nlocal: 200 ave 206 max 194 min 288s Histogram: 1 0 0 0 0 0 0 0 0 1 288s Nghost: 168.5 ave 169 max 168 min 288s Histogram: 1 0 0 0 0 0 0 0 0 1 288s Neighs: 941 ave 998 max 884 min 288s Histogram: 1 0 0 0 0 0 0 0 0 1 288s 288s Total # of neighbors = 1882 288s Ave neighs/atom = 4.705 288s Neighbor list builds = 415 288s Dangerous builds = 0 288s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 288s Setting up Verlet run ... 288s Unit style : lj 288s Current step : 2000 288s Time step : 0.002 288s Per MPI rank memory allocation (min/avg/max) = 6.889 | 6.889 | 6.889 Mbytes 288s Step c_rot E_pair TotEng Press Volume 288s 2000 1.973946 0.17086654 2.1754835 1.2957284 1669.0751 288s 2100 2.0234333 0.11888043 2.165674 1.056689 1669.0751 288s 2200 1.9652317 0.18018588 2.1288332 1.3191509 1669.0751 288s 2300 1.9982484 0.1453846 2.1438911 1.2670661 1669.0751 288s 2400 1.9752559 0.16967804 2.1177286 1.303768 1669.0751 288s 2500 1.978203 0.16642164 2.1631435 1.2908362 1669.0751 288s 2600 1.9587508 0.18695271 2.1506896 1.3513902 1669.0751 288s 2700 1.9654455 0.17997217 2.1247901 1.3360491 1669.0751 288s 2800 1.9870267 0.15716585 2.1207709 1.2045104 1669.0751 288s 2900 1.9230662 0.224487 2.1353571 1.4964288 1669.0751 288s 3000 2.0042113 0.13903203 2.1149787 1.2100649 1669.0751 289s 3100 1.9543695 0.19149462 2.0984705 1.3409712 1669.0751 289s 3200 1.9991114 0.14441986 2.1292354 1.1756472 1669.0751 289s 3300 1.9629782 0.18246612 2.1463675 1.3162684 1669.0751 289s 3400 1.9403529 0.20630278 2.168704 1.4952817 1669.0751 289s 3500 1.9887414 0.15531284 2.1485278 1.2530438 1669.0751 289s 3600 1.9732705 0.17171749 2.1755758 1.2958612 1669.0751 289s 3700 2.0072859 0.13576438 2.1212392 1.1421261 1669.0751 289s 3800 1.9581319 0.18762046 2.1743395 1.371088 1669.0751 289s 3900 1.9761472 0.16864775 2.1429629 1.3037468 1669.0751 289s 4000 1.9615776 0.18391221 2.1244703 1.4180052 1669.0751 289s Loop time of 1.15887 on 2 procs for 2000 steps with 400 atoms 289s 289s Performance: 298221.416 tau/day, 1725.818 timesteps/s, 690.327 katom-step/s 289s 99.3% CPU use with 2 MPI tasks x 1 OpenMP threads 289s 289s MPI task timing breakdown: 289s Section | min time | avg time | max time |%varavg| %total 289s --------------------------------------------------------------- 289s Pair | 0.85615 | 0.95086 | 1.0456 | 9.7 | 82.05 289s Neigh | 0.0026491 | 0.0027353 | 0.0028214 | 0.2 | 0.24 289s Comm | 0.030191 | 0.12546 | 0.22073 | 26.9 | 10.83 289s Output | 0.017026 | 0.017233 | 0.017441 | 0.2 | 1.49 289s Modify | 0.050688 | 0.052424 | 0.054161 | 0.8 | 4.52 289s Other | | 0.01016 | | | 0.88 289s 289s Nlocal: 200 ave 204 max 196 min 289s Histogram: 1 0 0 0 0 0 0 0 0 1 289s Nghost: 159.5 ave 161 max 158 min 289s Histogram: 1 0 0 0 0 0 0 0 0 1 289s Neighs: 936 ave 1007 max 865 min 289s Histogram: 1 0 0 0 0 0 0 0 0 1 289s 289s Total # of neighbors = 1872 289s Ave neighs/atom = 4.68 289s Neighbor list builds = 50 289s Dangerous builds = 0 289s Total wall time: 0:00:01 289s LAMMPS (7 Feb 2024 - Update 1) 291s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 291s using 1 OpenMP thread(s) per MPI task 291s Lattice spacing in x,y,z = 7.0710678 7.0710678 7.0710678 291s Created orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 291s 1 by 1 by 1 MPI processor grid 291s Created 400 atoms 291s using lattice units in orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 291s create_atoms CPU = 0.001 seconds 291s Setting atom values ... 291s 45 settings made for type/fraction 291s Setting atom values ... 291s 355 settings made for mass 291s Setting atom values ... 291s 45 settings made for mass 291s Setting atom values ... 291s 355 settings made for shape 291s Setting atom values ... 291s 45 settings made for shape 291s Setting atom values ... 291s 400 settings made for quat/random 291s 355 atoms in group spheroid 291s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 291s Neighbor list info ... 291s update: every = 1 steps, delay = 0 steps, check = yes 291s max neighbors/atom: 2000, page size: 100000 291s master list distance cutoff = 4.8 291s ghost atom cutoff = 4.8 291s binsize = 2.4, bins = 59 59 3 291s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 291s (1) pair resquared, perpetual 291s attributes: half, newton on 291s pair build: half/bin/atomonly/newton 291s stencil: half/bin/2d 291s bin: standard 291s Setting up Verlet run ... 291s Unit style : lj 291s Current step : 0 291s Time step : 0.002 291s Per MPI rank memory allocation (min/avg/max) = 4.753 | 4.753 | 4.753 Mbytes 291s Step c_rot E_pair TotEng Press Volume 291s 0 2.2718861 0 2.394 0.04788 20000 291s 100 1.7443419 0 1.8381003 0.035765442 20557.278 291s 200 2.2768798 0 2.3992621 0.046544845 20618.928 291s 300 1.8573086 0 1.9571389 0.04239709 18464.842 291s 400 2.1706741 -2.5275641e-05 2.2873225 0.066771565 13701.864 291s 500 2.012561 0.0079467721 2.063898 0.10816504 8501.4958 291s 600 2.1428003 0.083982458 2.2020759 0.3340759 4786.6892 291s 700 2.0449292 0.17309565 2.1718849 0.78086274 2774.9262 291s 800 1.9528849 0.31804014 2.2520272 1.8059473 1826.0933 291s 900 1.6296095 0.24347613 1.8589813 1.7120274 1518.1139 291s 1000 1.9349826 0.13913538 2.1125467 1.3044646 1519.7133 291s 1100 2.1040629 0.11218748 2.2384236 1.0097965 1751.5229 291s 1200 1.7801858 0.051922127 1.8564589 0.54836207 2198.0187 291s 1300 2.3147158 0.049339841 2.390002 0.48871848 2754.4057 291s 1400 1.754921 0.025804182 1.785499 0.28804529 3305.8359 291s 1500 2.3701432 0.070771258 2.4523449 0.42290556 3531.1976 291s 1600 1.7628065 0.054682596 1.830609 0.36138713 3319.2576 291s 1700 2.2969598 0.130209 2.454872 0.73541699 2721.9102 291s 1800 1.8253139 0.23039663 2.0810243 1.2065009 2155.7953 291s 1900 2.017999 0.16257657 2.1664889 1.1654021 1815.9914 291s 2000 1.973946 0.17086654 2.1754835 1.2957284 1669.0751 291s Loop time of 1.23651 on 1 procs for 2000 steps with 400 atoms 291s 291s Performance: 279495.245 tau/day, 1617.449 timesteps/s, 646.980 katom-step/s 291s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads 291s 291s MPI task timing breakdown: 291s Section | min time | avg time | max time |%varavg| %total 291s --------------------------------------------------------------- 291s Pair | 1.0076 | 1.0076 | 1.0076 | 0.0 | 81.49 291s Neigh | 0.022415 | 0.022415 | 0.022415 | 0.0 | 1.81 291s Comm | 0.0096964 | 0.0096964 | 0.0096964 | 0.0 | 0.78 291s Output | 0.021901 | 0.021901 | 0.021901 | 0.0 | 1.77 291s Modify | 0.1687 | 0.1687 | 0.1687 | 0.0 | 13.64 293s Other | | 0.006174 | | | 0.50 293s 293s Nlocal: 400 ave 400 max 400 min 293s Histogram: 1 0 0 0 0 0 0 0 0 0 293s Nghost: 212 ave 212 max 212 min 293s Histogram: 1 0 0 0 0 0 0 0 0 0 293s Neighs: 1882 ave 1882 max 1882 min 293s Histogram: 1 0 0 0 0 0 0 0 0 0 293s 293s Total # of neighbors = 1882 293s Ave neighs/atom = 4.705 293s Neighbor list builds = 415 293s Dangerous builds = 0 293s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 293s Setting up Verlet run ... 293s Unit style : lj 293s Current step : 2000 293s Time step : 0.002 293s Per MPI rank memory allocation (min/avg/max) = 6.917 | 6.917 | 6.917 Mbytes 293s Step c_rot E_pair TotEng Press Volume 293s 2000 1.973946 0.17086654 2.1754835 1.2957284 1669.0751 293s 2100 2.0234333 0.11888043 2.165674 1.056689 1669.0751 293s 2200 1.9652317 0.18018588 2.1288332 1.3191509 1669.0751 293s 2300 1.9982484 0.1453846 2.1438911 1.2670661 1669.0751 293s 2400 1.9752559 0.16967804 2.1177286 1.303768 1669.0751 293s 2500 1.978203 0.16642164 2.1631435 1.2908362 1669.0751 293s 2600 1.9587508 0.18695272 2.1506896 1.3513902 1669.0751 293s 2700 1.9654455 0.17997217 2.1247901 1.3360491 1669.0751 293s 2800 1.9870267 0.15716584 2.1207709 1.2045103 1669.0751 293s 2900 1.9230661 0.22448715 2.1353571 1.4964295 1669.0751 293s 3000 2.0042113 0.13903205 2.1149788 1.2100651 1669.0751 293s 3100 1.9543696 0.19149451 2.0984704 1.3409708 1669.0751 293s 3200 1.9991114 0.14441986 2.1292353 1.1756471 1669.0751 293s 3300 1.9629782 0.18246604 2.1463674 1.3162682 1669.0751 293s 3400 1.9403526 0.2063031 2.1687041 1.4952828 1669.0751 293s 3500 1.9887417 0.15531257 2.1485281 1.2530419 1669.0751 293s 3600 1.9732713 0.17171668 2.1755748 1.2958589 1669.0751 293s 3700 2.0072841 0.13576627 2.1212376 1.1421332 1669.0751 293s 3800 1.9581293 0.18762314 2.1743434 1.3710999 1669.0751 293s 3900 1.9761567 0.16863762 2.1429558 1.303685 1669.0751 293s 4000 1.9615813 0.18390829 2.1244694 1.4179775 1669.0751 293s Loop time of 1.81935 on 1 procs for 2000 steps with 400 atoms 293s 293s Performance: 189957.896 tau/day, 1099.293 timesteps/s, 439.717 katom-step/s 293s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads 293s 293s MPI task timing breakdown: 293s Section | min time | avg time | max time |%varavg| %total 293s --------------------------------------------------------------- 293s Pair | 1.6825 | 1.6825 | 1.6825 | 0.0 | 92.48 293s Neigh | 0.0046304 | 0.0046304 | 0.0046304 | 0.0 | 0.25 293s Comm | 0.0093091 | 0.0093091 | 0.0093091 | 0.0 | 0.51 293s Output | 0.019207 | 0.019207 | 0.019207 | 0.0 | 1.06 293s Modify | 0.099486 | 0.099486 | 0.099486 | 0.0 | 5.47 293s Other | | 0.004234 | | | 0.23 293s 293s Nlocal: 400 ave 400 max 400 min 293s Histogram: 1 0 0 0 0 0 0 0 0 0 293s Nghost: 206 ave 206 max 206 min 293s Histogram: 1 0 0 0 0 0 0 0 0 0 293s Neighs: 1872 ave 1872 max 1872 min 293s Histogram: 1 0 0 0 0 0 0 0 0 0 293s 293s Total # of neighbors = 1872 293s Ave neighs/atom = 4.68 293s Neighbor list builds = 50 293s Dangerous builds = 0 293s Total wall time: 0:00:03 293s run: OK 293s autopkgtest [01:47:07]: test ellipse: -----------------------] 293s autopkgtest [01:47:07]: test ellipse: - - - - - - - - - - results - - - - - - - - - - 293s ellipse PASS 294s autopkgtest [01:47:08]: test flow: preparing testbed 294s Reading package lists... 294s Building dependency tree... 294s Reading state information... 295s Starting pkgProblemResolver with broken count: 0 295s Starting 2 pkgProblemResolver with broken count: 0 295s Done 295s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 296s autopkgtest [01:47:10]: test flow: [----------------------- 296s LAMMPS (7 Feb 2024 - Update 1) 296s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 296s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 296s using 1 OpenMP thread(s) per MPI task 296s Lattice spacing in x,y,z = 1.2843567 2.2245711 1.2843567 296s Created orthogonal box = (0 0 -0.32108918) to (25.687135 22.245711 0.32108918) 296s 2 by 1 by 1 MPI processor grid 296s Created 420 atoms 296s using lattice units in orthogonal box = (0 -0.0022245711 -0.32108918) to (25.687135 22.247936 0.32108918) 296s create_atoms CPU = 0.001 seconds 296s 60 atoms in group lower 296s 60 atoms in group upper 296s 120 atoms in group boundary 296s 300 atoms in group flow 296s Setting atom values ... 296s 60 settings made for type 296s Setting atom values ... 296s 60 settings made for type 296s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 296s Generated 0 of 3 mixed pair_coeff terms from geometric mixing rule 296s Neighbor list info ... 296s update: every = 1 steps, delay = 5 steps, check = yes 296s max neighbors/atom: 2000, page size: 100000 296s master list distance cutoff = 1.42246 296s ghost atom cutoff = 1.42246 296s binsize = 0.71123, bins = 37 32 1 296s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 296s (1) pair lj/cut, perpetual 296s attributes: half, newton on 296s pair build: half/bin/atomonly/newton 296s stencil: half/bin/2d 296s bin: standard 296s Setting up Verlet run ... 296s Unit style : lj 296s Current step : 0 296s Time step : 0.003 296s Per MPI rank memory allocation (min/avg/max) = 3.044 | 3.044 | 3.044 Mbytes 296s Step Temp E_pair E_mol TotEng Press Volume 296s 0 1 0 0 0.71190476 0.52314537 571.54286 296s 500 1.0951876 -0.33403931 0 0.44562996 3.2502319 571.54286 296s 1000 1 -0.3731019 0 0.33880286 2.8561715 571.54286 296s 1500 1.0366879 -0.36031105 0 0.37771198 3.0196355 571.54286 296s 2000 1 -0.41053 0 0.30137476 2.8651912 571.54286 296s 2500 1.1226657 -0.37033202 0 0.42889907 2.9449242 571.54286 296s 3000 1 -0.37829439 0 0.33361038 2.724957 571.54286 296s 3500 1.0214075 -0.4474262 0 0.27971864 2.4340575 571.54286 296s 4000 1 -0.42466402 0 0.28724075 2.6468652 571.54286 296s 4500 1.0385223 -0.4060451 0 0.33328387 2.8049948 571.54286 296s 5000 1 -0.44140506 0 0.2704997 2.5732992 571.54286 296s 5500 1.0412543 -0.42975001 0 0.31152391 2.5569509 571.54286 296s 6000 1 -0.40966109 0 0.30224367 2.3906115 571.54286 296s 6500 1.0821406 -0.37547129 0 0.39490976 2.5922081 571.54286 297s 7000 1 -0.41060008 0 0.30130468 2.8506205 571.54286 297s 7500 1.0819999 -0.43038503 0 0.33989586 2.6996672 571.54286 297s 8000 1 -0.3796336 0 0.33227116 2.5245689 571.54286 297s 8500 0.94746225 -0.40425285 0 0.27025004 2.5790953 571.54286 297s 9000 1 -0.4061947 0 0.30571006 2.3866707 571.54286 297s 9500 1.0336946 -0.4404991 0 0.29539298 2.2934496 571.54286 297s 10000 1 -0.44465733 0 0.26724744 2.2764313 571.54286 297s Loop time of 0.1156 on 2 procs for 10000 steps with 420 atoms 297s 297s Performance: 22422142.807 tau/day, 86505.181 timesteps/s, 36.332 Matom-step/s 297s 97.2% CPU use with 2 MPI tasks x 1 OpenMP threads 297s 297s MPI task timing breakdown: 297s Section | min time | avg time | max time |%varavg| %total 297s --------------------------------------------------------------- 297s Pair | 0.028605 | 0.028804 | 0.029003 | 0.1 | 24.92 297s Neigh | 0.016147 | 0.016167 | 0.016188 | 0.0 | 13.99 297s Comm | 0.036242 | 0.036373 | 0.036503 | 0.1 | 31.46 297s Output | 0.00028586 | 0.00050491 | 0.00072396 | 0.0 | 0.44 297s Modify | 0.021097 | 0.021361 | 0.021624 | 0.2 | 18.48 297s Other | | 0.01239 | | | 10.72 297s 297s Nlocal: 210 ave 213 max 207 min 297s Histogram: 1 0 0 0 0 0 0 0 0 1 297s Nghost: 50.5 ave 51 max 50 min 297s Histogram: 1 0 0 0 0 0 0 0 0 1 297s Neighs: 480.5 ave 492 max 469 min 297s Histogram: 1 0 0 0 0 0 0 0 0 1 297s 297s Total # of neighbors = 961 297s Ave neighs/atom = 2.2880952 297s Neighbor list builds = 964 297s Dangerous builds = 0 297s Total wall time: 0:00:00 297s LAMMPS (7 Feb 2024 - Update 1) 297s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 297s using 1 OpenMP thread(s) per MPI task 297s Lattice spacing in x,y,z = 1.2843567 2.2245711 1.2843567 297s Created orthogonal box = (0 0 -0.32108918) to (25.687135 22.245711 0.32108918) 297s 1 by 1 by 1 MPI processor grid 297s Created 420 atoms 297s using lattice units in orthogonal box = (0 -0.0022245711 -0.32108918) to (25.687135 22.247936 0.32108918) 297s create_atoms CPU = 0.000 seconds 297s 60 atoms in group lower 297s 60 atoms in group upper 297s 120 atoms in group boundary 297s 300 atoms in group flow 297s Setting atom values ... 297s 60 settings made for type 297s Setting atom values ... 297s 60 settings made for type 297s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 297s Generated 0 of 3 mixed pair_coeff terms from geometric mixing rule 297s Neighbor list info ... 297s update: every = 1 steps, delay = 5 steps, check = yes 297s max neighbors/atom: 2000, page size: 100000 297s master list distance cutoff = 1.42246 297s ghost atom cutoff = 1.42246 297s binsize = 0.71123, bins = 37 32 1 297s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 297s (1) pair lj/cut, perpetual 297s attributes: half, newton on 297s pair build: half/bin/atomonly/newton 297s stencil: half/bin/2d 297s bin: standard 297s Setting up Verlet run ... 297s Unit style : lj 297s Current step : 0 297s Time step : 0.003 297s Per MPI rank memory allocation (min/avg/max) = 3.048 | 3.048 | 3.048 Mbytes 297s Step Temp E_pair E_mol TotEng Press Volume 297s 0 1 0 0 0.71190476 0.52314537 571.54286 297s 500 1.0644427 -0.31382888 0 0.44395296 3.0013076 571.54286 297s 1000 1 -0.42965445 0 0.28225032 2.9612165 571.54286 297s 1500 1.0739874 -0.41189772 0 0.35267901 2.5621951 571.54286 297s 2000 1 -0.40814263 0 0.30376214 2.9229587 571.54286 297s 2500 1.1929729 -0.38735055 0 0.46193257 2.8337691 571.54286 297s 3000 1 -0.44542386 0 0.2664809 2.7214531 571.54286 297s 3500 1.1553179 -0.42687142 0 0.39560493 2.5109633 571.54286 297s 4000 1 -0.40604742 0 0.30585734 2.7055928 571.54286 297s 4500 1.1498154 -0.44055268 0 0.37800642 2.5561154 571.54286 297s 5000 1 -0.41742254 0 0.29448222 2.4788457 571.54286 297s 5500 1.014604 -0.42503236 0 0.29726906 2.579664 571.54286 297s 6000 1 -0.41264837 0 0.29925639 2.5861705 571.54286 297s 6500 1.1443238 -0.4392768 0 0.37537274 2.2801246 571.54286 297s 7000 1 -0.38852754 0 0.32337722 2.3294037 571.54286 297s 7500 1.0568142 -0.42350098 0 0.32885011 2.3953589 571.54286 297s 8000 1 -0.39343 0 0.31847477 2.5701342 571.54286 297s 8500 1.0872157 -0.46282796 0 0.3111661 2.2892446 571.54286 297s 9000 1 -0.402333 0 0.30957177 2.4852035 571.54286 297s 9500 0.99889786 -0.46870263 0 0.24241751 2.3763314 571.54286 297s 10000 1 -0.43338695 0 0.27851782 2.405424 571.54286 297s Loop time of 0.198402 on 1 procs for 10000 steps with 420 atoms 297s 297s Performance: 13064375.476 tau/day, 50402.683 timesteps/s, 21.169 Matom-step/s 297s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads 297s 297s MPI task timing breakdown: 297s Section | min time | avg time | max time |%varavg| %total 297s --------------------------------------------------------------- 297s Pair | 0.078298 | 0.078298 | 0.078298 | 0.0 | 39.46 297s Neigh | 0.04251 | 0.04251 | 0.04251 | 0.0 | 21.43 297s Comm | 0.0074647 | 0.0074647 | 0.0074647 | 0.0 | 3.76 297s Output | 0.00023008 | 0.00023008 | 0.00023008 | 0.0 | 0.12 297s Modify | 0.053693 | 0.053693 | 0.053693 | 0.0 | 27.06 297s Other | | 0.01621 | | | 8.17 297s 297s Nlocal: 420 ave 420 max 420 min 297s Histogram: 1 0 0 0 0 0 0 0 0 0 297s Nghost: 46 ave 46 max 46 min 297s Histogram: 1 0 0 0 0 0 0 0 0 0 297s Neighs: 952 ave 952 max 952 min 297s Histogram: 1 0 0 0 0 0 0 0 0 0 297s 297s Total # of neighbors = 952 297s Ave neighs/atom = 2.2666667 297s Neighbor list builds = 996 297s Dangerous builds = 0 297s Total wall time: 0:00:00 297s LAMMPS (7 Feb 2024 - Update 1) 297s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 297s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 297s using 1 OpenMP thread(s) per MPI task 297s Lattice spacing in x,y,z = 1.2843567 2.2245711 1.2843567 297s Created orthogonal box = (0 0 -0.32108918) to (25.687135 22.245711 0.32108918) 297s 2 by 1 by 1 MPI processor grid 297s Created 420 atoms 297s using lattice units in orthogonal box = (0 -0.0022245711 -0.32108918) to (25.687135 22.247936 0.32108918) 297s create_atoms CPU = 0.001 seconds 297s 60 atoms in group lower 297s 60 atoms in group upper 297s 120 atoms in group boundary 297s 300 atoms in group flow 297s Setting atom values ... 297s 60 settings made for type 297s Setting atom values ... 297s 60 settings made for type 297s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 297s Generated 0 of 3 mixed pair_coeff terms from geometric mixing rule 297s Neighbor list info ... 297s update: every = 1 steps, delay = 5 steps, check = yes 297s max neighbors/atom: 2000, page size: 100000 297s master list distance cutoff = 1.42246 297s ghost atom cutoff = 1.42246 297s binsize = 0.71123, bins = 37 32 1 297s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 297s (1) pair lj/cut, perpetual 297s attributes: half, newton on 297s pair build: half/bin/atomonly/newton 297s stencil: half/bin/2d 297s bin: standard 297s Setting up Verlet run ... 297s Unit style : lj 297s Current step : 0 297s Time step : 0.003 297s Per MPI rank memory allocation (min/avg/max) = 3.044 | 3.044 | 3.044 Mbytes 297s Step Temp E_pair E_mol TotEng Press Volume 297s 0 1 0 0 0.71190476 0.52314537 571.54286 297s 500 1.0758737 -0.36090417 0 0.40501541 2.7822308 575.0659 297s 1000 1 -0.35701441 0 0.35489035 2.0575313 585.71407 297s 1500 1.2368663 -0.37709732 0 0.50343367 1.4865879 587.193 297s 2000 1 -0.39362939 0 0.31827537 1.4236 578.9418 297s 2500 1.2272957 -0.423819 0 0.44989866 1.454461 570.15856 297s 3000 1 -0.49143429 0 0.22047048 1.5345942 554.98632 297s 3500 1.2445009 -0.59762587 0 0.28834022 1.8753189 537.01593 297s 4000 1 -0.69889809 0 0.013006674 2.1402865 521.46673 298s 4500 1.2185161 -0.73848066 0 0.12898676 2.7425317 507.73058 298s 5000 1 -0.79158059 0 -0.079675829 3.1146693 502.02129 298s 5500 1.23812 -0.76063102 0 0.12079254 2.6101517 503.98532 298s 6000 1 -0.68093927 0 0.030965489 2.4050071 506.73975 298s 6500 1.2305347 -0.71537739 0 0.16064612 2.0966847 510.57681 298s 7000 1 -0.69996568 0 0.011939084 2.0829242 513.97036 298s 7500 1.2387996 -0.67617771 0 0.20572962 1.9857051 511.54835 298s 8000 1 -0.72135901 0 -0.0094542445 2.3327964 508.8105 298s 8500 1.2500467 -0.77802894 0 0.11188529 2.2915813 505.72027 298s 9000 1 -0.77033319 0 -0.058428426 2.4993315 503.47206 298s 9500 1.2000703 -0.74305547 0 0.11128027 2.3321564 504.5062 298s 10000 1 -0.72090813 0 -0.0090033642 2.3379679 505.23554 298s Loop time of 0.187509 on 2 procs for 10000 steps with 420 atoms 298s 298s Performance: 13823330.103 tau/day, 53330.749 timesteps/s, 22.399 Matom-step/s 298s 97.9% CPU use with 2 MPI tasks x 1 OpenMP threads 298s 298s MPI task timing breakdown: 298s Section | min time | avg time | max time |%varavg| %total 298s --------------------------------------------------------------- 298s Pair | 0.04304 | 0.043213 | 0.043386 | 0.1 | 23.05 298s Neigh | 0.013056 | 0.013149 | 0.013243 | 0.1 | 7.01 298s Comm | 0.04608 | 0.046587 | 0.047094 | 0.2 | 24.85 298s Output | 0.00041543 | 0.0010024 | 0.0015893 | 1.9 | 0.53 298s Modify | 0.064159 | 0.064266 | 0.064372 | 0.0 | 34.27 298s Other | | 0.01929 | | | 10.29 298s 298s Nlocal: 210 ave 213 max 207 min 298s Histogram: 1 0 0 0 0 0 0 0 0 1 298s Nghost: 50 ave 51 max 49 min 298s Histogram: 1 0 0 0 0 0 0 0 0 1 298s Neighs: 558.5 ave 573 max 544 min 298s Histogram: 1 0 0 0 0 0 0 0 0 1 298s 298s Total # of neighbors = 1117 298s Ave neighs/atom = 2.6595238 298s Neighbor list builds = 562 298s Dangerous builds = 0 298s Total wall time: 0:00:00 298s LAMMPS (7 Feb 2024 - Update 1) 298s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 298s using 1 OpenMP thread(s) per MPI task 298s Lattice spacing in x,y,z = 1.2843567 2.2245711 1.2843567 298s Created orthogonal box = (0 0 -0.32108918) to (25.687135 22.245711 0.32108918) 298s 1 by 1 by 1 MPI processor grid 298s Created 420 atoms 298s using lattice units in orthogonal box = (0 -0.0022245711 -0.32108918) to (25.687135 22.247936 0.32108918) 298s create_atoms CPU = 0.000 seconds 298s 60 atoms in group lower 298s 60 atoms in group upper 298s 120 atoms in group boundary 298s 300 atoms in group flow 298s Setting atom values ... 298s 60 settings made for type 298s Setting atom values ... 298s 60 settings made for type 298s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 298s Generated 0 of 3 mixed pair_coeff terms from geometric mixing rule 298s Neighbor list info ... 298s update: every = 1 steps, delay = 5 steps, check = yes 298s max neighbors/atom: 2000, page size: 100000 298s master list distance cutoff = 1.42246 298s ghost atom cutoff = 1.42246 298s binsize = 0.71123, bins = 37 32 1 298s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 298s (1) pair lj/cut, perpetual 298s attributes: half, newton on 298s pair build: half/bin/atomonly/newton 298s stencil: half/bin/2d 298s bin: standard 298s Setting up Verlet run ... 298s Unit style : lj 298s Current step : 0 298s Time step : 0.003 298s Per MPI rank memory allocation (min/avg/max) = 3.048 | 3.048 | 3.048 Mbytes 298s Step Temp E_pair E_mol TotEng Press Volume 298s 0 1 0 0 0.71190476 0.52314537 571.54286 298s 500 1.0990751 -0.36396768 0 0.41846911 2.522517 575.55806 298s 1000 1 -0.34609791 0 0.36580685 1.9736175 584.67179 298s 1500 1.2112861 -0.39062708 0 0.47169327 1.521881 587.24778 298s 2000 1 -0.39956949 0 0.31233527 1.2496669 583.00676 298s 2500 1.2236323 -0.40128446 0 0.46982521 1.4276891 570.03729 298s 3000 1 -0.48849353 0 0.22341123 1.5091361 553.64637 298s 3500 1.2404547 -0.63017551 0 0.25291012 1.768107 535.22599 298s 4000 1 -0.71545964 0 -0.0035548789 2.2079822 516.73161 298s 4500 1.2270239 -0.78740977 0 0.086114399 2.6094706 503.17906 298s 5000 1 -0.8367971 0 -0.12489233 3.186175 498.73275 298s 5500 1.2257721 -0.77200456 0 0.10062844 2.6369599 502.75573 298s 6000 1 -0.6766551 0 0.035249665 2.2092944 512.08396 298s 6500 1.2201203 -0.67876788 0 0.18984154 1.8784541 517.92079 298s 7000 1 -0.68555696 0 0.026347797 1.8142356 516.44963 298s 7500 1.2482526 -0.7345934 0 0.15404357 2.0253109 511.4042 298s 8000 1 -0.70068231 0 0.011222455 2.1739831 504.55527 298s 8500 1.2151375 -0.77680457 0 0.088257564 2.6264947 498.00946 298s 9000 1 -0.74461165 0 -0.032706889 2.574656 498.14523 298s 9500 1.2047533 -0.75768848 0 0.09998113 2.4174997 501.8877 298s 10000 1 -0.67361996 0 0.038284798 2.2310948 507.57444 298s Loop time of 0.186865 on 1 procs for 10000 steps with 420 atoms 298s 298s Performance: 13870967.169 tau/day, 53514.534 timesteps/s, 22.476 Matom-step/s 298s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads 298s 298s MPI task timing breakdown: 298s Section | min time | avg time | max time |%varavg| %total 298s --------------------------------------------------------------- 298s Pair | 0.065775 | 0.065775 | 0.065775 | 0.0 | 35.20 298s Neigh | 0.020951 | 0.020951 | 0.020951 | 0.0 | 11.21 298s Comm | 0.0049542 | 0.0049542 | 0.0049542 | 0.0 | 2.65 298s Output | 0.00041467 | 0.00041467 | 0.00041467 | 0.0 | 0.22 298s Modify | 0.08233 | 0.08233 | 0.08233 | 0.0 | 44.06 298s Other | | 0.01244 | | | 6.66 298s 298s Nlocal: 420 ave 420 max 420 min 298s Histogram: 1 0 0 0 0 0 0 0 0 0 298s Nghost: 48 ave 48 max 48 min 298s Histogram: 1 0 0 0 0 0 0 0 0 0 298s Neighs: 1124 ave 1124 max 1124 min 298s Histogram: 1 0 0 0 0 0 0 0 0 0 298s 298s Total # of neighbors = 1124 298s Ave neighs/atom = 2.6761905 298s Neighbor list builds = 561 298s Dangerous builds = 0 298s Total wall time: 0:00:00 298s run: OK 299s autopkgtest [01:47:13]: test flow: -----------------------] 299s flow PASS 299s autopkgtest [01:47:13]: test flow: - - - - - - - - - - results - - - - - - - - - - 299s autopkgtest [01:47:13]: test friction: preparing testbed 300s Reading package lists... 300s Building dependency tree... 300s Reading state information... 300s Starting pkgProblemResolver with broken count: 0 300s Starting 2 pkgProblemResolver with broken count: 0 300s Done 301s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 302s autopkgtest [01:47:16]: test friction: [----------------------- 302s LAMMPS (7 Feb 2024 - Update 1) 302s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 302s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 302s using 1 OpenMP thread(s) per MPI task 302s Lattice spacing in x,y,z = 1.1326962 1.9618873 1.1326962 302s Created orthogonal box = (0 0 -0.28317404) to (56.634808 43.161521 0.28317404) 302s 2 by 1 by 1 MPI processor grid 302s Created 750 atoms 302s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 302s create_atoms CPU = 0.001 seconds 302s Created 750 atoms 302s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 302s create_atoms CPU = 0.000 seconds 302s Created 112 atoms 302s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 302s create_atoms CPU = 0.000 seconds 302s Created 112 atoms 302s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 302s create_atoms CPU = 0.000 seconds 302s 750 atoms in group lo 302s 862 atoms in group lo 302s 750 atoms in group hi 302s 862 atoms in group hi 302s 150 atoms in group lo-fixed 302s 150 atoms in group hi-fixed 302s 300 atoms in group boundary 302s 1424 atoms in group mobile 302s Setting atom values ... 302s 150 settings made for type 302s Setting atom values ... 302s 150 settings made for type 302s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 302s Generated 0 of 6 mixed pair_coeff terms from geometric mixing rule 302s Neighbor list info ... 302s update: every = 1 steps, delay = 5 steps, check = yes 302s max neighbors/atom: 2000, page size: 100000 302s master list distance cutoff = 2.8 302s ghost atom cutoff = 2.8 302s binsize = 1.4, bins = 41 31 1 302s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 302s (1) pair lj/cut, perpetual 302s attributes: half, newton on 302s pair build: half/bin/atomonly/newton 302s stencil: half/bin/2d 302s bin: standard 302s Setting up Verlet run ... 302s Unit style : lj 302s Current step : 0 302s Time step : 0.0025 302s Per MPI rank memory allocation (min/avg/max) = 3.05 | 3.05 | 3.05 Mbytes 302s Step Temp E_pair E_mol TotEng Press Volume 302s 0 0.1 -3.1333672 0 -3.0920969 -1.1437663 2444.9333 302s 1000 0.081091635 -3.0930924 0 -3.0596257 -0.030127914 2444.9333 302s 2000 0.082087761 -3.0850474 0 -3.0511696 -0.44306626 2444.9333 302s 3000 0.088948343 -3.08139 0 -3.0446807 -0.25586469 2444.9333 302s 4000 0.091186493 -3.0656845 0 -3.0280515 -0.10060397 2444.9333 303s 5000 0.10802896 -3.0566391 0 -3.0120553 -0.13618814 2444.9333 303s 6000 0.1 -3.0489246 0 -3.0076543 -0.20314787 2444.9333 303s 7000 0.11587092 -3.0413277 0 -2.9935074 -0.37543734 2444.9333 303s 8000 0.1 -3.0296549 0 -2.9883846 -0.41894885 2444.9333 303s 9000 0.11363101 -3.0247314 0 -2.9778355 -0.43224741 2444.9333 303s 10000 0.11551834 -3.0287315 0 -2.9810568 -0.37046468 2444.9333 303s 11000 0.1131303 -3.0177397 0 -2.9710505 -0.48802477 2444.9333 303s 12000 0.1 -3.0280411 0 -2.9867708 -0.23387667 2444.9333 303s 13000 0.11507336 -3.0315952 0 -2.984104 -0.40349366 2444.9333 304s 14000 0.11501583 -3.0318726 0 -2.9844053 -0.31400965 2444.9333 304s 15000 0.10799871 -3.0337962 0 -2.9892248 -0.32505402 2444.9333 304s 16000 0.10673344 -3.0405071 0 -2.9964579 -0.24604448 2444.9333 304s 17000 0.10623843 -3.0391607 0 -2.9953158 -0.44372008 2444.9333 304s 18000 0.11358768 -3.0422681 0 -2.9953901 -0.30148543 2444.9333 304s 19000 0.11591119 -3.0468785 0 -2.9990416 -0.33570287 2444.9333 304s 20000 0.11149703 -3.0428984 0 -2.9968833 -0.34952494 2444.9333 304s Loop time of 2.13543 on 2 procs for 20000 steps with 1724 atoms 304s 304s Performance: 2023007.571 tau/day, 9365.776 timesteps/s, 16.147 Matom-step/s 304s 99.6% CPU use with 2 MPI tasks x 1 OpenMP threads 304s 304s MPI task timing breakdown: 304s Section | min time | avg time | max time |%varavg| %total 304s --------------------------------------------------------------- 304s Pair | 1.2754 | 1.4084 | 1.5414 | 11.2 | 65.95 304s Neigh | 0.11856 | 0.12036 | 0.12217 | 0.5 | 5.64 304s Comm | 0.18008 | 0.31645 | 0.45282 | 24.2 | 14.82 304s Output | 0.00044751 | 0.00094482 | 0.0014421 | 0.0 | 0.04 304s Modify | 0.1887 | 0.19737 | 0.20604 | 2.0 | 9.24 304s Other | | 0.0919 | | | 4.30 304s 304s Nlocal: 862 ave 868 max 856 min 304s Histogram: 1 0 0 0 0 0 0 0 0 1 304s Nghost: 160.5 ave 161 max 160 min 304s Histogram: 1 0 0 0 0 0 0 0 0 1 304s Neighs: 7178.5 ave 7223 max 7134 min 304s Histogram: 1 0 0 0 0 0 0 0 0 1 304s 304s Total # of neighbors = 14357 304s Ave neighs/atom = 8.3277262 304s Neighbor list builds = 716 304s Dangerous builds = 0 304s Total wall time: 0:00:02 305s LAMMPS (7 Feb 2024 - Update 1) 307s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 307s using 1 OpenMP thread(s) per MPI task 307s Lattice spacing in x,y,z = 1.1326962 1.9618873 1.1326962 307s Created orthogonal box = (0 0 -0.28317404) to (56.634808 43.161521 0.28317404) 307s 1 by 1 by 1 MPI processor grid 307s Created 750 atoms 307s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 307s create_atoms CPU = 0.000 seconds 307s Created 750 atoms 307s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 307s create_atoms CPU = 0.000 seconds 307s Created 112 atoms 307s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 307s create_atoms CPU = 0.000 seconds 307s Created 112 atoms 307s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 307s create_atoms CPU = 0.000 seconds 307s 750 atoms in group lo 307s 862 atoms in group lo 307s 750 atoms in group hi 307s 862 atoms in group hi 307s 150 atoms in group lo-fixed 307s 150 atoms in group hi-fixed 307s 300 atoms in group boundary 307s 1424 atoms in group mobile 307s Setting atom values ... 307s 150 settings made for type 307s Setting atom values ... 307s 150 settings made for type 307s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 307s Generated 0 of 6 mixed pair_coeff terms from geometric mixing rule 307s Neighbor list info ... 307s update: every = 1 steps, delay = 5 steps, check = yes 307s max neighbors/atom: 2000, page size: 100000 307s master list distance cutoff = 2.8 307s ghost atom cutoff = 2.8 307s binsize = 1.4, bins = 41 31 1 307s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 307s (1) pair lj/cut, perpetual 307s attributes: half, newton on 307s pair build: half/bin/atomonly/newton 307s stencil: half/bin/2d 307s bin: standard 307s Setting up Verlet run ... 307s Unit style : lj 307s Current step : 0 307s Time step : 0.0025 307s Per MPI rank memory allocation (min/avg/max) = 3.059 | 3.059 | 3.059 Mbytes 307s Step Temp E_pair E_mol TotEng Press Volume 307s 0 0.1 -3.1333672 0 -3.0920969 -1.1437663 2444.9333 307s 1000 0.1 -3.0915072 0 -3.0502369 0.0099866805 2444.9333 307s 2000 0.1 -3.0826007 0 -3.0413304 -0.41998885 2444.9333 307s 3000 0.08982505 -3.0757908 0 -3.0387197 -0.25244271 2444.9333 307s 4000 0.098727892 -3.0666371 0 -3.0258918 -0.25382683 2444.9333 307s 5000 0.11345478 -3.0506905 0 -3.0038674 -0.029177812 2444.9333 307s 6000 0.11386723 -3.0515296 0 -3.0045363 -0.32135016 2444.9333 307s 7000 0.11555642 -3.0379879 0 -2.9902974 -0.40431666 2444.9333 307s 8000 0.10658282 -3.0364048 0 -2.9924178 -0.45722834 2444.9333 307s 9000 0.11650947 -3.0271611 0 -2.9790773 -0.4588819 2444.9333 307s 10000 0.10575546 -3.0298463 0 -2.9862007 -0.35241095 2444.9333 307s 11000 0.10953331 -3.0352955 0 -2.9900908 -0.4622173 2444.9333 307s 12000 0.11720787 -3.0378371 0 -2.989465 -0.27733023 2444.9333 307s 13000 0.11492573 -3.037974 0 -2.9905438 -0.43259084 2444.9333 307s 14000 0.11125454 -3.0413758 0 -2.9954607 -0.31244429 2444.9333 307s 15000 0.10882772 -3.0406062 0 -2.9956927 -0.30403665 2444.9333 307s 16000 0.1152685 -3.0433936 0 -2.9958219 -0.26659294 2444.9333 307s 17000 0.10840025 -3.0414208 0 -2.9966837 -0.36183887 2444.9333 307s 18000 0.11159326 -3.0416392 0 -2.9955843 -0.22725121 2444.9333 307s 19000 0.11530974 -3.0457005 0 -2.9981118 -0.36488457 2444.9333 307s 20000 0.1131733 -3.0417814 0 -2.9950744 -0.27902539 2444.9333 307s Loop time of 2.775 on 1 procs for 20000 steps with 1724 atoms 307s 307s Performance: 1556757.992 tau/day, 7207.213 timesteps/s, 12.425 Matom-step/s 307s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads 307s 307s MPI task timing breakdown: 307s Section | min time | avg time | max time |%varavg| %total 307s --------------------------------------------------------------- 307s Pair | 2.1889 | 2.1889 | 2.1889 | 0.0 | 78.88 307s Neigh | 0.17648 | 0.17648 | 0.17648 | 0.0 | 6.36 307s Comm | 0.022298 | 0.022298 | 0.022298 | 0.0 | 0.80 307s Output | 0.00067839 | 0.00067839 | 0.00067839 | 0.0 | 0.02 307s Modify | 0.31366 | 0.31366 | 0.31366 | 0.0 | 11.30 307s Other | | 0.07296 | | | 2.63 307s 307s Nlocal: 1724 ave 1724 max 1724 min 307s Histogram: 1 0 0 0 0 0 0 0 0 0 307s Nghost: 144 ave 144 max 144 min 307s Histogram: 1 0 0 0 0 0 0 0 0 0 307s Neighs: 14364 ave 14364 max 14364 min 307s Histogram: 1 0 0 0 0 0 0 0 0 0 307s 307s Total # of neighbors = 14364 307s Ave neighs/atom = 8.3317865 307s Neighbor list builds = 714 307s Dangerous builds = 0 307s Total wall time: 0:00:02 307s run: OK 308s autopkgtest [01:47:22]: test friction: -----------------------] 308s autopkgtest [01:47:22]: test friction: - - - - - - - - - - results - - - - - - - - - - 308s friction PASS 311s autopkgtest [01:47:25]: test hugo: preparing testbed 311s Reading package lists... 311s Building dependency tree... 311s Reading state information... 312s Starting pkgProblemResolver with broken count: 0 312s Starting 2 pkgProblemResolver with broken count: 0 312s Done 312s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 313s autopkgtest [01:47:27]: test hugo: [----------------------- 313s LAMMPS (7 Feb 2024 - Update 1) 313s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 313s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 313s using 1 OpenMP thread(s) per MPI task 313s Lattice spacing in x,y,z = 1.4142135 2 2 313s Created orthogonal box = (0 0 0) to (7.0710677 9.9999999 9.9999999) 313s 1 by 1 by 2 MPI processor grid 313s Created 1000 atoms 313s using lattice units in orthogonal box = (0 0 0) to (7.0710677 9.9999999 9.9999999) 313s create_atoms CPU = 0.000 seconds 313s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 313s Neighbor list info ... 313s update: every = 1 steps, delay = 0 steps, check = yes 313s max neighbors/atom: 2000, page size: 100000 313s master list distance cutoff = 1.8475372 313s ghost atom cutoff = 1.8475372 313s binsize = 0.92376862, bins = 8 11 11 313s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 313s (1) pair lj/cubic, perpetual 313s attributes: half, newton on 313s pair build: half/bin/atomonly/newton 313s stencil: half/bin/3d 313s bin: standard 313s Setting up cg style minimization ... 313s Unit style : lj 313s Current step : 0 313s WARNING: Energy due to 3 extra global DOFs will be included in minimizer energies 313s (src/min.cpp:219) 313s Per MPI rank memory allocation (min/avg/max) = 4.237 | 4.237 | 4.237 Mbytes 313s Step Temp PotEng TotEng Pxx Pyy Pzz Lx Ly Lz 313s 0 0 -6.2937536 -6.2937536 -2.7722424 -2.7722424 -2.7722424 7.0710677 9.9999999 9.9999999 313s 100 0 -6.3319014 -6.3319014 -0.75971257 -0.75971257 -0.75971257 7.0003571 9.8999999 9.8999999 314s 134 0 -6.3344253 -6.3344253 -4.3497387e-13 -4.7220431e-13 -4.7089748e-13 6.9780267 9.8684199 9.8684199 314s Loop time of 0.0284471 on 2 procs for 134 steps with 1000 atoms 314s 314s 99.4% CPU use with 2 MPI tasks x 1 OpenMP threads 314s 314s Minimization stats: 314s Stopping criterion = force tolerance 314s Energy initial, next-to-last, final = 314s -6.29375358358574 -6.33442531515467 -6.33442531515467 314s Force two-norm initial, final = 3395.2895 5.5900884e-10 314s Force max component initial, final = 1960.2713 3.2516979e-10 314s Final line search alpha, max atom move = 1 3.2516979e-10 314s Iterations, force evaluations = 134 137 314s 314s MPI task timing breakdown: 314s Section | min time | avg time | max time |%varavg| %total 314s --------------------------------------------------------------- 314s Pair | 0.014093 | 0.016609 | 0.019124 | 2.0 | 58.38 314s Neigh | 0.00032072 | 0.00036292 | 0.00040512 | 0.0 | 1.28 314s Comm | 0.0037141 | 0.0062496 | 0.0087852 | 3.2 | 21.97 314s Output | 2.3605e-05 | 4.7665e-05 | 7.1725e-05 | 0.0 | 0.17 314s Modify | 0 | 0 | 0 | 0.0 | 0.00 314s Other | | 0.005178 | | | 18.20 314s 314s Nlocal: 500 ave 550 max 450 min 314s Histogram: 1 0 0 0 0 0 0 0 0 1 314s Nghost: 1214 ave 1264 max 1164 min 314s Histogram: 1 0 0 0 0 0 0 0 0 1 314s Neighs: 10500 ave 11550 max 9450 min 314s Histogram: 1 0 0 0 0 0 0 0 0 1 314s 314s Total # of neighbors = 21000 314s Ave neighs/atom = 21 314s Neighbor list builds = 1 314s Dangerous builds = 0 314s System init for write_restart ... 314s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 314s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 314s using 1 OpenMP thread(s) per MPI task 314s Reading restart file ... 314s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 314s restoring atom style atomic from restart 314s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 314s 1 by 1 by 2 MPI processor grid 314s restoring pair style lj/cubic from restart 314s 1000 atoms 314s read_restart CPU = 0.001 seconds 314s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 314s Neighbor list info ... 314s update: every = 1 steps, delay = 0 steps, check = yes 314s max neighbors/atom: 2000, page size: 100000 314s master list distance cutoff = 1.7475372 314s ghost atom cutoff = 1.7475372 314s binsize = 0.87376862, bins = 8 12 12 314s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 314s (1) pair lj/cubic, perpetual 314s attributes: half, newton on 314s pair build: half/bin/atomonly/newton 314s stencil: half/bin/3d 314s bin: standard 314s Setting up Verlet run ... 314s Unit style : lj 314s Current step : 0 314s Time step : 0.001 314s Per MPI rank memory allocation (min/avg/max) = 3.112 | 3.112 | 3.112 Mbytes 314s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 314s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014355674 -0.00025875943 9.8684199 0 -0.004855272 2.3793218 0.0041072261 314s 1000 0.010142951 0.015199212 -2.1715786 -4183.8734 129.07448 58.487036 8.3141728 -4.1817171 0.93612119 23.511325 3.7371582 314s 2000 0.37217696 0.55770718 -5.501671 -1113.5078 12.361734 0.56717221 9.4220234 -1.1085639 -0.39798945 13.397419 0.62811105 314s 3000 0.52025677 0.77960476 -3.8549126 -3288.4446 57.946721 16.7702 8.5666574 -3.2853693 -0.20934692 17.195254 2.2940268 315s 4000 0.52000674 0.77923009 -4.0042813 -3180.1686 42.281055 5.2538452 8.5173574 -3.1769436 -0.37279124 14.42108 1.9958424 315s 5000 0.26632329 0.39908545 -5.1559109 -1725.4657 25.17764 3.3288258 8.8480337 -1.7207089 -0.22616494 12.779441 1.3411624 315s 6000 0.14673418 0.21988117 -3.7657368 -1845.8673 60.573444 14.615699 8.242708 -1.8423215 0.21289355 15.752155 2.6177037 315s 7000 0.085950705 0.12879713 -5.1644144 -1924.7174 30.48448 5.8732723 8.6787408 -1.9196818 -0.010600412 13.03827 1.5916113 316s 8000 0.040267888 0.060341431 -4.7547111 -1486.1603 41.506923 9.5593428 8.4878924 -1.4814659 0.11935469 14.137029 1.9986677 316s 9000 0.025458786 0.038149991 -4.5523455 -1642.5001 44.838555 9.9866475 8.4152155 -1.6379859 0.15016793 14.325688 2.1306608 316s 10000 0.013645992 0.020448519 -5.2852664 -2425.1699 28.141793 5.1524388 8.6994187 -2.419905 0.02671273 12.635999 1.516074 316s Loop time of 2.78715 on 2 procs for 10000 steps with 1000 atoms 316s 316s Performance: 309994.564 tau/day, 3587.900 timesteps/s, 3.588 Matom-step/s 316s 93.9% CPU use with 2 MPI tasks x 1 OpenMP threads 316s 316s MPI task timing breakdown: 316s Section | min time | avg time | max time |%varavg| %total 316s --------------------------------------------------------------- 316s Pair | 1.6692 | 1.7343 | 1.7994 | 4.9 | 62.22 316s Neigh | 0.093098 | 0.093866 | 0.094633 | 0.3 | 3.37 316s Comm | 0.46547 | 0.53072 | 0.59598 | 9.0 | 19.04 316s Output | 0.00055494 | 0.0014977 | 0.0024405 | 2.4 | 0.05 316s Modify | 0.3599 | 0.36265 | 0.36541 | 0.5 | 13.01 316s Other | | 0.06411 | | | 2.30 316s 316s Nlocal: 500 ave 510 max 490 min 316s Histogram: 1 0 0 0 0 0 0 0 0 1 316s Nghost: 1351.5 ave 1357 max 1346 min 316s Histogram: 1 0 0 0 0 0 0 0 0 1 316s Neighs: 10160.5 ave 10780 max 9541 min 316s Histogram: 1 0 0 0 0 0 0 0 0 1 316s 316s Total # of neighbors = 20321 316s Ave neighs/atom = 20.321 316s Neighbor list builds = 194 316s Dangerous builds = 0 316s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 316s using 1 OpenMP thread(s) per MPI task 316s Reading restart file ... 316s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 316s restoring atom style atomic from restart 316s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 316s 1 by 1 by 2 MPI processor grid 316s restoring pair style lj/cubic from restart 316s 1000 atoms 316s read_restart CPU = 0.001 seconds 316s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 316s Neighbor list info ... 316s update: every = 1 steps, delay = 0 steps, check = yes 316s max neighbors/atom: 2000, page size: 100000 316s master list distance cutoff = 1.7475372 316s ghost atom cutoff = 1.7475372 316s binsize = 0.87376862, bins = 8 12 12 316s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 316s (1) pair lj/cubic, perpetual 316s attributes: half, newton on 316s pair build: half/bin/atomonly/newton 316s stencil: half/bin/3d 316s bin: standard 316s Setting up Verlet run ... 316s Unit style : lj 316s Current step : 0 316s Time step : 0.001 316s Per MPI rank memory allocation (min/avg/max) = 3.112 | 3.112 | 3.112 Mbytes 316s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 316s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014355674 -0.00025875943 9.8684199 0 -0.004855272 2.3793218 0.0041072261 317s 1000 0.0062486434 0.0093635921 -5.9891167 -1670.9585 18.915821 7.5825014 9.233799 -1.6649788 0.023420172 13.975961 0.92134379 317s 2000 0.0067916638 0.010177308 -5.4565133 -2537.9542 37.064222 15.536207 8.949588 -2.5325079 0.10233218 16.324942 1.5455443 317s 3000 0.0073287622 0.01098215 -5.3664364 -2643.9475 39.90842 16.808813 8.915463 -2.638592 0.11823484 16.639094 1.6327251 317s 4000 0.0070205928 0.010520358 -5.3625886 -2655.7942 40.007504 16.850221 8.9144166 -2.6504422 0.11869019 16.650758 1.6356322 318s 5000 0.007504613 0.011245663 -5.3630526 -2664.53 39.995767 16.844528 8.9145098 -2.6591782 0.11842922 16.649115 1.6353137 318s 6000 0.0076250338 0.011426113 -5.3627977 -2673.3599 39.995632 16.842795 8.9145438 -2.6680085 0.11826685 16.649378 1.6352823 318s 7000 0.0075689977 0.011342143 -5.3621825 -2682.2145 40.003065 16.845001 8.9145477 -2.6768636 0.11817069 16.650959 1.6354309 319s 8000 0.0078519894 0.011766206 -5.3620929 -2691.0711 39.995512 16.838121 8.9145618 -2.6857208 0.11790857 16.649508 1.6352647 319s 9000 0.0084026053 0.012591304 -5.3624375 -2700.1249 40.00216 16.845103 8.9145931 -2.694775 0.11780799 16.65116 1.6353742 319s 10000 0.0087571135 0.013122535 -5.3624901 -2708.9831 39.996386 16.840912 8.9146292 -2.7036337 0.11756735 16.650267 1.6352259 319s Loop time of 2.53514 on 2 procs for 10000 steps with 1000 atoms 319s 319s Performance: 340810.192 tau/day, 3944.562 timesteps/s, 3.945 Matom-step/s 319s 92.8% CPU use with 2 MPI tasks x 1 OpenMP threads 319s 319s MPI task timing breakdown: 319s Section | min time | avg time | max time |%varavg| %total 319s --------------------------------------------------------------- 319s Pair | 1.3297 | 1.4038 | 1.4779 | 6.3 | 55.37 319s Neigh | 0.004986 | 0.0052807 | 0.0055754 | 0.4 | 0.21 319s Comm | 0.58291 | 0.65694 | 0.73097 | 9.1 | 25.91 319s Output | 0.00056343 | 0.0018116 | 0.0030599 | 2.9 | 0.07 319s Modify | 0.37247 | 0.37948 | 0.38649 | 1.1 | 14.97 319s Other | | 0.08781 | | | 3.46 319s 319s Nlocal: 500 ave 503 max 497 min 319s Histogram: 1 0 0 0 0 0 0 0 0 1 319s Nghost: 1214 ave 1217 max 1211 min 319s Histogram: 1 0 0 0 0 0 0 0 0 1 319s Neighs: 10500 ave 10560 max 10440 min 319s Histogram: 1 0 0 0 0 0 0 0 0 1 319s 319s Total # of neighbors = 21000 319s Ave neighs/atom = 21 319s Neighbor list builds = 10 319s Dangerous builds = 0 319s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 319s using 1 OpenMP thread(s) per MPI task 319s Reading restart file ... 319s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 319s restoring atom style atomic from restart 319s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 319s 1 by 1 by 2 MPI processor grid 319s restoring pair style lj/cubic from restart 319s 1000 atoms 319s read_restart CPU = 0.000 seconds 319s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 319s Neighbor list info ... 319s update: every = 1 steps, delay = 0 steps, check = yes 319s max neighbors/atom: 2000, page size: 100000 319s master list distance cutoff = 1.7475372 319s ghost atom cutoff = 1.7475372 319s binsize = 0.87376862, bins = 8 12 12 319s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 319s (1) pair lj/cubic, perpetual 319s attributes: half, newton on 319s pair build: half/bin/atomonly/newton 319s stencil: half/bin/3d 319s bin: standard 319s Setting up Verlet run ... 319s Unit style : lj 319s Current step : 0 319s Time step : 0.001 319s Per MPI rank memory allocation (min/avg/max) = 3.112 | 3.112 | 3.112 Mbytes 319s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 319s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014355674 -0.00025875943 9.8684199 0 -0.004855272 2.3793218 0.0041072261 319s 1000 0.0081680995 0.012239897 -5.502183 -838.86998 35.611847 14.887133 8.9677725 -0.83338004 0.093826643 16.159657 1.5001702 319s 2000 0.019411571 0.02908824 -5.2936173 -1019.8648 41.786268 17.574468 8.8958707 -1.0146003 0.11822851 16.856679 1.6874844 320s 3000 0.047493358 0.071168797 -5.3442104 -973.41424 39.063178 16.131155 8.932271 -0.9681412 0.073773934 16.606449 1.6012863 320s 4000 0.11967749 0.17933672 -5.2091216 -1305.4423 40.847348 16.439268 8.9207902 -1.3004125 0.017533293 16.880106 1.647278 320s 5000 0.1321076 0.19796323 -5.2602273 -1221.8186 39.035827 15.56534 8.9413169 -1.2167564 -0.00091184948 16.679969 1.5931121 321s 6000 0.14696328 0.22022448 -5.1837201 -1395.6748 40.850308 16.268271 8.9221523 -1.3907113 -0.0051917075 16.892648 1.6461742 321s 7000 0.12077248 0.18097755 -5.2583118 -1181.0031 39.190631 15.648852 8.9380865 -1.1759258 0.0072501862 16.684492 1.5989963 321s 8000 0.14329465 0.21472703 -5.1714516 -1352.4587 40.863939 16.196848 8.9218327 -1.347502 -0.0071500832 16.892664 1.646722 321s 9000 0.12213842 0.18302442 -5.259117 -1191.6806 39.213345 15.658699 8.9368295 -1.1866045 0.0076494093 16.678266 1.6005204 322s 10000 0.1480674 0.221879 -5.1796888 -1362.5622 40.676046 16.107317 8.9229551 -1.3576044 -0.0093926147 16.863607 1.6419747 322s Loop time of 2.89491 on 2 procs for 10000 steps with 1000 atoms 322s 322s Performance: 298454.470 tau/day, 3454.334 timesteps/s, 3.454 Matom-step/s 322s 92.6% CPU use with 2 MPI tasks x 1 OpenMP threads 322s 322s MPI task timing breakdown: 322s Section | min time | avg time | max time |%varavg| %total 322s --------------------------------------------------------------- 322s Pair | 1.5089 | 1.6557 | 1.8026 | 11.4 | 57.19 322s Neigh | 0.045408 | 0.046809 | 0.048211 | 0.6 | 1.62 322s Comm | 0.51269 | 0.66714 | 0.8216 | 18.9 | 23.05 322s Output | 0.00079262 | 0.0020437 | 0.0032948 | 2.8 | 0.07 322s Modify | 0.42289 | 0.42834 | 0.43379 | 0.8 | 14.80 322s Other | | 0.09487 | | | 3.28 322s 322s Nlocal: 500 ave 503 max 497 min 322s Histogram: 1 0 0 0 0 0 0 0 0 1 322s Nghost: 1217.5 ave 1219 max 1216 min 322s Histogram: 1 0 0 0 0 0 0 0 0 1 322s Neighs: 10291 ave 10353 max 10229 min 322s Histogram: 1 0 0 0 0 0 0 0 0 1 322s 322s Total # of neighbors = 20582 322s Ave neighs/atom = 20.582 322s Neighbor list builds = 89 322s Dangerous builds = 0 322s Total wall time: 0:00:08 322s LAMMPS (7 Feb 2024 - Update 1) 322s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 322s using 1 OpenMP thread(s) per MPI task 322s Lattice spacing in x,y,z = 1.4142135 2 2 322s Created orthogonal box = (0 0 0) to (7.0710677 9.9999999 9.9999999) 322s 1 by 1 by 1 MPI processor grid 322s Created 1000 atoms 322s using lattice units in orthogonal box = (0 0 0) to (7.0710677 9.9999999 9.9999999) 322s create_atoms CPU = 0.001 seconds 322s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 322s Neighbor list info ... 322s update: every = 1 steps, delay = 0 steps, check = yes 322s max neighbors/atom: 2000, page size: 100000 322s master list distance cutoff = 1.8475372 322s ghost atom cutoff = 1.8475372 322s binsize = 0.92376862, bins = 8 11 11 322s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 322s (1) pair lj/cubic, perpetual 322s attributes: half, newton on 322s pair build: half/bin/atomonly/newton 322s stencil: half/bin/3d 322s bin: standard 322s Setting up cg style minimization ... 322s Unit style : lj 322s Current step : 0 322s WARNING: Energy due to 3 extra global DOFs will be included in minimizer energies 322s (src/min.cpp:219) 322s Per MPI rank memory allocation (min/avg/max) = 4.247 | 4.247 | 4.247 Mbytes 322s Step Temp PotEng TotEng Pxx Pyy Pzz Lx Ly Lz 322s 0 0 -6.2937536 -6.2937536 -2.7722424 -2.7722424 -2.7722424 7.0710677 9.9999999 9.9999999 322s 100 0 -6.3319014 -6.3319014 -0.75971257 -0.75971257 -0.75971257 7.0003571 9.8999999 9.8999999 322s 134 0 -6.3344253 -6.3344253 -4.3330648e-13 -4.7530261e-13 -4.7130069e-13 6.9780267 9.8684199 9.8684199 322s Loop time of 0.0592268 on 1 procs for 134 steps with 1000 atoms 322s 322s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads 322s 322s Minimization stats: 322s Stopping criterion = force tolerance 322s Energy initial, next-to-last, final = 322s -6.29375358358557 -6.33442531515503 -6.33442531515503 322s Force two-norm initial, final = 3395.2895 5.5740327e-10 322s Force max component initial, final = 1960.2713 3.2730334e-10 322s Final line search alpha, max atom move = 1 3.2730334e-10 322s Iterations, force evaluations = 134 137 322s 322s MPI task timing breakdown: 322s Section | min time | avg time | max time |%varavg| %total 322s --------------------------------------------------------------- 322s Pair | 0.048969 | 0.048969 | 0.048969 | 0.0 | 82.68 322s Neigh | 0.00090627 | 0.00090627 | 0.00090627 | 0.0 | 1.53 322s Comm | 0.001279 | 0.001279 | 0.001279 | 0.0 | 2.16 322s Output | 2.6279e-05 | 2.6279e-05 | 2.6279e-05 | 0.0 | 0.04 322s Modify | 0 | 0 | 0 | 0.0 | 0.00 322s Other | | 0.008046 | | | 13.58 322s 322s Nlocal: 1000 ave 1000 max 1000 min 322s Histogram: 1 0 0 0 0 0 0 0 0 0 322s Nghost: 1724 ave 1724 max 1724 min 322s Histogram: 1 0 0 0 0 0 0 0 0 0 322s Neighs: 21000 ave 21000 max 21000 min 322s Histogram: 1 0 0 0 0 0 0 0 0 0 322s 322s Total # of neighbors = 21000 322s Ave neighs/atom = 21 322s Neighbor list builds = 1 322s Dangerous builds = 0 322s System init for write_restart ... 322s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 322s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 322s using 1 OpenMP thread(s) per MPI task 322s Reading restart file ... 322s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 322s restoring atom style atomic from restart 322s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 322s 1 by 1 by 1 MPI processor grid 322s restoring pair style lj/cubic from restart 322s 1000 atoms 322s read_restart CPU = 0.001 seconds 322s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 322s Neighbor list info ... 322s update: every = 1 steps, delay = 0 steps, check = yes 322s max neighbors/atom: 2000, page size: 100000 322s master list distance cutoff = 1.7475372 322s ghost atom cutoff = 1.7475372 322s binsize = 0.87376862, bins = 8 12 12 322s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 327s (1) pair lj/cubic, perpetual 327s attributes: half, newton on 327s pair build: half/bin/atomonly/newton 327s stencil: half/bin/3d 327s bin: standard 327s Setting up Verlet run ... 327s Unit style : lj 327s Current step : 0 327s Time step : 0.001 327s Per MPI rank memory allocation (min/avg/max) = 3.124 | 3.124 | 3.124 Mbytes 327s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 327s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014381062 -0.00023971829 9.8684199 0 -0.004855267 2.3814248 0.0041108563 327s 1000 0.0093381492 0.013993217 -2.1704431 -4183.8284 129.15284 58.544409 8.3142517 -4.1816719 0.93744212 23.519052 3.7381985 327s 2000 0.24794859 0.37155095 -5.8915826 -528.38691 8.3849811 1.3744297 9.5938806 -0.52286688 -0.24350394 13.910493 0.41033425 327s 3000 0.3892042 0.5832225 -3.7686896 -3442.3257 72.742382 28.486576 8.6238082 -3.4391402 0.0038227739 19.697354 2.5139569 327s 4000 0.67010303 1.0041494 -4.2080956 -2935.8105 35.596234 3.9346859 8.7508489 -2.9326065 -0.58038927 14.529876 1.6677093 327s 5000 0.41845028 0.62704774 -4.8392822 -1894.6664 30.624319 4.6370699 8.7827304 -1.8904542 -0.31998377 13.670423 1.5249748 327s 6000 0.22409652 0.33580864 -3.7653422 -2666.4156 50.804071 7.220865 8.25496 -2.6629861 -0.017448126 14.48017 2.3883779 327s 7000 0.094832866 0.14210705 -4.5432169 -2337.0271 35.853414 3.4750842 8.4475655 -2.332626 -0.052659776 12.95347 1.8841809 327s 8000 0.043338745 0.06494311 -4.6249403 -1687.4892 39.679004 6.7256868 8.4321684 -1.6829292 0.070571417 13.554654 1.9927395 327s 9000 0.018233343 0.027322664 -4.425909 -1916.4941 41.680023 5.9079935 8.3470382 -1.9120955 0.090887676 13.502397 2.1013348 327s 10000 0.0082616415 0.01238007 -4.6221264 -1723.6542 39.842157 6.5678795 8.41093 -1.7190444 0.099616538 13.484322 2.0113699 327s Loop time of 4.76112 on 1 procs for 10000 steps with 1000 atoms 327s 327s Performance: 181469.915 tau/day, 2100.346 timesteps/s, 2.100 Matom-step/s 327s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads 327s 327s MPI task timing breakdown: 327s Section | min time | avg time | max time |%varavg| %total 327s --------------------------------------------------------------- 327s Pair | 3.9618 | 3.9618 | 3.9618 | 0.0 | 83.21 327s Neigh | 0.18112 | 0.18112 | 0.18112 | 0.0 | 3.80 327s Comm | 0.085251 | 0.085251 | 0.085251 | 0.0 | 1.79 327s Output | 0.00046325 | 0.00046325 | 0.00046325 | 0.0 | 0.01 327s Modify | 0.49455 | 0.49455 | 0.49455 | 0.0 | 10.39 327s Other | | 0.03797 | | | 0.80 327s 327s Nlocal: 1000 ave 1000 max 1000 min 327s Histogram: 1 0 0 0 0 0 0 0 0 0 327s Nghost: 1886 ave 1886 max 1886 min 327s Histogram: 1 0 0 0 0 0 0 0 0 0 327s Neighs: 20874 ave 20874 max 20874 min 327s Histogram: 1 0 0 0 0 0 0 0 0 0 327s 327s Total # of neighbors = 20874 327s Ave neighs/atom = 20.874 327s Neighbor list builds = 188 327s Dangerous builds = 0 327s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 327s using 1 OpenMP thread(s) per MPI task 327s Reading restart file ... 327s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 327s restoring atom style atomic from restart 327s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 327s 1 by 1 by 1 MPI processor grid 327s restoring pair style lj/cubic from restart 327s 1000 atoms 327s read_restart CPU = 0.000 seconds 327s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 327s Neighbor list info ... 331s update: every = 1 steps, delay = 0 steps, check = yes 331s max neighbors/atom: 2000, page size: 100000 331s master list distance cutoff = 1.7475372 331s ghost atom cutoff = 1.7475372 331s binsize = 0.87376862, bins = 8 12 12 331s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 331s (1) pair lj/cubic, perpetual 331s attributes: half, newton on 331s pair build: half/bin/atomonly/newton 331s stencil: half/bin/3d 331s bin: standard 331s Setting up Verlet run ... 331s Unit style : lj 331s Current step : 0 331s Time step : 0.001 331s Per MPI rank memory allocation (min/avg/max) = 3.124 | 3.124 | 3.124 Mbytes 331s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 331s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014381062 -0.00023971829 9.8684199 0 -0.004855267 2.3814248 0.0041108563 331s 1000 0.0062572988 0.0093765623 -5.989087 -1670.9191 18.918118 7.5844401 9.2338165 -1.6649394 0.023419337 13.976997 0.92138738 331s 2000 0.0068451081 0.010257394 -5.456581 -2537.81 37.064253 15.537266 8.9496405 -2.5323637 0.10230605 16.325406 1.5455016 331s 3000 0.0073276099 0.010980423 -5.3663421 -2643.8751 39.907292 16.807489 8.9154852 -2.6385198 0.11818116 16.63905 1.6326832 331s 4000 0.0069296906 0.010384141 -5.36234 -2655.7228 40.010742 16.851482 8.9144328 -2.6503709 0.11868137 16.651571 1.6356847 331s 5000 0.0076142461 0.011409948 -5.3631443 -2664.4499 39.997648 16.846756 8.9145416 -2.6590982 0.1184114 16.649779 1.6353254 331s 6000 0.0077053831 0.011546517 -5.3628538 -2673.2444 39.991598 16.840314 8.9145803 -2.667893 0.11818361 16.648852 1.6351691 331s 7000 0.0077405663 0.011599239 -5.3623531 -2682.1589 40.000448 16.844009 8.9145774 -2.6768081 0.11809899 16.650669 1.6353525 331s 8000 0.0080673569 0.012088934 -5.3623755 -2691.0104 39.995327 16.840134 8.9146099 -2.6856601 0.11787103 16.649882 1.6352204 331s 9000 0.0083223083 0.012470979 -5.3622988 -2699.8929 40.00571 16.847764 8.9146503 -2.6945431 0.11781523 16.652389 1.6353987 331s 10000 0.0091249116 0.01367368 -5.3630138 -2708.966 39.987197 16.837314 8.9146848 -2.7036167 0.11743014 16.648832 1.6349911 331s Loop time of 3.80595 on 1 procs for 10000 steps with 1000 atoms 331s 331s Performance: 227013.172 tau/day, 2627.467 timesteps/s, 2.627 Matom-step/s 331s 99.4% CPU use with 1 MPI tasks x 1 OpenMP threads 331s 331s MPI task timing breakdown: 331s Section | min time | avg time | max time |%varavg| %total 331s --------------------------------------------------------------- 331s Pair | 3.2389 | 3.2389 | 3.2389 | 0.0 | 85.10 331s Neigh | 0.0094691 | 0.0094691 | 0.0094691 | 0.0 | 0.25 331s Comm | 0.070723 | 0.070723 | 0.070723 | 0.0 | 1.86 331s Output | 0.00044164 | 0.00044164 | 0.00044164 | 0.0 | 0.01 331s Modify | 0.4538 | 0.4538 | 0.4538 | 0.0 | 11.92 331s Other | | 0.03266 | | | 0.86 331s 331s Nlocal: 1000 ave 1000 max 1000 min 331s Histogram: 1 0 0 0 0 0 0 0 0 0 331s Nghost: 1724 ave 1724 max 1724 min 331s Histogram: 1 0 0 0 0 0 0 0 0 0 331s Neighs: 21000 ave 21000 max 21000 min 331s Histogram: 1 0 0 0 0 0 0 0 0 0 331s 331s Total # of neighbors = 21000 331s Ave neighs/atom = 21 331s Neighbor list builds = 11 331s Dangerous builds = 0 331s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 331s using 1 OpenMP thread(s) per MPI task 331s Reading restart file ... 331s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 331s restoring atom style atomic from restart 335s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 335s 1 by 1 by 1 MPI processor grid 335s restoring pair style lj/cubic from restart 335s 1000 atoms 335s read_restart CPU = 0.001 seconds 335s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 335s Neighbor list info ... 335s update: every = 1 steps, delay = 0 steps, check = yes 335s max neighbors/atom: 2000, page size: 100000 335s master list distance cutoff = 1.7475372 335s ghost atom cutoff = 1.7475372 335s binsize = 0.87376862, bins = 8 12 12 335s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 335s (1) pair lj/cubic, perpetual 335s attributes: half, newton on 335s pair build: half/bin/atomonly/newton 335s stencil: half/bin/3d 335s bin: standard 335s Setting up Verlet run ... 335s Unit style : lj 335s Current step : 0 335s Time step : 0.001 335s Per MPI rank memory allocation (min/avg/max) = 3.124 | 3.124 | 3.124 Mbytes 335s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 335s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014381062 -0.00023971829 9.8684199 0 -0.004855267 2.3814248 0.0041108563 335s 1000 0.0083300318 0.012482553 -5.5023183 -838.99233 35.610078 14.886668 8.9677982 -0.83350249 0.093761717 16.159482 1.500112 335s 2000 0.020386436 0.030549075 -5.294934 -1021.4347 41.760404 17.563313 8.8960328 -1.0161703 0.1178086 16.852842 1.6868239 335s 3000 0.049693082 0.074465084 -5.3469418 -982.1922 39.030412 16.123502 8.9325589 -0.97691972 0.073097533 16.601991 1.6003728 335s 4000 0.11859524 0.17771497 -5.207074 -1299.948 40.941639 16.507821 8.9213137 -1.2949186 0.018189971 16.904165 1.6487306 335s 5000 0.130146 0.19502378 -5.261025 -1208.3405 39.059595 15.609328 8.9431689 -1.2032745 -0.00023811036 16.701434 1.5920334 335s 6000 0.13812959 0.20698719 -5.1710048 -1334.1421 40.904888 16.242199 8.9222846 -1.329178 -0.0044756362 16.90509 1.6471606 335s 7000 0.12107441 0.18143001 -5.2602562 -1170.0585 39.060849 15.577606 8.9397535 -1.1649797 0.005587398 16.671517 1.5949415 335s 8000 0.14333426 0.21478639 -5.1717109 -1352.635 40.876285 16.205871 8.9218128 -1.3476781 -0.0069373292 16.895041 1.6469877 335s 9000 0.12159783 0.18221435 -5.2591928 -1186.8604 39.22852 15.6778 8.9376658 -1.1817834 0.0077335044 16.68885 1.6001243 335s 10000 0.15321647 0.22959488 -5.188176 -1391.2245 40.666599 16.146259 8.9228489 -1.3862659 -0.0091900905 16.860718 1.6418747 335s Loop time of 4.15787 on 1 procs for 10000 steps with 1000 atoms 335s 335s Performance: 207798.586 tau/day, 2405.076 timesteps/s, 2.405 Matom-step/s 335s 99.5% CPU use with 1 MPI tasks x 1 OpenMP threads 335s 335s MPI task timing breakdown: 335s Section | min time | avg time | max time |%varavg| %total 335s --------------------------------------------------------------- 335s Pair | 3.4841 | 3.4841 | 3.4841 | 0.0 | 83.79 335s Neigh | 0.087761 | 0.087761 | 0.087761 | 0.0 | 2.11 335s Comm | 0.073169 | 0.073169 | 0.073169 | 0.0 | 1.76 335s Output | 0.0005368 | 0.0005368 | 0.0005368 | 0.0 | 0.01 335s Modify | 0.47785 | 0.47785 | 0.47785 | 0.0 | 11.49 335s Other | | 0.03448 | | | 0.83 335s 335s Nlocal: 1000 ave 1000 max 1000 min 335s Histogram: 1 0 0 0 0 0 0 0 0 0 335s Nghost: 1724 ave 1724 max 1724 min 335s Histogram: 1 0 0 0 0 0 0 0 0 0 335s Neighs: 20654 ave 20654 max 20654 min 335s Histogram: 1 0 0 0 0 0 0 0 0 0 335s 335s Total # of neighbors = 20654 335s Ave neighs/atom = 20.654 335s Neighbor list builds = 94 335s Dangerous builds = 0 335s Total wall time: 0:00:12 335s run: OK 335s autopkgtest [01:47:49]: test hugo: -----------------------] 336s hugo PASS 336s autopkgtest [01:47:50]: test hugo: - - - - - - - - - - results - - - - - - - - - - 336s autopkgtest [01:47:50]: test command1: preparing testbed 385s autopkgtest [01:48:39]: testbed dpkg architecture: amd64 385s autopkgtest [01:48:39]: testbed apt version: 2.9.31ubuntu1 385s autopkgtest [01:48:39]: @@@@@@@@@@@@@@@@@@@@ test bed setup 385s autopkgtest [01:48:39]: testbed release detected to be: plucky 386s autopkgtest [01:48:40]: updating testbed package index (apt update) 387s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 387s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 387s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 387s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 387s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [365 kB] 387s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [41.4 kB] 387s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [17.7 kB] 387s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [66.6 kB] 388s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [84.0 kB] 388s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 c-n-f Metadata [1844 B] 388s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 c-n-f Metadata [116 B] 388s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [338 kB] 388s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [168 kB] 388s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 c-n-f Metadata [14.9 kB] 388s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [18.0 kB] 388s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [9324 B] 388s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 c-n-f Metadata [628 B] 388s Fetched 1252 kB in 2s (791 kB/s) 389s Reading package lists... 390s Reading package lists... 390s Building dependency tree... 390s Reading state information... 390s Calculating upgrade... 390s Calculating upgrade... 390s The following package was automatically installed and is no longer required: 390s libnl-genl-3-200 390s Use 'sudo apt autoremove' to remove it. 390s The following NEW packages will be installed: 390s bpftool libdebuginfod-common libdebuginfod1t64 linux-headers-6.14.0-10 390s linux-headers-6.14.0-10-generic linux-image-6.14.0-10-generic 390s linux-modules-6.14.0-10-generic linux-modules-extra-6.14.0-10-generic 390s linux-perf linux-tools-6.14.0-10 linux-tools-6.14.0-10-generic pnp.ids 390s The following packages will be upgraded: 390s apparmor apt apt-utils binutils binutils-common binutils-x86-64-linux-gnu 390s cloud-init cloud-init-base curl dosfstools exfatprogs fwupd gcc-15-base 390s gir1.2-girepository-2.0 gir1.2-glib-2.0 htop hwdata initramfs-tools 390s initramfs-tools-bin initramfs-tools-core libapparmor1 libapt-pkg7.0 390s libassuan9 libatomic1 libaudit-common libaudit1 libbinutils libbrotli1 390s libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libctf-nobfd0 libctf0 390s libcurl3t64-gnutls libcurl4t64 libestr0 libftdi1-2 libfwupd3 libgcc-s1 390s libgirepository-1.0-1 libglib2.0-0t64 libglib2.0-data libgpgme11t64 390s libgprofng0 libjemalloc2 liblz4-1 liblzma5 libmm-glib0 libncurses6 390s libncursesw6 libnewt0.52 libnl-3-200 libnl-genl-3-200 libnl-route-3-200 390s libnss-systemd libpam-systemd libparted2t64 libpci3 libpython3-stdlib 390s libpython3.13 libpython3.13-minimal libpython3.13-stdlib libseccomp2 390s libselinux1 libsemanage-common libsemanage2 libsframe1 libsqlite3-0 390s libstdc++6 libsystemd-shared libsystemd0 libtinfo6 libudev1 libxml2 390s linux-firmware linux-generic linux-headers-generic linux-headers-virtual 390s linux-image-generic linux-image-virtual linux-libc-dev linux-tools-common 390s linux-virtual locales media-types ncurses-base ncurses-bin ncurses-term 390s parted pci.ids pciutils pinentry-curses python-apt-common python3 390s python3-apt python3-bcrypt python3-cffi-backend python3-dbus python3-gi 390s python3-jinja2 python3-lazr.uri python3-markupsafe python3-minimal 390s python3-newt python3-rpds-py python3-systemd python3-yaml python3.13 390s python3.13-gdbm python3.13-minimal rsync rsyslog strace systemd 390s systemd-cryptsetup systemd-resolved systemd-sysv systemd-timesyncd 390s ubuntu-kernel-accessories ubuntu-minimal ubuntu-standard udev whiptail 390s xz-utils 391s 126 upgraded, 12 newly installed, 0 to remove and 0 not upgraded. 391s Need to get 829 MB of archives. 391s After this operation, 325 MB of additional disk space will be used. 391s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-bin amd64 6.5+20250216-2 [194 kB] 391s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-dev-bin amd64 2.41-1ubuntu1 [24.7 kB] 391s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6-dev amd64 2.41-1ubuntu1 [2182 kB] 392s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 locales all 2.41-1ubuntu1 [4246 kB] 393s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6 amd64 2.41-1ubuntu1 [3327 kB] 394s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libc-bin amd64 2.41-1ubuntu1 [701 kB] 394s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-libc-dev amd64 6.14.0-10.10 [1723 kB] 394s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libatomic1 amd64 15-20250222-0ubuntu1 [10.4 kB] 394s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-15-base amd64 15-20250222-0ubuntu1 [53.4 kB] 394s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-s1 amd64 15-20250222-0ubuntu1 [77.8 kB] 394s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++6 amd64 15-20250222-0ubuntu1 [798 kB] 394s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-base all 6.5+20250216-2 [25.9 kB] 394s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 ncurses-term all 6.5+20250216-2 [276 kB] 394s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 liblz4-1 amd64 1.10.0-4 [66.4 kB] 394s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma5 amd64 5.6.4-1 [157 kB] 394s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd0 amd64 257.3-1ubuntu3 [595 kB] 394s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libnss-systemd amd64 257.3-1ubuntu3 [199 kB] 394s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-sysv amd64 257.3-1ubuntu3 [11.9 kB] 394s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-resolved amd64 257.3-1ubuntu3 [345 kB] 395s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-systemd amd64 257.3-1ubuntu3 [302 kB] 395s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd-shared amd64 257.3-1ubuntu3 [2371 kB] 395s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd amd64 257.3-1ubuntu3 [3052 kB] 395s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-timesyncd amd64 257.3-1ubuntu3 [42.1 kB] 395s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-cryptsetup amd64 257.3-1ubuntu3 [124 kB] 395s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 udev amd64 257.3-1ubuntu3 [1404 kB] 395s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libudev1 amd64 257.3-1ubuntu3 [215 kB] 395s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit-common all 1:4.0.2-2ubuntu2 [6628 B] 395s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libcap-ng0 amd64 0.8.5-4build1 [15.6 kB] 395s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libaudit1 amd64 1:4.0.2-2ubuntu2 [54.0 kB] 395s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libseccomp2 amd64 2.5.5-1ubuntu6 [53.5 kB] 395s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 libselinux1 amd64 3.7-3ubuntu3 [87.3 kB] 395s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libapparmor1 amd64 4.1.0~beta5-0ubuntu8 [55.0 kB] 395s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libapt-pkg7.0 amd64 2.9.33 [1138 kB] 395s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 apt amd64 2.9.33 [1439 kB] 395s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 apt-utils amd64 2.9.33 [222 kB] 395s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-minimal amd64 3.13.2-2 [27.7 kB] 395s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 python3 amd64 3.13.2-2 [24.0 kB] 395s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13 amd64 3.13.2-2 [2341 kB] 395s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 media-types all 13.0.0 [29.9 kB] 395s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libncurses6 amd64 6.5+20250216-2 [126 kB] 395s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libncursesw6 amd64 6.5+20250216-2 [165 kB] 395s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libtinfo6 amd64 6.5+20250216-2 [119 kB] 395s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libsqlite3-0 amd64 3.46.1-2 [715 kB] 395s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.2-2 [735 kB] 395s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.2-2 [2365 kB] 395s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.2-2 [883 kB] 396s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.2-2 [2066 kB] 396s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.4 kB] 396s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 rsync amd64 3.4.1+ds1-3 [482 kB] 396s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod-common all 0.192-4 [15.4 kB] 396s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage-common all 3.7-2.1build1 [7268 B] 396s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libsemanage2 amd64 3.7-2.1build1 [106 kB] 396s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libassuan9 amd64 3.0.2-2 [43.1 kB] 396s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-girepository-2.0 amd64 1.83.4-1 [25.3 kB] 396s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 gir1.2-glib-2.0 amd64 2.84.0-1 [184 kB] 396s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-0t64 amd64 2.84.0-1 [1669 kB] 396s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libgirepository-1.0-1 amd64 1.83.4-1 [89.5 kB] 396s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libestr0 amd64 0.1.11-2 [8340 B] 396s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libglib2.0-data all 2.84.0-1 [53.0 kB] 396s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-newt amd64 0.52.24-4ubuntu2 [21.1 kB] 396s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libnewt0.52 amd64 0.52.24-4ubuntu2 [55.7 kB] 396s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2ubuntu5 [772 kB] 396s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 python-apt-common all 2.9.9build1 [21.3 kB] 396s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-apt amd64 2.9.9build1 [172 kB] 396s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-cffi-backend amd64 1.17.1-2build2 [96.6 kB] 396s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dbus amd64 1.3.2-5build5 [102 kB] 396s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-4build1 [252 kB] 396s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-yaml amd64 6.0.2-1build2 [144 kB] 396s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 rsyslog amd64 8.2412.0-2ubuntu2 [555 kB] 396s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 whiptail amd64 0.52.24-4ubuntu2 [19.1 kB] 396s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-minimal amd64 1.549 [11.5 kB] 396s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 apparmor amd64 4.1.0~beta5-0ubuntu8 [701 kB] 396s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 dosfstools amd64 4.2-1.2 [95.0 kB] 396s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-genl-3-200 amd64 3.7.0-1 [12.2 kB] 396s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-route-3-200 amd64 3.7.0-1 [191 kB] 396s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-3-200 amd64 3.7.0-1 [64.9 kB] 396s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 parted amd64 3.6-5 [53.9 kB] 396s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libparted2t64 amd64 3.6-5 [158 kB] 396s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 pci.ids all 0.0~2025.03.09-1 [285 kB] 396s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 pciutils amd64 1:3.13.0-2 [110 kB] 396s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 libpci3 amd64 1:3.13.0-2 [39.8 kB] 396s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 strace amd64 6.13+ds-1ubuntu1 [622 kB] 396s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 xz-utils amd64 5.6.4-1 [278 kB] 396s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-standard amd64 1.549 [11.5 kB] 396s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libgprofng0 amd64 2.44-3ubuntu1 [886 kB] 396s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf0 amd64 2.44-3ubuntu1 [96.5 kB] 396s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libctf-nobfd0 amd64 2.44-3ubuntu1 [98.9 kB] 396s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-x86-64-linux-gnu amd64 2.44-3ubuntu1 [1108 kB] 396s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 libbinutils amd64 2.44-3ubuntu1 [585 kB] 396s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils amd64 2.44-3ubuntu1 [208 kB] 396s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-common amd64 2.44-3ubuntu1 [215 kB] 396s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libsframe1 amd64 2.44-3ubuntu1 [14.8 kB] 396s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 hwdata all 0.393-3 [1562 B] 396s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 pnp.ids all 0.393-3 [29.5 kB] 396s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-common all 6.14.0-10.10 [295 kB] 396s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 bpftool amd64 7.6.0+6.14.0-10.10 [1147 kB] 396s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-markupsafe amd64 2.1.5-1build4 [13.4 kB] 396s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 396s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init-base all 25.1-0ubuntu3 [616 kB] 396s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libbrotli1 amd64 1.1.0-2build4 [365 kB] 396s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 curl amd64 8.12.1-3ubuntu1 [258 kB] 396s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4t64 amd64 8.12.1-3ubuntu1 [437 kB] 397s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 exfatprogs amd64 1.2.8-1 [76.3 kB] 397s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl3t64-gnutls amd64 8.12.1-3ubuntu1 [432 kB] 397s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 fwupd amd64 2.0.6-4 [5408 kB] 398s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 libfwupd3 amd64 2.0.6-4 [136 kB] 398s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 libmm-glib0 amd64 1.23.4-0ubuntu3 [251 kB] 398s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 htop amd64 3.4.0-2 [195 kB] 398s Get:109 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-firmware amd64 20250310.git9e1370d3-0ubuntu1 [571 MB] 414s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools all 0.146ubuntu1 [7920 B] 414s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-core all 0.146ubuntu1 [51.9 kB] 414s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 initramfs-tools-bin amd64 0.146ubuntu1 [26.2 kB] 414s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod1t64 amd64 0.192-4 [21.0 kB] 414s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 libftdi1-2 amd64 1.5-8build1 [30.2 kB] 414s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libgpgme11t64 amd64 1.24.2-1ubuntu2 [155 kB] 414s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libjemalloc2 amd64 5.3.0-3 [277 kB] 414s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-6.14.0-10-generic amd64 6.14.0-10.10 [41.2 MB] 415s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-6.14.0-10-generic amd64 6.14.0-10.10 [15.3 MB] 416s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-modules-extra-6.14.0-10-generic amd64 6.14.0-10.10 [120 MB] 418s Get:120 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-generic amd64 6.14.0-10.10 [1730 B] 418s Get:121 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-generic amd64 6.14.0-10.10 [11.1 kB] 418s Get:122 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-virtual amd64 6.14.0-10.10 [1722 B] 418s Get:123 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-image-virtual amd64 6.14.0-10.10 [11.1 kB] 418s Get:124 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-virtual amd64 6.14.0-10.10 [1642 B] 418s Get:125 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10 all 6.14.0-10.10 [14.2 MB] 418s Get:126 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-6.14.0-10-generic amd64 6.14.0-10.10 [3915 kB] 419s Get:127 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-headers-generic amd64 6.14.0-10.10 [11.0 kB] 419s Get:128 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-perf amd64 6.14.0-10.10 [4122 kB] 419s Get:129 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10 amd64 6.14.0-10.10 [1394 kB] 419s Get:130 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-tools-6.14.0-10-generic amd64 6.14.0-10.10 [830 B] 419s Get:131 http://ftpmaster.internal/ubuntu plucky/main amd64 pinentry-curses amd64 1.3.1-2ubuntu3 [42.3 kB] 419s Get:132 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lazr.uri all 1.0.6-6 [13.7 kB] 419s Get:133 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-rpds-py amd64 0.21.0-2ubuntu2 [278 kB] 419s Get:134 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-systemd amd64 235-1build6 [43.9 kB] 419s Get:135 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-gdbm amd64 3.13.2-2 [31.9 kB] 419s Get:136 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-kernel-accessories amd64 1.549 [11.2 kB] 419s Get:137 http://ftpmaster.internal/ubuntu plucky/main amd64 cloud-init all 25.1-0ubuntu3 [2100 B] 419s Get:138 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-bcrypt amd64 4.2.0-2.1build1 [221 kB] 419s Preconfiguring packages ... 419s Fetched 829 MB in 28s (29.3 MB/s) 420s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109140 files and directories currently installed.) 420s Preparing to unpack .../ncurses-bin_6.5+20250216-2_amd64.deb ... 420s Unpacking ncurses-bin (6.5+20250216-2) over (6.5+20250216-1) ... 420s Setting up ncurses-bin (6.5+20250216-2) ... 420s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109140 files and directories currently installed.) 420s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu1_amd64.deb ... 420s Unpacking libc-dev-bin (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 420s Preparing to unpack .../libc6-dev_2.41-1ubuntu1_amd64.deb ... 420s Unpacking libc6-dev:amd64 (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 420s Preparing to unpack .../locales_2.41-1ubuntu1_all.deb ... 420s Unpacking locales (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 420s Preparing to unpack .../libc6_2.41-1ubuntu1_amd64.deb ... 420s Checking for services that may need to be restarted... 420s Checking init scripts... 420s Checking for services that may need to be restarted... 420s Checking init scripts... 420s Stopping some services possibly affected by the upgrade (will be restarted later): 420s cron: stopping...done. 420s 420s Unpacking libc6:amd64 (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 421s Setting up libc6:amd64 (2.41-1ubuntu1) ... 421s Checking for services that may need to be restarted... 421s Checking init scripts... 421s Restarting services possibly affected by the upgrade: 421s cron: restarting...done. 421s 421s Services restarted successfully. 421s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109141 files and directories currently installed.) 421s Preparing to unpack .../libc-bin_2.41-1ubuntu1_amd64.deb ... 421s Unpacking libc-bin (2.41-1ubuntu1) over (2.40-4ubuntu1) ... 421s Setting up libc-bin (2.41-1ubuntu1) ... 421s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 422s Preparing to unpack .../libgcc-s1_15-20250222-0ubuntu1_amd64.deb ... 422s Unpacking libgcc-s1:amd64 (15-20250222-0ubuntu1) over (15-20250213-1ubuntu1) ... 422s Setting up libgcc-s1:amd64 (15-20250222-0ubuntu1) ... 422s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 422s Preparing to unpack .../libstdc++6_15-20250222-0ubuntu1_amd64.deb ... 422s Unpacking libstdc++6:amd64 (15-20250222-0ubuntu1) over (15-20250213-1ubuntu1) ... 422s Setting up libstdc++6:amd64 (15-20250222-0ubuntu1) ... 422s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 422s Preparing to unpack .../ncurses-base_6.5+20250216-2_all.deb ... 422s Unpacking ncurses-base (6.5+20250216-2) over (6.5+20250216-1) ... 422s Setting up ncurses-base (6.5+20250216-2) ... 422s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 422s Preparing to unpack .../ncurses-term_6.5+20250216-2_all.deb ... 422s Unpacking ncurses-term (6.5+20250216-2) over (6.5+20250216-1) ... 422s Preparing to unpack .../liblz4-1_1.10.0-4_amd64.deb ... 422s Unpacking liblz4-1:amd64 (1.10.0-4) over (1.10.0-3) ... 422s Setting up liblz4-1:amd64 (1.10.0-4) ... 422s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 422s Preparing to unpack .../liblzma5_5.6.4-1_amd64.deb ... 422s Unpacking liblzma5:amd64 (5.6.4-1) over (5.6.3-1) ... 422s Setting up liblzma5:amd64 (5.6.4-1) ... 423s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 423s Preparing to unpack .../libsystemd0_257.3-1ubuntu3_amd64.deb ... 423s Unpacking libsystemd0:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 423s Setting up libsystemd0:amd64 (257.3-1ubuntu3) ... 423s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 423s Preparing to unpack .../libnss-systemd_257.3-1ubuntu3_amd64.deb ... 423s Unpacking libnss-systemd:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 423s Preparing to unpack .../systemd-sysv_257.3-1ubuntu3_amd64.deb ... 423s Unpacking systemd-sysv (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 423s Preparing to unpack .../systemd-resolved_257.3-1ubuntu3_amd64.deb ... 423s Unpacking systemd-resolved (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 423s Preparing to unpack .../libpam-systemd_257.3-1ubuntu3_amd64.deb ... 423s Unpacking libpam-systemd:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 423s Preparing to unpack .../libsystemd-shared_257.3-1ubuntu3_amd64.deb ... 423s Unpacking libsystemd-shared:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 423s Setting up libsystemd-shared:amd64 (257.3-1ubuntu3) ... 423s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 423s Preparing to unpack .../systemd_257.3-1ubuntu3_amd64.deb ... 423s Unpacking systemd (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 423s Preparing to unpack .../systemd-timesyncd_257.3-1ubuntu3_amd64.deb ... 423s Unpacking systemd-timesyncd (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 423s Preparing to unpack .../systemd-cryptsetup_257.3-1ubuntu3_amd64.deb ... 423s Unpacking systemd-cryptsetup (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 423s Preparing to unpack .../udev_257.3-1ubuntu3_amd64.deb ... 423s Unpacking udev (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 423s Preparing to unpack .../libudev1_257.3-1ubuntu3_amd64.deb ... 423s Unpacking libudev1:amd64 (257.3-1ubuntu3) over (257.2-3ubuntu1) ... 424s Setting up libudev1:amd64 (257.3-1ubuntu3) ... 424s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 424s Preparing to unpack .../libaudit-common_1%3a4.0.2-2ubuntu2_all.deb ... 424s Unpacking libaudit-common (1:4.0.2-2ubuntu2) over (1:4.0.2-2ubuntu1) ... 424s Setting up libaudit-common (1:4.0.2-2ubuntu2) ... 424s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 424s Preparing to unpack .../libcap-ng0_0.8.5-4build1_amd64.deb ... 424s Unpacking libcap-ng0:amd64 (0.8.5-4build1) over (0.8.5-4) ... 424s Setting up libcap-ng0:amd64 (0.8.5-4build1) ... 424s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 424s Preparing to unpack .../libaudit1_1%3a4.0.2-2ubuntu2_amd64.deb ... 424s Unpacking libaudit1:amd64 (1:4.0.2-2ubuntu2) over (1:4.0.2-2ubuntu1) ... 424s Setting up libaudit1:amd64 (1:4.0.2-2ubuntu2) ... 424s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 424s Preparing to unpack .../libseccomp2_2.5.5-1ubuntu6_amd64.deb ... 424s Unpacking libseccomp2:amd64 (2.5.5-1ubuntu6) over (2.5.5-1ubuntu5) ... 424s Setting up libseccomp2:amd64 (2.5.5-1ubuntu6) ... 424s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 424s Preparing to unpack .../libselinux1_3.7-3ubuntu3_amd64.deb ... 424s Unpacking libselinux1:amd64 (3.7-3ubuntu3) over (3.7-3ubuntu2) ... 424s Setting up libselinux1:amd64 (3.7-3ubuntu3) ... 424s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 424s Preparing to unpack .../libapparmor1_4.1.0~beta5-0ubuntu8_amd64.deb ... 424s Unpacking libapparmor1:amd64 (4.1.0~beta5-0ubuntu8) over (4.1.0~beta5-0ubuntu5) ... 424s Preparing to unpack .../libapt-pkg7.0_2.9.33_amd64.deb ... 424s Unpacking libapt-pkg7.0:amd64 (2.9.33) over (2.9.31ubuntu1) ... 424s Setting up libapt-pkg7.0:amd64 (2.9.33) ... 424s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 424s Preparing to unpack .../archives/apt_2.9.33_amd64.deb ... 424s Unpacking apt (2.9.33) over (2.9.31ubuntu1) ... 424s Setting up apt (2.9.33) ... 425s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 109146 files and directories currently installed.) 425s Preparing to unpack .../apt-utils_2.9.33_amd64.deb ... 425s Unpacking apt-utils (2.9.33) over (2.9.31ubuntu1) ... 425s Preparing to unpack .../python3-minimal_3.13.2-2_amd64.deb ... 425s Unpacking python3-minimal (3.13.2-2) over (3.13.2-1) ... 425s Setting up python3-minimal (3.13.2-2) ... 425s (Reading database ... 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.../23-parted_3.6-5_amd64.deb ... 429s Unpacking parted (3.6-5) over (3.6-4build1) ... 429s Preparing to unpack .../24-libparted2t64_3.6-5_amd64.deb ... 429s Adding 'diversion of /lib/x86_64-linux-gnu/libparted.so.2 to /lib/x86_64-linux-gnu/libparted.so.2.usr-is-merged by libparted2t64' 429s Adding 'diversion of /lib/x86_64-linux-gnu/libparted.so.2.0.5 to /lib/x86_64-linux-gnu/libparted.so.2.0.5.usr-is-merged by libparted2t64' 429s Unpacking libparted2t64:amd64 (3.6-5) over (3.6-4build1) ... 429s Preparing to unpack .../25-pci.ids_0.0~2025.03.09-1_all.deb ... 429s Unpacking pci.ids (0.0~2025.03.09-1) over (0.0~2025.02.12-1) ... 429s Preparing to unpack .../26-pciutils_1%3a3.13.0-2_amd64.deb ... 429s Unpacking pciutils (1:3.13.0-2) over (1:3.13.0-1) ... 429s Preparing to unpack .../27-libpci3_1%3a3.13.0-2_amd64.deb ... 429s Unpacking libpci3:amd64 (1:3.13.0-2) over (1:3.13.0-1) ... 429s Preparing to unpack .../28-strace_6.13+ds-1ubuntu1_amd64.deb ... 429s Unpacking strace 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.../73-linux-headers-generic_6.14.0-10.10_amd64.deb ... 439s Unpacking linux-headers-generic (6.14.0-10.10) over (6.12.0-16.16+2) ... 439s Selecting previously unselected package linux-perf. 439s Preparing to unpack .../74-linux-perf_6.14.0-10.10_amd64.deb ... 439s Unpacking linux-perf (6.14.0-10.10) ... 439s Selecting previously unselected package linux-tools-6.14.0-10. 439s Preparing to unpack .../75-linux-tools-6.14.0-10_6.14.0-10.10_amd64.deb ... 439s Unpacking linux-tools-6.14.0-10 (6.14.0-10.10) ... 439s Selecting previously unselected package linux-tools-6.14.0-10-generic. 439s Preparing to unpack .../76-linux-tools-6.14.0-10-generic_6.14.0-10.10_amd64.deb ... 439s Unpacking linux-tools-6.14.0-10-generic (6.14.0-10.10) ... 439s Preparing to unpack .../77-pinentry-curses_1.3.1-2ubuntu3_amd64.deb ... 439s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 439s Preparing to unpack .../78-python3-lazr.uri_1.0.6-6_all.deb ... 439s Unpacking python3-lazr.uri (1.0.6-6) over (1.0.6-5) ... 439s Preparing to unpack .../79-python3-rpds-py_0.21.0-2ubuntu2_amd64.deb ... 439s Unpacking python3-rpds-py (0.21.0-2ubuntu2) over (0.21.0-2ubuntu1) ... 439s Preparing to unpack .../80-python3-systemd_235-1build6_amd64.deb ... 439s Unpacking python3-systemd (235-1build6) over (235-1build5) ... 439s Preparing to unpack .../81-python3.13-gdbm_3.13.2-2_amd64.deb ... 439s Unpacking python3.13-gdbm (3.13.2-2) over (3.13.2-1) ... 439s Preparing to unpack .../82-ubuntu-kernel-accessories_1.549_amd64.deb ... 439s Unpacking ubuntu-kernel-accessories (1.549) over (1.548) ... 439s Preparing to unpack .../83-cloud-init_25.1-0ubuntu3_all.deb ... 439s Unpacking cloud-init (25.1-0ubuntu3) over (25.1-0ubuntu2) ... 439s Preparing to unpack .../84-python3-bcrypt_4.2.0-2.1build1_amd64.deb ... 440s Unpacking python3-bcrypt (4.2.0-2.1build1) over (4.2.0-2.1) ... 440s Setting up linux-headers-6.14.0-10 (6.14.0-10.10) ... 440s Setting up media-types (13.0.0) ... 440s Installing new version of config file /etc/mime.types ... 440s Setting up linux-headers-6.14.0-10-generic (6.14.0-10.10) ... 440s Setting up ubuntu-kernel-accessories (1.549) ... 440s Setting up libapparmor1:amd64 (4.1.0~beta5-0ubuntu8) ... 440s Setting up pci.ids (0.0~2025.03.09-1) ... 440s Setting up libnewt0.52:amd64 (0.52.24-4ubuntu2) ... 440s Setting up apt-utils (2.9.33) ... 440s Setting up libdebuginfod-common (0.192-4) ... 440s Setting up exfatprogs (1.2.8-1) ... 440s Setting up linux-firmware (20250310.git9e1370d3-0ubuntu1) ... 440s Setting up bpftool (7.6.0+6.14.0-10.10) ... 440s Setting up libestr0:amd64 (0.1.11-2) ... 440s Setting up libbrotli1:amd64 (1.1.0-2build4) ... 440s Setting up libsqlite3-0:amd64 (3.46.1-2) ... 440s Setting up dosfstools (4.2-1.2) ... 440s Setting up rsyslog (8.2412.0-2ubuntu2) ... 440s info: The user `syslog' is already a member of `adm'. 441s Setting up binutils-common:amd64 (2.44-3ubuntu1) ... 441s Setting up libcurl3t64-gnutls:amd64 (8.12.1-3ubuntu1) ... 441s Setting up linux-libc-dev:amd64 (6.14.0-10.10) ... 441s Setting up libctf-nobfd0:amd64 (2.44-3ubuntu1) ... 441s Setting up systemd (257.3-1ubuntu3) ... 441s /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring. 441s Created symlink '/run/systemd/system/tmp.mount' → '/dev/null'. 441s /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring. 441s Setting up libparted2t64:amd64 (3.6-5) ... 441s Removing 'diversion of /lib/x86_64-linux-gnu/libparted.so.2 to /lib/x86_64-linux-gnu/libparted.so.2.usr-is-merged by libparted2t64' 441s Removing 'diversion of /lib/x86_64-linux-gnu/libparted.so.2.0.5 to /lib/x86_64-linux-gnu/libparted.so.2.0.5.usr-is-merged by libparted2t64' 441s Setting up linux-headers-generic (6.14.0-10.10) ... 441s Setting up libjemalloc2:amd64 (5.3.0-3) ... 441s Setting up locales (2.41-1ubuntu1) ... 441s Installing new version of config file /etc/locale.alias ... 442s Generating locales (this might take a while)... 443s en_US.UTF-8... done 443s Generation complete. 443s Setting up libsframe1:amd64 (2.44-3ubuntu1) ... 443s Setting up libpython3.13-minimal:amd64 (3.13.2-2) ... 443s Setting up apparmor (4.1.0~beta5-0ubuntu8) ... 443s Installing new version of config file /etc/apparmor.d/fusermount3 ... 443s Installing new version of config file /etc/apparmor.d/lsusb ... 443s Installing new version of config file /etc/apparmor.d/openvpn ... 444s Reloading AppArmor profiles 445s Setting up libftdi1-2:amd64 (1.5-8build1) ... 445s Setting up libglib2.0-data (2.84.0-1) ... 445s Setting up systemd-cryptsetup (257.3-1ubuntu3) ... 445s Setting up libncurses6:amd64 (6.5+20250216-2) ... 445s Setting up strace (6.13+ds-1ubuntu1) ... 445s Setting up xz-utils (5.6.4-1) ... 445s Setting up systemd-timesyncd (257.3-1ubuntu3) ... 446s systemd-time-wait-sync.service is a disabled or a static unit not running, not starting it. 446s Setting up libatomic1:amd64 (15-20250222-0ubuntu1) ... 446s Setting up udev (257.3-1ubuntu3) ... 446s Setting up linux-modules-6.14.0-10-generic (6.14.0-10.10) ... 448s Setting up libncursesw6:amd64 (6.5+20250216-2) ... 448s Setting up libpci3:amd64 (1:3.13.0-2) ... 448s Setting up whiptail (0.52.24-4ubuntu2) ... 448s Setting up python-apt-common (2.9.9build1) ... 448s Setting up pnp.ids (0.393-3) ... 448s Setting up libnl-3-200:amd64 (3.7.0-1) ... 448s Setting up python3.13-minimal (3.13.2-2) ... 449s Setting up libgpgme11t64:amd64 (1.24.2-1ubuntu2) ... 449s Setting up libbinutils:amd64 (2.44-3ubuntu1) ... 449s Setting up libc-dev-bin (2.41-1ubuntu1) ... 449s Setting up libpython3.13-stdlib:amd64 (3.13.2-2) ... 449s Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2ubuntu5) ... 449s Setting up rsync (3.4.1+ds1-3) ... 449s rsync.service is a disabled or a static unit not running, not starting it. 449s Setting up python3.13-gdbm (3.13.2-2) ... 449s Setting up libpython3-stdlib:amd64 (3.13.2-2) ... 449s Setting up systemd-resolved (257.3-1ubuntu3) ... 450s Setting up initramfs-tools-bin (0.146ubuntu1) ... 450s Setting up ncurses-term (6.5+20250216-2) ... 450s Setting up libctf0:amd64 (2.44-3ubuntu1) ... 450s Setting up libpython3.13:amd64 (3.13.2-2) ... 450s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 450s Setting up libdebuginfod1t64:amd64 (0.192-4) ... 450s Setting up systemd-sysv (257.3-1ubuntu3) ... 450s Setting up linux-headers-virtual (6.14.0-10.10) ... 450s Setting up libcurl4t64:amd64 (8.12.1-3ubuntu1) ... 450s Setting up python3.13 (3.13.2-2) ... 451s Setting up htop (3.4.0-2) ... 451s Setting up linux-image-6.14.0-10-generic (6.14.0-10.10) ... 452s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.12.0-16-generic 452s I: /boot/initrd.img.old is now a symlink to initrd.img-6.12.0-16-generic 452s I: /boot/vmlinuz is now a symlink to vmlinuz-6.14.0-10-generic 452s I: /boot/initrd.img is now a symlink to initrd.img-6.14.0-10-generic 452s Setting up parted (3.6-5) ... 452s Setting up libnss-systemd:amd64 (257.3-1ubuntu3) ... 452s Setting up python3 (3.13.2-2) ... 452s Setting up python3-newt:amd64 (0.52.24-4ubuntu2) ... 452s Setting up python3-markupsafe (2.1.5-1build4) ... 452s Setting up linux-modules-extra-6.14.0-10-generic (6.14.0-10.10) ... 454s Setting up libnl-route-3-200:amd64 (3.7.0-1) ... 454s Setting up hwdata (0.393-3) ... 454s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 454s Setting up libglib2.0-0t64:amd64 (2.84.0-1) ... 454s No schema files found: doing nothing. 454s Setting up libgprofng0:amd64 (2.44-3ubuntu1) ... 454s Setting up linux-perf (6.14.0-10.10) ... 454s Setting up gir1.2-glib-2.0:amd64 (2.84.0-1) ... 454s Setting up pciutils (1:3.13.0-2) ... 454s Setting up python3-rpds-py (0.21.0-2ubuntu2) ... 454s Setting up libmm-glib0:amd64 (1.23.4-0ubuntu3) ... 454s Setting up libnl-genl-3-200:amd64 (3.7.0-1) ... 454s Setting up libpam-systemd:amd64 (257.3-1ubuntu3) ... 455s Setting up libc6-dev:amd64 (2.41-1ubuntu1) ... 455s Setting up libgirepository-1.0-1:amd64 (1.83.4-1) ... 455s Setting up curl (8.12.1-3ubuntu1) ... 455s Setting up linux-image-virtual (6.14.0-10.10) ... 455s Setting up initramfs-tools-core (0.146ubuntu1) ... 455s Setting up linux-tools-common (6.14.0-10.10) ... 455s Setting up python3-systemd (235-1build6) ... 455s Setting up python3-cffi-backend:amd64 (1.17.1-2build2) ... 455s Setting up binutils-x86-64-linux-gnu (2.44-3ubuntu1) ... 455s Setting up linux-image-generic (6.14.0-10.10) ... 455s Setting up python3-dbus (1.3.2-5build5) ... 455s Setting up linux-tools-6.14.0-10 (6.14.0-10.10) ... 455s Setting up initramfs-tools (0.146ubuntu1) ... 455s Installing new version of config file /etc/kernel/postinst.d/initramfs-tools ... 455s Installing new version of config file /etc/kernel/postrm.d/initramfs-tools ... 455s update-initramfs: deferring update (trigger activated) 455s Setting up linux-generic (6.14.0-10.10) ... 455s Setting up ubuntu-minimal (1.549) ... 455s Setting up python3-apt (2.9.9build1) ... 455s Setting up python3-bcrypt (4.2.0-2.1build1) ... 456s Setting up python3-yaml (6.0.2-1build2) ... 456s Setting up libfwupd3:amd64 (2.0.6-4) ... 456s Setting up python3-lazr.uri (1.0.6-6) ... 456s Setting up binutils (2.44-3ubuntu1) ... 456s Setting up ubuntu-standard (1.549) ... 456s Setting up cloud-init-base (25.1-0ubuntu3) ... 456s Setting up linux-virtual (6.14.0-10.10) ... 456s Setting up gir1.2-girepository-2.0:amd64 (1.83.4-1) ... 456s Setting up python3-gi (3.50.0-4build1) ... 457s Setting up linux-tools-6.14.0-10-generic (6.14.0-10.10) ... 457s Setting up fwupd (2.0.6-4) ... 457s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 457s fwupd.service is a disabled or a static unit not running, not starting it. 457s Setting up cloud-init (25.1-0ubuntu3) ... 457s Processing triggers for man-db (2.13.0-1) ... 459s Processing triggers for dbus (1.16.2-1ubuntu1) ... 459s Processing triggers for shared-mime-info (2.4-5) ... 459s Warning: program compiled against libxml 212 using older 209 459s Processing triggers for libc-bin (2.41-1ubuntu1) ... 459s Processing triggers for linux-image-6.14.0-10-generic (6.14.0-10.10) ... 459s /etc/kernel/postinst.d/initramfs-tools: 459s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 459s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 468s /etc/kernel/postinst.d/zz-update-grub: 468s Sourcing file `/etc/default/grub' 468s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 468s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 468s Generating grub configuration file ... 468s Found linux image: /boot/vmlinuz-6.14.0-10-generic 468s Found initrd image: /boot/initrd.img-6.14.0-10-generic 468s Found linux image: /boot/vmlinuz-6.12.0-16-generic 468s Found initrd image: /boot/initrd.img-6.12.0-16-generic 469s Found linux image: /boot/vmlinuz-6.11.0-8-generic 469s Found initrd image: /boot/initrd.img-6.11.0-8-generic 469s Warning: os-prober will not be executed to detect other bootable partitions. 469s Systems on them will not be added to the GRUB boot configuration. 469s Check GRUB_DISABLE_OS_PROBER documentation entry. 469s Adding boot menu entry for UEFI Firmware Settings ... 469s done 469s Processing triggers for initramfs-tools (0.146ubuntu1) ... 469s update-initramfs: Generating /boot/initrd.img-6.14.0-10-generic 469s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 478s Reading package lists... 479s Building dependency tree... 479s Reading state information... 479s Solving dependencies... 479s The following packages will be REMOVED: 479s libnl-genl-3-200* libnsl2* libpython3.12-minimal* libpython3.12-stdlib* 479s libpython3.12t64* linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 479s linux-headers-6.12.0-16* linux-headers-6.12.0-16-generic* 479s linux-image-6.11.0-8-generic* linux-image-6.12.0-16-generic* 479s linux-modules-6.11.0-8-generic* linux-modules-6.12.0-16-generic* 479s linux-modules-extra-6.12.0-16-generic* linux-tools-6.11.0-8* 479s linux-tools-6.11.0-8-generic* linux-tools-6.12.0-16* 479s linux-tools-6.12.0-16-generic* 479s 0 upgraded, 0 newly installed, 18 to remove and 1 not upgraded. 479s After this operation, 545 MB disk space will be freed. 479s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 148643 files and directories currently installed.) 479s Removing libnl-genl-3-200:amd64 (3.7.0-1) ... 479s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 479s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 479s Removing libpython3.12t64:amd64 (3.12.9-1) ... 479s Removing libpython3.12-stdlib:amd64 (3.12.9-1) ... 479s Removing libnsl2:amd64 (1.3.0-3build3) ... 479s Removing libpython3.12-minimal:amd64 (3.12.9-1) ... 479s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 480s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 482s Removing linux-headers-6.12.0-16-generic (6.12.0-16.16) ... 482s Removing linux-headers-6.12.0-16 (6.12.0-16.16) ... 484s Removing linux-image-6.11.0-8-generic (6.11.0-8.8) ... 484s /etc/kernel/postrm.d/initramfs-tools: 484s update-initramfs: Deleting /boot/initrd.img-6.11.0-8-generic 484s /etc/kernel/postrm.d/zz-update-grub: 484s Sourcing file `/etc/default/grub' 484s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 484s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 484s Generating grub configuration file ... 484s Found linux image: /boot/vmlinuz-6.14.0-10-generic 484s Found initrd image: /boot/initrd.img-6.14.0-10-generic 484s Found linux image: /boot/vmlinuz-6.12.0-16-generic 484s Found initrd image: /boot/initrd.img-6.12.0-16-generic 485s Warning: os-prober will not be executed to detect other bootable partitions. 485s Systems on them will not be added to the GRUB boot configuration. 485s Check GRUB_DISABLE_OS_PROBER documentation entry. 485s Adding boot menu entry for UEFI Firmware Settings ... 485s done 485s Removing linux-image-6.12.0-16-generic (6.12.0-16.16) ... 485s W: Removing the running kernel 485s I: /boot/vmlinuz.old is now a symlink to vmlinuz-6.14.0-10-generic 485s I: /boot/initrd.img.old is now a symlink to initrd.img-6.14.0-10-generic 485s /etc/kernel/postrm.d/initramfs-tools: 485s update-initramfs: Deleting /boot/initrd.img-6.12.0-16-generic 485s /etc/kernel/postrm.d/zz-update-grub: 485s Sourcing file `/etc/default/grub' 485s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 485s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 485s Generating grub configuration file ... 485s Found linux image: /boot/vmlinuz-6.14.0-10-generic 485s Found initrd image: /boot/initrd.img-6.14.0-10-generic 485s Warning: os-prober will not be executed to detect other bootable partitions. 485s Systems on them will not be added to the GRUB boot configuration. 485s Check GRUB_DISABLE_OS_PROBER documentation entry. 485s Adding boot menu entry for UEFI Firmware Settings ... 485s done 485s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 485s Removing linux-modules-extra-6.12.0-16-generic (6.12.0-16.16) ... 487s Removing linux-modules-6.12.0-16-generic (6.12.0-16.16) ... 487s Removing linux-tools-6.12.0-16-generic (6.12.0-16.16) ... 487s Removing linux-tools-6.12.0-16 (6.12.0-16.16) ... 487s Processing triggers for libc-bin (2.41-1ubuntu1) ... 487s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76972 files and directories currently installed.) 487s Purging configuration files for linux-image-6.11.0-8-generic (6.11.0-8.8) ... 487s Purging configuration files for libpython3.12-minimal:amd64 (3.12.9-1) ... 487s Purging configuration files for linux-modules-extra-6.12.0-16-generic (6.12.0-16.16) ... 487s Purging configuration files for linux-modules-6.12.0-16-generic (6.12.0-16.16) ... 487s dpkg: warning: while removing linux-modules-6.12.0-16-generic, directory '/lib/modules/6.12.0-16-generic' not empty so not removed 487s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 487s Purging configuration files for linux-image-6.12.0-16-generic (6.12.0-16.16) ... 487s rmdir: failed to remove '/lib/modules/6.12.0-16-generic': Directory not empty 487s autopkgtest [01:50:21]: upgrading testbed (apt dist-upgrade and autopurge) 488s Reading package lists... 488s Building dependency tree... 488s Reading state information... 488s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 488s Starting 2 pkgProblemResolver with broken count: 0 488s Done 488s Entering ResolveByKeep 489s 489s Calculating upgrade... 489s The following packages will be upgraded: 489s libpng16-16t64 489s 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 489s Need to get 217 kB of archives. 489s After this operation, 0 B of additional disk space will be used. 489s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpng16-16t64 amd64 1.6.47-1.1 [217 kB] 489s Fetched 217 kB in 0s (522 kB/s) 489s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 489s Preparing to unpack .../libpng16-16t64_1.6.47-1.1_amd64.deb ... 489s Unpacking libpng16-16t64:amd64 (1.6.47-1.1) over (1.6.47-1) ... 489s Setting up libpng16-16t64:amd64 (1.6.47-1.1) ... 489s Processing triggers for libc-bin (2.41-1ubuntu1) ... 490s Reading package lists... 490s Building dependency tree... 490s Reading state information... 490s Starting pkgProblemResolver with broken count: 0 490s Starting 2 pkgProblemResolver with broken count: 0 490s Done 490s Solving dependencies... 491s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 491s autopkgtest [01:50:25]: rebooting testbed after setup commands that affected boot 518s Reading package lists... 518s Building dependency tree... 518s Reading state information... 518s Starting pkgProblemResolver with broken count: 0 518s Starting 2 pkgProblemResolver with broken count: 0 518s Done 519s The following NEW packages will be installed: 519s autoconf automake autotools-dev cpp-14 cpp-14-x86-64-linux-gnu 519s fontconfig-config fonts-dejavu-core fonts-dejavu-mono gcc-14 519s gcc-14-x86-64-linux-gnu gfortran-14 gfortran-14-x86-64-linux-gnu libaec0 519s libamd-comgr2 libamdhip64-5 libasan8 libblas3 libcairo2 libcc1-0 libdeflate0 519s libdouble-conversion3 libdrm-intel1 libevent-2.1-7t64 libevent-dev 519s libevent-extra-2.1-7t64 libevent-openssl-2.1-7t64 libevent-pthreads-2.1-7t64 519s libfabric1 libfftw3-double3 libfontconfig1 libgbm1 libgcc-14-dev 519s libgfortran-14-dev libgfortran5 libgl1 libgl1-mesa-dri libgl2ps1.4 519s libglew2.2 libglvnd0 libglx-mesa0 libglx0 libgomp1 libhdf5-310 519s libhdf5-hl-310 libhsa-runtime64-1 libhsakmt1 libhwasan0 libhwloc-dev 519s libhwloc-plugins libhwloc15 libibmad5 libibumad3 libibverbs-dev libisl23 519s libitm1 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui 519s libjsoncpp26 libkim-api2 liblammps-dev liblammps0t64 liblapack3 liblerc4 519s libllvm17t64 liblsan0 libltdl-dev libltdl7 libmpc3 libmunge2 libnetcdf22 519s libnl-3-dev libnl-route-3-dev libnuma-dev libogg0 libopengl0 libopenmpi-dev 519s libopenmpi40 libpciaccess0 libpixman-1-0 libpmix-dev libpmix2t64 libpnetcdf6 519s libproj25 libpsm-infinipath1 libpsm2-2 libquadmath0 librdmacm1t64 519s libsharpyuv0 libsz2 libtbb12 libtbbbind-2-5 libtbbmalloc2 libtcl8.6 519s libtheoradec1 libtheoraenc1 libtiff6 libtk8.6 libtsan2 libubsan1 libucx0 519s libvoro++1 libvtk9.3 libvulkan1 libwayland-server0 libwebp7 libx11-xcb1 519s libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 519s libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxft2 libxnvctrl0 libxrender1 519s libxshmfence1 libxss1 libxxf86vm1 m4 mesa-libgallium mpi-default-bin 519s mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common proj-data 519s python3-lammps x11-common zlib1g-dev 519s 0 upgraded, 134 newly installed, 0 to remove and 0 not upgraded. 519s Need to get 202 MB of archives. 519s After this operation, 793 MB of additional disk space will be used. 519s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 m4 amd64 1.4.19-7 [263 kB] 519s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 autoconf all 2.72-3ubuntu1 [383 kB] 519s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 autotools-dev all 20220109.1 [44.9 kB] 519s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 automake all 1:1.17-3ubuntu1 [572 kB] 519s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 519s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 519s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [11.9 MB] 520s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-17ubuntu3 [1030 B] 520s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 520s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 520s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-2ubuntu1 [37.4 kB] 520s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 15-20250222-0ubuntu1 [47.0 kB] 520s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 15-20250222-0ubuntu1 [148 kB] 520s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 15-20250222-0ubuntu1 [28.6 kB] 520s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 15-20250222-0ubuntu1 [3055 kB] 520s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 15-20250222-0ubuntu1 [1355 kB] 520s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 15-20250222-0ubuntu1 [2756 kB] 520s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 15-20250222-0ubuntu1 [1205 kB] 520s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 15-20250222-0ubuntu1 [1677 kB] 520s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 15-20250222-0ubuntu1 [152 kB] 520s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-17ubuntu3 [2816 kB] 520s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [23.3 MB] 521s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-17ubuntu3 [536 kB] 521s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 15-20250222-0ubuntu1 [919 kB] 521s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran-14-dev amd64 14.2.0-17ubuntu3 [966 kB] 521s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-17ubuntu3 [12.6 MB] 522s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 gfortran-14 amd64 14.2.0-17ubuntu3 [13.6 kB] 522s Get:28 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 522s Get:29 http://ftpmaster.internal/ubuntu plucky/universe amd64 libllvm17t64 amd64 1:17.0.6-21 [26.0 MB] 523s Get:30 http://ftpmaster.internal/ubuntu plucky/universe amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3build2 [14.4 MB] 523s Get:31 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhsakmt1 amd64 5.7.0-1build1 [62.9 kB] 523s Get:32 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhsa-runtime64-1 amd64 5.7.1-2build1 [491 kB] 523s Get:33 http://ftpmaster.internal/ubuntu plucky/universe amd64 libamdhip64-5 amd64 5.7.1-5 [9643 kB] 524s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 524s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-2ubuntu1 [164 kB] 524s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 524s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 524s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 524s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 524s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 524s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.23-1 [64.1 kB] 524s Get:42 http://ftpmaster.internal/ubuntu plucky/universe amd64 libdouble-conversion3 amd64 3.3.1-1 [41.7 kB] 524s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libpciaccess0 amd64 0.17-3build1 [18.6 kB] 524s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libdrm-intel1 amd64 2.4.123-1 [68.8 kB] 524s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10 [144 kB] 524s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libevent-extra-2.1-7t64 amd64 2.1.12-stable-10 [64.2 kB] 524s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10 [7966 B] 524s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libevent-openssl-2.1-7t64 amd64 2.1.12-stable-10 [15.7 kB] 524s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libevent-dev amd64 2.1.12-stable-10 [274 kB] 524s Get:50 http://ftpmaster.internal/ubuntu plucky/universe amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.3build1 [178 kB] 524s Get:51 http://ftpmaster.internal/ubuntu plucky/universe amd64 libpsm2-2 amd64 11.2.185-2.1 [193 kB] 524s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 librdmacm1t64 amd64 55.0-1ubuntu1 [71.5 kB] 524s Get:53 http://ftpmaster.internal/ubuntu plucky/universe amd64 libfabric1 amd64 1.17.0-3.1 [789 kB] 524s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libfftw3-double3 amd64 3.3.10-2fakesync1build1 [839 kB] 524s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libwayland-server0 amd64 1.23.1-3 [37.2 kB] 524s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libx11-xcb1 amd64 2:1.8.10-2 [7944 B] 524s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-dri3-0 amd64 1.17.0-2 [7508 B] 524s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-present0 amd64 1.17.0-2 [6064 B] 524s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-randr0 amd64 1.17.0-2 [17.9 kB] 524s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-sync1 amd64 1.17.0-2 [9312 B] 524s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-xfixes0 amd64 1.17.0-2 [10.2 kB] 524s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libxshmfence1 amd64 1.3-1build5 [4764 B] 524s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 mesa-libgallium amd64 25.0.1-2ubuntu1 [12.1 MB] 525s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libgbm1 amd64 25.0.1-2ubuntu1 [33.4 kB] 525s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libvulkan1 amd64 1.4.304.0-1 [147 kB] 525s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libgl1-mesa-dri amd64 25.0.1-2ubuntu1 [35.7 kB] 525s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libglvnd0 amd64 1.7.0-1build1 [69.6 kB] 525s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-glx0 amd64 1.17.0-2 [24.8 kB] 525s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 libxxf86vm1 amd64 1:1.1.4-1build4 [9282 B] 525s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 libglx-mesa0 amd64 25.0.1-2ubuntu1 [146 kB] 525s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 libglx0 amd64 1.7.0-1build1 [38.6 kB] 525s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 libgl1 amd64 1.7.0-1build1 [102 kB] 525s Get:73 http://ftpmaster.internal/ubuntu plucky/universe amd64 libgl2ps1.4 amd64 1.4.2+dfsg1-2build1 [41.9 kB] 525s Get:74 http://ftpmaster.internal/ubuntu plucky/universe amd64 libglew2.2 amd64 2.2.0-4build1 [187 kB] 525s Get:75 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 525s Get:76 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-310 amd64 1.14.5+repack-3 [1519 kB] 525s Get:77 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-310 amd64 1.14.5+repack-3 [62.6 kB] 525s Get:78 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhwloc15 amd64 2.12.0-1 [194 kB] 525s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 525s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 525s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 525s Get:82 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 525s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 libjsoncpp26 amd64 1.9.6-3 [90.0 kB] 525s Get:84 http://ftpmaster.internal/ubuntu plucky/universe amd64 libkim-api2 amd64 2.3.0-1ubuntu1 [588 kB] 525s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 525s Get:86 http://ftpmaster.internal/ubuntu plucky/universe amd64 libnetcdf22 amd64 1:4.9.3-1 [574 kB] 525s Get:87 http://ftpmaster.internal/ubuntu plucky/universe amd64 libmunge2 amd64 0.5.16-1 [16.5 kB] 525s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 libxnvctrl0 amd64 510.47.03-0ubuntu4 [12.6 kB] 525s Get:89 http://ftpmaster.internal/ubuntu plucky/universe amd64 ocl-icd-libopencl1 amd64 2.3.2-1build1 [38.5 kB] 525s Get:90 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhwloc-plugins amd64 2.12.0-1 [16.0 kB] 525s Get:91 http://ftpmaster.internal/ubuntu plucky/universe amd64 libpmix2t64 amd64 5.0.6-5 [714 kB] 525s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libibumad3 amd64 55.0-1ubuntu1 [29.7 kB] 525s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 libibmad5 amd64 55.0-1ubuntu1 [42.7 kB] 525s Get:94 http://ftpmaster.internal/ubuntu plucky/universe amd64 libucx0 amd64 1.18.1+ds-2 [1293 kB] 525s Get:95 http://ftpmaster.internal/ubuntu plucky/universe amd64 libopenmpi40 amd64 5.0.7-1 [2526 kB] 525s Get:96 http://ftpmaster.internal/ubuntu plucky/universe amd64 libpnetcdf6 amd64 1.14.0-2 [1059 kB] 525s Get:97 http://ftpmaster.internal/ubuntu plucky/universe amd64 libvoro++1 amd64 0.5+revert-to-0.4.6+dfsg1-1 [119 kB] 525s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 libogg0 amd64 1.3.5-3build1 [22.7 kB] 525s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 libopengl0 amd64 1.7.0-1build1 [32.8 kB] 525s Get:100 http://ftpmaster.internal/ubuntu plucky/universe amd64 proj-data all 9.5.1-1 [7924 kB] 526s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 526s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 526s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 526s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 526s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 526s Get:106 http://ftpmaster.internal/ubuntu plucky/universe amd64 libproj25 amd64 9.5.1-1 [1499 kB] 527s Get:107 http://ftpmaster.internal/ubuntu plucky/universe amd64 libtbbbind-2-5 amd64 2022.0.0-2 [15.8 kB] 527s Get:108 http://ftpmaster.internal/ubuntu plucky/universe amd64 libtbbmalloc2 amd64 2022.0.0-2 [55.7 kB] 527s Get:109 http://ftpmaster.internal/ubuntu plucky/universe amd64 libtbb12 amd64 2022.0.0-2 [103 kB] 527s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB] 527s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 libtheoradec1 amd64 1.2.0~alpha1+dfsg-5 [70.2 kB] 527s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 libtheoraenc1 amd64 1.2.0~alpha1+dfsg-5 [115 kB] 527s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 527s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 527s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 527s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB] 527s Get:117 http://ftpmaster.internal/ubuntu plucky/universe amd64 libvtk9.3 amd64 9.3.0+dfsg1-4ubuntu1 [25.3 MB] 529s Get:118 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblammps0t64 amd64 20240207+dfsg-3build3 [8393 kB] 529s Get:119 http://ftpmaster.internal/ubuntu plucky/universe amd64 openmpi-common all 5.0.7-1 [97.9 kB] 529s Get:120 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-3-dev amd64 3.7.0-1 [113 kB] 529s Get:121 http://ftpmaster.internal/ubuntu plucky/main amd64 libnl-route-3-dev amd64 3.7.0-1 [224 kB] 529s Get:122 http://ftpmaster.internal/ubuntu plucky/main amd64 libibverbs-dev amd64 55.0-1ubuntu1 [685 kB] 529s Get:123 http://ftpmaster.internal/ubuntu plucky/main amd64 libnuma-dev amd64 2.0.18-1build1 [37.0 kB] 529s Get:124 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl7 amd64 2.5.4-4 [46.5 kB] 529s Get:125 http://ftpmaster.internal/ubuntu plucky/main amd64 libltdl-dev amd64 2.5.4-4 [176 kB] 529s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhwloc-dev amd64 2.12.0-1 [290 kB] 529s Get:127 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 530s Get:128 http://ftpmaster.internal/ubuntu plucky/universe amd64 libpmix-dev amd64 5.0.6-5 [4060 kB] 530s Get:129 http://ftpmaster.internal/ubuntu plucky/universe amd64 openmpi-bin amd64 5.0.7-1 [192 kB] 530s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 libopenmpi-dev amd64 5.0.7-1 [1085 kB] 530s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 mpi-default-dev amd64 1.18 [3320 B] 530s Get:132 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblammps-dev amd64 20240207+dfsg-3build3 [112 kB] 530s Get:133 http://ftpmaster.internal/ubuntu plucky/universe amd64 mpi-default-bin amd64 1.18 [2510 B] 530s Get:134 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-lammps amd64 20240207+dfsg-3build3 [70.5 kB] 530s Fetched 202 MB in 11s (18.0 MB/s) 530s Selecting previously unselected package m4. 531s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76968 files and directories currently installed.) 531s Preparing to unpack .../000-m4_1.4.19-7_amd64.deb ... 531s Unpacking m4 (1.4.19-7) ... 531s Selecting previously unselected package autoconf. 531s Preparing to unpack .../001-autoconf_2.72-3ubuntu1_all.deb ... 531s Unpacking autoconf (2.72-3ubuntu1) ... 531s Selecting previously unselected package autotools-dev. 531s Preparing to unpack .../002-autotools-dev_20220109.1_all.deb ... 531s Unpacking autotools-dev (20220109.1) ... 531s Selecting previously unselected package automake. 531s Preparing to unpack .../003-automake_1%3a1.17-3ubuntu1_all.deb ... 531s Unpacking automake (1:1.17-3ubuntu1) ... 531s Selecting previously unselected package libisl23:amd64. 531s Preparing to unpack .../004-libisl23_0.27-1_amd64.deb ... 531s Unpacking libisl23:amd64 (0.27-1) ... 531s Selecting previously unselected package libmpc3:amd64. 531s Preparing to unpack .../005-libmpc3_1.3.1-1build2_amd64.deb ... 531s Unpacking libmpc3:amd64 (1.3.1-1build2) ... 531s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 531s Preparing to unpack .../006-cpp-14-x86-64-linux-gnu_14.2.0-17ubuntu3_amd64.deb ... 531s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 531s Selecting previously unselected package cpp-14. 531s Preparing to unpack .../007-cpp-14_14.2.0-17ubuntu3_amd64.deb ... 531s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 531s Selecting previously unselected package fonts-dejavu-mono. 531s Preparing to unpack .../008-fonts-dejavu-mono_2.37-8_all.deb ... 531s Unpacking fonts-dejavu-mono (2.37-8) ... 531s Selecting previously unselected package fonts-dejavu-core. 531s Preparing to unpack .../009-fonts-dejavu-core_2.37-8_all.deb ... 531s Unpacking fonts-dejavu-core (2.37-8) ... 531s Selecting previously unselected package fontconfig-config. 531s Preparing to unpack .../010-fontconfig-config_2.15.0-2ubuntu1_amd64.deb ... 531s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 531s Selecting previously unselected package libcc1-0:amd64. 531s Preparing to unpack .../011-libcc1-0_15-20250222-0ubuntu1_amd64.deb ... 531s Unpacking libcc1-0:amd64 (15-20250222-0ubuntu1) ... 531s Selecting previously unselected package libgomp1:amd64. 531s Preparing to unpack .../012-libgomp1_15-20250222-0ubuntu1_amd64.deb ... 531s Unpacking libgomp1:amd64 (15-20250222-0ubuntu1) ... 531s Selecting previously unselected package libitm1:amd64. 531s Preparing to unpack .../013-libitm1_15-20250222-0ubuntu1_amd64.deb ... 531s Unpacking libitm1:amd64 (15-20250222-0ubuntu1) ... 532s Selecting previously unselected package libasan8:amd64. 532s Preparing to unpack .../014-libasan8_15-20250222-0ubuntu1_amd64.deb ... 532s Unpacking libasan8:amd64 (15-20250222-0ubuntu1) ... 532s Selecting previously unselected package liblsan0:amd64. 532s Preparing to unpack .../015-liblsan0_15-20250222-0ubuntu1_amd64.deb ... 532s Unpacking liblsan0:amd64 (15-20250222-0ubuntu1) ... 532s Selecting previously unselected package libtsan2:amd64. 532s Preparing to unpack .../016-libtsan2_15-20250222-0ubuntu1_amd64.deb ... 532s Unpacking libtsan2:amd64 (15-20250222-0ubuntu1) ... 532s Selecting previously unselected package libubsan1:amd64. 532s Preparing to unpack .../017-libubsan1_15-20250222-0ubuntu1_amd64.deb ... 532s Unpacking libubsan1:amd64 (15-20250222-0ubuntu1) ... 532s Selecting previously unselected package libhwasan0:amd64. 532s Preparing to unpack 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Selecting previously unselected package libevent-2.1-7t64:amd64. 534s Preparing to unpack .../044-libevent-2.1-7t64_2.1.12-stable-10_amd64.deb ... 534s Unpacking libevent-2.1-7t64:amd64 (2.1.12-stable-10) ... 534s Selecting previously unselected package libevent-extra-2.1-7t64:amd64. 534s Preparing to unpack .../045-libevent-extra-2.1-7t64_2.1.12-stable-10_amd64.deb ... 534s Unpacking libevent-extra-2.1-7t64:amd64 (2.1.12-stable-10) ... 534s Selecting previously unselected package libevent-pthreads-2.1-7t64:amd64. 534s Preparing to unpack .../046-libevent-pthreads-2.1-7t64_2.1.12-stable-10_amd64.deb ... 534s Unpacking libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10) ... 534s Selecting previously unselected package libevent-openssl-2.1-7t64:amd64. 534s Preparing to unpack .../047-libevent-openssl-2.1-7t64_2.1.12-stable-10_amd64.deb ... 534s Unpacking libevent-openssl-2.1-7t64:amd64 (2.1.12-stable-10) ... 534s Selecting previously unselected package libevent-dev. 534s Preparing to unpack .../048-libevent-dev_2.1.12-stable-10_amd64.deb ... 534s Unpacking libevent-dev (2.1.12-stable-10) ... 534s Selecting previously unselected package libpsm-infinipath1. 534s Preparing to unpack .../049-libpsm-infinipath1_3.3+20.604758e7-6.3build1_amd64.deb ... 534s Unpacking libpsm-infinipath1 (3.3+20.604758e7-6.3build1) ... 534s Selecting previously unselected package libpsm2-2. 534s Preparing to unpack .../050-libpsm2-2_11.2.185-2.1_amd64.deb ... 534s Unpacking libpsm2-2 (11.2.185-2.1) ... 534s Selecting previously unselected package librdmacm1t64:amd64. 534s Preparing to unpack .../051-librdmacm1t64_55.0-1ubuntu1_amd64.deb ... 534s Unpacking librdmacm1t64:amd64 (55.0-1ubuntu1) ... 534s Selecting previously unselected package libfabric1:amd64. 534s Preparing to unpack .../052-libfabric1_1.17.0-3.1_amd64.deb ... 534s Unpacking libfabric1:amd64 (1.17.0-3.1) ... 534s Selecting previously unselected package libfftw3-double3:amd64. 534s Preparing to unpack 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Unpacking libgbm1:amd64 (25.0.1-2ubuntu1) ... 534s Selecting previously unselected package libvulkan1:amd64. 534s Preparing to unpack .../064-libvulkan1_1.4.304.0-1_amd64.deb ... 534s Unpacking libvulkan1:amd64 (1.4.304.0-1) ... 534s Selecting previously unselected package libgl1-mesa-dri:amd64. 534s Preparing to unpack .../065-libgl1-mesa-dri_25.0.1-2ubuntu1_amd64.deb ... 534s Unpacking libgl1-mesa-dri:amd64 (25.0.1-2ubuntu1) ... 534s Selecting previously unselected package libglvnd0:amd64. 534s Preparing to unpack .../066-libglvnd0_1.7.0-1build1_amd64.deb ... 534s Unpacking libglvnd0:amd64 (1.7.0-1build1) ... 534s Selecting previously unselected package libxcb-glx0:amd64. 535s Preparing to unpack .../067-libxcb-glx0_1.17.0-2_amd64.deb ... 535s Unpacking libxcb-glx0:amd64 (1.17.0-2) ... 535s Selecting previously unselected package libxxf86vm1:amd64. 535s Preparing to unpack .../068-libxxf86vm1_1%3a1.1.4-1build4_amd64.deb ... 535s Unpacking libxxf86vm1:amd64 (1:1.1.4-1build4) ... 535s Selecting previously unselected package libglx-mesa0:amd64. 535s Preparing to unpack .../069-libglx-mesa0_25.0.1-2ubuntu1_amd64.deb ... 535s Unpacking libglx-mesa0:amd64 (25.0.1-2ubuntu1) ... 535s Selecting previously unselected package libglx0:amd64. 535s Preparing to unpack .../070-libglx0_1.7.0-1build1_amd64.deb ... 535s Unpacking libglx0:amd64 (1.7.0-1build1) ... 535s Selecting previously unselected package libgl1:amd64. 535s Preparing to unpack .../071-libgl1_1.7.0-1build1_amd64.deb ... 535s Unpacking libgl1:amd64 (1.7.0-1build1) ... 535s Selecting previously unselected package libgl2ps1.4. 535s Preparing to unpack .../072-libgl2ps1.4_1.4.2+dfsg1-2build1_amd64.deb ... 535s Unpacking libgl2ps1.4 (1.4.2+dfsg1-2build1) ... 535s Selecting previously unselected package libglew2.2:amd64. 535s Preparing to unpack .../073-libglew2.2_2.2.0-4build1_amd64.deb ... 535s Unpacking libglew2.2:amd64 (2.2.0-4build1) ... 535s Selecting previously unselected package libsz2:amd64. 535s Preparing to unpack .../074-libsz2_1.1.3-1_amd64.deb ... 535s Unpacking libsz2:amd64 (1.1.3-1) ... 535s Selecting previously unselected package libhdf5-310:amd64. 535s Preparing to unpack .../075-libhdf5-310_1.14.5+repack-3_amd64.deb ... 535s Unpacking libhdf5-310:amd64 (1.14.5+repack-3) ... 535s Selecting previously unselected package libhdf5-hl-310:amd64. 535s Preparing to unpack .../076-libhdf5-hl-310_1.14.5+repack-3_amd64.deb ... 535s Unpacking libhdf5-hl-310:amd64 (1.14.5+repack-3) ... 535s Selecting previously unselected package libhwloc15:amd64. 535s Preparing to unpack .../077-libhwloc15_2.12.0-1_amd64.deb ... 535s Unpacking libhwloc15:amd64 (2.12.0-1) ... 535s Selecting previously unselected package libjpeg-turbo8:amd64. 535s Preparing to unpack .../078-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ... 535s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 535s Selecting previously unselected package libjpeg8:amd64. 535s Preparing to unpack .../079-libjpeg8_8c-2ubuntu11_amd64.deb ... 535s 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unselected package libnetcdf22:amd64. 535s Preparing to unpack .../085-libnetcdf22_1%3a4.9.3-1_amd64.deb ... 535s Unpacking libnetcdf22:amd64 (1:4.9.3-1) ... 535s Selecting previously unselected package libmunge2:amd64. 535s Preparing to unpack .../086-libmunge2_0.5.16-1_amd64.deb ... 535s Unpacking libmunge2:amd64 (0.5.16-1) ... 535s Selecting previously unselected package libxnvctrl0:amd64. 535s Preparing to unpack .../087-libxnvctrl0_510.47.03-0ubuntu4_amd64.deb ... 535s Unpacking libxnvctrl0:amd64 (510.47.03-0ubuntu4) ... 535s Selecting previously unselected package ocl-icd-libopencl1:amd64. 535s Preparing to unpack .../088-ocl-icd-libopencl1_2.3.2-1build1_amd64.deb ... 535s Unpacking ocl-icd-libopencl1:amd64 (2.3.2-1build1) ... 535s Selecting previously unselected package libhwloc-plugins:amd64. 535s Preparing to unpack .../089-libhwloc-plugins_2.12.0-1_amd64.deb ... 535s Unpacking libhwloc-plugins:amd64 (2.12.0-1) ... 535s Selecting previously unselected package libpmix2t64:amd64. 535s Preparing to unpack .../090-libpmix2t64_5.0.6-5_amd64.deb ... 535s Unpacking libpmix2t64:amd64 (5.0.6-5) ... 535s Selecting previously unselected package libibumad3:amd64. 535s Preparing to unpack .../091-libibumad3_55.0-1ubuntu1_amd64.deb ... 535s Unpacking libibumad3:amd64 (55.0-1ubuntu1) ... 535s Selecting previously unselected package libibmad5:amd64. 535s Preparing to unpack .../092-libibmad5_55.0-1ubuntu1_amd64.deb ... 535s Unpacking libibmad5:amd64 (55.0-1ubuntu1) ... 535s Selecting previously unselected package libucx0:amd64. 535s Preparing to unpack .../093-libucx0_1.18.1+ds-2_amd64.deb ... 535s Unpacking libucx0:amd64 (1.18.1+ds-2) ... 535s Selecting previously unselected package libopenmpi40:amd64. 535s Preparing to unpack .../094-libopenmpi40_5.0.7-1_amd64.deb ... 535s Unpacking libopenmpi40:amd64 (5.0.7-1) ... 535s Selecting previously unselected package libpnetcdf6:amd64. 535s Preparing to unpack .../095-libpnetcdf6_1.14.0-2_amd64.deb ... 535s Unpacking libpnetcdf6:amd64 (1.14.0-2) ... 535s Selecting previously unselected package libvoro++1. 535s Preparing to unpack .../096-libvoro++1_0.5+revert-to-0.4.6+dfsg1-1_amd64.deb ... 535s Unpacking libvoro++1 (0.5+revert-to-0.4.6+dfsg1-1) ... 535s Selecting previously unselected package libogg0:amd64. 535s Preparing to unpack .../097-libogg0_1.3.5-3build1_amd64.deb ... 535s Unpacking libogg0:amd64 (1.3.5-3build1) ... 535s Selecting previously unselected package libopengl0:amd64. 535s Preparing to unpack .../098-libopengl0_1.7.0-1build1_amd64.deb ... 535s Unpacking libopengl0:amd64 (1.7.0-1build1) ... 535s Selecting previously unselected package proj-data. 535s Preparing to unpack .../099-proj-data_9.5.1-1_all.deb ... 535s Unpacking proj-data (9.5.1-1) ... 536s Selecting previously unselected package libjbig0:amd64. 536s Preparing to unpack .../100-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 536s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 536s Selecting previously unselected package liblerc4:amd64. 536s Preparing to unpack .../101-liblerc4_4.0.0+ds-5ubuntu1_amd64.deb ... 536s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 536s Selecting previously unselected package libsharpyuv0:amd64. 536s Preparing to unpack .../102-libsharpyuv0_1.5.0-0.1_amd64.deb ... 536s Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ... 536s Selecting previously unselected package libwebp7:amd64. 536s Preparing to unpack .../103-libwebp7_1.5.0-0.1_amd64.deb ... 536s Unpacking libwebp7:amd64 (1.5.0-0.1) ... 536s Selecting previously unselected package libtiff6:amd64. 538s Preparing to unpack .../104-libtiff6_4.5.1+git230720-4ubuntu4_amd64.deb ... 538s Unpacking libtiff6:amd64 (4.5.1+git230720-4ubuntu4) ... 538s Selecting previously unselected package libproj25:amd64. 538s Preparing to unpack .../105-libproj25_9.5.1-1_amd64.deb ... 538s Unpacking libproj25:amd64 (9.5.1-1) ... 538s Selecting previously unselected package libtbbbind-2-5:amd64. 538s Preparing to unpack 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Setting up libamdhip64-5 (5.7.1-5) ... 538s Setting up libtheoradec1:amd64 (1.2.0~alpha1+dfsg-5) ... 538s Setting up libglew2.2:amd64 (2.2.0-4build1) ... 538s Setting up gcc-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 538s Setting up libucx0:amd64 (1.18.1+ds-2) ... 538s Setting up libgl2ps1.4 (1.4.2+dfsg1-2build1) ... 538s Setting up gcc-14 (14.2.0-17ubuntu3) ... 538s Setting up gfortran-14-x86-64-linux-gnu (14.2.0-17ubuntu3) ... 538s Setting up gfortran-14 (14.2.0-17ubuntu3) ... 538s Setting up libopenmpi40:amd64 (5.0.7-1) ... 538s Setting up libpnetcdf6:amd64 (1.14.0-2) ... 538s Setting up libvtk9.3:amd64 (9.3.0+dfsg1-4ubuntu1) ... 538s Setting up openmpi-bin (5.0.7-1) ... 538s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 538s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 538s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 538s Setting up mpi-default-bin (1.18) ... 538s Setting up liblammps0t64:amd64 (20240207+dfsg-3build3) ... 538s Setting up libopenmpi-dev:amd64 (5.0.7-1) ... 538s update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode 538s Setting up mpi-default-dev (1.18) ... 538s Setting up liblammps-dev (20240207+dfsg-3build3) ... 538s Setting up python3-lammps (20240207+dfsg-3build3) ... 538s Processing triggers for man-db (2.13.0-1) ... 539s Processing triggers for install-info (7.1.1-1) ... 539s Processing triggers for libc-bin (2.41-1ubuntu1) ... 604s autopkgtest [01:52:18]: test command1: cd python/examples; python3 demo.py 605s autopkgtest [01:52:18]: test command1: [----------------------- 605s LAMMPS (7 Feb 2024 - Update 1) 605s 605s Python output: 605s Natoms, mass, x[0][0] coord = 4000 1.0 16.767988851705528 605s Temperature from compute = 0.7571533403732014 605s Energy from equal-style variable = -5.758142569688168 605s Velocity component from atom-style variable = -1.0131655567386921 605s Volume from get_thermo = 4738.213693437576 605s Natoms from get_natoms = 4000 605s Global coords from gather_atoms = 16.767988851705528 16.621004261651628 0.14158807746974947 605s Changed x[0][0] via scatter_atoms = 17.767988851705528 605s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 605s using 1 OpenMP thread(s) per MPI task 605s Lattice spacing in x,y,z = 1.6795962 1.6795962 1.6795962 605s Created orthogonal box = (0 0 0) to (16.795962 16.795962 16.795962) 605s 1 by 1 by 1 MPI processor grid 605s Created 4000 atoms 605s using lattice units in orthogonal box = (0 0 0) to (16.795962 16.795962 16.795962) 605s create_atoms CPU = 0.001 seconds 605s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 605s Neighbor list info ... 605s update: every = 20 steps, delay = 0 steps, check = no 605s max neighbors/atom: 2000, page size: 100000 605s master list distance cutoff = 2.8 605s ghost atom cutoff = 2.8 605s binsize = 1.4, bins = 12 12 12 605s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 605s (1) pair lj/cut, perpetual 605s attributes: half, newton on 605s pair build: half/bin/atomonly/newton 605s stencil: half/bin/3d 605s bin: standard 605s Setting up Verlet run ... 605s Unit style : lj 605s Current step : 0 605s Time step : 0.005 605s Per MPI rank memory allocation (min/avg/max) = 3.763 | 3.763 | 3.763 Mbytes 605s Step Temp E_pair E_mol TotEng Press 605s 0 1.44 -6.7733681 0 -4.6139081 -5.0199732 605s 100 0.75715334 -5.7581426 0 -4.6226965 0.20850222 605s Loop time of 0.182432 on 1 procs for 100 steps with 4000 atoms 605s 605s Performance: 236800.565 tau/day, 548.149 timesteps/s, 2.193 Matom-step/s 605s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads 605s 605s MPI task timing breakdown: 605s Section | min time | avg time | max time |%varavg| %total 605s --------------------------------------------------------------- 605s Pair | 0.15098 | 0.15098 | 0.15098 | 0.0 | 82.76 605s Neigh | 0.025251 | 0.025251 | 0.025251 | 0.0 | 13.84 605s Comm | 0.0031895 | 0.0031895 | 0.0031895 | 0.0 | 1.75 605s Output | 4.1178e-05 | 4.1178e-05 | 4.1178e-05 | 0.0 | 0.02 605s Modify | 0.0024186 | 0.0024186 | 0.0024186 | 0.0 | 1.33 605s Other | | 0.0005501 | | | 0.30 605s 605s Nlocal: 4000 ave 4000 max 4000 min 605s Histogram: 1 0 0 0 0 0 0 0 0 0 605s Nghost: 5754 ave 5754 max 5754 min 605s Histogram: 1 0 0 0 0 0 0 0 0 0 605s Neighs: 150362 ave 150362 max 150362 min 605s Histogram: 1 0 0 0 0 0 0 0 0 0 605s 605s Total # of neighbors = 150362 605s Ave neighs/atom = 37.5905 605s Neighbor list builds = 5 605s Dangerous builds not checked 605s Total wall time: 0:00:00 605s autopkgtest [01:52:19]: test command1: -----------------------] 606s command1 PASS 606s autopkgtest [01:52:20]: test command1: - - - - - - - - - - results - - - - - - - - - - 606s autopkgtest [01:52:20]: @@@@@@@@@@@@@@@@@@@@ summary 606s crack PASS 606s dipole PASS 606s ellipse PASS 606s flow PASS 606s friction PASS 606s hugo PASS 606s command1 PASS 611s nova [W] Skipping flock for amd64 611s Creating nova instance adt-plucky-amd64-lammps-20250316-011642-juju-7f2275-prod-proposed-migration-environment-20-ae23fbb1-ffc9-4a9c-9a07-95f6fc486cb3 from image adt/ubuntu-plucky-amd64-server-20250304.img (UUID 9c7d4da5-d95f-4c85-ac1f-51eb37e75c4c)... 611s nova [W] Timed out waiting for 930cc174-d881-4111-93cb-68050d07ddf8 to get deleted. 611s nova [W] Skipping flock for amd64 611s Creating nova instance adt-plucky-amd64-lammps-20250316-011642-juju-7f2275-prod-proposed-migration-environment-20-ae23fbb1-ffc9-4a9c-9a07-95f6fc486cb3 from image adt/ubuntu-plucky-amd64-server-20250304.img (UUID 9c7d4da5-d95f-4c85-ac1f-51eb37e75c4c)... 611s nova [W] Timed out waiting for c9ff6c04-cc1d-4a57-9a72-ae8516b56be3 to get deleted.