0s autopkgtest [09:07:15]: starting date and time: 2024-11-30 09:07:15+0000 0s autopkgtest [09:07:15]: git checkout: be626eda Fix armhf LXD image generation for plucky 0s autopkgtest [09:07:15]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.47z0r2pp/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:fftw3,src:openmpi --apt-upgrade glam2 --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=fftw3/3.3.10-2fakesync1build1 openmpi/5.0.6-2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-10.secgroup --name adt-plucky-amd64-glam2-20241130-090715-juju-7f2275-prod-proposed-migration-environment-15-cf093952-cb87-4206-8dc1-4dbe7f0368dd --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 53s autopkgtest [09:08:08]: testbed dpkg architecture: amd64 53s autopkgtest [09:08:08]: testbed apt version: 2.9.14ubuntu1 54s autopkgtest [09:08:09]: @@@@@@@@@@@@@@@@@@@@ test bed setup 54s autopkgtest [09:08:09]: testbed release detected to be: None 54s autopkgtest [09:08:09]: updating testbed package index (apt update) 55s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 55s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 55s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 55s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 55s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 55s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [788 kB] 55s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [64.6 kB] 55s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.1 kB] 55s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [126 kB] 55s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [82.8 kB] 55s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted i386 Packages [2572 B] 55s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [40.6 kB] 55s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [690 kB] 55s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [278 kB] 55s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [21.9 kB] 55s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [6364 B] 56s Fetched 2199 kB in 1s (2489 kB/s) 56s Reading package lists... 57s Reading package lists... 57s Building dependency tree... 57s Reading state information... 57s Calculating upgrade... 57s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 57s Reading package lists... 58s Building dependency tree... 58s Reading state information... 58s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 58s autopkgtest [09:08:13]: upgrading testbed (apt dist-upgrade and autopurge) 58s Reading package lists... 58s Building dependency tree... 58s Reading state information... 58s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 59s Starting 2 pkgProblemResolver with broken count: 0 59s Done 59s Entering ResolveByKeep 59s 59s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 59s Reading package lists... 60s Building dependency tree... 60s Reading state information... 60s Starting pkgProblemResolver with broken count: 0 60s Starting 2 pkgProblemResolver with broken count: 0 60s Done 60s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 62s autopkgtest [09:08:17]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 13:41:20 UTC 2024 62s autopkgtest [09:08:17]: @@@@@@@@@@@@@@@@@@@@ apt-source glam2 64s Get:1 http://ftpmaster.internal/ubuntu plucky/universe glam2 1064-9 (dsc) [2006 B] 64s Get:2 http://ftpmaster.internal/ubuntu plucky/universe glam2 1064-9 (tar) [238 kB] 64s Get:3 http://ftpmaster.internal/ubuntu plucky/universe glam2 1064-9 (diff) [12.6 kB] 64s gpgv: Signature made Mon Dec 7 21:41:36 2020 UTC 64s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 64s gpgv: issuer "tille@debian.org" 64s gpgv: Can't check signature: No public key 64s dpkg-source: warning: cannot verify inline signature for ./glam2_1064-9.dsc: no acceptable signature found 64s autopkgtest [09:08:19]: testing package glam2 version 1064-9 65s autopkgtest [09:08:20]: build not needed 65s autopkgtest [09:08:20]: test check-no-args: preparing testbed 65s Reading package lists... 65s Building dependency tree... 65s Reading state information... 66s Starting pkgProblemResolver with broken count: 0 66s Starting 2 pkgProblemResolver with broken count: 0 66s Done 66s The following NEW packages will be installed: 66s glam2 libfftw3-double3 libgomp1 66s 0 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. 66s Need to get 1223 kB of archives. 66s After this operation, 3266 kB of additional disk space will be used. 66s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-8ubuntu1 [148 kB] 66s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libfftw3-double3 amd64 3.3.10-2fakesync1build1 [839 kB] 67s Get:3 http://ftpmaster.internal/ubuntu plucky/universe amd64 glam2 amd64 1064-9 [236 kB] 68s Fetched 1223 kB in 1s (901 kB/s) 68s Selecting previously unselected package libgomp1:amd64. 68s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75952 files and directories currently installed.) 68s Preparing to unpack .../libgomp1_14.2.0-8ubuntu1_amd64.deb ... 68s Unpacking libgomp1:amd64 (14.2.0-8ubuntu1) ... 68s Selecting previously unselected package libfftw3-double3:amd64. 68s Preparing to unpack .../libfftw3-double3_3.3.10-2fakesync1build1_amd64.deb ... 68s Unpacking libfftw3-double3:amd64 (3.3.10-2fakesync1build1) ... 68s Selecting previously unselected package glam2. 68s Preparing to unpack .../glam2_1064-9_amd64.deb ... 68s Unpacking glam2 (1064-9) ... 68s Setting up libgomp1:amd64 (14.2.0-8ubuntu1) ... 68s Setting up libfftw3-double3:amd64 (3.3.10-2fakesync1build1) ... 68s Setting up glam2 (1064-9) ... 68s Processing triggers for man-db (2.13.0-1) ... 68s Processing triggers for libc-bin (2.40-1ubuntu3) ... 69s autopkgtest [09:08:24]: test check-no-args: [----------------------- 69s Usage: glam2 [options] alphabet my_seqs.fa 69s Alphabets: p = proteins, n = nucleotides, other = alphabet file 69s Options (default settings): 69s -h: show all options and their default settings 69s -o: output file (stdout) 69s -r: number of alignment runs (10) 69s -n: end each run after this many iterations without improvement (10000) 69s -2: examine both strands - forward and reverse complement 69s -z: minimum number of sequences in the alignment (2) 69s -a: minimum number of aligned columns (2) 69s -b: maximum number of aligned columns (50) 69s -w: initial number of aligned columns (20) 69s -d: Dirichlet mixture file 69s -D: deletion pseudocount (0.1) 69s -E: no-deletion pseudocount (2.0) 69s -I: insertion pseudocount (0.02) 69s -J: no-insertion pseudocount (1.0) 69s -q: weight for generic versus sequence-set-specific residue abundances (1e+99) 69s -t: initial temperature (1.2) 69s -c: cooling factor per n iterations (1.44) 69s -u: temperature lower bound (0.1) 69s -p: print progress information at each iteration 69s -m: column-sampling moves per site-sampling move (1.0) 69s -x: site sampling algorithm: 0=FAST 1=SLOW 2=FFT (0) 69s -s: seed for pseudo-random numbers (1) 69s SUCCESS: Help text is there! 70s autopkgtest [09:08:25]: test check-no-args: -----------------------] 70s autopkgtest [09:08:25]: test check-no-args: - - - - - - - - - - results - - - - - - - - - - 70s check-no-args PASS 71s autopkgtest [09:08:26]: test run-unit-test: preparing testbed 71s Reading package lists... 71s Building dependency tree... 71s Reading state information... 71s Starting pkgProblemResolver with broken count: 0 71s Starting 2 pkgProblemResolver with broken count: 0 71s Done 71s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 72s autopkgtest [09:08:27]: test run-unit-test: [----------------------- 73s Run 1... 12350 iterations 74s Run 2... 17270 iterations 75s Run 3... 19781 iterations 75s Run 4... 12220 iterations 77s Run 5... 18950 iterations 77s Run 6... 15650 iterations 80s Run 7... 31104 iterations 81s Run 8... 21854 iterations 82s Run 9... 11813 iterations 83s Run 10... 11182 iterations 83s 83s GLAM2: Gapped Local Alignment of Motifs 83s Version 1064 83s 83s glam2 p lipocalin.s 83s Sequences: 5 83s Greatest sequence length: 189 83s Residue counts: A=65 C=26 D=62 E=70 F=39 G=52 H=23 I=43 K=78 L=79 M=16 N=48 P=29 Q=26 R=28 S=53 T=43 V=63 W=15 Y=45 x=0 83s 83s Score: 80.3660 Columns: 20 Sequences: 5 83s 83s ******************** 83s ICYA_MANSE 13 KPVNDFDLSAFAGAWHEIAK 32 + 33.3 83s LACB_BOVIN 21 QTMKGLDIQKVAGTWYSLAM 40 + 18.8 83s BBP_PIEBR 12 KPVDNFDWSNYHGKWWEVAK 31 + 27.9 83s RETB_BOVIN 10 RVKENFDKARFAGTWYAMAK 29 + 25.5 83s MUP2_MOUSE 23 STGRNFNVEKINGEWHTIIL 42 + 13.4 83s 83s KPVDNFDISKFAGTWHEIAK 83s QTGEDLNKAAIH A YALIL 83s RVKKG LENVN E WSM M 83s S MN VQRY K TV 83s R W 83s 83s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 83s 0 0 0 0 0 0 0 0 2 0 0 0 0 1 1 1 0 0 0 0 0 1.51 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 2 1 0 0 0 1.06 83s 0 -0.0655 83s 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 2 0 0 0 -2.00 83s 0 -0.0655 83s 0 0 1 1 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0.233 83s 0 -0.0655 83s 0 0 1 0 0 1 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 4.91 83s 0 -0.0655 83s 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 9.87 83s 0 -0.0655 83s 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 9.08 83s 0 -0.0655 83s 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 1 1 0 0 -1.61 83s 0 -0.0655 83s 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 -0.0557 83s 0 -0.0655 83s 1 0 0 0 0 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 0 0.836 83s 0 -0.0655 83s 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 2.40 83s 0 -0.0655 83s 3 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1.35 83s 0 -0.0655 83s 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12.9 83s 0 -0.0655 83s 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0.355 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 22.5 83s 0 -0.0655 83s 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 2 0 7.34 83s 0 -0.0655 83s 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 -0.00544 83s 0 -0.0655 83s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 83s 0 -0.0655 83s 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 5.12 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 1.70 83s 83s Score: 80.3660 Columns: 20 Sequences: 5 83s 83s ******************** 83s ICYA_MANSE 13 KPVNDFDLSAFAGAWHEIAK 32 + 33.3 83s LACB_BOVIN 21 QTMKGLDIQKVAGTWYSLAM 40 + 18.8 83s BBP_PIEBR 12 KPVDNFDWSNYHGKWWEVAK 31 + 27.9 83s RETB_BOVIN 10 RVKENFDKARFAGTWYAMAK 29 + 25.5 83s MUP2_MOUSE 23 STGRNFNVEKINGEWHTIIL 42 + 13.4 83s 83s KPVDNFDISKFAGTWHEIAK 83s QTGEDLNKAAIH A YALIL 83s RVKKG LENVN E WSM M 83s S MN VQRY K TV 83s R W 83s 83s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 83s 0 0 0 0 0 0 0 0 2 0 0 0 0 1 1 1 0 0 0 0 0 1.51 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 2 1 0 0 0 1.06 83s 0 -0.0655 83s 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 2 0 0 0 -2.00 83s 0 -0.0655 83s 0 0 1 1 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0.233 83s 0 -0.0655 83s 0 0 1 0 0 1 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 4.91 83s 0 -0.0655 83s 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 9.87 83s 0 -0.0655 83s 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 9.08 83s 0 -0.0655 83s 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 1 1 0 0 -1.61 83s 0 -0.0655 83s 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 -0.0557 83s 0 -0.0655 83s 1 0 0 0 0 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 0 0.836 83s 0 -0.0655 83s 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 2.40 83s 0 -0.0655 83s 3 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1.35 83s 0 -0.0655 83s 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12.9 83s 0 -0.0655 83s 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0.355 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 22.5 83s 0 -0.0655 83s 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 2 0 7.34 83s 0 -0.0655 83s 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 -0.00544 83s 0 -0.0655 83s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 83s 0 -0.0655 83s 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 5.12 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 1.70 83s 83s Score: 80.3660 Columns: 20 Sequences: 5 83s 83s ******************** 83s ICYA_MANSE 13 KPVNDFDLSAFAGAWHEIAK 32 + 33.3 83s LACB_BOVIN 21 QTMKGLDIQKVAGTWYSLAM 40 + 18.8 83s BBP_PIEBR 12 KPVDNFDWSNYHGKWWEVAK 31 + 27.9 83s RETB_BOVIN 10 RVKENFDKARFAGTWYAMAK 29 + 25.5 83s MUP2_MOUSE 23 STGRNFNVEKINGEWHTIIL 42 + 13.4 83s 83s KPVDNFDISKFAGTWHEIAK 83s QTGEDLNKAAIH A YALIL 83s RVKKG LENVN E WSM M 83s S MN VQRY K TV 83s R W 83s 83s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 83s 0 0 0 0 0 0 0 0 2 0 0 0 0 1 1 1 0 0 0 0 0 1.51 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 2 1 0 0 0 1.06 83s 0 -0.0655 83s 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 2 0 0 0 -2.00 83s 0 -0.0655 83s 0 0 1 1 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0.233 83s 0 -0.0655 83s 0 0 1 0 0 1 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 4.91 83s 0 -0.0655 83s 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 9.87 83s 0 -0.0655 83s 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 9.08 83s 0 -0.0655 83s 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 1 1 0 0 -1.61 83s 0 -0.0655 83s 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 -0.0557 83s 0 -0.0655 83s 1 0 0 0 0 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 0 0.836 83s 0 -0.0655 83s 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 2.40 83s 0 -0.0655 83s 3 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1.35 83s 0 -0.0655 83s 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12.9 83s 0 -0.0655 83s 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0.355 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 22.5 83s 0 -0.0655 83s 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 2 0 7.34 83s 0 -0.0655 83s 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 -0.00544 83s 0 -0.0655 83s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 83s 0 -0.0655 83s 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 5.12 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 1.70 83s 83s Score: 77.3362 Columns: 21 Sequences: 5 83s 83s ********************* 83s ICYA_MANSE 100 NLVPWVLATDYKNYAINYNCD 120 + 37.8 83s LACB_BOVIN 106 NKVL.VLDTDYKKYLLFCMEN 125 + 20.1 83s BBP_PIEBR 97 NVFN.VLSTDNKNYIIGYYCK 116 + 27.2 83s RETB_BOVIN 101 NDDHWIIDTDYETFAVQYSCR 121 + 26.7 83s MUP2_MOUSE 106 NTFT.IPKTDYDNFLMAHLIN 125 + 18.6 83s 83s NDFHWVLDTDYKNYAIAYLCN 83s KVL IIA NDKFLLFCMED 83s LDN PK ET IMGHNIK 83s T P S VN S R 83s V T Q Y 83s 83s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 83s 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 14.2 83s 0 -0.0655 83s 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 -3.28 83s 0 -0.0655 83s 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.278 83s 0 -0.0655 83s 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 -2.97 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 -4.19 83s 0 -0.0655 83s 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 3 0 0 0 8.67 83s 0 -0.0655 83s 0 0 0 0 0 0 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 1.58 83s 0 -0.0655 83s 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0.395 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 12.2 83s 0 -0.0655 83s 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13.9 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 8.89 83s 0 -0.0655 83s 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4.07 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 3.33 83s 0 -0.0655 83s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 83s 0 -0.0655 83s 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 2.04 83s 0 -0.0655 83s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 83s 0 -0.0655 83s 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 -3.34 83s 0 -0.0655 83s 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.78 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 -2.50 83s 0 -0.0655 83s 0 3 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.99 83s 0 -0.0655 83s 0 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 1.52 83s 83s Score: 77.3362 Columns: 21 Sequences: 5 83s 83s ********************* 83s ICYA_MANSE 100 NLVPWVLATDYKNYAINYNCD 120 + 37.8 83s LACB_BOVIN 106 NKVL.VLDTDYKKYLLFCMEN 125 + 20.1 83s BBP_PIEBR 97 NVFN.VLSTDNKNYIIGYYCK 116 + 27.2 83s RETB_BOVIN 101 NDDHWIIDTDYETFAVQYSCR 121 + 26.7 83s MUP2_MOUSE 106 NTFT.IPKTDYDNFLMAHLIN 125 + 18.6 83s 83s NDFHWVLDTDYKNYAIAYLCN 83s KVL IIA NDKFLLFCMED 83s LDN PK ET IMGHNIK 83s T P S VN S R 83s V T Q Y 83s 83s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 83s 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 14.2 83s 0 -0.0655 83s 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 -3.28 83s 0 -0.0655 83s 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.278 83s 0 -0.0655 83s 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 -2.97 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 -4.19 83s 0 -0.0655 83s 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 3 0 0 0 8.67 83s 0 -0.0655 83s 0 0 0 0 0 0 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 1.58 83s 0 -0.0655 83s 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0.395 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 12.2 83s 0 -0.0655 83s 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13.9 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 8.89 83s 0 -0.0655 83s 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4.07 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 3.33 83s 0 -0.0655 83s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 83s 0 -0.0655 83s 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 2.04 83s 0 -0.0655 83s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 83s 0 -0.0655 83s 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 -3.34 83s 0 -0.0655 83s 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.78 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 -2.50 83s 0 -0.0655 83s 0 3 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.99 83s 0 -0.0655 83s 0 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 1.52 83s 83s Score: 77.3362 Columns: 21 Sequences: 5 83s 83s ********************* 83s ICYA_MANSE 100 NLVPWVLATDYKNYAINYNCD 120 + 37.8 83s LACB_BOVIN 106 NKVL.VLDTDYKKYLLFCMEN 125 + 20.1 83s BBP_PIEBR 97 NVFN.VLSTDNKNYIIGYYCK 116 + 27.2 83s RETB_BOVIN 101 NDDHWIIDTDYETFAVQYSCR 121 + 26.7 83s MUP2_MOUSE 106 NTFT.IPKTDYDNFLMAHLIN 125 + 18.6 83s 83s NDFHWVLDTDYKNYAIAYLCN 83s KVL IIA NDKFLLFCMED 83s LDN PK ET IMGHNIK 83s T P S VN S R 83s V T Q Y 83s 83s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 83s 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 14.2 83s 0 -0.0655 83s 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 -3.28 83s 0 -0.0655 83s 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.278 83s 0 -0.0655 83s 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 -2.97 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 -4.19 83s 0 -0.0655 83s 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 3 0 0 0 8.67 83s 0 -0.0655 83s 0 0 0 0 0 0 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 1.58 83s 0 -0.0655 83s 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0.395 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 12.2 83s 0 -0.0655 83s 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13.9 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 8.89 83s 0 -0.0655 83s 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4.07 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 3.33 83s 0 -0.0655 83s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 83s 0 -0.0655 83s 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 2.04 83s 0 -0.0655 83s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 83s 0 -0.0655 83s 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 -3.34 83s 0 -0.0655 83s 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.78 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 -2.50 83s 0 -0.0655 83s 0 3 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.99 83s 0 -0.0655 83s 0 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 1.52 83s 83s Score: 77.3362 Columns: 21 Sequences: 5 83s 83s ********************* 83s ICYA_MANSE 100 NLVPWVLATDYKNYAINYNCD 120 + 37.8 83s LACB_BOVIN 106 NKVL.VLDTDYKKYLLFCMEN 125 + 20.1 83s BBP_PIEBR 97 NVFN.VLSTDNKNYIIGYYCK 116 + 27.2 83s RETB_BOVIN 101 NDDHWIIDTDYETFAVQYSCR 121 + 26.7 83s MUP2_MOUSE 106 NTFT.IPKTDYDNFLMAHLIN 125 + 18.6 83s 83s NDFHWVLDTDYKNYAIAYLCN 83s KVL IIA NDKFLLFCMED 83s LDN PK ET IMGHNIK 83s T P S VN S R 83s V T Q Y 83s 83s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 83s 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 14.2 83s 0 -0.0655 83s 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 -3.28 83s 0 -0.0655 83s 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.278 83s 0 -0.0655 83s 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 -2.97 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 -4.19 83s 0 -0.0655 83s 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 3 0 0 0 8.67 83s 0 -0.0655 83s 0 0 0 0 0 0 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 1.58 83s 0 -0.0655 83s 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0.395 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 12.2 83s 0 -0.0655 83s 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13.9 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 8.89 83s 0 -0.0655 83s 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4.07 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 3.33 83s 0 -0.0655 83s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 83s 0 -0.0655 83s 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 2.04 83s 0 -0.0655 83s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 83s 0 -0.0655 83s 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 -3.34 83s 0 -0.0655 83s 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.78 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 -2.50 83s 0 -0.0655 83s 0 3 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.99 83s 0 -0.0655 83s 0 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 1.52 83s 83s Score: 75.7471 Columns: 26 Sequences: 5 83s 83s ************************** 83s ICYA_MANSE 100 NLVPWVLATDYKNYAINYNCDYHPDK 125 + 40.6 83s LACB_BOVIN 106 NKVL.VLDTDYKKYLLFCMENSAEPE 130 + 20.6 83s BBP_PIEBR 97 NVFN.VLSTDNKNYIIGYYCKYDEDK 121 + 32.0 83s RETB_BOVIN 101 NDDHWIIDTDYETFAVQYSCRLLNLD 126 + 20.6 83s MUP2_MOUSE 106 NTFT.IPKTDYDNFLMAHLINEKDGE 130 + 18.1 83s 83s NDFHWVLDTDYKNYAIAYLCNYAEDE 83s KVL IIA NDKFLLFCMEDEDDGK 83s LDN PK ET IMGHNIKLHNLD 83s T P S VN S RSKPP 83s V T Q Y L 83s 83s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 83s 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 14.2 83s 0 -0.0655 83s 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 -3.28 83s 0 -0.0655 83s 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.278 83s 0 -0.0655 83s 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 -2.97 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 -4.19 83s 0 -0.0655 83s 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 3 0 0 0 8.67 83s 0 -0.0655 83s 0 0 0 0 0 0 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 1.58 83s 0 -0.0655 83s 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0.395 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 12.2 83s 0 -0.0655 83s 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13.9 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 8.89 83s 0 -0.0655 83s 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4.07 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 3.33 83s 0 -0.0655 83s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 83s 0 -0.0655 83s 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 2.04 83s 0 -0.0655 83s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 83s 0 -0.0655 83s 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 -3.34 83s 0 -0.0655 83s 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.78 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 -2.50 83s 0 -0.0655 83s 0 3 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.99 83s 0 -0.0655 83s 0 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 1.52 83s 0 -0.0655 83s 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 2 0 -0.975 83s 0 -0.0655 83s 1 0 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 -2.88 83s 0 -0.0655 83s 0 0 1 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1.18 83s 0 -0.0655 83s 0 0 2 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 -2.32 83s 0 -0.0655 83s 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 3.72 83s 83s Score: 75.7471 Columns: 26 Sequences: 5 83s 83s ************************** 83s ICYA_MANSE 100 NLVPWVLATDYKNYAINYNCDYHPDK 125 + 40.6 83s LACB_BOVIN 106 NKVL.VLDTDYKKYLLFCMENSAEPE 130 + 20.6 83s BBP_PIEBR 97 NVFN.VLSTDNKNYIIGYYCKYDEDK 121 + 32.0 83s RETB_BOVIN 101 NDDHWIIDTDYETFAVQYSCRLLNLD 126 + 20.6 83s MUP2_MOUSE 106 NTFT.IPKTDYDNFLMAHLINEKDGE 130 + 18.1 83s 83s NDFHWVLDTDYKNYAIAYLCNYAEDE 83s KVL IIA NDKFLLFCMEDEDDGK 83s LDN PK ET IMGHNIKLHNLD 83s T P S VN S RSKPP 83s V T Q Y L 83s 83s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 83s 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 14.2 83s 0 -0.0655 83s 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 -3.28 83s 0 -0.0655 83s 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.278 83s 0 -0.0655 83s 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 -2.97 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 -4.19 83s 0 -0.0655 83s 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 3 0 0 0 8.67 83s 0 -0.0655 83s 0 0 0 0 0 0 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 1.58 83s 0 -0.0655 83s 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0.395 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 12.2 83s 0 -0.0655 83s 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13.9 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 8.89 83s 0 -0.0655 83s 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4.07 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 3.33 83s 0 -0.0655 83s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 83s 0 -0.0655 83s 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 2.04 83s 0 -0.0655 83s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 83s 0 -0.0655 83s 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 -3.34 83s 0 -0.0655 83s 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.78 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 -2.50 83s 0 -0.0655 83s 0 3 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.99 83s 0 -0.0655 83s 0 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 1.52 83s 0 -0.0655 83s 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 2 0 -0.975 83s 0 -0.0655 83s 1 0 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 -2.88 83s 0 -0.0655 83s 0 0 1 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1.18 83s 0 -0.0655 83s 0 0 2 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 -2.32 83s 0 -0.0655 83s 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 3.72 83s 83s Score: 73.5314 Columns: 41 Sequences: 5 83s 83s ********.*******.......************************** 83s ICYA_MANSE 81 KYTKQGKY.VMTFK.FGQRVV..NLVPWVLATDYKNYAINYNCDYHPDK 125 + 38.9 83s LACB_BOVIN 91 KTKIPAVF.KIDALNE.......NKVL.VLDTDYKKYLLFCMENSAEPE 130 + 21.8 83s BBP_PIEBR 78 DSKIGKIYHKLTYGGVTKE....NVFN.VLSTDNKNYIIGYYCKYDEDK 121 + 32.8 83s RETB_BOVIN 79 DTEDPAKF.KMKYWGVASFLQKGNDDHWIIDTDYETFAVQYSCRLLNLD 126 + 34.1 83s MUP2_MOUSE 91 KTEKAGEY.SVTYDGF.......NTFT.IPKTDYDNFLMAHLINEKDGE 130 + 33.6 83s 83s KTEIPAKY KMTYDGF NDFHWVLDTDYKNYAIAYLCNYAEDE 83s DSKKAGEF SIDAGNV KVL IIA NDKFLLFCMEDEDDGK 83s YTDGKI VLKFK E LDN PK ET IMGHNIKLHNLD 83s Q V V L T P S VN S RSKPP 83s W V T Q Y L 83s 83s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 83s 0 0 2 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 5.22 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 1 0 2.46 83s 0 -0.0655 83s 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 2.94 83s 0 -0.0655 83s 0 0 1 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0.216 83s 0 -0.0655 83s 1 0 0 0 0 1 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 -1.06 83s 0 -0.0655 83s 2 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0.824 83s 0 -0.0655 83s 0 0 0 1 0 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 0 -0.808 83s 0 -0.0655 83s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 83s 1 -8.30 83s 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 1 0 1 0 0 0 1.49 83s 0 -0.0655 83s 0 0 0 0 0 0 0 1 0 1 2 0 0 0 0 0 0 1 0 0 0 4.57 83s 0 -0.0655 83s 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 3 0 0 0 0 2.41 83s 0 -0.0655 83s 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.65 83s 0 -0.0655 83s 0 0 1 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 -4.16 83s 0 -0.0655 83s 0 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 -1.19 83s 0 -0.0655 83s 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.743 83s 15 -23.5 83s 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 14.2 83s 0 -0.0655 83s 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 -3.28 83s 0 -0.0655 83s 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.278 83s 0 -0.0655 83s 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 -2.97 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 -4.19 83s 0 -0.0655 83s 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 3 0 0 0 8.67 83s 0 -0.0655 83s 0 0 0 0 0 0 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 1.58 83s 0 -0.0655 83s 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0.395 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 12.2 83s 0 -0.0655 83s 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13.9 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 8.89 83s 0 -0.0655 83s 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4.07 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 3.33 83s 0 -0.0655 83s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 83s 0 -0.0655 83s 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 2.04 83s 0 -0.0655 83s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 83s 0 -0.0655 83s 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 -3.34 83s 0 -0.0655 83s 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.78 83s 0 -0.0655 83s 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 -2.50 83s 0 -0.0655 83s 0 3 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.99 83s 0 -0.0655 83s 0 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 1.52 83s 0 -0.0655 83s 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 2 0 -0.975 83s 0 -0.0655 83s 1 0 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 -2.88 83s 0 -0.0655 83s 0 0 1 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1.18 83s 0 -0.0655 83s 0 0 2 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 -2.32 83s 0 -0.0655 83s 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 3.72 83s 83s Run 1... 4122 iterations 83s 83s GLAM2: Gapped Local Alignment of Motifs 83s Version 1064 83s 83s glam2 -r 1 -n 1000 p crp0.s 83s Sequences: 18 83s Greatest sequence length: 105 83s Residue counts: A=572 C=345 D=0 E=0 F=0 G=395 H=0 I=0 K=0 L=0 M=0 N=0 P=0 Q=0 R=0 S=0 T=578 V=0 W=0 Y=0 x=0 83s 83s Score: 1431.87 Columns: 46 Sequences: 18 83s 83s *********.......*****.................********...............********........***.........****..********* 83s ce1cg 31 GCGAGAATAG......CGCGTGGTG.............TGAAAGACTGTTTTTTTGATCGTTTTCACAAAAA.....TGGAA.......GTCC..ACAGTCTTG 101 + 95.1 83s ara 31 TCACGGCAGAAAAGTCCACATTGATTATT.........TGCACGGCG..............TCACACTT........TGCTA.......TGCC..ATAGCATTT 94 + 114. 83s bglr1 37 ATATAACTTTATAAA.TTCCTAAAAT............TACACAAA...............GTTAATAAC.......TGTG........AGCAT.GGTCATATT 96 + 99.8 83s crp 46 ACATTGATG.......TACTGCATG.............TATGCAAAGGACG..........TCACATTACCG.....TGCAG.......TACA..GTTGATAGC 105 + 109. 83s cya 1 ACGGTGCTA.......CACTTG................TATGTAGCGCATC..........TTTCTTTACGG.....TCA.........ATCA..GCAAGGTGT 55 + 109. 83s deop2 18 AGATCGCAT.......TACAGTGATGCAAACTTG....TAAGTAGA...............TTTCCTTAAT......TGTGATGTG...TATC..GAAGTGTGT 84 + 105. 83s gale 10 AAACGGCTAAA.....TTCTTG................TGTAAACGA..............TTCCACTAATTTAT..TCCA........TGTC..ACACTTTTC 66 + 117. 83s ilv 21 TATCTGCAA.......TTCAG.................TACAAAACGTGATCA........ACCCCTCAATTT....TCCCTT......TGCT..GAAAAATTT 80 + 112. 83s lac 16 AGTTAGCTCA......CTCAT.................TAGGCACCCCAGGCT........TTACACTTTA......TGC.........TTCCG.GCTCGTATG 72 + 111. 83s male 4 TTACCGCCAA......TTCTG.................TAACAGAGA..............TCACACAAAGCGACGGTGGGGCGTAGG.GGCAA.GGAGGATGG 68 + 95.1 83s malk 22 ACACGGCTT.......CTGTGAACTAAACCGAGGTCA.TGTAAGGAA..............TTTCGTGA........TGT.........TGCTT.GCAAAAATC 85 + 109. 83s malt 50 ACAGTGCAAA......TTCAGACACA............TAAAAAAAC..............GTCATCGCT.......TGC.........ATTA..GAAAGGTTT 103 + 107. 83s ompa 30 ACAAGACTTTTTT...TTCATA................TGCCTGACGGA............GTTCACACT.......TGTAAGTT....TTCA..ACTACGTTG 89 + 113. 83s tnaa 9 ACATTAAAA.......TTCTTACGTAATTTATAATCTTTAAAAAAAGCA............TTTAATAT........TGC.........TCCCC.GAACGATTG 75 + 109. 83s uxu1 32 AACCCAATTAGAA...TTCGGGATTGACATGTCT....TACCAAAAGGTAGAACTT.....ATACGCCA........TCTC........ATCC..GATGCAAGC 105 + 101. 83s pbr322 12 ATGCGGCAT.......CAGAGCAGATTG..........TACTGAGA...............GTGCACCATA......TGCGGTGTGAAATACC..GCACAGATG 75 + 108. 83s trn9cat 11 AGATCACTT.......CGCAGAA...............TAAATAAATCCTGGT........GTCCCTGT........TGA.........TACCGGGAAGCCCTG 67 + 107. 83s tdc 47 ATAACGATA.......CTCTGGAAAG............TATTGAAA...............GTTAATTTG.......TGAGT.......GGTC..GCACATATC 100 + 107. 83s 83s ACACGGCTA TTCAG TAAAAAAA TTTCACTA TGC TGCC GCAGAATTG 83s T TCAAAT CA TT GCGCGGC GCAA TAT CT ATTA AATCGGAGT 83s T T T C A ACT C 83s 83s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 83s 14 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 37.3 83s 0 -0.100 83s 3 8 0 0 0 3 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 32.9 83s 0 -0.100 83s 12 1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 29.5 83s 0 -0.100 83s 3 7 0 0 0 2 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 31.9 83s 0 -0.100 83s 2 5 0 0 0 6 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 26.4 83s 0 -0.100 83s 6 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40.1 83s 0 -0.100 83s 5 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 62.9 83s 0 -0.100 83s 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 34.9 83s 0 -0.100 83s 8 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 26.2 83s 27 -51.1 83s 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 52.5 83s 0 -0.100 83s 5 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 32.4 83s 0 -0.100 83s 0 16 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 75.8 83s 0 -0.100 83s 8 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 26.2 83s 0 -0.100 83s 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 38.4 83s 102 -82.2 83s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 64.5 83s 0 -0.100 83s 13 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39.7 83s 0 -0.100 83s 6 6 0 0 0 1 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 31.2 83s 0 -0.100 83s 9 3 0 0 0 4 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 26.2 83s 0 -0.100 83s 8 4 0 0 0 2 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 26.9 83s 0 -0.100 83s 13 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39.7 83s 0 -0.100 83s 11 2 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33.5 83s 0 -0.100 83s 10 6 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39.7 83s 67 -71.8 83s 2 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 30.8 83s 0 -0.100 83s 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 49.3 83s 0 -0.100 83s 5 4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 29.1 83s 0 -0.100 83s 4 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 66.8 83s 0 -0.100 83s 11 3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 29.8 83s 0 -0.100 83s 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 54.3 83s 0 -0.100 83s 5 3 0 0 0 3 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 24.3 83s 0 -0.100 83s 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 33.0 83s 37 -57.9 83s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 64.5 83s 0 -0.100 83s 0 4 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47.7 83s 0 -0.100 83s 3 8 0 0 0 2 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 34.0 83s 42 -60.8 83s 4 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 31.4 83s 0 -0.100 83s 4 1 0 0 0 7 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 22.9 83s 0 -0.100 83s 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 68.5 83s 0 -0.100 83s 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 45.9 83s 7 -27.4 83s 4 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43.6 83s 0 -0.100 83s 6 8 0 0 0 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 35.2 83s 0 -0.100 83s 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 39.1 83s 0 -0.100 83s 5 6 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35.3 83s 0 -0.100 83s 6 4 0 0 0 5 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 24.4 83s 0 -0.100 83s 6 2 0 0 0 5 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 22.2 83s 0 -0.100 83s 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 33.9 83s 0 -0.100 83s 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 40.8 83s 0 -0.100 83s 0 5 0 0 0 7 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 31.3 83s 83s PASS 83s autopkgtest [09:08:38]: test run-unit-test: -----------------------] 84s autopkgtest [09:08:39]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 84s run-unit-test PASS 84s autopkgtest [09:08:39]: @@@@@@@@@@@@@@@@@@@@ summary 84s check-no-args PASS 84s run-unit-test PASS 104s nova [W] Skipping flock for amd64 104s Creating nova instance adt-plucky-amd64-glam2-20241130-090715-juju-7f2275-prod-proposed-migration-environment-15-cf093952-cb87-4206-8dc1-4dbe7f0368dd from image adt/ubuntu-plucky-amd64-server-20241129.img (UUID c95ff410-802a-49bb-8eba-55253ddf6f2e)...