0s autopkgtest [13:20:46]: starting date and time: 2025-01-11 13:20:46+0000 0s autopkgtest [13:20:46]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [13:20:46]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.zybc613r/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:dials --apt-upgrade dials --timeout-short=300 --timeout-copy=20000 --timeout-test=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=dials/3.22.1+dfsg3-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu4-ram8-disk100 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-7.secgroup --name adt-plucky-amd64-dials-20250111-132046-juju-7f2275-prod-proposed-migration-environment-2-41b69e62-837c-4886-96ad-70aee82e5e23 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 56s autopkgtest [13:21:42]: testbed dpkg architecture: amd64 56s autopkgtest [13:21:42]: testbed apt version: 2.9.18 56s autopkgtest [13:21:42]: @@@@@@@@@@@@@@@@@@@@ test bed setup 56s autopkgtest [13:21:42]: testbed release detected to be: None 57s autopkgtest [13:21:43]: updating testbed package index (apt update) 58s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 58s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 58s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 58s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 58s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [778 kB] 58s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [13.7 kB] 58s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [131 kB] 58s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 58s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [164 kB] 58s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [296 kB] 58s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [40.1 kB] 58s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/restricted i386 Packages [2408 B] 58s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [979 kB] 58s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [380 kB] 58s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [3516 B] 58s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [13.0 kB] 58s Fetched 2884 kB in 1s (2936 kB/s) 59s Reading package lists... 60s + lsb_release --codename --short 60s + RELEASE=plucky 60s + cat 60s + [ plucky != trusty ] 60s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 60s Reading package lists... 60s Building dependency tree... 60s Reading state information... 61s Calculating upgrade... 61s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 61s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 61s + /usr/lib/apt/apt-helper analyze-pattern ?true 61s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove ?obsolete 61s Reading package lists... 61s Building dependency tree... 61s Reading state information... 61s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 61s + grep -q trusty /etc/lsb-release 61s + [ ! -d /usr/share/doc/unattended-upgrades ] 61s + [ ! -d /usr/share/doc/lxd ] 61s + [ ! -d /usr/share/doc/lxd-client ] 61s + [ ! -d /usr/share/doc/snapd ] 61s + type iptables 61s + cat 61s + chmod 755 /etc/rc.local 61s + . /etc/rc.local 61s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 61s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 61s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 61s + uname -m 61s + [ x86_64 = ppc64le ] 61s + [ -d /run/systemd/system ] 61s + systemd-detect-virt --quiet --vm 61s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 61s + cat 61s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 61s + echo COMPRESS=lz4 61s autopkgtest [13:21:47]: upgrading testbed (apt dist-upgrade and autopurge) 62s Reading package lists... 62s Building dependency tree... 62s Reading state information... 62s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 62s Starting 2 pkgProblemResolver with broken count: 0 62s Done 63s Entering ResolveByKeep 63s 63s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 63s Reading package lists... 63s Building dependency tree... 63s Reading state information... 64s Starting pkgProblemResolver with broken count: 0 64s Starting 2 pkgProblemResolver with broken count: 0 64s Done 64s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 67s autopkgtest [13:21:53]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 13:41:20 UTC 2024 67s autopkgtest [13:21:53]: @@@@@@@@@@@@@@@@@@@@ apt-source dials 69s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/universe dials 3.22.1+dfsg3-1 (dsc) [2713 B] 69s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe dials 3.22.1+dfsg3-1 (tar) [8378 kB] 69s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe dials 3.22.1+dfsg3-1 (diff) [13.5 kB] 70s gpgv: Signature made Wed Nov 13 11:42:44 2024 UTC 70s gpgv: using RSA key B415360F591EB6DD73AFFB83D30DECD2599322FC 70s gpgv: Can't check signature: No public key 70s dpkg-source: warning: cannot verify inline signature for ./dials_3.22.1+dfsg3-1.dsc: no acceptable signature found 70s autopkgtest [13:21:56]: testing package dials version 3.22.1+dfsg3-1 71s autopkgtest [13:21:57]: build not needed 72s autopkgtest [13:21:58]: test command1: preparing testbed 72s Reading package lists... 72s Building dependency tree... 72s Reading state information... 73s Starting pkgProblemResolver with broken count: 0 73s Starting 2 pkgProblemResolver with broken count: 0 73s Done 73s The following NEW packages will be installed: 73s adwaita-icon-theme at-spi2-common blt clang-17 dconf-gsettings-backend 73s dconf-service dials fontconfig fontconfig-config fonts-dejavu-core 73s fonts-dejavu-mono fonts-font-awesome fonts-glyphicons-halflings fonts-katex 73s fonts-lato fonts-lyx fonts-mathjax gdb gtk-update-icon-cache 73s hicolor-icon-theme humanity-icon-theme libaec0 libann-cctbx-dev 73s libann-cctbx0 libantlr3c-3.4-0 libasan8 libasyncns0 libatk-bridge2.0-0t64 73s libatk1.0-0t64 libatspi2.0-0t64 libavahi-client3 libavahi-common-data 73s libavahi-common3 libbabeltrace1 libblas3 libboost-numpy1.83.0 73s libboost-python-dev libboost-python1.83-dev libboost-python1.83.0 73s libboost-thread1.83.0 libboost-timer1.83.0 libboost1.83-dev 73s libcairo-gobject2 libcairo2 libcbf1t64 libccp4-data libccp4-dev libccp4c0t64 73s libccp4f0t64 libcctbx-dev libcctbx0 libclang-common-17-dev libclang-cpp17t64 73s libclang1-17t64 libcolord2 libcups2t64 libdatrie1 libdconf1 73s libdebuginfod-common libdebuginfod1t64 libdeflate0 libdouble-conversion3 73s libdrm-intel1 libdrm-radeon1 libegl-mesa0 libegl1 libepoxy0 libexpat1-dev 73s libflac12t64 libfontconfig1 libgbm1 libgc1 libgcc-14-dev libgdk-pixbuf-2.0-0 73s libgdk-pixbuf2.0-common libgfortran5 libgl1 libgl1-mesa-dri libglapi-mesa 73s libglew2.2 libglu1-mesa libglvnd0 libglx-mesa0 libglx0 libgomp1 73s libgraphite2-3 libgstreamer-plugins-base1.0-0 libgstreamer1.0-0 73s libgtk-3-0t64 libgtk-3-common libharfbuzz0b libhdf5-103-1t64 73s libhdf5-hl-100t64 libhwasan0 libhwloc15 libhyphen0 libice6 libimagequant0 73s libinput-bin libinput10 libipt2 libitm1 libjbig0 libjpeg-turbo8 libjpeg8 73s libjs-bootstrap libjs-jquery libjs-jquery-ui libjs-katex libjs-mathjax 73s libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 liblcms2-2 liblerc4 73s libllvm17t64 liblsan0 liblzf1 libmd4c0 libmmdb2-0 libmp3lame0 libmpg123-0t64 73s libmtdev1t64 libnetcdf19t64 libnorm1t64 libnotify4 libobjc-14-dev libobjc4 73s libogg0 libopengl0 libopenjp2-7 libopus0 liborc-0.4-0t64 libpango-1.0-0 73s libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0 libpcre2-16-0 73s libpcre2-32-0 libpgm-5.3-0t64 libpixman-1-0 libpocl2-common libpocl2t64 73s libpulse0 libpython3-dev libpython3.12-dev libpython3.13-minimal 73s libpython3.13-stdlib libqhull-r8.0 libqt5charts5 libqt5core5t64 73s libqt5dbus5t64 libqt5designer5 libqt5gui5t64 libqt5help5 libqt5location5 73s libqt5multimedia5 libqt5multimediawidgets5 libqt5network5t64 73s libqt5opengl5t64 libqt5positioning5 libqt5positioningquick5 73s libqt5printsupport5t64 libqt5qml5 libqt5qmlmodels5 libqt5quick5 73s libqt5quickwidgets5 libqt5remoteobjects5 libqt5sensors5 libqt5serialport5 73s libqt5sql5t64 libqt5svg5 libqt5test5t64 libqt5texttospeech5 73s libqt5webchannel5 libqt5webkit5 libqt5websockets5 libqt5widgets5t64 73s libqt5xml5t64 libqt5xmlpatterns5 libquadmath0 libraqm0 libsharpyuv0 libsm6 73s libsndfile1 libsodium23 libsource-highlight-common libsource-highlight4t64 73s libssm2 libstdc++-14-dev libsz2 libtcl8.6 libthai-data libthai0 libtiff6 73s libtk8.6 libtsan2 libubsan1 libvorbis0a libvorbisenc2 libvulkan1 73s libwacom-common libwacom9 libwayland-client0 libwayland-cursor0 73s libwayland-egl1 libwayland-server0 libwebp7 libwebpdemux2 libwebpmux3 73s libwoff1 libwxbase3.2-1t64 libwxgtk-gl3.2-1t64 libwxgtk3.2-1t64 libx11-xcb1 73s libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 73s libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0 73s libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 73s libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcomposite1 73s libxcursor1 libxdamage1 libxfixes3 libxft2 libxi6 libxinerama1 73s libxkbcommon-x11-0 libxrandr2 libxrender1 libxshmfence1 libxslt1.1 libxss1 73s libxtst6 libxxf86vm1 libzmq5 llvm-17-linker-tools mesa-libgallium 73s ocl-icd-libopencl1 pocl-opencl-icd pymol-data python-matplotlib-data 73s python3-all python3-asttokens python3-brotli python3-cctbx python3-comm 73s python3-contourpy python3-coverage python3-cycler python3-dateutil 73s python3-debugpy python3-decorator python3-dev python3-dials 73s python3-dials-data python3-execnet python3-executing python3-fabio 73s python3-fastjsonschema python3-fonttools python3-fs python3-h5py 73s python3-h5py-serial python3-hdf5plugin python3-importlib-resources 73s python3-iniconfig python3-ipykernel python3-ipython python3-jedi 73s python3-joblib python3-jupyter-client python3-jupyter-core 73s python3-kiwisolver python3-legacy-cgi python3-lxml python3-lz4 python3-mako 73s python3-matplotlib python3-matplotlib-inline python3-mpmath python3-mrcfile 73s python3-natsort python3-nbformat python3-nest-asyncio python3-numexpr 73s python3-numpy python3-nxmx python3-opengl python3-ordered-set 73s python3-packaging python3-pandas python3-pandas-lib python3-parso 73s python3-pexpect python3-pil python3-pil.imagetk python3-pint 73s python3-platformdirs python3-plotly python3-pluggy python3-pooch 73s python3-procrunner python3-prompt-toolkit python3-psutil python3-ptyprocess 73s python3-pure-eval python3-pycbf python3-pyfai python3-pymol python3-pyopencl 73s python3-pyqt5 python3-pyqt5.qtchart python3-pyqt5.qtmultimedia 73s python3-pyqt5.qtopengl python3-pyqt5.qtpositioning python3-pyqt5.qtquick 73s python3-pyqt5.qtremoteobjects python3-pyqt5.qtsensors 73s python3-pyqt5.qtserialport python3-pyqt5.qtsql python3-pyqt5.qtsvg 73s python3-pyqt5.qttexttospeech python3-pyqt5.qtwebchannel 73s python3-pyqt5.qtwebkit python3-pyqt5.qtwebsockets 73s python3-pyqt5.qtxmlpatterns python3-pyqt5.sip python3-pytest 73s python3-pytest-mock python3-pytest-xdist python3-pytools python3-qtconsole 73s python3-qtpy python3-scipy python3-silx python3-six python3-sklearn 73s python3-sklearn-lib python3-stack-data python3-sympy python3-tabulate 73s python3-tenacity python3-threadpoolctl python3-tk python3-tornado 73s python3-tqdm python3-traitlets python3-typeshed python3-tz python3-ufolib2 73s python3-unicodedata2 python3-wcwidth python3-wxgtk4.0 python3-zmq 73s python3.12-dev python3.12-tk python3.13 python3.13-minimal python3.13-tk 73s sphinx-rtd-theme-common tk8.6-blt2.5 ubuntu-mono unicode-data x11-common 73s zlib1g-dev 73s 0 upgraded, 380 newly installed, 0 to remove and 0 not upgraded. 73s Need to get 367 MB of archives. 73s After this operation, 2063 MB of additional disk space will be used. 73s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-lato all 2.015-1 [2781 kB] 74s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod-common all 0.192-4 [15.4 kB] 74s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libgstreamer1.0-0 amd64 1.24.10-2 [1199 kB] 74s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 liborc-0.4-0t64 amd64 1:0.4.40-1 [205 kB] 74s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libgstreamer-plugins-base1.0-0 amd64 1.24.10-1 [1028 kB] 74s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libhyphen0 amd64 2.8.8-7build3 [26.5 kB] 74s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 74s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 74s Get:9 http://ftpmaster.internal/ubuntu plucky/universe amd64 libdouble-conversion3 amd64 3.3.0-1build1 [40.3 kB] 74s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-16-0 amd64 10.42-4ubuntu3 [214 kB] 74s Get:11 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5core5t64 amd64 5.15.15+dfsg-1ubuntu1 [2036 kB] 74s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 74s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 74s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB] 74s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB] 74s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB] 74s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libglvnd0 amd64 1.7.0-1build1 [69.6 kB] 74s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 libwayland-server0 amd64 1.23.0-1 [35.1 kB] 74s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-randr0 amd64 1.17.0-2 [17.9 kB] 74s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libpciaccess0 amd64 0.17-3build1 [18.6 kB] 74s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libdrm-intel1 amd64 2.4.123-1 [68.8 kB] 74s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libdrm-radeon1 amd64 2.4.123-1 [25.3 kB] 74s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libglapi-mesa amd64 24.2.8-1ubuntu1 [42.5 kB] 74s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libx11-xcb1 amd64 2:1.8.10-2 [7944 B] 74s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-dri2-0 amd64 1.17.0-2 [7222 B] 74s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-dri3-0 amd64 1.17.0-2 [7508 B] 74s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-present0 amd64 1.17.0-2 [6064 B] 74s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-sync1 amd64 1.17.0-2 [9312 B] 74s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-xfixes0 amd64 1.17.0-2 [10.2 kB] 74s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 libxshmfence1 amd64 1.3-1build5 [4764 B] 74s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 mesa-libgallium amd64 24.2.8-1ubuntu1 [11.5 MB] 75s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libgbm1 amd64 24.2.8-1ubuntu1 [32.2 kB] 75s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libwayland-client0 amd64 1.23.0-1 [27.1 kB] 75s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 75s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libegl-mesa0 amd64 24.2.8-1ubuntu1 [145 kB] 75s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libegl1 amd64 1.7.0-1build1 [28.7 kB] 75s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-glx0 amd64 1.17.0-2 [24.8 kB] 75s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libxfixes3 amd64 1:6.0.0-2build1 [10.8 kB] 75s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libxxf86vm1 amd64 1:1.1.4-1build4 [9282 B] 75s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libvulkan1 amd64 1.3.296.0-1 [143 kB] 75s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libgl1-mesa-dri amd64 24.2.8-1ubuntu1 [34.7 kB] 75s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libglx-mesa0 amd64 24.2.8-1ubuntu1 [162 kB] 75s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libglx0 amd64 1.7.0-1build1 [38.6 kB] 75s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libgl1 amd64 1.7.0-1build1 [102 kB] 75s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 75s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.1.0-1 [541 kB] 75s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 75s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 75s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 libmtdev1t64 amd64 1.1.6-1.2 [14.4 kB] 75s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 libwacom-common all 2.13.0-1 [98.6 kB] 75s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libwacom9 amd64 2.13.0-1 [25.1 kB] 75s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libinput-bin amd64 1.26.2-1 [22.8 kB] 75s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 libinput10 amd64 1.26.2-1 [137 kB] 75s Get:54 http://ftpmaster.internal/ubuntu plucky/universe amd64 libmd4c0 amd64 0.5.2-2 [50.1 kB] 75s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5dbus5t64 amd64 5.15.15+dfsg-1ubuntu1 [221 kB] 75s Get:56 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5network5t64 amd64 5.15.15+dfsg-1ubuntu1 [724 kB] 75s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB] 75s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-icccm4 amd64 0.4.2-1 [11.1 kB] 75s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-util1 amd64 0.4.0-1build3 [10.7 kB] 75s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-image0 amd64 0.4.0-2build1 [10.8 kB] 75s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-keysyms1 amd64 0.4.0-1build4 [7956 B] 75s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 75s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render-util0 amd64 0.3.9-1build4 [9608 B] 75s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shape0 amd64 1.17.0-2 [6092 B] 75s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-xinerama0 amd64 1.17.0-2 [5412 B] 75s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-xinput0 amd64 1.17.0-2 [33.2 kB] 75s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-xkb1 amd64 1.17.0-2 [32.3 kB] 75s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 libxkbcommon-x11-0 amd64 1.7.0-2 [15.2 kB] 75s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 75s Get:70 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5gui5t64 amd64 5.15.15+dfsg-1ubuntu1 [3791 kB] 75s Get:71 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5positioning5 amd64 5.15.15+dfsg-3 [223 kB] 75s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 libavahi-common-data amd64 0.8-14ubuntu1 [30.5 kB] 75s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libavahi-common3 amd64 0.8-14ubuntu1 [23.3 kB] 75s Get:74 http://ftpmaster.internal/ubuntu plucky/main amd64 libavahi-client3 amd64 0.8-14ubuntu1 [27.5 kB] 75s Get:75 http://ftpmaster.internal/ubuntu plucky/main amd64 libcups2t64 amd64 2.4.11-0ubuntu2 [292 kB] 75s Get:76 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5widgets5t64 amd64 5.15.15+dfsg-1ubuntu1 [2561 kB] 75s Get:77 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5printsupport5t64 amd64 5.15.15+dfsg-1ubuntu1 [208 kB] 75s Get:78 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5qml5 amd64 5.15.15+dfsg-3 [1618 kB] 75s Get:79 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5qmlmodels5 amd64 5.15.15+dfsg-3 [226 kB] 75s Get:80 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5quick5 amd64 5.15.15+dfsg-3 [1880 kB] 75s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5sensors5 amd64 5.15.15-2 [128 kB] 75s Get:82 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5webchannel5 amd64 5.15.15-2 [66.2 kB] 75s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [17.5 kB] 75s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.4.0-0.1 [231 kB] 75s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libwoff1 amd64 1.0.2-2build1 [45.3 kB] 75s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 libxslt1.1 amd64 1.1.39-0exp1ubuntu2 [175 kB] 75s Get:87 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5webkit5 amd64 5.212.0~alpha4-41 [14.7 MB] 76s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.1-2 [881 kB] 76s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.1-2 [2358 kB] 76s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [7888 B] 76s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.22-1 [64.5 kB] 76s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 76s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 76s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 76s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 libgdk-pixbuf-2.0-0 amd64 2.42.12+dfsg-1 [147 kB] 76s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 gtk-update-icon-cache amd64 4.17.1+ds-2 [52.8 kB] 76s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 hicolor-icon-theme all 0.18-1 [13.5 kB] 76s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 humanity-icon-theme all 0.6.16 [1282 kB] 76s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 ubuntu-mono all 24.04-0ubuntu1 [151 kB] 76s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 adwaita-icon-theme all 47.0-2 [525 kB] 76s Get:101 http://ftpmaster.internal/ubuntu plucky/main amd64 at-spi2-common all 2.54.0-1 [8774 B] 76s Get:102 http://ftpmaster.internal/ubuntu plucky/main amd64 libtcl8.6 amd64 8.6.15+dfsg-2 [1085 kB] 76s Get:103 http://ftpmaster.internal/ubuntu plucky/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 76s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 76s Get:105 http://ftpmaster.internal/ubuntu plucky/main amd64 libtk8.6 amd64 8.6.15-1 [862 kB] 76s Get:106 http://ftpmaster.internal/ubuntu plucky/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7build1 [630 kB] 77s Get:107 http://ftpmaster.internal/ubuntu plucky/main amd64 blt amd64 2.5.3+dfsg-7build1 [4840 B] 77s Get:108 http://ftpmaster.internal/ubuntu plucky/universe amd64 libllvm17t64 amd64 1:17.0.6-18 [26.0 MB] 77s Get:109 http://ftpmaster.internal/ubuntu plucky/universe amd64 libclang-cpp17t64 amd64 1:17.0.6-18 [12.8 MB] 78s Get:110 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-12ubuntu1 [148 kB] 78s Get:111 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 14.2.0-12ubuntu1 [28.9 kB] 78s Get:112 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 14.2.0-12ubuntu1 [2998 kB] 78s Get:113 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 14.2.0-12ubuntu1 [1317 kB] 78s Get:114 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 14.2.0-12ubuntu1 [2732 kB] 78s Get:115 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 14.2.0-12ubuntu1 [1177 kB] 78s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 14.2.0-12ubuntu1 [1634 kB] 78s Get:117 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 14.2.0-12ubuntu1 [153 kB] 78s Get:118 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-12ubuntu1 [2815 kB] 78s Get:119 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-12ubuntu1 [2506 kB] 78s Get:120 http://ftpmaster.internal/ubuntu plucky/main amd64 libgc1 amd64 1:8.2.8-1 [102 kB] 78s Get:121 http://ftpmaster.internal/ubuntu plucky/universe amd64 libobjc4 amd64 14.2.0-12ubuntu1 [47.0 kB] 78s Get:122 http://ftpmaster.internal/ubuntu plucky/universe amd64 libobjc-14-dev amd64 14.2.0-12ubuntu1 [194 kB] 78s Get:123 http://ftpmaster.internal/ubuntu plucky/universe amd64 libclang-common-17-dev amd64 1:17.0.6-18 [690 kB] 78s Get:124 http://ftpmaster.internal/ubuntu plucky/universe amd64 llvm-17-linker-tools amd64 1:17.0.6-18 [1301 kB] 78s Get:125 http://ftpmaster.internal/ubuntu plucky/universe amd64 libclang1-17t64 amd64 1:17.0.6-18 [7291 kB] 78s Get:126 http://ftpmaster.internal/ubuntu plucky/universe amd64 clang-17 amd64 1:17.0.6-18 [78.6 kB] 78s Get:127 http://ftpmaster.internal/ubuntu plucky/main amd64 libdconf1 amd64 0.40.0-4build2 [39.4 kB] 78s Get:128 http://ftpmaster.internal/ubuntu plucky/main amd64 dconf-service amd64 0.40.0-4build2 [27.5 kB] 78s Get:129 http://ftpmaster.internal/ubuntu plucky/main amd64 dconf-gsettings-backend amd64 0.40.0-4build2 [22.1 kB] 79s Get:130 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 79s Get:131 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 79s Get:132 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 79s Get:133 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-katex all 0.16.10+~cs6.1.0-2 [775 kB] 79s Get:134 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-katex all 0.16.10+~cs6.1.0-2 [220 kB] 79s Get:135 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 79s Get:136 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 79s Get:137 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-tz all 2024.2-1 [31.5 kB] 79s Get:138 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-decorator all 5.1.1-5 [10.1 kB] 79s Get:139 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-fastjsonschema all 2.21.1-1 [20.4 kB] 79s Get:140 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-platformdirs all 4.3.6-1 [16.8 kB] 79s Get:141 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-traitlets all 5.14.3+really5.14.3-1 [71.5 kB] 79s Get:142 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-jupyter-core all 5.7.2-5 [28.1 kB] 79s Get:143 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-nbformat all 5.9.1-1 [41.2 kB] 79s Get:144 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-tenacity all 8.5.0-0ubuntu1 [17.0 kB] 79s Get:145 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-plotly all 5.20.0+dfsg-1 [2766 kB] 79s Get:146 http://ftpmaster.internal/ubuntu plucky/universe amd64 libann-cctbx0 amd64 1.1.2+doc-9build1 [32.7 kB] 79s Get:147 http://ftpmaster.internal/ubuntu plucky/universe amd64 libann-cctbx-dev amd64 1.1.2+doc-9build1 [45.1 kB] 79s Get:148 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost1.83-dev amd64 1.83.0-4ubuntu1 [10.7 MB] 79s Get:149 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost-python1.83.0 amd64 1.83.0-4ubuntu1 [325 kB] 79s Get:150 http://ftpmaster.internal/ubuntu plucky/main amd64 libexpat1-dev amd64 2.6.4-1 [148 kB] 79s Get:151 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB] 79s Get:152 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.12-dev amd64 3.12.8-3 [5702 kB] 79s Get:153 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3-dev amd64 3.12.8-1 [10.4 kB] 79s Get:154 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12-dev amd64 3.12.8-3 [505 kB] 79s Get:155 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 79s Get:156 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-sphinxdoc all 8.1.3-3 [30.9 kB] 79s Get:157 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dev amd64 3.12.8-1 [26.7 kB] 79s Get:158 http://ftpmaster.internal/ubuntu plucky/universe amd64 libboost-python1.83-dev amd64 1.83.0-4ubuntu1 [338 kB] 79s Get:159 http://ftpmaster.internal/ubuntu plucky/universe amd64 libboost-python-dev amd64 1.83.0.2ubuntu1 [4516 B] 79s Get:160 http://ftpmaster.internal/ubuntu plucky/universe amd64 libccp4-data all 8.0.0-4 [65.2 kB] 79s Get:161 http://ftpmaster.internal/ubuntu plucky/universe amd64 libccp4c0t64 amd64 8.0.0-4 [104 kB] 80s Get:162 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-12ubuntu1 [909 kB] 80s Get:163 http://ftpmaster.internal/ubuntu plucky/universe amd64 libmmdb2-0 amd64 2.0.22-1 [363 kB] 80s Get:164 http://ftpmaster.internal/ubuntu plucky/universe amd64 libccp4f0t64 amd64 8.0.0-4 [228 kB] 80s Get:165 http://ftpmaster.internal/ubuntu plucky/universe amd64 libccp4-dev amd64 8.0.0-4 [42.4 kB] 80s Get:166 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 80s Get:167 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 80s Get:168 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-103-1t64 amd64 1.10.10+repack-5ubuntu1 [1367 kB] 80s Get:169 http://ftpmaster.internal/ubuntu plucky/universe amd64 libcbf1t64 amd64 0.9.7+dfsg1-4build1 [361 kB] 80s Get:170 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 libcctbx0 amd64 2024.10+ds2+~3.22.1+ds1-4 [2057 kB] 80s Get:171 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 libcctbx-dev amd64 2024.10+ds2+~3.22.1+ds1-4 [1193 kB] 80s Get:172 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-legacy-cgi all 2.6.1-2 [16.3 kB] 80s Get:173 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pycbf amd64 0.9.7+dfsg1-4build1 [164 kB] 80s Get:174 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-4 [332 kB] 80s Get:175 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-4 [3177 kB] 80s Get:176 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-numpy amd64 1:1.26.4+ds-12 [5319 kB] 80s Get:177 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-5ubuntu1 [59.5 kB] 80s Get:178 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblzf1 amd64 3.6-4 [7624 B] 80s Get:179 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-h5py-serial amd64 3.11.0-8ubuntu3 [1689 kB] 80s Get:180 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-h5py all 3.11.0-8ubuntu3 [7982 B] 80s Get:181 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-hdf5plugin all 4.0.1-4 [20.5 kB] 80s Get:182 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 80s Get:183 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-lyx all 2.4.2.1-1 [171 kB] 80s Get:184 http://ftpmaster.internal/ubuntu plucky/universe amd64 python-matplotlib-data all 3.8.3-3ubuntu1 [2928 kB] 80s Get:185 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dateutil all 2.9.0-3 [80.2 kB] 80s Get:186 http://ftpmaster.internal/ubuntu plucky/main amd64 libimagequant0 amd64 2.18.0-1build1 [36.3 kB] 80s Get:187 http://ftpmaster.internal/ubuntu plucky/main amd64 liblcms2-2 amd64 2.16-2 [212 kB] 80s Get:188 http://ftpmaster.internal/ubuntu plucky/main amd64 libopenjp2-7 amd64 2.5.0-2ubuntu2 [217 kB] 80s Get:189 http://ftpmaster.internal/ubuntu plucky/main amd64 libraqm0 amd64 0.10.2-1 [17.2 kB] 80s Get:190 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebpdemux2 amd64 1.4.0-0.1 [12.4 kB] 80s Get:191 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebpmux3 amd64 1.4.0-0.1 [25.8 kB] 80s Get:192 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-pil amd64 10.4.0-1ubuntu2 [580 kB] 80s Get:193 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12-tk amd64 3.12.8-3 [116 kB] 80s Get:194 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-tk amd64 3.13.1-2 [107 kB] 80s Get:195 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-tk amd64 3.13.1-1 [9770 B] 80s Get:196 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pil.imagetk amd64 10.4.0-1ubuntu2 [9568 B] 80s Get:197 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-contourpy amd64 1.3.1-1 [271 kB] 80s Get:198 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-cycler all 0.12.1-1 [9716 B] 80s Get:199 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-brotli amd64 1.1.0-2build3 [368 kB] 80s Get:200 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-fs all 2.4.16-5.1 [90.8 kB] 80s Get:201 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lxml amd64 5.3.0-1build1 [1834 kB] 80s Get:202 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-lz4 amd64 4.4.0+dfsg-1 [27.4 kB] 81s Get:203 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblbfgsb0 amd64 3.0+dfsg.4-1build1 [29.9 kB] 81s Get:204 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-scipy amd64 1.14.1-3ubuntu1 [22.3 MB] 82s Get:205 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-mpmath all 1.3.0-1 [425 kB] 82s Get:206 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-sympy all 1.13.3-1 [4228 kB] 82s Get:207 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-ufolib2 all 0.17.0+dfsg1-1 [33.5 kB] 82s Get:208 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-unicodedata2 amd64 15.1.0+ds-1build2 [360 kB] 82s Get:209 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.1-2 [2088 kB] 82s Get:210 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.1-2 [729 kB] 82s Get:211 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-all amd64 3.12.8-1 [890 B] 82s Get:212 http://ftpmaster.internal/ubuntu plucky/universe amd64 unicode-data all 15.1.0-1 [8878 kB] 82s Get:213 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-fonttools amd64 4.55.0-3 [1759 kB] 82s Get:214 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-importlib-resources all 6.4.0-1ubuntu1 [22.8 kB] 82s Get:215 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-kiwisolver amd64 1.4.7-2build1 [70.3 kB] 82s Get:216 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-packaging all 24.2-1 [51.5 kB] 82s Get:217 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqhull-r8.0 amd64 2020.2-6build1 [193 kB] 82s Get:218 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-matplotlib amd64 3.8.3-3ubuntu1 [4691 kB] 82s Get:219 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 82s Get:220 http://ftpmaster.internal/ubuntu plucky/main amd64 sphinx-rtd-theme-common all 3.0.2+dfsg-1 [1014 kB] 82s Get:221 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-mrcfile all 1.5.3-3 [114 kB] 82s Get:222 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-natsort all 8.0.2-2 [33.8 kB] 82s Get:223 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-pint all 0.23-1 [211 kB] 82s Get:224 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-nxmx all 0.0.3-3 [15.7 kB] 82s Get:225 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-ordered-set all 4.1.0-1 [9778 B] 82s Get:226 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-procrunner all 2.3.3-2 [12.0 kB] 82s Get:227 http://ftpmaster.internal/ubuntu plucky/main amd64 libopengl0 amd64 1.7.0-1build1 [32.8 kB] 82s Get:228 http://ftpmaster.internal/ubuntu plucky/main amd64 libglu1-mesa amd64 9.0.2-1.1build1 [152 kB] 82s Get:229 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-opengl all 3.1.7+dfsg-1 [612 kB] 82s Get:230 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyqt5.sip amd64 12.16.1-1 [78.3 kB] 82s Get:231 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5xml5t64 amd64 5.15.15+dfsg-1ubuntu1 [124 kB] 82s Get:232 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5designer5 amd64 5.15.15-4 [2827 kB] 82s Get:233 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5sql5t64 amd64 5.15.15+dfsg-1ubuntu1 [122 kB] 82s Get:234 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5help5 amd64 5.15.15-4 [162 kB] 82s Get:235 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5test5t64 amd64 5.15.15+dfsg-1ubuntu1 [149 kB] 82s Get:236 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyqt5 amd64 5.15.11+dfsg-1build1 [2726 kB] 82s Get:237 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5opengl5t64 amd64 5.15.15+dfsg-1ubuntu1 [150 kB] 82s Get:238 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyqt5.qtopengl amd64 5.15.11+dfsg-1build1 [129 kB] 82s Get:239 http://ftpmaster.internal/ubuntu plucky/universe amd64 libglew2.2 amd64 2.2.0-4build1 [187 kB] 82s Get:240 http://ftpmaster.internal/ubuntu plucky/universe amd64 libnetcdf19t64 amd64 1:4.9.2-6ubuntu1 [472 kB] 82s Get:241 http://ftpmaster.internal/ubuntu plucky/universe amd64 pymol-data all 3.0.0+dfsg-1build1 [1394 kB] 82s Get:242 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pymol amd64 3.0.0+dfsg-1build1 [7705 kB] 83s Get:243 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-six all 1.17.0-1 [13.2 kB] 83s Get:244 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-tqdm all 4.67.1-1 [92.5 kB] 83s Get:245 http://ftpmaster.internal/ubuntu plucky/main amd64 libpcre2-32-0 amd64 10.42-4ubuntu3 [201 kB] 83s Get:246 http://ftpmaster.internal/ubuntu plucky/universe amd64 libwxbase3.2-1t64 amd64 3.2.6+dfsg-2ubuntu1 [980 kB] 83s Get:247 http://ftpmaster.internal/ubuntu plucky/main amd64 libatk1.0-0t64 amd64 2.54.0-1 [55.1 kB] 83s Get:248 http://ftpmaster.internal/ubuntu plucky/main amd64 libxi6 amd64 2:1.8.2-1 [32.4 kB] 83s Get:249 http://ftpmaster.internal/ubuntu plucky/main amd64 libatspi2.0-0t64 amd64 2.54.0-1 [79.6 kB] 83s Get:250 http://ftpmaster.internal/ubuntu plucky/main amd64 libatk-bridge2.0-0t64 amd64 2.54.0-1 [66.3 kB] 83s Get:251 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 83s Get:252 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 83s Get:253 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo-gobject2 amd64 1.18.2-2 [127 kB] 83s Get:254 http://ftpmaster.internal/ubuntu plucky/main amd64 libcolord2 amd64 1.4.7-1build2 [149 kB] 83s Get:255 http://ftpmaster.internal/ubuntu plucky/main amd64 libepoxy0 amd64 1.5.10-2 [218 kB] 83s Get:256 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 83s Get:257 http://ftpmaster.internal/ubuntu plucky/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 83s Get:258 http://ftpmaster.internal/ubuntu plucky/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 83s Get:259 http://ftpmaster.internal/ubuntu plucky/main amd64 libpango-1.0-0 amd64 1.55.0+ds-3 [255 kB] 83s Get:260 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangoft2-1.0-0 amd64 1.55.0+ds-3 [51.9 kB] 83s Get:261 http://ftpmaster.internal/ubuntu plucky/main amd64 libpangocairo-1.0-0 amd64 1.55.0+ds-3 [29.1 kB] 83s Get:262 http://ftpmaster.internal/ubuntu plucky/main amd64 libwayland-cursor0 amd64 1.23.0-1 [10.8 kB] 83s Get:263 http://ftpmaster.internal/ubuntu plucky/main amd64 libwayland-egl1 amd64 1.23.0-1 [5662 B] 83s Get:264 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcomposite1 amd64 1:0.4.6-1 [6642 B] 83s Get:265 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcursor1 amd64 1:1.2.2-1 [20.9 kB] 83s Get:266 http://ftpmaster.internal/ubuntu plucky/main amd64 libxdamage1 amd64 1:1.1.6-1build1 [6150 B] 83s Get:267 http://ftpmaster.internal/ubuntu plucky/main amd64 libxinerama1 amd64 2:1.1.4-3build1 [6396 B] 83s Get:268 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrandr2 amd64 2:1.5.4-1 [19.6 kB] 83s Get:269 http://ftpmaster.internal/ubuntu plucky/main amd64 libgtk-3-common all 3.24.43-4ubuntu1 [1203 kB] 83s Get:270 http://ftpmaster.internal/ubuntu plucky/main amd64 libgtk-3-0t64 amd64 3.24.43-4ubuntu1 [3159 kB] 83s Get:271 http://ftpmaster.internal/ubuntu plucky/main amd64 libnotify4 amd64 0.8.3-1build2 [25.6 kB] 83s Get:272 http://ftpmaster.internal/ubuntu plucky/main amd64 libxtst6 amd64 2:1.2.3-1.1build1 [12.6 kB] 83s Get:273 http://ftpmaster.internal/ubuntu plucky/universe amd64 libwxgtk3.2-1t64 amd64 3.2.6+dfsg-2ubuntu1 [4967 kB] 83s Get:274 http://ftpmaster.internal/ubuntu plucky/universe amd64 libwxgtk-gl3.2-1t64 amd64 3.2.6+dfsg-2ubuntu1 [53.9 kB] 83s Get:275 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-wxgtk4.0 amd64 4.2.2+dfsg-1build1 [10.4 MB] 83s Get:276 http://ftpmaster.internal/ubuntu plucky/universe amd64 libantlr3c-3.4-0 amd64 3.4+dfsg-4build2 [44.9 kB] 83s Get:277 http://ftpmaster.internal/ubuntu plucky/universe amd64 libboost-numpy1.83.0 amd64 1.83.0-4ubuntu1 [242 kB] 83s Get:278 http://ftpmaster.internal/ubuntu plucky/main amd64 libboost-thread1.83.0 amd64 1.83.0-4ubuntu1 [278 kB] 83s Get:279 http://ftpmaster.internal/ubuntu plucky/universe amd64 libboost-timer1.83.0 amd64 1.83.0-4ubuntu1 [241 kB] 83s Get:280 http://ftpmaster.internal/ubuntu plucky/universe amd64 libssm2 amd64 1.4.0-2build1 [87.7 kB] 83s Get:281 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 python3-cctbx amd64 2024.10+ds2+~3.22.1+ds1-4 [32.3 MB] 85s Get:282 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pandas-lib amd64 2.2.3+dfsg-5ubuntu1 [8271 kB] 85s Get:283 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pandas all 2.2.3+dfsg-5ubuntu1 [3112 kB] 85s Get:284 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-psutil amd64 5.9.8-2build3 [196 kB] 85s Get:285 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-fabio amd64 2024.4.0-2build1 [925 kB] 85s Get:286 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-numexpr amd64 2.10.2-1 [135 kB] 85s Get:287 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-mako all 1.3.8-1 [63.5 kB] 85s Get:288 http://ftpmaster.internal/ubuntu plucky/universe amd64 ocl-icd-libopencl1 amd64 2.3.2-1build1 [38.5 kB] 85s Get:289 http://ftpmaster.internal/ubuntu plucky/universe amd64 libpocl2-common all 6.0-2 [82.6 kB] 85s Get:290 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhwloc15 amd64 2.11.2-1build1 [193 kB] 85s Get:291 http://ftpmaster.internal/ubuntu plucky/universe amd64 libpocl2t64 amd64 6.0-2 [9782 kB] 85s Get:292 http://ftpmaster.internal/ubuntu plucky/universe amd64 pocl-opencl-icd amd64 6.0-2 [7164 B] 85s Get:293 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pytools all 2024.1.14-1 [68.4 kB] 85s Get:294 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyopencl amd64 2024.1-2 [777 kB] 85s Get:295 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5svg5 amd64 5.15.15-2 [153 kB] 85s Get:296 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyqt5.qtsvg amd64 5.15.11+dfsg-1build1 [30.0 kB] 85s Get:297 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-comm all 0.2.1-1 [7016 B] 85s Get:298 http://ftpmaster.internal/ubuntu plucky/main amd64 libbabeltrace1 amd64 1.5.11-4build1 [185 kB] 85s Get:299 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebuginfod1t64 amd64 0.192-4 [21.0 kB] 85s Get:300 http://ftpmaster.internal/ubuntu plucky/main amd64 libipt2 amd64 2.1.1-1 [58.9 kB] 85s Get:301 http://ftpmaster.internal/ubuntu plucky/main amd64 libsource-highlight-common all 3.1.9-4.3build1 [64.2 kB] 85s Get:302 http://ftpmaster.internal/ubuntu plucky/main amd64 libsource-highlight4t64 amd64 3.1.9-4.3build1 [258 kB] 85s Get:303 http://ftpmaster.internal/ubuntu plucky/main amd64 gdb amd64 15.2-1ubuntu2 [4879 kB] 86s Get:304 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-coverage amd64 7.4.4+dfsg1-0ubuntu3 [150 kB] 86s Get:305 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-debugpy amd64 1.8.8+ds-2ubuntu1 [1145 kB] 86s Get:306 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-parso all 0.8.4-1 [67.6 kB] 86s Get:307 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-typeshed all 0.0~git20241223.ea91db2-1 [1548 kB] 86s Get:308 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-jedi all 0.19.1+ds1-1 [693 kB] 86s Get:309 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-matplotlib-inline all 0.1.6-2 [8784 B] 86s Get:310 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-wcwidth all 0.2.13+dfsg1-1 [26.3 kB] 86s Get:311 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-prompt-toolkit all 3.0.48-1 [256 kB] 86s Get:312 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-asttokens all 3.0.0-1 [20.4 kB] 86s Get:313 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-executing all 2.1.0-0.1 [24.4 kB] 86s Get:314 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pure-eval all 0.2.3-1 [11.4 kB] 86s Get:315 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-stack-data all 0.6.3-1 [22.0 kB] 86s Get:316 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-ptyprocess all 0.7.0-6 [14.8 kB] 86s Get:317 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-pexpect all 4.9-3 [48.1 kB] 86s Get:318 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-ipython all 8.30.0-2 [569 kB] 86s Get:319 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-tornado amd64 6.4.1-3 [299 kB] 86s Get:320 http://ftpmaster.internal/ubuntu plucky/universe amd64 libnorm1t64 amd64 1.5.9+dfsg-3.1build1 [154 kB] 86s Get:321 http://ftpmaster.internal/ubuntu plucky/universe amd64 libpgm-5.3-0t64 amd64 5.3.128~dfsg-2.1build1 [167 kB] 86s Get:322 http://ftpmaster.internal/ubuntu plucky/main amd64 libsodium23 amd64 1.0.18-1build3 [161 kB] 86s Get:323 http://ftpmaster.internal/ubuntu plucky/universe amd64 libzmq5 amd64 4.3.5-1build2 [260 kB] 86s Get:324 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-zmq amd64 26.2.0-1 [226 kB] 86s Get:325 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-jupyter-client all 8.6.3-1 [78.2 kB] 86s Get:326 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-nest-asyncio all 1.5.4-1 [6256 B] 86s Get:327 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-ipykernel all 6.29.5-2 [82.7 kB] 87s Get:328 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5charts5 amd64 5.15.15-2 [519 kB] 87s Get:329 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyqt5.qtchart amd64 5.15.7+dfsg-1 [147 kB] 87s Get:330 http://ftpmaster.internal/ubuntu plucky/main amd64 libasyncns0 amd64 0.8-6build4 [11.3 kB] 87s Get:331 http://ftpmaster.internal/ubuntu plucky/main amd64 libogg0 amd64 1.3.5-3build1 [22.7 kB] 87s Get:332 http://ftpmaster.internal/ubuntu plucky/main amd64 libflac12t64 amd64 1.4.3+ds-4 [268 kB] 87s Get:333 http://ftpmaster.internal/ubuntu plucky/main amd64 libmp3lame0 amd64 3.100-6build1 [142 kB] 87s Get:334 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpg123-0t64 amd64 1.32.10-1 [191 kB] 87s Get:335 http://ftpmaster.internal/ubuntu plucky/main amd64 libopus0 amd64 1.5.2-2 [2913 kB] 87s Get:336 http://ftpmaster.internal/ubuntu plucky/main amd64 libvorbis0a amd64 1.3.7-2 [98.4 kB] 87s Get:337 http://ftpmaster.internal/ubuntu plucky/main amd64 libvorbisenc2 amd64 1.3.7-2 [80.8 kB] 87s Get:338 http://ftpmaster.internal/ubuntu plucky/main amd64 libsndfile1 amd64 1.2.2-2 [275 kB] 87s Get:339 http://ftpmaster.internal/ubuntu plucky/main amd64 libpulse0 amd64 1:16.1+dfsg1-5.1ubuntu2 [300 kB] 87s Get:340 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5multimedia5 amd64 5.15.15-2 [308 kB] 87s Get:341 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5multimediawidgets5 amd64 5.15.15-2 [42.2 kB] 87s Get:342 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyqt5.qtmultimedia amd64 5.15.11+dfsg-1build1 [229 kB] 87s Get:343 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5positioningquick5 amd64 5.15.15+dfsg-3 [43.5 kB] 87s Get:344 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5location5 amd64 5.15.15+dfsg-3 [750 kB] 87s Get:345 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyqt5.qtpositioning amd64 5.15.11+dfsg-1build1 [153 kB] 87s Get:346 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5quickwidgets5 amd64 5.15.15+dfsg-3 [39.1 kB] 87s Get:347 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyqt5.qtquick amd64 5.15.11+dfsg-1build1 [394 kB] 87s Get:348 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5remoteobjects5 amd64 5.15.15-2 [210 kB] 87s Get:349 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyqt5.qtremoteobjects amd64 5.15.11+dfsg-1build1 [32.6 kB] 87s Get:350 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyqt5.qtsensors amd64 5.15.11+dfsg-1build1 [56.0 kB] 87s Get:351 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5serialport5 amd64 5.15.15-2 [37.6 kB] 87s Get:352 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyqt5.qtserialport amd64 5.15.11+dfsg-1build1 [28.4 kB] 87s Get:353 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyqt5.qtsql amd64 5.15.11+dfsg-1build1 [89.9 kB] 87s Get:354 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5texttospeech5 amd64 5.15.15-2 [22.1 kB] 87s Get:355 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyqt5.qttexttospeech amd64 5.15.11+dfsg-1build1 [17.9 kB] 87s Get:356 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyqt5.qtwebchannel amd64 5.15.11+dfsg-1build1 [15.2 kB] 87s Get:357 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyqt5.qtwebkit amd64 5.15.11+dfsg-1build1 [111 kB] 87s Get:358 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5websockets5 amd64 5.15.15-2 [62.1 kB] 87s Get:359 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyqt5.qtwebsockets amd64 5.15.11+dfsg-1build1 [27.2 kB] 87s Get:360 http://ftpmaster.internal/ubuntu plucky/universe amd64 libqt5xmlpatterns5 amd64 5.15.15-2 [934 kB] 87s Get:361 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyqt5.qtxmlpatterns amd64 5.15.11+dfsg-1build1 [44.7 kB] 87s Get:362 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-qtpy all 2.4.2-4 [57.3 kB] 87s Get:363 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-qtconsole all 5.6.1-2 [84.2 kB] 87s Get:364 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pooch all 1.8.2-1 [49.9 kB] 87s Get:365 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-silx amd64 2.1.2+dfsg-1build1 [3297 kB] 87s Get:366 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pyfai amd64 2024.05-3build1 [4901 kB] 87s Get:367 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-joblib all 1.3.2-5 [206 kB] 87s Get:368 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-threadpoolctl all 3.1.0-1 [21.3 kB] 87s Get:369 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-sklearn-lib amd64 1.4.2+dfsg-7 [6875 kB] 88s Get:370 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-sklearn all 1.4.2+dfsg-7 [2257 kB] 88s Get:371 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-tabulate all 0.9.0-1 [45.3 kB] 88s Get:372 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 python3-dials amd64 3.22.1+dfsg3-1 [4240 kB] 88s Get:373 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 dials amd64 3.22.1+dfsg3-1 [7966 B] 88s Get:374 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-iniconfig all 1.1.1-2 [6024 B] 88s Get:375 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pluggy all 1.5.0-1 [21.0 kB] 88s Get:376 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pytest all 8.3.4-1 [252 kB] 88s Get:377 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-dials-data all 2.4.0-2 [110 kB] 88s Get:378 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-execnet all 2.1.1-1 [33.4 kB] 88s Get:379 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pytest-mock all 3.14.0-2 [11.7 kB] 88s Get:380 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pytest-xdist all 3.6.1-1 [33.8 kB] 89s Preconfiguring packages ... 89s Fetched 367 MB in 15s (25.1 MB/s) 89s Selecting previously unselected package fonts-lato. 89s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75820 files and directories currently installed.) 89s Preparing to unpack .../000-fonts-lato_2.015-1_all.deb ... 89s Unpacking fonts-lato (2.015-1) ... 89s Selecting previously unselected package libdebuginfod-common. 89s Preparing to unpack .../001-libdebuginfod-common_0.192-4_all.deb ... 89s Unpacking libdebuginfod-common (0.192-4) ... 89s Selecting previously unselected package libgstreamer1.0-0:amd64. 89s Preparing to unpack .../002-libgstreamer1.0-0_1.24.10-2_amd64.deb ... 89s Unpacking libgstreamer1.0-0:amd64 (1.24.10-2) ... 89s Selecting previously unselected package liborc-0.4-0t64:amd64. 89s Preparing to unpack .../003-liborc-0.4-0t64_1%3a0.4.40-1_amd64.deb ... 89s Unpacking liborc-0.4-0t64:amd64 (1:0.4.40-1) ... 89s Selecting previously unselected package libgstreamer-plugins-base1.0-0:amd64. 89s Preparing to unpack .../004-libgstreamer-plugins-base1.0-0_1.24.10-1_amd64.deb ... 89s Unpacking libgstreamer-plugins-base1.0-0:amd64 (1.24.10-1) ... 89s Selecting previously unselected package libhyphen0:amd64. 89s Preparing to unpack .../005-libhyphen0_2.8.8-7build3_amd64.deb ... 89s Unpacking libhyphen0:amd64 (2.8.8-7build3) ... 89s Selecting previously unselected package libjpeg-turbo8:amd64. 89s Preparing to unpack .../006-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ... 89s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 89s Selecting previously unselected package libjpeg8:amd64. 89s Preparing to unpack .../007-libjpeg8_8c-2ubuntu11_amd64.deb ... 89s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 89s Selecting previously unselected package libdouble-conversion3:amd64. 89s Preparing to unpack .../008-libdouble-conversion3_3.3.0-1build1_amd64.deb ... 89s Unpacking libdouble-conversion3:amd64 (3.3.0-1build1) ... 89s Selecting previously unselected package libpcre2-16-0:amd64. 89s Preparing to unpack .../009-libpcre2-16-0_10.42-4ubuntu3_amd64.deb ... 89s Unpacking libpcre2-16-0:amd64 (10.42-4ubuntu3) ... 89s Selecting previously unselected package libqt5core5t64:amd64. 89s Preparing to unpack .../010-libqt5core5t64_5.15.15+dfsg-1ubuntu1_amd64.deb ... 89s Unpacking libqt5core5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 89s Selecting previously unselected package fonts-dejavu-mono. 89s Preparing to unpack .../011-fonts-dejavu-mono_2.37-8_all.deb ... 89s Unpacking fonts-dejavu-mono (2.37-8) ... 89s Selecting previously unselected package fonts-dejavu-core. 89s Preparing to unpack .../012-fonts-dejavu-core_2.37-8_all.deb ... 90s Unpacking fonts-dejavu-core (2.37-8) ... 90s Selecting previously unselected package fontconfig-config. 90s Preparing to unpack .../013-fontconfig-config_2.15.0-1.1ubuntu2_amd64.deb ... 90s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 90s Selecting previously unselected package libfontconfig1:amd64. 90s Preparing to unpack .../014-libfontconfig1_2.15.0-1.1ubuntu2_amd64.deb ... 90s Unpacking libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ... 90s Selecting previously unselected package fontconfig. 90s Preparing to unpack .../015-fontconfig_2.15.0-1.1ubuntu2_amd64.deb ... 90s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 90s Selecting previously unselected package libglvnd0:amd64. 90s Preparing to unpack .../016-libglvnd0_1.7.0-1build1_amd64.deb ... 90s Unpacking libglvnd0:amd64 (1.7.0-1build1) ... 90s Selecting previously unselected package libwayland-server0:amd64. 90s Preparing to unpack .../017-libwayland-server0_1.23.0-1_amd64.deb ... 90s Unpacking libwayland-server0:amd64 (1.23.0-1) ... 90s Selecting previously unselected package libxcb-randr0:amd64. 90s Preparing to unpack .../018-libxcb-randr0_1.17.0-2_amd64.deb ... 90s Unpacking libxcb-randr0:amd64 (1.17.0-2) ... 90s Selecting previously unselected package libpciaccess0:amd64. 90s Preparing to unpack .../019-libpciaccess0_0.17-3build1_amd64.deb ... 90s Unpacking libpciaccess0:amd64 (0.17-3build1) ... 90s Selecting previously unselected package libdrm-intel1:amd64. 90s Preparing to unpack .../020-libdrm-intel1_2.4.123-1_amd64.deb ... 90s Unpacking libdrm-intel1:amd64 (2.4.123-1) ... 90s Selecting previously unselected package libdrm-radeon1:amd64. 90s Preparing to unpack .../021-libdrm-radeon1_2.4.123-1_amd64.deb ... 90s Unpacking libdrm-radeon1:amd64 (2.4.123-1) ... 90s Selecting previously unselected package libglapi-mesa:amd64. 90s Preparing to unpack .../022-libglapi-mesa_24.2.8-1ubuntu1_amd64.deb ... 90s Unpacking libglapi-mesa:amd64 (24.2.8-1ubuntu1) ... 90s Selecting previously unselected package libx11-xcb1:amd64. 90s Preparing to unpack .../023-libx11-xcb1_2%3a1.8.10-2_amd64.deb ... 90s Unpacking libx11-xcb1:amd64 (2:1.8.10-2) ... 90s Selecting previously unselected package libxcb-dri2-0:amd64. 90s Preparing to unpack .../024-libxcb-dri2-0_1.17.0-2_amd64.deb ... 90s Unpacking libxcb-dri2-0:amd64 (1.17.0-2) ... 90s Selecting previously unselected package libxcb-dri3-0:amd64. 90s Preparing to unpack .../025-libxcb-dri3-0_1.17.0-2_amd64.deb ... 90s Unpacking libxcb-dri3-0:amd64 (1.17.0-2) ... 90s Selecting previously unselected package libxcb-present0:amd64. 90s Preparing to unpack .../026-libxcb-present0_1.17.0-2_amd64.deb ... 90s Unpacking libxcb-present0:amd64 (1.17.0-2) ... 90s Selecting previously unselected package libxcb-sync1:amd64. 90s Preparing to unpack .../027-libxcb-sync1_1.17.0-2_amd64.deb ... 90s Unpacking libxcb-sync1:amd64 (1.17.0-2) ... 90s Selecting previously unselected package libxcb-xfixes0:amd64. 90s Preparing to unpack .../028-libxcb-xfixes0_1.17.0-2_amd64.deb ... 90s Unpacking libxcb-xfixes0:amd64 (1.17.0-2) ... 90s Selecting previously unselected package libxshmfence1:amd64. 90s Preparing to unpack .../029-libxshmfence1_1.3-1build5_amd64.deb ... 90s Unpacking libxshmfence1:amd64 (1.3-1build5) ... 90s Selecting previously unselected package mesa-libgallium:amd64. 90s Preparing to unpack .../030-mesa-libgallium_24.2.8-1ubuntu1_amd64.deb ... 90s Unpacking mesa-libgallium:amd64 (24.2.8-1ubuntu1) ... 91s Selecting previously unselected package libgbm1:amd64. 91s Preparing to unpack .../031-libgbm1_24.2.8-1ubuntu1_amd64.deb ... 91s Unpacking libgbm1:amd64 (24.2.8-1ubuntu1) ... 91s Selecting previously unselected package libwayland-client0:amd64. 91s Preparing to unpack .../032-libwayland-client0_1.23.0-1_amd64.deb ... 91s Unpacking libwayland-client0:amd64 (1.23.0-1) ... 91s Selecting previously unselected package libxcb-shm0:amd64. 91s Preparing to unpack .../033-libxcb-shm0_1.17.0-2_amd64.deb ... 91s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 91s Selecting previously unselected package libegl-mesa0:amd64. 91s Preparing to unpack .../034-libegl-mesa0_24.2.8-1ubuntu1_amd64.deb ... 91s Unpacking libegl-mesa0:amd64 (24.2.8-1ubuntu1) ... 91s Selecting previously unselected package libegl1:amd64. 91s Preparing to unpack .../035-libegl1_1.7.0-1build1_amd64.deb ... 91s Unpacking libegl1:amd64 (1.7.0-1build1) ... 91s Selecting previously unselected package libxcb-glx0:amd64. 91s Preparing to unpack .../036-libxcb-glx0_1.17.0-2_amd64.deb ... 91s Unpacking libxcb-glx0:amd64 (1.17.0-2) ... 91s Selecting previously unselected package libxfixes3:amd64. 91s Preparing to unpack .../037-libxfixes3_1%3a6.0.0-2build1_amd64.deb ... 91s Unpacking libxfixes3:amd64 (1:6.0.0-2build1) ... 91s Selecting previously unselected package libxxf86vm1:amd64. 91s Preparing to unpack .../038-libxxf86vm1_1%3a1.1.4-1build4_amd64.deb ... 91s Unpacking libxxf86vm1:amd64 (1:1.1.4-1build4) ... 91s Selecting previously unselected package libvulkan1:amd64. 91s Preparing to unpack .../039-libvulkan1_1.3.296.0-1_amd64.deb ... 91s Unpacking libvulkan1:amd64 (1.3.296.0-1) ... 91s Selecting previously unselected package libgl1-mesa-dri:amd64. 91s Preparing to unpack .../040-libgl1-mesa-dri_24.2.8-1ubuntu1_amd64.deb ... 91s Unpacking libgl1-mesa-dri:amd64 (24.2.8-1ubuntu1) ... 91s Selecting previously unselected package libglx-mesa0:amd64. 91s Preparing to unpack .../041-libglx-mesa0_24.2.8-1ubuntu1_amd64.deb ... 91s Unpacking libglx-mesa0:amd64 (24.2.8-1ubuntu1) ... 91s Selecting previously unselected package libglx0:amd64. 91s Preparing to unpack .../042-libglx0_1.7.0-1build1_amd64.deb ... 91s Unpacking libglx0:amd64 (1.7.0-1build1) ... 91s Selecting previously unselected package libgl1:amd64. 91s Preparing to unpack .../043-libgl1_1.7.0-1build1_amd64.deb ... 91s Unpacking libgl1:amd64 (1.7.0-1build1) ... 91s Selecting previously unselected package libgraphite2-3:amd64. 91s Preparing to unpack .../044-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 91s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 91s Selecting previously unselected package libharfbuzz0b:amd64. 91s Preparing to unpack .../045-libharfbuzz0b_10.1.0-1_amd64.deb ... 91s Unpacking libharfbuzz0b:amd64 (10.1.0-1) ... 91s Selecting previously unselected package x11-common. 91s Preparing to unpack .../046-x11-common_1%3a7.7+23ubuntu3_all.deb ... 91s Unpacking x11-common (1:7.7+23ubuntu3) ... 91s Selecting previously unselected package libice6:amd64. 91s Preparing to unpack .../047-libice6_2%3a1.1.1-1_amd64.deb ... 91s Unpacking libice6:amd64 (2:1.1.1-1) ... 91s Selecting previously unselected package libmtdev1t64:amd64. 91s Preparing to unpack .../048-libmtdev1t64_1.1.6-1.2_amd64.deb ... 91s Unpacking libmtdev1t64:amd64 (1.1.6-1.2) ... 91s Selecting previously unselected package libwacom-common. 91s Preparing to unpack .../049-libwacom-common_2.13.0-1_all.deb ... 91s Unpacking libwacom-common (2.13.0-1) ... 91s Selecting previously unselected package libwacom9:amd64. 91s Preparing to unpack .../050-libwacom9_2.13.0-1_amd64.deb ... 91s Unpacking libwacom9:amd64 (2.13.0-1) ... 91s Selecting previously unselected package libinput-bin. 91s Preparing to unpack .../051-libinput-bin_1.26.2-1_amd64.deb ... 91s Unpacking libinput-bin (1.26.2-1) ... 91s Selecting previously unselected package libinput10:amd64. 91s Preparing to unpack .../052-libinput10_1.26.2-1_amd64.deb ... 91s Unpacking libinput10:amd64 (1.26.2-1) ... 91s Selecting previously unselected package libmd4c0:amd64. 91s Preparing to unpack .../053-libmd4c0_0.5.2-2_amd64.deb ... 91s Unpacking libmd4c0:amd64 (0.5.2-2) ... 91s Selecting previously unselected package libqt5dbus5t64:amd64. 91s Preparing to unpack .../054-libqt5dbus5t64_5.15.15+dfsg-1ubuntu1_amd64.deb ... 91s Unpacking libqt5dbus5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 91s Selecting previously unselected package libqt5network5t64:amd64. 91s Preparing to unpack .../055-libqt5network5t64_5.15.15+dfsg-1ubuntu1_amd64.deb ... 91s Unpacking libqt5network5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 91s Selecting previously unselected package libsm6:amd64. 91s Preparing to unpack .../056-libsm6_2%3a1.2.4-1_amd64.deb ... 91s Unpacking libsm6:amd64 (2:1.2.4-1) ... 91s Selecting previously unselected package libxcb-icccm4:amd64. 91s Preparing to unpack .../057-libxcb-icccm4_0.4.2-1_amd64.deb ... 91s Unpacking libxcb-icccm4:amd64 (0.4.2-1) ... 91s Selecting previously unselected package libxcb-util1:amd64. 91s Preparing to unpack .../058-libxcb-util1_0.4.0-1build3_amd64.deb ... 91s Unpacking libxcb-util1:amd64 (0.4.0-1build3) ... 91s Selecting previously unselected package libxcb-image0:amd64. 91s Preparing to unpack .../059-libxcb-image0_0.4.0-2build1_amd64.deb ... 91s Unpacking libxcb-image0:amd64 (0.4.0-2build1) ... 91s Selecting previously unselected package libxcb-keysyms1:amd64. 91s Preparing to unpack .../060-libxcb-keysyms1_0.4.0-1build4_amd64.deb ... 91s Unpacking libxcb-keysyms1:amd64 (0.4.0-1build4) ... 92s Selecting previously unselected package libxcb-render0:amd64. 92s Preparing to unpack .../061-libxcb-render0_1.17.0-2_amd64.deb ... 92s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 92s Selecting previously unselected package libxcb-render-util0:amd64. 92s Preparing to unpack .../062-libxcb-render-util0_0.3.9-1build4_amd64.deb ... 92s Unpacking libxcb-render-util0:amd64 (0.3.9-1build4) ... 92s Selecting previously unselected package libxcb-shape0:amd64. 92s Preparing to unpack .../063-libxcb-shape0_1.17.0-2_amd64.deb ... 92s Unpacking libxcb-shape0:amd64 (1.17.0-2) ... 92s Selecting previously unselected package libxcb-xinerama0:amd64. 92s Preparing to unpack .../064-libxcb-xinerama0_1.17.0-2_amd64.deb ... 92s Unpacking libxcb-xinerama0:amd64 (1.17.0-2) ... 92s Selecting previously unselected package libxcb-xinput0:amd64. 92s Preparing to unpack .../065-libxcb-xinput0_1.17.0-2_amd64.deb ... 92s Unpacking libxcb-xinput0:amd64 (1.17.0-2) ... 92s Selecting previously unselected package libxcb-xkb1:amd64. 92s Preparing to unpack .../066-libxcb-xkb1_1.17.0-2_amd64.deb ... 92s Unpacking libxcb-xkb1:amd64 (1.17.0-2) ... 92s Selecting previously unselected package libxkbcommon-x11-0:amd64. 92s Preparing to unpack .../067-libxkbcommon-x11-0_1.7.0-2_amd64.deb ... 92s Unpacking libxkbcommon-x11-0:amd64 (1.7.0-2) ... 92s Selecting previously unselected package libxrender1:amd64. 92s Preparing to unpack .../068-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 92s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 92s Selecting previously unselected package libqt5gui5t64:amd64. 92s Preparing to unpack .../069-libqt5gui5t64_5.15.15+dfsg-1ubuntu1_amd64.deb ... 92s Unpacking libqt5gui5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 92s Selecting previously unselected package libqt5positioning5:amd64. 92s Preparing to unpack .../070-libqt5positioning5_5.15.15+dfsg-3_amd64.deb ... 92s Unpacking libqt5positioning5:amd64 (5.15.15+dfsg-3) ... 92s Selecting previously unselected package libavahi-common-data:amd64. 92s Preparing to unpack .../071-libavahi-common-data_0.8-14ubuntu1_amd64.deb ... 92s Unpacking libavahi-common-data:amd64 (0.8-14ubuntu1) ... 92s Selecting previously unselected package libavahi-common3:amd64. 92s Preparing to unpack .../072-libavahi-common3_0.8-14ubuntu1_amd64.deb ... 92s Unpacking libavahi-common3:amd64 (0.8-14ubuntu1) ... 92s Selecting previously unselected package libavahi-client3:amd64. 92s Preparing to unpack .../073-libavahi-client3_0.8-14ubuntu1_amd64.deb ... 92s Unpacking libavahi-client3:amd64 (0.8-14ubuntu1) ... 92s Selecting previously unselected package libcups2t64:amd64. 92s Preparing to unpack .../074-libcups2t64_2.4.11-0ubuntu2_amd64.deb ... 92s Unpacking libcups2t64:amd64 (2.4.11-0ubuntu2) ... 92s Selecting previously unselected package libqt5widgets5t64:amd64. 92s Preparing to unpack .../075-libqt5widgets5t64_5.15.15+dfsg-1ubuntu1_amd64.deb ... 92s Unpacking libqt5widgets5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 92s Selecting previously unselected package libqt5printsupport5t64:amd64. 92s Preparing to unpack .../076-libqt5printsupport5t64_5.15.15+dfsg-1ubuntu1_amd64.deb ... 92s Unpacking libqt5printsupport5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 92s Selecting previously unselected package libqt5qml5:amd64. 92s Preparing to unpack .../077-libqt5qml5_5.15.15+dfsg-3_amd64.deb ... 92s Unpacking libqt5qml5:amd64 (5.15.15+dfsg-3) ... 92s Selecting previously unselected package libqt5qmlmodels5:amd64. 92s Preparing to unpack .../078-libqt5qmlmodels5_5.15.15+dfsg-3_amd64.deb ... 92s Unpacking libqt5qmlmodels5:amd64 (5.15.15+dfsg-3) ... 92s Selecting previously unselected package libqt5quick5:amd64. 92s Preparing to unpack .../079-libqt5quick5_5.15.15+dfsg-3_amd64.deb ... 92s Unpacking libqt5quick5:amd64 (5.15.15+dfsg-3) ... 92s Selecting previously unselected package libqt5sensors5:amd64. 92s Preparing to unpack .../080-libqt5sensors5_5.15.15-2_amd64.deb ... 92s Unpacking libqt5sensors5:amd64 (5.15.15-2) ... 92s Selecting previously unselected package libqt5webchannel5:amd64. 92s Preparing to unpack .../081-libqt5webchannel5_5.15.15-2_amd64.deb ... 92s Unpacking libqt5webchannel5:amd64 (5.15.15-2) ... 92s Selecting previously unselected package libsharpyuv0:amd64. 92s Preparing to unpack .../082-libsharpyuv0_1.4.0-0.1_amd64.deb ... 92s Unpacking libsharpyuv0:amd64 (1.4.0-0.1) ... 92s Selecting previously unselected package libwebp7:amd64. 92s Preparing to unpack .../083-libwebp7_1.4.0-0.1_amd64.deb ... 92s Unpacking libwebp7:amd64 (1.4.0-0.1) ... 92s Selecting previously unselected package libwoff1:amd64. 92s Preparing to unpack .../084-libwoff1_1.0.2-2build1_amd64.deb ... 92s Unpacking libwoff1:amd64 (1.0.2-2build1) ... 92s Selecting previously unselected package libxslt1.1:amd64. 92s Preparing to unpack .../085-libxslt1.1_1.1.39-0exp1ubuntu2_amd64.deb ... 92s Unpacking libxslt1.1:amd64 (1.1.39-0exp1ubuntu2) ... 92s Selecting previously unselected package libqt5webkit5:amd64. 92s Preparing to unpack .../086-libqt5webkit5_5.212.0~alpha4-41_amd64.deb ... 92s Unpacking libqt5webkit5:amd64 (5.212.0~alpha4-41) ... 93s Selecting previously unselected package libpython3.13-minimal:amd64. 93s Preparing to unpack .../087-libpython3.13-minimal_3.13.1-2_amd64.deb ... 93s Unpacking libpython3.13-minimal:amd64 (3.13.1-2) ... 93s Selecting previously unselected package python3.13-minimal. 93s Preparing to unpack .../088-python3.13-minimal_3.13.1-2_amd64.deb ... 93s Unpacking python3.13-minimal (3.13.1-2) ... 93s Selecting previously unselected package libgdk-pixbuf2.0-common. 93s Preparing to unpack .../089-libgdk-pixbuf2.0-common_2.42.12+dfsg-1_all.deb ... 93s Unpacking libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... 93s Selecting previously unselected package libdeflate0:amd64. 93s Preparing to unpack .../090-libdeflate0_1.22-1_amd64.deb ... 93s Unpacking libdeflate0:amd64 (1.22-1) 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(14.2.0-12ubuntu1) ... 96s Selecting previously unselected package libasan8:amd64. 96s Preparing to unpack .../111-libasan8_14.2.0-12ubuntu1_amd64.deb ... 96s Unpacking libasan8:amd64 (14.2.0-12ubuntu1) ... 96s Selecting previously unselected package liblsan0:amd64. 96s Preparing to unpack .../112-liblsan0_14.2.0-12ubuntu1_amd64.deb ... 96s Unpacking liblsan0:amd64 (14.2.0-12ubuntu1) ... 96s Selecting previously unselected package libtsan2:amd64. 96s Preparing to unpack .../113-libtsan2_14.2.0-12ubuntu1_amd64.deb ... 96s Unpacking libtsan2:amd64 (14.2.0-12ubuntu1) ... 96s Selecting previously unselected package libubsan1:amd64. 96s Preparing to unpack .../114-libubsan1_14.2.0-12ubuntu1_amd64.deb ... 96s Unpacking libubsan1:amd64 (14.2.0-12ubuntu1) ... 96s Selecting previously unselected package libhwasan0:amd64. 96s Preparing to unpack .../115-libhwasan0_14.2.0-12ubuntu1_amd64.deb ... 96s Unpacking libhwasan0:amd64 (14.2.0-12ubuntu1) ... 96s Selecting previously unselected package libquadmath0:amd64. 96s Preparing to unpack .../116-libquadmath0_14.2.0-12ubuntu1_amd64.deb ... 96s Unpacking libquadmath0:amd64 (14.2.0-12ubuntu1) ... 96s Selecting previously unselected package libgcc-14-dev:amd64. 96s Preparing to unpack .../117-libgcc-14-dev_14.2.0-12ubuntu1_amd64.deb ... 96s Unpacking libgcc-14-dev:amd64 (14.2.0-12ubuntu1) ... 96s Selecting previously unselected package libstdc++-14-dev:amd64. 96s Preparing to unpack .../118-libstdc++-14-dev_14.2.0-12ubuntu1_amd64.deb ... 96s Unpacking libstdc++-14-dev:amd64 (14.2.0-12ubuntu1) ... 96s Selecting previously unselected package libgc1:amd64. 96s Preparing to unpack .../119-libgc1_1%3a8.2.8-1_amd64.deb ... 96s Unpacking libgc1:amd64 (1:8.2.8-1) ... 96s Selecting previously unselected package libobjc4:amd64. 96s Preparing to unpack .../120-libobjc4_14.2.0-12ubuntu1_amd64.deb ... 96s Unpacking libobjc4:amd64 (14.2.0-12ubuntu1) ... 96s Selecting previously unselected package libobjc-14-dev:amd64. 96s Preparing to unpack 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... 103s Selecting previously unselected package libcbf1t64:amd64. 103s Preparing to unpack .../168-libcbf1t64_0.9.7+dfsg1-4build1_amd64.deb ... 103s Unpacking libcbf1t64:amd64 (0.9.7+dfsg1-4build1) ... 103s Selecting previously unselected package libcctbx0. 103s Preparing to unpack .../169-libcctbx0_2024.10+ds2+~3.22.1+ds1-4_amd64.deb ... 103s Unpacking libcctbx0 (2024.10+ds2+~3.22.1+ds1-4) ... 103s Selecting previously unselected package libcctbx-dev. 103s Preparing to unpack .../170-libcctbx-dev_2024.10+ds2+~3.22.1+ds1-4_amd64.deb ... 103s Unpacking libcctbx-dev (2024.10+ds2+~3.22.1+ds1-4) ... 103s Selecting previously unselected package python3-legacy-cgi. 103s Preparing to unpack .../171-python3-legacy-cgi_2.6.1-2_all.deb ... 103s Unpacking python3-legacy-cgi (2.6.1-2) ... 103s Selecting previously unselected package python3-pycbf. 103s Preparing to unpack .../172-python3-pycbf_0.9.7+dfsg1-4build1_amd64.deb ... 103s Unpacking python3-pycbf (0.9.7+dfsg1-4build1) ... 103s Selecting previously unselected package libblas3:amd64. 103s Preparing to unpack .../173-libblas3_3.12.0-4_amd64.deb ... 103s Unpacking libblas3:amd64 (3.12.0-4) ... 103s Selecting previously unselected package liblapack3:amd64. 103s Preparing to unpack .../174-liblapack3_3.12.0-4_amd64.deb ... 103s Unpacking liblapack3:amd64 (3.12.0-4) ... 104s Selecting previously unselected package python3-numpy. 104s Preparing to unpack .../175-python3-numpy_1%3a1.26.4+ds-12_amd64.deb ... 104s Unpacking python3-numpy (1:1.26.4+ds-12) ... 104s Selecting previously unselected package libhdf5-hl-100t64:amd64. 104s Preparing to unpack .../176-libhdf5-hl-100t64_1.10.10+repack-5ubuntu1_amd64.deb ... 104s Unpacking libhdf5-hl-100t64:amd64 (1.10.10+repack-5ubuntu1) ... 104s Selecting previously unselected package liblzf1:amd64. 104s Preparing to unpack .../177-liblzf1_3.6-4_amd64.deb ... 104s Unpacking liblzf1:amd64 (3.6-4) ... 104s Selecting previously unselected package python3-h5py-serial. 104s Preparing to unpack .../178-python3-h5py-serial_3.11.0-8ubuntu3_amd64.deb ... 104s Unpacking python3-h5py-serial (3.11.0-8ubuntu3) ... 104s Selecting previously unselected package python3-h5py. 104s Preparing to unpack .../179-python3-h5py_3.11.0-8ubuntu3_all.deb ... 104s Unpacking python3-h5py (3.11.0-8ubuntu3) ... 104s Selecting previously unselected package python3-hdf5plugin. 104s Preparing to unpack .../180-python3-hdf5plugin_4.0.1-4_all.deb ... 104s Unpacking python3-hdf5plugin (4.0.1-4) ... 104s Selecting previously unselected package libjs-jquery-ui. 104s Preparing to unpack .../181-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 104s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 104s Selecting previously unselected package fonts-lyx. 104s Preparing to unpack .../182-fonts-lyx_2.4.2.1-1_all.deb ... 104s Unpacking fonts-lyx (2.4.2.1-1) ... 104s Selecting previously unselected package python-matplotlib-data. 104s Preparing to unpack .../183-python-matplotlib-data_3.8.3-3ubuntu1_all.deb ... 104s 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unselected package libwebpdemux2:amd64. 104s Preparing to unpack .../189-libwebpdemux2_1.4.0-0.1_amd64.deb ... 104s Unpacking libwebpdemux2:amd64 (1.4.0-0.1) ... 104s Selecting previously unselected package libwebpmux3:amd64. 105s Preparing to unpack .../190-libwebpmux3_1.4.0-0.1_amd64.deb ... 105s Unpacking libwebpmux3:amd64 (1.4.0-0.1) ... 105s Selecting previously unselected package python3-pil:amd64. 105s Preparing to unpack .../191-python3-pil_10.4.0-1ubuntu2_amd64.deb ... 105s Unpacking python3-pil:amd64 (10.4.0-1ubuntu2) ... 105s Selecting previously unselected package python3.12-tk. 105s Preparing to unpack .../192-python3.12-tk_3.12.8-3_amd64.deb ... 105s Unpacking python3.12-tk (3.12.8-3) ... 105s Selecting previously unselected package python3.13-tk. 105s Preparing to unpack .../193-python3.13-tk_3.13.1-2_amd64.deb ... 105s Unpacking python3.13-tk (3.13.1-2) ... 105s Selecting previously unselected package python3-tk:amd64. 105s Preparing to unpack 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python3-fs (2.4.16-5.1) ... 105s Selecting previously unselected package python3-lxml:amd64. 105s Preparing to unpack .../200-python3-lxml_5.3.0-1build1_amd64.deb ... 105s Unpacking python3-lxml:amd64 (5.3.0-1build1) ... 105s Selecting previously unselected package python3-lz4. 105s Preparing to unpack .../201-python3-lz4_4.4.0+dfsg-1_amd64.deb ... 105s Unpacking python3-lz4 (4.4.0+dfsg-1) ... 105s Selecting previously unselected package liblbfgsb0:amd64. 105s Preparing to unpack .../202-liblbfgsb0_3.0+dfsg.4-1build1_amd64.deb ... 105s Unpacking liblbfgsb0:amd64 (3.0+dfsg.4-1build1) ... 105s Selecting previously unselected package python3-scipy. 105s Preparing to unpack .../203-python3-scipy_1.14.1-3ubuntu1_amd64.deb ... 105s Unpacking python3-scipy (1.14.1-3ubuntu1) ... 106s Selecting previously unselected package python3-mpmath. 106s Preparing to unpack .../204-python3-mpmath_1.3.0-1_all.deb ... 106s Unpacking python3-mpmath (1.3.0-1) ... 106s Selecting previously unselected package 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previously unselected package python3-pymol. 109s Preparing to unpack .../241-python3-pymol_3.0.0+dfsg-1build1_amd64.deb ... 109s Unpacking python3-pymol (3.0.0+dfsg-1build1) ... 109s Selecting previously unselected package python3-six. 109s Preparing to unpack .../242-python3-six_1.17.0-1_all.deb ... 109s Unpacking python3-six (1.17.0-1) ... 109s Selecting previously unselected package python3-tqdm. 109s Preparing to unpack .../243-python3-tqdm_4.67.1-1_all.deb ... 109s Unpacking python3-tqdm (4.67.1-1) ... 109s Selecting previously unselected package libpcre2-32-0:amd64. 109s Preparing to unpack .../244-libpcre2-32-0_10.42-4ubuntu3_amd64.deb ... 109s Unpacking libpcre2-32-0:amd64 (10.42-4ubuntu3) ... 109s Selecting previously unselected package libwxbase3.2-1t64:amd64. 109s Preparing to unpack .../245-libwxbase3.2-1t64_3.2.6+dfsg-2ubuntu1_amd64.deb ... 109s Unpacking libwxbase3.2-1t64:amd64 (3.2.6+dfsg-2ubuntu1) ... 109s Selecting previously unselected package libatk1.0-0t64:amd64. 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previously unselected package libxrandr2:amd64. 110s Preparing to unpack .../267-libxrandr2_2%3a1.5.4-1_amd64.deb ... 110s Unpacking libxrandr2:amd64 (2:1.5.4-1) ... 110s Selecting previously unselected package libgtk-3-common. 110s Preparing to unpack .../268-libgtk-3-common_3.24.43-4ubuntu1_all.deb ... 110s Unpacking libgtk-3-common (3.24.43-4ubuntu1) ... 110s Selecting previously unselected package libgtk-3-0t64:amd64. 110s Preparing to unpack .../269-libgtk-3-0t64_3.24.43-4ubuntu1_amd64.deb ... 110s Unpacking libgtk-3-0t64:amd64 (3.24.43-4ubuntu1) ... 110s Selecting previously unselected package libnotify4:amd64. 110s Preparing to unpack .../270-libnotify4_0.8.3-1build2_amd64.deb ... 110s Unpacking libnotify4:amd64 (0.8.3-1build2) ... 110s Selecting previously unselected package libxtst6:amd64. 110s Preparing to unpack .../271-libxtst6_2%3a1.2.3-1.1build1_amd64.deb ... 110s Unpacking libxtst6:amd64 (2:1.2.3-1.1build1) ... 110s Selecting previously unselected package libwxgtk3.2-1t64:amd64. 110s Preparing to unpack .../272-libwxgtk3.2-1t64_3.2.6+dfsg-2ubuntu1_amd64.deb ... 110s Unpacking libwxgtk3.2-1t64:amd64 (3.2.6+dfsg-2ubuntu1) ... 110s Selecting previously unselected package libwxgtk-gl3.2-1t64:amd64. 110s Preparing to unpack .../273-libwxgtk-gl3.2-1t64_3.2.6+dfsg-2ubuntu1_amd64.deb ... 110s Unpacking libwxgtk-gl3.2-1t64:amd64 (3.2.6+dfsg-2ubuntu1) ... 110s Selecting previously unselected package python3-wxgtk4.0. 110s Preparing to unpack .../274-python3-wxgtk4.0_4.2.2+dfsg-1build1_amd64.deb ... 110s Unpacking python3-wxgtk4.0 (4.2.2+dfsg-1build1) ... 111s Selecting previously unselected package libantlr3c-3.4-0:amd64. 111s Preparing to unpack .../275-libantlr3c-3.4-0_3.4+dfsg-4build2_amd64.deb ... 111s Unpacking libantlr3c-3.4-0:amd64 (3.4+dfsg-4build2) ... 111s Selecting previously unselected package libboost-numpy1.83.0. 111s Preparing to unpack .../276-libboost-numpy1.83.0_1.83.0-4ubuntu1_amd64.deb ... 111s Unpacking libboost-numpy1.83.0 (1.83.0-4ubuntu1) ... 111s Selecting previously unselected package libboost-thread1.83.0:amd64. 111s Preparing to unpack .../277-libboost-thread1.83.0_1.83.0-4ubuntu1_amd64.deb ... 111s Unpacking libboost-thread1.83.0:amd64 (1.83.0-4ubuntu1) ... 111s Selecting previously unselected package libboost-timer1.83.0:amd64. 111s Preparing to unpack .../278-libboost-timer1.83.0_1.83.0-4ubuntu1_amd64.deb ... 111s Unpacking libboost-timer1.83.0:amd64 (1.83.0-4ubuntu1) ... 111s Selecting previously unselected package libssm2:amd64. 111s Preparing to unpack .../279-libssm2_1.4.0-2build1_amd64.deb ... 111s Unpacking libssm2:amd64 (1.4.0-2build1) ... 111s Selecting previously unselected package python3-cctbx. 111s Preparing to unpack .../280-python3-cctbx_2024.10+ds2+~3.22.1+ds1-4_amd64.deb ... 111s Unpacking python3-cctbx (2024.10+ds2+~3.22.1+ds1-4) ... 113s Selecting previously unselected package python3-pandas-lib:amd64. 113s Preparing to unpack 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pocl-opencl-icd:amd64 (6.0-2) ... 114s Selecting previously unselected package python3-pytools. 114s Preparing to unpack .../292-python3-pytools_2024.1.14-1_all.deb ... 114s Unpacking python3-pytools (2024.1.14-1) ... 114s Selecting previously unselected package python3-pyopencl. 114s Preparing to unpack .../293-python3-pyopencl_2024.1-2_amd64.deb ... 114s Unpacking python3-pyopencl (2024.1-2) ... 114s Selecting previously unselected package libqt5svg5:amd64. 114s Preparing to unpack .../294-libqt5svg5_5.15.15-2_amd64.deb ... 114s Unpacking libqt5svg5:amd64 (5.15.15-2) ... 114s Selecting previously unselected package python3-pyqt5.qtsvg. 114s Preparing to unpack .../295-python3-pyqt5.qtsvg_5.15.11+dfsg-1build1_amd64.deb ... 114s Unpacking python3-pyqt5.qtsvg (5.15.11+dfsg-1build1) ... 114s Selecting previously unselected package python3-comm. 114s Preparing to unpack .../296-python3-comm_0.2.1-1_all.deb ... 114s Unpacking python3-comm (0.2.1-1) ... 114s Selecting previously unselected package libbabeltrace1:amd64. 114s Preparing to unpack .../297-libbabeltrace1_1.5.11-4build1_amd64.deb ... 114s Unpacking libbabeltrace1:amd64 (1.5.11-4build1) ... 114s Selecting previously unselected package libdebuginfod1t64:amd64. 114s Preparing to unpack .../298-libdebuginfod1t64_0.192-4_amd64.deb ... 114s Unpacking libdebuginfod1t64:amd64 (0.192-4) ... 114s Selecting previously unselected package libipt2. 114s Preparing to unpack .../299-libipt2_2.1.1-1_amd64.deb ... 114s Unpacking libipt2 (2.1.1-1) ... 114s Selecting previously unselected package libsource-highlight-common. 114s Preparing to unpack .../300-libsource-highlight-common_3.1.9-4.3build1_all.deb ... 114s Unpacking libsource-highlight-common (3.1.9-4.3build1) ... 114s Selecting previously unselected package libsource-highlight4t64:amd64. 114s Preparing to unpack .../301-libsource-highlight4t64_3.1.9-4.3build1_amd64.deb ... 114s Unpacking libsource-highlight4t64:amd64 (3.1.9-4.3build1) ... 114s Selecting previously unselected package gdb. 114s Preparing to unpack .../302-gdb_15.2-1ubuntu2_amd64.deb ... 114s Unpacking gdb (15.2-1ubuntu2) ... 114s Selecting previously unselected package python3-coverage. 114s Preparing to unpack .../303-python3-coverage_7.4.4+dfsg1-0ubuntu3_amd64.deb ... 114s Unpacking python3-coverage (7.4.4+dfsg1-0ubuntu3) ... 114s Selecting previously unselected package python3-debugpy. 114s Preparing to unpack .../304-python3-debugpy_1.8.8+ds-2ubuntu1_amd64.deb ... 114s Unpacking python3-debugpy (1.8.8+ds-2ubuntu1) ... 114s Selecting previously unselected package python3-parso. 114s Preparing to unpack .../305-python3-parso_0.8.4-1_all.deb ... 114s Unpacking python3-parso (0.8.4-1) ... 114s Selecting previously unselected package python3-typeshed. 114s Preparing to unpack .../306-python3-typeshed_0.0~git20241223.ea91db2-1_all.deb ... 114s Unpacking python3-typeshed (0.0~git20241223.ea91db2-1) ... 115s Selecting previously unselected package python3-jedi. 115s Preparing to unpack .../307-python3-jedi_0.19.1+ds1-1_all.deb ... 115s Unpacking python3-jedi (0.19.1+ds1-1) ... 115s Selecting previously unselected package python3-matplotlib-inline. 115s Preparing to unpack .../308-python3-matplotlib-inline_0.1.6-2_all.deb ... 115s Unpacking python3-matplotlib-inline (0.1.6-2) ... 115s Selecting previously unselected package python3-wcwidth. 115s Preparing to unpack .../309-python3-wcwidth_0.2.13+dfsg1-1_all.deb ... 115s Unpacking python3-wcwidth (0.2.13+dfsg1-1) ... 115s Selecting previously unselected package python3-prompt-toolkit. 115s Preparing to unpack .../310-python3-prompt-toolkit_3.0.48-1_all.deb ... 115s Unpacking python3-prompt-toolkit (3.0.48-1) ... 115s Selecting previously unselected package python3-asttokens. 115s Preparing to unpack .../311-python3-asttokens_3.0.0-1_all.deb ... 115s Unpacking python3-asttokens (3.0.0-1) ... 116s Selecting previously unselected package python3-executing. 116s Preparing to unpack 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116s Selecting previously unselected package python3-tornado. 116s Preparing to unpack .../318-python3-tornado_6.4.1-3_amd64.deb ... 116s Unpacking python3-tornado (6.4.1-3) ... 116s Selecting previously unselected package libnorm1t64:amd64. 116s Preparing to unpack .../319-libnorm1t64_1.5.9+dfsg-3.1build1_amd64.deb ... 116s Unpacking libnorm1t64:amd64 (1.5.9+dfsg-3.1build1) ... 116s Selecting previously unselected package libpgm-5.3-0t64:amd64. 116s Preparing to unpack .../320-libpgm-5.3-0t64_5.3.128~dfsg-2.1build1_amd64.deb ... 116s Unpacking libpgm-5.3-0t64:amd64 (5.3.128~dfsg-2.1build1) ... 116s Selecting previously unselected package libsodium23:amd64. 116s Preparing to unpack .../321-libsodium23_1.0.18-1build3_amd64.deb ... 116s Unpacking libsodium23:amd64 (1.0.18-1build3) ... 116s Selecting previously unselected package libzmq5:amd64. 116s Preparing to unpack .../322-libzmq5_4.3.5-1build2_amd64.deb ... 116s Unpacking libzmq5:amd64 (4.3.5-1build2) ... 116s Selecting previously unselected package python3-zmq. 116s Preparing to unpack .../323-python3-zmq_26.2.0-1_amd64.deb ... 116s Unpacking python3-zmq (26.2.0-1) ... 116s Selecting previously unselected package python3-jupyter-client. 116s Preparing to unpack .../324-python3-jupyter-client_8.6.3-1_all.deb ... 116s Unpacking python3-jupyter-client (8.6.3-1) ... 116s Selecting previously unselected package python3-nest-asyncio. 116s Preparing to unpack .../325-python3-nest-asyncio_1.5.4-1_all.deb ... 116s Unpacking python3-nest-asyncio (1.5.4-1) ... 116s Selecting previously unselected package python3-ipykernel. 116s Preparing to unpack .../326-python3-ipykernel_6.29.5-2_all.deb ... 116s Unpacking python3-ipykernel (6.29.5-2) ... 116s Selecting previously unselected package libqt5charts5:amd64. 116s Preparing to unpack .../327-libqt5charts5_5.15.15-2_amd64.deb ... 116s Unpacking libqt5charts5:amd64 (5.15.15-2) ... 116s Selecting previously unselected package python3-pyqt5.qtchart. 116s Preparing to unpack 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Unpacking libmpg123-0t64:amd64 (1.32.10-1) ... 117s Selecting previously unselected package libopus0:amd64. 117s Preparing to unpack .../334-libopus0_1.5.2-2_amd64.deb ... 117s Unpacking libopus0:amd64 (1.5.2-2) ... 117s Selecting previously unselected package libvorbis0a:amd64. 117s Preparing to unpack .../335-libvorbis0a_1.3.7-2_amd64.deb ... 117s Unpacking libvorbis0a:amd64 (1.3.7-2) ... 117s Selecting previously unselected package libvorbisenc2:amd64. 117s Preparing to unpack .../336-libvorbisenc2_1.3.7-2_amd64.deb ... 117s Unpacking libvorbisenc2:amd64 (1.3.7-2) ... 117s Selecting previously unselected package libsndfile1:amd64. 117s Preparing to unpack .../337-libsndfile1_1.2.2-2_amd64.deb ... 117s Unpacking libsndfile1:amd64 (1.2.2-2) ... 117s Selecting previously unselected package libpulse0:amd64. 117s Preparing to unpack .../338-libpulse0_1%3a16.1+dfsg1-5.1ubuntu2_amd64.deb ... 117s Unpacking libpulse0:amd64 (1:16.1+dfsg1-5.1ubuntu2) ... 117s Selecting previously unselected package libqt5multimedia5:amd64. 117s Preparing to unpack .../339-libqt5multimedia5_5.15.15-2_amd64.deb ... 117s Unpacking libqt5multimedia5:amd64 (5.15.15-2) ... 117s Selecting previously unselected package libqt5multimediawidgets5:amd64. 117s Preparing to unpack .../340-libqt5multimediawidgets5_5.15.15-2_amd64.deb ... 117s Unpacking libqt5multimediawidgets5:amd64 (5.15.15-2) ... 117s Selecting previously unselected package python3-pyqt5.qtmultimedia. 117s Preparing to unpack .../341-python3-pyqt5.qtmultimedia_5.15.11+dfsg-1build1_amd64.deb ... 117s Unpacking python3-pyqt5.qtmultimedia (5.15.11+dfsg-1build1) ... 117s Selecting previously unselected package libqt5positioningquick5:amd64. 117s Preparing to unpack .../342-libqt5positioningquick5_5.15.15+dfsg-3_amd64.deb ... 117s Unpacking libqt5positioningquick5:amd64 (5.15.15+dfsg-3) ... 117s Selecting previously unselected package libqt5location5:amd64. 117s Preparing to unpack .../343-libqt5location5_5.15.15+dfsg-3_amd64.deb ... 117s 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(0.8.3-1build2) ... 173s Setting up python3-dev (3.12.8-1) ... 173s Setting up libboost-python1.83-dev (1.83.0-4ubuntu1) ... 173s Setting up python3-pycbf (0.9.7+dfsg1-4build1) ... 173s Setting up python3-ipykernel (6.29.5-2) ... 174s Setting up python3-h5py (3.11.0-8ubuntu3) ... 174s Setting up python3-sklearn (1.4.2+dfsg-7) ... 177s Setting up python3-numexpr (2.10.2-1) ... 177s Setting up python3-pytools (2024.1.14-1) ... 177s Setting up libglew2.2:amd64 (2.2.0-4build1) ... 177s Setting up python3-hdf5plugin (4.0.1-4) ... 177s Setting up libcairo-gobject2:amd64 (1.18.2-2) ... 177s Setting up libpangoft2-1.0-0:amd64 (1.55.0+ds-3) ... 177s Setting up python3-nxmx (0.0.3-3) ... 177s Setting up libcups2t64:amd64 (2.4.11-0ubuntu2) ... 177s Setting up libgtk-3-common (3.24.43-4ubuntu1) ... 177s Setting up libpangocairo-1.0-0:amd64 (1.55.0+ds-3) ... 177s Setting up libcctbx0 (2024.10+ds2+~3.22.1+ds1-4) ... 177s Setting up tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 177s Setting up blt (2.5.3+dfsg-7build1) ... 177s Setting up clang-17 (1:17.0.6-18) ... 177s Setting up python3-tk:amd64 (3.13.1-1) ... 177s Setting up python3-opengl (3.1.7+dfsg-1) ... 178s /usr/lib/python3/dist-packages/OpenGL/GL/AMD/vertex_shader_tessellator.py:1: SyntaxWarning: invalid escape sequence '\ ' 178s '''OpenGL extension AMD.vertex_shader_tessellator 179s /usr/lib/python3/dist-packages/OpenGL/GL/AMD/vertex_shader_tessellator.py:1: SyntaxWarning: invalid escape sequence '\ ' 179s '''OpenGL extension AMD.vertex_shader_tessellator 180s Setting up libboost-python-dev (1.83.0.2ubuntu1) ... 180s Setting up libqt5gui5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 180s Setting up python3-pil.imagetk:amd64 (10.4.0-1ubuntu2) ... 180s Setting up libqt5quick5:amd64 (5.15.15+dfsg-3) ... 180s Setting up libcctbx-dev (2024.10+ds2+~3.22.1+ds1-4) ... 180s Setting up libqt5positioningquick5:amd64 (5.15.15+dfsg-3) ... 180s Setting up libqt5location5:amd64 (5.15.15+dfsg-3) ... 180s Setting up libqt5widgets5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 180s Setting up libpocl2t64:amd64 (6.0-2) ... 180s Setting up libqt5svg5:amd64 (5.15.15-2) ... 180s Setting up libqt5help5:amd64 (5.15.15-4) ... 180s Setting up libqt5charts5:amd64 (5.15.15-2) ... 180s Setting up libqt5multimedia5:amd64 (5.15.15-2) ... 180s Setting up libqt5quickwidgets5:amd64 (5.15.15+dfsg-3) ... 180s Setting up pocl-opencl-icd:amd64 (6.0-2) ... 180s Setting up libqt5multimediawidgets5:amd64 (5.15.15-2) ... 180s Setting up libqt5opengl5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 180s Setting up python3-pyopencl (2024.1-2) ... 181s Setting up libqt5printsupport5t64:amd64 (5.15.15+dfsg-1ubuntu1) ... 181s Setting up libqt5designer5:amd64 (5.15.15-4) ... 181s Setting up libqt5webkit5:amd64 (5.212.0~alpha4-41) ... 181s Setting up python3-pyqt5 (5.15.11+dfsg-1build1) ... 181s Setting up python3-pyqt5.qtpositioning (5.15.11+dfsg-1build1) ... 181s Setting up python3-pyqt5.qtsvg (5.15.11+dfsg-1build1) ... 181s Setting up python3-pyqt5.qttexttospeech (5.15.11+dfsg-1build1) ... 181s Setting up python3-pyqt5.qtsql (5.15.11+dfsg-1build1) ... 181s Setting up python3-pyqt5.qtopengl (5.15.11+dfsg-1build1) ... 181s Setting up python3-pyqt5.qtmultimedia (5.15.11+dfsg-1build1) ... 181s Setting up python3-pyqt5.qtchart (5.15.7+dfsg-1) ... 181s Setting up python3-pyqt5.qtxmlpatterns (5.15.11+dfsg-1build1) ... 181s Setting up python3-pyqt5.qtsensors (5.15.11+dfsg-1build1) ... 181s Setting up python3-pyqt5.qtwebsockets (5.15.11+dfsg-1build1) ... 181s Setting up python3-pyqt5.qtserialport (5.15.11+dfsg-1build1) ... 181s Setting up python3-pyqt5.qtremoteobjects (5.15.11+dfsg-1build1) ... 181s Setting up python3-pyqt5.qtwebchannel (5.15.11+dfsg-1build1) ... 181s Setting up python3-pyqt5.qtwebkit (5.15.11+dfsg-1build1) ... 181s Setting up python3-pymol (3.0.0+dfsg-1build1) ... 182s Setting up python3-pyqt5.qtquick (5.15.11+dfsg-1build1) ... 182s Setting up python3-qtpy (2.4.2-4) ... 182s Setting up python3-qtconsole (5.6.1-2) ... 182s Setting up adwaita-icon-theme (47.0-2) ... 182s update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode 182s Setting up python3-ufolib2 (0.17.0+dfsg1-1) ... 183s Setting up python3-fonttools (4.55.0-3) ... 184s Setting up humanity-icon-theme (0.6.16) ... 184s Setting up python3-matplotlib (3.8.3-3ubuntu1) ... 186s Setting up ubuntu-mono (24.04-0ubuntu1) ... 186s Setting up python3-fabio (2024.4.0-2build1) ... 187s Setting up python3-silx (2.1.2+dfsg-1build1) ... 189s Setting up python3-pyfai (2024.05-3build1) ... 190s /usr/lib/python3/dist-packages/pyFAI/method_registry.py:385: SyntaxWarning: invalid escape sequence '\ ' 190s """Constructor of the class, registering the methods. 190s /usr/lib/python3/dist-packages/pyFAI/opencl/preproc.py:514: SyntaxWarning: invalid escape sequence '\*' 190s """Common preprocessing step, implemented using OpenCL. May be inefficient 190s /usr/lib/python3/dist-packages/pyFAI/method_registry.py:385: SyntaxWarning: invalid escape sequence '\ ' 190s """Constructor of the class, registering the methods. 190s /usr/lib/python3/dist-packages/pyFAI/opencl/preproc.py:514: SyntaxWarning: invalid escape sequence '\*' 190s """Common preprocessing step, implemented using OpenCL. May be inefficient 190s Processing triggers for libc-bin (2.40-4ubuntu1) ... 190s Processing triggers for systemd (257-2ubuntu1) ... 190s Processing triggers for man-db (2.13.0-1) ... 192s Processing triggers for libglib2.0-0t64:amd64 (2.82.4-1) ... 192s Setting up libgtk-3-0t64:amd64 (3.24.43-4ubuntu1) ... 192s Processing triggers for udev (257-2ubuntu1) ... 192s Setting up libwxgtk3.2-1t64:amd64 (3.2.6+dfsg-2ubuntu1) ... 192s Setting up libwxgtk-gl3.2-1t64:amd64 (3.2.6+dfsg-2ubuntu1) ... 192s Setting up python3-wxgtk4.0 (4.2.2+dfsg-1build1) ... 194s Setting up python3-cctbx (2024.10+ds2+~3.22.1+ds1-4) ... 197s /usr/lib/python3/dist-packages/iotbx/pdb/utils.py:8: SyntaxWarning: invalid escape sequence '\{' 197s """ Iterator to generate strings of length n_chars, using upper-case, 197s /usr/lib/python3/dist-packages/iotbx/pdb/utils.py:46: SyntaxWarning: invalid escape sequence '\/' 197s special_characters = """[]_,.;:"&<>()\/\{}'`~!@#$%*|+-""" 205s /usr/lib/python3/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:724: SyntaxWarning: invalid escape sequence '\o' 205s width=pairwise_differences_db, label='$\omega_{hkl}$' 205s /usr/lib/python3/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:739: SyntaxWarning: invalid escape sequence '\o' 205s axes[0].set_ylabel('Distribution of $\omega_{hbk}$') 205s /usr/lib/python3/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:740: SyntaxWarning: invalid escape sequence '\o' 205s axes[0].set_xlabel('Normalized PD ($\omega_{hbk}$)') 205s /usr/lib/python3/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:759: SyntaxWarning: invalid escape sequence '\o' 205s axes[1].set_xlabel('Sorted Normalized PD ($\omega_{hbk}$)') 205s /usr/lib/python3/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:778: SyntaxWarning: invalid escape sequence '\s' 205s axes[2].set_ylabel('Standard Deviation of $I_{hbk}/\sigma_{hbk}$') 205s /usr/lib/python3/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:807: SyntaxWarning: invalid escape sequence '\m' 205s axes_sadd.set_ylabel('$s_{\mathrm{fac}}^2 \\times s_{\mathrm{add}}^2$') 207s /usr/lib/python3/dist-packages/iotbx/pdb/utils.py:8: SyntaxWarning: invalid escape sequence '\{' 207s """ Iterator to generate strings of length n_chars, using upper-case, 207s /usr/lib/python3/dist-packages/iotbx/pdb/utils.py:46: SyntaxWarning: invalid escape sequence '\/' 207s special_characters = """[]_,.;:"&<>()\/\{}'`~!@#$%*|+-""" 215s /usr/lib/python3/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:724: SyntaxWarning: invalid escape sequence '\o' 215s width=pairwise_differences_db, label='$\omega_{hkl}$' 215s /usr/lib/python3/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:739: SyntaxWarning: invalid escape sequence '\o' 215s axes[0].set_ylabel('Distribution of $\omega_{hbk}$') 215s /usr/lib/python3/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:740: SyntaxWarning: invalid escape sequence '\o' 215s axes[0].set_xlabel('Normalized PD ($\omega_{hbk}$)') 215s /usr/lib/python3/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:759: SyntaxWarning: invalid escape sequence '\o' 215s axes[1].set_xlabel('Sorted Normalized PD ($\omega_{hbk}$)') 215s /usr/lib/python3/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:778: SyntaxWarning: invalid escape sequence '\s' 215s axes[2].set_ylabel('Standard Deviation of $I_{hbk}/\sigma_{hbk}$') 215s /usr/lib/python3/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:807: SyntaxWarning: invalid escape sequence '\m' 215s axes_sadd.set_ylabel('$s_{\mathrm{fac}}^2 \\times s_{\mathrm{add}}^2$') 215s Setting up python3-dials (3.22.1+dfsg3-1) ... 217s Setting up dials (3.22.1+dfsg3-1) ... 217s Processing triggers for libc-bin (2.40-4ubuntu1) ... 218s autopkgtest [13:24:24]: test command1: set -efu ; for py in $(py3versions -r 2>/dev/null) ; do cp -r tests conftest.py "$AUTOPKGTEST_TMP" || true ; cd "$AUTOPKGTEST_TMP" ; echo "Testing dials with $py:" ; DIALS_DATA="$AUTOPKGTEST_TMP" $py -m pytest --verbosity=2 ; done 218s autopkgtest [13:24:24]: test command1: [----------------------- 218s Testing dials with python3.13: 219s ============================= test session starts ============================== 219s platform linux -- Python 3.13.1, pytest-8.3.4, pluggy-1.5.0 -- /usr/bin/python3.13 219s cachedir: .pytest_cache 219s rootdir: /tmp/autopkgtest.bRtviZ/autopkgtest_tmp 219s plugins: mock-3.14.0, typeguard-4.4.1, xdist-3.6.1, dials-data-2.4.0 227s collecting ... collected 1272 items / 10 errors 227s 227s ==================================== ERRORS ==================================== 227s _ ERROR collecting tests/algorithms/indexing/lattice_search/test_lattice_search.py _ 227s ImportError while importing test module '/tmp/autopkgtest.bRtviZ/autopkgtest_tmp/tests/algorithms/indexing/lattice_search/test_lattice_search.py'. 227s Hint: make sure your test modules/packages have valid Python names. 227s Traceback: 227s /usr/lib/python3/dist-packages/_pytest/python.py:493: in importtestmodule 227s mod = import_path( 227s /usr/lib/python3/dist-packages/_pytest/pathlib.py:587: in import_path 227s importlib.import_module(module_name) 227s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 227s return _bootstrap._gcd_import(name[level:], package, level) 227s :1387: in _gcd_import 227s ??? 227s :1360: in _find_and_load 227s ??? 227s :1331: in _find_and_load_unlocked 227s ??? 227s :935: in _load_unlocked 227s ??? 227s /usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py:184: in exec_module 227s exec(co, module.__dict__) 227s tests/algorithms/indexing/lattice_search/test_lattice_search.py:10: in 227s from dials.algorithms.indexing import lattice_search, stills_indexer 227s /usr/lib/python3/dist-packages/dials/algorithms/indexing/lattice_search/__init__.py:19: in 227s from .pinkindexer import PinkIndexer 227s /usr/lib/python3/dist-packages/dials/algorithms/indexing/lattice_search/pinkindexer.py:5: in 227s import gemmi 227s E ModuleNotFoundError: No module named 'gemmi' 227s _______ ERROR collecting tests/algorithms/merging/test_french_wilson.py ________ 227s ImportError while importing test module '/tmp/autopkgtest.bRtviZ/autopkgtest_tmp/tests/algorithms/merging/test_french_wilson.py'. 227s Hint: make sure your test modules/packages have valid Python names. 227s Traceback: 227s /usr/lib/python3/dist-packages/_pytest/python.py:493: in importtestmodule 227s mod = import_path( 227s /usr/lib/python3/dist-packages/_pytest/pathlib.py:587: in import_path 227s importlib.import_module(module_name) 227s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 227s return _bootstrap._gcd_import(name[level:], package, level) 227s :1387: in _gcd_import 227s ??? 227s :1360: in _find_and_load 227s ??? 227s :1331: in _find_and_load_unlocked 227s ??? 227s :935: in _load_unlocked 227s ??? 227s /usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py:184: in exec_module 227s exec(co, module.__dict__) 227s tests/algorithms/merging/test_french_wilson.py:8: in 227s from dials.algorithms.merging import french_wilson, merge 227s /usr/lib/python3/dist-packages/dials/algorithms/merging/merge.py:49: in 227s from dials.util.export_mtz import MADMergedMTZWriter, MergedMTZWriter 227s /usr/lib/python3/dist-packages/dials/util/export_mtz.py:12: in 227s import gemmi 227s E ModuleNotFoundError: No module named 'gemmi' 227s ___________ ERROR collecting tests/algorithms/merging/test_merge.py ____________ 227s ImportError while importing test module '/tmp/autopkgtest.bRtviZ/autopkgtest_tmp/tests/algorithms/merging/test_merge.py'. 227s Hint: make sure your test modules/packages have valid Python names. 227s Traceback: 227s /usr/lib/python3/dist-packages/_pytest/python.py:493: in importtestmodule 227s mod = import_path( 227s /usr/lib/python3/dist-packages/_pytest/pathlib.py:587: in import_path 227s importlib.import_module(module_name) 227s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 227s return _bootstrap._gcd_import(name[level:], package, level) 227s :1387: in _gcd_import 227s ??? 227s :1360: in _find_and_load 227s ??? 227s :1331: in _find_and_load_unlocked 227s ??? 227s :935: in _load_unlocked 227s ??? 227s /usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py:184: in exec_module 227s exec(co, module.__dict__) 227s tests/algorithms/merging/test_merge.py:8: in 227s from dials.algorithms.merging.merge import ( 227s /usr/lib/python3/dist-packages/dials/algorithms/merging/merge.py:49: in 227s from dials.util.export_mtz import MADMergedMTZWriter, MergedMTZWriter 227s /usr/lib/python3/dist-packages/dials/util/export_mtz.py:12: in 227s import gemmi 227s E ModuleNotFoundError: No module named 'gemmi' 227s ___________ ERROR collecting tests/algorithms/scaling/test_scale.py ____________ 227s ImportError while importing test module '/tmp/autopkgtest.bRtviZ/autopkgtest_tmp/tests/algorithms/scaling/test_scale.py'. 227s Hint: make sure your test modules/packages have valid Python names. 227s Traceback: 227s /usr/lib/python3/dist-packages/_pytest/python.py:493: in importtestmodule 227s mod = import_path( 227s /usr/lib/python3/dist-packages/_pytest/pathlib.py:587: in import_path 227s importlib.import_module(module_name) 227s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 227s return _bootstrap._gcd_import(name[level:], package, level) 227s :1387: in _gcd_import 227s ??? 227s :1360: in _find_and_load 227s ??? 227s :1331: in _find_and_load_unlocked 227s ??? 227s :935: in _load_unlocked 227s ??? 227s /usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py:184: in exec_module 227s exec(co, module.__dict__) 227s tests/algorithms/scaling/test_scale.py:22: in 227s from dials.algorithms.scaling.algorithm import ScalingAlgorithm, prepare_input 227s /usr/lib/python3/dist-packages/dials/algorithms/scaling/algorithm.py:37: in 227s from dials.command_line.cosym import cosym 227s /usr/lib/python3/dist-packages/dials/command_line/cosym.py:20: in 227s from dials.command_line.symmetry import ( 227s /usr/lib/python3/dist-packages/dials/command_line/symmetry.py:19: in 227s from dials.algorithms.merging.merge import prepare_merged_reflection_table 227s /usr/lib/python3/dist-packages/dials/algorithms/merging/merge.py:49: in 227s from dials.util.export_mtz import MADMergedMTZWriter, MergedMTZWriter 227s /usr/lib/python3/dist-packages/dials/util/export_mtz.py:12: in 227s import gemmi 227s E ModuleNotFoundError: No module named 'gemmi' 227s ______________ ERROR collecting tests/command_line/test_cosym.py _______________ 227s ImportError while importing test module '/tmp/autopkgtest.bRtviZ/autopkgtest_tmp/tests/command_line/test_cosym.py'. 227s Hint: make sure your test modules/packages have valid Python names. 227s Traceback: 227s /usr/lib/python3/dist-packages/_pytest/python.py:493: in importtestmodule 227s mod = import_path( 227s /usr/lib/python3/dist-packages/_pytest/pathlib.py:587: in import_path 227s importlib.import_module(module_name) 227s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 227s return _bootstrap._gcd_import(name[level:], package, level) 227s :1387: in _gcd_import 227s ??? 227s :1360: in _find_and_load 227s ??? 227s :1331: in _find_and_load_unlocked 227s ??? 227s :935: in _load_unlocked 227s ??? 227s /usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py:184: in exec_module 227s exec(co, module.__dict__) 227s tests/command_line/test_cosym.py:11: in 227s import dials.command_line.cosym as dials_cosym 227s /usr/lib/python3/dist-packages/dials/command_line/cosym.py:20: in 227s from dials.command_line.symmetry import ( 227s /usr/lib/python3/dist-packages/dials/command_line/symmetry.py:19: in 227s from dials.algorithms.merging.merge import prepare_merged_reflection_table 227s /usr/lib/python3/dist-packages/dials/algorithms/merging/merge.py:49: in 227s from dials.util.export_mtz import MADMergedMTZWriter, MergedMTZWriter 227s /usr/lib/python3/dist-packages/dials/util/export_mtz.py:12: in 227s import gemmi 227s E ModuleNotFoundError: No module named 'gemmi' 227s _________ ERROR collecting tests/command_line/test_damage_analysis.py __________ 227s ImportError while importing test module '/tmp/autopkgtest.bRtviZ/autopkgtest_tmp/tests/command_line/test_damage_analysis.py'. 227s Hint: make sure your test modules/packages have valid Python names. 227s Traceback: 227s /usr/lib/python3/dist-packages/_pytest/python.py:493: in importtestmodule 227s mod = import_path( 227s /usr/lib/python3/dist-packages/_pytest/pathlib.py:587: in import_path 227s importlib.import_module(module_name) 227s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 227s return _bootstrap._gcd_import(name[level:], package, level) 227s :1387: in _gcd_import 227s ??? 227s :1360: in _find_and_load 227s ??? 227s :1331: in _find_and_load_unlocked 227s ??? 227s :935: in _load_unlocked 227s ??? 227s /usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py:184: in exec_module 227s exec(co, module.__dict__) 227s tests/command_line/test_damage_analysis.py:12: in 227s from dials.command_line.damage_analysis import PychefRunner, phil_scope, run 227s /usr/lib/python3/dist-packages/dials/command_line/damage_analysis.py:48: in 227s from dials.command_line.symmetry import median_unit_cell 227s /usr/lib/python3/dist-packages/dials/command_line/symmetry.py:19: in 227s from dials.algorithms.merging.merge import prepare_merged_reflection_table 227s /usr/lib/python3/dist-packages/dials/algorithms/merging/merge.py:49: in 227s from dials.util.export_mtz import MADMergedMTZWriter, MergedMTZWriter 227s /usr/lib/python3/dist-packages/dials/util/export_mtz.py:12: in 227s import gemmi 227s E ModuleNotFoundError: No module named 'gemmi' 227s ______________ ERROR collecting tests/command_line/test_export.py ______________ 227s ImportError while importing test module '/tmp/autopkgtest.bRtviZ/autopkgtest_tmp/tests/command_line/test_export.py'. 227s Hint: make sure your test modules/packages have valid Python names. 227s Traceback: 227s /usr/lib/python3/dist-packages/_pytest/python.py:493: in importtestmodule 227s mod = import_path( 227s /usr/lib/python3/dist-packages/_pytest/pathlib.py:587: in import_path 227s importlib.import_module(module_name) 227s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 227s return _bootstrap._gcd_import(name[level:], package, level) 227s :1387: in _gcd_import 227s ??? 227s :1360: in _find_and_load 227s ??? 227s :1331: in _find_and_load_unlocked 227s ??? 227s :935: in _load_unlocked 227s ??? 227s /usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py:184: in exec_module 227s exec(co, module.__dict__) 227s tests/command_line/test_export.py:8: in 227s import gemmi 227s E ModuleNotFoundError: No module named 'gemmi' 227s ____________ ERROR collecting tests/command_line/test_ssx_index.py _____________ 227s ImportError while importing test module '/tmp/autopkgtest.bRtviZ/autopkgtest_tmp/tests/command_line/test_ssx_index.py'. 227s Hint: make sure your test modules/packages have valid Python names. 227s Traceback: 227s /usr/lib/python3/dist-packages/libtbx/utils.py:1613: in __init__ 227s try: module = __import__(module_path) 227s /usr/lib/python3/dist-packages/dials/algorithms/indexing/lattice_search/__init__.py:19: in 227s from .pinkindexer import PinkIndexer 227s /usr/lib/python3/dist-packages/dials/algorithms/indexing/lattice_search/pinkindexer.py:5: in 227s import gemmi 227s E ModuleNotFoundError: No module named 'gemmi' 227s 227s During handling of the above exception, another exception occurred: 227s /usr/lib/python3/dist-packages/libtbx/utils.py:1613: in __init__ 227s try: module = __import__(module_path) 227s /usr/lib/python3/dist-packages/dials/command_line/index.py:57: in 227s phil_scope = iotbx.phil.parse( 227s /usr/lib/python3/dist-packages/iotbx/phil.py:79: in parse 227s return libtbx.phil.parse( 227s /usr/lib/python3/dist-packages/libtbx/phil/__init__.py:2197: in parse 227s result = result.process_includes( 227s /usr/lib/python3/dist-packages/libtbx/phil/__init__.py:2004: in process_includes 227s result.append(object.process_includes( 227s /usr/lib/python3/dist-packages/libtbx/phil/__init__.py:1994: in process_includes 227s result.extend(process_include_scope( 227s /usr/lib/python3/dist-packages/libtbx/phil/__init__.py:2037: in process_include_scope 227s imported = import_python_object( 227s /usr/lib/python3/dist-packages/libtbx/utils.py:1615: in __init__ 227s raise ImportError("%sno module %s%s or possibly import errors in " 227s E ImportError: include scope: no module dials.algorithms.indexing.lattice_search (input line 5) or possibly import errors in module dials.algorithms.indexing.lattice_search 227s 227s During handling of the above exception, another exception occurred: 227s /usr/lib/python3/dist-packages/_pytest/python.py:493: in importtestmodule 227s mod = import_path( 227s /usr/lib/python3/dist-packages/_pytest/pathlib.py:587: in import_path 227s importlib.import_module(module_name) 227s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 227s return _bootstrap._gcd_import(name[level:], package, level) 227s :1387: in _gcd_import 227s ??? 227s :1360: in _find_and_load 227s ??? 227s :1331: in _find_and_load_unlocked 227s ??? 227s :935: in _load_unlocked 227s ??? 227s /usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py:184: in exec_module 227s exec(co, module.__dict__) 227s tests/command_line/test_ssx_index.py:13: in 227s from dials.command_line.ssx_index import run 227s /usr/lib/python3/dist-packages/dials/command_line/ssx_index.py:80: in 227s phil_scope = phil.parse( 227s /usr/lib/python3/dist-packages/libtbx/phil/__init__.py:2197: in parse 227s result = result.process_includes( 227s /usr/lib/python3/dist-packages/libtbx/phil/__init__.py:1994: in process_includes 227s result.extend(process_include_scope( 227s /usr/lib/python3/dist-packages/libtbx/phil/__init__.py:2037: in process_include_scope 227s imported = import_python_object( 227s /usr/lib/python3/dist-packages/libtbx/utils.py:1615: in __init__ 227s raise ImportError("%sno module %s%s or possibly import errors in " 227s E ImportError: include scope: no module dials.command_line.index (input line 20) or possibly import errors in module dials.command_line.index 227s __________ ERROR collecting tests/command_line/test_stills_process.py __________ 227s ImportError while importing test module '/tmp/autopkgtest.bRtviZ/autopkgtest_tmp/tests/command_line/test_stills_process.py'. 227s Hint: make sure your test modules/packages have valid Python names. 227s Traceback: 227s /usr/lib/python3/dist-packages/libtbx/utils.py:1613: in __init__ 227s try: module = __import__(module_path) 227s /usr/lib/python3/dist-packages/dials/algorithms/indexing/lattice_search/__init__.py:19: in 227s from .pinkindexer import PinkIndexer 227s /usr/lib/python3/dist-packages/dials/algorithms/indexing/lattice_search/pinkindexer.py:5: in 227s import gemmi 227s E ModuleNotFoundError: No module named 'gemmi' 227s 227s During handling of the above exception, another exception occurred: 227s /usr/lib/python3/dist-packages/_pytest/python.py:493: in importtestmodule 227s mod = import_path( 227s /usr/lib/python3/dist-packages/_pytest/pathlib.py:587: in import_path 227s importlib.import_module(module_name) 227s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 227s return _bootstrap._gcd_import(name[level:], package, level) 227s :1387: in _gcd_import 227s ??? 227s :1360: in _find_and_load 227s ??? 227s :1331: in _find_and_load_unlocked 227s ??? 227s :935: in _load_unlocked 227s ??? 227s /usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py:184: in exec_module 227s exec(co, module.__dict__) 227s tests/command_line/test_stills_process.py:17: in 227s from dials.command_line.stills_process import Processor, phil_scope 227s /usr/lib/python3/dist-packages/dials/command_line/stills_process.py:343: in 227s phil_scope = parse(control_phil_str + dials_phil_str, process_includes=True).fetch( 227s /usr/lib/python3/dist-packages/libtbx/phil/__init__.py:2197: in parse 227s result = result.process_includes( 227s /usr/lib/python3/dist-packages/libtbx/phil/__init__.py:2004: in process_includes 227s result.append(object.process_includes( 227s /usr/lib/python3/dist-packages/libtbx/phil/__init__.py:1994: in process_includes 227s result.extend(process_include_scope( 227s /usr/lib/python3/dist-packages/libtbx/phil/__init__.py:2037: in process_include_scope 227s imported = import_python_object( 227s /usr/lib/python3/dist-packages/libtbx/utils.py:1615: in __init__ 227s raise ImportError("%sno module %s%s or possibly import errors in " 227s E ImportError: include scope: no module dials.algorithms.indexing.lattice_search (input line 158) or possibly import errors in module dials.algorithms.indexing.lattice_search 227s _____________ ERROR collecting tests/command_line/test_symmetry.py _____________ 227s ImportError while importing test module '/tmp/autopkgtest.bRtviZ/autopkgtest_tmp/tests/command_line/test_symmetry.py'. 227s Hint: make sure your test modules/packages have valid Python names. 227s Traceback: 227s /usr/lib/python3/dist-packages/_pytest/python.py:493: in importtestmodule 227s mod = import_path( 227s /usr/lib/python3/dist-packages/_pytest/pathlib.py:587: in import_path 227s importlib.import_module(module_name) 227s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 227s return _bootstrap._gcd_import(name[level:], package, level) 227s :1387: in _gcd_import 227s ??? 227s :1360: in _find_and_load 227s ??? 227s :1331: in _find_and_load_unlocked 227s ??? 227s :935: in _load_unlocked 227s ??? 227s /usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py:184: in exec_module 227s exec(co, module.__dict__) 227s tests/command_line/test_symmetry.py:19: in 227s from dials.command_line import symmetry 227s /usr/lib/python3/dist-packages/dials/command_line/symmetry.py:19: in 227s from dials.algorithms.merging.merge import prepare_merged_reflection_table 227s /usr/lib/python3/dist-packages/dials/algorithms/merging/merge.py:49: in 227s from dials.util.export_mtz import MADMergedMTZWriter, MergedMTZWriter 227s /usr/lib/python3/dist-packages/dials/util/export_mtz.py:12: in 227s import gemmi 227s E ModuleNotFoundError: No module named 'gemmi' 227s =============================== warnings summary =============================== 227s ../../../usr/lib/python3/dist-packages/dials/extensions/__init__.py:3 227s /usr/lib/python3/dist-packages/dials/extensions/__init__.py:3: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html 227s import pkg_resources 227s 227s ../../../usr/lib/python3/dist-packages/pytools/persistent_dict.py:63 227s /usr/lib/python3/dist-packages/pytools/persistent_dict.py:63: RecommendedHashNotFoundWarning: Unable to import recommended hash 'siphash24.siphash13', falling back to 'hashlib.sha256'. Run 'python3 -m pip install siphash24' to install the recommended hash. 227s warn("Unable to import recommended hash 'siphash24.siphash13', " 227s 227s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 227s =========================== short test summary info ============================ 227s ERROR tests/algorithms/indexing/lattice_search/test_lattice_search.py 227s ERROR tests/algorithms/merging/test_french_wilson.py 227s ERROR tests/algorithms/merging/test_merge.py 227s ERROR tests/algorithms/scaling/test_scale.py 227s ERROR tests/command_line/test_cosym.py 227s ERROR tests/command_line/test_damage_analysis.py 227s ERROR tests/command_line/test_export.py 227s ERROR tests/command_line/test_ssx_index.py 227s ERROR tests/command_line/test_stills_process.py 227s ERROR tests/command_line/test_symmetry.py 227s !!!!!!!!!!!!!!!!!!! Interrupted: 10 errors during collection !!!!!!!!!!!!!!!!!!! 227s ======================== 2 warnings, 10 errors in 8.02s ======================== 228s autopkgtest [13:24:34]: test command1: -----------------------] 229s command1 FAIL non-zero exit status 2 229s autopkgtest [13:24:35]: test command1: - - - - - - - - - - results - - - - - - - - - - 229s autopkgtest [13:24:35]: @@@@@@@@@@@@@@@@@@@@ summary 229s command1 FAIL non-zero exit status 2 245s nova [W] Skipping flock for amd64 245s Creating nova instance adt-plucky-amd64-dials-20250111-132046-juju-7f2275-prod-proposed-migration-environment-2-41b69e62-837c-4886-96ad-70aee82e5e23 from image adt/ubuntu-plucky-amd64-server-20250111.img (UUID 583b1e24-63f4-4305-9a48-aa6a34658dc0)... 245s nova [W] Timed out waiting for 34389e12-8149-4fb7-ab09-35ee123505f0 to get deleted.