0s autopkgtest [09:15:45]: starting date and time: 2024-11-13 09:15:45+0000 0s autopkgtest [09:15:45]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [09:15:45]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.bnpc89p1/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade bitshuffle --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@lcy02-45.secgroup --name adt-plucky-amd64-bitshuffle-20241113-080641-juju-7f2275-prod-proposed-migration-environment-20-79383001-143a-4bc8-a9b5-ec93f683d70b --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 65s autopkgtest [09:16:50]: testbed dpkg architecture: amd64 65s autopkgtest [09:16:50]: testbed apt version: 2.9.8 65s autopkgtest [09:16:50]: @@@@@@@@@@@@@@@@@@@@ test bed setup 66s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 66s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [849 kB] 66s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 66s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB] 66s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB] 66s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [65.2 kB] 66s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [111 kB] 66s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [32.6 kB] 66s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [637 kB] 66s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [255 kB] 66s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [37.7 kB] 66s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [13.0 kB] 66s Fetched 2173 kB in 1s (4241 kB/s) 66s Reading package lists... 68s Reading package lists... 68s Building dependency tree... 68s Reading state information... 68s Calculating upgrade... 69s The following NEW packages will be installed: 69s python3.13-gdbm 69s The following packages will be upgraded: 69s libgpgme11t64 libpython3-stdlib python3 python3-gdbm python3-minimal 69s 5 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 69s Need to get 253 kB of archives. 69s After this operation, 147 kB of additional disk space will be used. 69s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-minimal amd64 3.12.7-1 [27.4 kB] 69s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3 amd64 3.12.7-1 [24.0 kB] 69s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpython3-stdlib amd64 3.12.7-1 [10.0 kB] 69s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-gdbm amd64 3.13.0-2 [31.3 kB] 69s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-gdbm amd64 3.12.7-1 [8642 B] 69s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libgpgme11t64 amd64 1.23.2-5ubuntu4 [152 kB] 69s Fetched 253 kB in 0s (1515 kB/s) 69s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75541 files and directories currently installed.) 70s Preparing to unpack .../python3-minimal_3.12.7-1_amd64.deb ... 70s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 70s Setting up python3-minimal (3.12.7-1) ... 70s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75541 files and directories currently installed.) 70s Preparing to unpack .../python3_3.12.7-1_amd64.deb ... 70s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 70s Preparing to unpack .../libpython3-stdlib_3.12.7-1_amd64.deb ... 70s Unpacking libpython3-stdlib:amd64 (3.12.7-1) over (3.12.6-0ubuntu1) ... 70s Selecting previously unselected package python3.13-gdbm. 70s Preparing to unpack .../python3.13-gdbm_3.13.0-2_amd64.deb ... 70s Unpacking python3.13-gdbm (3.13.0-2) ... 70s Preparing to unpack .../python3-gdbm_3.12.7-1_amd64.deb ... 70s Unpacking python3-gdbm:amd64 (3.12.7-1) over (3.12.6-1ubuntu1) ... 70s Preparing to unpack .../libgpgme11t64_1.23.2-5ubuntu4_amd64.deb ... 70s Unpacking libgpgme11t64:amd64 (1.23.2-5ubuntu4) over (1.18.0-4.1ubuntu4) ... 70s Setting up libgpgme11t64:amd64 (1.23.2-5ubuntu4) ... 70s Setting up python3.13-gdbm (3.13.0-2) ... 70s Setting up libpython3-stdlib:amd64 (3.12.7-1) ... 70s Setting up python3 (3.12.7-1) ... 70s Setting up python3-gdbm:amd64 (3.12.7-1) ... 70s Processing triggers for man-db (2.12.1-3) ... 71s Processing triggers for libc-bin (2.40-1ubuntu3) ... 71s Reading package lists... 71s Building dependency tree... 71s Reading state information... 72s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 72s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 72s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 72s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 72s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 73s Reading package lists... 73s Reading package lists... 73s Building dependency tree... 73s Reading state information... 74s Calculating upgrade... 74s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 74s Reading package lists... 74s Building dependency tree... 74s Reading state information... 74s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 75s autopkgtest [09:17:00]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 13:41:20 UTC 2024 75s autopkgtest [09:17:00]: @@@@@@@@@@@@@@@@@@@@ apt-source bitshuffle 76s Get:1 http://ftpmaster.internal/ubuntu plucky/universe bitshuffle 0.5.1-2 (dsc) [2643 B] 76s Get:2 http://ftpmaster.internal/ubuntu plucky/universe bitshuffle 0.5.1-2 (tar) [190 kB] 76s Get:3 http://ftpmaster.internal/ubuntu plucky/universe bitshuffle 0.5.1-2 (diff) [8104 B] 76s gpgv: Signature made Sun Sep 22 08:35:17 2024 UTC 76s gpgv: using RSA key D9B453B799B8830D945E6A0A5BF54E5E12B900BB 76s gpgv: issuer "picca@debian.org" 76s gpgv: Can't check signature: No public key 76s dpkg-source: warning: cannot verify inline signature for ./bitshuffle_0.5.1-2.dsc: no acceptable signature found 76s autopkgtest [09:17:01]: testing package bitshuffle version 0.5.1-2 76s autopkgtest [09:17:01]: build not needed 76s autopkgtest [09:17:01]: test command1: preparing testbed 77s Reading package lists... 77s Building dependency tree... 77s Reading state information... 78s Starting pkgProblemResolver with broken count: 0 78s Starting 2 pkgProblemResolver with broken count: 0 78s Done 78s The following additional packages will be installed: 78s bitshuffle libaec0 libamd-comgr2 libamdhip64-5 libblas3 libdrm-amdgpu1 78s libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 libgomp1 libhdf5-103-1t64 78s libhdf5-hl-100t64 libhdf5-openmpi-103-1t64 libhsa-runtime64-1 libhsakmt1 78s libhwloc-plugins libhwloc15 libibmad5 libibumad3 liblapack3 libllvm17t64 78s liblzf1 libmunge2 libopenmpi3t64 libpciaccess0 libpmix2t64 78s libpsm-infinipath1 libpsm2-2 librdmacm1t64 libsz2 libucx0 libxnvctrl0 78s ocl-icd-libopencl1 python3-h5py python3-h5py-serial python3-numpy 78s Suggested packages: 78s libhwloc-contrib-plugins opencl-icd python-h5py-doc gcc gfortran 78s python-numpy-doc python3-dev python3-pytest 78s The following NEW packages will be installed: 78s autopkgtest-satdep bitshuffle libaec0 libamd-comgr2 libamdhip64-5 libblas3 78s libdrm-amdgpu1 libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 libgomp1 78s libhdf5-103-1t64 libhdf5-hl-100t64 libhdf5-openmpi-103-1t64 78s libhsa-runtime64-1 libhsakmt1 libhwloc-plugins libhwloc15 libibmad5 78s libibumad3 liblapack3 libllvm17t64 liblzf1 libmunge2 libopenmpi3t64 78s libpciaccess0 libpmix2t64 libpsm-infinipath1 libpsm2-2 librdmacm1t64 libsz2 78s libucx0 libxnvctrl0 ocl-icd-libopencl1 python3-h5py python3-h5py-serial 78s python3-numpy 78s 0 upgraded, 37 newly installed, 0 to remove and 0 not upgraded. 78s Need to get 68.9 MB/68.9 MB of archives. 78s After this operation, 283 MB of additional disk space will be used. 78s Get:1 /tmp/autopkgtest.BUxvby/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [716 B] 78s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-3build2 [247 kB] 78s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-8ubuntu1 [909 kB] 78s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-3build2 [2668 kB] 79s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-numpy amd64 1:1.26.4+ds-11build1 [4479 kB] 79s Get:6 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 79s Get:7 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 79s Get:8 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-103-1t64 amd64 1.10.10+repack-4ubuntu3 [1280 kB] 79s Get:9 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-4ubuntu3 [56.6 kB] 79s Get:10 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblzf1 amd64 3.6-4 [7624 B] 79s Get:11 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-h5py-serial amd64 3.11.0-5ubuntu1 [1107 kB] 79s Get:12 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-h5py all 3.11.0-5ubuntu1 [7974 B] 79s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-8ubuntu1 [148 kB] 79s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10 [7966 B] 79s Get:15 http://ftpmaster.internal/ubuntu plucky/universe amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.3build1 [178 kB] 79s Get:16 http://ftpmaster.internal/ubuntu plucky/universe amd64 libpsm2-2 amd64 11.2.185-2.1 [193 kB] 79s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 librdmacm1t64 amd64 52.0-2ubuntu1 [70.8 kB] 79s Get:18 http://ftpmaster.internal/ubuntu plucky/universe amd64 libfabric1 amd64 1.17.0-3ubuntu1 [658 kB] 79s Get:19 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhwloc15 amd64 2.11.2-1 [193 kB] 79s Get:20 http://ftpmaster.internal/ubuntu plucky/universe amd64 libmunge2 amd64 0.5.15-4build1 [14.7 kB] 79s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libpciaccess0 amd64 0.17-3build1 [18.6 kB] 79s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libxnvctrl0 amd64 510.47.03-0ubuntu4 [12.6 kB] 79s Get:23 http://ftpmaster.internal/ubuntu plucky/universe amd64 ocl-icd-libopencl1 amd64 2.3.2-1build1 [38.5 kB] 79s Get:24 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhwloc-plugins amd64 2.11.2-1 [16.0 kB] 79s Get:25 http://ftpmaster.internal/ubuntu plucky/universe amd64 libpmix2t64 amd64 5.0.3-2 [697 kB] 79s Get:26 http://ftpmaster.internal/ubuntu plucky/universe amd64 libllvm17t64 amd64 1:17.0.6-18 [26.0 MB] 81s Get:27 http://ftpmaster.internal/ubuntu plucky/universe amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3build2 [14.4 MB] 82s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libdrm-amdgpu1 amd64 2.4.123-1 [21.7 kB] 82s Get:29 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhsakmt1 amd64 5.7.0-1build1 [62.9 kB] 82s Get:30 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhsa-runtime64-1 amd64 5.7.1-2build1 [491 kB] 82s Get:31 http://ftpmaster.internal/ubuntu plucky/universe amd64 libamdhip64-5 amd64 5.7.1-5 [9643 kB] 82s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libibumad3 amd64 52.0-2ubuntu1 [29.0 kB] 82s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libibmad5 amd64 52.0-2ubuntu1 [42.6 kB] 82s Get:34 http://ftpmaster.internal/ubuntu plucky/universe amd64 libucx0 amd64 1.17.0+ds-3build1 [1162 kB] 82s Get:35 http://ftpmaster.internal/ubuntu plucky/universe amd64 libopenmpi3t64 amd64 4.1.6-13.3ubuntu2 [2575 kB] 82s Get:36 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-openmpi-103-1t64 amd64 1.10.10+repack-4ubuntu3 [1337 kB] 83s Get:37 http://ftpmaster.internal/ubuntu plucky/universe amd64 bitshuffle amd64 0.5.1-2 [144 kB] 83s Fetched 68.9 MB in 4s (15.4 MB/s) 83s Selecting previously unselected package libblas3:amd64. 83s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75548 files and directories currently installed.) 83s Preparing to unpack .../00-libblas3_3.12.0-3build2_amd64.deb ... 83s Unpacking libblas3:amd64 (3.12.0-3build2) ... 83s Selecting previously unselected package libgfortran5:amd64. 83s Preparing to unpack .../01-libgfortran5_14.2.0-8ubuntu1_amd64.deb ... 83s Unpacking libgfortran5:amd64 (14.2.0-8ubuntu1) ... 83s Selecting previously unselected package liblapack3:amd64. 83s Preparing to unpack .../02-liblapack3_3.12.0-3build2_amd64.deb ... 83s Unpacking liblapack3:amd64 (3.12.0-3build2) ... 83s Selecting previously unselected package python3-numpy. 83s Preparing to unpack .../03-python3-numpy_1%3a1.26.4+ds-11build1_amd64.deb ... 83s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 83s Selecting previously unselected package libaec0:amd64. 83s Preparing to unpack .../04-libaec0_1.1.3-1_amd64.deb ... 83s Unpacking libaec0:amd64 (1.1.3-1) ... 83s Selecting previously unselected package libsz2:amd64. 83s Preparing to unpack .../05-libsz2_1.1.3-1_amd64.deb ... 83s Unpacking libsz2:amd64 (1.1.3-1) ... 83s Selecting previously unselected package libhdf5-103-1t64:amd64. 83s Preparing to unpack .../06-libhdf5-103-1t64_1.10.10+repack-4ubuntu3_amd64.deb ... 83s Unpacking libhdf5-103-1t64:amd64 (1.10.10+repack-4ubuntu3) ... 83s Selecting previously unselected package libhdf5-hl-100t64:amd64. 83s Preparing to unpack .../07-libhdf5-hl-100t64_1.10.10+repack-4ubuntu3_amd64.deb ... 83s Unpacking libhdf5-hl-100t64:amd64 (1.10.10+repack-4ubuntu3) ... 83s Selecting previously unselected package liblzf1:amd64. 83s Preparing to unpack .../08-liblzf1_3.6-4_amd64.deb ... 83s Unpacking liblzf1:amd64 (3.6-4) ... 83s Selecting previously unselected package python3-h5py-serial. 83s Preparing to unpack .../09-python3-h5py-serial_3.11.0-5ubuntu1_amd64.deb ... 83s Unpacking python3-h5py-serial (3.11.0-5ubuntu1) ... 84s Selecting previously unselected package python3-h5py. 84s Preparing to unpack .../10-python3-h5py_3.11.0-5ubuntu1_all.deb ... 84s Unpacking python3-h5py (3.11.0-5ubuntu1) ... 84s Selecting previously unselected package libgomp1:amd64. 84s Preparing to unpack .../11-libgomp1_14.2.0-8ubuntu1_amd64.deb ... 84s Unpacking libgomp1:amd64 (14.2.0-8ubuntu1) ... 84s Selecting previously unselected package libevent-pthreads-2.1-7t64:amd64. 84s Preparing to unpack .../12-libevent-pthreads-2.1-7t64_2.1.12-stable-10_amd64.deb ... 84s Unpacking libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10) ... 84s Selecting previously unselected package libpsm-infinipath1. 84s Preparing to unpack .../13-libpsm-infinipath1_3.3+20.604758e7-6.3build1_amd64.deb ... 84s Unpacking libpsm-infinipath1 (3.3+20.604758e7-6.3build1) ... 84s Selecting previously unselected package libpsm2-2. 84s Preparing to unpack .../14-libpsm2-2_11.2.185-2.1_amd64.deb ... 84s Unpacking libpsm2-2 (11.2.185-2.1) ... 84s Selecting previously unselected package librdmacm1t64:amd64. 84s Preparing to unpack .../15-librdmacm1t64_52.0-2ubuntu1_amd64.deb ... 84s Unpacking librdmacm1t64:amd64 (52.0-2ubuntu1) ... 84s Selecting previously unselected package libfabric1:amd64. 84s Preparing to unpack .../16-libfabric1_1.17.0-3ubuntu1_amd64.deb ... 84s Unpacking libfabric1:amd64 (1.17.0-3ubuntu1) ... 84s Selecting previously unselected package libhwloc15:amd64. 84s Preparing to unpack .../17-libhwloc15_2.11.2-1_amd64.deb ... 84s Unpacking libhwloc15:amd64 (2.11.2-1) ... 84s Selecting previously unselected package libmunge2:amd64. 84s Preparing to unpack .../18-libmunge2_0.5.15-4build1_amd64.deb ... 84s Unpacking libmunge2:amd64 (0.5.15-4build1) ... 84s Selecting previously unselected package libpciaccess0:amd64. 84s Preparing to unpack .../19-libpciaccess0_0.17-3build1_amd64.deb ... 84s Unpacking libpciaccess0:amd64 (0.17-3build1) ... 84s Selecting previously unselected package libxnvctrl0:amd64. 84s Preparing to unpack .../20-libxnvctrl0_510.47.03-0ubuntu4_amd64.deb ... 84s Unpacking libxnvctrl0:amd64 (510.47.03-0ubuntu4) ... 84s Selecting previously unselected package ocl-icd-libopencl1:amd64. 84s Preparing to unpack .../21-ocl-icd-libopencl1_2.3.2-1build1_amd64.deb ... 84s Unpacking ocl-icd-libopencl1:amd64 (2.3.2-1build1) ... 84s Selecting previously unselected package libhwloc-plugins:amd64. 84s Preparing to unpack .../22-libhwloc-plugins_2.11.2-1_amd64.deb ... 84s Unpacking libhwloc-plugins:amd64 (2.11.2-1) ... 84s Selecting previously unselected package libpmix2t64:amd64. 84s Preparing to unpack .../23-libpmix2t64_5.0.3-2_amd64.deb ... 84s Unpacking libpmix2t64:amd64 (5.0.3-2) ... 84s Selecting previously unselected package libllvm17t64:amd64. 84s Preparing to unpack .../24-libllvm17t64_1%3a17.0.6-18_amd64.deb ... 84s Unpacking libllvm17t64:amd64 (1:17.0.6-18) ... 84s Selecting previously unselected package libamd-comgr2:amd64. 84s Preparing to unpack .../25-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3build2_amd64.deb ... 84s Unpacking libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3build2) ... 85s Selecting previously unselected package libdrm-amdgpu1:amd64. 85s Preparing to unpack .../26-libdrm-amdgpu1_2.4.123-1_amd64.deb ... 85s Unpacking libdrm-amdgpu1:amd64 (2.4.123-1) ... 85s Selecting previously unselected package libhsakmt1:amd64. 85s Preparing to unpack .../27-libhsakmt1_5.7.0-1build1_amd64.deb ... 85s Unpacking libhsakmt1:amd64 (5.7.0-1build1) ... 85s Selecting previously unselected package libhsa-runtime64-1. 85s Preparing to unpack .../28-libhsa-runtime64-1_5.7.1-2build1_amd64.deb ... 85s Unpacking libhsa-runtime64-1 (5.7.1-2build1) ... 85s Selecting previously unselected package libamdhip64-5. 85s Preparing to unpack .../29-libamdhip64-5_5.7.1-5_amd64.deb ... 85s Unpacking libamdhip64-5 (5.7.1-5) ... 85s Selecting previously unselected package libibumad3:amd64. 85s Preparing to unpack .../30-libibumad3_52.0-2ubuntu1_amd64.deb ... 85s Unpacking libibumad3:amd64 (52.0-2ubuntu1) ... 85s Selecting previously unselected package libibmad5:amd64. 85s Preparing to unpack .../31-libibmad5_52.0-2ubuntu1_amd64.deb ... 85s Unpacking libibmad5:amd64 (52.0-2ubuntu1) ... 85s Selecting previously unselected package libucx0:amd64. 85s Preparing to unpack .../32-libucx0_1.17.0+ds-3build1_amd64.deb ... 85s Unpacking libucx0:amd64 (1.17.0+ds-3build1) ... 85s Selecting previously unselected package libopenmpi3t64:amd64. 85s Preparing to unpack .../33-libopenmpi3t64_4.1.6-13.3ubuntu2_amd64.deb ... 85s Unpacking libopenmpi3t64:amd64 (4.1.6-13.3ubuntu2) ... 85s Selecting previously unselected package libhdf5-openmpi-103-1t64:amd64. 85s Preparing to unpack .../34-libhdf5-openmpi-103-1t64_1.10.10+repack-4ubuntu3_amd64.deb ... 85s Unpacking libhdf5-openmpi-103-1t64:amd64 (1.10.10+repack-4ubuntu3) ... 85s Selecting previously unselected package bitshuffle. 85s Preparing to unpack .../35-bitshuffle_0.5.1-2_amd64.deb ... 85s Unpacking bitshuffle (0.5.1-2) ... 85s Selecting previously unselected package autopkgtest-satdep. 85s Preparing to unpack .../36-1-autopkgtest-satdep.deb ... 85s Unpacking autopkgtest-satdep (0) ... 85s Setting up libpciaccess0:amd64 (0.17-3build1) ... 85s Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10) ... 85s Setting up libibumad3:amd64 (52.0-2ubuntu1) ... 85s Setting up libibmad5:amd64 (52.0-2ubuntu1) ... 85s Setting up libgomp1:amd64 (14.2.0-8ubuntu1) ... 85s Setting up libaec0:amd64 (1.1.3-1) ... 85s Setting up libxnvctrl0:amd64 (510.47.03-0ubuntu4) ... 85s Setting up libblas3:amd64 (3.12.0-3build2) ... 85s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 85s Setting up libmunge2:amd64 (0.5.15-4build1) ... 85s Setting up libllvm17t64:amd64 (1:17.0.6-18) ... 85s Setting up liblzf1:amd64 (3.6-4) ... 85s Setting up libhwloc15:amd64 (2.11.2-1) ... 85s Setting up libgfortran5:amd64 (14.2.0-8ubuntu1) ... 85s Setting up ocl-icd-libopencl1:amd64 (2.3.2-1build1) ... 85s Setting up libpsm2-2 (11.2.185-2.1) ... 85s Setting up librdmacm1t64:amd64 (52.0-2ubuntu1) ... 85s Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3build2) ... 85s Setting up libpsm-infinipath1 (3.3+20.604758e7-6.3build1) ... 85s update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode 85s Setting up libsz2:amd64 (1.1.3-1) ... 85s Setting up libdrm-amdgpu1:amd64 (2.4.123-1) ... 85s Setting up libfabric1:amd64 (1.17.0-3ubuntu1) ... 85s Setting up liblapack3:amd64 (3.12.0-3build2) ... 85s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 85s Setting up libhwloc-plugins:amd64 (2.11.2-1) ... 85s Setting up libpmix2t64:amd64 (5.0.3-2) ... 85s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 87s Setting up libhdf5-103-1t64:amd64 (1.10.10+repack-4ubuntu3) ... 87s Setting up libhsakmt1:amd64 (5.7.0-1build1) ... 87s Setting up libhdf5-hl-100t64:amd64 (1.10.10+repack-4ubuntu3) ... 87s Setting up python3-h5py-serial (3.11.0-5ubuntu1) ... 87s Setting up python3-h5py (3.11.0-5ubuntu1) ... 87s Setting up libhsa-runtime64-1 (5.7.1-2build1) ... 87s Setting up libamdhip64-5 (5.7.1-5) ... 87s Setting up libucx0:amd64 (1.17.0+ds-3build1) ... 87s Setting up libopenmpi3t64:amd64 (4.1.6-13.3ubuntu2) ... 87s Setting up libhdf5-openmpi-103-1t64:amd64 (1.10.10+repack-4ubuntu3) ... 87s Setting up bitshuffle (0.5.1-2) ... 88s Setting up autopkgtest-satdep (0) ... 88s Processing triggers for man-db (2.12.1-3) ... 88s Processing triggers for libc-bin (2.40-1ubuntu3) ... 90s (Reading database ... 76992 files and directories currently installed.) 90s Removing autopkgtest-satdep (0) ... 90s autopkgtest [09:17:15]: test command1: python3 -c 'import sys, h5py; sys.exit(not h5py.h5z.filter_avail(32008))' 90s autopkgtest [09:17:15]: test command1: [----------------------- 91s autopkgtest [09:17:16]: test command1: -----------------------] 91s command1 PASS 91s autopkgtest [09:17:16]: test command1: - - - - - - - - - - results - - - - - - - - - - 91s autopkgtest [09:17:16]: test command2: preparing testbed 92s Reading package lists... 93s Building dependency tree... 93s Reading state information... 93s Starting pkgProblemResolver with broken count: 0 93s Starting 2 pkgProblemResolver with broken count: 0 93s Done 93s The following NEW packages will be installed: 93s autopkgtest-satdep 93s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 93s Need to get 0 B/716 B of archives. 93s After this operation, 0 B of additional disk space will be used. 93s Get:1 /tmp/autopkgtest.BUxvby/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [716 B] 94s Selecting previously unselected package autopkgtest-satdep. 94s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76992 files and directories currently installed.) 94s Preparing to unpack .../2-autopkgtest-satdep.deb ... 94s Unpacking autopkgtest-satdep (0) ... 94s Setting up autopkgtest-satdep (0) ... 96s (Reading database ... 76992 files and directories currently installed.) 96s Removing autopkgtest-satdep (0) ... 96s autopkgtest [09:17:21]: test command2: H5PY_ALWAYS_USE_MPI=1 python3 -c 'import sys, h5py; sys.exit(not h5py.h5z.filter_avail(32008))' 96s autopkgtest [09:17:21]: test command2: [----------------------- 96s autopkgtest [09:17:21]: test command2: -----------------------] 97s autopkgtest [09:17:22]: test command2: - - - - - - - - - - results - - - - - - - - - - 97s command2 PASS 97s autopkgtest [09:17:22]: test testsuite: preparing testbed 1900s nova [W] Skipping flock for amd64 1900s Creating nova instance adt-plucky-amd64-bitshuffle-20241113-080641-juju-7f2275-prod-proposed-migration-environment-20-79383001-143a-4bc8-a9b5-ec93f683d70b from image adt/ubuntu-plucky-amd64-server-20241113.img (UUID 76b850f9-98f4-4b79-af06-fa11000b95b2)... 1900s ERROR (CommandError): Unable to delete the specified server(s). 1900s Unexpected error: 1900s Traceback (most recent call last): 1900s File "/home/ubuntu/autopkgtest/lib/VirtSubproc.py", line 830, in mainloop 1900s command() 1900s File "/home/ubuntu/autopkgtest/lib/VirtSubproc.py", line 759, in command 1900s r = f(c, ce) 1900s File "/home/ubuntu/autopkgtest/lib/VirtSubproc.py", line 392, in cmd_revert 1900s caller.hook_revert() 1900s File "/home/ubuntu/autopkgtest/virt/autopkgtest-virt-ssh", line 444, in hook_revert 1900s host_setup('revert') 1900s File "/home/ubuntu/autopkgtest/virt/autopkgtest-virt-ssh", line 263, in host_setup 1900s execute_setup_script(command) 1900s File "/home/ubuntu/autopkgtest/virt/autopkgtest-virt-ssh", line 202, in execute_setup_script 1900s (status, out, err) = VirtSubproc.execute_timeout( 1900s File "/home/ubuntu/autopkgtest/lib/VirtSubproc.py", line 155, in execute_timeout 1900s (out, err) = sp.communicate(instr) 1900s File "/usr/lib/python3.8/subprocess.py", line 1028, in communicate 1900s stdout, stderr = self._communicate(input, endtime, timeout) 1900s File "/usr/lib/python3.8/subprocess.py", line 1868, in _communicate 1900s ready = selector.select(timeout) 1900s File "/usr/lib/python3.8/selectors.py", line 415, in select 1900s fd_event_list = self._selector.poll(timeout) 1900s File "/home/ubuntu/autopkgtest/lib/VirtSubproc.py", line 75, in alarm_handler 1900s raise Timeout(to) 1900s VirtSubproc.Timeout: 1800 1900s autopkgtest [09:47:25]: ERROR: testbed failure: unexpected eof from the testbed