0s autopkgtest [21:50:47]: starting date and time: 2024-12-01 21:50:47+0000 0s autopkgtest [21:50:47]: git checkout: be626eda Fix armhf LXD image generation for plucky 0s autopkgtest [21:50:47]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.lqh43qtw/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:fftw3 --apt-upgrade bart --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=fftw3/3.3.10-2fakesync1build1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-30.secgroup --name adt-plucky-amd64-bart-20241201-215047-juju-7f2275-prod-proposed-migration-environment-15-c755f5f8-b64c-4914-bbe6-1d079db23a4d --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 44s autopkgtest [21:51:31]: testbed dpkg architecture: amd64 44s autopkgtest [21:51:31]: testbed apt version: 2.9.14ubuntu1 45s autopkgtest [21:51:32]: @@@@@@@@@@@@@@@@@@@@ test bed setup 45s autopkgtest [21:51:32]: testbed release detected to be: None 45s autopkgtest [21:51:32]: updating testbed package index (apt update) 46s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 46s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 46s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 46s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 46s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 46s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [873 kB] 46s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 46s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [71.4 kB] 46s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [87.7 kB] 46s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [133 kB] 46s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted i386 Packages [2572 B] 46s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [40.6 kB] 46s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [314 kB] 46s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [802 kB] 46s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [6924 B] 47s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [22.4 kB] 47s Fetched 2452 kB in 1s (2786 kB/s) 47s Reading package lists... 48s Reading package lists... 48s Building dependency tree... 48s Reading state information... 48s Calculating upgrade... 48s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 48s Reading package lists... 48s Building dependency tree... 48s Reading state information... 49s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 49s autopkgtest [21:51:36]: upgrading testbed (apt dist-upgrade and autopurge) 49s Reading package lists... 49s Building dependency tree... 49s Reading state information... 49s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 49s Starting 2 pkgProblemResolver with broken count: 0 49s Done 50s Entering ResolveByKeep 50s 50s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 50s Reading package lists... 50s Building dependency tree... 50s Reading state information... 50s Starting pkgProblemResolver with broken count: 0 51s Starting 2 pkgProblemResolver with broken count: 0 51s Done 51s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 54s autopkgtest [21:51:40]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 13:41:20 UTC 2024 54s autopkgtest [21:51:41]: @@@@@@@@@@@@@@@@@@@@ apt-source bart 56s Get:1 http://ftpmaster.internal/ubuntu plucky/universe bart 0.9.00-3 (dsc) [2148 B] 56s Get:2 http://ftpmaster.internal/ubuntu plucky/universe bart 0.9.00-3 (tar) [1150 kB] 56s Get:3 http://ftpmaster.internal/ubuntu plucky/universe bart 0.9.00-3 (diff) [23.7 kB] 56s gpgv: Signature made Sat Oct 12 21:36:04 2024 UTC 56s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 56s gpgv: issuer "tille@debian.org" 56s gpgv: Can't check signature: No public key 56s dpkg-source: warning: cannot verify inline signature for ./bart_0.9.00-3.dsc: no acceptable signature found 57s autopkgtest [21:51:44]: testing package bart version 0.9.00-3 57s suite SKIP Test lists explicitly supported architectures, but the current architecture amd64 isn't listed. 57s autopkgtest [21:51:44]: build not needed 59s suite SKIP Test lists explicitly supported architectures, but the current architecture amd64 isn't listed. 59s autopkgtest [21:51:46]: test command1: preparing testbed 59s Reading package lists... 59s Building dependency tree... 59s Reading state information... 59s Starting pkgProblemResolver with broken count: 0 59s Starting 2 pkgProblemResolver with broken count: 0 59s Done 60s The following NEW packages will be installed: 60s bart libblas3 libfftw3-single3 libgfortran5 libgomp1 liblapack3 liblapacke 60s libtmglib3 60s 0 upgraded, 8 newly installed, 0 to remove and 0 not upgraded. 60s Need to get 7008 kB of archives. 60s After this operation, 21.0 MB of additional disk space will be used. 60s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-4 [332 kB] 60s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-8ubuntu1 [148 kB] 60s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libfftw3-single3 amd64 3.3.10-2fakesync1build1 [871 kB] 60s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-8ubuntu1 [909 kB] 60s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-4 [3177 kB] 60s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libtmglib3 amd64 3.12.0-4 [164 kB] 60s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapacke amd64 3.12.0-4 [410 kB] 60s Get:8 http://ftpmaster.internal/ubuntu plucky/universe amd64 bart amd64 0.9.00-3 [998 kB] 61s Fetched 7008 kB in 1s (8964 kB/s) 61s Selecting previously unselected package libblas3:amd64. 61s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75952 files and directories currently installed.) 61s Preparing to unpack .../0-libblas3_3.12.0-4_amd64.deb ... 61s Unpacking libblas3:amd64 (3.12.0-4) ... 61s Selecting previously unselected package libgomp1:amd64. 61s Preparing to unpack .../1-libgomp1_14.2.0-8ubuntu1_amd64.deb ... 61s Unpacking libgomp1:amd64 (14.2.0-8ubuntu1) ... 61s Selecting previously unselected package libfftw3-single3:amd64. 61s Preparing to unpack .../2-libfftw3-single3_3.3.10-2fakesync1build1_amd64.deb ... 61s Unpacking libfftw3-single3:amd64 (3.3.10-2fakesync1build1) ... 61s Selecting previously unselected package libgfortran5:amd64. 61s Preparing to unpack .../3-libgfortran5_14.2.0-8ubuntu1_amd64.deb ... 61s Unpacking libgfortran5:amd64 (14.2.0-8ubuntu1) ... 61s Selecting previously unselected package liblapack3:amd64. 61s Preparing to unpack .../4-liblapack3_3.12.0-4_amd64.deb ... 61s Unpacking liblapack3:amd64 (3.12.0-4) ... 61s Selecting previously unselected package libtmglib3:amd64. 61s Preparing to unpack .../5-libtmglib3_3.12.0-4_amd64.deb ... 61s Unpacking libtmglib3:amd64 (3.12.0-4) ... 61s Selecting previously unselected package liblapacke:amd64. 61s Preparing to unpack .../6-liblapacke_3.12.0-4_amd64.deb ... 61s Unpacking liblapacke:amd64 (3.12.0-4) ... 61s Selecting previously unselected package bart. 61s Preparing to unpack .../7-bart_0.9.00-3_amd64.deb ... 61s Unpacking bart (0.9.00-3) ... 61s Setting up libgomp1:amd64 (14.2.0-8ubuntu1) ... 61s Setting up libblas3:amd64 (3.12.0-4) ... 61s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 61s Setting up libgfortran5:amd64 (14.2.0-8ubuntu1) ... 61s Setting up liblapack3:amd64 (3.12.0-4) ... 61s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 61s Setting up libfftw3-single3:amd64 (3.3.10-2fakesync1build1) ... 61s Setting up libtmglib3:amd64 (3.12.0-4) ... 61s Setting up liblapacke:amd64 (3.12.0-4) ... 61s Setting up bart (0.9.00-3) ... 61s Processing triggers for man-db (2.13.0-1) ... 62s Processing triggers for libc-bin (2.40-1ubuntu3) ... 63s autopkgtest [21:51:50]: test command1: /usr/bin/bart version 63s autopkgtest [21:51:50]: test command1: [----------------------- 63s v0.9.00 63s autopkgtest [21:51:50]: test command1: -----------------------] 64s command1 PASS (superficial) 64s autopkgtest [21:51:51]: test command1: - - - - - - - - - - results - - - - - - - - - - 64s autopkgtest [21:51:51]: test octave-integration: preparing testbed 120s autopkgtest [21:52:47]: testbed dpkg architecture: amd64 120s autopkgtest [21:52:47]: testbed apt version: 2.9.14ubuntu1 121s autopkgtest [21:52:48]: @@@@@@@@@@@@@@@@@@@@ test bed setup 121s autopkgtest [21:52:48]: testbed release detected to be: plucky 122s autopkgtest [21:52:49]: updating testbed package index (apt update) 122s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 122s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 122s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 122s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 122s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [873 kB] 122s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 122s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 122s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [71.4 kB] 122s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [87.7 kB] 122s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [133 kB] 122s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted i386 Packages [2572 B] 122s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [40.6 kB] 122s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [802 kB] 123s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [314 kB] 123s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [22.4 kB] 123s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [6924 B] 123s Fetched 2452 kB in 1s (2606 kB/s) 123s Reading package lists... 124s Reading package lists... 124s Building dependency tree... 124s Reading state information... 124s Calculating upgrade... 125s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 125s Reading package lists... 125s Building dependency tree... 125s Reading state information... 125s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 125s autopkgtest [21:52:52]: upgrading testbed (apt dist-upgrade and autopurge) 125s Reading package lists... 126s Building dependency tree... 126s Reading state information... 126s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 126s Starting 2 pkgProblemResolver with broken count: 0 126s Done 126s Entering ResolveByKeep 127s 127s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 127s Reading package lists... 127s Building dependency tree... 127s Reading state information... 127s Starting pkgProblemResolver with broken count: 0 127s Starting 2 pkgProblemResolver with broken count: 0 127s Done 128s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 130s Reading package lists... 131s Building dependency tree... 131s Reading state information... 131s Starting pkgProblemResolver with broken count: 20 131s Starting 2 pkgProblemResolver with broken count: 20 131s Investigating (0) libtrilinos-teuchos-13.2:amd64 < none -> 13.2.0-6 @un puN Ib > 131s Broken libtrilinos-teuchos-13.2:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 131s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-teuchos-13.2:amd64 18 131s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-teuchos-13.2:amd64 18 131s Investigating (0) libtrilinos-epetra-13.2:amd64 < none -> 13.2.0-6 @un puN Ib > 131s Broken libtrilinos-epetra-13.2:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 131s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-epetra-13.2:amd64 11 131s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-epetra-13.2:amd64 11 131s Investigating (0) libhdf5-openmpi-103-1t64:amd64 < none -> 1.10.10+repack-4ubuntu3 @un puN Ib > 131s Broken libhdf5-openmpi-103-1t64:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 131s Considering libopenmpi3t64:amd64 0 as a solution to libhdf5-openmpi-103-1t64:amd64 4 131s Considering libopenmpi3t64:amd64 0 as a solution to libhdf5-openmpi-103-1t64:amd64 4 131s Investigating (0) libptscotch-7.0:amd64 < none -> 7.0.5-1ubuntu1 @un puN Ib > 131s Broken libptscotch-7.0:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 131s Considering libopenmpi3t64:amd64 0 as a solution to libptscotch-7.0:amd64 4 131s Considering libopenmpi3t64:amd64 0 as a solution to libptscotch-7.0:amd64 4 131s Investigating (0) libscalapack-openmpi2.2:amd64 < none -> 2.2.1-3.1ubuntu2 @un puN Ib > 131s Broken libscalapack-openmpi2.2:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 131s Considering libopenmpi3t64:amd64 0 as a solution to libscalapack-openmpi2.2:amd64 3 131s Considering libopenmpi3t64:amd64 0 as a solution to libscalapack-openmpi2.2:amd64 3 131s Investigating (0) libtrilinos-epetraext-13.2:amd64 < none -> 13.2.0-6 @un puN Ib > 131s Broken libtrilinos-epetraext-13.2:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 131s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-epetraext-13.2:amd64 3 131s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-epetraext-13.2:amd64 3 131s Investigating (0) libtrilinos-triutils-13.2:amd64 < none -> 13.2.0-6 @un puN Ib > 131s Broken libtrilinos-triutils-13.2:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 131s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-triutils-13.2:amd64 3 131s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-triutils-13.2:amd64 3 131s Investigating (0) libmumps-5.6t64:amd64 < none -> 5.6.2-2.1build3 @un puN Ib > 131s Broken libmumps-5.6t64:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 131s Considering libopenmpi3t64:amd64 0 as a solution to libmumps-5.6t64:amd64 3 131s Considering libopenmpi3t64:amd64 0 as a solution to libmumps-5.6t64:amd64 3 131s Investigating (0) libsuperlu-dist8:amd64 < none -> 8.2.1+dfsg1-2 @un puN Ib > 131s Broken libsuperlu-dist8:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 131s Considering libopenmpi3t64:amd64 0 as a solution to libsuperlu-dist8:amd64 2 131s Considering libopenmpi3t64:amd64 0 as a solution to libsuperlu-dist8:amd64 2 131s Investigating (0) libcombblas2.0.0t64:amd64 < none -> 2.0.0-3.1build3 @un puN Ib > 131s Broken libcombblas2.0.0t64:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 131s Considering libopenmpi3t64:amd64 0 as a solution to libcombblas2.0.0t64:amd64 1 131s Considering libopenmpi3t64:amd64 0 as a solution to libcombblas2.0.0t64:amd64 1 131s Investigating (0) libtrilinos-aztecoo-13.2:amd64 < none -> 13.2.0-6 @un puN Ib > 131s Broken libtrilinos-aztecoo-13.2:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 131s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-aztecoo-13.2:amd64 1 131s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-aztecoo-13.2:amd64 1 131s Investigating (0) libtrilinos-amesos-13.2:amd64 < none -> 13.2.0-6 @un puN Ib > 131s Broken libtrilinos-amesos-13.2:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 131s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-amesos-13.2:amd64 1 131s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-amesos-13.2:amd64 1 131s Investigating (0) libpetsc-real3.20:amd64 < none -> 3.20.6+dfsg1-3ubuntu3 @un puN Ib > 131s Broken libpetsc-real3.20:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 131s Considering libopenmpi3t64:amd64 0 as a solution to libpetsc-real3.20:amd64 1 131s Considering libopenmpi3t64:amd64 0 as a solution to libpetsc-real3.20:amd64 1 131s Investigating (0) libtrilinos-ml-13.2:amd64 < none -> 13.2.0-6 @un puN Ib > 131s Broken libtrilinos-ml-13.2:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 131s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-ml-13.2:amd64 1 131s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-ml-13.2:amd64 1 131s Investigating (0) libhypre-2.31.0:amd64 < none -> 2.31.0-1exp2 @un puN Ib > 131s Broken libhypre-2.31.0:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 131s Considering libopenmpi3t64:amd64 0 as a solution to libhypre-2.31.0:amd64 1 131s Considering libopenmpi3t64:amd64 0 as a solution to libhypre-2.31.0:amd64 1 131s Investigating (0) libtrilinos-galeri-13.2:amd64 < none -> 13.2.0-6 @un puN Ib > 131s Broken libtrilinos-galeri-13.2:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 131s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-galeri-13.2:amd64 0 131s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-galeri-13.2:amd64 0 131s Investigating (0) libsundials-nvecparallel-petsc6:amd64 < none -> 6.4.1+dfsg1-3ubuntu1 @un puN Ib > 131s Broken libsundials-nvecparallel-petsc6:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 131s Considering libopenmpi3t64:amd64 0 as a solution to libsundials-nvecparallel-petsc6:amd64 0 131s Considering libopenmpi3t64:amd64 0 as a solution to libsundials-nvecparallel-petsc6:amd64 0 131s Investigating (0) libtrilinos-zoltan-13.2:amd64 < none -> 13.2.0-6 @un puN Ib > 131s Broken libtrilinos-zoltan-13.2:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 131s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-zoltan-13.2:amd64 0 131s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-zoltan-13.2:amd64 0 131s Investigating (0) mpi-default-bin:amd64 < none -> 1.17 @un puN Ib > 131s Broken mpi-default-bin:amd64 Depends on openmpi-bin:amd64 < none @un H > 131s Considering openmpi-bin:amd64 1 as a solution to mpi-default-bin:amd64 0 131s Considering openmpi-bin:amd64 1 as a solution to mpi-default-bin:amd64 0 131s Considering openmpi-bin:i386 0 as a solution to mpi-default-bin:amd64 0 131s Investigating (0) libtrilinos-ifpack-13.2:amd64 < none -> 13.2.0-6 @un puN Ib > 131s Broken libtrilinos-ifpack-13.2:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 131s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-ifpack-13.2:amd64 0 131s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-ifpack-13.2:amd64 0 131s Done 131s Some packages could not be installed. This may mean that you have 131s requested an impossible situation or if you are using the unstable 131s distribution that some required packages have not yet been created 131s or been moved out of Incoming. 131s The following information may help to resolve the situation: 131s 131s The following packages have unmet dependencies: 131s libcombblas2.0.0t64 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 131s libhdf5-openmpi-103-1t64 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 131s libhypre-2.31.0 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 131s libmumps-5.6t64 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 131s libpetsc-real3.20 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 131s libptscotch-7.0 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 131s libscalapack-openmpi2.2 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 131s libsundials-nvecparallel-petsc6 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 131s libsuperlu-dist8 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 131s libtrilinos-amesos-13.2 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 131s libtrilinos-aztecoo-13.2 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 131s libtrilinos-epetra-13.2 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 131s libtrilinos-epetraext-13.2 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 131s libtrilinos-galeri-13.2 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 131s libtrilinos-ifpack-13.2 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 131s libtrilinos-ml-13.2 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 131s libtrilinos-teuchos-13.2 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 131s libtrilinos-triutils-13.2 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 131s libtrilinos-zoltan-13.2 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 131s mpi-default-bin : Depends: openmpi-bin 131s E: Unable to correct problems, you have held broken packages. 131s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from plucky-proposed 131s Reading package lists... 132s Building dependency tree... 132s Reading state information... 132s Starting pkgProblemResolver with broken count: 14 132s Starting 2 pkgProblemResolver with broken count: 14 132s Investigating (0) libtrilinos-teuchos-13.2:amd64 < none -> 13.2.0-6 @un puN Ib > 132s Broken libtrilinos-teuchos-13.2:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 132s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-teuchos-13.2:amd64 18 132s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-teuchos-13.2:amd64 18 132s Investigating (0) libtrilinos-epetra-13.2:amd64 < none -> 13.2.0-6 @un puN Ib > 132s Broken libtrilinos-epetra-13.2:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 132s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-epetra-13.2:amd64 11 132s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-epetra-13.2:amd64 11 132s Investigating (0) libmumps-5.6t64:amd64 < none -> 5.6.2-2.1build3 @un puN Ib > 132s Broken libmumps-5.6t64:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 132s Considering libopenmpi3t64:amd64 0 as a solution to libmumps-5.6t64:amd64 3 132s Considering libopenmpi3t64:amd64 0 as a solution to libmumps-5.6t64:amd64 3 132s Investigating (0) libtrilinos-epetraext-13.2:amd64 < none -> 13.2.0-6 @un puN Ib > 132s Broken libtrilinos-epetraext-13.2:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 132s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-epetraext-13.2:amd64 3 132s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-epetraext-13.2:amd64 3 132s Investigating (0) libtrilinos-triutils-13.2:amd64 < none -> 13.2.0-6 @un puN Ib > 132s Broken libtrilinos-triutils-13.2:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 132s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-triutils-13.2:amd64 3 132s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-triutils-13.2:amd64 3 132s Investigating (0) libtrilinos-ml-13.2:amd64 < none -> 13.2.0-6 @un puN Ib > 132s Broken libtrilinos-ml-13.2:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 132s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-ml-13.2:amd64 1 132s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-ml-13.2:amd64 1 132s Investigating (0) libtrilinos-aztecoo-13.2:amd64 < none -> 13.2.0-6 @un puN Ib > 132s Broken libtrilinos-aztecoo-13.2:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 132s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-aztecoo-13.2:amd64 1 132s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-aztecoo-13.2:amd64 1 132s Investigating (0) libtrilinos-amesos-13.2:amd64 < none -> 13.2.0-6 @un puN Ib > 132s Broken libtrilinos-amesos-13.2:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 132s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-amesos-13.2:amd64 1 132s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-amesos-13.2:amd64 1 132s Investigating (0) libpetsc-real3.20:amd64 < none -> 3.20.6+dfsg1-3ubuntu3 @un puN Ib > 132s Broken libpetsc-real3.20:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 132s Considering libopenmpi3t64:amd64 0 as a solution to libpetsc-real3.20:amd64 1 132s Considering libopenmpi3t64:amd64 0 as a solution to libpetsc-real3.20:amd64 1 132s Investigating (0) libhypre-2.31.0:amd64 < none -> 2.31.0-1exp2 @un puN Ib > 132s Broken libhypre-2.31.0:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 132s Considering libopenmpi3t64:amd64 0 as a solution to libhypre-2.31.0:amd64 1 132s Considering libopenmpi3t64:amd64 0 as a solution to libhypre-2.31.0:amd64 1 132s Investigating (0) libtrilinos-galeri-13.2:amd64 < none -> 13.2.0-6 @un puN Ib > 132s Broken libtrilinos-galeri-13.2:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 132s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-galeri-13.2:amd64 0 132s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-galeri-13.2:amd64 0 132s Investigating (0) libsundials-nvecparallel-petsc6:amd64 < none -> 6.4.1+dfsg1-3ubuntu1 @un puN Ib > 132s Broken libsundials-nvecparallel-petsc6:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 132s Considering libopenmpi3t64:amd64 0 as a solution to libsundials-nvecparallel-petsc6:amd64 0 132s Considering libopenmpi3t64:amd64 0 as a solution to libsundials-nvecparallel-petsc6:amd64 0 132s Investigating (0) libtrilinos-zoltan-13.2:amd64 < none -> 13.2.0-6 @un puN Ib > 132s Broken libtrilinos-zoltan-13.2:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 132s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-zoltan-13.2:amd64 0 132s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-zoltan-13.2:amd64 0 132s Investigating (0) libtrilinos-ifpack-13.2:amd64 < none -> 13.2.0-6 @un puN Ib > 132s Broken libtrilinos-ifpack-13.2:amd64 Depends on libopenmpi3t64:amd64 < none @un pH > (>= 4.1.6) 132s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-ifpack-13.2:amd64 0 132s Considering libopenmpi3t64:amd64 0 as a solution to libtrilinos-ifpack-13.2:amd64 0 132s Done 132s Some packages could not be installed. This may mean that you have 132s requested an impossible situation or if you are using the unstable 132s distribution that some required packages have not yet been created 132s or been moved out of Incoming. 132s The following information may help to resolve the situation: 132s 132s The following packages have unmet dependencies: 132s libhypre-2.31.0 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 132s libmumps-5.6t64 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 132s libpetsc-real3.20 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 132s libsundials-nvecparallel-petsc6 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 132s libtrilinos-amesos-13.2 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 132s libtrilinos-aztecoo-13.2 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 132s libtrilinos-epetra-13.2 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 132s libtrilinos-epetraext-13.2 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 132s libtrilinos-galeri-13.2 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 132s libtrilinos-ifpack-13.2 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 132s libtrilinos-ml-13.2 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 132s libtrilinos-teuchos-13.2 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 132s libtrilinos-triutils-13.2 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 132s libtrilinos-zoltan-13.2 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 132s E: Unable to correct problems, you have held broken packages. 132s autopkgtest [21:52:59]: test commands: preparing testbed 132s octave-integration FAIL badpkg 132s blame: bart 132s badpkg: Test dependencies are unsatisfiable. A common reason is that your testbed is out of date with respect to the archive, and you need to use a current testbed or run apt-get update or use -U. 182s autopkgtest [21:53:49]: testbed dpkg architecture: amd64 182s autopkgtest [21:53:49]: testbed apt version: 2.9.14ubuntu1 182s autopkgtest [21:53:49]: @@@@@@@@@@@@@@@@@@@@ test bed setup 182s autopkgtest [21:53:49]: testbed release detected to be: plucky 183s autopkgtest [21:53:50]: updating testbed package index (apt update) 183s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 184s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 184s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 184s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 184s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 184s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [71.4 kB] 184s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 184s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [873 kB] 184s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [87.7 kB] 184s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [133 kB] 184s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted i386 Packages [2572 B] 184s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [40.6 kB] 184s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [314 kB] 184s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [802 kB] 184s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [6924 B] 184s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [22.4 kB] 184s Fetched 2452 kB in 1s (2799 kB/s) 185s Reading package lists... 185s Reading package lists... 186s Building dependency tree... 186s Reading state information... 186s Calculating upgrade... 186s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 186s Reading package lists... 186s Building dependency tree... 186s Reading state information... 186s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 186s autopkgtest [21:53:53]: upgrading testbed (apt dist-upgrade and autopurge) 187s Reading package lists... 187s Building dependency tree... 187s Reading state information... 187s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 187s Starting 2 pkgProblemResolver with broken count: 0 187s Done 187s Entering ResolveByKeep 187s 188s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 188s Reading package lists... 188s Building dependency tree... 188s Reading state information... 188s Starting pkgProblemResolver with broken count: 0 188s Starting 2 pkgProblemResolver with broken count: 0 188s Done 188s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 191s Reading package lists... 191s Building dependency tree... 191s Reading state information... 191s Starting pkgProblemResolver with broken count: 0 191s Starting 2 pkgProblemResolver with broken count: 0 191s Done 192s The following NEW packages will be installed: 192s bart libblas3 libfftw3-single3 libgfortran5 libgomp1 liblapack3 liblapacke 192s libtmglib3 192s 0 upgraded, 8 newly installed, 0 to remove and 0 not upgraded. 192s Need to get 7008 kB of archives. 192s After this operation, 21.0 MB of additional disk space will be used. 192s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-4 [332 kB] 192s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-8ubuntu1 [148 kB] 192s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libfftw3-single3 amd64 3.3.10-2fakesync1build1 [871 kB] 192s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-8ubuntu1 [909 kB] 192s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-4 [3177 kB] 192s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libtmglib3 amd64 3.12.0-4 [164 kB] 192s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapacke amd64 3.12.0-4 [410 kB] 192s Get:8 http://ftpmaster.internal/ubuntu plucky/universe amd64 bart amd64 0.9.00-3 [998 kB] 193s Fetched 7008 kB in 1s (8699 kB/s) 193s Selecting previously unselected package libblas3:amd64. 193s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75952 files and directories currently installed.) 193s Preparing to unpack .../0-libblas3_3.12.0-4_amd64.deb ... 193s Unpacking libblas3:amd64 (3.12.0-4) ... 193s Selecting previously unselected package libgomp1:amd64. 193s Preparing to unpack .../1-libgomp1_14.2.0-8ubuntu1_amd64.deb ... 193s Unpacking libgomp1:amd64 (14.2.0-8ubuntu1) ... 193s Selecting previously unselected package libfftw3-single3:amd64. 193s Preparing to unpack .../2-libfftw3-single3_3.3.10-2fakesync1build1_amd64.deb ... 193s Unpacking libfftw3-single3:amd64 (3.3.10-2fakesync1build1) ... 193s Selecting previously unselected package libgfortran5:amd64. 193s Preparing to unpack .../3-libgfortran5_14.2.0-8ubuntu1_amd64.deb ... 193s Unpacking libgfortran5:amd64 (14.2.0-8ubuntu1) ... 193s Selecting previously unselected package liblapack3:amd64. 193s Preparing to unpack .../4-liblapack3_3.12.0-4_amd64.deb ... 193s Unpacking liblapack3:amd64 (3.12.0-4) ... 193s Selecting previously unselected package libtmglib3:amd64. 193s Preparing to unpack .../5-libtmglib3_3.12.0-4_amd64.deb ... 193s Unpacking libtmglib3:amd64 (3.12.0-4) ... 193s Selecting previously unselected package liblapacke:amd64. 193s Preparing to unpack .../6-liblapacke_3.12.0-4_amd64.deb ... 193s Unpacking liblapacke:amd64 (3.12.0-4) ... 193s Selecting previously unselected package bart. 193s Preparing to unpack .../7-bart_0.9.00-3_amd64.deb ... 193s Unpacking bart (0.9.00-3) ... 193s Setting up libgomp1:amd64 (14.2.0-8ubuntu1) ... 193s Setting up libblas3:amd64 (3.12.0-4) ... 193s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 193s Setting up libgfortran5:amd64 (14.2.0-8ubuntu1) ... 193s Setting up liblapack3:amd64 (3.12.0-4) ... 193s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 193s Setting up libfftw3-single3:amd64 (3.3.10-2fakesync1build1) ... 193s Setting up libtmglib3:amd64 (3.12.0-4) ... 193s Setting up liblapacke:amd64 (3.12.0-4) ... 193s Setting up bart (0.9.00-3) ... 193s Processing triggers for man-db (2.13.0-1) ... 194s Processing triggers for libc-bin (2.40-1ubuntu3) ... 196s autopkgtest [21:54:03]: test commands: [----------------------- 197s autopkgtest [21:54:04]: test commands: -----------------------] 197s commands PASS (superficial) 197s autopkgtest [21:54:04]: test commands: - - - - - - - - - - results - - - - - - - - - - 198s autopkgtest [21:54:05]: test suite: preparing testbed 198s Reading package lists... 198s Building dependency tree... 198s Reading state information... 199s Starting pkgProblemResolver with broken count: 0 199s Starting 2 pkgProblemResolver with broken count: 0 199s Done 199s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 200s autopkgtest [21:54:07]: test suite: [----------------------- 200s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 1 1 o.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- -1 o.ra om.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 2 2 1 p4.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 o.ra o.ra p0.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 o.ra om.ra p1.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 om.ra om.ra p2.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 om.ra o.ra p3.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 p0.ra p1.ra p0.ra p2.ra p1.ra p3.ra p4.ra p4.ra p3.ra p2.ra p0.ra p4.ra p3.ra p.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 1 1 o.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0 o.ra o0.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 1 o.ra o1.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 2 o.ra o2.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 3 o.ra o3.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 4 o.ra o4.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 o0.ra o2.ra o0.ra o3.ra o2.ra o4.ra o1.ra o1.ra o4.ra o3.ra o0.ra o1.ra o4.ra lab.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//transpose 0 1 lab.ra lab1.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bin -l2 lab1.ra p.ra x.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 2 p0.ra p0.ra p0.ra pa.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize 2 3 pa.ra paa.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 2 p1.ra p1.ra pb.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize 2 3 pb.ra pbb.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 2 p2.ra p2.ra pc.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize 2 3 pc.ra pcc.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 2 p3.ra p3.ra p3.ra pd.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize 2 3 pd.ra pdd.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 2 p4.ra p4.ra pe.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize 2 3 pe.ra pee.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 paa.ra pee.ra pbb.ra pcc.ra pdd.ra comp.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. comp.ra x.ra ;\ 200s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 200s Label binning... 200s 0.000000 200s touch tests/test-bin-label 200s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 1 1 o1.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 2 o1.ra o2.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 3 o1.ra o3.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 4 o1.ra o4.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 5 o1.ra o5.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 6 o1.ra o6.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0 o1.ra o0.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 o0.ra o1.ra o2.ra o3.ra o4.ra o5.ra o6.ra o0.ra o1.ra o2.ra o3.ra o4.ra o5.ra o6.ra incr.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 o6.ra o5.ra o4.ra o3.ra o2.ra o0.ra o1.ra rand.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 o5.ra o6.ra o4.ra o3.ra o2.ra o1.ra o0.ra o5.ra o6.ra o4.ra o3.ra o2.ra o1.ra o0.ra lab.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bin -o lab.ra rand.ra rand_reorder.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. incr.ra rand_reorder.ra ;\ 200s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 200s Reorder binning... 200s 0.000000 200s touch tests/test-bin-reorder 200s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 1 1 o1.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0 o1.ra o0.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- -1 o1.ra om1.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 2 o1.ra o2.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 3 o1.ra o3.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 4 o1.ra o4.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 5 o1.ra o5.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 o1.ra o1.ra q1.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 om1.ra o1.ra q2.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 om1.ra om1.ra q3.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 o1.ra om1.ra q4.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 q2.ra q3.ra q4.ra q1.ra q2.ra qc.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 q1.ra q1.ra q3.ra q3.ra q1.ra qr.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 qr.ra qc.ra q.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//reshape 3075 1 1 5 4 q.ra eof.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 o1.ra o2.ra o3.ra o4.ra o5.ra k.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//transpose 0 10 k.ra k1.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bin -C4 -R2 eof.ra k1.ra qbin.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 o0.ra o0.ra r1c1.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 o1.ra o5.ra r1c2.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 o2.ra o0.ra r1c3.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 o0.ra o0.ra r1c4.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 10 r1c1.ra r1c2.ra r1c3.ra r1c4.ra r1.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 o4.ra o0.ra r2c1.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 o0.ra o0.ra r2c2.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 o0.ra o0.ra r2c3.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 o3.ra o0.ra r2c4.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 10 r2c1.ra r2c2.ra r2c3.ra r2c4.ra r2.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 11 r1.ra r2.ra ref.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//transpose 0 2 ref.ra ref1.ra ;\ 200s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. ref1.ra qbin.ra ;\ 200s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 200s Quadrature binning... 201s 0.000000 201s touch tests/test-bin-quadrature 201s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 1 1 o1.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0 o1.ra o0.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- -1 o1.ra om1.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 2 o1.ra o2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 3 o1.ra o3.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 4 o1.ra o4.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 5 o1.ra o5.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 o1.ra o1.ra q1.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 om1.ra o1.ra q2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 om1.ra om1.ra q3.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 o1.ra om1.ra q4.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 q2.ra q3.ra q4.ra q1.ra q2.ra qc.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 q1.ra q1.ra q3.ra q3.ra q1.ra qr.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 qr.ra qc.ra q.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//reshape 3075 1 1 5 4 q.ra eof.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 o1.ra o2.ra o3.ra o4.ra o5.ra k.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//transpose 0 10 k.ra k1.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bin -C4 -R2 -O 180:-90 eof.ra k1.ra qbin.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 o0.ra o0.ra r1c1.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 o0.ra o0.ra r1c2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 o3.ra o0.ra r1c3.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 o4.ra o0.ra r1c4.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 10 r1c1.ra r1c2.ra r1c3.ra r1c4.ra r1.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 o1.ra o5.ra r2c1.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 o2.ra o0.ra r2c2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 o0.ra o0.ra r2c3.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 o0.ra o0.ra r2c4.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 10 r2c1.ra r2c2.ra r2c3.ra r2c4.ra r2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 11 r1.ra r2.ra ref.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//transpose 0 2 ref.ra ref1.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. ref1.ra qbin.ra ;\ 201s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 201s Quadrature binning... 201s 0.000000 201s touch tests/test-bin-quadrature-offset 201s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 1 1 o1.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0 o1.ra o0.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- -1 o1.ra om1.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 2 o1.ra o2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 3 o1.ra o3.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 4 o1.ra o4.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 5 o1.ra o5.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 o1.ra o1.ra q1.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 om1.ra o1.ra q2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 om1.ra om1.ra q3.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 o1.ra om1.ra q4.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 om1.ra om1.ra qrm1.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 o0.ra o0.ra qr0.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 o1.ra o1.ra qr1.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 q2.ra q3.ra q4.ra q1.ra q2.ra qc.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 qr1.ra qrm1.ra qr0.ra qr1.ra qrm1.ra qr.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 o1.ra o2.ra o3.ra o4.ra o5.ra k.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 qr.ra qc.ra q.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//reshape 3075 1 1 5 4 q.ra eof.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//transpose 0 10 k.ra k1.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bin -C4 -R3 -M eof.ra k1.ra qbin.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 10 o0.ra o5.ra o2.ra o0.ra kb0.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 10 o0.ra o0.ra o0.ra o3.ra kb1.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 10 o4.ra o1.ra o0.ra o0.ra kb2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 11 kb0.ra kb1.ra kb2.ra kj.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. kj.ra qbin.ra ;\ 201s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 201s Quadrature binning... 201s 0.000000 201s touch tests/test-bin-amplitude 201s set -e ;\ 201s [ 0 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bitmask` ] &&\ 201s [ 1 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bitmask 0` ] &&\ 201s [ 1587 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bitmask 0 1 4 5 9 10` ] &&\ 201s [ 65535 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bitmask 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15` ] &&\ 201s true 201s touch tests/test-bitmask 201s set -e ;\ 201s [ -z `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bitmask -b 0 | tr -d '\n'` ] &&\ 201s [ "0 " = "`/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bitmask -b 1 | tr -d '\n'`" ] &&\ 201s [ "0 1 4 5 9 10 " == "`/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bitmask -b 1587 | tr -d '\n'`" ] &&\ 201s [ "0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 " == "`/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bitmask -b 65535 | tr -d '\n'`" ] &&\ 201s true 201s touch tests/test-bitmask-reverse 201s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 10 10 o.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- -45.+28i o.ra o2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//calc zsqrt o2.ra o3.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 2.+7i o.ra r.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 o3.ra r.ra ;\ 201s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 201s 0.000000 201s touch tests/test-calc-zsqrt 201s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 10 10 o.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- -45.+28i o.ra o2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//calc zconj o2.ra o3.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- -45.-28i o.ra r.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 o3.ra r.ra ;\ 201s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 201s 0.000000 201s touch tests/test-calc-zconj 201s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 10 10 o.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- -45.+28i o.ra o2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//calc zreal o2.ra o3.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- -45. o.ra r.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 o3.ra r.ra ;\ 201s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 201s 0.000000 201s touch tests/test-calc-zreal 201s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 10 10 o.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- -45.+28i o.ra o2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//calc zimag o2.ra o3.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- +28i o.ra r.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 o3.ra r.ra ;\ 201s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 201s 0.000000 201s touch tests/test-calc-zimag 201s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 10 10 o.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 1.+1i o.ra o2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//calc zarg o2.ra o3.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 0.785398 o.ra r.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 o3.ra r.ra ;\ 201s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 201s 0.000000 201s touch tests/test-calc-zarg 201s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 10 10 o.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 1.+1i o.ra o2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//calc zabs o2.ra o3.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 1.414213 o.ra r.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 o3.ra r.ra ;\ 201s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 201s 0.000000 201s touch tests/test-calc-zabs 201s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 10 10 o.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 1.+1i o.ra o2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//calc zphsr o2.ra o3.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 0.707107+0.707107i o.ra r.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 o3.ra r.ra ;\ 201s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 201s 0.000000 201s touch tests/test-calc-zphsr 201s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 10 10 o.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 1.+1i o.ra o2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//calc zlog o2.ra o3.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 0.346573+0.785398i o.ra r.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 o3.ra r.ra ;\ 201s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 201s 0.000001 201s touch tests/test-calc-zlog 201s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 10 10 o.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 1.+1i o.ra o2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//calc zexp o2.ra o3.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//calc zlog o3.ra o4.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 o4.ra o2.ra ;\ 201s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 201s 0.000000 201s touch tests/test-calc-zexp 201s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 10 10 o.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 1.+1i o.ra o2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//calc zsin o2.ra o3.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 1.298457+0.634963i o.ra r.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 o3.ra r.ra ;\ 201s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 201s 0.000001 201s touch tests/test-calc-zsin 201s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 10 10 o.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 1.+1i o.ra o2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//calc zcos o2.ra o3.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 0.833730-0.988897i o.ra r.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 o3.ra r.ra ;\ 201s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 201s 0.000001 201s touch tests/test-calc-zcos 201s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 10 10 o.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 1.+1i o.ra o2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//calc zsinh o2.ra o3.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 0.634963+1.298457i o.ra r.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 o3.ra r.ra ;\ 201s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 201s 0.000001 201s touch tests/test-calc-zsinh 201s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 10 10 o.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 1.+1i o.ra o2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//calc zcosh o2.ra o3.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 0.833730+0.988897i o.ra r.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 o3.ra r.ra ;\ 201s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 201s 0.000001 201s touch tests/test-calc-zcosh 201s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 10 10 o.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 0.5 o.ra o2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//calc zcos o2.ra o3.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//spow -- -1 o3.ra o4.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//calc zsin o2.ra o5.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac o4.ra o5.ra o6.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//calc zatanr o6.ra o7.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 o2.ra o7.ra ;\ 201s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 201s 0.000000 201s touch tests/test-calc-zatanr 201s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 10 10 o.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 0.5 o.ra o2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//calc zcos o2.ra o3.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//calc zacosr o3.ra o4.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 o2.ra o4.ra ;\ 201s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 201s 0.000000 201s touch tests/test-calc-zacosr 201s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 6 6 o1.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise o1.ra o2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//casorati 1 2 o2.ra o3.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//reshape 7 5 6 2 o3.ra o4.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//avg 4 o4.ra o5.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 0 1 o5.ra o6.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//squeeze o6.ra o7.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 1 1 3 o2.ra i2.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//avg 2 i2.ra i3.ra ;\ 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. i3.ra o7.ra ;\ 201s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 201s 0.000000 201s touch tests/test-casorati 201s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s8 -k /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra 203s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cc -S -p 8 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-cc8.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cc -S -p 4 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-cc4.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize 3 8 ksp-cc4.ra ksp-cc-z.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.1 ksp-cc8.ra ksp-cc-z.ra ;\ 203s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 203s Done. 203s Done. 203s 0.077849 203s touch tests/test-cc-svd 203s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cc -G -p 4 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-cc4.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rss 11 ksp-cc4.ra ksp0-cc4.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rss 11 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp0.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0001 ksp0.ra ksp0-cc4.ra ;\ 203s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 203s Done. 203s 0.000002 203s touch tests/test-cc-geom 203s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cc -E -p 4 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-cc4.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize 3 8 ksp-cc4.ra ksp-cc-z.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rss 11 ksp-cc4.ra ksp0-cc4.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rss 11 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp0.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0001 ksp0.ra ksp0-cc4.ra ;\ 203s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 203s WARN: Warning: ECC depends on a parameter choice rule for optimal results which is not implemented. 203s Done. 203s 0.000043 203s touch tests/test-cc-esp 203s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cc -S -p 4 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-cc.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cc -M -S /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 4 0 4 sccmat.ra sccmat-4.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -C -s 8 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat-4.ra ksp-cc-3.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//transpose 3 4 ksp-cc-3.ra ksp-cc-4.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. ksp-cc.ra ksp-cc-4.ra ;\ 203s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 203s Done. 203s Done. 203s 0.000000 203s touch tests/test-cc-svd-matrix 203s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cc -S -p 4 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-cc.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cc -M -S /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ccapply -S -p 4 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ksp-cc-2.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. ksp-cc.ra ksp-cc-2.ra ;\ 203s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 203s Done. 203s Done. 203s Done. 203s 0.000000 203s touch tests/test-ccapply-forward 203s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cc -M -S /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ccapply -S -p 4 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ksp-cc.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ccapply -S -u ksp-cc.ra sccmat.ra ksp-2.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 4 0 4 sccmat.ra sccmat-4.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//transpose 3 4 ksp-cc.ra ksp-ccT.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -s 16 ksp-ccT.ra sccmat-4.ra ksp-3.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.08 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-2.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. ksp-2.ra ksp-3.ra ;\ 203s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 203s Done. 203s Done. 203s Done. 203s 0.077849 203s 0.000000 203s touch tests/test-ccapply-backward 203s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cc -G -p 4 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-cc.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cc -M -p 4 -G /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ccapply -G -p 4 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ksp-cc-2.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 4 0 4 sccmat.ra sccmat-4.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. ksp-cc.ra ksp-cc-2.ra ;\ 203s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 203s Done. 203s Done. 203s Done. 203s 0.000000 203s touch tests/test-ccapply-geom-forward 203s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cc -M -p4 -G /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ccapply -G -p 4 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ksp-cc.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ccapply -G -u ksp-cc.ra sccmat.ra ksp-2.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.008 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-2.ra ;\ 203s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 203s Done. 203s Done. 203s Done. 203s 0.006931 203s touch tests/test-ccapply-geom-backward 203s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cc -E -p 4 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-cc.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cc -M -p 4 -E /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ccapply -E -p 4 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ksp-cc-2.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 4 0 4 sccmat.ra sccmat-4.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. ksp-cc.ra ksp-cc-2.ra ;\ 203s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 203s WARN: Warning: ECC depends on a parameter choice rule for optimal results which is not implemented. 203s Done. 203s WARN: Warning: ECC depends on a parameter choice rule for optimal results which is not implemented. 203s Done. 203s Done. 203s 0.000000 203s touch tests/test-ccapply-esp-forward 203s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cc -M -p4 -E /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ccapply -E -p 4 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sccmat.ra ksp-cc.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ccapply -E -u ksp-cc.ra sccmat.ra ksp-2.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.08 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-2.ra ;\ 203s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 203s WARN: Warning: ECC depends on a parameter choice rule for optimal results which is not implemented. 203s Done. 203s Done. 203s Done. 203s 0.011302 203s touch tests/test-ccapply-esp-backward 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra 203s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cdf97 3 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra w.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cdf97 -i 3 w.ra a.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra a.ra ;\ 203s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 203s 0.000001 203s touch tests/test-cdf97 203s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 50 50 a.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//copy a.ra b.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. a.ra b.ra ;\ 203s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 203s 0.000000 203s touch tests/test-copy 203s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 50 50 o.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 100 1 100 o.ra o0.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 2 50 50 o1.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//copy 0 25 1 25 o0.ra o1.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. o1.ra o.ra ;\ 203s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 203s 0.000000 203s touch tests/test-copy-out 203s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 50 50 o.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 100 1 100 o.ra o0.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 2 100 100 o1.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//copy 0 25 1 25 o.ra o1.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. o1.ra o0.ra ;\ 203s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 203s 0.000000 203s touch tests/test-copy-in 203s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ecalib -m1 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra coils.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pocsense -i1 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra coils.ra proj.ra ;\ 203s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.05 proj.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ;\ 203s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 204s Done. 204s Reconstruction... 204s [Iter 0001] Objective: 0.000000, Error: -1.000000 204s Done 204s Done. 204s 0.036856 204s touch tests/test-ecalib 204s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 204s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -n 100 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra shepplogan_noise.ra ;\ 204s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ecalib -m 1 -a -v 100 shepplogan_noise.ra coils.ra ;\ 204s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pocsense -i 1 shepplogan_noise.ra coils.ra proj.ra ;\ 204s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.035 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra proj.ra;\ 204s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 204s --------------------------------------------- 204s | CTR1 | CTR2 | Crop | Est. MSE | 204s --------------------------------------------- 204s | 1 | 1 | 0.9900 | 2.992903680000e+08 | 204s | | 2 | 0.8900 | 7.347899500000e+06 | 204s | | 3 | 0.7900 | 7.119981500000e+06 | 204s | | 4 | 0.6900 | 6.962025000000e+06 | 204s | | 5 | 0.5900 | 7.031899000000e+06 | 204s | 2 | 1 | 0.6400 | 7.006852500000e+06 | 204s | | 2 | 0.6900 | 6.962025000000e+06 | 204s | | 3 | 0.7400 | 7.005169000000e+06 | 204s | 3 | 1 | 0.7150 | 6.967062000000e+06 | 204s | | 2 | 0.6900 | 6.962025000000e+06 | 204s | | 3 | 0.6650 | 6.984865500000e+06 | 204s | 4 | 1 | 0.6775 | 6.971262000000e+06 | 204s | | 2 | 0.6900 | 6.962025000000e+06 | 204s | | 3 | 0.7025 | 6.962145500000e+06 | 204s | 5 | 1 | 0.6962 | 6.959735500000e+06 | 204s | | 2 | 0.6900 | 6.962025000000e+06 | 204s | 6 | 1 | 0.6931 | 6.966177500000e+06 | 204s | | 2 | 0.6962 | 6.959735500000e+06 | 204s | | 3 | 0.6994 | 6.964369000000e+06 | 204s | 7 | 1 | 0.6978 | 6.962482000000e+06 | 204s | | 2 | 0.6963 | 6.959735500000e+06 | 204s | | 3 | 0.6947 | 6.963042000000e+06 | 204s | 8 | 1 | 0.6955 | 6.963181000000e+06 | 204s | | 2 | 0.6963 | 6.959735500000e+06 | 204s | | 3 | 0.6970 | 6.961511500000e+06 | 204s | 9 | 1 | 0.6966 | 6.960474500000e+06 | 204s | | 2 | 0.6962 | 6.959735500000e+06 | 204s | | 3 | 0.6959 | 6.960444500000e+06 | 204s | 10 | 1 | 0.6961 | 6.959735500000e+06 | 204s | | 2 | 0.6962 | 6.959735500000e+06 | 204s --------------------------------------------- 204s Done. 204s Reconstruction... 204s [Iter 0001] Objective: 0.000000, Error: -1.000000 204s Done 204s Done. 204s 0.033706 204s touch tests/test-ecalib-auto 204s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 204s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cc -S -p 4 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp-cc.ra ;\ 204s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ecalib -m1 ksp-cc.ra scc-sens.ra ;\ 204s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ecalib -P -m1 ksp-cc.ra scc-sens2.ra ;\ 204s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -s -t 0.000001 scc-sens.ra scc-sens2.ra ;\ 204s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 204s Done. 204s Done. 204s Done. 204s Scaled by: -0.990795+0.135371i 204s 0.000000 204s touch tests/test-ecalib-rotation 204s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 204s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ecalib -m1 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sens.ra ;\ 204s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cc -M -S /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra cc-mat.ra ;\ 204s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -C -s 8 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra cc-mat.ra ksp-cc.ra ;\ 204s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//transpose 3 4 ksp-cc.ra ksp-cc-2.ra ;\ 204s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ecalib -P -m1 ksp-cc-2.ra scc-sens-1.ra ;\ 204s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//transpose 3 4 scc-sens-1.ra scc-sens-2.ra ;\ 204s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -s 16 scc-sens-2.ra cc-mat.ra scc-sens.ra ;\ 204s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.1 sens.ra scc-sens.ra ;\ 204s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 204s Done. 204s Done. 205s Done. 205s 0.064473 205s touch tests/test-ecalib-rotation2 205s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -q1.5:1:-0.5 -r -y8 t.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -r -y8 t0.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -k -t t.ra k.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -q`DEBUG_LEVEL=0 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//estdelay t0.ra k.ra` -r -y8 t2.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 t.ra t2.ra ;\ 205s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 205s 0.000007 205s touch tests/test-estdelay 205s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -q1.5:1.:-0.5 -r -y8 -c t.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -k -t t.ra k.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -r -y8 -c t0.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -q`DEBUG_LEVEL=0 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//estdelay t0.ra k.ra` -r -y8 -c t2.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0001 t.ra t2.ra ;\ 205s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 205s 0.000008 205s touch tests/test-estdelay-dccen 205s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -O -q1.5:1:-0.5 -r -y8 t.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -r -y8 t0.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -k -t t.ra k.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -O -q`DEBUG_LEVEL=0 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//estdelay t0.ra k.ra` -r -y8 t2.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0011 t.ra t2.ra ;\ 205s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 205s 0.001042 205s touch tests/test-estdelay-transverse 205s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -r -q0.3:0.1:0.2 -c -y5 t.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -c -r -y5 n.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s8 -k -t t.ra k.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -r -q`DEBUG_LEVEL=0 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//estdelay -R n.ra k.ra` -y5 -c t2.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0035 t.ra t2.ra ;\ 205s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 205s 0.002300 205s touch tests/test-estdelay-ring 205s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -G -q0.3:-0.1:0.2 -y5 -o2. -c t.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -G -r -y5 -o2. n.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s8 -k -t t.ra k.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -G -q`DEBUG_LEVEL=0 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//estdelay n.ra k.ra` -y5 -o2. t2.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.004 t.ra t2.ra ;\ 205s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 205s 0.001521 205s touch tests/test-estdelay-coils 205s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -q1.5:1:-0.5 -r -y8 -o2. t.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -r -y8 -o2. t0.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -k -t t.ra k.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -q`DEBUG_LEVEL=0 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//estdelay t0.ra k.ra` -r -y8 -o2. t2.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0001 t.ra t2.ra ;\ 205s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 205s 0.000005 205s touch tests/test-estdelay-scale 205s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -q1.5:1:-0.5 -r -y8 -o2. -c t.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -k -t t.ra k.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -r -y8 -o2. -c t0.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -q`DEBUG_LEVEL=0 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//estdelay t0.ra k.ra` -r -y8 -o2. -c t2.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0001 t.ra t2.ra ;\ 205s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 205s 0.000002 205s touch tests/test-estdelay-dccen-scale 205s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -r -q0.3:0.1:0.2 -O -c -y5 -o2. t.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -c -r -y5 -o2. n.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -k -t t.ra k.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -r -q`DEBUG_LEVEL=0 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//estdelay -R n.ra k.ra` -O -y5 -o2. -c t2.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0001 t.ra t2.ra ;\ 205s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 205s 0.000026 205s touch tests/test-estdelay-ring-scale 205s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -r -q0.3:0.1:0.2 -y5 -o2. t.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -r -y5 -o2. n.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -k -t t.ra k.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -r -q`DEBUG_LEVEL=0 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//estdelay -R n.ra k.ra` -y5 -o2. t2.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.002 t.ra t2.ra ;\ 205s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 205s 0.001891 205s touch tests/test-estdelay-ring-uncen 205s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -q1.5:1.:-0.5 -r -y8 -x128 t.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -k -t t.ra k.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -r -y8 -x128 t0.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 1 1 128 k.ra kb.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 1 1 128 t0.ra t0b.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -q`DEBUG_LEVEL=0 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//estdelay t0b.ra kb.ra` -r -y8 -x128 t2.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0001 t.ra t2.ra ;\ 205s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 205s 0.000019 205s touch tests/test-estdelay-asym 205s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -q1.5:1.:-0.5 -r -y8 -c -x128 t.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -k -t t.ra k.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -r -y8 -c -x128 t0.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 1 1 128 k.ra kb.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 1 1 128 t0.ra t0b.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -D -q`DEBUG_LEVEL=0 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//estdelay t0b.ra kb.ra` -r -y8 -c -x128 t2.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0001 t.ra t2.ra ;\ 205s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 205s 0.000015 205s touch tests/test-estdelay-dccen-asym 205s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 1 1 o.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 100 o.ra o0.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//flip 1 o0.ra o1.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//estshift 1 o1.ra o1.ra | grep "0.000000" ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//estshift 1 o0.ra o1.ra | grep "1.000000" ;\ 205s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 205s Shifts: 0.000000 205s Shifts: 1.000000 205s touch tests/test-estshift 205s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 10 10 o.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 100 1 100 o.ra o0.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 1 45 55 o0.ra o1.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 0 45 55 o1.ra o2.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. o2.ra o.ra ;\ 205s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 205s 0.000000 205s touch tests/test-extract 205s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 10 10 10 o.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 100 1 100 2 100 o.ra o0.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 0 45 55 1 45 55 2 45 55 o0.ra o1.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. o1.ra o.ra ;\ 205s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 205s 0.000000 205s touch tests/test-extract-multidim 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -S8 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//coils.ra 205s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 128. /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp_scaled.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fakeksp /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra ksp_scaled.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//coils.ra out.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.22 ksp_scaled.ra out.ra ;\ 205s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 205s Simulate kspace 205s 0.216102 205s touch tests/test-fakeksp-phantom 205s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 128. /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp_scaled.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//upat -z2 u.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//squeeze u.ra u2.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac ksp_scaled.ra u2.ra ksp_under.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fakeksp -r /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra ksp_under.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//coils.ra out.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac out.ra u2.ra out_pat.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0 ksp_under.ra out_pat.ra ;\ 205s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 205s Replace kspace 205s 0.000000 205s touch tests/test-fakeksp-phantom-replace 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft 7 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_fft.ra 205s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 16384 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra shepploganS.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -i 7 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_fft.ra shepplogan2.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 shepploganS.ra shepplogan2.ra ;\ 205s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 205s 0.000000 205s touch tests/test-fft-basic 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u 7 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_fftu.ra 205s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u -i 7 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_fftu.ra shepplogan2u.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra shepplogan2u.ra ;\ 205s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 205s 0.000000 205s touch tests/test-fft-unitary 205s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fftmod -i 7 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_fftu.ra shepplogan_fftu2.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -uni 7 shepplogan_fftu2.ra shepplogan2u.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fftmod -i 7 shepplogan2u.ra shepplogan3u.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra shepplogan3u.ra ;\ 205s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 205s 0.000000 205s touch tests/test-fft-uncentered 205s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 127 1 16 3 5 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_fftu.ra i.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft 15 i.ra k1.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fftshift -b 15 i.ra t1.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -n 15 t1.ra t2.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fftshift 15 t2.ra k2.ra ;\ 205s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 1e-6 k1.ra k2.ra ;\ 205s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 205s 0.000000 205s touch tests/test-fft-shift 206s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart phantom phan.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart fft 2 phan.ra ksp1.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart -p 1 -rphan.ra fft 2 phan.ra ksp2.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart nrmse -t 1e-5 ksp1.ra ksp2.ra ;\ 206s rm *.ra; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 206s 0.000000 206s touch tests/test-fft-multi-loop-omp 206s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//index 2 10 a.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//filter -m2 -l5 a.ra b.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 2 2 8 a.ra c.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. c.ra b.ra ;\ 206s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 206s 0.000000 206s touch tests/test-filter-median 206s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//index 1 10 a.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//repmat 0 13 a.ra a0.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//repmat 2 11 a0.ra a2.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//filter -m1 -l5 a2.ra b.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 1 2 8 a2.ra c.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. c.ra b.ra ;\ 206s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 206s 0.000000 206s touch tests/test-filter-median2 206s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 4 2 1 O.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 3 4 2 1 Z.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 O.ra Z.ra O.ra Z.ra j.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 1 2 1 o.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.75 o.ra o75.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 o.ra o5.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.25 o.ra o25.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0 o.ra o0.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 o.ra o75.ra o5.ra o25.ra o0.ra o25.ra o5.ra o75.ra o.ra o75.ra o5.ra o25.ra o0.ra j_syn.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//filter -a 0 -l4 j.ra j_filt.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. j_syn.ra j_filt.ra ;\ 206s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 206s 0.000000 206s touch tests/test-filter-movingavg 206s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 6 1 2 1 3 1 4 a0.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise a0.ra a1.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//flatten a1.ra a2.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//reshape 63 24 1 1 1 1 1 a1.ra a3.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. a2.ra a3.ra ;\ 206s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 206s 0.000000 206s touch tests/test-flatten 206s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 2 1 3 a0.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise a0.ra a1.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -s 4 a1.ra a2.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 1 1 o.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -s 4 a1.ra o.ra a3.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. a2.ra a3.ra ;\ 206s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 206s 0.000000 206s touch tests/test-fmac-sum 206s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom x.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u 7 x.ra k.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fovshift -s0:0.5:0. k.ra ks.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u -i 7 ks.ra xs.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//circshift 1 64 x.ra xc.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 xc.ra xs.ra ;\ 206s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 206s 0.000005 206s touch tests/test-fovshift 206s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -x256 -r -y201 t1.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 t1.ra t.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -k -t t.ra k.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fovshift -s0:0.1:0. -t t.ra k.ra ks.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -i -t t.ra ks.ra xs.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -k k2.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fovshift -s0:0.1:0. k2.ra k2s.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u -i 7 k2s.ra x2s.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.06 x2s.ra xs.ra ;\ 206s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 206s Est. image size: 128x128x1 206s Done. 206s 0.055106 206s touch tests/test-fovshift-nc 206s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -iu 3 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra c0.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rss 8 c0.ra r0.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 128 96 o.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 2 128 32 z.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 o.ra z.ra oz.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra oz.ra k1.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//homodyne -C 1 .75 k1.ra c1.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rss 8 c1.ra r1.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.02 r0.ra r1.ra ;\ 206s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 206s 0.015158 206s touch tests/test-homodyne 206s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 128 96 o.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 2 128 32 z.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 o.ra z.ra oz.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra oz.ra k1.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//homodyne -C 1 .75 k1.ra c1.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rss 8 c1.ra r1.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -iu 3 k1.ra c1.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fftmod 3 c1.ra c1f.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//homodyne -n -I -C 1 .75 c1f.ra c1h.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rss 8 c1h.ra r2.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 r1.ra r2.ra ;\ 206s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 206s 0.000000 206s touch tests/test-homodyne-fftu 206s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pattern /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra pat.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//itsense 0.001 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//coils.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra pat.ra reco.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 128. reco.ra reco2.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.23 reco2.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra ;\ 206s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 206s 0.220253 206s touch tests/test-itsense 206s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 206s seq 1 300 | xargs -P 100 -I {} /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 6 1 7 o-{}.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 6 300 7 o1.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 `seq -f "o-%.0f.ra" 1 300` o.ra ;\ 206s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. o.ra o1.ra ;\ 206s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 207s 0.000000 207s touch tests/test-join 207s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 6 7 1 o ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 3 6 7 1 z ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 2 o z o j ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join -a 2 z o o ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. j o ;\ 207s rm *.cfl ; rm *.hdr ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 207s WARN: Overwriting file: o 207s 0.000000 207s touch tests/test-join-append 207s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 6 7 1 o ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 3 6 7 1 z ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 2 o z j ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join -a 2 o z x ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. j x ;\ 207s rm *.cfl ; rm *.hdr ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 207s 0.000000 207s touch tests/test-join-append-one 207s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 10 10 o.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//lrmatrix -s -o y.ra o.ra x.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -s -t 0.002 o.ra y.ra ;\ 207s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 207s Number of levels: 2 207s Total Time: 0.012430 207s Scaled by: -0.000087+0.000000i 207s 0.001193 207s touch tests/test-lrmatrix 207s set -e ;\ 207s if [ "0.000000e+00" != $(/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//measure --mse /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra) ] ;\ 207s then \ 207s false ;\ 207s fi 207s touch tests/test-measure-ideal-mse 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s8 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil.ra 207s set -e ;\ 207s if [ "0.000000e+00" != $(/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//measure --mse-mag /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil.ra) ] ;\ 207s then \ 207s false ;\ 207s fi 207s touch tests/test-measure-ideal-mse-mag 207s set -e ;\ 207s if [ "1.000000e+00" != $(/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//measure --ssim /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra) ] ;\ 207s then \ 207s false ;\ 207s fi 207s touch tests/test-measure-ideal-ssim 207s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x16 -c circ.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//signal -G -n8 -1 3:3:1 -2 0.02:0.02:1 signal_p1.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 5 1 8 signal_p1.ra signal.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac circ.ra signal.ra echoes.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//index 5 8 tmp1.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 1.6 tmp1.ra tmp2.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 5 1 8 tmp2.ra TE.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//mobafit -G -m3 TE.ra echoes.ra reco.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 6 1 reco.ra R2S.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x16 -c circ.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac R2S.ra circ.ra masked.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 0.05 circ.ra ref.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 ref.ra masked.ra ;\ 207s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 207s 0.000000 207s touch tests/test-mobafit-r2s 207s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x16 -c circ.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//signal -G --fat -n8 -1 3:3:1 -2 0.02:0.02:1 signal_p1.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 5 1 8 signal_p1.ra signal.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac circ.ra signal.ra echoes.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//index 5 8 tmp1.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 1.6 tmp1.ra tmp2.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 5 1 8 tmp2.ra TE.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//mobafit -G -m1 TE.ra echoes.ra reco.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 6 0 reco.ra W.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 6 1 reco.ra F.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 6 2 reco.ra R2S.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 6 3 reco.ra fB0.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//saxpy 1 W.ra F.ra temp_inphase.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cabs temp_inphase.ra temp_inphase_abs.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 16 16 ones.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//saxpy 0.000001 ones.ra temp_inphase_abs.ra temp_wf.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//spow -- -1. temp_wf.ra temp_deno.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cabs F.ra temp_F_abs.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac temp_F_abs.ra temp_deno.ra fatfrac.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x16 -c circ.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac fatfrac.ra circ.ra fatfrac_masked.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 0.2 circ.ra fatfrac_ref.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 fatfrac_ref.ra fatfrac_masked.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac R2S.ra circ.ra R2S_masked.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 0.05 circ.ra R2S_ref.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 R2S_ref.ra R2S_masked.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac fB0.ra circ.ra fB0_masked.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 0.02 circ.ra fB0_ref.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 fB0_ref.ra fB0_masked.ra ;\ 207s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 207s 0.000001 207s 0.000001 207s 0.000000 207s touch tests/test-mobafit-wfr2s 207s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x32 -T -b tubes.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//signal -250:160:11 -S -e10 -n16 sig.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//reshape 192 11 1 sig.ra sig2.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -s 64 tubes.ra sig2.ra x.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//index 5 16 te.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//mobafit -T te.ra x.ra fit.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 6 0 fit.ra x0.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 6 1 fit.ra x1.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x32 -T r0.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 r0.ra x0.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//index 6 16 t2.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 6 5 16 t2.ra t2b.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//invert t2b.ra r2.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -s 64 tubes.ra r2.ra r1.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 r1.ra x1.ra ;\ 207s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 207s 0.000000 207s 0.000000 207s touch tests/test-mobafit-r2 207s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x32 -T -b tubes.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//signal -F -I -1 2:2:1 -3.8:.8:11 -r0.41 -n30 sig.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//reshape 192 11 1 sig.ra sig2.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -s 64 tubes.ra sig2.ra x.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//index 5 30 ti1.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 6 1 1 1 1 1 30 ones.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//saxpy 0.5 ones.ra ti1.ra ti2.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.41 ti2.ra ti.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//mobafit --init=.6:1.:.8 -L ti.ra x.ra fit.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 6 0 fit.ra x0.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 6 1 fit.ra x1.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 6 2 fit.ra x2.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x32 -T r1.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 r1.ra x1.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale .8 r1.ra r0.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 r0.ra x0.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale .5 r1.ra r2.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 r2.ra x2.ra ;\ 207s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 207s 0.000001 207s 0.000000 207s 0.000001 207s touch tests/test-mobafit-irll 207s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//vec +1.929238e-01+0.000000e+00i +1.255160e-01+0.000000e+00i +8.905754e-02+0.000000e+00i +5.494139e-02+0.000000e+00i +2.563298e-02+0.000000e+00i +6.914235e-02+0.000000e+00i +2.460453e-01+0.000000e+00i +2.540495e-01+0.000000e+00i +2.561918e-01+0.000000e+00i +2.552134e-01+0.000000e+00i d0.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//vec +2.552905e-01+0.000000e+00i +4.081513e+00+0.000000e+00i +7.058685e-01+0.000000e+00i r0.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//vec +1.844473e-01+0.000000e+00i +9.110585e-02+0.000000e+00i +4.486995e-02+0.000000e+00i +3.315099e-03+0.000000e+00i +3.353683e-02+0.000000e+00i +1.363250e-01+0.000000e+00i +2.706290e-01+0.000000e+00i +2.735427e-01+0.000000e+00i +2.733905e-01+0.000000e+00i +2.728096e-01+0.000000e+00i d1.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//vec +2.723165e-01+0.000000e+00i +5.029132e+00+0.000000e+00i +6.884007e-01+0.000000e+00i r1.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 d0.ra d1.ra td0.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//transpose 0 5 td0.ra td1.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//transpose 1 0 td1.ra testdata.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 r0.ra r1.ra tr0.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//transpose 0 6 tr0.ra tr1.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//transpose 1 0 tr1.ra testresults.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//vec 35 75 100 125 150 250 1000 1500 2000 3000 test_echotimes_ms_o.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//transpose 0 5 test_echotimes_ms_o.ra test_echotimes_ms.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 0.001 test_echotimes_ms.ra test_echotimes_s.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//mobafit -I -a --init 1:1:1 --min-flag 2 --min=0:0.1 test_echotimes_s.ra testdata.ra testfit_R1.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 testresults.ra testfit_R1.ra ;\ 207s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 207s 0.000000 207s touch tests/test-mobafit-ir_t1 207s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 7 3 5 1 1 2 1 5 o.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//multicfl /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra o.ra comb ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//multicfl -s comb sc sck o2 ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil.ra sc ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra sck ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. o.ra o2 ;\ 207s rm *.ra ; rm *.cfl; rm *.hdr ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 207s 0.000000 207s 0.000000 207s 0.000000 207s touch tests/test-multicfl 207s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlinv /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra r.ra c.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//normalize 8 c.ra c_norm.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pocsense -i1 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra c_norm.ra proj.ra ;\ 207s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.05 proj.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ;\ 207s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 207s Scaling: 0.002674 208s Reconstruction... 208s [Iter 0001] Objective: 0.000000, Error: -1.000000 208s Done 208s Done. 208s 0.033635 208s touch tests/test-nlinv 208s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 208s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//repmat 13 4 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp.ra ;\ 208s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft 8192 ksp.ra ksp2.ra ;\ 208s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlinv -S /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra r.ra ;\ 208s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlinv -S ksp2.ra r2.ra ;\ 208s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//repmat 13 4 r.ra r3.ra ;\ 208s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.1 r3.ra r2.ra ;\ 208s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 208s Scaling: 0.002674 209s SMS-NLINV reconstruction. Multiband factor: 4 209s Scaling: 0.001337 211s 0.083688 211s touch tests/test-nlinv-sms 211s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 211s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x256 -y21 traj.ra ;\ 211s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 211s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s8 -k -t traj2.ra ksp.ra ;\ 211s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//repmat 13 4 ksp.ra ksp_rep.ra ;\ 211s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft 8192 ksp_rep.ra ksp2.ra ;\ 211s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlinv -S -i10 -t traj2.ra ksp.ra r.ra ;\ 211s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlinv -S -i10 -t traj2.ra ksp2.ra r2.ra ;\ 211s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//repmat 13 4 r.ra r3.ra ;\ 211s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.1 r3.ra r2.ra ;\ 211s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 211s [ 0 0 0 ] 212s Scaling: 0.000139 217s SMS-NLINV reconstruction. Multiband factor: 4 217s [ 0 0 0 ] 217s Scaling: 0.000069 265s 0.084215 265s touch tests/test-nlinv-sms-noncart 265s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 265s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//conj /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra kc.ra ;\ 265s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 6 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra kc.ra ksp.ra ;\ 265s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlinv -N -S ksp.ra r.ra c.ra ;\ 265s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac r.ra c.ra x.ra ;\ 265s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u 7 x.ra ksp2.ra ;\ 265s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.05 ksp.ra ksp2.ra ;\ 265s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 265s Scaling: 0.001891 266s 0.044559 266s touch tests/test-nlinv-batch 266s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 266s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//repmat 7 2 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ksp.ra ;\ 266s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlinv -s128 -N -S ksp.ra r.ra c.ra ;\ 266s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac r.ra c.ra x.ra ;\ 266s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u 7 x.ra ksp2.ra ;\ 266s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.05 ksp.ra ksp2.ra ;\ 266s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 266s Scaling: 0.001891 267s 0.036258 267s touch tests/test-nlinv-batch2 267s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 267s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x256 -y21 traj.ra ;\ 267s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 267s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s8 -k -t traj2.ra ksp.ra ;\ 267s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlinv -N -S -i9 -t traj2.ra ksp.ra r.ra c.ra ;\ 267s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 128 1 128 c.ra c2.ra ;\ 267s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac r.ra c2.ra x.ra ;\ 267s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft traj2.ra x.ra k2.ra ;\ 267s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.05 ksp.ra k2.ra ;\ 267s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 267s [ 0 0 0 ] 267s Scaling: 0.000139 271s Done. 271s 0.037363 271s touch tests/test-nlinv-noncart 271s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 271s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x256 -y55 traj.ra ;\ 271s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 271s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s8 -k -t traj2.ra ksp.ra ;\ 271s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 1 256 55 o.ra ;\ 271s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -a traj.ra o.ra psf.ra ;\ 271s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -a traj.ra ksp.ra _adj.ra ;\ 271s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 2 _adj.ra adj.ra ;\ 271s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u 7 psf.ra mtf.ra ;\ 271s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u 7 adj.ra ksp2.ra ;\ 271s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 4. mtf.ra mtf2.ra ;\ 271s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlinv -w1. -n -N -i7 -p mtf2.ra ksp2.ra r1.ra c1.ra ;\ 271s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlinv -w1. -N -i7 -t traj2.ra ksp.ra r2.ra c2.ra ;\ 271s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 r2.ra r1.ra ;\ 271s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 c2.ra c1.ra ;\ 271s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 273s Est. image size: 256x256x1 273s Done. 273s Est. image size: 256x256x1 273s Done. 273s Scaling: 1.000000 274s [ 0 0 0 ] 274s Scaling: 1.000000 275s 0.000000 275s 0.000000 275s touch tests/test-nlinv-precomp 275s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 275s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s1 -k ksp.ra ;\ 275s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlinv -m4 -S -i1 ksp.ra r.ra c.ra ;\ 275s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlinv -m4 -U -S -i1 ksp.ra rU.ra cU.ra ;\ 275s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlinv -m4 -N -S -i1 ksp.ra rN.ra cN.ra ;\ 275s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlinv -m4 -N -U -S -i1 ksp.ra rNU.ra cNU.ra ;\ 275s [ 1 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 r.ra` ] &&\ 275s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 c.ra` ] &&\ 275s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 rU.ra` ] &&\ 275s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 cU.ra` ] &&\ 275s [ 1 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 rN.ra` ] &&\ 275s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 cN.ra` ] &&\ 275s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 rNU.ra` ] &&\ 275s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 cNU.ra` ] &&\ 275s true 275s Scaling: 407.373291 275s Scaling: 407.373291 275s Scaling: 407.373291 275s Scaling: 407.373291 275s touch tests/test-nlinv-maps-dims 275s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 275s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -y21 traj.ra ;\ 275s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s1 -k -ttraj.ra ksp.ra ;\ 275s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlinv -m4 -S -i1 -ttraj.ra ksp.ra r.ra c.ra ;\ 275s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlinv -m4 -U -S -i1 -ttraj.ra ksp.ra rU.ra cU.ra ;\ 275s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlinv -m4 -N -S -i1 -ttraj.ra ksp.ra rN.ra cN.ra ;\ 275s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlinv -m4 -N -U -S -i1 -ttraj.ra ksp.ra rNU.ra cNU.ra ;\ 275s [ 1 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 r.ra` ] &&\ 275s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 c.ra` ] &&\ 275s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 rU.ra` ] &&\ 275s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 cU.ra` ] &&\ 275s [ 1 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 rN.ra` ] &&\ 275s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 cN.ra` ] &&\ 275s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 rNU.ra` ] &&\ 275s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 cNU.ra` ] &&\ 275s true 275s [ 0 0 0 ] 275s Scaling: 30.597269 275s [ 0 0 0 ] 275s Scaling: 30.597269 276s [ 0 0 0 ] 276s Scaling: 30.597269 276s [ 0 0 0 ] 276s Scaling: 30.597269 276s touch tests/test-nlinv-noncart-maps-dims 276s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -k /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_ksp.ra 276s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 276s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 2 128 56 z.ra ;\ 276s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 128 72 o.ra ;\ 276s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 o.ra z.ra pat.ra ;\ 276s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac pat.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_ksp.ra pu.ra ;\ 276s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlinv -i10 -c -p pat.ra pu.ra nl.ra ;\ 276s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//flip 7 pat.ra tmp1.ra ;\ 276s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//circshift 1 1 tmp1.ra pat_conj.ra ;\ 276s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 3 pat.ra pat_conj.ra pat_vcc.ra ;\ 276s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//flip 7 pu.ra tmp2.ra ;\ 276s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//circshift 1 1 tmp2.ra tmp3.ra ;\ 276s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//circshift 0 1 tmp3.ra tmp4.ra ;\ 276s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//conj tmp4.ra pu_conj.ra ;\ 276s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 3 pu.ra pu_conj.ra pu_vcc.ra ;\ 276s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlinv -i10 -P -ppat_vcc.ra pu_vcc.ra nl_vcc.ra ;\ 276s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 nl.ra nl_vcc.ra ;\ 276s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 276s Scaling: 440.974426 276s Scaling: 311.816010 276s 0.000002 276s touch tests/test-nlinv-pf-vcc 276s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 276s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x256 -y21 traj.ra ;\ 276s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 276s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s8 -k -t traj2.ra ksp.ra ;\ 276s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlinv -N -S -i8 -t traj2.ra ksp.ra r.ra c.ra ;\ 276s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 128 1 128 c.ra c2.ra ;\ 276s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -r0.01 -S -t traj2.ra ksp.ra c2.ra x2.ra ;\ 276s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.05 x2.ra r.ra ;\ 276s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 277s [ 0 0 0 ] 277s Scaling: 0.000139 280s [ 1 256 21 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 280s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 280s l2 regularization: 0.010000 280s Regularization terms: 1, Supporting variables: 0 280s conjugate gradients 280s Total Time: 0.152070 280s 0.031319 280s touch tests/test-nlinv-pics 280s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 280s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom phantom.ra ;\ 280s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -r -n 0.005 phantom.ra noisy_phantom.ra ;\ 280s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlmeans -H.22 3 noisy_phantom.ra smooth_phantom.ra ;\ 280s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.09 phantom.ra smooth_phantom.ra ;\ 280s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 280s 0.080834 280s touch tests/test-nlmeans 280s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 280s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 2 100 100 z.ra ;\ 280s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s1 -n1. z.ra n.ra ;\ 280s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//std 3 n.ra d.ra ;\ 280s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 1 1 o.ra ;\ 280s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.02 o.ra d.ra ;\ 280s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 280s 0.012457 280s touch tests/test-noise 280s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 280s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 2 100 100 z.ra ;\ 280s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s1 -n1. -r z.ra n.ra ;\ 280s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//std 3 n.ra d.ra ;\ 280s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 1 1 o.ra ;\ 280s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.02 o.ra d.ra ;\ 280s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 280s 0.019487 280s touch tests/test-noise-real 280s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 280s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 2 100 1000 z.ra ;\ 280s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s1 -n1. -S 0.67 z.ra n.ra ;\ 280s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//invert n.ra o.ra ;\ 280s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -s3 o.ra n.ra nz.ra ;\ 280s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//vec 67000 r.ra ;\ 280s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.006 r.ra nz.ra ;\ 280s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 281s 0.001910 281s touch tests/test-noise-spike 281s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 281s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 2.i /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra shepplogan_sc.ra ;\ 281s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -s -t 0.0000001 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra shepplogan_sc.ra ;\ 281s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 281s Scaled by: 0.000000+2.000000i 281s 0.000000 281s touch tests/test-nrmse-scale 281s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 281s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -x128 -y128 traj.ra ;\ 281s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -P traj.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra shepplogan_ksp2.ra ;\ 281s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//reshape 7 128 128 1 shepplogan_ksp2.ra shepplogan_ksp3.ra ;\ 281s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00005 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_fftu.ra shepplogan_ksp3.ra ;\ 281s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 281s Done. 281s 0.000014 281s touch tests/test-nufft-forward 281s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 281s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 3 128 128 1 z.ra ;\ 281s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s123 z.ra n1.ra ;\ 281s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s321 z.ra n2b.ra ;\ 281s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//reshape 7 1 128 128 n2b.ra n2.ra ;\ 281s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x128 -y128 traj.ra ;\ 281s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft traj.ra n1.ra k.ra ;\ 281s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -a traj.ra n2.ra x.ra ;\ 281s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -C -s7 n1.ra x.ra s1.ra ;\ 281s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -C -s7 k.ra n2.ra s2.ra ;\ 281s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 s1.ra s2.ra ;\ 281s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 281s Done. 281s Est. image size: 128x128x1 281s Done. 281s 0.000002 281s touch tests/test-nufft-adjoint 281s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 281s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x256 -y201 traj.ra ;\ 281s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 281s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 281s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -r -i traj2.ra ksp.ra reco.ra ;\ 281s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft traj2.ra reco.ra k2.ra ;\ 281s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.001 ksp.ra k2.ra ;\ 281s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 281s Est. image size: 128x128x1 282s Done. 282s Done. 282s 0.000397 282s touch tests/test-nufft-inverse 282s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 282s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x128 -y128 traj.ra ;\ 282s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -k -t traj.ra ksp.ra ;\ 282s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -P -l1. -i -r traj.ra ksp.ra reco1.ra ;\ 282s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -P -l1. -i -t traj.ra ksp.ra reco2.ra ;\ 282s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0015 reco1.ra reco2.ra ;\ 282s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 282s Est. image size: 128x128x1 283s Done. 283s Est. image size: 128x128x1 283s Done. 283s 0.000021 283s touch tests/test-nufft-toeplitz 283s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 283s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x128 -y12 traj.ra ;\ 283s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -P traj.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra shepplogan_ksp1.ra ;\ 283s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -s traj.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra shepplogan_ksp2.ra ;\ 283s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 128. shepplogan_ksp1.ra shepplogan_ksp3.ra ;\ 283s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00002 shepplogan_ksp2.ra shepplogan_ksp3.ra ;\ 283s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 283s Done. 284s Done. 284s 0.000007 284s touch tests/test-nufft-nudft 284s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 284s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -x128 -y128 traj.ra ;\ 284s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -s traj.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra shepplogan_ksp2.ra ;\ 284s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//reshape 7 128 128 1 shepplogan_ksp2.ra shepplogan_ksp3.ra ;\ 284s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0001 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_fft.ra shepplogan_ksp3.ra ;\ 284s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 300s Done. 300s 0.000027 300s touch tests/test-nudft-forward 300s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 300s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 3 64 64 1 z.ra ;\ 300s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s123 z.ra n1.ra ;\ 300s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s321 z.ra n2b.ra ;\ 300s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//reshape 7 1 64 64 n2b.ra n2.ra ;\ 300s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x64 -y64 traj.ra ;\ 300s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -s traj.ra n1.ra k.ra ;\ 300s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -s -a traj.ra n2.ra x.ra ;\ 300s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -C -s7 n1.ra x.ra s1.ra ;\ 300s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -C -s7 k.ra n2.ra s2.ra ;\ 300s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 s1.ra s2.ra ;\ 300s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 301s Done. 301s Est. image size: 64x64x1 302s Done. 302s 0.000002 302s touch tests/test-nudft-adjoint 302s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -y55 t.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rss 1 t.ra w.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 1 0 32 t.ra t0.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 1 32 64 t.ra t1.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 1 64 96 t.ra t2.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 1 96 128 t.ra t3.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t t.ra -k k.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac k.ra w.ra kw.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 1 0 32 kw.ra k0.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 1 32 64 kw.ra k1.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 1 64 96 kw.ra k2.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 1 96 128 kw.ra k3.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -x128:128:1 -a t0.ra k0.ra x0.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -x128:128:1 -a t1.ra k1.ra x1.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -x128:128:1 -a t2.ra k2.ra x2.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -x128:128:1 -a t3.ra k3.ra x3.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//saxpy -- 1. x0.ra x1.ra xa.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//saxpy -- 1. x2.ra x3.ra xb.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//saxpy -- 1. xa.ra xb.ra x.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -x128:128:1 -a t.ra kw.ra r.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 r.ra x.ra ;\ 302s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 302s Done. 302s Done. 302s Done. 302s Done. 302s Done. 302s 0.000000 302s touch tests/test-nufft-adj-lin 302s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x64 -y11 traj.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -k -t traj.ra ksp.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -i -r traj.ra ksp.ra reco.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//repmat 3 2 ksp.ra ksp2.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -i -r traj.ra ksp2.ra reco2.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//repmat 3 2 reco.ra reco1.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0015 reco1.ra reco2.ra ;\ 302s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 302s Est. image size: 64x64x1 302s Done. 302s Est. image size: 64x64x1 302s Done. 302s 0.000373 302s touch tests/test-nufft-batch 302s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x128 -y128 traj.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom img.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 256 1 256 img.ra img2.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -r traj.ra img.ra ksp1.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -1 -r traj.ra img2.ra ksp2.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 ksp1.ra ksp2.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -a traj.ra ksp1.ra reco1.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -a -1 -r traj.ra ksp1.ra reco2a.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 128 1 128 reco2a.ra reco2.ra ;\ 302s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 reco1.ra reco2.ra ;\ 302s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 302s Done. 303s Done. 303s 0.000000 303s Est. image size: 128x128x1 303s Done. 303s Est. image size: 128x128x1 303s Done. 303s 0.000000 303s touch tests/test-nufft-over 303s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 4 1 128 128 3 z.ra ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s321 z.ra n2.ra ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x128 -y128 traj.ra ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -a traj.ra n2.ra x1.ra ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft --lowmem -a traj.ra n2.ra x2.ra ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 x1.ra x2.ra ;\ 303s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 303s Est. image size: 128x128x1 303s Done. 303s Est. image size: 128x128x1 303s Done. 303s 0.000000 303s touch tests/test-nufft-lowmem-adjoint 303s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x256 -y201 traj.ra ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -m5 -r -i traj2.ra ksp.ra reco1.ra ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -m5 --lowmem -r -i traj2.ra ksp.ra reco2.ra ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00006 reco1.ra reco2.ra ;\ 303s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 303s Est. image size: 128x128x1 303s Done. 303s Est. image size: 128x128x1 303s Done. 303s 0.000004 303s touch tests/test-nufft-lowmem-inverse 303s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 4 1 128 128 3 z.ra ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s321 z.ra n2.ra ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x128 -y128 traj.ra ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -a traj.ra n2.ra x1.ra ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft --no-precomp -a traj.ra n2.ra x2.ra ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 x1.ra x2.ra ;\ 303s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 303s Est. image size: 128x128x1 303s Done. 303s Est. image size: 128x128x1 303s Done. 303s 0.000001 303s touch tests/test-nufft-no-precomp-adjoint 303s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x256 -y201 traj.ra ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -m5 -r -i traj2.ra ksp.ra reco1.ra ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -m5 --no-precomp -r -i traj2.ra ksp.ra reco2.ra ;\ 303s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00006 reco1.ra reco2.ra ;\ 303s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 303s Est. image size: 128x128x1 303s Done. 303s Est. image size: 128x128x1 304s Done. 304s 0.000024 304s touch tests/test-nufft-no-precomp-inverse 304s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x256 -y201 traj.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -x128:130:1 -i traj2.ra ksp.ra reco.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft traj2.ra reco.ra k2.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.001 ksp.ra k2.ra ;\ 304s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 304s Done. 304s Done. 304s 0.000382 304s touch tests/test-nufft-inverse2 304s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x256 -y201 traj.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -x128:128:1 -i traj2.ra ksp.ra reco.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft traj2.ra reco.ra k2.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.001 ksp.ra k2.ra ;\ 304s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 304s Done. 304s Done. 304s 0.000504 304s touch tests/test-nufft-inverse3 304s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 4 1 128 128 3 z.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s321 z.ra n2.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x128 -y128 traj.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -a traj.ra n2.ra x1.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft --zero-mem -a traj.ra n2.ra x2.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 x1.ra x2.ra ;\ 304s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 304s Est. image size: 128x128x1 304s Done. 304s Est. image size: 128x128x1 304s Done. 304s 0.000001 304s touch tests/test-nufft-lowmem-zero-mem 304s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x64 -y64 traj.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s2 -k -ttraj.ra ksp.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -a -P -r traj.ra ksp.ra rec1.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -a -P -w8 -o1.5 -t traj.ra ksp.ra rec2.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 rec1.ra rec2.ra ;\ 304s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 304s Est. image size: 64x64x1 304s Done. 304s Est. image size: 64x64x1 304s Done. 304s 0.000005 304s touch tests/test-nufft-adjoint-os 304s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x64 -y64 traj.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s2 -x64 phan.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -P -r traj.ra phan.ra ksp1.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -P -w8 -o1.5 -t traj.ra phan.ra ksp2.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 ksp1.ra ksp2.ra ;\ 304s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 304s Done. 304s Done. 304s 0.000005 304s touch tests/test-nufft-forward-os 304s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -i 7 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_ksp.ra shepplogan_img.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.22 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra shepplogan_img.ra ;\ 304s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 304s 0.218492 304s touch tests/test-phantom-ksp 304s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj traj.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -k -t traj.ra shepplogan_ksp2.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//reshape 7 128 128 1 shepplogan_ksp2.ra shepplogan_ksp3.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_ksp.ra shepplogan_ksp3.ra ;\ 304s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 304s 0.000000 304s touch tests/test-phantom-noncart 304s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//coils.ra sl_coil2.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil.ra sl_coil2.ra ;\ 304s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 304s 0.000000 304s touch tests/test-phantom-coil 304s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -i 7 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra shepplogan_cimg.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.22 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil.ra shepplogan_cimg.ra ;\ 304s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 304s 0.214262 304s touch tests/test-phantom-ksp-coil 304s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -B -k k.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -i 3 k.ra x.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -B r.ra ;\ 304s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.21 r.ra x.ra ;\ 304s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 305s 0.207740 305s touch tests/test-phantom-bart 305s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 305s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -B -k k0.ra ;\ 305s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -B -b -k k1.ra ;\ 305s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -s 64 k1.ra k2.ra ;\ 305s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 k0.ra k2.ra ;\ 305s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 305s 0.000000 305s touch tests/test-phantom-bart-basis 305s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 305s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -T -k k0.ra ;\ 305s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -T -b -k k1.ra ;\ 305s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -s 64 k1.ra k2.ra ;\ 305s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 k0.ra k2.ra ;\ 305s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 306s 0.000000 306s touch tests/test-phantom-basis 306s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -N 5 -k k0.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -N 5 -b -k k1.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -s 64 k1.ra k2.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. k0.ra k2.ra ;\ 306s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 306s 0.000000 306s touch tests/test-phantom-random-tubes 306s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom --NIST -k k.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -i 3 k.ra x.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom --NIST r.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.14 r.ra x.ra ;\ 306s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 306s 0.126186 306s touch tests/test-phantom-NIST 306s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom --NIST -k k0.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom --NIST -b 11 -k k1.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -s 64 k1.ra k2.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 k0.ra k2.ra ;\ 306s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 306s 0.000000 306s touch tests/test-phantom-NIST-basis 306s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 21 -T o.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//flip 3 o.ra of.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 21 -T --rotation-angle 180 r.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 of.ra r.ra ;\ 306s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 306s 0.000000 306s touch tests/test-phantom-rotation-tubes 306s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 21 -k -T o.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//flip 3 o.ra of.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 21 -k -T --rotation-angle 180 r.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 of.ra r.ra ;\ 306s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 306s 0.000000 306s touch tests/test-phantom-rotation-tubes-kspace 306s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 21 -b -T o.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//flip 3 o.ra of.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 21 -b -T --rotation-angle 180 r.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 of.ra r.ra ;\ 306s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 306s 0.000000 306s touch tests/test-phantom-rotation-tubes-basis 306s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 21 --NIST o.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//flip 3 o.ra of.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 21 --NIST --rotation-angle 180 r.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 of.ra r.ra ;\ 306s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 306s 0.000000 306s touch tests/test-phantom-rotation-NIST 306s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 21 --NIST -k o.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//flip 3 o.ra of.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 21 --NIST -k --rotation-angle 180 r.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 of.ra r.ra ;\ 306s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 306s 0.000000 306s touch tests/test-phantom-rotation-NIST-kspace 306s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 21 --NIST -b o.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//flip 3 o.ra of.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 21 --NIST -b --rotation-angle 180 r.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 of.ra r.ra ;\ 306s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 306s 0.000000 306s touch tests/test-phantom-rotation-NIST-basis 306s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 21 -T --rotation-steps 4 --rotation-angle 90 o.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 10 0 o.ra o2.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//flip 3 o2.ra o2f.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 10 2 o.ra o3.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 o2f.ra o3.ra ;\ 306s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 306s 0.000000 306s touch tests/test-phantom-rotation-tubes-multistep 306s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 21 -k -T --rotation-steps 4 --rotation-angle 90 o.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 10 0 o.ra o2.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//flip 3 o2.ra o2f.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 10 2 o.ra o3.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 o2f.ra o3.ra ;\ 306s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 306s 0.000000 306s touch tests/test-phantom-rotation-tubes-kspace-multistep 306s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 21 -k -T k.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 21 -k -b -T --rotation-steps 4 --rotation-angle 90 k2.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -s 64 k2.ra o.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 10 1 o.ra o2.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//flip 3 k.ra kf.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 kf.ra o2.ra ;\ 306s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 306s 0.000000 306s touch tests/test-phantom-rotation-tubes-basis-multistep 306s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 21 --NIST --rotation-steps 4 --rotation-angle 90 o.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 10 0 o.ra o2.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//flip 3 o2.ra o2f.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 10 2 o.ra o3.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 o2f.ra o3.ra ;\ 306s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 306s 0.000000 306s touch tests/test-phantom-rotation-NIST-multistep 306s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 21 -k --NIST --rotation-steps 4 --rotation-angle 90 o.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 10 0 o.ra o2.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//flip 3 o2.ra o2f.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 10 2 o.ra o3.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 o2f.ra o3.ra ;\ 306s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 306s 0.000000 306s touch tests/test-phantom-rotation-NIST-kspace-multistep 306s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 21 -k --NIST k.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 21 -k -b --NIST --rotation-steps 4 --rotation-angle 90 k2.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -s 64 k2.ra o.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 10 1 o.ra o2.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//flip 3 k.ra kf.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 kf.ra o2.ra ;\ 306s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 306s 0.000000 306s touch tests/test-phantom-rotation-NIST-basis-multistep 306s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom --SONAR -k k.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -i 3 k.ra x.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom --SONAR r.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.14 r.ra x.ra ;\ 306s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 306s 0.127773 306s touch tests/test-phantom-SONAR 306s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom --SONAR -k k0.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom --SONAR -b 11 -k k1.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -s 64 k1.ra k2.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 k0.ra k2.ra ;\ 306s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 306s 0.000000 306s touch tests/test-phantom-SONAR-basis 306s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 21 --SONAR o.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//flip 3 o.ra of.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 21 --SONAR --rotation-angle 180 r.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 of.ra r.ra ;\ 306s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 306s 0.000000 306s touch tests/test-phantom-rotation-SONAR 306s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 21 --SONAR --rotation-steps 4 --rotation-angle 90 o.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 10 0 o.ra o2.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//flip 3 o2.ra o2f.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 10 2 o.ra o3.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 o2f.ra o3.ra ;\ 306s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 306s 0.000000 306s touch tests/test-phantom-rotation-SONAR-multistep 306s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom --BRAIN -k k.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -i 3 k.ra x.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom --BRAIN r.ra ;\ 306s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.2 r.ra x.ra ;\ 306s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 320s 0.063983 320s touch tests/test-phantom-brain 320s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 320s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom --BRAIN -k k0.ra ;\ 320s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom --BRAIN -b -k k1.ra ;\ 320s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//index 6 5 ind.ra ;\ 320s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 6 1 5 ind.ra ind2.ra ;\ 320s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -s 64 k1.ra ind2.ra k2.ra ;\ 320s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 k0.ra k2.ra ;\ 320s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 349s 0.000000 349s touch tests/test-phantom-BRAIN-basis 349s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom --coil HEAD_3D_64CH -s64 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_large.ra 351s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom --coil HEAD_3D_64CH -S64 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//coils_large.ra 354s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 354s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//coils_large.ra sl_coil2.ra ;\ 354s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_large.ra sl_coil2.ra ;\ 354s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 354s 0.000000 354s touch tests/test-phantom-coil-large 354s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom --coil HEAD_3D_64CH -s64 -k /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp_large.ra 416s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 416s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -i 7 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp_large.ra shepplogan_cimg.ra ;\ 416s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.22 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_large.ra shepplogan_cimg.ra ;\ 416s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 416s 0.214592 416s touch tests/test-phantom-ksp-coil-large 416s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 416s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom --FILE /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests//geom/flower -k k.ra ;\ 416s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -i 3 k.ra x.ra ;\ 416s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom --FILE /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests//geom/flower r.ra ;\ 416s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.16 r.ra x.ra ;\ 416s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 416s 0.124074 416s touch tests/test-phantom-FILE 416s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 416s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom --FILE /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests//geom/flower2 -k k.ra ;\ 416s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom --FILE /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests//geom/flower2 -b -k k1.ra ;\ 416s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -s 64 k1.ra k2.ra ;\ 416s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 k.ra k2.ra ;\ 416s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 418s 0.000000 418s touch tests/test-phantom-FILE-basis 418s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 418s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom --FILE /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests//geom/flower r.ra ;\ 418s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac r.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//coils_large.ra sl_coil2.ra ;\ 418s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom --coil HEAD_3D_64CH -s64 --FILE /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests//geom/flower rc.ra ;\ 418s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 rc.ra sl_coil2.ra ;\ 418s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 422s 0.000000 422s touch tests/test-phantom-FILE-coil-large 422s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -k -x 32 -3 --ELLIPSOID --ellipsoid_center 16:16:5 --ellipsoid_axes 10:5:20 --rotation-angle 30 k.ra ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -i 7 k.ra x.ra ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 2 5 x.ra x_s.ra ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 32 --ELLIPSOID --ellipsoid_center 16:16:5 --ellipsoid_axes 10:5:20 --rotation-angle 30 x2d.ra ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.22 x2d.ra x_s.ra ;\ 422s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 422s 0.212496 422s touch tests/test-phantom-ellipsoid 422s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -S -r0.001 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//coils.ra reco.ra ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 128. reco.ra reco2.ra ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.23 reco2.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra ;\ 422s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 422s Size: 16384 Samples: 16384 Acc: 1.00 422s l2 regularization: 0.001000 422s Regularization terms: 1, Supporting variables: 0 422s conjugate gradients 422s Total Time: 0.060569 422s 0.220259 422s touch tests/test-pics-pi 422s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x256 -y64 traj.ra ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 128 128 1 o.ra ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -S -r0.001 -t traj2.ra ksp.ra o.ra reco.ra ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft traj2.ra reco.ra k2.ra ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.002 ksp.ra k2.ra ;\ 422s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 422s [ 1 256 64 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 422s [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 422s l2 regularization: 0.001000 422s Regularization terms: 1, Supporting variables: 0 422s conjugate gradients 422s Total Time: 0.080503 422s Done. 422s 0.000924 422s touch tests/test-pics-noncart 422s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x256 -y48 traj.ra ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 128 128 1 o.ra ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -S -RT:7:0:0.001 -u0.1 -e -t traj2.ra ksp.ra o.ra reco.ra ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 128. reco.ra reco2.ra ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.22 reco2.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra ;\ 422s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 422s [ 1 256 48 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 422s [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 422s Maximum eigenvalue: 9.27e+01 422s TV regularization: 0.001000 422s Regularization terms: 1, Supporting variables: 0 422s ADMM 422s Total Time: 0.114111 422s 0.205962 422s touch tests/test-pics-cs 422s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x256 -y32 traj.ra ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s8 -t traj2.ra ksp.ra ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -S -RT:7:0:0.001 -u1000000000. -e -t traj2.ra ksp.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//coils.ra reco.ra ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 128. reco.ra reco2.ra ;\ 422s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.22 reco2.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra ;\ 422s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 423s [ 1 256 32 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 423s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 423s Maximum eigenvalue: 1.00e+12 423s TV regularization: 0.001000 423s Regularization terms: 1, Supporting variables: 0 423s ADMM 424s Total Time: 0.295092 424s 0.219251 424s touch tests/test-pics-pics 424s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 424s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//poisson -Y128 -Z128 -y1.2 -z1.2 -e -v -C24 p.ra ;\ 424s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//squeeze p.ra p2.ra ;\ 424s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u 7 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra ksp1.ra ;\ 424s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac ksp1.ra p2.ra ksp.ra ;\ 424s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 128 128 1 o.ra ;\ 424s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -S -RW:3:0:0.01 -i50 ksp.ra o.ra reco.ra ;\ 424s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.22 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra reco.ra ;\ 424s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 424s points: 2225, grid size: 128x128x(pi/4) = 12867 (R = 5.783355) 424s Size: 16384 Samples: 2216 Acc: 7.39 424s l1-wavelet regularization: 0.010000 424s Regularization terms: 1, Supporting variables: 0 424s FISTA 424s Total Time: 0.130587 424s 0.203429 424s touch tests/test-pics-poisson-wavl1 424s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 424s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//poisson -Y128 -Z128 -y1.1 -z1.1 -e -v -C24 -T2 p.ra ;\ 424s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//reshape 63 128 128 1 1 1 2 p.ra p2.ra ;\ 424s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u 7 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra ksp1.ra ;\ 424s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac ksp1.ra p2.ra ksp.ra ;\ 424s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 128 128 1 o.ra ;\ 424s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -S -RW:3:32:0.02 -i50 ksp.ra o.ra reco2.ra ;\ 424s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 0 reco2.ra reco.ra ;\ 424s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.22 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra reco.ra ;\ 424s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 427s points: 3713, classes: 2, grid size: 128x128x(pi/4) = 12867 (R = 6.931303) 427s Size: 32768 Samples: 3695 Acc: 8.87 427s l1-wavelet regularization: 0.020000 427s Regularization terms: 1, Supporting variables: 0 427s FISTA 427s Total Time: 0.175262 427s 0.212444 427s touch tests/test-pics-joint-wavl1 427s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 50 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra shepp.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u 7 shepp.ra ksp1.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s 1 -n 1 ksp1.ra ksp2.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 128 128 1 o.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//upat -Y 128 -Z 128 -y 2 -z 2 pat.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//squeeze pat.ra pat.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac ksp2.ra pat.ra ksp3.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -a -P 64 -w1. -n -RW:3:0:1. -i50 ksp3.ra o.ra reco.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -m -P 64 -w1. -n -RW:3:0:1. -i100 -u .5 ksp3.ra o.ra reco2.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u 3 reco.ra kreco.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//saxpy -- -1 kreco.ra ksp3.ra ereco.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac ereco.ra pat.ra preco.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -C -s 3 preco.ra preco.ra e.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u 3 reco2.ra kreco2.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//saxpy -- -1 kreco2.ra ksp3.ra ereco2.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac ereco2.ra pat.ra preco2.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -C -s 3 preco2.ra preco2.ra e2.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//vec 4096 f.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t .001 f.ra e.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t .002 f.ra e2.ra ;\ 427s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 427s Basis Pursuit formulation 427s Size: 16384 Samples: 4096 Acc: 4.00 427s l1-wavelet regularization: 1.000000 427s Regularization terms: 2, Supporting variables: 0 427s Primal Dual 427s Total Time: 0.139058 427s Basis Pursuit formulation 427s Size: 16384 Samples: 4096 Acc: 4.00 427s l1-wavelet regularization: 1.000000 427s Regularization terms: 2, Supporting variables: 0 427s ADMM 427s Total Time: 0.220378 427s 0.000169 427s 0.000561 427s touch tests/test-pics-bpwavl1 427s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 128 128 weights.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 weights.ra weights2.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -S -r0.001 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//coils.ra reco1.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -S -r0.001 -p weights2.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//coils.ra reco2.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 reco2.ra reco1.ra ;\ 427s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 427s Size: 16384 Samples: 16384 Acc: 1.00 427s l2 regularization: 0.001000 427s Regularization terms: 1, Supporting variables: 0 427s conjugate gradients 427s Total Time: 0.046937 427s Size: 16384 Samples: 4096 Acc: 4.00 427s l2 regularization: 0.001000 427s Regularization terms: 1, Supporting variables: 0 427s conjugate gradients 427s Total Time: 0.039431 427s 0.000000 427s touch tests/test-pics-weights 427s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x256 -y32 traj.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s8 -t traj2.ra ksp.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 4 1 256 32 1 weights.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 weights.ra weights2.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -S -r0.001 -p weights2.ra -t traj2.ra ksp.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//coils.ra reco1.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -S -r0.001 -t traj2.ra ksp.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//coils.ra reco2.ra ;\ 427s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.010 reco1.ra reco2.ra ;\ 427s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 428s [ 1 256 32 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 428s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 428s l2 regularization: 0.001000 428s Regularization terms: 1, Supporting variables: 0 428s conjugate gradients 428s Total Time: 0.163999 428s [ 1 256 32 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 428s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 428s l2 regularization: 0.001000 428s Regularization terms: 1, Supporting variables: 0 428s conjugate gradients 428s Total Time: 0.164020 428s 0.000374 428s touch tests/test-pics-noncart-weights 428s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 428s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 128 128 1 o.ra ;\ 428s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -i0 -Wo.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//coils.ra reco.ra ;\ 428s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. o.ra reco.ra ;\ 428s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 428s Size: 16384 Samples: 16384 Acc: 1.00 428s Regularization terms: 0, Supporting variables: 0 428s conjugate gradients 428s Total Time: 0.020919 428s 0.000000 428s touch tests/test-pics-warmstart 428s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 428s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s4 -m coils.ra ;\ 428s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -m img.ra ;\ 428s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac img.ra coils.ra cimg.ra ;\ 428s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u 7 cimg.ra ksp.ra ;\ 428s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -i10 -w 1. -m ksp.ra coils.ra reco.ra ;\ 428s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.01 img.ra reco.ra ;\ 428s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 430s Size: 524288 Samples: 524287 Acc: 1.00 430s Regularization terms: 0, Supporting variables: 0 430s ADMM 430s Total Time: 0.540144 430s 0.004186 430s touch tests/test-pics-timedim 430s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 430s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x256 -y64 traj.ra ;\ 430s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 430s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 430s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 128 128 1 o.ra ;\ 430s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -e -S -RW:3:0:0.0001 -t traj2.ra ksp.ra o.ra reco1.ra ;\ 430s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -e -a -P0.1 -S -RW:3:0:0.0001 -t traj2.ra ksp.ra o.ra reco2.ra ;\ 430s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.09 reco1.ra reco2.ra ;\ 430s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 430s [ 1 256 64 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 430s [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 430s Maximum eigenvalue: 1.24e+02 430s l1-wavelet regularization: 0.000100 430s Regularization terms: 1, Supporting variables: 0 430s FISTA 431s Total Time: 0.153849 431s Basis Pursuit formulation 431s [ 1 256 64 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 431s [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 431s l1-wavelet regularization: 0.000100 431s Regularization terms: 2, Supporting variables: 0 431s Primal Dual 431s Estimating max eigenvalue... 431s Max eigenvalue: 1.236009e+02 431s Total Time: 0.666784 431s 0.081534 431s touch tests/test-pics-bp-noncart 431s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 431s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -S /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//coils.ra gold.ra ;\ 431s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//delta 16 33 128 p.ra ;\ 431s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra p.ra pk.ra ;\ 431s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 6 1 1 1 1 1 128 o.ra ;\ 431s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//repmat 6 2 o.ra o2.ra ;\ 431s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -S -Bo2.ra pk.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//coils.ra reco.ra ;\ 431s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 2. reco.ra reco2.ra ;\ 431s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 6 0 reco2.ra reco20.ra ;\ 431s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 gold.ra reco20.ra ;\ 431s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 431s Size: 16384 Samples: 16384 Acc: 1.00 431s Regularization terms: 0, Supporting variables: 0 431s conjugate gradients 431s Total Time: 0.047155 431s Basis: [128 128 1 8 1 128 2 1 1 1 1 1 1 1 1 1 ] 431s Max: [128 128 1 8 1 1 2 1 1 1 1 1 1 1 1 1 ] 432s Size: 2097152 Samples: 16384 Acc: 128.00 432s Regularization terms: 0, Supporting variables: 0 432s conjugate gradients 438s Total Time: 6.287822 438s 0.000000 438s touch tests/test-pics-basis 438s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x256 -D -y31 traj.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//delta 16 36 31 p.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac ksp.ra p.ra pk.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//repmat 1 256 p.ra p2.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 6 1 1 1 1 1 31 o.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//repmat 6 2 o.ra o2.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 128 128 1 coils.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -r0.001 -t traj2.ra -pp2.ra -Bo2.ra pk.ra coils.ra reco1.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -r0.001 -t traj2.ra ksp.ra coils.ra reco.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 2. reco1.ra reco2.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 6 0 reco2.ra reco20.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.002 reco.ra reco20.ra ;\ 438s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 438s Basis: [128 128 1 1 1 31 2 1 1 1 1 1 1 1 1 1 ] 438s Max: [128 128 1 1 1 1 2 1 1 1 1 1 1 1 1 1 ] 438s [ 1 256 31 1 1 31 2 1 1 1 1 1 1 1 1 1 ] 438s [128 128 1 1 1 1 2 1 1 1 1 1 1 1 1 1 ] 438s l2 regularization: 0.001000 438s Regularization terms: 1, Supporting variables: 0 438s conjugate gradients 438s Total Time: 0.163891 438s [ 1 256 31 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 438s [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 438s l2 regularization: 0.001000 438s Regularization terms: 1, Supporting variables: 0 438s conjugate gradients 438s Total Time: 0.064494 438s 0.001165 438s touch tests/test-pics-basis-noncart 438s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x256 -D -y31 traj.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 7 1 1 1 1 1 31 2 o.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 128 128 1 coils.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//transpose 2 5 traj2.ra traj3.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//transpose 2 5 ksp.ra ksp1.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -r0.001 -t traj3.ra -Bo.ra ksp1.ra coils.ra reco1.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -r0.001 -t traj2.ra ksp.ra coils.ra reco.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 2. reco1.ra reco2.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 6 0 reco2.ra reco20.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.002 reco.ra reco20.ra ;\ 438s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 438s Basis: [128 128 1 1 1 31 2 1 1 1 1 1 1 1 1 1 ] 438s Max: [128 128 1 1 1 1 2 1 1 1 1 1 1 1 1 1 ] 438s [ 1 256 1 1 1 31 2 1 1 1 1 1 1 1 1 1 ] 438s [128 128 1 1 1 1 2 1 1 1 1 1 1 1 1 1 ] 438s l2 regularization: 0.001000 438s Regularization terms: 1, Supporting variables: 0 438s conjugate gradients 438s Total Time: 0.123325 438s [ 1 256 31 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 438s [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 438s l2 regularization: 0.001000 438s Regularization terms: 1, Supporting variables: 0 438s conjugate gradients 438s Total Time: 0.075366 438s 0.000537 438s touch tests/test-pics-basis-noncart-memory 438s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x256 -D -y31 traj.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//delta 16 36 31 p.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac ksp.ra p.ra pk.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//repmat 1 256 p.ra p2.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 7 1 1 1 1 1 31 2 o.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 128 128 1 coils.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -S -r0.001 -t traj2.ra -pp2.ra -Bo.ra pk.ra coils.ra reco.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -s $(/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bitmask 6) reco.ra o.ra reco2.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft traj2.ra reco2.ra k2.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac k2.ra p2.ra pk2.ra ;\ 438s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.003 pk.ra pk2.ra ;\ 438s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 438s Basis: [128 128 1 1 1 31 2 1 1 1 1 1 1 1 1 1 ] 438s Max: [128 128 1 1 1 1 2 1 1 1 1 1 1 1 1 1 ] 438s [ 1 256 31 1 1 31 2 1 1 1 1 1 1 1 1 1 ] 438s [128 128 1 1 1 1 2 1 1 1 1 1 1 1 1 1 ] 438s l2 regularization: 0.001000 438s Regularization terms: 1, Supporting variables: 0 438s conjugate gradients 439s Total Time: 0.166311 439s Done. 439s 0.001225 439s touch tests/test-pics-basis-noncart2 439s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 439s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -y55 -m2 -r t.ra ;\ 439s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 13 0 t.ra t0.ra ;\ 439s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 13 1 t.ra t1.ra ;\ 439s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t t0.ra -s8 -k k0.ra ;\ 439s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t t1.ra -s8 -k k1.ra ;\ 439s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//conj k1.ra k1C.ra ;\ 439s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 13 k0.ra k1C.ra k.ra ;\ 439s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -n 8192 k.ra kk.ra ;\ 439s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -S8 s.ra ;\ 439s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//flip 7 s.ra sF.ra ;\ 439s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//conj sF.ra sFC.ra ;\ 439s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 13 s.ra sFC.ra ss.ra ;\ 439s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -t t.ra -M kk.ra ss.ra x.ra ;\ 439s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 13 0 x.ra x0.ra ;\ 439s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 13 1 x.ra x1.ra ;\ 439s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -k rk.ra ;\ 439s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//conj rk.ra rkc.ra ;\ 439s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -i 7 rk.ra r0.ra ;\ 439s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -i 7 rkc.ra r1.ra ;\ 439s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 13 r0.ra r1.ra r.ra ;\ 439s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -s -t 0.15 r.ra x.ra ;\ 439s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 440s SMS reconstruction: MB = 2 440s [ 1 128 55 8 1 1 1 1 1 1 1 1 1 2 1 1 ] 440s [128 128 1 8 1 1 1 1 1 1 1 1 1 2 1 1 ] 440s Regularization terms: 0, Supporting variables: 0 440s conjugate gradients 440s Total Time: 0.305470 441s Scaled by: 0.000000-0.000000i 441s 0.147492 441s touch tests/test-pics-noncart-sms 441s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 441s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -D -y15 -o2. traj.ra ;\ 441s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t traj.ra ksp.ra ;\ 441s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -S1 o.ra ;\ 441s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -S -r0.001 --psf_export=p.ra -t traj.ra ksp.ra o.ra reco1.ra ;\ 441s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -S -r0.001 --psf_import=p.ra -t traj.ra ksp.ra o.ra reco2.ra ;\ 441s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.006 reco1.ra reco2.ra ;\ 441s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 441s [ 1 256 15 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 441s [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 441s l2 regularization: 0.001000 441s Regularization terms: 1, Supporting variables: 0 441s conjugate gradients 441s Total Time: 0.066979 441s [ 1 256 15 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 441s [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 441s l2 regularization: 0.001000 441s Regularization terms: 1, Supporting variables: 0 441s conjugate gradients 441s Total Time: 0.033989 441s 0.000440 441s touch tests/test-pics-psf 441s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 441s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s2 x.ra ;\ 441s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 3 0 x.ra x0.ra ;\ 441s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -n 1000000. x0.ra x0n.ra ;\ 441s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u 3 x0n.ra k0n.ra ;\ 441s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 128 128 o.ra ;\ 441s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -w1. -i100 -u0.1 -S -RG:3:0:750. k0n.ra o.ra x.ra ;\ 441s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//tgv 750 3 x0n.ra xg.ra ;\ 441s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 15 0 xg.ra xg0.ra ;\ 441s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 xg0.ra x.ra ;\ 441s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 441s Size: 16384 Samples: 16384 Acc: 1.00 441s TGV regularization: 750.000000 441s Regularization terms: 2, Supporting variables: 2 441s ADMM 441s Total Time: 0.471394 442s 0.000000 442s touch tests/test-pics-tgv 442s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 442s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s2 x.ra ;\ 442s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 3 0 x.ra x0.ra ;\ 442s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -n 1000000. x0.ra x0n.ra ;\ 442s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u 3 x0n.ra k0n.ra ;\ 442s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 128 128 o.ra ;\ 442s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -w1. -i100 -u0.1 -S -RG:3:0:375. -RG:3:0:375. k0n.ra o.ra x.ra ;\ 442s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//tgv 750 3 x0n.ra xg.ra ;\ 442s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 15 0 xg.ra xg0.ra ;\ 442s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.01 xg0.ra x.ra ;\ 442s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 442s Size: 16384 Samples: 16384 Acc: 1.00 442s TGV regularization: 375.000000 442s TGV regularization: 375.000000 442s Regularization terms: 4, Supporting variables: 4 442s ADMM 443s Total Time: 0.828192 443s 0.003523 443s touch tests/test-pics-tgv2 443s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 443s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x256 -y48 traj.ra ;\ 443s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 443s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 443s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 128 128 1 o.ra ;\ 443s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -S --wavelet=dau2 -RW:3:0:0.001 -i150 -e -t traj2.ra ksp.ra o.ra reco.ra ;\ 443s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 128. reco.ra reco2.ra ;\ 443s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.23 reco2.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra ;\ 443s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 443s [ 1 256 48 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 443s [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 443s Maximum eigenvalue: 9.27e+01 443s l1-wavelet regularization: 0.001000 443s Regularization terms: 1, Supporting variables: 0 443s FISTA 444s Total Time: 0.422643 444s 0.226647 444s touch tests/test-pics-wavl1-dau2 444s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 444s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x256 -y48 traj.ra ;\ 444s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 444s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 444s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 128 128 1 o.ra ;\ 444s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -S --wavelet=cdf44 -RW:3:0:0.001 -i150 -e -t traj2.ra ksp.ra o.ra reco.ra ;\ 444s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 128. reco.ra reco2.ra ;\ 444s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.235 reco2.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra ;\ 444s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 444s [ 1 256 48 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 444s [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 444s Maximum eigenvalue: 9.27e+01 444s l1-wavelet regularization: 0.001000 444s Regularization terms: 1, Supporting variables: 0 444s FISTA 444s Total Time: 0.585329 444s 0.231131 444s touch tests/test-pics-wavl1-cdf44 444s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 444s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x256 -y48 traj.ra ;\ 444s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 444s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t traj2.ra ksp.ra ;\ 444s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 128 128 1 o.ra ;\ 444s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -S --wavelet=haar -RW:3:0:0.001 -i150 -e -t traj2.ra ksp.ra o.ra reco.ra ;\ 444s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 128. reco.ra reco2.ra ;\ 444s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.22 reco2.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra ;\ 444s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 444s [ 1 256 48 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 444s [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 444s Maximum eigenvalue: 9.27e+01 444s l1-wavelet regularization: 0.001000 444s Regularization terms: 1, Supporting variables: 0 444s FISTA 445s Total Time: 0.387393 446s 0.216492 446s touch tests/test-pics-wavl1-haar 446s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 446s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -y55 -r t0.ra ;\ 446s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -y55 -G -r t1.ra ;\ 446s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t t0.ra -s8 -k k0.ra ;\ 446s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -T -t t1.ra -s8 -k k1C.ra ;\ 446s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//conj k1C.ra k1.ra ;\ 446s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -S8 s0.ra ;\ 446s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//conj s0.ra s1.ra ;\ 446s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 8 k0.ra k1.ra k.ra ;\ 446s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 8 s0.ra s1.ra s.ra ;\ 446s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 8 t0.ra t1.ra t.ra ;\ 446s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -i2 -t t.ra k.ra s.ra r1.ra ;\ 446s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics --lowmem -i2 -t t.ra k.ra s.ra r2.ra ;\ 446s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -s -t 0.000002 r1.ra r2.ra ;\ 446s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -t t.ra k.ra s.ra r1.ra ;\ 446s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics --lowmem -t t.ra k.ra s.ra r2.ra ;\ 446s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -s -t 0.005 r1.ra r2.ra ;\ 446s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 447s [ 1 128 55 8 1 1 1 1 2 1 1 1 1 1 1 1 ] 447s [128 128 1 8 1 1 1 1 2 1 1 1 1 1 1 1 ] 448s Regularization terms: 0, Supporting variables: 0 448s conjugate gradients 448s Total Time: 0.149952 448s [ 1 128 55 8 1 1 1 1 2 1 1 1 1 1 1 1 ] 448s [128 128 1 8 1 1 1 1 2 1 1 1 1 1 1 1 ] 448s Regularization terms: 0, Supporting variables: 0 448s conjugate gradients 448s Total Time: 0.173960 448s Scaled by: 1.000004-0.000000i 448s 0.000001 448s [ 1 128 55 8 1 1 1 1 2 1 1 1 1 1 1 1 ] 448s [128 128 1 8 1 1 1 1 2 1 1 1 1 1 1 1 ] 448s Regularization terms: 0, Supporting variables: 0 448s conjugate gradients 448s Total Time: 0.303934 448s [ 1 128 55 8 1 1 1 1 2 1 1 1 1 1 1 1 ] 448s [128 128 1 8 1 1 1 1 2 1 1 1 1 1 1 1 ] 448s Regularization terms: 0, Supporting variables: 0 448s conjugate gradients 448s Total Time: 0.314992 448s Scaled by: 1.000139-0.000029i 448s 0.001506 448s touch tests/test-pics-noncart-lowmem 448s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 448s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -y55 -r t0.ra ;\ 448s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t t0.ra -s8 -k k0.ra ;\ 448s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -S8 s0.ra ;\ 448s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -r0.01 -i2 -t t0.ra k0.ra s0.ra r1.ra ;\ 448s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -r0.01 --lowmem-stack=256 -i2 -t t0.ra k0.ra s0.ra r2.ra ;\ 448s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -s -t 0.000005 r1.ra r2.ra ;\ 448s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -r0.01 -t t0.ra k0.ra s0.ra r1.ra ;\ 448s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -r0.01 --lowmem-stack=256 -t t0.ra k0.ra s0.ra r2.ra ;\ 448s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -s -t 0.005 r1.ra r2.ra ;\ 448s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 449s [ 1 128 55 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 449s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 449s l2 regularization: 0.010000 449s Regularization terms: 1, Supporting variables: 0 449s conjugate gradients 449s Total Time: 0.082949 449s [ 1 128 55 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 449s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 449s l2 regularization: 0.010000 449s Regularization terms: 1, Supporting variables: 0 449s conjugate gradients 449s Total Time: 0.097477 449s Scaled by: 1.000005+0.000000i 449s 0.000001 449s [ 1 128 55 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 449s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 449s l2 regularization: 0.010000 449s Regularization terms: 1, Supporting variables: 0 449s conjugate gradients 450s Total Time: 0.158646 450s [ 1 128 55 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 450s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 450s l2 regularization: 0.010000 450s Regularization terms: 1, Supporting variables: 0 450s conjugate gradients 450s Total Time: 0.309358 450s Scaled by: 0.999674+0.000036i 450s 0.004262 450s touch tests/test-pics-noncart-lowmem-stack0 450s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 450s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -y55 -r t0.ra ;\ 450s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -y55 -G -r t1.ra ;\ 450s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t t0.ra -s8 -k k0.ra ;\ 450s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -T -t t1.ra -s8 -k k1C.ra ;\ 450s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//conj k1C.ra k1.ra ;\ 450s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -S8 s0.ra ;\ 450s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//conj s0.ra s1.ra ;\ 450s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 8 k0.ra k1.ra k.ra ;\ 450s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 8 s0.ra s1.ra s.ra ;\ 450s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 8 t0.ra t1.ra t.ra ;\ 450s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -i2 -t t.ra k.ra s.ra r1.ra ;\ 450s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics --lowmem-stack=256 -i2 -t t.ra k.ra s.ra r2.ra ;\ 450s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -s -t 0.00001 r1.ra r2.ra ;\ 450s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -i2 -t t.ra k.ra s.ra r1.ra ;\ 450s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics --lowmem-stack=256 -i2 -t t.ra k.ra s.ra r2.ra ;\ 450s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -s -t 0.005 r1.ra r2.ra ;\ 450s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 453s [ 1 128 55 8 1 1 1 1 2 1 1 1 1 1 1 1 ] 453s [128 128 1 8 1 1 1 1 2 1 1 1 1 1 1 1 ] 453s Regularization terms: 0, Supporting variables: 0 453s conjugate gradients 453s Total Time: 0.159161 453s [ 1 128 55 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 453s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 453s [ 1 128 55 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 453s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 453s Regularization terms: 0, Supporting variables: 0 453s conjugate gradients 453s Total Time: 0.164501 453s Scaled by: 1.000005-0.000000i 453s 0.000001 453s [ 1 128 55 8 1 1 1 1 2 1 1 1 1 1 1 1 ] 453s [128 128 1 8 1 1 1 1 2 1 1 1 1 1 1 1 ] 453s Regularization terms: 0, Supporting variables: 0 453s conjugate gradients 453s Total Time: 0.145637 453s [ 1 128 55 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 453s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 453s [ 1 128 55 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 453s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 453s Regularization terms: 0, Supporting variables: 0 453s conjugate gradients 453s Total Time: 0.176491 453s Scaled by: 1.000005-0.000000i 453s 0.000001 453s touch tests/test-pics-noncart-lowmem-stack1 453s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 453s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -y55 -r t0.ra ;\ 453s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -y55 -G -r t1.ra ;\ 453s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t t0.ra -s8 -k k0.ra ;\ 453s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -T -t t1.ra -s8 -k k1C.ra ;\ 453s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//conj k1C.ra k1.ra ;\ 453s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -S8 s0.ra ;\ 453s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//conj s0.ra s1.ra ;\ 453s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 8 k0.ra k1.ra k.ra ;\ 453s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 8 s0.ra s1.ra s.ra ;\ 453s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 8 t0.ra t1.ra t.ra ;\ 453s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -i2 -t t.ra k.ra s.ra r1.ra ;\ 453s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics --lowmem-stack=264 -i2 -t t.ra k.ra s.ra r2.ra ;\ 453s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -s -t 0.00005 r1.ra r2.ra ;\ 453s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -t t.ra k.ra s.ra r1.ra ;\ 453s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics --lowmem-stack=264 -t t.ra k.ra s.ra r2.ra ;\ 453s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -s -t 0.005 r1.ra r2.ra ;\ 453s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 456s [ 1 128 55 8 1 1 1 1 2 1 1 1 1 1 1 1 ] 456s [128 128 1 8 1 1 1 1 2 1 1 1 1 1 1 1 ] 456s Regularization terms: 0, Supporting variables: 0 456s conjugate gradients 456s Total Time: 0.152236 456s [ 1 128 55 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 456s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 456s [ 1 128 55 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 456s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 456s Regularization terms: 0, Supporting variables: 0 456s conjugate gradients 457s Total Time: 0.355799 457s Scaled by: 1.000005-0.000000i 457s 0.000001 457s [ 1 128 55 8 1 1 1 1 2 1 1 1 1 1 1 1 ] 457s [128 128 1 8 1 1 1 1 2 1 1 1 1 1 1 1 ] 457s Regularization terms: 0, Supporting variables: 0 457s conjugate gradients 457s Total Time: 0.297989 457s [ 1 128 55 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 457s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 457s [ 1 128 55 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 457s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 457s Regularization terms: 0, Supporting variables: 0 457s conjugate gradients 458s Total Time: 1.435385 458s Scaled by: 1.000092-0.000052i 458s 0.000634 458s touch tests/test-pics-noncart-lowmem-stack2 458s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 458s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -y55 -r t0.ra ;\ 458s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t t0.ra -s8 -k k0.ra ;\ 458s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -S8 s0.ra ;\ 458s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -r0.01 -i2 -t t0.ra k0.ra s0.ra r1.ra ;\ 458s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -r0.01 --lowmem-stack=256 --no-toeplitz -i2 -t t0.ra k0.ra s0.ra r2.ra ;\ 458s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -s -t 0.00005 r1.ra r2.ra ;\ 458s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -r0.01 -t t0.ra k0.ra s0.ra r1.ra ;\ 458s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -r0.01 --lowmem-stack=256 --no-toeplitz -t t0.ra k0.ra s0.ra r2.ra ;\ 458s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -s -t 0.005 r1.ra r2.ra ;\ 458s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 459s [ 1 128 55 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 459s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 459s l2 regularization: 0.010000 459s Regularization terms: 1, Supporting variables: 0 459s conjugate gradients 459s Total Time: 0.086421 459s [ 1 128 55 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 459s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 459s l2 regularization: 0.010000 459s Regularization terms: 1, Supporting variables: 0 459s conjugate gradients 459s Total Time: 0.141332 459s Scaled by: 1.000001+0.000000i 459s 0.000023 459s [ 1 128 55 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 459s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 459s l2 regularization: 0.010000 459s Regularization terms: 1, Supporting variables: 0 459s conjugate gradients 459s Total Time: 0.161488 459s [ 1 128 55 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 459s [128 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 459s l2 regularization: 0.010000 459s Regularization terms: 1, Supporting variables: 0 459s conjugate gradients 460s Total Time: 0.820711 460s Scaled by: 0.999987+0.000028i 460s 0.001304 460s touch tests/test-pics-noncart-lowmem-no-toeplitz 460s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 460s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x64 -o2 -y13 -t3 t.ra ;\ 460s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -N2 -b -t t.ra -s8 -k k0.ra ;\ 460s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 1 1 one.ra ;\ 460s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- -1. one.ra mone.ra ;\ 460s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- -2. one.ra mtwo.ra ;\ 460s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 2. one.ra two.ra ;\ 460s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 10 one.ra one.ra mone.ra scl1.ra ;\ 460s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 10 two.ra mtwo.ra two.ra scl2.ra ;\ 460s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 6 scl1.ra scl2.ra scl.ra ;\ 460s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -s $(/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bitmask 6) scl.ra k0.ra k.ra ;\ 460s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 64 64 phmap0.ra ;\ 460s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -N2 -b -x64 i.ra ;\ 460s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac -s $(/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bitmask 6) scl.ra i.ra ref1.ra ;\ 460s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 10 0 ref1.ra ref.ra ;\ 460s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 6 0 i.ra i1.ra ;\ 460s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 6 1 i.ra i2.ra ;\ 460s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//saxpy -- -2 i2.ra phmap0.ra phmap1.ra ;\ 460s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//saxpy -- -2 i1.ra phmap0.ra phmap2.ra ;\ 460s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 10 phmap0.ra phmap1.ra phmap2.ra phmap.ra ;\ 460s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -S8 -x64 c.ra ;\ 460s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac c.ra phmap.ra c2.ra ;\ 460s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -S --shared-img-dims=$(/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bitmask 10) -tt.ra k.ra c2.ra i.ra ;\ 460s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -s -t0.16 i.ra ref.ra ;\ 460s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 461s [ 1 128 13 8 1 1 1 1 1 1 3 1 1 1 1 1 ] 461s [ 64 64 1 8 1 1 1 1 1 1 3 1 1 1 1 1 ] 461s Regularization terms: 0, Supporting variables: 0 461s conjugate gradients 461s Total Time: 0.119106 461s Scaled by: 62.314728+0.001855i 461s 0.116592 461s touch tests/test-pics-phase 461s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 461s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x 64 -k -s 2 ksp_1.ra ;\ 461s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//poisson -Y 64 -y 2 -Z 64 -z 2 -C 32 -e tmp_poisson_1.ra ;\ 461s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//squeeze tmp_poisson_1.ra poisson_1.ra ;\ 461s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac ksp_1.ra poisson_1.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//ksp_usamp_1.ra ;\ 461s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 461s points: 1579, grid size: 64x64x(pi/4) = 3216 (R = 2.037360) 461s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 461s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -G -x 64 -k -s 2 ksp_2.ra ;\ 461s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//poisson -Y 64 -y 2 -Z 64 -z 2 -C 32 -e tmp_poisson_2.ra ;\ 461s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//squeeze tmp_poisson_2.ra poisson_2.ra ;\ 461s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac ksp_2.ra poisson_2.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//ksp_usamp_2.ra ;\ 461s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 461s points: 1579, grid size: 64x64x(pi/4) = 3216 (R = 2.037360) 461s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 461s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -B -x 64 -k -s 2 ksp_3.ra ;\ 461s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//poisson -Y 64 -y 2 -Z 64 -z 2 -C 32 -e tmp_poisson_3.ra ;\ 461s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//squeeze tmp_poisson_3.ra poisson_3.ra ;\ 461s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac ksp_3.ra poisson_3.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//ksp_usamp_3.ra ;\ 461s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 465s points: 1579, grid size: 64x64x(pi/4) = 3216 (R = 2.037360) 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ecalib -S /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//ksp_usamp_1.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//sens_1.ra 465s Done. 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -S -l2 -r 0.005 -i 3 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//ksp_usamp_1.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//sens_1.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//img_l2_1.ra 465s 2 maps. 465s ESPIRiT reconstruction. 465s Size: 4096 Samples: 1579 Acc: 2.59 465s l2 regularization: 0.005000 465s Regularization terms: 1, Supporting variables: 0 465s conjugate gradients 465s Total Time: 0.005400 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ecalib -S /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//ksp_usamp_2.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//sens_2.ra 465s Done. 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -S -l2 -r 0.005 -i 3 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//ksp_usamp_2.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//sens_2.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//img_l2_2.ra 465s 2 maps. 465s ESPIRiT reconstruction. 465s Size: 4096 Samples: 1579 Acc: 2.59 465s l2 regularization: 0.005000 465s Regularization terms: 1, Supporting variables: 0 465s conjugate gradients 465s Total Time: 0.004785 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ecalib -S /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//ksp_usamp_3.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//sens_3.ra 465s Done. 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pics -S -l2 -r 0.005 -i 3 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//ksp_usamp_3.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//sens_3.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//img_l2_3.ra 465s 2 maps. 465s ESPIRiT reconstruction. 465s Size: 4096 Samples: 1579 Acc: 2.59 465s l2 regularization: 0.005000 465s Regularization terms: 1, Supporting variables: 0 465s conjugate gradients 465s Total Time: 0.004468 465s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart join 13 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//img_l2_1.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//img_l2_2.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//img_l2_3.ra img_l2_ref ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart join 13 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//ksp_usamp_1.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//ksp_usamp_2.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//ksp_usamp_3.ra ksp_usamp_p ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart join 13 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//sens_1.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//sens_2.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//sens_3.ra sens_p ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart -l 8192 -e 3 pics -S -l2 -r 0.005 -i 3 ksp_usamp_p sens_p img_l2_p ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart nrmse -t 2e-5 img_l2_ref img_l2_p ;\ 465s rm *.cfl *.hdr ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 465s 2 maps. 465s ESPIRiT reconstruction. 465s Size: 4096 Samples: 1579 Acc: 2.59 465s l2 regularization: 0.005000 465s Regularization terms: 1, Supporting variables: 0 465s conjugate gradients 465s Total Time: 0.005314 465s 2 maps. 465s ESPIRiT reconstruction. 465s Size: 4096 Samples: 1579 Acc: 2.59 465s l2 regularization: 0.005000 465s Regularization terms: 1, Supporting variables: 0 465s conjugate gradients 465s Total Time: 0.003703 465s 2 maps. 465s ESPIRiT reconstruction. 465s Size: 4096 Samples: 1579 Acc: 2.59 465s l2 regularization: 0.005000 465s Regularization terms: 1, Supporting variables: 0 465s conjugate gradients 465s Total Time: 0.003329 465s 0.000000 465s touch tests/test-pics-cart-loop 465s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart join 13 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//img_l2_1.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//img_l2_2.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//img_l2_3.ra img_l2_ref_03 ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart join 13 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//img_l2_2.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//img_l2_3.ra img_l2_ref_13 ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart join 13 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//img_l2_3.ra img_l2_ref_23 ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart join 13 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//img_l2_1.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//img_l2_2.ra img_l2_ref_02 ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart join 13 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//img_l2_1.ra img_l2_ref_01 ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart join 13 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//ksp_usamp_1.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//ksp_usamp_2.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//ksp_usamp_3.ra ksp_usamp_p ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart join 13 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//sens_1.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//sens_2.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//sens_3.ra sens_p ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart -l 8192 -s 1 -e 3 pics -S -l2 -r 0.005 -i 3 ksp_usamp_p sens_p img_l2_p13 ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart nrmse -t 2e-5 img_l2_ref_13 img_l2_p13 ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart -l 8192 -s 0 -e 3 pics -S -l2 -r 0.005 -i 3 ksp_usamp_p sens_p img_l2_p03 ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart nrmse -t 2e-5 img_l2_ref_03 img_l2_p03 ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart -l 8192 -s 2 -e 3 pics -S -l2 -r 0.005 -i 3 ksp_usamp_p sens_p img_l2_p23 ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart nrmse -t 2e-5 img_l2_ref_23 img_l2_p23 ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart -l 8192 -s 0 -e 2 pics -S -l2 -r 0.005 -i 3 ksp_usamp_p sens_p img_l2_p02 ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart nrmse -t 2e-5 img_l2_ref_02 img_l2_p02 ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart -l 8192 -s 0 -e 1 pics -S -l2 -r 0.005 -i 3 ksp_usamp_p sens_p img_l2_p01 ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart nrmse -t 2e-5 img_l2_ref_01 img_l2_p01 ;\ 465s rm *.cfl ; rm *.hdr ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 465s 2 maps. 465s ESPIRiT reconstruction. 465s Size: 4096 Samples: 1579 Acc: 2.59 465s l2 regularization: 0.005000 465s Regularization terms: 1, Supporting variables: 0 465s conjugate gradients 465s Total Time: 0.005514 465s 2 maps. 465s ESPIRiT reconstruction. 465s Size: 4096 Samples: 1579 Acc: 2.59 465s l2 regularization: 0.005000 465s Regularization terms: 1, Supporting variables: 0 465s conjugate gradients 465s Total Time: 0.005645 465s 0.000000 465s 2 maps. 465s ESPIRiT reconstruction. 465s Size: 4096 Samples: 1579 Acc: 2.59 465s l2 regularization: 0.005000 465s Regularization terms: 1, Supporting variables: 0 465s conjugate gradients 465s Total Time: 0.009035 465s 2 maps. 465s ESPIRiT reconstruction. 465s Size: 4096 Samples: 1579 Acc: 2.59 465s l2 regularization: 0.005000 465s Regularization terms: 1, Supporting variables: 0 465s conjugate gradients 465s Total Time: 0.005462 465s 2 maps. 465s ESPIRiT reconstruction. 465s Size: 4096 Samples: 1579 Acc: 2.59 465s l2 regularization: 0.005000 465s Regularization terms: 1, Supporting variables: 0 465s conjugate gradients 465s Total Time: 0.003313 465s 0.000000 465s 2 maps. 465s ESPIRiT reconstruction. 465s Size: 4096 Samples: 1579 Acc: 2.59 465s l2 regularization: 0.005000 465s Regularization terms: 1, Supporting variables: 0 465s conjugate gradients 465s Total Time: 0.005418 465s 0.000000 465s 2 maps. 465s ESPIRiT reconstruction. 465s Size: 4096 Samples: 1579 Acc: 2.59 465s l2 regularization: 0.005000 465s Regularization terms: 1, Supporting variables: 0 465s conjugate gradients 465s Total Time: 0.004782 465s 2 maps. 465s ESPIRiT reconstruction. 465s Size: 4096 Samples: 1579 Acc: 2.59 465s l2 regularization: 0.005000 465s Regularization terms: 1, Supporting variables: 0 465s conjugate gradients 465s Total Time: 0.004079 465s 0.000000 465s 2 maps. 465s ESPIRiT reconstruction. 465s Size: 4096 Samples: 1579 Acc: 2.59 465s l2 regularization: 0.005000 465s Regularization terms: 1, Supporting variables: 0 465s conjugate gradients 465s Total Time: 0.006921 465s 0.000000 465s touch tests/test-pics-cart-loop_range 465s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart join 13 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//ksp_usamp_1.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//ksp_usamp_2.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//ksp_usamp_3.ra ksp_usamp_p ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart join 13 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//sens_1.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//sens_2.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//sens_3.ra sens_p ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart -l 8192 -s 0 pics -S -l2 -r 0.005 -i 3 ksp_usamp_p sens_p img_l2_0 ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart nrmse -t 2e-5 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//img_l2_1.ra img_l2_0 ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart -l 8192 -s 1 pics -S -l2 -r 0.005 -i 3 ksp_usamp_p sens_p img_l2_1 ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart nrmse -t 2e-5 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//img_l2_2.ra img_l2_1 ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart -l 8192 -s 2 pics -S -l2 -r 0.005 -i 3 ksp_usamp_p sens_p img_l2_2 ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//bart nrmse -t 2e-5 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//img_l2_3.ra img_l2_2 ;\ 465s rm *.cfl *.hdr ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 465s 2 maps. 465s ESPIRiT reconstruction. 465s Size: 4096 Samples: 1579 Acc: 2.59 465s l2 regularization: 0.005000 465s Regularization terms: 1, Supporting variables: 0 465s conjugate gradients 465s Total Time: 0.004674 465s 0.000000 465s 2 maps. 465s ESPIRiT reconstruction. 465s Size: 4096 Samples: 1579 Acc: 2.59 465s l2 regularization: 0.005000 465s Regularization terms: 1, Supporting variables: 0 465s conjugate gradients 465s Total Time: 0.007741 465s 0.000000 465s 2 maps. 465s ESPIRiT reconstruction. 465s Size: 4096 Samples: 1579 Acc: 2.59 465s l2 regularization: 0.005000 465s Regularization terms: 1, Supporting variables: 0 465s conjugate gradients 465s Total Time: 0.008293 465s 0.000000 465s touch tests/test-pics-cart-slice 465s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//normalize 8 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//coils.ra coilsnorm.ra ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -n 10 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra shepplogan_noise.ra ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pocsense -r0.0 shepplogan_noise.ra coilsnorm.ra reco.ra ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.05 reco.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ;\ 465s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 465s Reconstruction... 465s [Iter 0001] Objective: 0.000000, Error: -1.000000 465s [Iter 0002] Objective: 28.909819, Error: -1.000000 465s [Iter 0003] Objective: 28.909819, Error: -1.000000 465s [Iter 0004] Objective: 28.909819, Error: -1.000000 465s [Iter 0005] Objective: 28.909819, Error: -1.000000 465s [Iter 0006] Objective: 28.909819, Error: -1.000000 465s [Iter 0007] Objective: 28.909819, Error: -1.000000 465s [Iter 0008] Objective: 28.909819, Error: -1.000000 465s [Iter 0009] Objective: 28.909819, Error: -1.000000 465s [Iter 0010] Objective: 28.909819, Error: -1.000000 465s [Iter 0011] Objective: 28.909819, Error: -1.000000 465s [Iter 0012] Objective: 28.909819, Error: -1.000000 465s [Iter 0013] Objective: 28.909819, Error: -1.000000 465s [Iter 0014] Objective: 28.909819, Error: -1.000000 465s [Iter 0015] Objective: 28.909819, Error: -1.000000 465s [Iter 0016] Objective: 28.909819, Error: -1.000000 465s [Iter 0017] Objective: 28.909819, Error: -1.000000 465s [Iter 0018] Objective: 28.909819, Error: -1.000000 465s [Iter 0019] Objective: 28.909819, Error: -1.000000 465s [Iter 0020] Objective: 28.909819, Error: -1.000000 465s [Iter 0021] Objective: 28.909819, Error: -1.000000 465s [Iter 0022] Objective: 28.909819, Error: -1.000000 465s [Iter 0023] Objective: 28.909819, Error: -1.000000 465s [Iter 0024] Objective: 28.909819, Error: -1.000000 465s [Iter 0025] Objective: 28.909819, Error: -1.000000 465s [Iter 0026] Objective: 28.909819, Error: -1.000000 465s [Iter 0027] Objective: 28.909819, Error: -1.000000 465s [Iter 0028] Objective: 28.909819, Error: -1.000000 465s [Iter 0029] Objective: 28.909819, Error: -1.000000 465s [Iter 0030] Objective: 28.909819, Error: -1.000000 465s [Iter 0031] Objective: 28.909819, Error: -1.000000 465s [Iter 0032] Objective: 28.909819, Error: -1.000000 465s [Iter 0033] Objective: 28.909819, Error: -1.000000 465s [Iter 0034] Objective: 28.909819, Error: -1.000000 465s [Iter 0035] Objective: 28.909819, Error: -1.000000 465s [Iter 0036] Objective: 28.909819, Error: -1.000000 465s [Iter 0037] Objective: 28.909819, Error: -1.000000 465s [Iter 0038] Objective: 28.909819, Error: -1.000000 465s [Iter 0039] Objective: 28.909819, Error: -1.000000 465s [Iter 0040] Objective: 28.909819, Error: -1.000000 465s [Iter 0041] Objective: 28.909819, Error: -1.000000 465s [Iter 0042] Objective: 28.909819, Error: -1.000000 465s [Iter 0043] Objective: 28.909819, Error: -1.000000 465s [Iter 0044] Objective: 28.909819, Error: -1.000000 465s [Iter 0045] Objective: 28.909819, Error: -1.000000 465s [Iter 0046] Objective: 28.909819, Error: -1.000000 465s [Iter 0047] Objective: 28.909819, Error: -1.000000 465s [Iter 0048] Objective: 28.909819, Error: -1.000000 465s [Iter 0049] Objective: 28.909819, Error: -1.000000 465s [Iter 0050] Objective: 28.909819, Error: -1.000000 465s Done 465s Done. 465s 0.014795 465s touch tests/test-pocsense-pi 465s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//normalize 8 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//coils.ra coilsnorm.ra ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -n 10 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra shepplogan_noise.ra ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pocsense -r0.01 shepplogan_noise.ra coilsnorm.ra reco.ra ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.05 reco.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ;\ 465s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 465s Reconstruction... 465s [Iter 0001] Objective: 0.000000, Error: -1.000000 465s [Iter 0002] Objective: 28.623583, Error: -1.000000 465s [Iter 0003] Objective: 28.623583, Error: -1.000000 465s [Iter 0004] Objective: 28.623583, Error: -1.000000 465s [Iter 0005] Objective: 28.623583, Error: -1.000000 465s [Iter 0006] Objective: 28.623583, Error: -1.000000 465s [Iter 0007] Objective: 28.623583, Error: -1.000000 465s [Iter 0008] Objective: 28.623583, Error: -1.000000 465s [Iter 0009] Objective: 28.623583, Error: -1.000000 465s [Iter 0010] Objective: 28.623583, Error: -1.000000 465s [Iter 0011] Objective: 28.623583, Error: -1.000000 465s [Iter 0012] Objective: 28.623583, Error: -1.000000 465s [Iter 0013] Objective: 28.623583, Error: -1.000000 465s [Iter 0014] Objective: 28.623583, Error: -1.000000 465s [Iter 0015] Objective: 28.623583, Error: -1.000000 465s [Iter 0016] Objective: 28.623583, Error: -1.000000 465s [Iter 0017] Objective: 28.623583, Error: -1.000000 465s [Iter 0018] Objective: 28.623583, Error: -1.000000 465s [Iter 0019] Objective: 28.623583, Error: -1.000000 465s [Iter 0020] Objective: 28.623583, Error: -1.000000 465s [Iter 0021] Objective: 28.623583, Error: -1.000000 465s [Iter 0022] Objective: 28.623583, Error: -1.000000 465s [Iter 0023] Objective: 28.623583, Error: -1.000000 465s [Iter 0024] Objective: 28.623583, Error: -1.000000 465s [Iter 0025] Objective: 28.623583, Error: -1.000000 465s [Iter 0026] Objective: 28.623583, Error: -1.000000 465s [Iter 0027] Objective: 28.623583, Error: -1.000000 465s [Iter 0028] Objective: 28.623583, Error: -1.000000 465s [Iter 0029] Objective: 28.623583, Error: -1.000000 465s [Iter 0030] Objective: 28.623583, Error: -1.000000 465s [Iter 0031] Objective: 28.623583, Error: -1.000000 465s [Iter 0032] Objective: 28.623583, Error: -1.000000 465s [Iter 0033] Objective: 28.623583, Error: -1.000000 465s [Iter 0034] Objective: 28.623583, Error: -1.000000 465s [Iter 0035] Objective: 28.623583, Error: -1.000000 465s [Iter 0036] Objective: 28.623583, Error: -1.000000 465s [Iter 0037] Objective: 28.623583, Error: -1.000000 465s [Iter 0038] Objective: 28.623583, Error: -1.000000 465s [Iter 0039] Objective: 28.623583, Error: -1.000000 465s [Iter 0040] Objective: 28.623583, Error: -1.000000 465s [Iter 0041] Objective: 28.623583, Error: -1.000000 465s [Iter 0042] Objective: 28.623583, Error: -1.000000 465s [Iter 0043] Objective: 28.623583, Error: -1.000000 465s [Iter 0044] Objective: 28.623583, Error: -1.000000 465s [Iter 0045] Objective: 28.623583, Error: -1.000000 465s [Iter 0046] Objective: 28.623583, Error: -1.000000 465s [Iter 0047] Objective: 28.623583, Error: -1.000000 465s [Iter 0048] Objective: 28.623583, Error: -1.000000 465s [Iter 0049] Objective: 28.623583, Error: -1.000000 465s [Iter 0050] Objective: 28.623583, Error: -1.000000 465s Done 465s Done. 465s 0.017921 465s touch tests/test-pocsense-pi-reg 465s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//normalize 8 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//coils.ra coilsnorm.ra ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -n 10 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra shepplogan_noise.ra ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pocsense -l1 -r0.01 shepplogan_noise.ra coilsnorm.ra reco.ra ;\ 465s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.05 reco.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra ;\ 465s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 465s Reconstruction... 465s [Iter 0001] Objective: 0.000000, Error: -1.000000 465s [Iter 0002] Objective: 28.649082, Error: -1.000000 465s [Iter 0003] Objective: 28.649082, Error: -1.000000 465s [Iter 0004] Objective: 28.649082, Error: -1.000000 465s [Iter 0005] Objective: 28.649082, Error: -1.000000 465s [Iter 0006] Objective: 28.649082, Error: -1.000000 465s [Iter 0007] Objective: 28.649082, Error: -1.000000 465s [Iter 0008] Objective: 28.649082, Error: -1.000000 465s [Iter 0009] Objective: 28.649082, Error: -1.000000 465s [Iter 0010] Objective: 28.649082, Error: -1.000000 466s [Iter 0011] Objective: 28.649082, Error: -1.000000 466s [Iter 0012] Objective: 28.649082, Error: -1.000000 466s [Iter 0013] Objective: 28.649082, Error: -1.000000 466s [Iter 0014] Objective: 28.649082, Error: -1.000000 466s [Iter 0015] Objective: 28.649082, Error: -1.000000 466s [Iter 0016] Objective: 28.649082, Error: -1.000000 466s [Iter 0017] Objective: 28.649082, Error: -1.000000 466s [Iter 0018] Objective: 28.649082, Error: -1.000000 466s [Iter 0019] Objective: 28.649082, Error: -1.000000 466s [Iter 0020] Objective: 28.649082, Error: -1.000000 466s [Iter 0021] Objective: 28.649082, Error: -1.000000 466s [Iter 0022] Objective: 28.649082, Error: -1.000000 466s [Iter 0023] Objective: 28.649082, Error: -1.000000 466s [Iter 0024] Objective: 28.649082, Error: -1.000000 466s [Iter 0025] Objective: 28.649082, Error: -1.000000 466s [Iter 0026] Objective: 28.649082, Error: -1.000000 466s [Iter 0027] Objective: 28.649082, Error: -1.000000 466s [Iter 0028] Objective: 28.649082, Error: -1.000000 466s [Iter 0029] Objective: 28.649082, Error: -1.000000 466s [Iter 0030] Objective: 28.649082, Error: -1.000000 466s [Iter 0031] Objective: 28.649082, Error: -1.000000 466s [Iter 0032] Objective: 28.649082, Error: -1.000000 466s [Iter 0033] Objective: 28.649082, Error: -1.000000 466s [Iter 0034] Objective: 28.649082, Error: -1.000000 466s [Iter 0035] Objective: 28.649082, Error: -1.000000 466s [Iter 0036] Objective: 28.649082, Error: -1.000000 466s [Iter 0037] Objective: 28.649082, Error: -1.000000 466s [Iter 0038] Objective: 28.649082, Error: -1.000000 466s [Iter 0039] Objective: 28.649082, Error: -1.000000 466s [Iter 0040] Objective: 28.649082, Error: -1.000000 466s [Iter 0041] Objective: 28.649082, Error: -1.000000 466s [Iter 0042] Objective: 28.649082, Error: -1.000000 466s [Iter 0043] Objective: 28.649082, Error: -1.000000 466s [Iter 0044] Objective: 28.649082, Error: -1.000000 466s [Iter 0045] Objective: 28.649082, Error: -1.000000 466s [Iter 0046] Objective: 28.649082, Error: -1.000000 466s [Iter 0047] Objective: 28.649082, Error: -1.000000 466s [Iter 0048] Objective: 28.649082, Error: -1.000000 466s [Iter 0049] Objective: 28.649082, Error: -1.000000 466s [Iter 0050] Objective: 28.649082, Error: -1.000000 466s Done 466s Done. 466s 0.028680 466s touch tests/test-pocsense-pi-wl 466s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 466s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//index 1 6282 i0.ra ;\ 466s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.001 i0.ra i1.ra ;\ 466s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zexp -i i1.ra i2.ra ;\ 466s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//creal i2.ra i2r.ra ;\ 466s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- -1.i i2.ra ii2.ra ;\ 466s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//creal ii2.ra i2i.ra ;\ 466s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 1 6282 o.ra ;\ 466s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//saxpy 1. o.ra i2r.ra i3r.ra ;\ 466s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//saxpy 1. o.ra i2i.ra i3i.ra ;\ 466s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 i3r.ra i3i.ra i3.ra ;\ 466s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 50. i3.ra i4.ra ;\ 466s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pol2mask i4.ra i5.ra ;\ 466s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -c -x100 r.ra ;\ 466s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.05 r.ra i5.ra ;\ 466s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 467s 0.046557 467s touch tests/test-pol2mask 467s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//index 1 6 i1.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zexp -i i1.ra i2.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//creal i2.ra i2r.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- -1.i i2.ra ii2.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//creal ii2.ra i2i.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 1 6 o.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//saxpy 25. o.ra i2r.ra i3r.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//saxpy 25. o.ra i2i.ra i3i.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 0 i3r.ra i3i.ra i3.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//pol2mask -X50 -Y50 i3.ra i5.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 1 1 o.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 50 1 50 o.ra r.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. r.ra i5.ra ;\ 467s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 467s 0.000000 467s touch tests/test-pol2mask2 467s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 1 128 ones.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//poly 128 0 1 poly.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. ones.ra poly.ra ;\ 467s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 467s 0.000000 467s touch tests/test-poly 467s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom x.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//reshape 7 256 1 64 x.ra x2.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//repmat 1 5 x2.ra x3.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//reshape 5 128 128 x3.ra x4.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 1 2 x4.ra x5.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//reshape 7 128 128 1 x5.ra x6.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. x.ra x6.ra ;\ 467s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 467s 0.000000 467s touch tests/test-reshape 467s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s2 x.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 3 0 x.ra x0.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -n 1000000. x0.ra x0n.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rof 700. 3 x0n.ra xr.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.028 x0.ra xr.ra ;\ 467s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 467s 0.027661 467s touch tests/test-rof 467s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 3 100 100 3 z.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s1 -n1. z.ra n.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 50 50 1 oy.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 100 1 100 oy.ra oy2.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//roistat -b -D oy2.ra n.ra dy.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 50 1 50 n.ra ny2.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//std 3 ny2.ra dy2.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 dy2.ra dy.ra ;\ 467s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 467s 0.000000 467s touch tests/test-roistat-std 467s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 3 100 100 3 z.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s1 -n1. z.ra n.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 50 50 1 oy.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 100 1 100 oy.ra oy2.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//roistat -b -V oy2.ra n.ra dy.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 50 1 50 n.ra ny2.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//var 3 ny2.ra dy2.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 dy2.ra dy.ra ;\ 467s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 467s 0.000000 467s touch tests/test-roistat-var 467s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 3 100 100 3 z.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s1 -n1. z.ra n.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 50 50 1 oy.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 100 1 100 oy.ra oy2.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 70 70 1 ox.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 100 1 100 ox.ra ox2.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//roistat -b -D oy2.ra n.ra dy.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//roistat -b -D ox2.ra n.ra dx.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 4 dy.ra dx.ra d2.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 4 oy2.ra ox2.ra o2.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//roistat -b -D o2.ra n.ra d.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0000001 d2.ra d.ra ;\ 467s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 467s 0.000000 467s touch tests/test-roistat-mult 467s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 100 100 1 o.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//index 2 3 i.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac o.ra i.ra oi.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s1 -n0.1 oi.ra n.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 50 50 1 oy.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 100 1 100 oy.ra oy2.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//roistat -M oy2.ra n.ra dy.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.006 i.ra dy.ra ;\ 467s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 467s 0.003319 467s touch tests/test-roistat-mean 467s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x128 -y21 -t5 traj.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s8 -k -t traj2.ra ksp.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -a traj.ra ksp.ra I.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rtnlinv -N -S -i9 -t traj2.ra ksp.ra r.ra c.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 64 1 64 c.ra c2.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac r.ra c2.ra x.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft traj2.ra x.ra k2.ra ;\ 467s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.05 ksp.ra k2.ra ;\ 467s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 468s Est. image size: 128x128x1 468s Done. 474s Done. 474s 0.023063 474s touch tests/test-rtnlinv 474s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 474s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x128 -y21 -t5 traj.ra ;\ 474s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 474s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s8 -k -t traj2.ra ksp.ra ;\ 474s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 1 128 21 o.ra ;\ 474s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//repmat 10 5 o.ra o2.ra ;\ 474s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -a traj.ra o2.ra psf.ra ;\ 474s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -a traj.ra ksp.ra _adj.ra ;\ 474s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 2 _adj.ra adj.ra ;\ 474s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u 7 psf.ra mtf.ra ;\ 474s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u 7 adj.ra ksp2.ra ;\ 474s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 4. mtf.ra mtf2.ra ;\ 474s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rtnlinv -w1. -N -i9 -p mtf2.ra ksp2.ra r1.ra c1.ra ;\ 474s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rtnlinv -w1. -N -i9 -t traj2.ra ksp.ra r2.ra c2.ra ;\ 474s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 r2.ra r1.ra ;\ 474s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 c2.ra c1.ra ;\ 474s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 475s Est. image size: 128x128x1 475s Done. 475s Est. image size: 128x128x1 475s Done. 477s 0.000001 477s 0.000000 477s touch tests/test-rtnlinv-precomp 477s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 477s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -x128 -y21 traj.ra ;\ 477s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traj.ra traj2.ra ;\ 477s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s8 -k -t traj2.ra ksp.ra ;\ 477s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlinv -w1. -N -i9 -t traj2.ra ksp.ra r1.ra c1.ra ;\ 477s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rtnlinv -w1. -N -i9 -t traj2.ra ksp.ra r2.ra c2.ra ;\ 477s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 r2.ra r1.ra ;\ 477s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 c2.ra c1.ra ;\ 477s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 477s [ 0 0 0 ] 477s Scaling: 1.000000 478s 0.000000 478s 0.000000 478s touch tests/test-rtnlinv-nlinv-noncart 478s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 478s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s8 -k -x 128 ksp.ra ;\ 478s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 128 128 psf.ra ;\ 478s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nlinv -w1. -N -i9 -f1. -n ksp.ra r1.ra c1.ra ;\ 478s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rtnlinv -w1. -N -i9 -f1. -p psf.ra ksp.ra r2.ra c2.ra ;\ 478s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. r2.ra r1.ra ;\ 478s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. c2.ra c1.ra ;\ 478s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 479s Scaling: 1.000000 480s 0.000000 480s 0.000000 480s touch tests/test-rtnlinv-nlinv-pseudocart 480s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 480s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s1 -k ksp.ra ;\ 480s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 128 128 psf.ra ;\ 480s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rtnlinv -m4 -S -i1 -ppsf.ra ksp.ra r.ra c.ra ;\ 480s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rtnlinv -m4 -U -S -i1 -ppsf.ra ksp.ra rU.ra cU.ra ;\ 480s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rtnlinv -m4 -N -S -i1 -ppsf.ra ksp.ra rN.ra cN.ra ;\ 480s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rtnlinv -m4 -N -U -S -i1 -ppsf.ra ksp.ra rNU.ra cNU.ra ;\ 480s [ 1 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 r.ra` ] &&\ 480s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 c.ra` ] &&\ 480s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 rU.ra` ] &&\ 480s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 cU.ra` ] &&\ 480s [ 1 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 rN.ra` ] &&\ 480s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 cN.ra` ] &&\ 480s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 rNU.ra` ] &&\ 480s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 cNU.ra` ] &&\ 480s true 480s touch tests/test-rtnlinv-maps-dims 480s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 480s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -r -y21 traj.ra ;\ 480s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s1 -k -ttraj.ra ksp.ra ;\ 480s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rtnlinv -m4 -S -i1 -ttraj.ra ksp.ra r.ra c.ra ;\ 480s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rtnlinv -m4 -U -S -i1 -ttraj.ra ksp.ra rU.ra cU.ra ;\ 480s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rtnlinv -m4 -N -S -i1 -ttraj.ra ksp.ra rN.ra cN.ra ;\ 480s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rtnlinv -m4 -N -U -S -i1 -ttraj.ra ksp.ra rNU.ra cNU.ra ;\ 480s [ 1 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 r.ra` ] &&\ 480s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 c.ra` ] &&\ 480s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 rU.ra` ] &&\ 480s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 cU.ra` ] &&\ 480s [ 1 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 rN.ra` ] &&\ 480s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 cN.ra` ] &&\ 480s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 rNU.ra` ] &&\ 480s [ 4 -eq `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//show -d 4 cNU.ra` ] &&\ 480s true 481s touch tests/test-rtnlinv-noncart-maps-dims 481s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 481s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//signal -I -F -r0.0041 -e0.00258 -f8 -n1000 -1 3:3:1 -2 1:1:1 ref.ra ;\ 481s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//signal -I -F -r0.0041 -e0.00258 -f8 -n500 --av-spokes 2 -1 3:3:1 -2 1:1:1 signal.ra ;\ 481s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 0 ref.ra ref1.ra ;\ 481s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 1 ref.ra ref2.ra ;\ 481s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 5 ref1.ra ref2.ra comb.ra ;\ 481s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//avg 32 comb.ra avg.ra ;\ 481s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 0 signal.ra s.ra;\ 481s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 avg.ra s.ra ;\ 481s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 500 ref.ra ref1.ra ;\ 481s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 501 ref.ra ref2.ra ;\ 481s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 5 ref1.ra ref2.ra comb.ra ;\ 481s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//avg 32 comb.ra avg.ra ;\ 481s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 250 signal.ra s.ra;\ 481s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 avg.ra s.ra ;\ 481s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 998 ref.ra ref1.ra ;\ 481s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 999 ref.ra ref2.ra ;\ 481s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 5 ref1.ra ref2.ra comb.ra ;\ 481s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//avg 32 comb.ra avg.ra ;\ 481s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 499 signal.ra s.ra;\ 481s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 avg.ra s.ra ;\ 481s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 481s Spoke averaging: 2 482s 0.000000 482s 0.000000 482s 0.000000 482s touch tests/test-signal-spoke-averaging-2 482s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//signal -I -F -r0.0041 -e0.00258 -f8 -n999 -1 3:3:1 -2 1:1:1 ref.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//signal -I -F -r0.0041 -e0.00258 -f8 -n333 --av-spokes 3 -1 3:3:1 -2 1:1:1 signal.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 0 ref.ra ref1.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 1 ref.ra ref2.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 2 ref.ra ref3.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 5 ref1.ra ref2.ra ref3.ra comb.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//avg 32 comb.ra avg.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 0 signal.ra s.ra;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 avg.ra s.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 501 ref.ra ref1.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 502 ref.ra ref2.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 503 ref.ra ref3.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 5 ref1.ra ref2.ra ref3.ra comb.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//avg 32 comb.ra avg.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 167 signal.ra s.ra;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 avg.ra s.ra ;\ 482s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 482s Spoke averaging: 3 482s 0.000000 482s 0.000000 482s touch tests/test-signal-spoke-averaging-3 482s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//signal -S -i 0.5 -n 3 -e 0.01 -r 100 -1 3:3:1 -2 0.01:0.01:1 sig.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 1 1 one.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 0 sig.ra t0.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 t0.ra one.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 0.367879 one.ra ref1.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 1 sig.ra t1.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 t1.ra ref1.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 0.135335 one.ra ref2.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 2 sig.ra t2.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 t2.ra ref2.ra ;\ 482s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 482s 0.000000 482s 0.000001 482s 0.000002 482s touch tests/test-signal-se 482s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//signal -S -I -i 0.5 -n 3 -e 0.0001 -r 100 -1 3:3:1 -2 1000:1000:1 sig.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 1 1 one.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- -1 one.ra ref0.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 0 sig.ra t0.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 t0.ra ref0.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- -0.692963 one.ra ref1.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 1 sig.ra t1.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 t1.ra ref1.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- -0.4330626 one.ra ref2.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 2 sig.ra t2.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 t2.ra ref2.ra ;\ 482s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 482s 0.000000 482s 0.000001 482s 0.000000 482s touch tests/test-signal-ir-se 482s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//signal -S -i 0.5 -n 3 -e 0.01 -r 100 -1 3:3:1 -2 0.01:0.01:1 sig.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//signal -S -i 0.5 -n 1 -e 0.01 -r 100 -1 3:3:1 -2 0.01:0.01:1 sig2.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//signal -S -i 0.5 -n 1 -e 0.02 -r 100 -1 3:3:1 -2 0.01:0.01:1 sig3.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 1 sig.ra t1.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 t1.ra sig2.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 2 sig.ra t2.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 t2.ra sig3.ra ;\ 482s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 482s 0.000000 482s 0.000000 482s touch tests/test-signal-se-single 482s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//signal -S -I -i 0.5 -n 3 -e 0.0001 -r 100 -1 3:3:1 -2 1000:1000:1 sig.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//signal -S -I -i 0.5 -n 1 -e 0.0001 -r 100 -1 3:3:1 -2 1000:1000:1 sig2.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//signal -S -I -i 1 -n 1 -e 0.0001 -r 100 -1 3:3:1 -2 1000:1000:1 sig3.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 1 sig.ra t1.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 t1.ra sig2.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 2 sig.ra t2.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 t2.ra sig3.ra ;\ 482s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 482s 0.000000 482s 0.000000 482s touch tests/test-signal-ir-se-single 482s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq IR-FLASH,TR=0.0041,TE=0.0025,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0,FA=8,BWTP=4 -1 3:3:1 -2 1:1:1 _simu.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cabs _simu.ra _simu_abs.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//mip 32 _simu_abs.ra max.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//spow -- -1 max.ra scale.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac _simu.ra scale.ra _simu2.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- -1i _simu2.ra simu.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//signal -I -F -r0.0041 -e0.00258 -f8 -n1000 -1 3:3:1 -2 1:1:1 signal.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.003 simu.ra signal.ra ;\ 482s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 482s 0.000449 482s 0.002549 482s touch tests/test-sim-to-signal-irflash 482s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq FLASH,TR=0.0041,TE=0.0025,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0,FA=8,BWTP=4 -1 3:3:1 -2 1:1:1 _simu.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cabs _simu.ra _simu_abs.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//mip 32 _simu_abs.ra max.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//spow -- -1 max.ra scale.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac _simu.ra scale.ra _simu2.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- -1i _simu2.ra simu.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//signal -F -r0.0041 -e0.00258 -f8 -n1000 -1 3:3:1 -2 1:1:1 signal.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.003 simu.ra signal.ra ;\ 482s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 482s 0.000459 482s 0.002107 482s touch tests/test-sim-to-signal-flash 482s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 _sim.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- -1i _sim.ra sim.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//signal -I -B -r0.0045 -e0.00225 -f45 -n1000 -1 3:3:1 -2 1:1:1 signal.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.003 sim.ra signal.ra ;\ 482s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 482s 0.000520 482s 0.002074 482s touch tests/test-sim-to-signal-irbSSFP 482s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 ref.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0,FA=45,BWTP=4,av-spokes=3 -1 3:3:1 -2 1:1:1 signal.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 0 ref.ra ref1.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 1 ref.ra ref2.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 2 ref.ra ref3.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 5 ref1.ra ref2.ra ref3.ra comb.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//avg 32 comb.ra avg.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 0 signal.ra s.ra;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 avg.ra s.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 501 ref.ra ref1.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 502 ref.ra ref2.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 503 ref.ra ref3.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 5 ref1.ra ref2.ra ref3.ra comb.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//avg 32 comb.ra avg.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 5 167 signal.ra s.ra;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 avg.ra s.ra ;\ 482s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 482s 0.000515 482s 0.001296 482s 0.000000 482s 0.000000 482s touch tests/test-sim-spoke-averaging-3 482s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0,FA=45,BWTP=4,av-spokes=3 -1 3:3:1 -2 1:1:1 _sim.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- -1i _sim.ra sim.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//signal -I -B -r0.0045 -e0.00225 -f45 -n1000 -1 3:3:1 -2 1:1:1 --av-spokes 3 signal.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.001 sim.ra signal.ra ;\ 482s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 482s 0.001307 482s Spoke averaging: 3 482s 0.000844 482s touch tests/test-sim-to-signal-irbSSFP-averaged-spokes 482s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4,slice-thickness=0.020,sl-grad=0.01,Nspins=41 -1 3:3:1 -2 1:1:1 sim.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4,slice-thickness=0.020,sl-grad=0.01,Nspins=61 -1 3:3:1 -2 1:1:1 sim2.ra ;\ 482s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.01 sim.ra sim2.ra ;\ 482s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 484s 2.368694 488s 3.683845 488s 0.008262 488s touch tests/test-sim-slice-profile-spins 488s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 488s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4,slice-thickness=0.040,sl-grad=0.01,Nspins=41 -1 3:3:1 -2 1:1:1 sim.ra ;\ 488s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4,slice-thickness=0.020,sl-grad=0.01,Nspins=41 -1 3:3:1 -2 1:1:1 sim2.ra ;\ 488s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.02 sim.ra sim2.ra ;\ 488s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 492s 4.298083 495s 2.459184 495s 0.017259 495s touch tests/test-sim-slice-profile-slicethickness 495s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 495s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4,slice-thickness=0.040,sl-grad=0.01,Nspins=41 -1 3:3:1 -2 1:1:1 sim.ra ;\ 495s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4,slice-thickness=0.020,sl-grad=0.01,Nspins=31 -1 3:3:1 -2 1:1:1 sim2.ra ;\ 495s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.02 sim.ra sim2.ra ;\ 495s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 499s 4.511307 501s 1.895112 501s 0.018988 501s touch tests/test-sim-slice-profile-density 501s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 501s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4,slice-thickness=0.041,sl-grad=0,Nspins=41 -1 3:3:1 -2 1:1:1 sim.ra ;\ 501s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4,sl-grad=0 -1 3:3:1 -2 1:1:1 sim2.ra ;\ 501s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 41 sim2.ra sim3.ra ;\ 501s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.02 sim.ra sim3.ra ;\ 501s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 502s 0.983873 502s 0.024077 502s 0.000000 502s touch tests/test-sim-slice-profile-density2 502s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq IR-FLASH,TR=0.0041,TE=0.0025,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0.0001,FA=8,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq IR-FLASH,TR=0.0041,TE=0.0025,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0,FA=8,BWTP=4 -1 3:3:1 -2 1:1:1 simu_hp.ra ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0006 simu_hp.ra simu_ode.ra ;\ 502s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 502s 0.028090 502s 0.000422 502s 0.000311 502s touch tests/test-sim-ode-hp-irflash 502s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq FLASH,TR=0.0041,TE=0.0025,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0.0001,FA=8,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq FLASH,TR=0.0041,TE=0.0025,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0,FA=8,BWTP=4 -1 3:3:1 -2 1:1:1 simu_hp.ra ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0006 simu_hp.ra simu_ode.ra ;\ 502s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 502s 0.027098 502s 0.000424 502s 0.000368 502s touch tests/test-sim-ode-hp-flash 502s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0.0001,ppl=0,Trf=0,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_hp.ra ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00015 simu_hp.ra simu_ode.ra ;\ 502s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 502s 0.000516 502s 0.000660 502s 0.000000 502s touch tests/test-sim-ode-hp-irbssfp 502s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0.0001,ppl=0,Trf=0,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0,ppl=0,Trf=0,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_hp.ra ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00015 simu_hp.ra simu_ode.ra ;\ 502s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 502s 0.000497 502s 0.000504 502s 0.000000 502s touch tests/test-sim-ode-hp-bssfp 502s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,ipl=0.0001,ppl=0,Trf=0,FA=45,BWTP=4 -1 3:3:4 -2 1:1:5 simu.ra ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 6 0 7 0 simu.ra slice1.ra ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 6 3 7 4 simu.ra slice2.ra ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 slice1.ra slice2.ra ;\ 502s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 502s 0.008334 502s 0.000000 502s touch tests/test-sim-multi-relaxation 502s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ODE --seq BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0.01,ppl=0.00225,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --STM --seq BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0.01,ppl=0.00225,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_stm.ra ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.003 simu_stm.ra simu_ode.ra ;\ 502s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 502s 0.024980 502s 0.001521 502s 0.001837 502s touch tests/test-sim-ode-stm-bssfp 502s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ODE --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0.01,ppl=0.00225,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --STM --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=1000,pinv,ipl=0.01,ppl=0.00225,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_stm.ra ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.003 simu_stm.ra simu_ode.ra ;\ 502s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 502s 0.024276 502s 0.001509 502s 0.001527 502s touch tests/test-sim-ode-stm-irbssfp 502s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ODE --seq FLASH,TR=0.003,TE=0.0017,Nrep=1000,pinv,ipl=0.01,ppl=0,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --STM --seq FLASH,TR=0.003,TE=0.0017,Nrep=1000,pinv,ipl=0.01,ppl=0,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_stm.ra ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.001 simu_stm.ra simu_ode.ra ;\ 502s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 502s 0.017329 502s 0.001177 502s 0.000207 502s touch tests/test-sim-ode-stm-flash 502s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ODE --seq IR-FLASH,TR=0.003,TE=0.0017,Nrep=1000,pinv,ipl=0.01,ppl=0,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --STM --seq IR-FLASH,TR=0.003,TE=0.0017,Nrep=1000,pinv,ipl=0.01,ppl=0,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_stm.ra ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.001 simu_stm.ra simu_ode.ra ;\ 502s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 502s 0.015783 502s 0.001216 502s 0.000206 502s touch tests/test-sim-ode-stm-irflash 502s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ODE --seq BSSFP,TR=0.0045,TE=0.00225,Nrep=50,pinv,ipl=0.01,ppl=0.00225,Trf=0.0001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ROT --seq BSSFP,TR=0.0045,TE=0.00225,Nrep=50,pinv,ipl=0.01,ppl=0.00225,Trf=0.0001,FA=45,BWTP=4 --other sampling-rate=10E5 -1 3:3:1 -2 1:1:1 simu_rot.ra ;\ 502s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.003 simu_rot.ra simu_ode.ra ;\ 502s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 503s 0.001456 503s 0.000969 503s 0.000144 503s touch tests/test-sim-ode-rot-bssfp 503s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ODE --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=50,pinv,ipl=0.01,ppl=0.00225,Trf=0.0001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ROT --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=50,pinv,ipl=0.01,ppl=0.00225,Trf=0.0001,FA=45,BWTP=4 --other sampling-rate=10E5 -1 3:3:1 -2 1:1:1 simu_rot.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.003 simu_rot.ra simu_ode.ra ;\ 503s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 503s 0.001536 503s 0.000965 503s 0.000282 503s touch tests/test-sim-ode-rot-irbssfp 503s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ODE --seq FLASH,TR=0.003,TE=0.0017,Nrep=1000,pinv,ipl=0.01,ppl=0,Trf=0.001,FA=8,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ROT --seq FLASH,TR=0.003,TE=0.0017,Nrep=1000,pinv,ipl=0.01,ppl=0,Trf=0.001,FA=8,BWTP=4 --other sampling-rate=10E5 -1 3:3:1 -2 1:1:1 simu_rot.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.006 simu_rot.ra simu_ode.ra ;\ 503s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 503s 0.022119 503s 0.145081 503s 0.005577 503s touch tests/test-sim-ode-rot-flash 503s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ODE --seq IR-FLASH,TR=0.003,TE=0.0017,Nrep=1000,pinv,ipl=0.01,ppl=0,Trf=0.001,FA=8,BWTP=4 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ROT --seq IR-FLASH,TR=0.003,TE=0.0017,Nrep=1000,pinv,ipl=0.01,ppl=0,Trf=0.001,FA=8,BWTP=4 --other sampling-rate=10E5 -1 3:3:1 -2 1:1:1 simu_rot.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.01 simu_rot.ra simu_ode.ra ;\ 503s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 503s 0.021087 503s 0.145108 503s 0.009639 503s touch tests/test-sim-ode-rot-irflash 503s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=10,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 mxy.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=10,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4 --split-dim -1 3:3:1 -2 1:1:1 sim.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 0 0 sim.ra x.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 0 1 sim.ra y.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//saxpy -- 1i y.ra x.ra mxy2.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.002 mxy.ra mxy2.ra ;\ 503s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 503s 0.000298 503s 0.000320 503s 0.000000 503s touch tests/test-sim-split-dim-mag 503s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=10,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 mxy.ra dxy.ra;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --seq IR-BSSFP,TR=0.0045,TE=0.00225,Nrep=10,pinv,ipl=0,ppl=0.00225,Trf=0.001,FA=45,BWTP=4 --split-dim -1 3:3:1 -2 1:1:1 sim.ra deriv.ra;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 0 0 deriv.ra x.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 0 1 deriv.ra y.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//saxpy -- 1i y.ra x.ra d.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.002 dxy.ra d.ra ;\ 503s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 503s 0.000325 503s 0.000312 503s 0.000000 503s touch tests/test-sim-split-dim-deriv 503s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ODE --seq FLASH,TR=0.001,TE=0.001,Nrep=100,pinv,ipl=0,ppl=0,Trf=0.001,FA=180,BWTP=1,isp=0,slice-thickness=0.040,sl-grad=0.001 --split-dim -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --STM --seq FLASH,TR=0.001,TE=0.001,Nrep=100,pinv,ipl=0,ppl=0,Trf=0.001,FA=180,BWTP=1,isp=0,slice-thickness=0.040,sl-grad=0.001 --split-dim -1 3:3:1 -2 1:1:1 simu_stm.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.001 simu_stm.ra simu_ode.ra ;\ 503s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 503s 0.004812 503s 0.000915 503s 0.000217 503s touch tests/test-sim-ode-stm-flash-te-eq-trf-eq-tr 503s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ODE --seq BSSFP,TR=0.002,TE=0.001,Nrep=100,pinv,ipl=0,ppl=0.001,Trf=0.001,FA=45,BWTP=1,isp=0,slice-thickness=0.040,sl-grad=0.001 --split-dim -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --STM --seq BSSFP,TR=0.002,TE=0.001,Nrep=100,pinv,ipl=0,ppl=0.001,Trf=0.001,FA=45,BWTP=1,isp=0,slice-thickness=0.040,sl-grad=0.001 --split-dim -1 3:3:1 -2 1:1:1 simu_stm.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.001 simu_stm.ra simu_ode.ra ;\ 503s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 503s 0.004125 503s 0.001855 503s 0.000894 503s touch tests/test-sim-ode-stm-bssfp-te-eq-trf-eq-tr 503s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ODE --seq FLASH,TR=0.001,TE=0.001,Nrep=1,ipl=0,isp=0,ppl=0,Trf=0.001,FA=180,BWTP=1,slice-thickness=0.005,sl-grad=0.012 -1 3:3:1 -2 1:1:1 simu_ode.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ROT --seq FLASH,TR=0.001,TE=0.001,Nrep=1,ipl=0,isp=0,ppl=0,Trf=0.001,FA=180,BWTP=1,slice-thickness=0.005,sl-grad=0.012 --other sampling-rate=10E6 -1 3:3:1 -2 1:1:1 simu_rot.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.006 simu_rot.ra simu_ode.ra ;\ 503s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 503s 0.000057 503s 0.001513 503s 0.000515 503s touch tests/test-sim-ode-rot-flash-te-eq-trf-ep-tr 503s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ODE --seq IR-BSSFP,TR=0.004,TE=0.002,Nrep=1000,pinv,ipl=0.01,ppl=0.002,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 --other ode-tol=1E-6 s.ra d.ra;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 4 0 d.ra d_r1.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ODE --seq IR-BSSFP,TR=0.004,TE=0.002,Nrep=1000,pinv,ipl=0.01,ppl=0.002,Trf=0.001,FA=45,BWTP=4 -1 3.003:3.003:1 -2 1:1:1 --other ode-tol=1E-6 s2.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//saxpy -- -1 s.ra s2.ra diff.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 333 diff.ra g.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- -9 g.ra g2.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.018 d_r1.ra g2.ra ;\ 503s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 503s 0.036494 503s 0.036481 503s 0.014149 503s touch tests/test-sim-ode-deriv-r1 503s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ODE --seq IR-BSSFP,TR=0.004,TE=0.002,Nrep=1000,pinv,ipl=0.01,ppl=0.002,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 --other ode-tol=1E-6 s.ra d.ra;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 4 2 d.ra d_r2.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ODE --seq IR-BSSFP,TR=0.004,TE=0.002,Nrep=1000,pinv,ipl=0.01,ppl=0.002,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1.01:1.01:1 --other ode-tol=1E-6 s2.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//saxpy -- -1 s.ra s2.ra diff.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 100 diff.ra g.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- -1 g.ra g2.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.018 d_r2.ra g2.ra ;\ 503s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 503s 0.036067 503s 0.036380 503s 0.010647 503s touch tests/test-sim-ode-deriv-r2 503s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ODE --seq IR-BSSFP,TR=0.004,TE=0.002,Nrep=1000,pinv,ipl=0.01,ppl=0.002,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 --other ode-tol=1E-6 s.ra d.ra;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 4 3 d.ra d_b1.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ODE --seq IR-BSSFP,TR=0.004,TE=0.002,Nrep=1000,pinv,ipl=0.01,ppl=0.002,Trf=0.001,FA=45.1,BWTP=4 -1 3:3:1 -2 1:1:1 --other ode-tol=1E-6 s2.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//saxpy -- -1 s.ra s2.ra diff.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 10 diff.ra g.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 45 g.ra g2.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.01 d_b1.ra g2.ra ;\ 503s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 503s 0.036138 503s 0.036703 503s 0.005372 503s touch tests/test-sim-ode-deriv-b1 503s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ODE --seq IR-BSSFP,TR=0.004,TE=0.002,Nrep=1000,pinv,ipl=0.01,ppl=0.002,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1:1:1 --other ode-tol=1E-6 s.ra d.ra;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --STM --seq IR-BSSFP,TR=0.004,TE=0.002,Nrep=1000,pinv,ipl=0.01,ppl=0.002,Trf=0.001,FA=45,BWTP=4 -1 3:3:1 -2 1.01:1.01:1 --other ode-tol=1E-6 s2.ra d2.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.005 d.ra d2.ra ;\ 503s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 503s 0.036207 503s 0.001500 503s 0.002476 503s touch tests/test-sim-ode-stm-deriv 503s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ODE --seq IR-BSSFP,TR=0.004,TE=0.002,Nrep=300,ipl=0.01,ppl=0.002,Trf=0.001,FA=45,BWTP=4 --BMC --pool P=5,T1=3:3:3:3,T2=1e-2:1e-2:1e-2:1e-2,M0=0.3:0.3:0.3:0.3,k=20:20:20:20 -1 3:3:1 -2 0.1:0.1:1 s.ra d.ra;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 8 1 3 s.ra s2.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 8 3 5 s.ra s3.ra ;\ 503s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 1e-5 s2.ra s3.ra ;\ 503s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 504s 0.163169 504s 0.000000 504s touch tests/test-sim-bmc-signal 504s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 504s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ODE --seq IR-BSSFP,TR=0.004,TE=0.002,Nrep=300,ipl=0.01,ppl=0.002,Trf=0.001,FA=45,BWTP=4 --BMC --pool P=5,T1=3:3:3:3,T2=1e-5:1e-5:1e-5:1e-5,M0=0.3:0.3:0.3:0.3,k=10:10:10:10,Om=100:100:100:100 -1 3:3:1 -2 1:1:1 s.ra d.ra;\ 504s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 4 0 3 8 1 3 d.ra d1.ra ;\ 504s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 4 0 3 8 3 5 d.ra d2.ra ;\ 504s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 4 4 6 8 1 2 d.ra d3.ra ;\ 504s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 4 4 6 8 2 3 d.ra d4.ra ;\ 504s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 1e-5 d1.ra d2.ra ;\ 504s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 1e-5 d3.ra d4.ra ;\ 504s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 505s 1.521080 505s 0.000001 505s 0.000001 505s touch tests/test-sim-bmc-deriv 505s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ODE --seq IR-BSSFP,TR=0.004,TE=0.002,Nrep=500,ipl=0.01,isp=0.005,ppl=0.002,Trf=0.001,FA=45,BWTP=4 --BMC --pool P=2,T1=3:3:3:3,T2=1e-4:1e-4:1e-4:1e-4,M0=0.3:0.3:0.3:0.3,k=10:10:10:10,Om=100:100:100:100 -1 3:3:1 -2 0.1:0.1:1 s_ode.ra d_ode.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --STM --seq IR-BSSFP,TR=0.004,TE=0.002,Nrep=500,ipl=0.01,isp=0.005,ppl=0.002,Trf=0.001,FA=45,BWTP=4 --BMC --pool P=2,T1=3:3:3:3,T2=1e-4:1e-4:1e-4:1e-4,M0=0.3:0.3:0.3:0.3,k=10:10:10:10,Om=100:100:100:100 -1 3:3:1 -2 0.1:0.1:1 s_stm.ra d_stm.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 1e-3 s_ode.ra s_stm.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.004 d_ode.ra d_stm.ra ;\ 505s 505s 0.045134 505s 0.112869 505s 0.000656 505s 0.001712 505s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ODE --seq IR-BSSFP,TR=0.004,TE=0.002,Nrep=500,ipl=0.01,isp=0.005,ppl=0.002,Trf=0.001,FA=45,BWTP=4 --BMC --pool P=2,T1=1:1:1:1,T2=0.1:0.1:0.1:0.1,M0=1:1:1:1,k=0:0:0:0 -1 1:1:1 -2 0.1:0.1:1 --other ode-tol=0.5e-5 s_bmc.ra d_bmc.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//sim --ODE --seq IR-BSSFP,TR=0.004,TE=0.002,Nrep=500,ipl=0.01,isp=0.005,ppl=0.002,Trf=0.001,FA=45,BWTP=4 --other ode-tol=0.5e-5 -1 1:1:1 -2 0.1:0.1:1 s.ra d.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 4 0 4 8 0 1 d_bmc.ra d_bmc2.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 8 0 s_bmc.ra s_bmc2.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0006 d.ra d_bmc2.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0003 s.ra s_bmc2.ra ;\ 505s 505s 0.044120 505s 0.012269 505s 0.000389 505s 0.000151 505s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 1 1 o.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 100 1 100 o.ra o0.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 1 50 o0.ra o1.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 0 50 o1.ra o2.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. o2.ra o.ra ;\ 505s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 505s 0.000000 505s touch tests/test-slice 505s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 1 1 1 o.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 100 1 100 2 100 o.ra o0.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 0 50 1 50 2 50 o0.ra o1.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. o1.ra o.ra ;\ 505s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 505s 0.000000 505s touch tests/test-slice-multidim 505s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 6 1 2 1 3 1 4 a0.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 2 3 4 b0.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise a0.ra a1.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise b0.ra b1.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//squeeze a1.ra a2.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. b1.ra a2.ra ;\ 505s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 505s 0.000000 505s touch tests/test-squeeze 505s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -x128 -y50 -G -D t.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t t.ra -s8 k.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 1 1 k.ra k1.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//squeeze k1.ra kx.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//svd kx.ra u.ra s.ra vh.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ssa -w1 -m0 -n0 kx.ra eof.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cabs u.ra uabs.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cabs eof.ra eofabs.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize 1 4 uabs.ra utest.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize 1 4 eofabs.ra eoftest.ra ;\ 505s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.00001 utest.ra eoftest.ra ;\ 505s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 506s Performing SSA-FARY 506s 0.000004 506s touch tests/test-ssa-pca 506s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 506s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -x128 -y50 -G -D t.ra ;\ 506s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -t t.ra -s8 k.ra ;\ 506s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 1 1 k.ra k1.ra ;\ 506s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//squeeze k1.ra kx.ra ;\ 506s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 59 kx.ra kx1.ra ;\ 506s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//casorati 0 10 1 8 kx1.ra kcas.ra ;\ 506s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//svd kcas.ra u.ra s.ra vh.ra ;\ 506s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ssa -w10 -m0 -n0 kx.ra eof.ra ;\ 506s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cabs u.ra uabs.ra ;\ 506s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cabs eof.ra eofabs.ra ;\ 506s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize 1 10 uabs.ra utest.ra ;\ 506s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize 1 10 eofabs.ra eoftest.ra ;\ 506s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000015 utest.ra eoftest.ra ;\ 506s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 507s Performing SSA-FARY 507s 0.000011 507s touch tests/test-ssa 507s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 507s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -m -x12 -s8 ph.ra ;\ 507s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//reshape 11 1 1 1152 ph.ra phc.ra ;\ 507s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//repmat 11 5 phc.ra phc1.ra ;\ 507s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//reshape 3072 160 1 phc1.ra phc2.ra ;\ 507s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//squeeze phc2.ra phc10.ra ;\ 507s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//transpose 0 1 phc10.ra phc3.ra ;\ 507s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -n1e8 phc3.ra ph_noise.ra ;\ 507s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ssa -w33 -m0 -z -n0 phc3.ra eof.ra ;\ 507s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ssa -w33 -m0 -z -n0 -r10 ph_noise.ra eof2.ra s.ra back.ra ;\ 507s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.4 phc3.ra back.ra ;\ 507s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ssa -w33 -m0 -z -n0 -r5 phc3.ra eof3.ra tmp.ra tmp1.ra ;\ 507s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ssa -w33 -m0 -z -n0 -r5 tmp1.ra eof4.ra ;\ 507s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 1 0 4 eof3.ra eofex.ra ;\ 507s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cabs eofex.ra eofex1.ra ;\ 507s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//extract 1 0 4 eof4.ra eof4ex.ra ;\ 507s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//cabs eof4ex.ra eof4ex1.ra ;\ 507s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.05 eofex1.ra eof4ex1.ra ;\ 507s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 507s Performing SSA-FARY 508s Performing SSA 510s 0.385882 510s Performing SSA 513s Performing SSA-FARY 514s 0.010206 514s touch tests/test-ssa-backprojection 514s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 514s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -s2 x.ra ;\ 514s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 3 0 x.ra x0.ra ;\ 514s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -n 1000000. x0.ra x0n.ra ;\ 514s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//tgv 650. 3 x0n.ra xd.ra ;\ 514s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 15 0 xd.ra xd0.ra ;\ 514s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.024 x0.ra xd0.ra ;\ 514s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 514s 0.023596 514s touch tests/test-tgv 514s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 514s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x32 -3 -s2 --coil HEAD_2D_8CH x.ra ;\ 514s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 3 0 x.ra x0.ra ;\ 514s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -n 1000000. x0.ra x0n.ra ;\ 514s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//tgv 650. 7 x0n.ra xd.ra ;\ 514s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 15 0 xd.ra xd0.ra ;\ 514s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.02 x0.ra xd0.ra ;\ 514s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 514s WARN: A 3D simulation with 2D sensitivities is chosen! 516s 0.019533 516s touch tests/test-tgv-3D 516s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -x128 -y71 -r traja.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -x64 -y71 -o2. -r trajb.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 0.5 traja.ra traja2.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0000001 traja2.ra trajb.ra ;\ 516s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 516s 0.000000 516s touch tests/test-traj-over 516s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -x128 -y71 -r -c traja.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -x128 -y71 -q-0.5:-0.5:0. -r trajb.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0000001 traja.ra trajb.ra ;\ 516s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 516s 0.000000 516s touch tests/test-traj-dccen 516s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -x64 -y71 -r -c -o2. traja.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -x64 -y71 -q-0.5:-0.5:0. -r -o2. trajb.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0000001 traja.ra trajb.ra ;\ 516s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 516s 0.000000 516s touch tests/test-traj-dccen-over 516s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -x128 -y128 -r traja.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//poly 128 1 0 0.0245436926 angle.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -x128 -y128 -r -C angle.ra trajb.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 traja.ra trajb.ra ;\ 516s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 516s Custom-angle file is used. 516s 0.000000 516s touch tests/test-traj-custom 516s set -e ; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -R0. -r -y360 -D t0.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -k -t t0.ra k0.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -R30. -r -y360 -D t30.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -k -t t30.ra k30.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//vec 30. real_shift.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//vec `/tmp/autopkgtest.R1QNlS/autopkgtest_tmp//estshift 4 k0.ra k30.ra | grep -Eo "[0-9.]+$"` shift.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t1e-6 real_shift.ra shift.ra ;\ 516s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 516s 0.000000 516s touch tests/test-traj-rot 516s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -3 -x128 -y128 -r traj.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 1 1 128 o.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 63.5 o.ra a.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 1 0 traj.ra t.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//rss 1 t.ra b.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0000001 b.ra a.ra ;\ 516s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 516s 0.000000 516s touch tests/test-traj-3D 516s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -y 233 -r -A -s 1 --double-base -t 2 traj.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 10 0 traj.ra o1.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 10 1 traj.ra o2.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.007 o1.ra o2.ra ;\ 516s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 516s Golden Ratio Index is set to: 1 516s 0.000039 516s touch tests/test-traj-rational-approx-loop 516s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -y 233 -r -A -s 1 --double-base t.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -y 233 -r -D t2.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 1 128 233 o.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -a -x128:128:1 t.ra o.ra psf.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft 7 psf.ra pattern.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -a -x128:128:1 t2.ra o.ra psf2.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft 7 psf2.ra pattern2.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0005 pattern.ra pattern2.ra ;\ 516s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 516s Golden Ratio Index is set to: 1 516s Done. 516s Done. 516s 0.000387 516s touch tests/test-traj-rational-approx-pattern 516s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -y 466 -r -A -s 1 t.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -y 466 -r -D t2.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 3 1 128 466 o.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -a -x128:128:1 t.ra o.ra psf.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft 7 psf.ra pattern.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -a -x128:128:1 t2.ra o.ra psf2.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft 7 psf2.ra pattern2.ra ;\ 516s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0005 pattern.ra pattern2.ra ;\ 516s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 516s Golden Ratio Index is set to: 1 517s Done. 517s Done. 517s 0.000246 517s touch tests/test-traj-rational-approx-pattern2 517s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -y 2 -r -G -s1 --double-base traj.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -y 3 -r -G -s1 traj2.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 2 1 traj.ra o1.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 2 2 traj2.ra o2.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.007 o1.ra o2.ra ;\ 517s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 517s 0.000000 517s touch tests/test-traj-double-base 517s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -y 754 -r -A -s 1 -t3 t1.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -y 754 -r -A --raga-inc 233 -t3 t2.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.007 t1.ra t2.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -y 377 -r -A -s 1 --double-base -t3 t3.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -y 377 -r -A --raga-inc 233 --double-base -t3 t4.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.007 t3.ra t4.ra ;\ 517s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 517s Golden Ratio Index is set to: 1 517s Golden Ratio Index is set to: 1 517s 0.000000 517s Golden Ratio Index is set to: 1 517s Golden Ratio Index is set to: 1 517s 0.000000 517s touch tests/test-traj-rational-approx-inc 517s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//traj -y16 -x16 -a2 t.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -k -t t.ra k.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nufft -a -t t.ra k.ra x.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//upat -Y16 -Z16 -z2 u.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//squeeze u.ra u2.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//phantom -x16 -k k2.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac k2.ra u2.ra ku.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u -i 7 ku.ra x2.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.06 x.ra x2.ra ;\ 517s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 517s Est. image size: 16x16x1 517s Done. 517s 0.053981 517s touch tests/test-upat-traj 517s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 1 2 o.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//vec 1. 1.0+0.0i v.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. o.ra v.ra ;\ 517s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 517s 0.000000 517s touch tests/test-vec 517s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 1 2 o1.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale 1.i o1.ra o.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//vec 1.i 0.0+1.0i v.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. o.ra v.ra ;\ 517s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 517s 0.000000 517s touch tests/test-vec-imag 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//version -t `cat /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//version.txt` 517s touch tests/test-version 517s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//wavepsf -x 640 -y 128 wave_psf.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -iu 7 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra img.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 640 img.ra wave_zpad.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u 1 wave_zpad.ra wave_hyb.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac wave_hyb.ra wave_psf.ra wave_acq.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u 6 wave_acq.ra wave_ksp.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//wave /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//coils.ra wave_psf.ra wave_ksp.ra reco.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.23 -s reco.ra /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra ;\ 517s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 517s Loading data... Done. 517s FFTMOD maps and kspc... Done. 517s Estimating sampling mask... Done. 517s Creating linear operators: 517s E: 0.000570 seconds. 517s R: 0.000003 seconds. 517s Fx: 0.001014 seconds. 517s W: 0.000405 seconds. 517s Fyz: 0.000791 seconds. 517s M: 0.000326 seconds. 517s Forward linear operator information: 517s Domain: [128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 ] 517s Codomain: [640 128 1 8 1 1 1 1 1 1 1 1 1 1 1 1 ] 517s Max eval: 2.73e+15 517s Normalizing kspace... Done. 517s Using CG. 517s Maximum iterations: 300 517s Tolerance: 1.00e-03 517s Reconstruction... Done. 517s Reconstruction time: 0.128438 seconds. 517s Cleaning up and saving result... Done. 517s Total time: 0.543761 seconds. 517s Scaled by: 1349276032.000000-12332.097656i 517s 0.223089 517s touch tests/test-wave 517s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//wavelet 3 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra w.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//wavelet -a 3 128 128 w.ra a.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra a.ra ;\ 517s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 517s 0.000000 517s touch tests/test-wavelet 517s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 1 1 one.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 2 100 one.ra one2.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//circshift 2 1 one2.ra one3.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft 4 one3.ra ph.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra ph.ra ph2.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//wavelet 3 ph2.ra w.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//wavelet -a 3 128 128 w.ra a.ra ;\ 517s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 ph2.ra a.ra ;\ 517s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 518s 0.000000 518s touch tests/test-wavelet-batch 518s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 1 1 one.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 2 100 one.ra one2.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//circshift 2 1 one2.ra one3.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft 4 one3.ra ph.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra ph.ra ph2.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//wavelet 3 ph2.ra w.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 2 80 w.ra w1.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//slice 2 80 ph2.ra ph1.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//wavelet 3 ph1.ra a.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. w1.ra a.ra ;\ 518s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 518s 0.000000 518s touch tests/test-wavelet-batch1 518s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 1 1 one.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 2 100 one.ra one2.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//circshift 2 1 one2.ra one3.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft 4 one3.ra ph.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra ph.ra ph2.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//transpose 0 2 ph2.ra ph3.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//wavelet 6 ph3.ra w.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//wavelet -a 6 128 128 w.ra a.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 ph3.ra a.ra ;\ 518s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 518s 0.000000 518s touch tests/test-wavelet-batch2 518s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 1 1 one.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 2 100 one.ra one2.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//circshift 2 1 one2.ra one3.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft 4 one3.ra ph.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra ph.ra ph2.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//transpose 1 2 ph2.ra ph3.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//wavelet 5 ph3.ra w.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//wavelet -a 5 128 128 w.ra a.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 ph3.ra a.ra ;\ 518s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 518s 0.000000 518s touch tests/test-wavelet-batch3 518s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 1 1 one.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 2 5 3 5 4 5 one.ra one2.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//circshift 2 1 one2.ra one3.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft 28 one3.ra ph.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra ph.ra ph2.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//transpose 0 3 ph2.ra ph3.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//wavelet 10 ph3.ra w.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//wavelet -a 10 128 128 w.ra a.ra ;\ 518s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 ph3.ra a.ra ;\ 518s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 519s 0.000000 519s touch tests/test-wavelet-batch4 519s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//wavelet -H 3 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra w.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//wavelet -H -a 3 128 128 w.ra a.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra a.ra ;\ 519s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 519s 0.000000 519s touch tests/test-wavelet-haar 519s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//wavelet -C 3 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra w.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//wavelet -C -a 3 128 128 w.ra a.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra a.ra ;\ 519s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 519s 0.000000 519s touch tests/test-wavelet-cdf44 519s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 1 4096 z.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s 1 -n 1 z.ra n1.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s 2 -n 2 z.ra n2.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s 3 -n 3 z.ra n3.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 3 n1.ra n2.ra n3.ra n.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 1 4096 o.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s 1 -n 1 o.ra s1.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s 2 -n 2 o.ra s2.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s 3 -n 3 o.ra s3.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 3 s1.ra s2.ra s3.ra s.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//whiten s.ra n.ra w.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//std 7 w.ra d.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 4 1 1 1 3 o.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.0002 d.ra o.ra ;\ 519s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 519s 0.000040 519s touch tests/test-whiten 519s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//wavepsf -x 640 -y 128 wave_psf.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -iu 7 /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan_coil_ksp.ra img.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//resize -c 0 640 img.ra wave_zpad.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u 1 wave_zpad.ra wave_hyb.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac wave_hyb.ra wave_psf.ra wave_acq.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fft -u 6 wave_acq.ra wave_ksp.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//transpose 1 3 wave_ksp.ra permuted.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//squeeze permuted.ra table.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//poly 128 1 0 1 ky.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//poly 128 1 0 0 kz.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//poly 128 1 0 0 te.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//join 1 ky.ra kz.ra te.ra reorder.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//poly 1 0 1 phi.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//wshfl /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//coils.ra wave_psf.ra phi.ra reorder.ra table.ra reco.ra ;\ 519s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.23 -s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/out//shepplogan.ra reco.ra ;\ 519s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 519s Loading data... Done. 519s Constructing sampling mask from reorder table... Done. 519s Constructing sampling-temporal kernel... Done. 519s Creating single channel linear operators: 519s R: 0.000010 seconds. 519s Fx: 0.000864 seconds. 519s W: 0.000367 seconds. 519s Fyz: 0.000332 seconds. 519s K: 0.000001 seconds. 519s Single channel forward operator information: 519s Domain: [ 128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1] 519s Codomain: [ 640 1 128 1 1 1 1 1 1 1 1 1 1 1 1 1] 519s Overall forward linear operator information: 519s Domain: [ 128 128 1 1 1 1 1 1 1 1 1 1 1 1 1 1] 519s Codomain: [ 640 8 128 1 1 1 1 1 1 1 1 1 1 1 1 1] 519s Normalizing data table and applying fftmod to table and maps... Done. 519s Preparing reconstruction operator: Algorithm: ADMM 519s . Rho: 1.00e+00 519s .ADMM 520s Reconstruction... Done. 520s Reconstruction time: 0.720761 seconds. 520s Cleaning up and saving result... Done. 520s Total time: 0.737519 seconds. 520s Scaled by: 0.000026+0.000000i 520s 0.223099 520s touch tests/test-wshfl 520s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 520s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 2 5 5 a.ra ;\ 520s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zexp a.ra b.ra ;\ 520s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//ones 2 5 5 c.ra ;\ 520s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0. c.ra b.ra ;\ 520s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 520s 0.000000 520s touch tests/test-zexp 520s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 520s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 2 5 5 a.ra ;\ 520s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s1 a.ra a1.ra ;\ 520s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s2 a.ra a2.ra ;\ 520s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//saxpy 1. a1.ra a2.ra as.ra ;\ 520s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zexp a1.ra b1.ra ;\ 520s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zexp a2.ra b2.ra ;\ 520s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zexp as.ra bs.ra ;\ 520s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//fmac b1.ra b2.ra bs2.ra ;\ 520s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 bs.ra bs2.ra ;\ 520s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 520s 0.000000 520s touch tests/test-zexp2 520s set -e; mkdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ; cd /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ ;\ 520s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zeros 2 5 5 a.ra ;\ 520s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//noise -s1 a.ra a1.ra ;\ 520s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//scale -- 1.i a1.ra a2.ra ;\ 520s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zexp a2.ra b1.ra ;\ 520s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//zexp -i a1.ra b2.ra ;\ 520s /tmp/autopkgtest.R1QNlS/autopkgtest_tmp//nrmse -t 0.000001 b1.ra b2.ra ;\ 520s rm *.ra ; cd .. ; rmdir /tmp/autopkgtest.R1QNlS/autopkgtest_tmp/tests/tmp/$$/ 520s 0.000000 520s touch tests/test-zexp-imag 520s autopkgtest [21:59:27]: test suite: -----------------------] 521s suite PASS 521s autopkgtest [21:59:28]: test suite: - - - - - - - - - - results - - - - - - - - - - 521s autopkgtest [21:59:28]: @@@@@@@@@@@@@@@@@@@@ summary 521s suite SKIP Test lists explicitly supported architectures, but the current architecture amd64 isn't listed. 521s suite SKIP Test lists explicitly supported architectures, but the current architecture amd64 isn't listed. 521s command1 PASS (superficial) 521s octave-integration FAIL badpkg 521s blame: bart 521s badpkg: Test dependencies are unsatisfiable. A common reason is that your testbed is out of date with respect to the archive, and you need to use a current testbed or run apt-get update or use -U. 521s commands PASS (superficial) 521s suite PASS 532s nova [W] Skipping flock for amd64 532s Creating nova instance adt-plucky-amd64-bart-20241201-215047-juju-7f2275-prod-proposed-migration-environment-15-c755f5f8-b64c-4914-bbe6-1d079db23a4d from image adt/ubuntu-plucky-amd64-server-20241201.img (UUID deff0ed4-7b64-4028-815f-ab405d6fd48b)... 532s nova [W] Skipping flock for amd64 532s Creating nova instance adt-plucky-amd64-bart-20241201-215047-juju-7f2275-prod-proposed-migration-environment-15-c755f5f8-b64c-4914-bbe6-1d079db23a4d from image adt/ubuntu-plucky-amd64-server-20241201.img (UUID deff0ed4-7b64-4028-815f-ab405d6fd48b)... 532s nova [W] Skipping flock for amd64 532s Creating nova instance adt-plucky-amd64-bart-20241201-215047-juju-7f2275-prod-proposed-migration-environment-15-c755f5f8-b64c-4914-bbe6-1d079db23a4d from image adt/ubuntu-plucky-amd64-server-20241201.img (UUID deff0ed4-7b64-4028-815f-ab405d6fd48b)...