0s autopkgtest [16:08:43]: starting date and time: 2024-07-26 16:08:43+0000
  0s autopkgtest [16:08:43]: git checkout: fd3bed09 nova: allow more retries for quota issues
  0s autopkgtest [16:08:43]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.l0a8dv7_/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-gbm --apt-upgrade r-cran-gbm --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-gbm/2.1.9-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos01-s390x-21.secgroup --name adt-oracular-s390x-r-cran-gbm-20240726-160843-juju-7f2275-prod-proposed-migration-environment-3-6bea9fc7-21b9-443d-aa6f-8634215da552 --image adt/ubuntu-oracular-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://us.ports.ubuntu.com/ubuntu-ports/
 80s autopkgtest [16:10:03]: testbed dpkg architecture: s390x
 81s autopkgtest [16:10:04]: testbed apt version: 2.9.6
 81s autopkgtest [16:10:04]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 82s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [126 kB]
 82s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [4288 B]
 82s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [50.6 kB]
 82s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [436 kB]
 82s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [8548 B]
 82s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main s390x Packages [66.8 kB]
 82s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main s390x c-n-f Metadata [2112 B]
 82s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/restricted s390x Packages [1368 B]
 82s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/restricted s390x c-n-f Metadata [120 B]
 82s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/universe s390x Packages [397 kB]
 82s Get:11 http://ftpmaster.internal/ubuntu oracular-proposed/universe s390x c-n-f Metadata [8372 B]
 82s Get:12 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse s390x Packages [2072 B]
 82s Get:13 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse s390x c-n-f Metadata [120 B]
 83s Fetched 1104 kB in 1s (1313 kB/s)
 83s Reading package lists...
 85s Reading package lists...
 85s Building dependency tree...
 85s Reading state information...
 85s Calculating upgrade...
 86s The following packages will be upgraded:
 86s   bpfcc-tools bpftrace libbpfcc liblz4-1 mawk python3-bpfcc
 86s 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 86s Need to get 17.4 MB of archives.
 86s After this operation, 58.9 MB of additional disk space will be used.
 86s Get:1 http://ftpmaster.internal/ubuntu oracular/main s390x liblz4-1 s390x 1.9.4-3 [75.5 kB]
 86s Get:2 http://ftpmaster.internal/ubuntu oracular/main s390x mawk s390x 1.3.4.20240622-2 [132 kB]
 86s Get:3 http://ftpmaster.internal/ubuntu oracular/main s390x libbpfcc s390x 0.30.0+ds-1ubuntu2 [677 kB]
 86s Get:4 http://ftpmaster.internal/ubuntu oracular/main s390x python3-bpfcc all 0.30.0+ds-1ubuntu2 [40.3 kB]
 86s Get:5 http://ftpmaster.internal/ubuntu oracular/main s390x bpfcc-tools all 0.30.0+ds-1ubuntu2 [697 kB]
 86s Get:6 http://ftpmaster.internal/ubuntu oracular/main s390x bpftrace s390x 0.21.0-1ubuntu6 [15.8 MB]
 87s Fetched 17.4 MB in 1s (13.1 MB/s)
 87s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 54767 files and directories currently installed.)
 87s Preparing to unpack .../liblz4-1_1.9.4-3_s390x.deb ...
 87s Unpacking liblz4-1:s390x (1.9.4-3) over (1.9.4-2) ...
 87s Setting up liblz4-1:s390x (1.9.4-3) ...
 87s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 54767 files and directories currently installed.)
 87s Preparing to unpack .../mawk_1.3.4.20240622-2_s390x.deb ...
 87s Unpacking mawk (1.3.4.20240622-2) over (1.3.4.20240622-1) ...
 87s Preparing to unpack .../libbpfcc_0.30.0+ds-1ubuntu2_s390x.deb ...
 87s Unpacking libbpfcc:s390x (0.30.0+ds-1ubuntu2) over (0.29.1+ds-1ubuntu7) ...
 88s Preparing to unpack .../python3-bpfcc_0.30.0+ds-1ubuntu2_all.deb ...
 88s Unpacking python3-bpfcc (0.30.0+ds-1ubuntu2) over (0.29.1+ds-1ubuntu7) ...
 88s Preparing to unpack .../bpfcc-tools_0.30.0+ds-1ubuntu2_all.deb ...
 88s Unpacking bpfcc-tools (0.30.0+ds-1ubuntu2) over (0.29.1+ds-1ubuntu7) ...
 88s Preparing to unpack .../bpftrace_0.21.0-1ubuntu6_s390x.deb ...
 88s Unpacking bpftrace (0.21.0-1ubuntu6) over (0.20.2-1ubuntu4) ...
 88s Setting up mawk (1.3.4.20240622-2) ...
 88s Setting up libbpfcc:s390x (0.30.0+ds-1ubuntu2) ...
 88s Setting up python3-bpfcc (0.30.0+ds-1ubuntu2) ...
 88s Setting up bpftrace (0.21.0-1ubuntu6) ...
 88s Setting up bpfcc-tools (0.30.0+ds-1ubuntu2) ...
 88s Processing triggers for man-db (2.12.1-2) ...
 89s Processing triggers for libc-bin (2.39-0ubuntu9) ...
 89s Reading package lists...
 90s Building dependency tree...
 90s Reading state information...
 90s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 90s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease
 90s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease
 90s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease
 90s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease
 91s Reading package lists...
 91s Reading package lists...
 92s Building dependency tree...
 92s Reading state information...
 92s Calculating upgrade...
 92s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 92s Reading package lists...
 92s Building dependency tree...
 92s Reading state information...
 93s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 95s autopkgtest [16:10:18]: testbed running kernel: Linux 6.8.0-31-generic #31-Ubuntu SMP Sat Apr 20 00:14:26 UTC 2024
 96s autopkgtest [16:10:19]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-gbm
 97s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed/universe r-cran-gbm 2.1.9-1 (dsc) [2188 B]
 97s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/universe r-cran-gbm 2.1.9-1 (tar) [455 kB]
 97s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/universe r-cran-gbm 2.1.9-1 (diff) [3272 B]
 98s gpgv: Signature made Fri Jan 26 21:55:14 2024 UTC
 98s gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
 98s gpgv:                issuer "tille@debian.org"
 98s gpgv: Can't check signature: No public key
 98s dpkg-source: warning: cannot verify inline signature for ./r-cran-gbm_2.1.9-1.dsc: no acceptable signature found
 98s autopkgtest [16:10:21]: testing package r-cran-gbm version 2.1.9-1
 98s autopkgtest [16:10:21]: build not needed
100s autopkgtest [16:10:23]: test run-unit-test: preparing testbed
101s Reading package lists...
101s Building dependency tree...
101s Reading state information...
101s Starting pkgProblemResolver with broken count: 0
101s Starting 2 pkgProblemResolver with broken count: 0
101s Done
101s The following additional packages will be installed:
101s   fontconfig fonts-glyphicons-halflings fonts-mathjax libblas3 libcairo2
101s   libdatrie1 libgfortran5 libice6 libjs-bootstrap libjs-highlight.js
101s   libjs-jquery libjs-jquery-datatables libjs-mathjax liblapack3 libpango-1.0-0
101s   libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0
101s   libsm6 libtcl8.6 libthai-data libthai0 libtk8.6 libxcb-render0 libxcb-shm0
101s   libxft2 libxrender1 libxss1 libxt6t64 node-html5shiv node-normalize.css
101s   r-base-core r-cran-askpass r-cran-cli r-cran-colorspace r-cran-covr
101s   r-cran-crayon r-cran-curl r-cran-digest r-cran-evaluate r-cran-fansi
101s   r-cran-farver r-cran-gbm r-cran-ggplot2 r-cran-glue r-cran-gridextra
101s   r-cran-gtable r-cran-highr r-cran-httr r-cran-isoband r-cran-jsonlite
101s   r-cran-knitr r-cran-labeling r-cran-lattice r-cran-lazyeval r-cran-lifecycle
101s   r-cran-magrittr r-cran-mass r-cran-matrix r-cran-mgcv r-cran-mime
101s   r-cran-munsell r-cran-nlme r-cran-openssl r-cran-pillar r-cran-pkgconfig
101s   r-cran-r6 r-cran-rcolorbrewer r-cran-rex r-cran-rlang r-cran-runit
101s   r-cran-scales r-cran-survival r-cran-sys r-cran-tibble r-cran-tinytest
101s   r-cran-utf8 r-cran-vctrs r-cran-viridis r-cran-viridislite r-cran-withr
101s   r-cran-xfun r-cran-yaml unzip x11-common xdg-utils zip
101s Suggested packages:
101s   fonts-mathjax-extras fonts-stix libjs-mathjax-doc tcl8.6 tk8.6 nodejs
101s   elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html r-cran-kernsmooth
101s   r-cran-kernlab r-cran-mvtnorm r-cran-vcd r-cran-shiny r-cran-shinyjs
101s   r-cran-dplyr r-cran-png r-cran-jpeg r-cran-rmarkdown r-cran-rstudioapi
101s   r-cran-magick r-cran-sf r-cran-bit64 r-cran-dbi r-cran-formattable
101s   r-cran-nanotime r-cran-palmerpenguins r-cran-stringi r-cran-units
101s   r-cran-vdiffr r-cran-testthat r-cran-hmisc r-cran-roxygen2 r-cran-rvest
101s   r-cran-stringr r-cran-spelling r-cran-bench r-cran-blob r-cran-brio
101s   r-cran-callr r-cran-here r-cran-hms r-cran-htmltools r-cran-pkgbuild
101s   r-cran-pkgload r-cran-purrr r-cran-tidyr
101s Recommended packages:
101s   javascript-common r-recommended r-base-dev r-doc-html r-cran-testthat
101s   r-cran-callr r-cran-htmltools r-cran-htmlwidgets r-cran-mockery
101s   r-cran-processx r-cran-ps r-cran-rmarkdown r-cran-rprojroot
101s   r-cran-rstudioapi r-cran-whoami r-cran-dt r-cran-xml2 r-cran-memoise
101s   r-cran-spelling r-cran-later r-cran-httpuv r-cran-webutils r-cran-unitizer
101s   r-cran-dplyr r-cran-hexbin r-cran-hmisc r-cran-mapproj r-cran-maps
101s   r-cran-multcomp r-cran-profvis r-cran-quantreg r-cran-ragg r-cran-rpart
101s   r-cran-sf r-cran-svglite r-cran-vdiffr r-cran-dbi r-cran-rsqlite
101s   r-cran-waldo r-cran-markdown r-cran-testit r-cran-jpeg r-cran-png
101s   r-cran-readr r-cran-r.rsp r-cran-bslib r-cran-codetools r-cran-formatr
101s   r-cran-gridsvg r-cran-magick r-cran-reticulate r-cran-rgl r-cran-sass
101s   r-cran-tikzdevice r-cran-tinytex r-cran-webshot node-highlight.js
101s   r-cran-lintr r-cran-tidyverse r-cran-sodium r-cran-lubridate r-cran-fs
101s   r-cran-usethis r-cran-bit64 r-cran-dichromat r-cran-hms r-cran-stringi
101s   r-cran-data.table r-cran-mockr r-cran-formattable r-cran-generics
101s   r-cran-pkgdown r-cran-zeallot r-cran-remotes r-cran-renv
101s   libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
101s   x11-xserver-utils
101s The following NEW packages will be installed:
101s   autopkgtest-satdep fontconfig fonts-glyphicons-halflings fonts-mathjax
101s   libblas3 libcairo2 libdatrie1 libgfortran5 libice6 libjs-bootstrap
101s   libjs-highlight.js libjs-jquery libjs-jquery-datatables libjs-mathjax
101s   liblapack3 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
101s   libpaper-utils libpaper1 libpixman-1-0 libsm6 libtcl8.6 libthai-data
101s   libthai0 libtk8.6 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1
101s   libxt6t64 node-html5shiv node-normalize.css r-base-core r-cran-askpass
101s   r-cran-cli r-cran-colorspace r-cran-covr r-cran-crayon r-cran-curl
101s   r-cran-digest r-cran-evaluate r-cran-fansi r-cran-farver r-cran-gbm
101s   r-cran-ggplot2 r-cran-glue r-cran-gridextra r-cran-gtable r-cran-highr
101s   r-cran-httr r-cran-isoband r-cran-jsonlite r-cran-knitr r-cran-labeling
101s   r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-magrittr r-cran-mass
101s   r-cran-matrix r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme
101s   r-cran-openssl r-cran-pillar r-cran-pkgconfig r-cran-r6 r-cran-rcolorbrewer
101s   r-cran-rex r-cran-rlang r-cran-runit r-cran-scales r-cran-survival
101s   r-cran-sys r-cran-tibble r-cran-tinytest r-cran-utf8 r-cran-vctrs
101s   r-cran-viridis r-cran-viridislite r-cran-withr r-cran-xfun r-cran-yaml unzip
101s   x11-common xdg-utils zip
101s 0 upgraded, 90 newly installed, 0 to remove and 0 not upgraded.
101s Need to get 91.0 MB/91.0 MB of archives.
101s After this operation, 195 MB of additional disk space will be used.
101s Get:1 /tmp/autopkgtest.ijhwM7/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [744 B]
102s Get:2 http://ftpmaster.internal/ubuntu oracular/main s390x fontconfig s390x 2.15.0-1.1ubuntu2 [191 kB]
102s Get:3 http://ftpmaster.internal/ubuntu oracular/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB]
102s Get:4 http://ftpmaster.internal/ubuntu oracular/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB]
102s Get:5 http://ftpmaster.internal/ubuntu oracular/main s390x libblas3 s390x 3.12.0-3build1 [245 kB]
102s Get:6 http://ftpmaster.internal/ubuntu oracular/main s390x libpixman-1-0 s390x 0.42.2-1build1 [206 kB]
102s Get:7 http://ftpmaster.internal/ubuntu oracular/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB]
102s Get:8 http://ftpmaster.internal/ubuntu oracular/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B]
102s Get:9 http://ftpmaster.internal/ubuntu oracular/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB]
102s Get:10 http://ftpmaster.internal/ubuntu oracular/main s390x libcairo2 s390x 1.18.0-3build1 [589 kB]
102s Get:11 http://ftpmaster.internal/ubuntu oracular/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB]
102s Get:12 http://ftpmaster.internal/ubuntu oracular/main s390x libgfortran5 s390x 14.1.0-5ubuntu1 [587 kB]
102s Get:13 http://ftpmaster.internal/ubuntu oracular/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB]
102s Get:14 http://ftpmaster.internal/ubuntu oracular/main s390x libice6 s390x 2:1.0.10-1build3 [44.8 kB]
102s Get:15 http://ftpmaster.internal/ubuntu oracular/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB]
102s Get:16 http://ftpmaster.internal/ubuntu oracular/universe s390x libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB]
102s Get:17 http://ftpmaster.internal/ubuntu oracular/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
102s Get:18 http://ftpmaster.internal/ubuntu oracular/universe s390x libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB]
102s Get:19 http://ftpmaster.internal/ubuntu oracular/main s390x liblapack3 s390x 3.12.0-3build1 [2976 kB]
102s Get:20 http://ftpmaster.internal/ubuntu oracular/main s390x libthai-data all 0.1.29-2build1 [158 kB]
102s Get:21 http://ftpmaster.internal/ubuntu oracular/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB]
102s Get:22 http://ftpmaster.internal/ubuntu oracular/main s390x libpango-1.0-0 s390x 1.54.0+ds-1 [243 kB]
102s Get:23 http://ftpmaster.internal/ubuntu oracular/main s390x libpangoft2-1.0-0 s390x 1.54.0+ds-1 [43.4 kB]
102s Get:24 http://ftpmaster.internal/ubuntu oracular/main s390x libpangocairo-1.0-0 s390x 1.54.0+ds-1 [28.2 kB]
102s Get:25 http://ftpmaster.internal/ubuntu oracular/main s390x libpaper1 s390x 1.1.29build1 [13.4 kB]
102s Get:26 http://ftpmaster.internal/ubuntu oracular/main s390x libpaper-utils s390x 1.1.29build1 [8442 B]
102s Get:27 http://ftpmaster.internal/ubuntu oracular/main s390x libsm6 s390x 2:1.2.3-1build3 [17.7 kB]
102s Get:28 http://ftpmaster.internal/ubuntu oracular/main s390x libtcl8.6 s390x 8.6.14+dfsg-1build1 [1038 kB]
102s Get:29 http://ftpmaster.internal/ubuntu oracular/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB]
102s Get:30 http://ftpmaster.internal/ubuntu oracular/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B]
102s Get:31 http://ftpmaster.internal/ubuntu oracular/main s390x libtk8.6 s390x 8.6.14-1build1 [833 kB]
102s Get:32 http://ftpmaster.internal/ubuntu oracular/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB]
102s Get:33 http://ftpmaster.internal/ubuntu oracular/universe s390x node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
102s Get:34 http://ftpmaster.internal/ubuntu oracular/universe s390x node-normalize.css all 8.0.1-5 [10.8 kB]
102s Get:35 http://ftpmaster.internal/ubuntu oracular/main s390x zip s390x 3.0-13build1 [189 kB]
103s Get:36 http://ftpmaster.internal/ubuntu oracular/main s390x unzip s390x 6.0-28ubuntu5 [186 kB]
103s Get:37 http://ftpmaster.internal/ubuntu oracular/main s390x xdg-utils all 1.2.1-0ubuntu1 [67.5 kB]
103s Get:38 http://ftpmaster.internal/ubuntu oracular/universe s390x r-base-core s390x 4.4.1-1 [28.6 MB]
103s Get:39 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-sys s390x 3.4.2-1 [44.5 kB]
103s Get:40 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-askpass s390x 1.2.0-1 [24.5 kB]
103s Get:41 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-cli s390x 3.6.2-1 [1382 kB]
103s Get:42 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-colorspace s390x 2.1-0+dfsg-1 [1540 kB]
103s Get:43 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-digest s390x 0.6.36-1 [204 kB]
103s Get:44 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-jsonlite s390x 1.8.8+dfsg-1 [444 kB]
103s Get:45 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-lazyeval s390x 0.2.2-1build1 [143 kB]
103s Get:46 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-rex all 1.2.1-1 [129 kB]
103s Get:47 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-curl s390x 5.2.1+dfsg-1 [180 kB]
103s Get:48 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-mime s390x 0.12-2 [35.8 kB]
103s Get:49 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-openssl s390x 2.1.1+dfsg-2build2 [403 kB]
103s Get:50 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-r6 all 2.5.1-1 [99.0 kB]
103s Get:51 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-httr all 1.4.7+dfsg-1 [459 kB]
103s Get:52 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-crayon all 1.5.2-1 [164 kB]
103s Get:53 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-withr all 2.5.0-1 [225 kB]
104s Get:54 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-yaml s390x 2.3.8-2 [112 kB]
104s Get:55 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-covr s390x 3.6.4+dfsg-1 [302 kB]
104s Get:56 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-evaluate all 0.24.0-1 [93.5 kB]
104s Get:57 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-fansi s390x 1.0.5-1 [615 kB]
104s Get:58 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-farver s390x 2.1.2-1 [1353 kB]
104s Get:59 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-lattice s390x 0.22-6-1 [1340 kB]
104s Get:60 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-matrix s390x 1.7-0-3 [4404 kB]
104s Get:61 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-survival s390x 3.7-0-1 [6308 kB]
104s Get:62 http://ftpmaster.internal/ubuntu oracular-proposed/universe s390x r-cran-gbm s390x 2.1.9-1 [583 kB]
104s Get:63 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-glue s390x 1.7.0-1 [154 kB]
104s Get:64 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-rlang s390x 1.1.4-1 [1715 kB]
104s Get:65 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
104s Get:66 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-gtable all 0.3.5+dfsg-1 [192 kB]
104s Get:67 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-isoband s390x 0.2.7-1 [1481 kB]
105s Get:68 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-mass s390x 7.3-61-1 [1112 kB]
105s Get:69 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-nlme s390x 3.1.165-1 [2317 kB]
105s Get:70 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-mgcv s390x 1.9-1-1 [3348 kB]
105s Get:71 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-labeling all 0.4.3-1 [62.1 kB]
105s Get:72 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-munsell all 0.5.1-1 [213 kB]
105s Get:73 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB]
105s Get:74 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-viridislite all 0.4.2-2 [1088 kB]
105s Get:75 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-scales all 1.3.0-1 [603 kB]
105s Get:76 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB]
105s Get:77 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-utf8 s390x 1.2.4-1 [143 kB]
105s Get:78 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB]
105s Get:79 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-pillar all 1.9.0+dfsg-1 [464 kB]
105s Get:80 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB]
105s Get:81 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-tibble s390x 3.2.1+dfsg-2 [415 kB]
105s Get:82 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB]
105s Get:83 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-gridextra all 2.3-3build1 [1024 kB]
105s Get:84 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-xfun s390x 0.45+dfsg-1 [517 kB]
105s Get:85 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-highr all 0.11+dfsg-1 [38.5 kB]
105s Get:86 http://ftpmaster.internal/ubuntu oracular/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB]
105s Get:87 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-knitr all 1.47+dfsg-1 [911 kB]
105s Get:88 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-runit all 0.4.33-1 [377 kB]
105s Get:89 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-tinytest all 1.4.1-1 [674 kB]
105s Get:90 http://ftpmaster.internal/ubuntu oracular/universe s390x r-cran-viridis all 0.6.5-1 [2770 kB]
106s Preconfiguring packages ...
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106s Preparing to unpack .../00-fontconfig_2.15.0-1.1ubuntu2_s390x.deb ...
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106s Selecting previously unselected package fonts-glyphicons-halflings.
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106s Selecting previously unselected package libblas3:s390x.
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106s Selecting previously unselected package libpixman-1-0:s390x.
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106s Selecting previously unselected package libxrender1:s390x.
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106s Selecting previously unselected package libcairo2:s390x.
106s Preparing to unpack .../08-libcairo2_1.18.0-3build1_s390x.deb ...
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106s Selecting previously unselected package libdatrie1:s390x.
106s Preparing to unpack .../09-libdatrie1_0.2.13-3build1_s390x.deb ...
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106s Selecting previously unselected package libgfortran5:s390x.
106s Preparing to unpack .../10-libgfortran5_14.1.0-5ubuntu1_s390x.deb ...
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106s Selecting previously unselected package x11-common.
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106s Selecting previously unselected package libice6:s390x.
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106s Selecting previously unselected package libjs-bootstrap.
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106s Selecting previously unselected package libjs-jquery-datatables.
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106s Selecting previously unselected package liblapack3:s390x.
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106s Selecting previously unselected package libpango-1.0-0:s390x.
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106s Selecting previously unselected package libpangoft2-1.0-0:s390x.
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106s Selecting previously unselected package libpangocairo-1.0-0:s390x.
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106s Selecting previously unselected package libpaper1:s390x.
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106s Selecting previously unselected package libpaper-utils.
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106s Selecting previously unselected package libsm6:s390x.
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106s Selecting previously unselected package libtcl8.6:s390x.
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107s Selecting previously unselected package libxft2:s390x.
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107s Selecting previously unselected package libxss1:s390x.
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107s Selecting previously unselected package libtk8.6:s390x.
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107s Selecting previously unselected package libxt6t64:s390x.
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107s Selecting previously unselected package node-html5shiv.
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107s Selecting previously unselected package r-base-core.
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107s Selecting previously unselected package r-cran-sys.
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107s Selecting previously unselected package r-cran-askpass.
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107s Selecting previously unselected package r-cran-cli.
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107s Selecting previously unselected package r-cran-colorspace.
107s Preparing to unpack .../40-r-cran-colorspace_2.1-0+dfsg-1_s390x.deb ...
107s Unpacking r-cran-colorspace (2.1-0+dfsg-1) ...
107s Selecting previously unselected package r-cran-digest.
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107s Unpacking r-cran-digest (0.6.36-1) ...
107s Selecting previously unselected package r-cran-jsonlite.
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107s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ...
107s Selecting previously unselected package r-cran-lazyeval.
107s Preparing to unpack .../43-r-cran-lazyeval_0.2.2-1build1_s390x.deb ...
107s Unpacking r-cran-lazyeval (0.2.2-1build1) ...
107s Selecting previously unselected package r-cran-rex.
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107s Unpacking r-cran-rex (1.2.1-1) ...
107s Selecting previously unselected package r-cran-curl.
107s Preparing to unpack .../45-r-cran-curl_5.2.1+dfsg-1_s390x.deb ...
107s Unpacking r-cran-curl (5.2.1+dfsg-1) ...
107s Selecting previously unselected package r-cran-mime.
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108s Selecting previously unselected package r-cran-openssl.
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108s Unpacking r-cran-openssl (2.1.1+dfsg-2build2) ...
108s Selecting previously unselected package r-cran-r6.
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108s Selecting previously unselected package r-cran-httr.
108s Preparing to unpack .../49-r-cran-httr_1.4.7+dfsg-1_all.deb ...
108s Unpacking r-cran-httr (1.4.7+dfsg-1) ...
108s Selecting previously unselected package r-cran-crayon.
108s Preparing to unpack .../50-r-cran-crayon_1.5.2-1_all.deb ...
108s Unpacking r-cran-crayon (1.5.2-1) ...
108s Selecting previously unselected package r-cran-withr.
108s Preparing to unpack .../51-r-cran-withr_2.5.0-1_all.deb ...
108s Unpacking r-cran-withr (2.5.0-1) ...
108s Selecting previously unselected package r-cran-yaml.
108s Preparing to unpack .../52-r-cran-yaml_2.3.8-2_s390x.deb ...
108s Unpacking r-cran-yaml (2.3.8-2) ...
108s Selecting previously unselected package r-cran-covr.
108s Preparing to unpack .../53-r-cran-covr_3.6.4+dfsg-1_s390x.deb ...
108s Unpacking r-cran-covr (3.6.4+dfsg-1) ...
108s Selecting previously unselected package r-cran-evaluate.
108s Preparing to unpack .../54-r-cran-evaluate_0.24.0-1_all.deb ...
108s Unpacking r-cran-evaluate (0.24.0-1) ...
108s Selecting previously unselected package r-cran-fansi.
108s Preparing to unpack .../55-r-cran-fansi_1.0.5-1_s390x.deb ...
108s Unpacking r-cran-fansi (1.0.5-1) ...
108s Selecting previously unselected package r-cran-farver.
108s Preparing to unpack .../56-r-cran-farver_2.1.2-1_s390x.deb ...
108s Unpacking r-cran-farver (2.1.2-1) ...
108s Selecting previously unselected package r-cran-lattice.
108s Preparing to unpack .../57-r-cran-lattice_0.22-6-1_s390x.deb ...
108s Unpacking r-cran-lattice (0.22-6-1) ...
108s Selecting previously unselected package r-cran-matrix.
108s Preparing to unpack .../58-r-cran-matrix_1.7-0-3_s390x.deb ...
108s Unpacking r-cran-matrix (1.7-0-3) ...
108s Selecting previously unselected package r-cran-survival.
108s Preparing to unpack .../59-r-cran-survival_3.7-0-1_s390x.deb ...
108s Unpacking r-cran-survival (3.7-0-1) ...
108s Selecting previously unselected package r-cran-gbm.
108s Preparing to unpack .../60-r-cran-gbm_2.1.9-1_s390x.deb ...
108s Unpacking r-cran-gbm (2.1.9-1) ...
108s Selecting previously unselected package r-cran-glue.
108s Preparing to unpack .../61-r-cran-glue_1.7.0-1_s390x.deb ...
108s Unpacking r-cran-glue (1.7.0-1) ...
108s Selecting previously unselected package r-cran-rlang.
108s Preparing to unpack .../62-r-cran-rlang_1.1.4-1_s390x.deb ...
108s Unpacking r-cran-rlang (1.1.4-1) ...
108s Selecting previously unselected package r-cran-lifecycle.
108s Preparing to unpack .../63-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ...
108s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ...
108s Selecting previously unselected package r-cran-gtable.
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108s Unpacking r-cran-gtable (0.3.5+dfsg-1) ...
108s Selecting previously unselected package r-cran-isoband.
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108s Unpacking r-cran-isoband (0.2.7-1) ...
108s Selecting previously unselected package r-cran-mass.
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108s Unpacking r-cran-mass (7.3-61-1) ...
108s Selecting previously unselected package r-cran-nlme.
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108s Unpacking r-cran-nlme (3.1.165-1) ...
108s Selecting previously unselected package r-cran-mgcv.
108s Preparing to unpack .../68-r-cran-mgcv_1.9-1-1_s390x.deb ...
108s Unpacking r-cran-mgcv (1.9-1-1) ...
108s Selecting previously unselected package r-cran-labeling.
108s Preparing to unpack .../69-r-cran-labeling_0.4.3-1_all.deb ...
108s Unpacking r-cran-labeling (0.4.3-1) ...
108s Selecting previously unselected package r-cran-munsell.
108s Preparing to unpack .../70-r-cran-munsell_0.5.1-1_all.deb ...
108s Unpacking r-cran-munsell (0.5.1-1) ...
108s Selecting previously unselected package r-cran-rcolorbrewer.
108s Preparing to unpack .../71-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ...
108s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ...
109s Selecting previously unselected package r-cran-viridislite.
109s Preparing to unpack .../72-r-cran-viridislite_0.4.2-2_all.deb ...
109s Unpacking r-cran-viridislite (0.4.2-2) ...
109s Selecting previously unselected package r-cran-scales.
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109s Unpacking r-cran-scales (1.3.0-1) ...
109s Selecting previously unselected package r-cran-magrittr.
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109s Unpacking r-cran-magrittr (2.0.3-1) ...
109s Selecting previously unselected package r-cran-utf8.
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109s Unpacking r-cran-utf8 (1.2.4-1) ...
109s Selecting previously unselected package r-cran-vctrs.
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109s Selecting previously unselected package r-cran-pillar.
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109s Unpacking r-cran-pillar (1.9.0+dfsg-1) ...
109s Selecting previously unselected package r-cran-pkgconfig.
109s Preparing to unpack .../78-r-cran-pkgconfig_2.0.3-2build1_all.deb ...
109s Unpacking r-cran-pkgconfig (2.0.3-2build1) ...
109s Selecting previously unselected package r-cran-tibble.
109s Preparing to unpack .../79-r-cran-tibble_3.2.1+dfsg-2_s390x.deb ...
109s Unpacking r-cran-tibble (3.2.1+dfsg-2) ...
109s Selecting previously unselected package r-cran-ggplot2.
109s Preparing to unpack .../80-r-cran-ggplot2_3.4.4+dfsg-1_all.deb ...
109s Unpacking r-cran-ggplot2 (3.4.4+dfsg-1) ...
109s Selecting previously unselected package r-cran-gridextra.
109s Preparing to unpack .../81-r-cran-gridextra_2.3-3build1_all.deb ...
109s Unpacking r-cran-gridextra (2.3-3build1) ...
109s Selecting previously unselected package r-cran-xfun.
109s Preparing to unpack .../82-r-cran-xfun_0.45+dfsg-1_s390x.deb ...
109s Unpacking r-cran-xfun (0.45+dfsg-1) ...
109s Selecting previously unselected package r-cran-highr.
109s Preparing to unpack .../83-r-cran-highr_0.11+dfsg-1_all.deb ...
109s Unpacking r-cran-highr (0.11+dfsg-1) ...
109s Selecting previously unselected package libjs-mathjax.
109s Preparing to unpack .../84-libjs-mathjax_2.7.9+dfsg-1_all.deb ...
109s Unpacking libjs-mathjax (2.7.9+dfsg-1) ...
110s Selecting previously unselected package r-cran-knitr.
110s Preparing to unpack .../85-r-cran-knitr_1.47+dfsg-1_all.deb ...
110s Unpacking r-cran-knitr (1.47+dfsg-1) ...
110s Selecting previously unselected package r-cran-runit.
110s Preparing to unpack .../86-r-cran-runit_0.4.33-1_all.deb ...
110s Unpacking r-cran-runit (0.4.33-1) ...
110s Selecting previously unselected package r-cran-tinytest.
110s Preparing to unpack .../87-r-cran-tinytest_1.4.1-1_all.deb ...
110s Unpacking r-cran-tinytest (1.4.1-1) ...
111s Selecting previously unselected package r-cran-viridis.
111s Preparing to unpack .../88-r-cran-viridis_0.6.5-1_all.deb ...
111s Unpacking r-cran-viridis (0.6.5-1) ...
111s Selecting previously unselected package autopkgtest-satdep.
111s Preparing to unpack .../89-1-autopkgtest-satdep.deb ...
111s Unpacking autopkgtest-satdep (0) ...
111s Setting up libpixman-1-0:s390x (0.42.2-1build1) ...
111s Setting up libpaper1:s390x (1.1.29build1) ...
111s 
111s Creating config file /etc/papersize with new version
111s Setting up fontconfig (2.15.0-1.1ubuntu2) ...
113s Regenerating fonts cache... done.
113s Setting up fonts-mathjax (2.7.9+dfsg-1) ...
113s Setting up libjs-mathjax (2.7.9+dfsg-1) ...
113s Setting up libxrender1:s390x (1:0.9.10-1.1build1) ...
113s Setting up libdatrie1:s390x (0.2.13-3build1) ...
113s Setting up libxcb-render0:s390x (1.17.0-2) ...
113s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
113s Setting up unzip (6.0-28ubuntu5) ...
113s Setting up x11-common (1:7.7+23ubuntu3) ...
113s Setting up node-html5shiv (3.7.3+dfsg-5) ...
113s Setting up libxcb-shm0:s390x (1.17.0-2) ...
113s Setting up libpaper-utils (1.1.29build1) ...
113s Setting up libcairo2:s390x (1.18.0-3build1) ...
113s Setting up zip (3.0-13build1) ...
113s Setting up libblas3:s390x (3.12.0-3build1) ...
113s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode
113s Setting up libtcl8.6:s390x (8.6.14+dfsg-1build1) ...
113s Setting up libgfortran5:s390x (14.1.0-5ubuntu1) ...
113s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ...
113s Setting up libthai-data (0.1.29-2build1) ...
113s Setting up libxss1:s390x (1:1.2.3-1build3) ...
113s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
113s Setting up node-normalize.css (8.0.1-5) ...
113s Setting up xdg-utils (1.2.1-0ubuntu1) ...
113s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
113s Setting up libjs-bootstrap (3.4.1+dfsg-3) ...
113s Setting up libice6:s390x (2:1.0.10-1build3) ...
113s Setting up liblapack3:s390x (3.12.0-3build1) ...
113s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode
113s Setting up libxft2:s390x (2.3.6-1build1) ...
113s Setting up libtk8.6:s390x (8.6.14-1build1) ...
113s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ...
113s Setting up libthai0:s390x (0.1.29-2build1) ...
113s Setting up libsm6:s390x (2:1.2.3-1build3) ...
113s Setting up libpango-1.0-0:s390x (1.54.0+ds-1) ...
113s Setting up libxt6t64:s390x (1:1.2.1-1.2build1) ...
113s Setting up libpangoft2-1.0-0:s390x (1.54.0+ds-1) ...
113s Setting up libpangocairo-1.0-0:s390x (1.54.0+ds-1) ...
113s Setting up r-base-core (4.4.1-1) ...
114s 
114s Creating config file /etc/R/Renviron with new version
114s Setting up r-cran-crayon (1.5.2-1) ...
114s Setting up r-cran-labeling (0.4.3-1) ...
114s Setting up r-cran-lattice (0.22-6-1) ...
114s Setting up r-cran-tinytest (1.4.1-1) ...
114s Setting up r-cran-nlme (3.1.165-1) ...
114s Setting up r-cran-farver (2.1.2-1) ...
114s Setting up r-cran-viridislite (0.4.2-2) ...
114s Setting up r-cran-lazyeval (0.2.2-1build1) ...
114s Setting up r-cran-r6 (2.5.1-1) ...
114s Setting up r-cran-magrittr (2.0.3-1) ...
114s Setting up r-cran-curl (5.2.1+dfsg-1) ...
114s Setting up r-cran-rlang (1.1.4-1) ...
114s Setting up r-cran-xfun (0.45+dfsg-1) ...
114s Setting up r-cran-sys (3.4.2-1) ...
114s Setting up r-cran-withr (2.5.0-1) ...
114s Setting up r-cran-mime (0.12-2) ...
114s Setting up r-cran-digest (0.6.36-1) ...
114s Setting up r-cran-yaml (2.3.8-2) ...
114s Setting up r-cran-evaluate (0.24.0-1) ...
114s Setting up r-cran-highr (0.11+dfsg-1) ...
114s Setting up r-cran-fansi (1.0.5-1) ...
114s Setting up r-cran-mass (7.3-61-1) ...
114s Setting up r-cran-glue (1.7.0-1) ...
114s Setting up r-cran-cli (3.6.2-1) ...
114s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
114s Setting up r-cran-askpass (1.2.0-1) ...
114s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ...
114s Setting up r-cran-pkgconfig (2.0.3-2build1) ...
114s Setting up r-cran-utf8 (1.2.4-1) ...
114s Setting up r-cran-colorspace (2.1-0+dfsg-1) ...
114s Setting up r-cran-rex (1.2.1-1) ...
114s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ...
114s Setting up r-cran-isoband (0.2.7-1) ...
114s Setting up r-cran-runit (0.4.33-1) ...
114s Setting up r-cran-gtable (0.3.5+dfsg-1) ...
114s Setting up r-cran-matrix (1.7-0-3) ...
114s Setting up r-cran-knitr (1.47+dfsg-1) ...
114s Setting up r-cran-mgcv (1.9-1-1) ...
114s Setting up r-cran-vctrs (0.6.5-1) ...
114s Setting up r-cran-pillar (1.9.0+dfsg-1) ...
114s Setting up r-cran-openssl (2.1.1+dfsg-2build2) ...
114s Setting up r-cran-munsell (0.5.1-1) ...
114s Setting up r-cran-tibble (3.2.1+dfsg-2) ...
114s Setting up r-cran-survival (3.7-0-1) ...
114s Setting up r-cran-httr (1.4.7+dfsg-1) ...
114s Setting up r-cran-gridextra (2.3-3build1) ...
114s Setting up r-cran-scales (1.3.0-1) ...
114s Setting up r-cran-covr (3.6.4+dfsg-1) ...
114s Setting up r-cran-gbm (2.1.9-1) ...
114s Setting up r-cran-ggplot2 (3.4.4+dfsg-1) ...
114s Setting up r-cran-viridis (0.6.5-1) ...
114s Setting up autopkgtest-satdep (0) ...
114s Processing triggers for man-db (2.12.1-2) ...
114s Processing triggers for install-info (7.1-3build2) ...
114s Processing triggers for libc-bin (2.39-0ubuntu9) ...
119s (Reading database ... 66156 files and directories currently installed.)
119s Removing autopkgtest-satdep (0) ...
120s autopkgtest [16:10:43]: test run-unit-test: [-----------------------
120s BEGIN TEST tinytest.R
120s 
120s R version 4.4.1 (2024-06-14) -- "Race for Your Life"
120s Copyright (C) 2024 The R Foundation for Statistical Computing
120s Platform: s390x-ibm-linux-gnu
120s 
120s R is free software and comes with ABSOLUTELY NO WARRANTY.
120s You are welcome to redistribute it under certain conditions.
120s Type 'license()' or 'licence()' for distribution details.
120s 
120s R is a collaborative project with many contributors.
120s Type 'contributors()' for more information and
120s 'citation()' on how to cite R or R packages in publications.
120s 
120s Type 'demo()' for some demos, 'help()' for on-line help, or
120s 'help.start()' for an HTML browser interface to help.
120s Type 'q()' to quit R.
120s 
120s > 
120s > if ( requireNamespace("tinytest", quietly = TRUE) ){
120s +   home <- length(unclass(packageVersion("gbm"))[[1L]]) == 4
120s +   tinytest::test_package("gbm", at_home = home)
120s + }
121s Loaded gbm 2.1.9
121s This version of gbm is no longer under development. Consider transitioning to gbm3, https://github.com/gbm-developers/gbm3
121s 
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    0 tests    CV: 1 
122s CV: 2 
122s CV: 3 
122s CV: 4 
123s CV: 5 
124s 
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    0 tests    
test_bernoulli.R..............    1 tests OK 2.8s
124s 
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    CV: 1 
125s CV: 2 
127s CV: 3 
128s CV: 4 
129s CV: 5 
132s 
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    0 tests    
test_coxph.R..................    1 tests OK 7.8s
132s 
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    CV: 1 
132s CV: 2 
133s CV: 3 
134s CV: 4 
134s CV: 5 
135s CV: 6 
135s CV: 7 
136s CV: 8 
136s CV: 9 
137s CV: 10 
138s 
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    0 tests    
test_least_squares.R..........    1 tests 1 fails 
test_least_squares.R..........    2 tests 2 fails 6.4s
138s 
test_relative_influence.R.....    0 tests    
test_relative_influence.R.....    0 tests    
test_relative_influence.R.....    0 tests    
test_relative_influence.R.....    0 tests    
test_relative_influence.R.....    0 tests    
test_relative_influence.R.....    0 tests    
test_relative_influence.R.....    0 tests    Distribution not specified, assuming bernoulli ...
138s CV: 1 
140s CV: 2 
141s CV: 3 
143s CV: 4 
145s CV: 5 
148s 
test_relative_influence.R.....    0 tests    n.trees not given. Using 1000 trees.
149s 
test_relative_influence.R.....    0 tests    
test_relative_influence.R.....    0 tests    
test_relative_influence.R.....    0 tests    
test_relative_influence.R.....    1 tests OK 10.2s
149s ----- FAILED[data]: test_least_squares.R<68--69>
149s  call| expect_true(abs(mean(data2$Y - f.predict)) < 0.01, info = "LS: checking if Gaussian absolute error within tolerance.")
149s  diff| Expected TRUE, got FALSE
149s  info| LS: checking if Gaussian absolute error within tolerance.
149s ----- FAILED[data]: test_least_squares.R<70--71>
149s  call| expect_true(sd(data2$Y - f.predict) < sigma, info = "LS: checking if Gaussian squared error within tolerance.")
149s  diff| Expected TRUE, got FALSE
149s  info| LS: checking if Gaussian squared error within tolerance.
149s Error: 2 out of 5 tests failed
149s Execution halted
149s autopkgtest [16:11:12]: test run-unit-test: -----------------------]
149s autopkgtest [16:11:12]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
149s run-unit-test        FAIL non-zero exit status 1
150s autopkgtest [16:11:13]: test pkg-r-autopkgtest: preparing testbed
151s Reading package lists...
151s Building dependency tree...
151s Reading state information...
151s Starting pkgProblemResolver with broken count: 0
151s Starting 2 pkgProblemResolver with broken count: 0
151s Done
152s The following additional packages will be installed:
152s   build-essential cpp cpp-14 cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu
152s   dctrl-tools g++ g++-14 g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14
152s   gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-14
152s   gfortran-14-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools libasan8
152s   libatomic1 libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev
152s   libgfortran-14-dev libicu-dev libisl23 libitm1 libjpeg-dev
152s   libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblzma-dev libmpc3
152s   libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
152s   libpkgconf3 libpng-dev libreadline-dev libstdc++-14-dev libtirpc-dev
152s   libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev zlib1g-dev
152s Suggested packages:
152s   cpp-doc gcc-14-locales cpp-14-doc debtags gcc-14-doc gcc-multilib
152s   manpages-dev autoconf automake libtool flex bison gdb gcc-doc
152s   gdb-s390x-linux-gnu gfortran-doc gfortran-14-doc libcoarrays-dev
152s   liblapack-doc icu-doc liblzma-doc ncurses-doc readline-doc libstdc++-14-doc
152s   texlive-base texlive-latex-base texlive-plain-generic
152s   texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils
152s   texlive-latex-recommended texlive-latex-extra texinfo
152s Recommended packages:
152s   bzip2-doc libpng-tools
152s The following NEW packages will be installed:
152s   autopkgtest-satdep build-essential cpp cpp-14 cpp-14-s390x-linux-gnu
152s   cpp-s390x-linux-gnu dctrl-tools g++ g++-14 g++-14-s390x-linux-gnu
152s   g++-s390x-linux-gnu gcc gcc-14 gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu
152s   gfortran gfortran-14 gfortran-14-s390x-linux-gnu gfortran-s390x-linux-gnu
152s   icu-devtools libasan8 libatomic1 libblas-dev libbz2-dev libcc1-0
152s   libdeflate-dev libgcc-14-dev libgfortran-14-dev libicu-dev libisl23 libitm1
152s   libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblzma-dev
152s   libmpc3 libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev
152s   libpcre2-posix3 libpkgconf3 libpng-dev libreadline-dev libstdc++-14-dev
152s   libtirpc-dev libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev
152s   zlib1g-dev
152s 0 upgraded, 53 newly installed, 0 to remove and 0 not upgraded.
152s Need to get 81.8 MB/81.8 MB of archives.
152s After this operation, 276 MB of additional disk space will be used.
152s Get:1 /tmp/autopkgtest.ijhwM7/2-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [756 B]
152s Get:2 http://ftpmaster.internal/ubuntu oracular/main s390x libisl23 s390x 0.26-3build1 [713 kB]
152s Get:3 http://ftpmaster.internal/ubuntu oracular/main s390x libmpc3 s390x 1.3.1-1build1 [58.4 kB]
152s Get:4 http://ftpmaster.internal/ubuntu oracular/main s390x cpp-14-s390x-linux-gnu s390x 14.1.0-5ubuntu1 [9572 kB]
153s Get:5 http://ftpmaster.internal/ubuntu oracular/main s390x cpp-14 s390x 14.1.0-5ubuntu1 [1028 B]
153s Get:6 http://ftpmaster.internal/ubuntu oracular/main s390x cpp-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [5452 B]
153s Get:7 http://ftpmaster.internal/ubuntu oracular/main s390x cpp s390x 4:14.1.0-2ubuntu1 [22.4 kB]
153s Get:8 http://ftpmaster.internal/ubuntu oracular/main s390x libcc1-0 s390x 14.1.0-5ubuntu1 [50.6 kB]
153s Get:9 http://ftpmaster.internal/ubuntu oracular/main s390x libitm1 s390x 14.1.0-5ubuntu1 [30.9 kB]
153s Get:10 http://ftpmaster.internal/ubuntu oracular/main s390x libatomic1 s390x 14.1.0-5ubuntu1 [9432 B]
153s Get:11 http://ftpmaster.internal/ubuntu oracular/main s390x libasan8 s390x 14.1.0-5ubuntu1 [2965 kB]
153s Get:12 http://ftpmaster.internal/ubuntu oracular/main s390x libubsan1 s390x 14.1.0-5ubuntu1 [1184 kB]
153s Get:13 http://ftpmaster.internal/ubuntu oracular/main s390x libgcc-14-dev s390x 14.1.0-5ubuntu1 [1036 kB]
153s Get:14 http://ftpmaster.internal/ubuntu oracular/main s390x gcc-14-s390x-linux-gnu s390x 14.1.0-5ubuntu1 [18.7 MB]
153s Get:15 http://ftpmaster.internal/ubuntu oracular/main s390x gcc-14 s390x 14.1.0-5ubuntu1 [506 kB]
153s Get:16 http://ftpmaster.internal/ubuntu oracular/main s390x gcc-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [1204 B]
153s Get:17 http://ftpmaster.internal/ubuntu oracular/main s390x gcc s390x 4:14.1.0-2ubuntu1 [4996 B]
153s Get:18 http://ftpmaster.internal/ubuntu oracular/main s390x libstdc++-14-dev s390x 14.1.0-5ubuntu1 [2578 kB]
154s Get:19 http://ftpmaster.internal/ubuntu oracular/main s390x g++-14-s390x-linux-gnu s390x 14.1.0-5ubuntu1 [11.0 MB]
154s Get:20 http://ftpmaster.internal/ubuntu oracular/main s390x g++-14 s390x 14.1.0-5ubuntu1 [18.0 kB]
154s Get:21 http://ftpmaster.internal/ubuntu oracular/main s390x g++-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [956 B]
154s Get:22 http://ftpmaster.internal/ubuntu oracular/main s390x g++ s390x 4:14.1.0-2ubuntu1 [1076 B]
154s Get:23 http://ftpmaster.internal/ubuntu oracular/main s390x build-essential s390x 12.10ubuntu1 [4930 B]
154s Get:24 http://ftpmaster.internal/ubuntu oracular/main s390x dctrl-tools s390x 2.24-3build3 [106 kB]
154s Get:25 http://ftpmaster.internal/ubuntu oracular/main s390x libgfortran-14-dev s390x 14.1.0-5ubuntu1 [654 kB]
154s Get:26 http://ftpmaster.internal/ubuntu oracular/main s390x gfortran-14-s390x-linux-gnu s390x 14.1.0-5ubuntu1 [10.3 MB]
154s Get:27 http://ftpmaster.internal/ubuntu oracular/main s390x gfortran-14 s390x 14.1.0-5ubuntu1 [10.6 kB]
154s Get:28 http://ftpmaster.internal/ubuntu oracular/main s390x gfortran-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [1016 B]
154s Get:29 http://ftpmaster.internal/ubuntu oracular/main s390x gfortran s390x 4:14.1.0-2ubuntu1 [1160 B]
154s Get:30 http://ftpmaster.internal/ubuntu oracular/main s390x icu-devtools s390x 74.2-1ubuntu3 [223 kB]
154s Get:31 http://ftpmaster.internal/ubuntu oracular/main s390x libblas-dev s390x 3.12.0-3build1 [239 kB]
154s Get:32 http://ftpmaster.internal/ubuntu oracular/main s390x libbz2-dev s390x 1.0.8-5.1 [39.4 kB]
154s Get:33 http://ftpmaster.internal/ubuntu oracular/main s390x libdeflate-dev s390x 1.20-1 [52.1 kB]
154s Get:34 http://ftpmaster.internal/ubuntu oracular/main s390x libicu-dev s390x 74.2-1ubuntu3 [11.9 MB]
155s Get:35 http://ftpmaster.internal/ubuntu oracular/main s390x libjpeg-turbo8-dev s390x 2.1.5-2ubuntu2 [284 kB]
155s Get:36 http://ftpmaster.internal/ubuntu oracular/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B]
155s Get:37 http://ftpmaster.internal/ubuntu oracular/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B]
155s Get:38 http://ftpmaster.internal/ubuntu oracular/main s390x liblapack-dev s390x 3.12.0-3build1 [5983 kB]
155s Get:39 http://ftpmaster.internal/ubuntu oracular/main s390x libncurses-dev s390x 6.5-2 [404 kB]
155s Get:40 http://ftpmaster.internal/ubuntu oracular/main s390x libpcre2-16-0 s390x 10.42-4ubuntu2 [233 kB]
155s Get:41 http://ftpmaster.internal/ubuntu oracular/main s390x libpcre2-32-0 s390x 10.42-4ubuntu2 [219 kB]
155s Get:42 http://ftpmaster.internal/ubuntu oracular/main s390x libpcre2-posix3 s390x 10.42-4ubuntu2 [6752 B]
155s Get:43 http://ftpmaster.internal/ubuntu oracular/main s390x libpcre2-dev s390x 10.42-4ubuntu2 [809 kB]
155s Get:44 http://ftpmaster.internal/ubuntu oracular/main s390x libpkgconf3 s390x 1.8.1-3 [30.8 kB]
155s Get:45 http://ftpmaster.internal/ubuntu oracular/main s390x zlib1g-dev s390x 1:1.3.dfsg-3.1ubuntu2 [904 kB]
155s Get:46 http://ftpmaster.internal/ubuntu oracular/main s390x libpng-dev s390x 1.6.43-5build1 [277 kB]
155s Get:47 http://ftpmaster.internal/ubuntu oracular/main s390x libreadline-dev s390x 8.2-4build1 [189 kB]
155s Get:48 http://ftpmaster.internal/ubuntu oracular/main s390x liblzma-dev s390x 5.6.2-2 [183 kB]
155s Get:49 http://ftpmaster.internal/ubuntu oracular/main s390x pkgconf-bin s390x 1.8.1-3 [21.4 kB]
155s Get:50 http://ftpmaster.internal/ubuntu oracular/main s390x pkgconf s390x 1.8.1-3 [16.8 kB]
155s Get:51 http://ftpmaster.internal/ubuntu oracular/main s390x libtirpc-dev s390x 1.3.4+ds-1.3 [196 kB]
155s Get:52 http://ftpmaster.internal/ubuntu oracular/universe s390x r-base-dev all 4.4.1-1 [4338 B]
155s Get:53 http://ftpmaster.internal/ubuntu oracular/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
155s Fetched 81.8 MB in 3s (24.2 MB/s)
155s Selecting previously unselected package libisl23:s390x.
156s (Reading database ... 
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156s Preparing to unpack .../00-libisl23_0.26-3build1_s390x.deb ...
156s Unpacking libisl23:s390x (0.26-3build1) ...
156s Selecting previously unselected package libmpc3:s390x.
156s Preparing to unpack .../01-libmpc3_1.3.1-1build1_s390x.deb ...
156s Unpacking libmpc3:s390x (1.3.1-1build1) ...
156s Selecting previously unselected package cpp-14-s390x-linux-gnu.
156s Preparing to unpack .../02-cpp-14-s390x-linux-gnu_14.1.0-5ubuntu1_s390x.deb ...
156s Unpacking cpp-14-s390x-linux-gnu (14.1.0-5ubuntu1) ...
156s Selecting previously unselected package cpp-14.
156s Preparing to unpack .../03-cpp-14_14.1.0-5ubuntu1_s390x.deb ...
156s Unpacking cpp-14 (14.1.0-5ubuntu1) ...
156s Selecting previously unselected package cpp-s390x-linux-gnu.
156s Preparing to unpack .../04-cpp-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ...
156s Unpacking cpp-s390x-linux-gnu (4:14.1.0-2ubuntu1) ...
156s Selecting previously unselected package cpp.
156s Preparing to unpack .../05-cpp_4%3a14.1.0-2ubuntu1_s390x.deb ...
156s Unpacking cpp (4:14.1.0-2ubuntu1) ...
156s Selecting previously unselected package libcc1-0:s390x.
156s Preparing to unpack .../06-libcc1-0_14.1.0-5ubuntu1_s390x.deb ...
156s Unpacking libcc1-0:s390x (14.1.0-5ubuntu1) ...
156s Selecting previously unselected package libitm1:s390x.
156s Preparing to unpack .../07-libitm1_14.1.0-5ubuntu1_s390x.deb ...
156s Unpacking libitm1:s390x (14.1.0-5ubuntu1) ...
156s Selecting previously unselected package libatomic1:s390x.
156s Preparing to unpack .../08-libatomic1_14.1.0-5ubuntu1_s390x.deb ...
156s Unpacking libatomic1:s390x (14.1.0-5ubuntu1) ...
156s Selecting previously unselected package libasan8:s390x.
156s Preparing to unpack .../09-libasan8_14.1.0-5ubuntu1_s390x.deb ...
156s Unpacking libasan8:s390x (14.1.0-5ubuntu1) ...
156s Selecting previously unselected package libubsan1:s390x.
156s Preparing to unpack .../10-libubsan1_14.1.0-5ubuntu1_s390x.deb ...
156s Unpacking libubsan1:s390x (14.1.0-5ubuntu1) ...
156s Selecting previously unselected package libgcc-14-dev:s390x.
156s Preparing to unpack .../11-libgcc-14-dev_14.1.0-5ubuntu1_s390x.deb ...
156s Unpacking libgcc-14-dev:s390x (14.1.0-5ubuntu1) ...
156s Selecting previously unselected package gcc-14-s390x-linux-gnu.
156s Preparing to unpack .../12-gcc-14-s390x-linux-gnu_14.1.0-5ubuntu1_s390x.deb ...
156s Unpacking gcc-14-s390x-linux-gnu (14.1.0-5ubuntu1) ...
157s Selecting previously unselected package gcc-14.
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157s Unpacking gcc-14 (14.1.0-5ubuntu1) ...
157s Selecting previously unselected package gcc-s390x-linux-gnu.
157s Preparing to unpack .../14-gcc-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ...
157s Unpacking gcc-s390x-linux-gnu (4:14.1.0-2ubuntu1) ...
157s Selecting previously unselected package gcc.
157s Preparing to unpack .../15-gcc_4%3a14.1.0-2ubuntu1_s390x.deb ...
157s Unpacking gcc (4:14.1.0-2ubuntu1) ...
157s Selecting previously unselected package libstdc++-14-dev:s390x.
157s Preparing to unpack .../16-libstdc++-14-dev_14.1.0-5ubuntu1_s390x.deb ...
157s Unpacking libstdc++-14-dev:s390x (14.1.0-5ubuntu1) ...
157s Selecting previously unselected package g++-14-s390x-linux-gnu.
157s Preparing to unpack .../17-g++-14-s390x-linux-gnu_14.1.0-5ubuntu1_s390x.deb ...
157s Unpacking g++-14-s390x-linux-gnu (14.1.0-5ubuntu1) ...
157s Selecting previously unselected package g++-14.
157s Preparing to unpack .../18-g++-14_14.1.0-5ubuntu1_s390x.deb ...
157s Unpacking g++-14 (14.1.0-5ubuntu1) ...
157s Selecting previously unselected package g++-s390x-linux-gnu.
157s Preparing to unpack .../19-g++-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ...
157s Unpacking g++-s390x-linux-gnu (4:14.1.0-2ubuntu1) ...
157s Selecting previously unselected package g++.
157s Preparing to unpack .../20-g++_4%3a14.1.0-2ubuntu1_s390x.deb ...
157s Unpacking g++ (4:14.1.0-2ubuntu1) ...
157s Selecting previously unselected package build-essential.
157s Preparing to unpack .../21-build-essential_12.10ubuntu1_s390x.deb ...
157s Unpacking build-essential (12.10ubuntu1) ...
157s Selecting previously unselected package dctrl-tools.
157s Preparing to unpack .../22-dctrl-tools_2.24-3build3_s390x.deb ...
157s Unpacking dctrl-tools (2.24-3build3) ...
157s Selecting previously unselected package libgfortran-14-dev:s390x.
157s Preparing to unpack .../23-libgfortran-14-dev_14.1.0-5ubuntu1_s390x.deb ...
157s Unpacking libgfortran-14-dev:s390x (14.1.0-5ubuntu1) ...
157s Selecting previously unselected package gfortran-14-s390x-linux-gnu.
157s Preparing to unpack .../24-gfortran-14-s390x-linux-gnu_14.1.0-5ubuntu1_s390x.deb ...
157s Unpacking gfortran-14-s390x-linux-gnu (14.1.0-5ubuntu1) ...
158s Selecting previously unselected package gfortran-14.
158s Preparing to unpack .../25-gfortran-14_14.1.0-5ubuntu1_s390x.deb ...
158s Unpacking gfortran-14 (14.1.0-5ubuntu1) ...
158s Selecting previously unselected package gfortran-s390x-linux-gnu.
158s Preparing to unpack .../26-gfortran-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ...
158s Unpacking gfortran-s390x-linux-gnu (4:14.1.0-2ubuntu1) ...
158s Selecting previously unselected package gfortran.
158s Preparing to unpack .../27-gfortran_4%3a14.1.0-2ubuntu1_s390x.deb ...
158s Unpacking gfortran (4:14.1.0-2ubuntu1) ...
158s Selecting previously unselected package icu-devtools.
158s Preparing to unpack .../28-icu-devtools_74.2-1ubuntu3_s390x.deb ...
158s Unpacking icu-devtools (74.2-1ubuntu3) ...
158s Selecting previously unselected package libblas-dev:s390x.
158s Preparing to unpack .../29-libblas-dev_3.12.0-3build1_s390x.deb ...
158s Unpacking libblas-dev:s390x (3.12.0-3build1) ...
158s Selecting previously unselected package libbz2-dev:s390x.
158s Preparing to unpack .../30-libbz2-dev_1.0.8-5.1_s390x.deb ...
158s Unpacking libbz2-dev:s390x (1.0.8-5.1) ...
158s Selecting previously unselected package libdeflate-dev:s390x.
158s Preparing to unpack .../31-libdeflate-dev_1.20-1_s390x.deb ...
158s Unpacking libdeflate-dev:s390x (1.20-1) ...
158s Selecting previously unselected package libicu-dev:s390x.
158s Preparing to unpack .../32-libicu-dev_74.2-1ubuntu3_s390x.deb ...
158s Unpacking libicu-dev:s390x (74.2-1ubuntu3) ...
158s Selecting previously unselected package libjpeg-turbo8-dev:s390x.
158s Preparing to unpack .../33-libjpeg-turbo8-dev_2.1.5-2ubuntu2_s390x.deb ...
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158s Selecting previously unselected package libjpeg8-dev:s390x.
158s Preparing to unpack .../34-libjpeg8-dev_8c-2ubuntu11_s390x.deb ...
158s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ...
158s Selecting previously unselected package libjpeg-dev:s390x.
158s Preparing to unpack .../35-libjpeg-dev_8c-2ubuntu11_s390x.deb ...
158s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ...
158s Selecting previously unselected package liblapack-dev:s390x.
158s Preparing to unpack .../36-liblapack-dev_3.12.0-3build1_s390x.deb ...
158s Unpacking liblapack-dev:s390x (3.12.0-3build1) ...
158s Selecting previously unselected package libncurses-dev:s390x.
158s Preparing to unpack .../37-libncurses-dev_6.5-2_s390x.deb ...
158s Unpacking libncurses-dev:s390x (6.5-2) ...
158s Selecting previously unselected package libpcre2-16-0:s390x.
158s Preparing to unpack .../38-libpcre2-16-0_10.42-4ubuntu2_s390x.deb ...
158s Unpacking libpcre2-16-0:s390x (10.42-4ubuntu2) ...
158s Selecting previously unselected package libpcre2-32-0:s390x.
158s Preparing to unpack .../39-libpcre2-32-0_10.42-4ubuntu2_s390x.deb ...
158s Unpacking libpcre2-32-0:s390x (10.42-4ubuntu2) ...
158s Selecting previously unselected package libpcre2-posix3:s390x.
158s Preparing to unpack .../40-libpcre2-posix3_10.42-4ubuntu2_s390x.deb ...
158s Unpacking libpcre2-posix3:s390x (10.42-4ubuntu2) ...
158s Selecting previously unselected package libpcre2-dev:s390x.
158s Preparing to unpack .../41-libpcre2-dev_10.42-4ubuntu2_s390x.deb ...
158s Unpacking libpcre2-dev:s390x (10.42-4ubuntu2) ...
158s Selecting previously unselected package libpkgconf3:s390x.
158s Preparing to unpack .../42-libpkgconf3_1.8.1-3_s390x.deb ...
158s Unpacking libpkgconf3:s390x (1.8.1-3) ...
158s Selecting previously unselected package zlib1g-dev:s390x.
158s Preparing to unpack .../43-zlib1g-dev_1%3a1.3.dfsg-3.1ubuntu2_s390x.deb ...
158s Unpacking zlib1g-dev:s390x (1:1.3.dfsg-3.1ubuntu2) ...
159s Selecting previously unselected package libpng-dev:s390x.
159s Preparing to unpack .../44-libpng-dev_1.6.43-5build1_s390x.deb ...
159s Unpacking libpng-dev:s390x (1.6.43-5build1) ...
159s Selecting previously unselected package libreadline-dev:s390x.
159s Preparing to unpack .../45-libreadline-dev_8.2-4build1_s390x.deb ...
159s Unpacking libreadline-dev:s390x (8.2-4build1) ...
159s Selecting previously unselected package liblzma-dev:s390x.
159s Preparing to unpack .../46-liblzma-dev_5.6.2-2_s390x.deb ...
159s Unpacking liblzma-dev:s390x (5.6.2-2) ...
159s Selecting previously unselected package pkgconf-bin.
159s Preparing to unpack .../47-pkgconf-bin_1.8.1-3_s390x.deb ...
159s Unpacking pkgconf-bin (1.8.1-3) ...
159s Selecting previously unselected package pkgconf:s390x.
159s Preparing to unpack .../48-pkgconf_1.8.1-3_s390x.deb ...
159s Unpacking pkgconf:s390x (1.8.1-3) ...
159s Selecting previously unselected package libtirpc-dev:s390x.
159s Preparing to unpack .../49-libtirpc-dev_1.3.4+ds-1.3_s390x.deb ...
159s Unpacking libtirpc-dev:s390x (1.3.4+ds-1.3) ...
159s Selecting previously unselected package r-base-dev.
159s Preparing to unpack .../50-r-base-dev_4.4.1-1_all.deb ...
159s Unpacking r-base-dev (4.4.1-1) ...
159s Selecting previously unselected package pkg-r-autopkgtest.
159s Preparing to unpack .../51-pkg-r-autopkgtest_20231212ubuntu1_all.deb ...
159s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ...
159s Selecting previously unselected package autopkgtest-satdep.
159s Preparing to unpack .../52-2-autopkgtest-satdep.deb ...
159s Unpacking autopkgtest-satdep (0) ...
159s Setting up libjpeg-turbo8-dev:s390x (2.1.5-2ubuntu2) ...
159s Setting up libncurses-dev:s390x (6.5-2) ...
159s Setting up libreadline-dev:s390x (8.2-4build1) ...
159s Setting up libpcre2-16-0:s390x (10.42-4ubuntu2) ...
159s Setting up libpcre2-32-0:s390x (10.42-4ubuntu2) ...
159s Setting up libtirpc-dev:s390x (1.3.4+ds-1.3) ...
159s Setting up libpkgconf3:s390x (1.8.1-3) ...
159s Setting up libmpc3:s390x (1.3.1-1build1) ...
159s Setting up libatomic1:s390x (14.1.0-5ubuntu1) ...
159s Setting up icu-devtools (74.2-1ubuntu3) ...
159s Setting up pkgconf-bin (1.8.1-3) ...
159s Setting up liblzma-dev:s390x (5.6.2-2) ...
159s Setting up libubsan1:s390x (14.1.0-5ubuntu1) ...
159s Setting up zlib1g-dev:s390x (1:1.3.dfsg-3.1ubuntu2) ...
159s Setting up libpcre2-posix3:s390x (10.42-4ubuntu2) ...
159s Setting up libasan8:s390x (14.1.0-5ubuntu1) ...
159s Setting up libjpeg8-dev:s390x (8c-2ubuntu11) ...
159s Setting up libisl23:s390x (0.26-3build1) ...
159s Setting up libdeflate-dev:s390x (1.20-1) ...
159s Setting up libicu-dev:s390x (74.2-1ubuntu3) ...
159s Setting up libcc1-0:s390x (14.1.0-5ubuntu1) ...
159s Setting up libblas-dev:s390x (3.12.0-3build1) ...
159s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so to provide /usr/lib/s390x-linux-gnu/libblas.so (libblas.so-s390x-linux-gnu) in auto mode
159s Setting up dctrl-tools (2.24-3build3) ...
159s Setting up libitm1:s390x (14.1.0-5ubuntu1) ...
159s Setting up libbz2-dev:s390x (1.0.8-5.1) ...
159s Setting up libpcre2-dev:s390x (10.42-4ubuntu2) ...
159s Setting up libpng-dev:s390x (1.6.43-5build1) ...
159s Setting up libjpeg-dev:s390x (8c-2ubuntu11) ...
159s Setting up pkgconf:s390x (1.8.1-3) ...
159s Setting up liblapack-dev:s390x (3.12.0-3build1) ...
159s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so to provide /usr/lib/s390x-linux-gnu/liblapack.so (liblapack.so-s390x-linux-gnu) in auto mode
159s Setting up cpp-14-s390x-linux-gnu (14.1.0-5ubuntu1) ...
159s Setting up cpp-14 (14.1.0-5ubuntu1) ...
159s Setting up libgcc-14-dev:s390x (14.1.0-5ubuntu1) ...
159s Setting up libstdc++-14-dev:s390x (14.1.0-5ubuntu1) ...
159s Setting up libgfortran-14-dev:s390x (14.1.0-5ubuntu1) ...
159s Setting up cpp-s390x-linux-gnu (4:14.1.0-2ubuntu1) ...
159s Setting up gcc-14-s390x-linux-gnu (14.1.0-5ubuntu1) ...
159s Setting up gcc-s390x-linux-gnu (4:14.1.0-2ubuntu1) ...
159s Setting up g++-14-s390x-linux-gnu (14.1.0-5ubuntu1) ...
159s Setting up cpp (4:14.1.0-2ubuntu1) ...
159s Setting up gfortran-14-s390x-linux-gnu (14.1.0-5ubuntu1) ...
159s Setting up g++-s390x-linux-gnu (4:14.1.0-2ubuntu1) ...
159s Setting up gcc-14 (14.1.0-5ubuntu1) ...
159s Setting up g++-14 (14.1.0-5ubuntu1) ...
159s Setting up gfortran-14 (14.1.0-5ubuntu1) ...
159s Setting up gfortran-s390x-linux-gnu (4:14.1.0-2ubuntu1) ...
159s Setting up gcc (4:14.1.0-2ubuntu1) ...
159s Setting up g++ (4:14.1.0-2ubuntu1) ...
159s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
159s Setting up build-essential (12.10ubuntu1) ...
159s Setting up gfortran (4:14.1.0-2ubuntu1) ...
159s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
159s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
159s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
159s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
159s Setting up r-base-dev (4.4.1-1) ...
159s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
159s Setting up autopkgtest-satdep (0) ...
159s Processing triggers for man-db (2.12.1-2) ...
160s Processing triggers for install-info (7.1-3build2) ...
160s Processing triggers for libc-bin (2.39-0ubuntu9) ...
162s (Reading database ... 68105 files and directories currently installed.)
162s Removing autopkgtest-satdep (0) ...
163s autopkgtest [16:11:26]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
163s autopkgtest [16:11:26]: test pkg-r-autopkgtest: [-----------------------
163s Test: Try to load the R library gbm
163s 
163s R version 4.4.1 (2024-06-14) -- "Race for Your Life"
163s Copyright (C) 2024 The R Foundation for Statistical Computing
163s Platform: s390x-ibm-linux-gnu
163s 
163s R is free software and comes with ABSOLUTELY NO WARRANTY.
163s You are welcome to redistribute it under certain conditions.
163s Type 'license()' or 'licence()' for distribution details.
163s 
163s R is a collaborative project with many contributors.
163s Type 'contributors()' for more information and
163s 'citation()' on how to cite R or R packages in publications.
163s 
163s Type 'demo()' for some demos, 'help()' for on-line help, or
163s 'help.start()' for an HTML browser interface to help.
163s Type 'q()' to quit R.
163s 
163s > library('gbm')
164s > 
164s > 
164s Loaded gbm 2.1.9
164s This version of gbm is no longer under development. Consider transitioning to gbm3, https://github.com/gbm-developers/gbm3
164s Other tests are currently unsupported!
164s They will be progressively added.
165s autopkgtest [16:11:28]: test pkg-r-autopkgtest: -----------------------]
165s pkg-r-autopkgtest    PASS
165s autopkgtest [16:11:28]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
165s autopkgtest [16:11:28]: @@@@@@@@@@@@@@@@@@@@ summary
165s run-unit-test        FAIL non-zero exit status 1
165s pkg-r-autopkgtest    PASS
178s nova [W] Using flock in scalingstack-bos01-s390x
178s Creating nova instance adt-oracular-s390x-r-cran-gbm-20240726-160843-juju-7f2275-prod-proposed-migration-environment-3-6bea9fc7-21b9-443d-aa6f-8634215da552 from image adt/ubuntu-oracular-s390x-server-20240726.img (UUID dfbcf47e-ed98-4bf2-ad84-36ab9700c5bd)...