0s autopkgtest [10:57:51]: starting date and time: 2024-06-16 10:57:51+0000 0s autopkgtest [10:57:51]: git checkout: 433ed4cb Merge branch 'skia/nova_flock' into 'ubuntu/5.34+prod' 0s autopkgtest [10:57:51]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.l89flmr7/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:orthanc,src:dcmtk --apt-upgrade orthanc-wsi --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=orthanc/1.12.4+dfsg-1 dcmtk/3.6.7-14' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-s390x-22.secgroup --name adt-oracular-s390x-orthanc-wsi-20240616-102129-juju-7f2275-prod-proposed-migration-environment-2-768e2416-f3da-4c98-a01a-4efaa8ab8456 --image adt/ubuntu-oracular-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 76s autopkgtest [10:59:07]: testbed dpkg architecture: s390x 76s autopkgtest [10:59:07]: testbed apt version: 2.9.5 76s autopkgtest [10:59:07]: @@@@@@@@@@@@@@@@@@@@ test bed setup 77s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [110 kB] 77s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [7052 B] 77s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [36.1 kB] 77s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [389 kB] 77s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [2576 B] 77s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main s390x Packages [43.9 kB] 77s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/restricted s390x Packages [1860 B] 77s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/universe s390x Packages [298 kB] 77s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse s390x Packages [2528 B] 77s Fetched 892 kB in 1s (1167 kB/s) 77s Reading package lists... 79s Reading package lists... 80s Building dependency tree... 80s Reading state information... 80s Calculating upgrade... 80s The following packages will be upgraded: 80s libldap-common libldap2 80s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 80s Need to get 230 kB of archives. 80s After this operation, 16.4 kB disk space will be freed. 80s Get:1 http://ftpmaster.internal/ubuntu oracular/main s390x libldap-common all 2.6.7+dfsg-1~exp1ubuntu9 [31.5 kB] 80s Get:2 http://ftpmaster.internal/ubuntu oracular/main s390x libldap2 s390x 2.6.7+dfsg-1~exp1ubuntu9 [199 kB] 81s Fetched 230 kB in 0s (561 kB/s) 81s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 54671 files and directories currently installed.) 81s Preparing to unpack .../libldap-common_2.6.7+dfsg-1~exp1ubuntu9_all.deb ... 81s Unpacking libldap-common (2.6.7+dfsg-1~exp1ubuntu9) over (2.6.7+dfsg-1~exp1ubuntu8) ... 81s Preparing to unpack .../libldap2_2.6.7+dfsg-1~exp1ubuntu9_s390x.deb ... 81s Unpacking libldap2:s390x (2.6.7+dfsg-1~exp1ubuntu9) over (2.6.7+dfsg-1~exp1ubuntu8) ... 81s Setting up libldap-common (2.6.7+dfsg-1~exp1ubuntu9) ... 81s Setting up libldap2:s390x (2.6.7+dfsg-1~exp1ubuntu9) ... 81s Processing triggers for man-db (2.12.1-2) ... 81s Processing triggers for libc-bin (2.39-0ubuntu9) ... 81s Reading package lists... 81s Building dependency tree... 81s Reading state information... 81s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 82s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 82s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease 82s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 82s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 83s Reading package lists... 83s Reading package lists... 83s Building dependency tree... 83s Reading state information... 83s Calculating upgrade... 83s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 83s Reading package lists... 83s Building dependency tree... 83s Reading state information... 84s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 86s autopkgtest [10:59:17]: testbed running kernel: Linux 6.8.0-31-generic #31-Ubuntu SMP Sat Apr 20 00:14:26 UTC 2024 86s autopkgtest [10:59:17]: @@@@@@@@@@@@@@@@@@@@ apt-source orthanc-wsi 88s Get:1 http://ftpmaster.internal/ubuntu oracular/universe orthanc-wsi 2.0+dfsg-2build5 (dsc) [2677 B] 88s Get:2 http://ftpmaster.internal/ubuntu oracular/universe orthanc-wsi 2.0+dfsg-2build5 (tar) [1764 kB] 88s Get:3 http://ftpmaster.internal/ubuntu oracular/universe orthanc-wsi 2.0+dfsg-2build5 (tar) [136 kB] 88s Get:4 http://ftpmaster.internal/ubuntu oracular/universe orthanc-wsi 2.0+dfsg-2build5 (diff) [318 kB] 88s gpgv: Signature made Mon Apr 1 07:06:48 2024 UTC 88s gpgv: using RSA key A089FB36AAFBDAD5ACC1325069F790171A210984 88s gpgv: Can't check signature: No public key 88s dpkg-source: warning: cannot verify inline signature for ./orthanc-wsi_2.0+dfsg-2build5.dsc: no acceptable signature found 88s autopkgtest [10:59:19]: testing package orthanc-wsi version 2.0+dfsg-2build5 89s autopkgtest [10:59:20]: build not needed 90s autopkgtest [10:59:21]: test run-generate-dataset-test: preparing testbed 91s Reading package lists... 91s Building dependency tree... 91s Reading state information... 91s Starting pkgProblemResolver with broken count: 0 91s Starting 2 pkgProblemResolver with broken count: 0 91s Done 92s The following additional packages will be installed: 92s dcmtk libboost-filesystem1.83.0 libboost-iostreams1.83.0 92s libboost-locale1.83.0 libboost-program-options1.83.0 libboost-thread1.83.0 92s libcivetweb1 libdcmtk17t64 libjsoncpp25 liblua5.3-0 libopenjp2-7 92s libprotobuf32t64 libpugixml1v5 libssl-dev orthanc orthanc-wsi 92s Suggested packages: 92s libssl-doc 92s Recommended packages: 92s libopenslide0 92s The following NEW packages will be installed: 92s autopkgtest-satdep dcmtk libboost-filesystem1.83.0 libboost-iostreams1.83.0 92s libboost-locale1.83.0 libboost-program-options1.83.0 libboost-thread1.83.0 92s libcivetweb1 libdcmtk17t64 libjsoncpp25 liblua5.3-0 libopenjp2-7 92s libprotobuf32t64 libpugixml1v5 libssl-dev orthanc orthanc-wsi 92s 0 upgraded, 17 newly installed, 0 to remove and 0 not upgraded. 92s Need to get 14.5 MB/14.5 MB of archives. 92s After this operation, 68.6 MB of additional disk space will be used. 92s Get:1 /tmp/autopkgtest.TNRCdm/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [708 B] 92s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/universe s390x libdcmtk17t64 s390x 3.6.7-14 [5339 kB] 92s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/universe s390x dcmtk s390x 3.6.7-14 [931 kB] 92s Get:4 http://ftpmaster.internal/ubuntu oracular/universe s390x libcivetweb1 s390x 1.16+dfsg-1build1 [101 kB] 92s Get:5 http://ftpmaster.internal/ubuntu oracular/main s390x libssl-dev s390x 3.0.13-0ubuntu4 [2110 kB] 92s Get:6 http://ftpmaster.internal/ubuntu oracular/main s390x libboost-filesystem1.83.0 s390x 1.83.0-3ubuntu1 [286 kB] 92s Get:7 http://ftpmaster.internal/ubuntu oracular/main s390x libboost-iostreams1.83.0 s390x 1.83.0-3ubuntu1 [258 kB] 92s Get:8 http://ftpmaster.internal/ubuntu oracular/main s390x libboost-thread1.83.0 s390x 1.83.0-3ubuntu1 [278 kB] 92s Get:9 http://ftpmaster.internal/ubuntu oracular/main s390x libboost-locale1.83.0 s390x 1.83.0-3ubuntu1 [424 kB] 92s Get:10 http://ftpmaster.internal/ubuntu oracular/main s390x libjsoncpp25 s390x 1.9.5-6build1 [82.5 kB] 92s Get:11 http://ftpmaster.internal/ubuntu oracular/universe s390x liblua5.3-0 s390x 5.3.6-2build2 [155 kB] 92s Get:12 http://ftpmaster.internal/ubuntu oracular/main s390x libprotobuf32t64 s390x 3.21.12-8.2build1 [953 kB] 92s Get:13 http://ftpmaster.internal/ubuntu oracular/universe s390x libpugixml1v5 s390x 1.14-0.1build1 [99.0 kB] 92s Get:14 http://ftpmaster.internal/ubuntu oracular-proposed/universe s390x orthanc s390x 1.12.4+dfsg-1 [1968 kB] 93s Get:15 http://ftpmaster.internal/ubuntu oracular/main s390x libboost-program-options1.83.0 s390x 1.83.0-3ubuntu1 [323 kB] 93s Get:16 http://ftpmaster.internal/ubuntu oracular/main s390x libopenjp2-7 s390x 2.5.0-2build3 [192 kB] 93s Get:17 http://ftpmaster.internal/ubuntu oracular/universe s390x orthanc-wsi s390x 2.0+dfsg-2build5 [1016 kB] 93s Fetched 14.5 MB in 1s (14.2 MB/s) 93s Selecting previously unselected package libdcmtk17t64:s390x. 93s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 54671 files and directories currently installed.) 93s Preparing to unpack .../00-libdcmtk17t64_3.6.7-14_s390x.deb ... 93s Unpacking libdcmtk17t64:s390x (3.6.7-14) ... 93s Selecting previously unselected package dcmtk. 93s Preparing to unpack .../01-dcmtk_3.6.7-14_s390x.deb ... 93s Unpacking dcmtk (3.6.7-14) ... 93s Selecting previously unselected package libcivetweb1:s390x. 93s Preparing to unpack .../02-libcivetweb1_1.16+dfsg-1build1_s390x.deb ... 93s Unpacking libcivetweb1:s390x (1.16+dfsg-1build1) ... 93s Selecting previously unselected package libssl-dev:s390x. 93s Preparing to unpack .../03-libssl-dev_3.0.13-0ubuntu4_s390x.deb ... 93s Unpacking libssl-dev:s390x (3.0.13-0ubuntu4) ... 93s Selecting previously unselected package libboost-filesystem1.83.0:s390x. 93s Preparing to unpack .../04-libboost-filesystem1.83.0_1.83.0-3ubuntu1_s390x.deb ... 93s Unpacking libboost-filesystem1.83.0:s390x (1.83.0-3ubuntu1) ... 93s Selecting previously unselected package libboost-iostreams1.83.0:s390x. 93s Preparing to unpack .../05-libboost-iostreams1.83.0_1.83.0-3ubuntu1_s390x.deb ... 93s Unpacking libboost-iostreams1.83.0:s390x (1.83.0-3ubuntu1) ... 93s Selecting previously unselected package libboost-thread1.83.0:s390x. 93s Preparing to unpack .../06-libboost-thread1.83.0_1.83.0-3ubuntu1_s390x.deb ... 93s Unpacking libboost-thread1.83.0:s390x (1.83.0-3ubuntu1) ... 93s Selecting previously unselected package libboost-locale1.83.0:s390x. 93s Preparing to unpack .../07-libboost-locale1.83.0_1.83.0-3ubuntu1_s390x.deb ... 93s Unpacking libboost-locale1.83.0:s390x (1.83.0-3ubuntu1) ... 93s Selecting previously unselected package libjsoncpp25:s390x. 93s Preparing to unpack .../08-libjsoncpp25_1.9.5-6build1_s390x.deb ... 93s Unpacking libjsoncpp25:s390x (1.9.5-6build1) ... 93s Selecting previously unselected package liblua5.3-0:s390x. 93s Preparing to unpack .../09-liblua5.3-0_5.3.6-2build2_s390x.deb ... 93s Unpacking liblua5.3-0:s390x (5.3.6-2build2) ... 93s Selecting previously unselected package libprotobuf32t64:s390x. 93s Preparing to unpack .../10-libprotobuf32t64_3.21.12-8.2build1_s390x.deb ... 93s Unpacking libprotobuf32t64:s390x (3.21.12-8.2build1) ... 93s Selecting previously unselected package libpugixml1v5:s390x. 93s Preparing to unpack .../11-libpugixml1v5_1.14-0.1build1_s390x.deb ... 93s Unpacking libpugixml1v5:s390x (1.14-0.1build1) ... 93s Selecting previously unselected package orthanc. 93s Preparing to unpack .../12-orthanc_1.12.4+dfsg-1_s390x.deb ... 93s Unpacking orthanc (1.12.4+dfsg-1) ... 93s Selecting previously unselected package libboost-program-options1.83.0:s390x. 93s Preparing to unpack .../13-libboost-program-options1.83.0_1.83.0-3ubuntu1_s390x.deb ... 93s Unpacking libboost-program-options1.83.0:s390x (1.83.0-3ubuntu1) ... 94s Selecting previously unselected package libopenjp2-7:s390x. 94s Preparing to unpack .../14-libopenjp2-7_2.5.0-2build3_s390x.deb ... 94s Unpacking libopenjp2-7:s390x (2.5.0-2build3) ... 94s Selecting previously unselected package orthanc-wsi. 94s Preparing to unpack .../15-orthanc-wsi_2.0+dfsg-2build5_s390x.deb ... 94s Unpacking orthanc-wsi (2.0+dfsg-2build5) ... 94s Selecting previously unselected package autopkgtest-satdep. 94s Preparing to unpack .../16-1-autopkgtest-satdep.deb ... 94s Unpacking autopkgtest-satdep (0) ... 94s Setting up libboost-program-options1.83.0:s390x (1.83.0-3ubuntu1) ... 94s Setting up libcivetweb1:s390x (1.16+dfsg-1build1) ... 94s Setting up libprotobuf32t64:s390x (3.21.12-8.2build1) ... 94s Setting up libdcmtk17t64:s390x (3.6.7-14) ... 94s Setting up libboost-thread1.83.0:s390x (1.83.0-3ubuntu1) ... 94s Setting up libboost-filesystem1.83.0:s390x (1.83.0-3ubuntu1) ... 94s Setting up libpugixml1v5:s390x (1.14-0.1build1) ... 94s Setting up libboost-iostreams1.83.0:s390x (1.83.0-3ubuntu1) ... 94s Setting up libssl-dev:s390x (3.0.13-0ubuntu4) ... 94s Setting up libjsoncpp25:s390x (1.9.5-6build1) ... 94s Setting up dcmtk (3.6.7-14) ... 94s Adding `dcmtk' group to system ... 94s Adding `dcmtk' user to system ... 94s warn: The home directory `/var/lib/dcmtk/db' already exists. Not touching this directory. 94s warn: Warning: The home directory `/var/lib/dcmtk/db' does not belong to the user you are currently creating. 94s Setting up liblua5.3-0:s390x (5.3.6-2build2) ... 94s Setting up libopenjp2-7:s390x (2.5.0-2build3) ... 94s Setting up libboost-locale1.83.0:s390x (1.83.0-3ubuntu1) ... 94s Setting up orthanc-wsi (2.0+dfsg-2build5) ... 94s Setting up orthanc (1.12.4+dfsg-1) ... 94s Generating locales (this might take a while)... 96s en_US.UTF-8... done 96s Generation complete. 96s Created symlink /etc/systemd/system/multi-user.target.wants/orthanc.service → /usr/lib/systemd/system/orthanc.service. 96s Setting up autopkgtest-satdep (0) ... 96s Processing triggers for man-db (2.12.1-2) ... 97s Processing triggers for libc-bin (2.39-0ubuntu9) ... 99s (Reading database ... 55166 files and directories currently installed.) 99s Removing autopkgtest-satdep (0) ... 99s autopkgtest [10:59:30]: test run-generate-dataset-test: [----------------------- 100s W0616 10:59:31.049844 3ff96c589e0 FromDcmtkBridge.cpp:382] Loading external DICOM dictionary: "/usr/share/libdcmtk17/dicom.dic" 100s W0616 10:59:31.061499 3ff96c589e0 ApplicationToolbox.cpp:251] Orthanc WSI version: 2.0 100s dataset.json exists, proceeding to remove it... 100s dataset.json removed successfully. 100s autopkgtest [10:59:31]: test run-generate-dataset-test: -----------------------] 100s autopkgtest [10:59:31]: test run-generate-dataset-test: - - - - - - - - - - results - - - - - - - - - - 100s run-generate-dataset-test PASS 101s autopkgtest [10:59:32]: test run-dicom-image-transcode-test: preparing testbed 102s Reading package lists... 102s Building dependency tree... 102s Reading state information... 102s Starting pkgProblemResolver with broken count: 0 102s Starting 2 pkgProblemResolver with broken count: 0 102s Done 102s The following NEW packages will be installed: 102s autopkgtest-satdep 102s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 102s Need to get 0 B/712 B of archives. 102s After this operation, 0 B of additional disk space will be used. 102s Get:1 /tmp/autopkgtest.TNRCdm/2-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [712 B] 103s Selecting previously unselected package autopkgtest-satdep. 103s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55166 files and directories currently installed.) 103s Preparing to unpack .../2-autopkgtest-satdep.deb ... 103s Unpacking autopkgtest-satdep (0) ... 103s Setting up autopkgtest-satdep (0) ... 104s (Reading database ... 55166 files and directories currently installed.) 104s Removing autopkgtest-satdep (0) ... 105s autopkgtest [10:59:36]: test run-dicom-image-transcode-test: [----------------------- 105s User 'orthanc' exists. 105s Starting orthanc (via systemctl): orthanc.service. 105s Orthanc is active. 105s W0616 10:59:36.484765 3ffbcd589e0 FromDcmtkBridge.cpp:382] Loading external DICOM dictionary: "/usr/share/libdcmtk17/dicom.dic" 105s W0616 10:59:36.495599 3ffbcd589e0 ApplicationToolbox.cpp:251] Orthanc WSI version: 2.0 105s W0616 10:59:36.495869 3ffbcd589e0 HttpClient.cpp:1189] No certificates are provided to validate peers, set "HttpsCACertificates" if you need to do HTTPS requests 105s W0616 10:59:36.496003 3ffbcd589e0 Dicomizer.cpp:1031] The input image is: CMU-1-Small-Region.tiff 105s W0616 10:59:36.496140 3ffbcd589e0 Dicomizer.cpp:1034] File format of the input image: TIFF 105s W0616 10:59:36.496795 3ffbcd589e0 Dicomizer.cpp:1135] Your pixel spacing is different along the X and Y axes, make sure that you have not inversed the --imaged-width and the --imaged-height options: 0.00505561 vs. 0.00675676 105s W0616 10:59:36.497110 3ffbcd589e0 Dicomizer.cpp:1140] Compression of the individual source tiles: JPEG 105s E: DcmElement: CodeMeaning (0008,0104) larger (1828751056) than remaining bytes (0) in file, premature end of stream 105s E0616 10:59:36.498440 3ffbcd589e0 OrthancException.cpp:61] Bad file format: While creating a DICOM instance, tag (0008,0104) has out-of-range value: "Full Spectrum" 105s E0616 10:59:36.498595 3ffbcd589e0 Dicomizer.cpp:1152] Terminating on exception: Bad file format 105s autopkgtest [10:59:36]: test run-dicom-image-transcode-test: -----------------------] 106s autopkgtest [10:59:37]: test run-dicom-image-transcode-test: - - - - - - - - - - results - - - - - - - - - - 106s run-dicom-image-transcode-test FAIL non-zero exit status 253 106s autopkgtest [10:59:37]: @@@@@@@@@@@@@@@@@@@@ summary 106s run-generate-dataset-test PASS 106s run-dicom-image-transcode-test FAIL non-zero exit status 253 116s nova [W] Using flock in scalingstack-bos02-s390x 116s Creating nova instance adt-oracular-s390x-orthanc-wsi-20240616-102129-juju-7f2275-prod-proposed-migration-environment-2-768e2416-f3da-4c98-a01a-4efaa8ab8456 from image adt/ubuntu-oracular-s390x-server-20240616.img (UUID dd882b34-7da0-4822-87ea-13d5ca0a8a0e)...