6s autopkgtest [23:23:52]: starting date and time: 2024-06-28 23:23:52+0000
  6s autopkgtest [23:23:52]: git checkout: 85adf9a1 setup-testbed: prevent /tmp from getting a tmpfs mount
  6s autopkgtest [23:23:52]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ztx2lrvm/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade elkcode --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.39-3.1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-s390x-10.secgroup --name adt-oracular-s390x-elkcode-20240628-232346-juju-7f2275-prod-proposed-migration-environment-2-f522cf83-7b80-4120-940f-ddbfa9784be0 --image adt/ubuntu-oracular-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
188s autopkgtest [23:26:54]: testbed dpkg architecture: s390x
191s autopkgtest [23:26:57]: testbed apt version: 2.9.5
191s autopkgtest [23:26:57]: @@@@@@@@@@@@@@@@@@@@ test bed setup
202s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [110 kB]
202s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [370 kB]
202s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [2576 B]
202s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [52.0 kB]
202s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [7052 B]
202s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main s390x Packages [89.6 kB]
202s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/restricted s390x Packages [1368 B]
202s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/universe s390x Packages [382 kB]
202s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse s390x Packages [1768 B]
203s Fetched 1017 kB in 1s (1033 kB/s)
203s Reading package lists...
224s Reading package lists...
224s Building dependency tree...
224s Reading state information...
224s Calculating upgrade...
224s The following packages will be upgraded:
224s   base-files libc-bin libc-dev-bin libc-devtools libc6 libc6-dev locales
224s   motd-news-config
224s 8 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
224s Need to get 9471 kB of archives.
224s After this operation, 106 kB of additional disk space will be used.
224s Get:1 http://ftpmaster.internal/ubuntu oracular/main s390x motd-news-config all 13.3ubuntu2 [5416 B]
225s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/main s390x libc-devtools s390x 2.39-3.1ubuntu2 [30.7 kB]
225s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/main s390x libc6-dev s390x 2.39-3.1ubuntu2 [1626 kB]
225s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main s390x libc-dev-bin s390x 2.39-3.1ubuntu2 [20.2 kB]
225s Get:5 http://ftpmaster.internal/ubuntu oracular/main s390x base-files s390x 13.3ubuntu2 [75.3 kB]
225s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main s390x libc6 s390x 2.39-3.1ubuntu2 [2839 kB]
225s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main s390x libc-bin s390x 2.39-3.1ubuntu2 [655 kB]
225s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/main s390x locales all 2.39-3.1ubuntu2 [4220 kB]
226s Preconfiguring packages ...
226s Fetched 9471 kB in 1s (6837 kB/s)
226s (Reading database ... 
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(Reading database ... 54651 files and directories currently installed.)
226s Preparing to unpack .../motd-news-config_13.3ubuntu2_all.deb ...
226s Unpacking motd-news-config (13.3ubuntu2) over (13.1ubuntu1) ...
226s Preparing to unpack .../libc-devtools_2.39-3.1ubuntu2_s390x.deb ...
226s Unpacking libc-devtools (2.39-3.1ubuntu2) over (2.39-0ubuntu9) ...
226s Preparing to unpack .../libc6-dev_2.39-3.1ubuntu2_s390x.deb ...
226s Unpacking libc6-dev:s390x (2.39-3.1ubuntu2) over (2.39-0ubuntu9) ...
226s Preparing to unpack .../libc-dev-bin_2.39-3.1ubuntu2_s390x.deb ...
226s Unpacking libc-dev-bin (2.39-3.1ubuntu2) over (2.39-0ubuntu9) ...
226s Preparing to unpack .../base-files_13.3ubuntu2_s390x.deb ...
226s Unpacking base-files (13.3ubuntu2) over (13.1ubuntu1) ...
226s Setting up base-files (13.3ubuntu2) ...
227s Updating /etc/profile to current default.
227s motd-news.service is a disabled or a static unit not running, not starting it.
227s (Reading database ... 
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(Reading database ... 54656 files and directories currently installed.)
227s Preparing to unpack .../libc6_2.39-3.1ubuntu2_s390x.deb ...
227s Unpacking libc6:s390x (2.39-3.1ubuntu2) over (2.39-0ubuntu9) ...
228s Setting up libc6:s390x (2.39-3.1ubuntu2) ...
228s (Reading database ... 
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(Reading database ... 54656 files and directories currently installed.)
228s Preparing to unpack .../libc-bin_2.39-3.1ubuntu2_s390x.deb ...
228s Unpacking libc-bin (2.39-3.1ubuntu2) over (2.39-0ubuntu9) ...
228s Setting up libc-bin (2.39-3.1ubuntu2) ...
228s (Reading database ... 
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(Reading database ... 54656 files and directories currently installed.)
228s Preparing to unpack .../locales_2.39-3.1ubuntu2_all.deb ...
228s Unpacking locales (2.39-3.1ubuntu2) over (2.39-0ubuntu9) ...
228s Setting up motd-news-config (13.3ubuntu2) ...
228s Setting up locales (2.39-3.1ubuntu2) ...
229s Generating locales (this might take a while)...
230s   en_US.UTF-8... done
230s Generation complete.
230s Setting up libc-dev-bin (2.39-3.1ubuntu2) ...
230s Setting up libc-devtools (2.39-3.1ubuntu2) ...
230s Setting up libc6-dev:s390x (2.39-3.1ubuntu2) ...
230s Processing triggers for man-db (2.12.1-2) ...
231s Processing triggers for plymouth-theme-ubuntu-text (24.004.60-1ubuntu7) ...
231s update-initramfs: deferring update (trigger activated)
231s Processing triggers for install-info (7.1-3build2) ...
231s Processing triggers for initramfs-tools (0.142ubuntu28) ...
231s update-initramfs: Generating /boot/initrd.img-6.8.0-31-generic
231s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
235s Using config file '/etc/zipl.conf'
235s Building bootmap in '/boot'
235s Adding IPL section 'ubuntu' (default)
235s Preparing boot device for LD-IPL: vda (0000).
235s Done.
235s Reading package lists...
235s Building dependency tree...
235s Reading state information...
235s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
239s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease
239s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease
239s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease
239s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease
240s Reading package lists...
240s Reading package lists...
240s Building dependency tree...
240s Reading state information...
240s Calculating upgrade...
240s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
240s Reading package lists...
240s Building dependency tree...
240s Reading state information...
241s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
243s autopkgtest [23:27:49]: rebooting testbed after setup commands that affected boot
282s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds...
326s autopkgtest [23:29:12]: testbed running kernel: Linux 6.8.0-31-generic #31-Ubuntu SMP Sat Apr 20 00:14:26 UTC 2024
370s autopkgtest [23:29:56]: @@@@@@@@@@@@@@@@@@@@ apt-source elkcode
379s Get:1 http://ftpmaster.internal/ubuntu oracular/universe elkcode 9.2.12-1build2 (dsc) [2187 B]
379s Get:2 http://ftpmaster.internal/ubuntu oracular/universe elkcode 9.2.12-1build2 (tar) [3299 kB]
379s Get:3 http://ftpmaster.internal/ubuntu oracular/universe elkcode 9.2.12-1build2 (diff) [10.4 kB]
379s gpgv: Signature made Mon Apr  1 05:45:40 2024 UTC
379s gpgv:                using RSA key A089FB36AAFBDAD5ACC1325069F790171A210984
379s gpgv: Can't check signature: No public key
379s dpkg-source: warning: cannot verify inline signature for ./elkcode_9.2.12-1build2.dsc: no acceptable signature found
380s autopkgtest [23:30:06]: testing package elkcode version 9.2.12-1build2
381s autopkgtest [23:30:07]: build not needed
387s autopkgtest [23:30:13]: test testsuite.sh: preparing testbed
402s Reading package lists...
402s Building dependency tree...
402s Reading state information...
402s Starting pkgProblemResolver with broken count: 0
402s Starting 2 pkgProblemResolver with broken count: 0
402s Done
403s The following additional packages will be installed:
403s   elk-lapw libatomic1 libblas3 libevent-pthreads-2.1-7t64 libfabric1
403s   libfftw3-double3 libfftw3-single3 libgfortran5 libgomp1 libhwloc-plugins
403s   libhwloc15 liblapack3 libmunge2 libopenmpi3t64 libpciaccess0 libpmix2t64
403s   librdmacm1t64 libxc9 libxnvctrl0 mpi-default-bin ocl-icd-libopencl1
403s   openmpi-bin openmpi-common
403s Suggested packages:
403s   gnuplot xcrysden libfftw3-bin libfftw3-dev opencl-icd gfortran
403s   | fortran-compiler
403s The following NEW packages will be installed:
403s   autopkgtest-satdep elk-lapw libatomic1 libblas3 libevent-pthreads-2.1-7t64
403s   libfabric1 libfftw3-double3 libfftw3-single3 libgfortran5 libgomp1
403s   libhwloc-plugins libhwloc15 liblapack3 libmunge2 libopenmpi3t64
403s   libpciaccess0 libpmix2t64 librdmacm1t64 libxc9 libxnvctrl0 mpi-default-bin
403s   ocl-icd-libopencl1 openmpi-bin openmpi-common
403s 0 upgraded, 24 newly installed, 0 to remove and 0 not upgraded.
403s Need to get 17.4 MB/17.4 MB of archives.
403s After this operation, 45.1 MB of additional disk space will be used.
403s Get:1 /tmp/autopkgtest.lLpujm/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [708 B]
403s Get:2 http://ftpmaster.internal/ubuntu oracular/main s390x libblas3 s390x 3.12.0-3build1 [245 kB]
403s Get:3 http://ftpmaster.internal/ubuntu oracular/main s390x libgomp1 s390x 14.1.0-1ubuntu1 [151 kB]
403s Get:4 http://ftpmaster.internal/ubuntu oracular/main s390x libfftw3-double3 s390x 3.3.10-1ubuntu3 [512 kB]
403s Get:5 http://ftpmaster.internal/ubuntu oracular/main s390x libfftw3-single3 s390x 3.3.10-1ubuntu3 [481 kB]
403s Get:6 http://ftpmaster.internal/ubuntu oracular/main s390x libgfortran5 s390x 14.1.0-1ubuntu1 [600 kB]
403s Get:7 http://ftpmaster.internal/ubuntu oracular/main s390x liblapack3 s390x 3.12.0-3build1 [2976 kB]
403s Get:8 http://ftpmaster.internal/ubuntu oracular/main s390x libevent-pthreads-2.1-7t64 s390x 2.1.12-stable-10 [7870 B]
403s Get:9 http://ftpmaster.internal/ubuntu oracular/main s390x libatomic1 s390x 14.1.0-1ubuntu1 [9378 B]
403s Get:10 http://ftpmaster.internal/ubuntu oracular/main s390x librdmacm1t64 s390x 50.0-2build2 [74.1 kB]
403s Get:11 http://ftpmaster.internal/ubuntu oracular/universe s390x libfabric1 s390x 1.17.0-3build2 [566 kB]
403s Get:12 http://ftpmaster.internal/ubuntu oracular/universe s390x libhwloc15 s390x 2.10.0-1build1 [177 kB]
403s Get:13 http://ftpmaster.internal/ubuntu oracular/universe s390x libmunge2 s390x 0.5.15-4build1 [15.6 kB]
403s Get:14 http://ftpmaster.internal/ubuntu oracular/main s390x libpciaccess0 s390x 0.17-3build1 [19.0 kB]
403s Get:15 http://ftpmaster.internal/ubuntu oracular/main s390x libxnvctrl0 s390x 510.47.03-0ubuntu4 [12.7 kB]
403s Get:16 http://ftpmaster.internal/ubuntu oracular/universe s390x ocl-icd-libopencl1 s390x 2.3.2-1build1 [41.1 kB]
403s Get:17 http://ftpmaster.internal/ubuntu oracular/universe s390x libhwloc-plugins s390x 2.10.0-1build1 [16.3 kB]
403s Get:18 http://ftpmaster.internal/ubuntu oracular/universe s390x libpmix2t64 s390x 5.0.1-4.1build1 [728 kB]
404s Get:19 http://ftpmaster.internal/ubuntu oracular/universe s390x libopenmpi3t64 s390x 4.1.6-7ubuntu2 [2437 kB]
404s Get:20 http://ftpmaster.internal/ubuntu oracular/universe s390x libxc9 s390x 5.2.3-1ubuntu1 [4120 kB]
404s Get:21 http://ftpmaster.internal/ubuntu oracular/universe s390x openmpi-common all 4.1.6-7ubuntu2 [170 kB]
404s Get:22 http://ftpmaster.internal/ubuntu oracular/universe s390x openmpi-bin s390x 4.1.6-7ubuntu2 [84.5 kB]
404s Get:23 http://ftpmaster.internal/ubuntu oracular/universe s390x mpi-default-bin s390x 1.15build1 [2378 B]
404s Get:24 http://ftpmaster.internal/ubuntu oracular/universe s390x elk-lapw s390x 9.2.12-1build2 [3962 kB]
404s Fetched 17.4 MB in 1s (11.7 MB/s)
404s Selecting previously unselected package libblas3:s390x.
404s (Reading database ... 
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(Reading database ... 54656 files and directories currently installed.)
404s Preparing to unpack .../00-libblas3_3.12.0-3build1_s390x.deb ...
404s Unpacking libblas3:s390x (3.12.0-3build1) ...
404s Selecting previously unselected package libgomp1:s390x.
404s Preparing to unpack .../01-libgomp1_14.1.0-1ubuntu1_s390x.deb ...
404s Unpacking libgomp1:s390x (14.1.0-1ubuntu1) ...
404s Selecting previously unselected package libfftw3-double3:s390x.
404s Preparing to unpack .../02-libfftw3-double3_3.3.10-1ubuntu3_s390x.deb ...
404s Unpacking libfftw3-double3:s390x (3.3.10-1ubuntu3) ...
404s Selecting previously unselected package libfftw3-single3:s390x.
404s Preparing to unpack .../03-libfftw3-single3_3.3.10-1ubuntu3_s390x.deb ...
404s Unpacking libfftw3-single3:s390x (3.3.10-1ubuntu3) ...
404s Selecting previously unselected package libgfortran5:s390x.
404s Preparing to unpack .../04-libgfortran5_14.1.0-1ubuntu1_s390x.deb ...
404s Unpacking libgfortran5:s390x (14.1.0-1ubuntu1) ...
404s Selecting previously unselected package liblapack3:s390x.
404s Preparing to unpack .../05-liblapack3_3.12.0-3build1_s390x.deb ...
404s Unpacking liblapack3:s390x (3.12.0-3build1) ...
405s Selecting previously unselected package libevent-pthreads-2.1-7t64:s390x.
405s Preparing to unpack .../06-libevent-pthreads-2.1-7t64_2.1.12-stable-10_s390x.deb ...
405s Unpacking libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ...
405s Selecting previously unselected package libatomic1:s390x.
405s Preparing to unpack .../07-libatomic1_14.1.0-1ubuntu1_s390x.deb ...
405s Unpacking libatomic1:s390x (14.1.0-1ubuntu1) ...
405s Selecting previously unselected package librdmacm1t64:s390x.
405s Preparing to unpack .../08-librdmacm1t64_50.0-2build2_s390x.deb ...
405s Unpacking librdmacm1t64:s390x (50.0-2build2) ...
405s Selecting previously unselected package libfabric1:s390x.
405s Preparing to unpack .../09-libfabric1_1.17.0-3build2_s390x.deb ...
405s Unpacking libfabric1:s390x (1.17.0-3build2) ...
405s Selecting previously unselected package libhwloc15:s390x.
405s Preparing to unpack .../10-libhwloc15_2.10.0-1build1_s390x.deb ...
405s Unpacking libhwloc15:s390x (2.10.0-1build1) ...
405s Selecting previously unselected package libmunge2:s390x.
405s Preparing to unpack .../11-libmunge2_0.5.15-4build1_s390x.deb ...
405s Unpacking libmunge2:s390x (0.5.15-4build1) ...
405s Selecting previously unselected package libpciaccess0:s390x.
405s Preparing to unpack .../12-libpciaccess0_0.17-3build1_s390x.deb ...
405s Unpacking libpciaccess0:s390x (0.17-3build1) ...
405s Selecting previously unselected package libxnvctrl0:s390x.
405s Preparing to unpack .../13-libxnvctrl0_510.47.03-0ubuntu4_s390x.deb ...
405s Unpacking libxnvctrl0:s390x (510.47.03-0ubuntu4) ...
405s Selecting previously unselected package ocl-icd-libopencl1:s390x.
405s Preparing to unpack .../14-ocl-icd-libopencl1_2.3.2-1build1_s390x.deb ...
405s Unpacking ocl-icd-libopencl1:s390x (2.3.2-1build1) ...
405s Selecting previously unselected package libhwloc-plugins:s390x.
405s Preparing to unpack .../15-libhwloc-plugins_2.10.0-1build1_s390x.deb ...
405s Unpacking libhwloc-plugins:s390x (2.10.0-1build1) ...
405s Selecting previously unselected package libpmix2t64:s390x.
405s Preparing to unpack .../16-libpmix2t64_5.0.1-4.1build1_s390x.deb ...
405s Unpacking libpmix2t64:s390x (5.0.1-4.1build1) ...
405s Selecting previously unselected package libopenmpi3t64:s390x.
405s Preparing to unpack .../17-libopenmpi3t64_4.1.6-7ubuntu2_s390x.deb ...
405s Unpacking libopenmpi3t64:s390x (4.1.6-7ubuntu2) ...
405s Selecting previously unselected package libxc9:s390x.
405s Preparing to unpack .../18-libxc9_5.2.3-1ubuntu1_s390x.deb ...
405s Unpacking libxc9:s390x (5.2.3-1ubuntu1) ...
405s Selecting previously unselected package openmpi-common.
405s Preparing to unpack .../19-openmpi-common_4.1.6-7ubuntu2_all.deb ...
405s Unpacking openmpi-common (4.1.6-7ubuntu2) ...
405s Selecting previously unselected package openmpi-bin.
405s Preparing to unpack .../20-openmpi-bin_4.1.6-7ubuntu2_s390x.deb ...
405s Unpacking openmpi-bin (4.1.6-7ubuntu2) ...
405s Selecting previously unselected package mpi-default-bin.
405s Preparing to unpack .../21-mpi-default-bin_1.15build1_s390x.deb ...
405s Unpacking mpi-default-bin (1.15build1) ...
405s Selecting previously unselected package elk-lapw.
405s Preparing to unpack .../22-elk-lapw_9.2.12-1build2_s390x.deb ...
405s Unpacking elk-lapw (9.2.12-1build2) ...
405s Selecting previously unselected package autopkgtest-satdep.
405s Preparing to unpack .../23-1-autopkgtest-satdep.deb ...
405s Unpacking autopkgtest-satdep (0) ...
405s Setting up libpciaccess0:s390x (0.17-3build1) ...
405s Setting up libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ...
405s Setting up libgomp1:s390x (14.1.0-1ubuntu1) ...
405s Setting up libxnvctrl0:s390x (510.47.03-0ubuntu4) ...
405s Setting up libblas3:s390x (3.12.0-3build1) ...
405s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode
405s Setting up libmunge2:s390x (0.5.15-4build1) ...
405s Setting up libhwloc15:s390x (2.10.0-1build1) ...
405s Setting up libatomic1:s390x (14.1.0-1ubuntu1) ...
405s Setting up libfftw3-double3:s390x (3.3.10-1ubuntu3) ...
405s Setting up libgfortran5:s390x (14.1.0-1ubuntu1) ...
405s Setting up ocl-icd-libopencl1:s390x (2.3.2-1build1) ...
405s Setting up openmpi-common (4.1.6-7ubuntu2) ...
405s Setting up librdmacm1t64:s390x (50.0-2build2) ...
405s Setting up libxc9:s390x (5.2.3-1ubuntu1) ...
405s Setting up libfabric1:s390x (1.17.0-3build2) ...
405s Setting up liblapack3:s390x (3.12.0-3build1) ...
405s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode
405s Setting up libfftw3-single3:s390x (3.3.10-1ubuntu3) ...
405s Setting up libhwloc-plugins:s390x (2.10.0-1build1) ...
405s Setting up libpmix2t64:s390x (5.0.1-4.1build1) ...
405s Setting up libopenmpi3t64:s390x (4.1.6-7ubuntu2) ...
405s Setting up openmpi-bin (4.1.6-7ubuntu2) ...
405s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
405s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
405s Setting up mpi-default-bin (1.15build1) ...
405s Setting up elk-lapw (9.2.12-1build2) ...
405s Setting up autopkgtest-satdep (0) ...
405s Processing triggers for man-db (2.12.1-2) ...
406s Processing triggers for libc-bin (2.39-3.1ubuntu2) ...
410s (Reading database ... 55661 files and directories currently installed.)
410s Removing autopkgtest-satdep (0) ...
411s autopkgtest [23:30:37]: test testsuite.sh: [-----------------------
411s 
411s Running test in directory test_001...
411s 
411s +---------------------------------+
411s | Elk code version 9.2.12 started |
411s +---------------------------------+
411s 
411s Number of MPI processes :      1
411s Number of OpenMP threads per MPI process :    1
411s Total number of threads (MPI x OpenMP) :      1
411s Maximum OpenMP nesting level :    4
411s Number of OpenMP threads at first nesting level :    1
411s Number of MKL threads :    1
411s 
411s RAM disk enabled
411s 
411s +-----------------------+
411s | Current task :      0 |
411s +-----------------------+
411s Info(checkmt): changed muffin-tin radius of species   3 (Cu) from   2.4000 to   1.9694
411s Info(checkmt): changed muffin-tin radius of species   4 (O) from   1.8000 to   1.4770
411s 
411s Info(findsymcrys): atomic basis shift (lattice) :
411s   0.5000000000      0.5000000000      0.5000000000    
411s See GEOMETRY.OUT for new atomic positions
433s 
433s Warning(gndstate): failed to reach self-consistency after    4 loops
439s 
439s +-----------------------+
439s | Current task :      1 |
439s +-----------------------+
459s 
459s Warning(gndstate): failed to reach self-consistency after    4 loops
464s 
464s +-----------------------+
464s | Current task :    115 |
464s +-----------------------+
469s 
469s Info(writeefg): electric field gradient written to EFG.OUT
469s 
469s +-----------------------+
469s | Current task :    500 |
469s +-----------------------+
469s 
469s Info(testcheck): passed all tests
469s 
469s +------------------+
469s | Elk code stopped |
469s +------------------+
469s  Passed
469s 
469s Running test in directory test_002...
469s 
469s +---------------------------------+
469s | Elk code version 9.2.12 started |
469s +---------------------------------+
469s 
469s Number of MPI processes :      1
469s Number of OpenMP threads per MPI process :    1
469s Total number of threads (MPI x OpenMP) :      1
469s Maximum OpenMP nesting level :    4
469s Number of OpenMP threads at first nesting level :    1
469s Number of MKL threads :    1
469s 
469s RAM disk enabled
469s 
469s +-----------------------+
469s | Current task :      0 |
469s +-----------------------+
469s Info(checkmt): changed muffin-tin radius of species   1 (Fe) from   2.4000 to   2.3202
471s 
471s Warning(gndstate): failed to reach self-consistency after    5 loops
471s 
471s +-----------------------+
471s | Current task :    500 |
471s +-----------------------+
471s 
471s Info(testcheck): passed all tests
471s 
471s +------------------+
471s | Elk code stopped |
471s +------------------+
471s  Passed
471s 
471s Running test in directory test_003...
471s 
471s +---------------------------------+
471s | Elk code version 9.2.12 started |
471s +---------------------------------+
471s 
471s Number of MPI processes :      1
471s Number of OpenMP threads per MPI process :    1
471s Total number of threads (MPI x OpenMP) :      1
471s Maximum OpenMP nesting level :    4
471s Number of OpenMP threads at first nesting level :    1
471s Number of MKL threads :    1
471s 
471s RAM disk enabled
471s 
471s +-----------------------+
471s | Current task :      0 |
471s +-----------------------+
471s Info(checkmt): changed muffin-tin radius of species   1 (Si) from   2.2000 to   2.1436
471s 
471s Info(findsymcrys): atomic basis shift (lattice) :
471s   0.3650000000      0.3650000000      0.3650000000    
471s See GEOMETRY.OUT for new atomic positions
472s 
472s Warning(gndstate): failed to reach self-consistency after   10 loops
473s 
473s +-----------------------+
473s | Current task :    500 |
473s +-----------------------+
473s 
473s Info(testcheck): passed all tests
473s 
473s +------------------+
473s | Elk code stopped |
473s +------------------+
473s  Passed
473s 
473s Running test in directory test_005...
473s 
473s +---------------------------------+
473s | Elk code version 9.2.12 started |
473s +---------------------------------+
473s 
473s Number of MPI processes :      1
473s Number of OpenMP threads per MPI process :    1
473s Total number of threads (MPI x OpenMP) :      1
473s Maximum OpenMP nesting level :    4
473s Number of OpenMP threads at first nesting level :    1
473s Number of MKL threads :    1
473s 
473s RAM disk enabled
477s 
477s +-----------------------+
477s | Current task :      0 |
477s +-----------------------+
477s Info(checkmt): changed muffin-tin radius of species   1 (Fe) from   2.4000 to   2.3615
477s 
477s Warning(gndstate): failed to reach self-consistency after    5 loops
477s 
477s +-----------------------+
477s | Current task :    500 |
477s +-----------------------+
477s 
477s Info(testcheck): passed all tests
477s 
477s +------------------+
477s | Elk code stopped |
477s +------------------+
477s  Passed
477s 
477s Running test in directory test_007...
477s 
477s +---------------------------------+
477s | Elk code version 9.2.12 started |
477s +---------------------------------+
477s 
477s Number of MPI processes :      1
477s Number of OpenMP threads per MPI process :    1
477s Total number of threads (MPI x OpenMP) :      1
477s Maximum OpenMP nesting level :    4
477s Number of OpenMP threads at first nesting level :    1
477s Number of MKL threads :    1
477s 
477s RAM disk enabled
477s 
477s +-----------------------+
477s | Current task :      0 |
477s +-----------------------+
506s 
506s +-----------------------+
506s | Current task :     15 |
506s +-----------------------+
507s 
507s Info(writelsj):
507s  muffin-tin L, S and J expectation values written to LSJ.OUT
507s 
507s +-----------------------+
507s | Current task :     16 |
507s +-----------------------+
508s 
508s Info(writelsj):
508s  muffin-tin L, S and J expectation values for each k-point and state
508s   in kstlist written to LSJ_KST.OUT
508s 
508s +-----------------------+
508s | Current task :    500 |
508s +-----------------------+
508s 
508s Info(testcheck): passed all tests
508s 
508s +------------------+
508s | Elk code stopped |
508s +------------------+
508s  Passed
508s 
508s Running test in directory test_009...
508s 
508s +---------------------------------+
508s | Elk code version 9.2.12 started |
508s +---------------------------------+
508s 
508s Number of MPI processes :      1
508s Number of OpenMP threads per MPI process :    1
508s Total number of threads (MPI x OpenMP) :      1
508s Maximum OpenMP nesting level :    4
508s Number of OpenMP threads at first nesting level :    1
508s Number of MKL threads :    1
508s 
508s RAM disk enabled
508s 
508s +-----------------------+
508s | Current task :      0 |
508s +-----------------------+
508s Info(checkmt): changed muffin-tin radius of species   1 (B) from   1.8000 to   1.6129
508s Info(checkmt): changed muffin-tin radius of species   2 (N+) from   1.4500 to   1.2993
510s 
510s Warning(gndstate): failed to reach self-consistency after    6 loops
510s 
510s +-----------------------+
510s | Current task :    140 |
510s +-----------------------+
510s Info(elnes):      1 of      8 k-points
510s Info(elnes):      2 of      8 k-points
510s Info(elnes):      3 of      8 k-points
510s Info(elnes):      4 of      8 k-points
510s Info(elnes):      5 of      8 k-points
510s Info(elnes):      6 of      8 k-points
510s Info(elnes):      7 of      8 k-points
510s Info(elnes):      8 of      8 k-points
513s 
513s Info(elnes):
513s  ELNES double differential cross-section written to ELNES.OUT
513s 
513s +-----------------------+
513s | Current task :    500 |
513s +-----------------------+
513s 
513s Info(testcheck): passed all tests
513s 
513s +------------------+
513s | Elk code stopped |
513s +------------------+
513s  Passed
513s 
513s Running test in directory test_010...
513s 
513s +---------------------------------+
513s | Elk code version 9.2.12 started |
513s +---------------------------------+
513s 
513s Number of MPI processes :      1
513s Number of OpenMP threads per MPI process :    1
513s Total number of threads (MPI x OpenMP) :      1
513s Maximum OpenMP nesting level :    4
513s Number of OpenMP threads at first nesting level :    1
513s Number of MKL threads :    1
513s 
513s RAM disk enabled
513s 
513s +-----------------------+
513s | Current task :      0 |
513s +-----------------------+
513s Info(checkmt): changed muffin-tin radius of species   1 (O) from   1.8000 to   0.9906
513s Info(checkmt): changed muffin-tin radius of species   2 (H) from   1.4000 to   0.7704
513s 
513s Warning(linengy): could not find   1 linearisation energies in s.c. loop     1
515s 
515s Warning(gndstate): failed to reach self-consistency after    2 loops
515s 
515s Warning(linengy): could not find   1 linearisation energies in s.c. loop     2
516s 
516s +-----------------------+
516s | Current task :    500 |
516s +-----------------------+
516s 
516s Info(testcheck): passed all tests
516s 
516s +------------------+
516s | Elk code stopped |
516s +------------------+
516s  Passed
516s 
516s Running test in directory test_011...
516s 
516s +---------------------------------+
516s | Elk code version 9.2.12 started |
516s +---------------------------------+
516s 
516s Number of MPI processes :      1
516s Number of OpenMP threads per MPI process :    1
516s Total number of threads (MPI x OpenMP) :      1
516s Maximum OpenMP nesting level :    4
516s Number of OpenMP threads at first nesting level :    1
516s Number of MKL threads :    1
516s 
516s RAM disk enabled
516s 
516s +-----------------------+
517s | Current task :      0 |
517s +-----------------------+
517s Info(checkmt): changed muffin-tin radius of species   1 (Si) from   2.2000 to   2.1964
517s 
517s Info(findsymcrys): atomic basis shift (lattice) :
517s   0.3750000000      0.3750000000      0.3750000000    
517s See GEOMETRY.OUT for new atomic positions
517s 
517s Warning(gndstate): failed to reach self-consistency after    2 loops
517s 
517s +-----------------------+
517s | Current task :      5 |
517s +-----------------------+
518s 
518s Info(genkmat):      1 of      2 k-points
518s Info(genkmat):      2 of      2 k-points
518s Info(hartfock): self-consistent loop number :    1
518s Info(eveqnhf):      1 of      2 k-points
519s Info(eveqnhf):      2 of      2 k-points
520s Info(hartfock): self-consistent loop number :    2
520s Info(eveqnhf):      1 of      2 k-points
520s Info(eveqnhf):      2 of      2 k-points
521s Info(exxengy):      1 of      2 k-points
521s Info(exxengy):      2 of      2 k-points
522s 
522s +-----------------------+
522s | Current task :    500 |
522s +-----------------------+
522s 
522s Info(testcheck): passed all tests
522s 
522s +------------------+
522s | Elk code stopped |
522s +------------------+
522s  Passed
522s 
522s Running test in directory test_013...
522s 
522s +---------------------------------+
522s | Elk code version 9.2.12 started |
522s +---------------------------------+
522s 
522s Number of MPI processes :      1
522s Number of OpenMP threads per MPI process :    1
522s Total number of threads (MPI x OpenMP) :      1
522s Maximum OpenMP nesting level :    4
522s Number of OpenMP threads at first nesting level :    1
522s Number of MKL threads :    1
522s 
522s RAM disk enabled
522s 
522s +-----------------------+
522s | Current task :      0 |
522s +-----------------------+
522s Info(checkmt): changed muffin-tin radius of species   1 (Fe) from   2.4000 to   2.3828
522s Info(checkmt): changed muffin-tin radius of species   2 (Al) from   2.2000 to   2.1842
543s 
543s Warning(gndstate): failed to reach self-consistency after    4 loops
556s 
556s +-----------------------+
556s | Current task :    500 |
556s +-----------------------+
556s 
556s Info(testcheck): passed all tests
556s 
556s +------------------+
556s | Elk code stopped |
556s +------------------+
556s  Passed
556s 
556s Running test in directory test_014...
556s 
556s +---------------------------------+
556s | Elk code version 9.2.12 started |
556s +---------------------------------+
556s 
556s Number of MPI processes :      1
556s Number of OpenMP threads per MPI process :    1
556s Total number of threads (MPI x OpenMP) :      1
556s Maximum OpenMP nesting level :    4
556s Number of OpenMP threads at first nesting level :    1
556s Number of MKL threads :    1
556s 
556s RAM disk enabled
556s 
556s +-----------------------+
556s | Current task :      0 |
556s +-----------------------+
556s Info(checkmt): changed muffin-tin radius of species   1 (Si) from   2.2000 to   2.1964
556s 
556s Info(findsymcrys): atomic basis shift (lattice) :
556s   0.3750000000      0.3750000000      0.3750000000    
556s See GEOMETRY.OUT for new atomic positions
557s Info(oepvcl):      1 of      8 k-points
559s Info(oepvcl):      2 of      8 k-points
560s Info(oepvcl):      3 of      8 k-points
561s Info(oepvcl):      4 of      8 k-points
563s Info(oepvcl):      5 of      8 k-points
564s Info(oepvcl):      6 of      8 k-points
566s Info(oepvcl):      7 of      8 k-points
567s Info(oepvcl):      8 of      8 k-points
571s Info(oepmain): done   10 iterations of   20
576s Info(oepmain): done   20 iterations of   20
576s 
576s Warning(gndstate): failed to reach self-consistency after    2 loops
576s Info(oepvcl):      1 of      8 k-points
577s Info(oepvcl):      2 of      8 k-points
578s Info(oepvcl):      3 of      8 k-points
580s Info(oepvcl):      4 of      8 k-points
581s Info(oepvcl):      5 of      8 k-points
582s Info(oepvcl):      6 of      8 k-points
584s Info(oepvcl):      7 of      8 k-points
585s Info(oepvcl):      8 of      8 k-points
590s Info(oepmain): done   10 iterations of   20
593s Info(oepmain): done   20 iterations of   20
593s Info(exxengy):      1 of      8 k-points
593s Info(exxengy):      2 of      8 k-points
594s Info(exxengy):      3 of      8 k-points
594s Info(exxengy):      4 of      8 k-points
594s Info(exxengy):      5 of      8 k-points
594s Info(exxengy):      6 of      8 k-points
595s Info(exxengy):      7 of      8 k-points
595s Info(exxengy):      8 of      8 k-points
595s 
595s +-----------------------+
595s | Current task :    500 |
595s +-----------------------+
595s 
595s Info(testcheck): passed all tests
595s 
595s +------------------+
595s | Elk code stopped |
595s +------------------+
595s  Passed
595s 
595s Running test in directory test_018...
595s 
595s +---------------------------------+
595s | Elk code version 9.2.12 started |
595s +---------------------------------+
595s 
595s Number of MPI processes :      1
595s Number of OpenMP threads per MPI process :    1
595s Total number of threads (MPI x OpenMP) :      1
595s Maximum OpenMP nesting level :    4
595s Number of OpenMP threads at first nesting level :    1
595s Number of MKL threads :    1
595s 
595s RAM disk enabled
595s 
595s +-----------------------+
595s | Current task :      0 |
595s +-----------------------+
598s 
598s +-----------------------+
598s | Current task :    205 |
598s +-----------------------+
600s Info(phonon): working on DYN_Q0000_0000_0000_S01_A001_P1.OUT
617s Info(phonon): working on DYN_Q0102_0000_0000_S01_A001_P1.OUT
641s Info(phonon): working on DYN_Q0102_0102_0102_S01_A001_P1.OUT
660s Info(phonon): working on DYN_Q0000_0000_0000_S01_A001_P2.OUT
677s Info(phonon): working on DYN_Q0102_0000_0000_S01_A001_P2.OUT
701s Info(phonon): working on DYN_Q0102_0102_0102_S01_A001_P2.OUT
721s Info(phonon): working on DYN_Q0000_0000_0000_S01_A001_P3.OUT
737s Info(phonon): working on DYN_Q0102_0000_0000_S01_A001_P3.OUT
757s Info(phonon): working on DYN_Q0102_0102_0102_S01_A001_P3.OUT
777s Info(dyntask): nothing more to do
777s 
777s +-----------------------+
777s | Current task :    210 |
777s +-----------------------+
782s 
782s Info(phdos):
782s  phonon density of states written to PHDOS.OUT
782s  thermodynamic properties written to THERMO.OUT
782s 
782s +-----------------------+
782s | Current task :    500 |
782s +-----------------------+
782s 
782s Info(testcheck): passed all tests
782s 
782s +------------------+
782s | Elk code stopped |
782s +------------------+
782s  Passed
782s autopkgtest [23:36:48]: test testsuite.sh: -----------------------]
787s testsuite.sh         PASS
787s autopkgtest [23:36:53]: test testsuite.sh:  - - - - - - - - - - results - - - - - - - - - -
788s autopkgtest [23:36:54]: @@@@@@@@@@@@@@@@@@@@ summary
788s testsuite.sh         PASS
808s nova [W] Using flock in scalingstack-bos02-s390x
808s Creating nova instance adt-oracular-s390x-elkcode-20240628-232346-juju-7f2275-prod-proposed-migration-environment-2-f522cf83-7b80-4120-940f-ddbfa9784be0 from image adt/ubuntu-oracular-s390x-server-20240628.img (UUID f2f1fd3c-0325-4f0e-bc8e-969371bf0649)...