0s autopkgtest [16:12:13]: starting date and time: 2024-07-08 16:12:13+0000 0s autopkgtest [16:12:13]: git checkout: fd3bed09 nova: allow more retries for quota issues 0s autopkgtest [16:12:13]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.d4zjzubp/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:mpi-defaults --apt-upgrade abinit --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=mpi-defaults/1.17 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-s390x-4.secgroup --name adt-oracular-s390x-abinit-20240708-161213-juju-7f2275-prod-proposed-migration-environment-2-cb1d0a5c-7659-464b-bf2a-57d92ad36133 --image adt/ubuntu-oracular-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 85s autopkgtest [16:13:38]: testbed dpkg architecture: s390x 85s autopkgtest [16:13:38]: testbed apt version: 2.9.6 85s autopkgtest [16:13:38]: @@@@@@@@@@@@@@@@@@@@ test bed setup 86s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [126 kB] 86s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [3336 B] 86s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [50.6 kB] 86s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [8548 B] 86s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [360 kB] 87s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main s390x Packages [88.2 kB] 87s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main s390x c-n-f Metadata [2548 B] 87s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/restricted s390x Packages [1368 B] 87s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/restricted s390x c-n-f Metadata [120 B] 87s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/universe s390x Packages [363 kB] 87s Get:11 http://ftpmaster.internal/ubuntu oracular-proposed/universe s390x c-n-f Metadata [8624 B] 87s Get:12 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse s390x Packages [1448 B] 87s Get:13 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse s390x c-n-f Metadata [120 B] 87s Fetched 1015 kB in 1s (1121 kB/s) 87s Reading package lists... 89s Reading package lists... 90s Building dependency tree... 90s Reading state information... 90s Calculating upgrade... 90s The following packages will be upgraded: 90s libnetplan1 netplan-generator netplan.io python3-netplan 90s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 90s Need to get 276 kB of archives. 90s After this operation, 1024 B of additional disk space will be used. 90s Get:1 http://ftpmaster.internal/ubuntu oracular/main s390x netplan-generator s390x 1.0.1-1ubuntu2 [59.5 kB] 90s Get:2 http://ftpmaster.internal/ubuntu oracular/main s390x python3-netplan s390x 1.0.1-1ubuntu2 [23.0 kB] 90s Get:3 http://ftpmaster.internal/ubuntu oracular/main s390x netplan.io s390x 1.0.1-1ubuntu2 [66.2 kB] 90s Get:4 http://ftpmaster.internal/ubuntu oracular/main s390x libnetplan1 s390x 1.0.1-1ubuntu2 [127 kB] 91s Fetched 276 kB in 0s (583 kB/s) 91s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 54702 files and directories currently installed.) 91s Preparing to unpack .../netplan-generator_1.0.1-1ubuntu2_s390x.deb ... 91s Adding 'diversion of /lib/systemd/system-generators/netplan to /lib/systemd/system-generators/netplan.usr-is-merged by netplan-generator' 91s Unpacking netplan-generator (1.0.1-1ubuntu2) over (1.0.1-1ubuntu1) ... 91s Preparing to unpack .../python3-netplan_1.0.1-1ubuntu2_s390x.deb ... 91s Unpacking python3-netplan (1.0.1-1ubuntu2) over (1.0.1-1ubuntu1) ... 91s Preparing to unpack .../netplan.io_1.0.1-1ubuntu2_s390x.deb ... 91s Unpacking netplan.io (1.0.1-1ubuntu2) over (1.0.1-1ubuntu1) ... 91s Preparing to unpack .../libnetplan1_1.0.1-1ubuntu2_s390x.deb ... 91s Unpacking libnetplan1:s390x (1.0.1-1ubuntu2) over (1.0.1-1ubuntu1) ... 91s Setting up libnetplan1:s390x (1.0.1-1ubuntu2) ... 91s Setting up python3-netplan (1.0.1-1ubuntu2) ... 91s Setting up netplan-generator (1.0.1-1ubuntu2) ... 91s Removing 'diversion of /lib/systemd/system-generators/netplan to /lib/systemd/system-generators/netplan.usr-is-merged by netplan-generator' 91s Setting up netplan.io (1.0.1-1ubuntu2) ... 91s Processing triggers for libc-bin (2.39-0ubuntu9) ... 91s Processing triggers for man-db (2.12.1-2) ... 91s Processing triggers for dbus (1.14.10-4ubuntu4) ... 91s Reading package lists... 92s Building dependency tree... 92s Reading state information... 92s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 92s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 92s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease 92s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 92s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 93s Reading package lists... 93s Reading package lists... 93s Building dependency tree... 93s Reading state information... 94s Calculating upgrade... 94s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 94s Reading package lists... 94s Building dependency tree... 94s Reading state information... 94s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 97s autopkgtest [16:13:50]: testbed running kernel: Linux 6.8.0-31-generic #31-Ubuntu SMP Sat Apr 20 00:14:26 UTC 2024 97s autopkgtest [16:13:50]: @@@@@@@@@@@@@@@@@@@@ apt-source abinit 109s Get:1 http://ftpmaster.internal/ubuntu oracular/universe abinit 9.10.4-2ubuntu3 (dsc) [2571 B] 109s Get:2 http://ftpmaster.internal/ubuntu oracular/universe abinit 9.10.4-2ubuntu3 (tar) [131 MB] 109s Get:3 http://ftpmaster.internal/ubuntu oracular/universe abinit 9.10.4-2ubuntu3 (diff) [15.1 kB] 109s gpgv: Signature made Mon Apr 1 04:59:04 2024 UTC 109s gpgv: using RSA key A089FB36AAFBDAD5ACC1325069F790171A210984 109s gpgv: Can't check signature: No public key 109s dpkg-source: warning: cannot verify inline signature for ./abinit_9.10.4-2ubuntu3.dsc: no acceptable signature found 117s autopkgtest [16:14:10]: testing package abinit version 9.10.4-2ubuntu3 117s autopkgtest [16:14:10]: build not needed 906s autopkgtest [16:27:19]: test run-unit-test: preparing testbed 907s Reading package lists... 907s Building dependency tree... 907s Reading state information... 907s Starting pkgProblemResolver with broken count: 0 907s Starting 2 pkgProblemResolver with broken count: 0 907s Done 907s The following additional packages will be installed: 907s abinit abinit-data abinit-doc libaec0 libatomic1 libblas3 907s libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 libhdf5-103-1t64 907s libhdf5-hl-100t64 libhwloc-plugins libhwloc15 liblapack3 libmunge2 907s libnetcdf19t64 libnetcdff7 libopenmpi3t64 libpciaccess0 libpmix2t64 907s librdmacm1t64 libsz2 libxc9 libxnvctrl0 mpi-default-bin ocl-icd-libopencl1 907s openmpi-bin openmpi-common python3-dateutil python3-numpy python3-pandas 907s python3-pandas-lib python3-tz 907s Suggested packages: 907s opencl-icd gfortran | fortran-compiler gcc gfortran python-numpy-doc 907s python3-dev python3-pytest python-pandas-doc python3-statsmodels 907s Recommended packages: 907s python3-scipy python3-matplotlib python3-bottleneck python3-numexpr 907s python3-odf python3-openpyxl python3-bs4 python3-html5lib python3-lxml 907s python3-tables 907s The following NEW packages will be installed: 907s abinit abinit-data abinit-doc autopkgtest-satdep libaec0 libatomic1 libblas3 907s libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 libhdf5-103-1t64 907s libhdf5-hl-100t64 libhwloc-plugins libhwloc15 liblapack3 libmunge2 907s libnetcdf19t64 libnetcdff7 libopenmpi3t64 libpciaccess0 libpmix2t64 907s librdmacm1t64 libsz2 libxc9 libxnvctrl0 mpi-default-bin ocl-icd-libopencl1 907s openmpi-bin openmpi-common python3-dateutil python3-numpy python3-pandas 907s python3-pandas-lib python3-tz 907s 0 upgraded, 34 newly installed, 0 to remove and 0 not upgraded. 907s Need to get 102 MB/102 MB of archives. 907s After this operation, 442 MB of additional disk space will be used. 907s Get:1 /tmp/autopkgtest.6VD5NT/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [740 B] 908s Get:2 http://ftpmaster.internal/ubuntu oracular/main s390x libblas3 s390x 3.12.0-3build1 [245 kB] 908s Get:3 http://ftpmaster.internal/ubuntu oracular/main s390x libgfortran5 s390x 14.1.0-1ubuntu1 [600 kB] 908s Get:4 http://ftpmaster.internal/ubuntu oracular/main s390x liblapack3 s390x 3.12.0-3build1 [2976 kB] 908s Get:5 http://ftpmaster.internal/ubuntu oracular/universe s390x libaec0 s390x 1.1.3-1 [25.7 kB] 908s Get:6 http://ftpmaster.internal/ubuntu oracular/universe s390x libsz2 s390x 1.1.3-1 [5442 B] 908s Get:7 http://ftpmaster.internal/ubuntu oracular/universe s390x libhdf5-103-1t64 s390x 1.10.10+repack-3.1ubuntu4 [1436 kB] 908s Get:8 http://ftpmaster.internal/ubuntu oracular/universe s390x libhdf5-hl-100t64 s390x 1.10.10+repack-3.1ubuntu4 [58.0 kB] 908s Get:9 http://ftpmaster.internal/ubuntu oracular/universe s390x libnetcdf19t64 s390x 1:4.9.2-6 [498 kB] 908s Get:10 http://ftpmaster.internal/ubuntu oracular/universe s390x libnetcdff7 s390x 4.6.0+really4.5.4+ds-3build2 [179 kB] 908s Get:11 http://ftpmaster.internal/ubuntu oracular/main s390x libevent-pthreads-2.1-7t64 s390x 2.1.12-stable-10 [7870 B] 908s Get:12 http://ftpmaster.internal/ubuntu oracular/main s390x libatomic1 s390x 14.1.0-1ubuntu1 [9378 B] 908s Get:13 http://ftpmaster.internal/ubuntu oracular/main s390x librdmacm1t64 s390x 52.0-2 [73.1 kB] 908s Get:14 http://ftpmaster.internal/ubuntu oracular/universe s390x libfabric1 s390x 1.17.0-3build2 [566 kB] 908s Get:15 http://ftpmaster.internal/ubuntu oracular/universe s390x libhwloc15 s390x 2.10.0-1build1 [177 kB] 908s Get:16 http://ftpmaster.internal/ubuntu oracular/universe s390x libmunge2 s390x 0.5.15-4build1 [15.6 kB] 908s Get:17 http://ftpmaster.internal/ubuntu oracular/main s390x libpciaccess0 s390x 0.17-3build1 [19.0 kB] 908s Get:18 http://ftpmaster.internal/ubuntu oracular/main s390x libxnvctrl0 s390x 510.47.03-0ubuntu4 [12.7 kB] 908s Get:19 http://ftpmaster.internal/ubuntu oracular/universe s390x ocl-icd-libopencl1 s390x 2.3.2-1build1 [41.1 kB] 908s Get:20 http://ftpmaster.internal/ubuntu oracular/universe s390x libhwloc-plugins s390x 2.10.0-1build1 [16.3 kB] 908s Get:21 http://ftpmaster.internal/ubuntu oracular/universe s390x libpmix2t64 s390x 5.0.1-4.1build1 [728 kB] 908s Get:22 http://ftpmaster.internal/ubuntu oracular/universe s390x libopenmpi3t64 s390x 4.1.6-7ubuntu2 [2437 kB] 909s Get:23 http://ftpmaster.internal/ubuntu oracular/universe s390x libxc9 s390x 5.2.3-1ubuntu1 [4120 kB] 909s Get:24 http://ftpmaster.internal/ubuntu oracular/universe s390x openmpi-common all 4.1.6-7ubuntu2 [170 kB] 909s Get:25 http://ftpmaster.internal/ubuntu oracular/universe s390x openmpi-bin s390x 4.1.6-7ubuntu2 [84.5 kB] 909s Get:26 http://ftpmaster.internal/ubuntu oracular-proposed/universe s390x mpi-default-bin s390x 1.17 [2296 B] 909s Get:27 http://ftpmaster.internal/ubuntu oracular/universe s390x abinit s390x 9.10.4-2ubuntu3 [39.2 MB] 910s Get:28 http://ftpmaster.internal/ubuntu oracular/universe s390x abinit-data all 9.10.4-2ubuntu3 [34.2 MB] 911s Get:29 http://ftpmaster.internal/ubuntu oracular/universe s390x abinit-doc all 9.10.4-2ubuntu3 [2301 kB] 911s Get:30 http://ftpmaster.internal/ubuntu oracular/main s390x python3-dateutil all 2.9.0-2 [80.3 kB] 911s Get:31 http://ftpmaster.internal/ubuntu oracular/main s390x python3-numpy s390x 1:1.26.4+ds-10 [4090 kB] 912s Get:32 http://ftpmaster.internal/ubuntu oracular/main s390x python3-tz all 2024.1-2 [31.4 kB] 912s Get:33 http://ftpmaster.internal/ubuntu oracular/universe s390x python3-pandas-lib s390x 2.1.4+dfsg-8 [4689 kB] 912s Get:34 http://ftpmaster.internal/ubuntu oracular/universe s390x python3-pandas all 2.1.4+dfsg-8 [3042 kB] 912s Fetched 102 MB in 4s (22.8 MB/s) 912s Selecting previously unselected package libblas3:s390x. 912s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 54702 files and directories currently installed.) 912s Preparing to unpack .../00-libblas3_3.12.0-3build1_s390x.deb ... 912s Unpacking libblas3:s390x (3.12.0-3build1) ... 912s Selecting previously unselected package libgfortran5:s390x. 912s Preparing to unpack .../01-libgfortran5_14.1.0-1ubuntu1_s390x.deb ... 912s Unpacking libgfortran5:s390x (14.1.0-1ubuntu1) ... 912s Selecting previously unselected package liblapack3:s390x. 912s Preparing to unpack .../02-liblapack3_3.12.0-3build1_s390x.deb ... 912s Unpacking liblapack3:s390x (3.12.0-3build1) ... 912s Selecting previously unselected package libaec0:s390x. 912s Preparing to unpack .../03-libaec0_1.1.3-1_s390x.deb ... 912s Unpacking libaec0:s390x (1.1.3-1) ... 912s Selecting previously unselected package libsz2:s390x. 912s Preparing to unpack .../04-libsz2_1.1.3-1_s390x.deb ... 912s Unpacking libsz2:s390x (1.1.3-1) ... 912s Selecting previously unselected package libhdf5-103-1t64:s390x. 912s Preparing to unpack .../05-libhdf5-103-1t64_1.10.10+repack-3.1ubuntu4_s390x.deb ... 912s Unpacking libhdf5-103-1t64:s390x (1.10.10+repack-3.1ubuntu4) ... 912s Selecting previously unselected package libhdf5-hl-100t64:s390x. 912s Preparing to unpack .../06-libhdf5-hl-100t64_1.10.10+repack-3.1ubuntu4_s390x.deb ... 912s Unpacking libhdf5-hl-100t64:s390x (1.10.10+repack-3.1ubuntu4) ... 912s Selecting previously unselected package libnetcdf19t64:s390x. 912s Preparing to unpack .../07-libnetcdf19t64_1%3a4.9.2-6_s390x.deb ... 912s Unpacking libnetcdf19t64:s390x (1:4.9.2-6) ... 912s Selecting previously unselected package libnetcdff7:s390x. 912s Preparing to unpack .../08-libnetcdff7_4.6.0+really4.5.4+ds-3build2_s390x.deb ... 912s Unpacking libnetcdff7:s390x (4.6.0+really4.5.4+ds-3build2) ... 912s Selecting previously unselected package libevent-pthreads-2.1-7t64:s390x. 912s Preparing to unpack .../09-libevent-pthreads-2.1-7t64_2.1.12-stable-10_s390x.deb ... 912s Unpacking libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ... 912s Selecting previously unselected package libatomic1:s390x. 912s Preparing to unpack .../10-libatomic1_14.1.0-1ubuntu1_s390x.deb ... 912s Unpacking libatomic1:s390x (14.1.0-1ubuntu1) ... 912s Selecting previously unselected package librdmacm1t64:s390x. 912s Preparing to unpack .../11-librdmacm1t64_52.0-2_s390x.deb ... 912s Unpacking librdmacm1t64:s390x (52.0-2) ... 912s Selecting previously unselected package libfabric1:s390x. 912s Preparing to unpack .../12-libfabric1_1.17.0-3build2_s390x.deb ... 912s Unpacking libfabric1:s390x (1.17.0-3build2) ... 913s Selecting previously unselected package libhwloc15:s390x. 913s Preparing to unpack .../13-libhwloc15_2.10.0-1build1_s390x.deb ... 913s Unpacking libhwloc15:s390x (2.10.0-1build1) ... 913s Selecting previously unselected package libmunge2:s390x. 913s Preparing to unpack .../14-libmunge2_0.5.15-4build1_s390x.deb ... 913s Unpacking libmunge2:s390x (0.5.15-4build1) ... 913s Selecting previously unselected package libpciaccess0:s390x. 913s Preparing to unpack .../15-libpciaccess0_0.17-3build1_s390x.deb ... 913s Unpacking libpciaccess0:s390x (0.17-3build1) ... 913s Selecting previously unselected package libxnvctrl0:s390x. 913s Preparing to unpack .../16-libxnvctrl0_510.47.03-0ubuntu4_s390x.deb ... 913s Unpacking libxnvctrl0:s390x (510.47.03-0ubuntu4) ... 913s Selecting previously unselected package ocl-icd-libopencl1:s390x. 913s Preparing to unpack .../17-ocl-icd-libopencl1_2.3.2-1build1_s390x.deb ... 913s Unpacking ocl-icd-libopencl1:s390x (2.3.2-1build1) ... 913s Selecting previously unselected package libhwloc-plugins:s390x. 913s Preparing to unpack .../18-libhwloc-plugins_2.10.0-1build1_s390x.deb ... 913s Unpacking libhwloc-plugins:s390x (2.10.0-1build1) ... 913s Selecting previously unselected package libpmix2t64:s390x. 913s Preparing to unpack .../19-libpmix2t64_5.0.1-4.1build1_s390x.deb ... 913s Unpacking libpmix2t64:s390x (5.0.1-4.1build1) ... 913s Selecting previously unselected package libopenmpi3t64:s390x. 913s Preparing to unpack .../20-libopenmpi3t64_4.1.6-7ubuntu2_s390x.deb ... 913s Unpacking libopenmpi3t64:s390x (4.1.6-7ubuntu2) ... 913s Selecting previously unselected package libxc9:s390x. 913s Preparing to unpack .../21-libxc9_5.2.3-1ubuntu1_s390x.deb ... 913s Unpacking libxc9:s390x (5.2.3-1ubuntu1) ... 913s Selecting previously unselected package openmpi-common. 913s Preparing to unpack .../22-openmpi-common_4.1.6-7ubuntu2_all.deb ... 913s Unpacking openmpi-common (4.1.6-7ubuntu2) ... 913s Selecting previously unselected package openmpi-bin. 913s Preparing to unpack .../23-openmpi-bin_4.1.6-7ubuntu2_s390x.deb ... 913s Unpacking openmpi-bin (4.1.6-7ubuntu2) ... 913s Selecting previously unselected package mpi-default-bin. 913s Preparing to unpack .../24-mpi-default-bin_1.17_s390x.deb ... 913s Unpacking mpi-default-bin (1.17) ... 913s Selecting previously unselected package abinit. 913s Preparing to unpack .../25-abinit_9.10.4-2ubuntu3_s390x.deb ... 913s Unpacking abinit (9.10.4-2ubuntu3) ... 914s Selecting previously unselected package abinit-data. 914s Preparing to unpack .../26-abinit-data_9.10.4-2ubuntu3_all.deb ... 914s Unpacking abinit-data (9.10.4-2ubuntu3) ... 915s Selecting previously unselected package abinit-doc. 915s Preparing to unpack .../27-abinit-doc_9.10.4-2ubuntu3_all.deb ... 915s Unpacking abinit-doc (9.10.4-2ubuntu3) ... 915s Selecting previously unselected package python3-dateutil. 915s Preparing to unpack .../28-python3-dateutil_2.9.0-2_all.deb ... 915s Unpacking python3-dateutil (2.9.0-2) ... 915s Selecting previously unselected package python3-numpy. 915s Preparing to unpack .../29-python3-numpy_1%3a1.26.4+ds-10_s390x.deb ... 915s Unpacking python3-numpy (1:1.26.4+ds-10) ... 915s Selecting previously unselected package python3-tz. 915s Preparing to unpack .../30-python3-tz_2024.1-2_all.deb ... 915s Unpacking python3-tz (2024.1-2) ... 915s Selecting previously unselected package python3-pandas-lib:s390x. 915s Preparing to unpack .../31-python3-pandas-lib_2.1.4+dfsg-8_s390x.deb ... 915s Unpacking python3-pandas-lib:s390x (2.1.4+dfsg-8) ... 915s Selecting previously unselected package python3-pandas. 915s Preparing to unpack .../32-python3-pandas_2.1.4+dfsg-8_all.deb ... 915s Unpacking python3-pandas (2.1.4+dfsg-8) ... 916s Selecting previously unselected package autopkgtest-satdep. 916s Preparing to unpack .../33-1-autopkgtest-satdep.deb ... 916s Unpacking autopkgtest-satdep (0) ... 916s Setting up libpciaccess0:s390x (0.17-3build1) ... 916s Setting up libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ... 916s Setting up abinit-doc (9.10.4-2ubuntu3) ... 916s Setting up abinit-data (9.10.4-2ubuntu3) ... 916s Setting up libaec0:s390x (1.1.3-1) ... 916s Setting up python3-tz (2024.1-2) ... 916s Setting up libxnvctrl0:s390x (510.47.03-0ubuntu4) ... 916s Setting up libblas3:s390x (3.12.0-3build1) ... 916s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 916s Setting up libmunge2:s390x (0.5.15-4build1) ... 916s Setting up libhwloc15:s390x (2.10.0-1build1) ... 916s Setting up libatomic1:s390x (14.1.0-1ubuntu1) ... 916s Setting up libgfortran5:s390x (14.1.0-1ubuntu1) ... 916s Setting up ocl-icd-libopencl1:s390x (2.3.2-1build1) ... 916s Setting up openmpi-common (4.1.6-7ubuntu2) ... 916s Setting up librdmacm1t64:s390x (52.0-2) ... 916s Setting up python3-dateutil (2.9.0-2) ... 916s Setting up libsz2:s390x (1.1.3-1) ... 916s Setting up libxc9:s390x (5.2.3-1ubuntu1) ... 916s Setting up libfabric1:s390x (1.17.0-3build2) ... 916s Setting up liblapack3:s390x (3.12.0-3build1) ... 916s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 916s Setting up libhwloc-plugins:s390x (2.10.0-1build1) ... 916s Setting up libpmix2t64:s390x (5.0.1-4.1build1) ... 916s Setting up python3-numpy (1:1.26.4+ds-10) ... 918s Setting up libopenmpi3t64:s390x (4.1.6-7ubuntu2) ... 918s Setting up libhdf5-103-1t64:s390x (1.10.10+repack-3.1ubuntu4) ... 918s Setting up openmpi-bin (4.1.6-7ubuntu2) ... 918s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 918s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 918s Setting up libhdf5-hl-100t64:s390x (1.10.10+repack-3.1ubuntu4) ... 918s Setting up libnetcdf19t64:s390x (1:4.9.2-6) ... 918s Setting up python3-pandas-lib:s390x (2.1.4+dfsg-8) ... 918s Setting up mpi-default-bin (1.17) ... 918s Setting up python3-pandas (2.1.4+dfsg-8) ... 924s Setting up libnetcdff7:s390x (4.6.0+really4.5.4+ds-3build2) ... 924s Setting up abinit (9.10.4-2ubuntu3) ... 924s Setting up autopkgtest-satdep (0) ... 924s Processing triggers for man-db (2.12.1-2) ... 924s Processing triggers for libc-bin (2.39-0ubuntu9) ... 927s (Reading database ... 58878 files and directories currently installed.) 927s Removing autopkgtest-satdep (0) ... 928s autopkgtest [16:27:41]: test run-unit-test: [----------------------- 928s /tmp/autopkgtest.6VD5NT/build.bq7/src/tests/__init__.py:231: SyntaxWarning: invalid escape sequence '\d' 928s pattern = re.compile("-?t" + name + "_\d+\.abi") 928s /tmp/autopkgtest.6VD5NT/build.bq7/src/tests/__init__.py:722: SyntaxWarning: invalid escape sequence '\[' 928s re_slice = re.compile("^\[(\d*):(\d*)\]$") 928s /tmp/autopkgtest.6VD5NT/build.bq7/src/tests/__init__.py:723: SyntaxWarning: invalid escape sequence '\[' 928s re_single = re.compile("^\[(\d*)\]$") 928s /tmp/autopkgtest.6VD5NT/build.bq7/src/tests/pymods/xyaptu.py:37: SyntaxWarning: invalid escape sequence '\+' 928s _reOpen = re.compile('\++yaptu ') 928s /tmp/autopkgtest.6VD5NT/build.bq7/src/tests/pymods/yaptu.py:96: SyntaxWarning: invalid escape sequence '\+' 928s rbe=re.compile('\+') 929s stty: 'standard input': Inappropriate ioctl for device 965s Running on autopkgtest -- system Linux -- ncpus 1 -- Python 3.12.4 -- runtests.py-0.6.0 965s Regenerating database... 965s Saving database to /tmp/autopkgtest.6VD5NT/build.bq7/src/tests/test_suite.cpkl 965s /tmp/tmp.9InyWmKswh directory already exists. Files will be removed 965s Running 26 test(s) with MPI_procs: 1, py_nprocs: 1 965s [fast][t00][np=1][run_etime: 1.24 s]: succeeded [file=t00.abo] 965s [fast][t01][np=1][run_etime: 0.34 s]: succeeded [file=t01.abo] 965s [fast][t02][np=1][run_etime: 1.07 s]: succeeded [file=t02.abo] 965s [fast][t03][np=1][run_etime: 0.90 s]: succeeded [file=t03.abo] 965s [fast][t05][np=1][run_etime: 0.71 s]: succeeded [file=t05.abo] 965s [fast][t06][np=1][run_etime: 0.62 s]: succeeded [file=t06.abo] 965s [fast][t07][np=1][run_etime: 0.69 s]: succeeded [file=t07.abo] 965s [fast][t08][np=1][run_etime: 0.62 s]: succeeded [file=t08.abo] 965s [fast][t09][np=1][run_etime: 0.56 s]: succeeded [file=t09.abo] 965s [fast][t11][np=1][run_etime: 0.63 s]: succeeded [file=t11.abo] 965s [fast][t12][np=1][run_etime: 0.56 s]: succeeded [file=t12.abo] 965s [fast][t14][np=1][run_etime: 0.64 s]: passed: abs error 9.999e-07 < 1.1e-06, rel error 0.0003729 < 0.0004 [file=t14.abo] 965s [fast][t16][np=1][run_etime: 0.65 s]: succeeded [file=t16.abo] 965s [fast][t04][np=1][run_etime: 0.75 s]: succeeded [file=t04.abo] 965s [fast][t17][np=1][run_etime: 0.81 s]: succeeded [file=t17.abo] 965s [fast][t19][np=1][run_etime: 0.84 s]: succeeded [file=t19.abo] 965s [fast][t20][np=1][run_etime: 1.96 s]: succeeded [file=t20.abo] 965s [fast][t21][np=1][run_etime: 4.58 s]: succeeded [file=t21.abo] 965s [fast][t23][np=1][run_etime: 0.90 s]: succeeded [file=t23.abo] 965s [fast][t24][np=1][run_etime: 1.60 s]: succeeded [file=t24.abo] 965s [fast][t25][np=1][run_etime: 1.39 s]: succeeded [file=t25.abo] 965s [fast][t26][np=1][run_etime: 1.32 s]: succeeded [file=t26.abo] 965s [fast][t27][np=1][run_etime: 1.43 s]: succeeded [file=t27.abo] 965s [fast][t28][np=1][run_etime: 2.61 s]: succeeded [file=t28.abo] 965s [fast][t28][np=1][run_etime: 2.61 s]: succeeded [file=t28o_TIM2_GEO] 965s [fast][t29][np=1][run_etime: 7.23 s]: succeeded [file=t29.abo] 965s [fast][t29][np=1][run_etime: 7.23 s]: succeeded [file=t29o_TIM8_GEO] 965s [fast][t30][np=1][run_etime: 0.82 s]: succeeded [file=t30.abo] 965s 965s Suite failed passed succeeded skipped disabled run_etime tot_etime 965s fast 0 1 10 0 0 35.48 35.73 965s 965s Completed in 36.01 [s]. Average time for test=3.23 [s], stdev=3.68 [s] 965s Summary: failed=0, succeeded=10, passed=1, skipped=0, disabled=0 965s 965s Execution completed. 965s Results in HTML format are available in /tmp/tmp.9InyWmKswh/suite_report.html 965s autopkgtest [16:28:18]: test run-unit-test: -----------------------] 966s autopkgtest [16:28:19]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 966s run-unit-test PASS 966s autopkgtest [16:28:19]: @@@@@@@@@@@@@@@@@@@@ summary 966s run-unit-test PASS 978s nova [W] Using flock in scalingstack-bos02-s390x 978s Creating nova instance adt-oracular-s390x-abinit-20240708-161213-juju-7f2275-prod-proposed-migration-environment-2-cb1d0a5c-7659-464b-bf2a-57d92ad36133 from image adt/ubuntu-oracular-s390x-server-20240708.img (UUID 6c20d52a-e434-4209-aeee-6cc89c5ba4cf)...