0s autopkgtest [15:52:49]: starting date and time: 2024-04-08 15:52:49+0000
  0s autopkgtest [15:52:49]: git checkout: 43bc6cdf gitlab-ci: do not include the salsa pipeline
  0s autopkgtest [15:52:49]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.poddbm9h/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-igraph --apt-upgrade r-cran-ggm --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-igraph/2.0.3-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos02-ppc64el-8.secgroup --name adt-noble-ppc64el-r-cran-ggm-20240408-155249-juju-7f2275-prod-proposed-migration-environment-3-2a539a9c-890d-4699-b9ac-37da3b6967d6 --image adt/ubuntu-noble-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
238s autopkgtest [15:56:47]: testbed dpkg architecture: ppc64el
238s autopkgtest [15:56:47]: testbed apt version: 2.7.14build2
238s autopkgtest [15:56:47]: @@@@@@@@@@@@@@@@@@@@ test bed setup
239s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
239s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [11.3 kB]
239s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [94.4 kB]
239s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [4680 B]
239s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [849 kB]
240s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el Packages [110 kB]
240s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el c-n-f Metadata [3116 B]
240s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el Packages [1192 B]
240s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el c-n-f Metadata [116 B]
240s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el Packages [823 kB]
240s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el c-n-f Metadata [8652 B]
240s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el Packages [8876 B]
240s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el c-n-f Metadata [116 B]
244s Fetched 2030 kB in 2s (1151 kB/s)
244s Reading package lists...
246s Reading package lists...
247s Building dependency tree...
247s Reading state information...
247s Calculating upgrade...
247s The following packages will be upgraded:
247s   libpython3.12-minimal libpython3.12-stdlib libsasl2-2 libsasl2-modules
247s   libsasl2-modules-db python3.12 python3.12-minimal
247s 7 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
247s Need to get 6270 kB of archives.
247s After this operation, 570 kB disk space will be freed.
247s Get:1 http://ftpmaster.internal/ubuntu noble/main ppc64el python3.12 ppc64el 3.12.2-5ubuntu3 [644 kB]
248s Get:2 http://ftpmaster.internal/ubuntu noble/main ppc64el libpython3.12-stdlib ppc64el 3.12.2-5ubuntu3 [2123 kB]
249s Get:3 http://ftpmaster.internal/ubuntu noble/main ppc64el python3.12-minimal ppc64el 3.12.2-5ubuntu3 [2495 kB]
250s Get:4 http://ftpmaster.internal/ubuntu noble/main ppc64el libpython3.12-minimal ppc64el 3.12.2-5ubuntu3 [834 kB]
250s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el libsasl2-modules-db ppc64el 2.1.28+dfsg1-5ubuntu3 [23.5 kB]
250s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el libsasl2-2 ppc64el 2.1.28+dfsg1-5ubuntu3 [68.0 kB]
250s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el libsasl2-modules ppc64el 2.1.28+dfsg1-5ubuntu3 [83.2 kB]
250s Fetched 6270 kB in 3s (2442 kB/s)
250s (Reading database ... 
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 103388 files and directories currently installed.)
250s Preparing to unpack .../0-python3.12_3.12.2-5ubuntu3_ppc64el.deb ...
251s Unpacking python3.12 (3.12.2-5ubuntu3) over (3.12.2-4build4) ...
251s Preparing to unpack .../1-libpython3.12-stdlib_3.12.2-5ubuntu3_ppc64el.deb ...
251s Unpacking libpython3.12-stdlib:ppc64el (3.12.2-5ubuntu3) over (3.12.2-4build4) ...
251s Preparing to unpack .../2-python3.12-minimal_3.12.2-5ubuntu3_ppc64el.deb ...
251s Unpacking python3.12-minimal (3.12.2-5ubuntu3) over (3.12.2-4build4) ...
251s Preparing to unpack .../3-libpython3.12-minimal_3.12.2-5ubuntu3_ppc64el.deb ...
251s Unpacking libpython3.12-minimal:ppc64el (3.12.2-5ubuntu3) over (3.12.2-4build4) ...
252s Preparing to unpack .../4-libsasl2-modules-db_2.1.28+dfsg1-5ubuntu3_ppc64el.deb ...
252s Unpacking libsasl2-modules-db:ppc64el (2.1.28+dfsg1-5ubuntu3) over (2.1.28+dfsg1-5ubuntu2) ...
252s Preparing to unpack .../5-libsasl2-2_2.1.28+dfsg1-5ubuntu3_ppc64el.deb ...
252s Unpacking libsasl2-2:ppc64el (2.1.28+dfsg1-5ubuntu3) over (2.1.28+dfsg1-5ubuntu2) ...
252s Preparing to unpack .../6-libsasl2-modules_2.1.28+dfsg1-5ubuntu3_ppc64el.deb ...
252s Unpacking libsasl2-modules:ppc64el (2.1.28+dfsg1-5ubuntu3) over (2.1.28+dfsg1-5ubuntu2) ...
252s Setting up libsasl2-modules:ppc64el (2.1.28+dfsg1-5ubuntu3) ...
252s Setting up libpython3.12-minimal:ppc64el (3.12.2-5ubuntu3) ...
252s Setting up libsasl2-modules-db:ppc64el (2.1.28+dfsg1-5ubuntu3) ...
252s Setting up libsasl2-2:ppc64el (2.1.28+dfsg1-5ubuntu3) ...
252s Setting up python3.12-minimal (3.12.2-5ubuntu3) ...
253s Setting up libpython3.12-stdlib:ppc64el (3.12.2-5ubuntu3) ...
253s Setting up python3.12 (3.12.2-5ubuntu3) ...
254s Processing triggers for systemd (255.4-1ubuntu7) ...
254s Processing triggers for man-db (2.12.0-4build1) ...
256s Processing triggers for libc-bin (2.39-0ubuntu8) ...
256s Reading package lists...
256s Building dependency tree...
256s Reading state information...
256s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
257s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease
257s Get:2 http://ftpmaster.internal/ubuntu noble InRelease [255 kB]
257s Get:3 http://ftpmaster.internal/ubuntu noble-updates InRelease [89.7 kB]
257s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease
257s Get:5 http://ftpmaster.internal/ubuntu noble/main Sources [1368 kB]
258s Get:6 http://ftpmaster.internal/ubuntu noble/universe Sources [19.8 MB]
260s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el Packages [1358 kB]
261s Get:8 http://ftpmaster.internal/ubuntu noble/universe ppc64el Packages [15.3 MB]
267s Fetched 38.1 MB in 10s (3784 kB/s)
268s Reading package lists...
268s Reading package lists...
268s Building dependency tree...
268s Reading state information...
268s Calculating upgrade...
268s The following packages will be upgraded:
268s   grub-common grub-ieee1275 grub-ieee1275-bin grub2-common python3-gi
268s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
268s Need to get 4119 kB of archives.
268s After this operation, 0 B of additional disk space will be used.
268s Get:1 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-gi ppc64el 3.48.2-1 [262 kB]
269s Get:2 http://ftpmaster.internal/ubuntu noble/main ppc64el grub-ieee1275 ppc64el 2.12-1ubuntu7 [63.1 kB]
269s Get:3 http://ftpmaster.internal/ubuntu noble/main ppc64el grub2-common ppc64el 2.12-1ubuntu7 [752 kB]
269s Get:4 http://ftpmaster.internal/ubuntu noble/main ppc64el grub-ieee1275-bin ppc64el 2.12-1ubuntu7 [687 kB]
269s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el grub-common ppc64el 2.12-1ubuntu7 [2356 kB]
269s Preconfiguring packages ...
270s Fetched 4119 kB in 1s (5052 kB/s)
270s (Reading database ... 
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(Reading database ... 75%
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(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 103389 files and directories currently installed.)
270s Preparing to unpack .../python3-gi_3.48.2-1_ppc64el.deb ...
270s Unpacking python3-gi (3.48.2-1) over (3.48.1-1build1) ...
270s Preparing to unpack .../grub-ieee1275_2.12-1ubuntu7_ppc64el.deb ...
270s Unpacking grub-ieee1275 (2.12-1ubuntu7) over (2.12-1ubuntu6) ...
270s Preparing to unpack .../grub2-common_2.12-1ubuntu7_ppc64el.deb ...
270s Unpacking grub2-common (2.12-1ubuntu7) over (2.12-1ubuntu6) ...
270s Preparing to unpack .../grub-ieee1275-bin_2.12-1ubuntu7_ppc64el.deb ...
270s Unpacking grub-ieee1275-bin (2.12-1ubuntu7) over (2.12-1ubuntu6) ...
270s Preparing to unpack .../grub-common_2.12-1ubuntu7_ppc64el.deb ...
270s Unpacking grub-common (2.12-1ubuntu7) over (2.12-1ubuntu6) ...
270s Setting up grub-common (2.12-1ubuntu7) ...
271s Setting up python3-gi (3.48.2-1) ...
271s Setting up grub2-common (2.12-1ubuntu7) ...
271s Setting up grub-ieee1275-bin (2.12-1ubuntu7) ...
271s Setting up grub-ieee1275 (2.12-1ubuntu7) ...
272s Installing for powerpc-ieee1275 platform.
272s Installation finished. No error reported.
272s Sourcing file `/etc/default/grub'
272s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
272s Generating grub configuration file ...
272s Found linux image: /boot/vmlinux-6.8.0-22-generic
272s Found initrd image: /boot/initrd.img-6.8.0-22-generic
272s Found linux image: /boot/vmlinux-6.8.0-11-generic
272s Found initrd image: /boot/initrd.img-6.8.0-11-generic
272s Warning: os-prober will not be executed to detect other bootable partitions.
272s Systems on them will not be added to the GRUB boot configuration.
272s Check GRUB_DISABLE_OS_PROBER documentation entry.
272s Adding boot menu entry for UEFI Firmware Settings ...
272s done
272s Processing triggers for install-info (7.1-3build2) ...
273s Processing triggers for man-db (2.12.0-4build1) ...
274s Reading package lists...
274s Building dependency tree...
274s Reading state information...
274s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
274s autopkgtest [15:57:23]: rebooting testbed after setup commands that affected boot
458s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds...
470s autopkgtest [16:00:39]: testbed running kernel: Linux 6.8.0-22-generic #22-Ubuntu SMP Thu Apr  4 22:47:57 UTC 2024
473s autopkgtest [16:00:42]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-ggm
475s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-cran-ggm 2.5.1-1 (dsc) [2094 B]
475s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-cran-ggm 2.5.1-1 (tar) [78.0 kB]
475s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-cran-ggm 2.5.1-1 (diff) [2332 B]
475s gpgv: Signature made Mon Jan 29 20:43:29 2024 UTC
475s gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
475s gpgv:                issuer "tille@debian.org"
475s gpgv: Can't check signature: No public key
475s dpkg-source: warning: cannot verify inline signature for ./r-cran-ggm_2.5.1-1.dsc: no acceptable signature found
475s autopkgtest [16:00:44]: testing package r-cran-ggm version 2.5.1-1
476s autopkgtest [16:00:45]: build not needed
477s autopkgtest [16:00:46]: test pkg-r-autopkgtest: preparing testbed
478s Reading package lists...
478s Building dependency tree...
478s Reading state information...
478s Starting pkgProblemResolver with broken count: 0
478s Starting 2 pkgProblemResolver with broken count: 0
478s Done
478s The following additional packages will be installed:
478s   build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu
478s   cpp-powerpc64le-linux-gnu dctrl-tools fontconfig g++ g++-13
478s   g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-13
478s   gcc-13-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gfortran gfortran-13
478s   gfortran-13-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu
478s   icu-devtools libamd3 libasan8 libatomic1 libblas-dev libblas3 libbz2-dev
478s   libcairo2 libcc1-0 libcolamd3 libdatrie1 libgcc-13-dev libgfortran-13-dev
478s   libgfortran5 libglpk40 libgomp1 libgraphite2-3 libharfbuzz0b libice6
478s   libicu-dev libisl23 libitm1 libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev
478s   liblapack-dev liblapack3 liblsan0 libltdl7 liblzma-dev libmpc3
478s   libncurses-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
478s   libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev
478s   libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libquadmath0
478s   libreadline-dev libsm6 libstdc++-13-dev libsuitesparseconfig7 libtcl8.6
478s   libthai-data libthai0 libtk8.6 libtsan2 libubsan1 libxcb-render0 libxcb-shm0
478s   libxft2 libxrender1 libxss1 libxt6t64 pkg-config pkg-r-autopkgtest pkgconf
478s   pkgconf-bin r-base-core r-base-dev r-bioc-biocgenerics r-bioc-graph
478s   r-cran-biocmanager r-cran-cli r-cran-cpp11 r-cran-ggm r-cran-glue
478s   r-cran-igraph r-cran-lattice r-cran-lifecycle r-cran-magrittr r-cran-matrix
478s   r-cran-pkgconfig r-cran-rlang r-cran-vctrs unzip x11-common xdg-utils zip
478s   zlib1g-dev
478s Suggested packages:
478s   cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib
478s   manpages-dev autoconf automake libtool flex bison gdb gcc-doc
478s   gdb-powerpc64le-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev
478s   liblapack-doc libiodbc2-dev default-libmysqlclient-dev icu-doc liblzma-doc
478s   ncurses-doc readline-doc libstdc++-13-doc tcl8.6 tk8.6 elpa-ess r-doc-info
478s   | r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
478s   texlive-plain-generic texlive-fonts-recommended texlive-fonts-extra
478s   texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
478s   r-bioc-biobase r-bioc-s4vectors r-bioc-iranges r-bioc-genomicranges
478s   r-bioc-delayedarray r-bioc-biostrings r-bioc-rsamtools r-bioc-annotationdbi
478s   r-bioc-affy r-bioc-deseq2 r-bioc-annotate r-cran-runit r-cran-sparsem
478s   r-cran-xml r-bioc-rbgl r-cran-cluster r-bioc-biocstyle r-cran-knitr
478s   r-cran-covr r-cran-rmarkdown r-cran-testthat
478s Recommended packages:
478s   bzip2-doc libpng-tools r-recommended r-doc-html r-bioc-biocversion
478s   r-cran-remotes r-cran-rmarkdown r-cran-testthat r-cran-withr r-cran-curl
478s   r-cran-knitr r-cran-callr r-cran-covr r-cran-crayon r-cran-digest
478s   r-cran-htmltools r-cran-htmlwidgets r-cran-mockery r-cran-processx r-cran-ps
478s   r-cran-rprojroot r-cran-rstudioapi r-cran-tibble r-cran-whoami r-cran-bench
478s   r-cran-brio r-cran-decor r-cran-desc r-cran-ggplot2 r-cran-lobstr
478s   r-cran-progress r-cran-scales r-cran-rcpp r-cran-dbi r-cran-dplyr
478s   r-cran-rsqlite r-cran-waldo r-cran-ape r-cran-rgl r-cran-vdiffr r-cran-lintr
478s   r-cran-tidyverse r-cran-fs r-cran-pillar r-cran-usethis r-cran-bit64
478s   r-cran-generics r-cran-pkgdown r-cran-xml2 r-cran-zeallot
478s   libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
478s   x11-xserver-utils
478s The following NEW packages will be installed:
478s   autopkgtest-satdep build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu
478s   cpp-powerpc64le-linux-gnu dctrl-tools fontconfig g++ g++-13
478s   g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-13
478s   gcc-13-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gfortran gfortran-13
478s   gfortran-13-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu
478s   icu-devtools libamd3 libasan8 libatomic1 libblas-dev libblas3 libbz2-dev
478s   libcairo2 libcc1-0 libcolamd3 libdatrie1 libgcc-13-dev libgfortran-13-dev
478s   libgfortran5 libglpk40 libgomp1 libgraphite2-3 libharfbuzz0b libice6
478s   libicu-dev libisl23 libitm1 libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev
478s   liblapack-dev liblapack3 liblsan0 libltdl7 liblzma-dev libmpc3
478s   libncurses-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
478s   libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev
478s   libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libquadmath0
478s   libreadline-dev libsm6 libstdc++-13-dev libsuitesparseconfig7 libtcl8.6
478s   libthai-data libthai0 libtk8.6 libtsan2 libubsan1 libxcb-render0 libxcb-shm0
478s   libxft2 libxrender1 libxss1 libxt6t64 pkg-config pkg-r-autopkgtest pkgconf
478s   pkgconf-bin r-base-core r-base-dev r-bioc-biocgenerics r-bioc-graph
478s   r-cran-biocmanager r-cran-cli r-cran-cpp11 r-cran-ggm r-cran-glue
478s   r-cran-igraph r-cran-lattice r-cran-lifecycle r-cran-magrittr r-cran-matrix
478s   r-cran-pkgconfig r-cran-rlang r-cran-vctrs unzip x11-common xdg-utils zip
478s   zlib1g-dev
478s 0 upgraded, 107 newly installed, 0 to remove and 0 not upgraded.
478s Need to get 148 MB/148 MB of archives.
478s After this operation, 470 MB of additional disk space will be used.
478s Get:1 /tmp/autopkgtest.nIYy8O/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [720 B]
479s Get:2 http://ftpmaster.internal/ubuntu noble/main ppc64el libisl23 ppc64el 0.26-3 [864 kB]
479s Get:3 http://ftpmaster.internal/ubuntu noble/main ppc64el libmpc3 ppc64el 1.3.1-1 [61.2 kB]
479s Get:4 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-13-powerpc64le-linux-gnu ppc64el 13.2.0-23ubuntu3 [10.7 MB]
482s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-13 ppc64el 13.2.0-23ubuntu3 [1036 B]
482s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [5330 B]
482s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp ppc64el 4:13.2.0-7ubuntu1 [22.5 kB]
482s Get:8 http://ftpmaster.internal/ubuntu noble/main ppc64el libcc1-0 ppc64el 14-20240330-1ubuntu2 [48.4 kB]
482s Get:9 http://ftpmaster.internal/ubuntu noble/main ppc64el libgomp1 ppc64el 14-20240330-1ubuntu2 [161 kB]
482s Get:10 http://ftpmaster.internal/ubuntu noble/main ppc64el libitm1 ppc64el 14-20240330-1ubuntu2 [32.3 kB]
482s Get:11 http://ftpmaster.internal/ubuntu noble/main ppc64el libatomic1 ppc64el 14-20240330-1ubuntu2 [10.7 kB]
482s Get:12 http://ftpmaster.internal/ubuntu noble/main ppc64el libasan8 ppc64el 14-20240330-1ubuntu2 [2973 kB]
482s Get:13 http://ftpmaster.internal/ubuntu noble/main ppc64el liblsan0 ppc64el 14-20240330-1ubuntu2 [1325 kB]
482s Get:14 http://ftpmaster.internal/ubuntu noble/main ppc64el libtsan2 ppc64el 14-20240330-1ubuntu2 [2700 kB]
483s Get:15 http://ftpmaster.internal/ubuntu noble/main ppc64el libubsan1 ppc64el 14-20240330-1ubuntu2 [1194 kB]
483s Get:16 http://ftpmaster.internal/ubuntu noble/main ppc64el libquadmath0 ppc64el 14-20240330-1ubuntu2 [158 kB]
483s Get:17 http://ftpmaster.internal/ubuntu noble/main ppc64el libgcc-13-dev ppc64el 13.2.0-23ubuntu3 [1579 kB]
483s Get:18 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-13-powerpc64le-linux-gnu ppc64el 13.2.0-23ubuntu3 [20.6 MB]
486s Get:19 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-13 ppc64el 13.2.0-23ubuntu3 [479 kB]
486s Get:20 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [1224 B]
486s Get:21 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc ppc64el 4:13.2.0-7ubuntu1 [5022 B]
486s Get:22 http://ftpmaster.internal/ubuntu noble/main ppc64el libstdc++-13-dev ppc64el 13.2.0-23ubuntu3 [2510 kB]
486s Get:23 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-13-powerpc64le-linux-gnu ppc64el 13.2.0-23ubuntu3 [12.2 MB]
488s Get:24 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-13 ppc64el 13.2.0-23ubuntu3 [14.5 kB]
488s Get:25 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [968 B]
488s Get:26 http://ftpmaster.internal/ubuntu noble/main ppc64el g++ ppc64el 4:13.2.0-7ubuntu1 [1086 B]
488s Get:27 http://ftpmaster.internal/ubuntu noble/main ppc64el build-essential ppc64el 12.10ubuntu1 [4936 B]
488s Get:28 http://ftpmaster.internal/ubuntu noble/main ppc64el dctrl-tools ppc64el 2.24-3build2 [70.6 kB]
488s Get:29 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig ppc64el 2.15.0-1.1ubuntu2 [192 kB]
488s Get:30 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran5 ppc64el 14-20240330-1ubuntu2 [575 kB]
488s Get:31 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran-13-dev ppc64el 13.2.0-23ubuntu3 [604 kB]
488s Get:32 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-13-powerpc64le-linux-gnu ppc64el 13.2.0-23ubuntu3 [11.2 MB]
489s Get:33 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-13 ppc64el 13.2.0-23ubuntu3 [10.9 kB]
489s Get:34 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [1030 B]
489s Get:35 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran ppc64el 4:13.2.0-7ubuntu1 [1170 B]
489s Get:36 http://ftpmaster.internal/ubuntu noble/main ppc64el icu-devtools ppc64el 74.2-1ubuntu1 [246 kB]
489s Get:37 http://ftpmaster.internal/ubuntu noble/main ppc64el libsuitesparseconfig7 ppc64el 1:7.6.1+dfsg-1build1 [12.9 kB]
489s Get:38 http://ftpmaster.internal/ubuntu noble/universe ppc64el libamd3 ppc64el 1:7.6.1+dfsg-1build1 [36.6 kB]
489s Get:39 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas3 ppc64el 3.12.0-3 [227 kB]
489s Get:40 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas-dev ppc64el 3.12.0-3 [301 kB]
489s Get:41 http://ftpmaster.internal/ubuntu noble/main ppc64el libbz2-dev ppc64el 1.0.8-5ubuntu1 [51.2 kB]
489s Get:42 http://ftpmaster.internal/ubuntu noble/main ppc64el libpixman-1-0 ppc64el 0.42.2-1 [300 kB]
489s Get:43 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-render0 ppc64el 1.15-1 [17.2 kB]
489s Get:44 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-shm0 ppc64el 1.15-1 [5896 B]
489s Get:45 http://ftpmaster.internal/ubuntu noble/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1 [23.3 kB]
489s Get:46 http://ftpmaster.internal/ubuntu noble/main ppc64el libcairo2 ppc64el 1.18.0-3 [751 kB]
489s Get:47 http://ftpmaster.internal/ubuntu noble/main ppc64el libcolamd3 ppc64el 1:7.6.1+dfsg-1build1 [21.6 kB]
489s Get:48 http://ftpmaster.internal/ubuntu noble/main ppc64el libdatrie1 ppc64el 0.2.13-3 [25.1 kB]
489s Get:49 http://ftpmaster.internal/ubuntu noble/main ppc64el libltdl7 ppc64el 2.4.7-7 [48.0 kB]
489s Get:50 http://ftpmaster.internal/ubuntu noble/universe ppc64el libglpk40 ppc64el 5.0-1build1 [459 kB]
489s Get:51 http://ftpmaster.internal/ubuntu noble/main ppc64el libgraphite2-3 ppc64el 1.3.14-2 [105 kB]
489s Get:52 http://ftpmaster.internal/ubuntu noble/main ppc64el libharfbuzz0b ppc64el 8.3.0-2build2 [580 kB]
490s Get:53 http://ftpmaster.internal/ubuntu noble/main ppc64el x11-common all 1:7.7+23ubuntu2 [23.4 kB]
490s Get:54 http://ftpmaster.internal/ubuntu noble/main ppc64el libice6 ppc64el 2:1.0.10-1build2 [49.3 kB]
490s Get:55 http://ftpmaster.internal/ubuntu noble/main ppc64el libicu-dev ppc64el 74.2-1ubuntu1 [12.5 MB]
491s Get:56 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8-dev ppc64el 2.1.5-2ubuntu1 [357 kB]
491s Get:57 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8-dev ppc64el 8c-2ubuntu11 [1484 B]
491s Get:58 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-dev ppc64el 8c-2ubuntu11 [1486 B]
491s Get:59 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack3 ppc64el 3.12.0-3 [2804 kB]
492s Get:60 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack-dev ppc64el 3.12.0-3 [6100 kB]
493s Get:61 http://ftpmaster.internal/ubuntu noble/main ppc64el libncurses-dev ppc64el 6.4+20240113-1ubuntu1 [485 kB]
493s Get:62 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai-data all 0.1.29-2 [158 kB]
493s Get:63 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai0 ppc64el 0.1.29-2 [21.4 kB]
493s Get:64 http://ftpmaster.internal/ubuntu noble/main ppc64el libpango-1.0-0 ppc64el 1.52.1+ds-1build1 [271 kB]
493s Get:65 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangoft2-1.0-0 ppc64el 1.52.1+ds-1build1 [50.5 kB]
493s Get:66 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangocairo-1.0-0 ppc64el 1.52.1+ds-1build1 [31.1 kB]
493s Get:67 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper1 ppc64el 1.1.29 [13.5 kB]
493s Get:68 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper-utils ppc64el 1.1.29 [8710 B]
493s Get:69 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-16-0 ppc64el 10.42-4ubuntu1 [245 kB]
493s Get:70 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-32-0 ppc64el 10.42-4ubuntu1 [228 kB]
493s Get:71 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-posix3 ppc64el 10.42-4ubuntu1 [7016 B]
493s Get:72 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-dev ppc64el 10.42-4ubuntu1 [794 kB]
493s Get:73 http://ftpmaster.internal/ubuntu noble/main ppc64el libpkgconf3 ppc64el 1.8.1-2 [36.9 kB]
493s Get:74 http://ftpmaster.internal/ubuntu noble/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg-3.1ubuntu2 [902 kB]
493s Get:75 http://ftpmaster.internal/ubuntu noble/main ppc64el libpng-dev ppc64el 1.6.43-5build1 [328 kB]
493s Get:76 http://ftpmaster.internal/ubuntu noble/main ppc64el libreadline-dev ppc64el 8.2-4build1 [230 kB]
493s Get:77 http://ftpmaster.internal/ubuntu noble/main ppc64el libsm6 ppc64el 2:1.2.3-1build2 [18.5 kB]
493s Get:78 http://ftpmaster.internal/ubuntu noble/main ppc64el libtcl8.6 ppc64el 8.6.14+dfsg-1build1 [1204 kB]
493s Get:79 http://ftpmaster.internal/ubuntu noble/main ppc64el libxft2 ppc64el 2.3.6-1 [59.8 kB]
493s Get:80 http://ftpmaster.internal/ubuntu noble/main ppc64el libxss1 ppc64el 1:1.2.3-1build2 [8982 B]
493s Get:81 http://ftpmaster.internal/ubuntu noble/main ppc64el libtk8.6 ppc64el 8.6.14-1build1 [944 kB]
493s Get:82 http://ftpmaster.internal/ubuntu noble/main ppc64el libxt6t64 ppc64el 1:1.2.1-1.2build1 [202 kB]
493s Get:83 http://ftpmaster.internal/ubuntu noble/main ppc64el pkgconf-bin ppc64el 1.8.1-2 [22.0 kB]
493s Get:84 http://ftpmaster.internal/ubuntu noble/main ppc64el pkgconf ppc64el 1.8.1-2 [16.7 kB]
493s Get:85 http://ftpmaster.internal/ubuntu noble/main ppc64el pkg-config ppc64el 1.8.1-2 [7170 B]
493s Get:86 http://ftpmaster.internal/ubuntu noble/main ppc64el zip ppc64el 3.0-13 [192 kB]
493s Get:87 http://ftpmaster.internal/ubuntu noble/main ppc64el unzip ppc64el 6.0-28ubuntu3 [192 kB]
493s Get:88 http://ftpmaster.internal/ubuntu noble/main ppc64el xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB]
493s Get:89 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-core ppc64el 4.3.3-2build2 [27.4 MB]
497s Get:90 http://ftpmaster.internal/ubuntu noble/main ppc64el liblzma-dev ppc64el 5.6.1+really5.4.5-1 [207 kB]
497s Get:91 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-dev all 4.3.3-2build2 [4334 B]
497s Get:92 http://ftpmaster.internal/ubuntu noble/universe ppc64el pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
497s Get:93 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocgenerics all 0.48.1-2 [595 kB]
497s Get:94 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-graph ppc64el 1.80.0-1 [1290 kB]
498s Get:95 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB]
498s Get:96 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cli ppc64el 3.6.2-1 [1405 kB]
498s Get:97 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cpp11 all 0.4.7-1 [266 kB]
498s Get:98 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-glue ppc64el 1.7.0-1 [155 kB]
498s Get:99 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rlang ppc64el 1.1.3-1 [1696 kB]
498s Get:100 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
498s Get:101 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-magrittr ppc64el 2.0.3-1 [154 kB]
498s Get:102 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lattice ppc64el 0.22-5-1 [1343 kB]
498s Get:103 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-matrix ppc64el 1.6-5-1 [4057 kB]
500s Get:104 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB]
500s Get:105 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-vctrs ppc64el 0.6.5-1 [1399 kB]
500s Get:106 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el r-cran-igraph ppc64el 2.0.3-1 [5374 kB]
501s Get:107 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-ggm all 2.5.1-1 [440 kB]
501s Preconfiguring packages ...
501s Fetched 148 MB in 23s (6576 kB/s)
501s Selecting previously unselected package libisl23:ppc64el.
502s (Reading database ... 
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 103389 files and directories currently installed.)
502s Preparing to unpack .../000-libisl23_0.26-3_ppc64el.deb ...
502s Unpacking libisl23:ppc64el (0.26-3) ...
502s Selecting previously unselected package libmpc3:ppc64el.
502s Preparing to unpack .../001-libmpc3_1.3.1-1_ppc64el.deb ...
502s Unpacking libmpc3:ppc64el (1.3.1-1) ...
502s Selecting previously unselected package cpp-13-powerpc64le-linux-gnu.
502s Preparing to unpack .../002-cpp-13-powerpc64le-linux-gnu_13.2.0-23ubuntu3_ppc64el.deb ...
502s Unpacking cpp-13-powerpc64le-linux-gnu (13.2.0-23ubuntu3) ...
502s Selecting previously unselected package cpp-13.
502s Preparing to unpack .../003-cpp-13_13.2.0-23ubuntu3_ppc64el.deb ...
502s Unpacking cpp-13 (13.2.0-23ubuntu3) ...
502s Selecting previously unselected package cpp-powerpc64le-linux-gnu.
502s Preparing to unpack .../004-cpp-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ...
502s Unpacking cpp-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ...
502s Selecting previously unselected package cpp.
502s Preparing to unpack .../005-cpp_4%3a13.2.0-7ubuntu1_ppc64el.deb ...
502s Unpacking cpp (4:13.2.0-7ubuntu1) ...
502s Selecting previously unselected package libcc1-0:ppc64el.
502s Preparing to unpack .../006-libcc1-0_14-20240330-1ubuntu2_ppc64el.deb ...
502s Unpacking libcc1-0:ppc64el (14-20240330-1ubuntu2) ...
502s Selecting previously unselected package libgomp1:ppc64el.
502s Preparing to unpack .../007-libgomp1_14-20240330-1ubuntu2_ppc64el.deb ...
502s Unpacking libgomp1:ppc64el (14-20240330-1ubuntu2) ...
502s Selecting previously unselected package libitm1:ppc64el.
502s Preparing to unpack .../008-libitm1_14-20240330-1ubuntu2_ppc64el.deb ...
502s Unpacking libitm1:ppc64el (14-20240330-1ubuntu2) ...
502s Selecting previously unselected package libatomic1:ppc64el.
502s Preparing to unpack .../009-libatomic1_14-20240330-1ubuntu2_ppc64el.deb ...
502s Unpacking libatomic1:ppc64el (14-20240330-1ubuntu2) ...
502s Selecting previously unselected package libasan8:ppc64el.
502s Preparing to unpack .../010-libasan8_14-20240330-1ubuntu2_ppc64el.deb ...
502s Unpacking libasan8:ppc64el (14-20240330-1ubuntu2) ...
502s Selecting previously unselected package liblsan0:ppc64el.
502s Preparing to unpack .../011-liblsan0_14-20240330-1ubuntu2_ppc64el.deb ...
502s Unpacking liblsan0:ppc64el (14-20240330-1ubuntu2) ...
502s Selecting previously unselected package libtsan2:ppc64el.
502s Preparing to unpack .../012-libtsan2_14-20240330-1ubuntu2_ppc64el.deb ...
502s Unpacking libtsan2:ppc64el (14-20240330-1ubuntu2) ...
502s Selecting previously unselected package libubsan1:ppc64el.
502s Preparing to unpack .../013-libubsan1_14-20240330-1ubuntu2_ppc64el.deb ...
502s Unpacking libubsan1:ppc64el (14-20240330-1ubuntu2) ...
502s Selecting previously unselected package libquadmath0:ppc64el.
502s Preparing to unpack .../014-libquadmath0_14-20240330-1ubuntu2_ppc64el.deb ...
502s Unpacking libquadmath0:ppc64el (14-20240330-1ubuntu2) ...
502s Selecting previously unselected package libgcc-13-dev:ppc64el.
502s Preparing to unpack .../015-libgcc-13-dev_13.2.0-23ubuntu3_ppc64el.deb ...
502s Unpacking libgcc-13-dev:ppc64el (13.2.0-23ubuntu3) ...
502s Selecting previously unselected package gcc-13-powerpc64le-linux-gnu.
502s Preparing to unpack .../016-gcc-13-powerpc64le-linux-gnu_13.2.0-23ubuntu3_ppc64el.deb ...
502s Unpacking gcc-13-powerpc64le-linux-gnu (13.2.0-23ubuntu3) ...
503s Selecting previously unselected package gcc-13.
503s Preparing to unpack .../017-gcc-13_13.2.0-23ubuntu3_ppc64el.deb ...
503s Unpacking gcc-13 (13.2.0-23ubuntu3) ...
503s Selecting previously unselected package gcc-powerpc64le-linux-gnu.
503s Preparing to unpack .../018-gcc-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ...
503s Unpacking gcc-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ...
503s Selecting previously unselected package gcc.
503s Preparing to unpack .../019-gcc_4%3a13.2.0-7ubuntu1_ppc64el.deb ...
503s Unpacking gcc (4:13.2.0-7ubuntu1) ...
503s Selecting previously unselected package libstdc++-13-dev:ppc64el.
503s Preparing to unpack .../020-libstdc++-13-dev_13.2.0-23ubuntu3_ppc64el.deb ...
503s Unpacking libstdc++-13-dev:ppc64el (13.2.0-23ubuntu3) ...
503s Selecting previously unselected package g++-13-powerpc64le-linux-gnu.
503s Preparing to unpack .../021-g++-13-powerpc64le-linux-gnu_13.2.0-23ubuntu3_ppc64el.deb ...
503s Unpacking g++-13-powerpc64le-linux-gnu (13.2.0-23ubuntu3) ...
504s Selecting previously unselected package g++-13.
504s Preparing to unpack .../022-g++-13_13.2.0-23ubuntu3_ppc64el.deb ...
504s Unpacking g++-13 (13.2.0-23ubuntu3) ...
504s Selecting previously unselected package g++-powerpc64le-linux-gnu.
504s Preparing to unpack .../023-g++-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ...
504s Unpacking g++-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ...
504s Selecting previously unselected package g++.
504s Preparing to unpack .../024-g++_4%3a13.2.0-7ubuntu1_ppc64el.deb ...
504s Unpacking g++ (4:13.2.0-7ubuntu1) ...
504s Selecting previously unselected package build-essential.
504s Preparing to unpack .../025-build-essential_12.10ubuntu1_ppc64el.deb ...
504s Unpacking build-essential (12.10ubuntu1) ...
504s Selecting previously unselected package dctrl-tools.
504s Preparing to unpack .../026-dctrl-tools_2.24-3build2_ppc64el.deb ...
504s Unpacking dctrl-tools (2.24-3build2) ...
504s Selecting previously unselected package fontconfig.
504s Preparing to unpack .../027-fontconfig_2.15.0-1.1ubuntu2_ppc64el.deb ...
504s Unpacking fontconfig (2.15.0-1.1ubuntu2) ...
504s Selecting previously unselected package libgfortran5:ppc64el.
504s Preparing to unpack .../028-libgfortran5_14-20240330-1ubuntu2_ppc64el.deb ...
504s Unpacking libgfortran5:ppc64el (14-20240330-1ubuntu2) ...
504s Selecting previously unselected package libgfortran-13-dev:ppc64el.
504s Preparing to unpack .../029-libgfortran-13-dev_13.2.0-23ubuntu3_ppc64el.deb ...
504s Unpacking libgfortran-13-dev:ppc64el (13.2.0-23ubuntu3) ...
504s Selecting previously unselected package gfortran-13-powerpc64le-linux-gnu.
504s Preparing to unpack .../030-gfortran-13-powerpc64le-linux-gnu_13.2.0-23ubuntu3_ppc64el.deb ...
504s Unpacking gfortran-13-powerpc64le-linux-gnu (13.2.0-23ubuntu3) ...
504s Selecting previously unselected package gfortran-13.
504s Preparing to unpack .../031-gfortran-13_13.2.0-23ubuntu3_ppc64el.deb ...
504s Unpacking gfortran-13 (13.2.0-23ubuntu3) ...
504s Selecting previously unselected package gfortran-powerpc64le-linux-gnu.
504s Preparing to unpack .../032-gfortran-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ...
504s Unpacking gfortran-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ...
504s Selecting previously unselected package gfortran.
504s Preparing to unpack .../033-gfortran_4%3a13.2.0-7ubuntu1_ppc64el.deb ...
504s Unpacking gfortran (4:13.2.0-7ubuntu1) ...
504s Selecting previously unselected package icu-devtools.
504s Preparing to unpack .../034-icu-devtools_74.2-1ubuntu1_ppc64el.deb ...
504s Unpacking icu-devtools (74.2-1ubuntu1) ...
504s Selecting previously unselected package libsuitesparseconfig7:ppc64el.
504s Preparing to unpack .../035-libsuitesparseconfig7_1%3a7.6.1+dfsg-1build1_ppc64el.deb ...
504s Unpacking libsuitesparseconfig7:ppc64el (1:7.6.1+dfsg-1build1) ...
504s Selecting previously unselected package libamd3:ppc64el.
504s Preparing to unpack .../036-libamd3_1%3a7.6.1+dfsg-1build1_ppc64el.deb ...
504s Unpacking libamd3:ppc64el (1:7.6.1+dfsg-1build1) ...
504s Selecting previously unselected package libblas3:ppc64el.
504s Preparing to unpack .../037-libblas3_3.12.0-3_ppc64el.deb ...
504s Unpacking libblas3:ppc64el (3.12.0-3) ...
504s Selecting previously unselected package libblas-dev:ppc64el.
504s Preparing to unpack .../038-libblas-dev_3.12.0-3_ppc64el.deb ...
504s Unpacking libblas-dev:ppc64el (3.12.0-3) ...
504s Selecting previously unselected package libbz2-dev:ppc64el.
504s Preparing to unpack .../039-libbz2-dev_1.0.8-5ubuntu1_ppc64el.deb ...
504s Unpacking libbz2-dev:ppc64el (1.0.8-5ubuntu1) ...
504s Selecting previously unselected package libpixman-1-0:ppc64el.
504s Preparing to unpack .../040-libpixman-1-0_0.42.2-1_ppc64el.deb ...
504s Unpacking libpixman-1-0:ppc64el (0.42.2-1) ...
504s Selecting previously unselected package libxcb-render0:ppc64el.
505s Preparing to unpack .../041-libxcb-render0_1.15-1_ppc64el.deb ...
505s Unpacking libxcb-render0:ppc64el (1.15-1) ...
505s Selecting previously unselected package libxcb-shm0:ppc64el.
505s Preparing to unpack .../042-libxcb-shm0_1.15-1_ppc64el.deb ...
505s Unpacking libxcb-shm0:ppc64el (1.15-1) ...
505s Selecting previously unselected package libxrender1:ppc64el.
505s Preparing to unpack .../043-libxrender1_1%3a0.9.10-1.1_ppc64el.deb ...
505s Unpacking libxrender1:ppc64el (1:0.9.10-1.1) ...
505s Selecting previously unselected package libcairo2:ppc64el.
505s Preparing to unpack .../044-libcairo2_1.18.0-3_ppc64el.deb ...
505s Unpacking libcairo2:ppc64el (1.18.0-3) ...
505s Selecting previously unselected package libcolamd3:ppc64el.
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505s Selecting previously unselected package libdatrie1:ppc64el.
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505s Selecting previously unselected package libltdl7:ppc64el.
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505s Unpacking libltdl7:ppc64el (2.4.7-7) ...
505s Selecting previously unselected package libglpk40:ppc64el.
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505s Selecting previously unselected package libgraphite2-3:ppc64el.
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505s Unpacking libgraphite2-3:ppc64el (1.3.14-2) ...
505s Selecting previously unselected package libharfbuzz0b:ppc64el.
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505s Selecting previously unselected package x11-common.
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505s Selecting previously unselected package libice6:ppc64el.
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505s Selecting previously unselected package libicu-dev:ppc64el.
505s Preparing to unpack .../053-libicu-dev_74.2-1ubuntu1_ppc64el.deb ...
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505s Selecting previously unselected package libjpeg-turbo8-dev:ppc64el.
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505s Selecting previously unselected package libjpeg8-dev:ppc64el.
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505s Selecting previously unselected package libjpeg-dev:ppc64el.
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505s Selecting previously unselected package liblapack3:ppc64el.
505s Preparing to unpack .../057-liblapack3_3.12.0-3_ppc64el.deb ...
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505s Selecting previously unselected package liblapack-dev:ppc64el.
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506s Selecting previously unselected package libncurses-dev:ppc64el.
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506s Selecting previously unselected package libthai-data.
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506s Selecting previously unselected package libthai0:ppc64el.
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506s Selecting previously unselected package libpango-1.0-0:ppc64el.
506s Preparing to unpack .../062-libpango-1.0-0_1.52.1+ds-1build1_ppc64el.deb ...
506s Unpacking libpango-1.0-0:ppc64el (1.52.1+ds-1build1) ...
506s Selecting previously unselected package libpangoft2-1.0-0:ppc64el.
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506s Unpacking libpangoft2-1.0-0:ppc64el (1.52.1+ds-1build1) ...
506s Selecting previously unselected package libpangocairo-1.0-0:ppc64el.
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506s Unpacking libpangocairo-1.0-0:ppc64el (1.52.1+ds-1build1) ...
506s Selecting previously unselected package libpaper1:ppc64el.
506s Preparing to unpack .../065-libpaper1_1.1.29_ppc64el.deb ...
506s Unpacking libpaper1:ppc64el (1.1.29) ...
506s Selecting previously unselected package libpaper-utils.
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506s Selecting previously unselected package libpcre2-16-0:ppc64el.
506s Preparing to unpack .../067-libpcre2-16-0_10.42-4ubuntu1_ppc64el.deb ...
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506s Selecting previously unselected package libpcre2-32-0:ppc64el.
506s Preparing to unpack .../068-libpcre2-32-0_10.42-4ubuntu1_ppc64el.deb ...
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506s Selecting previously unselected package libpcre2-posix3:ppc64el.
506s Preparing to unpack .../069-libpcre2-posix3_10.42-4ubuntu1_ppc64el.deb ...
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506s Selecting previously unselected package libpcre2-dev:ppc64el.
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506s Unpacking libpcre2-dev:ppc64el (10.42-4ubuntu1) ...
506s Selecting previously unselected package libpkgconf3:ppc64el.
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506s Unpacking libpkgconf3:ppc64el (1.8.1-2) ...
506s Selecting previously unselected package zlib1g-dev:ppc64el.
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506s Unpacking zlib1g-dev:ppc64el (1:1.3.dfsg-3.1ubuntu2) ...
506s Selecting previously unselected package libpng-dev:ppc64el.
506s Preparing to unpack .../073-libpng-dev_1.6.43-5build1_ppc64el.deb ...
506s Unpacking libpng-dev:ppc64el (1.6.43-5build1) ...
506s Selecting previously unselected package libreadline-dev:ppc64el.
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506s Unpacking libreadline-dev:ppc64el (8.2-4build1) ...
506s Selecting previously unselected package libsm6:ppc64el.
506s Preparing to unpack .../075-libsm6_2%3a1.2.3-1build2_ppc64el.deb ...
506s Unpacking libsm6:ppc64el (2:1.2.3-1build2) ...
506s Selecting previously unselected package libtcl8.6:ppc64el.
506s Preparing to unpack .../076-libtcl8.6_8.6.14+dfsg-1build1_ppc64el.deb ...
506s Unpacking libtcl8.6:ppc64el (8.6.14+dfsg-1build1) ...
506s Selecting previously unselected package libxft2:ppc64el.
506s Preparing to unpack .../077-libxft2_2.3.6-1_ppc64el.deb ...
506s Unpacking libxft2:ppc64el (2.3.6-1) ...
506s Selecting previously unselected package libxss1:ppc64el.
506s Preparing to unpack .../078-libxss1_1%3a1.2.3-1build2_ppc64el.deb ...
506s Unpacking libxss1:ppc64el (1:1.2.3-1build2) ...
506s Selecting previously unselected package libtk8.6:ppc64el.
506s Preparing to unpack .../079-libtk8.6_8.6.14-1build1_ppc64el.deb ...
506s Unpacking libtk8.6:ppc64el (8.6.14-1build1) ...
507s Selecting previously unselected package libxt6t64:ppc64el.
507s Preparing to unpack .../080-libxt6t64_1%3a1.2.1-1.2build1_ppc64el.deb ...
507s Unpacking libxt6t64:ppc64el (1:1.2.1-1.2build1) ...
507s Selecting previously unselected package pkgconf-bin.
507s Preparing to unpack .../081-pkgconf-bin_1.8.1-2_ppc64el.deb ...
507s Unpacking pkgconf-bin (1.8.1-2) ...
507s Selecting previously unselected package pkgconf:ppc64el.
507s Preparing to unpack .../082-pkgconf_1.8.1-2_ppc64el.deb ...
507s Unpacking pkgconf:ppc64el (1.8.1-2) ...
507s Selecting previously unselected package pkg-config:ppc64el.
507s Preparing to unpack .../083-pkg-config_1.8.1-2_ppc64el.deb ...
507s Unpacking pkg-config:ppc64el (1.8.1-2) ...
507s Selecting previously unselected package zip.
507s Preparing to unpack .../084-zip_3.0-13_ppc64el.deb ...
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507s Selecting previously unselected package unzip.
507s Preparing to unpack .../085-unzip_6.0-28ubuntu3_ppc64el.deb ...
507s Unpacking unzip (6.0-28ubuntu3) ...
507s Selecting previously unselected package xdg-utils.
507s Preparing to unpack .../086-xdg-utils_1.1.3-4.1ubuntu3_all.deb ...
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507s Selecting previously unselected package r-base-core.
507s Preparing to unpack .../087-r-base-core_4.3.3-2build2_ppc64el.deb ...
507s Unpacking r-base-core (4.3.3-2build2) ...
507s Selecting previously unselected package liblzma-dev:ppc64el.
507s Preparing to unpack .../088-liblzma-dev_5.6.1+really5.4.5-1_ppc64el.deb ...
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507s Selecting previously unselected package r-base-dev.
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507s Unpacking r-base-dev (4.3.3-2build2) ...
507s Selecting previously unselected package pkg-r-autopkgtest.
507s Preparing to unpack .../090-pkg-r-autopkgtest_20231212ubuntu1_all.deb ...
507s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ...
507s Selecting previously unselected package r-bioc-biocgenerics.
507s Preparing to unpack .../091-r-bioc-biocgenerics_0.48.1-2_all.deb ...
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507s Selecting previously unselected package r-bioc-graph.
507s Preparing to unpack .../092-r-bioc-graph_1.80.0-1_ppc64el.deb ...
507s Unpacking r-bioc-graph (1.80.0-1) ...
507s Selecting previously unselected package r-cran-biocmanager.
507s Preparing to unpack .../093-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ...
507s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ...
507s Selecting previously unselected package r-cran-cli.
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507s Selecting previously unselected package r-cran-cpp11.
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507s Selecting previously unselected package r-cran-glue.
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507s Selecting previously unselected package r-cran-rlang.
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507s Selecting previously unselected package r-cran-magrittr.
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508s Setting up libgraphite2-3:ppc64el (1.3.14-2) ...
508s Setting up libpixman-1-0:ppc64el (0.42.2-1) ...
508s Setting up libpaper1:ppc64el (1.1.29) ...
508s 
508s Creating config file /etc/papersize with new version
508s Setting up fontconfig (2.15.0-1.1ubuntu2) ...
510s Regenerating fonts cache... done.
510s Setting up libjpeg-turbo8-dev:ppc64el (2.1.5-2ubuntu1) ...
510s Setting up libncurses-dev:ppc64el (6.4+20240113-1ubuntu1) ...
510s Setting up libxrender1:ppc64el (1:0.9.10-1.1) ...
510s Setting up libdatrie1:ppc64el (0.2.13-3) ...
510s Setting up libxcb-render0:ppc64el (1.15-1) ...
510s Setting up unzip (6.0-28ubuntu3) ...
510s Setting up x11-common (1:7.7+23ubuntu2) ...
510s Setting up libxcb-shm0:ppc64el (1.15-1) ...
510s Setting up libpaper-utils (1.1.29) ...
510s Setting up libreadline-dev:ppc64el (8.2-4build1) ...
511s Setting up libgomp1:ppc64el (14-20240330-1ubuntu2) ...
511s Setting up libcairo2:ppc64el (1.18.0-3) ...
511s Setting up libpcre2-16-0:ppc64el (10.42-4ubuntu1) ...
511s Setting up zip (3.0-13) ...
511s Setting up libpcre2-32-0:ppc64el (10.42-4ubuntu1) ...
511s Setting up libblas3:ppc64el (3.12.0-3) ...
511s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode
511s Setting up libpkgconf3:ppc64el (1.8.1-2) ...
511s Setting up libquadmath0:ppc64el (14-20240330-1ubuntu2) ...
511s Setting up libmpc3:ppc64el (1.3.1-1) ...
511s Setting up libatomic1:ppc64el (14-20240330-1ubuntu2) ...
511s Setting up libtcl8.6:ppc64el (8.6.14+dfsg-1build1) ...
511s Setting up icu-devtools (74.2-1ubuntu1) ...
511s Setting up pkgconf-bin (1.8.1-2) ...
511s Setting up libltdl7:ppc64el (2.4.7-7) ...
511s Setting up libgfortran5:ppc64el (14-20240330-1ubuntu2) ...
511s Setting up liblzma-dev:ppc64el (5.6.1+really5.4.5-1) ...
511s Setting up libubsan1:ppc64el (14-20240330-1ubuntu2) ...
511s Setting up zlib1g-dev:ppc64el (1:1.3.dfsg-3.1ubuntu2) ...
511s Setting up libpcre2-posix3:ppc64el (10.42-4ubuntu1) ...
511s Setting up libasan8:ppc64el (14-20240330-1ubuntu2) ...
511s Setting up libsuitesparseconfig7:ppc64el (1:7.6.1+dfsg-1build1) ...
511s Setting up libharfbuzz0b:ppc64el (8.3.0-2build2) ...
511s Setting up libthai-data (0.1.29-2) ...
511s Setting up libxss1:ppc64el (1:1.2.3-1build2) ...
511s Setting up libtsan2:ppc64el (14-20240330-1ubuntu2) ...
511s Setting up libjpeg8-dev:ppc64el (8c-2ubuntu11) ...
511s Setting up libisl23:ppc64el (0.26-3) ...
511s Setting up cpp-13-powerpc64le-linux-gnu (13.2.0-23ubuntu3) ...
511s Setting up libicu-dev:ppc64el (74.2-1ubuntu1) ...
511s Setting up xdg-utils (1.1.3-4.1ubuntu3) ...
511s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
511s Setting up libcc1-0:ppc64el (14-20240330-1ubuntu2) ...
511s Setting up liblsan0:ppc64el (14-20240330-1ubuntu2) ...
511s Setting up libblas-dev:ppc64el (3.12.0-3) ...
511s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so to provide /usr/lib/powerpc64le-linux-gnu/libblas.so (libblas.so-powerpc64le-linux-gnu) in auto mode
511s Setting up dctrl-tools (2.24-3build2) ...
511s Setting up libitm1:ppc64el (14-20240330-1ubuntu2) ...
511s Setting up cpp-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ...
511s Setting up libbz2-dev:ppc64el (1.0.8-5ubuntu1) ...
511s Setting up libice6:ppc64el (2:1.0.10-1build2) ...
511s Setting up liblapack3:ppc64el (3.12.0-3) ...
511s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode
511s Setting up libxft2:ppc64el (2.3.6-1) ...
511s Setting up libamd3:ppc64el (1:7.6.1+dfsg-1build1) ...
511s Setting up libpcre2-dev:ppc64el (10.42-4ubuntu1) ...
511s Setting up cpp-13 (13.2.0-23ubuntu3) ...
511s Setting up libcolamd3:ppc64el (1:7.6.1+dfsg-1build1) ...
511s Setting up libtk8.6:ppc64el (8.6.14-1build1) ...
511s Setting up libpng-dev:ppc64el (1.6.43-5build1) ...
511s Setting up libjpeg-dev:ppc64el (8c-2ubuntu11) ...
511s Setting up pkgconf:ppc64el (1.8.1-2) ...
511s Setting up libthai0:ppc64el (0.1.29-2) ...
511s Setting up libglpk40:ppc64el (5.0-1build1) ...
511s Setting up liblapack-dev:ppc64el (3.12.0-3) ...
511s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so (liblapack.so-powerpc64le-linux-gnu) in auto mode
511s Setting up pkg-config:ppc64el (1.8.1-2) ...
511s Setting up libgcc-13-dev:ppc64el (13.2.0-23ubuntu3) ...
511s Setting up cpp (4:13.2.0-7ubuntu1) ...
511s Setting up libgfortran-13-dev:ppc64el (13.2.0-23ubuntu3) ...
511s Setting up libsm6:ppc64el (2:1.2.3-1build2) ...
511s Setting up libstdc++-13-dev:ppc64el (13.2.0-23ubuntu3) ...
511s Setting up libpango-1.0-0:ppc64el (1.52.1+ds-1build1) ...
511s Setting up gcc-13-powerpc64le-linux-gnu (13.2.0-23ubuntu3) ...
511s Setting up libxt6t64:ppc64el (1:1.2.1-1.2build1) ...
511s Setting up gcc-13 (13.2.0-23ubuntu3) ...
511s Setting up libpangoft2-1.0-0:ppc64el (1.52.1+ds-1build1) ...
511s Setting up libpangocairo-1.0-0:ppc64el (1.52.1+ds-1build1) ...
511s Setting up gfortran-13-powerpc64le-linux-gnu (13.2.0-23ubuntu3) ...
511s Setting up g++-13-powerpc64le-linux-gnu (13.2.0-23ubuntu3) ...
511s Setting up gcc-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ...
511s Setting up gfortran-13 (13.2.0-23ubuntu3) ...
511s Setting up r-base-core (4.3.3-2build2) ...
511s 
511s Creating config file /etc/R/Renviron with new version
511s Setting up r-cran-lattice (0.22-5-1) ...
511s Setting up r-cran-magrittr (2.0.3-1) ...
511s Setting up g++-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ...
511s Setting up g++-13 (13.2.0-23ubuntu3) ...
511s Setting up r-bioc-biocgenerics (0.48.1-2) ...
511s Setting up r-cran-rlang (1.1.3-1) ...
511s Setting up r-cran-glue (1.7.0-1) ...
511s Setting up r-cran-cli (3.6.2-1) ...
511s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
511s Setting up r-cran-biocmanager (1.30.22+dfsg-2) ...
511s Setting up gcc (4:13.2.0-7ubuntu1) ...
511s Setting up r-cran-pkgconfig (2.0.3-2build1) ...
511s Setting up gfortran-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ...
511s Setting up r-cran-cpp11 (0.4.7-1) ...
511s Setting up r-cran-matrix (1.6-5-1) ...
511s Setting up g++ (4:13.2.0-7ubuntu1) ...
511s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
511s Setting up build-essential (12.10ubuntu1) ...
511s Setting up r-cran-vctrs (0.6.5-1) ...
511s Setting up r-bioc-graph (1.80.0-1) ...
511s Setting up r-cran-igraph (2.0.3-1) ...
511s Setting up gfortran (4:13.2.0-7ubuntu1) ...
511s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
511s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
511s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
511s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
511s Setting up r-cran-ggm (2.5.1-1) ...
511s Setting up r-base-dev (4.3.3-2build2) ...
511s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
511s Setting up autopkgtest-satdep (0) ...
511s Processing triggers for man-db (2.12.0-4build1) ...
512s Processing triggers for install-info (7.1-3build2) ...
512s Processing triggers for libc-bin (2.39-0ubuntu8) ...
517s (Reading database ... 108793 files and directories currently installed.)
517s Removing autopkgtest-satdep (0) ...
518s autopkgtest [16:01:27]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
518s autopkgtest [16:01:27]: test pkg-r-autopkgtest: [-----------------------
518s Test: Try to load the R library ggm
518s 
518s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
518s Copyright (C) 2024 The R Foundation for Statistical Computing
518s Platform: powerpc64le-unknown-linux-gnu (64-bit)
518s 
518s R is free software and comes with ABSOLUTELY NO WARRANTY.
518s You are welcome to redistribute it under certain conditions.
518s Type 'license()' or 'licence()' for distribution details.
518s 
518s R is a collaborative project with many contributors.
518s Type 'contributors()' for more information and
518s 'citation()' on how to cite R or R packages in publications.
518s 
518s Type 'demo()' for some demos, 'help()' for on-line help, or
518s 'help.start()' for an HTML browser interface to help.
518s Type 'q()' to quit R.
518s 
519s > library('ggm')
519s > 
519s > 
519s Other tests are currently unsupported!
519s They will be progressively added.
520s autopkgtest [16:01:29]: test pkg-r-autopkgtest: -----------------------]
520s pkg-r-autopkgtest    PASS
520s autopkgtest [16:01:29]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
520s autopkgtest [16:01:29]: @@@@@@@@@@@@@@@@@@@@ summary
520s pkg-r-autopkgtest    PASS
532s Creating nova instance adt-noble-ppc64el-r-cran-ggm-20240408-155249-juju-7f2275-prod-proposed-migration-environment-3-2a539a9c-890d-4699-b9ac-37da3b6967d6 from image adt/ubuntu-noble-ppc64el-server-20240408.img (UUID 798e375b-4b38-4d20-a5ce-c112b292d6b8)...