198s autopkgtest [09:08:55]: starting date and time: 2024-07-08 09:08:55+0000 198s autopkgtest [09:08:55]: git checkout: fd3bed09 nova: allow more retries for quota issues 198s autopkgtest [09:08:55]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.2vu3_hiq/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:pandas --apt-upgrade q2-quality-filter --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=pandas/2.2.2+dfsg-4 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-ppc64el-8.secgroup --name adt-oracular-ppc64el-q2-quality-filter-20240708-090415-juju-7f2275-prod-proposed-migration-environment-2-d0e05b71-67e9-487f-a2bd-a5d2875dcbab --image adt/ubuntu-oracular-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 433s autopkgtest [09:12:50]: testbed dpkg architecture: ppc64el 434s autopkgtest [09:12:51]: testbed apt version: 2.9.6 434s autopkgtest [09:12:51]: @@@@@@@@@@@@@@@@@@@@ test bed setup 436s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [126 kB] 436s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [8548 B] 436s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [353 kB] 437s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [43.2 kB] 437s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [2576 B] 437s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el Packages [78.6 kB] 437s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el c-n-f Metadata [2596 B] 437s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/restricted ppc64el Packages [1368 B] 437s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/restricted ppc64el c-n-f Metadata [120 B] 437s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/universe ppc64el Packages [335 kB] 437s Get:11 http://ftpmaster.internal/ubuntu oracular-proposed/universe ppc64el c-n-f Metadata [9296 B] 437s Get:12 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse ppc64el Packages [1448 B] 437s Get:13 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse ppc64el c-n-f Metadata [120 B] 438s Fetched 962 kB in 1s (899 kB/s) 438s Reading package lists... 450s Reading package lists... 451s Building dependency tree... 451s Reading state information... 451s Calculating upgrade... 451s The following packages will be upgraded: 451s fuse3 libfuse3-3 451s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 451s Need to get 128 kB of archives. 451s After this operation, 61.4 kB disk space will be freed. 451s Get:1 http://ftpmaster.internal/ubuntu oracular/main ppc64el fuse3 ppc64el 3.14.0-6 [28.0 kB] 451s Get:2 http://ftpmaster.internal/ubuntu oracular/main ppc64el libfuse3-3 ppc64el 3.14.0-6 [99.5 kB] 451s Fetched 128 kB in 0s (354 kB/s) 452s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72734 files and directories currently installed.) 452s Preparing to unpack .../fuse3_3.14.0-6_ppc64el.deb ... 452s Adding 'diversion of /bin/fusermount to /bin/fusermount.usr-is-merged by fuse3' 452s Adding 'diversion of /sbin/mount.fuse to /sbin/mount.fuse.usr-is-merged by fuse3' 452s Unpacking fuse3 (3.14.0-6) over (3.14.0-5build1) ... 452s Preparing to unpack .../libfuse3-3_3.14.0-6_ppc64el.deb ... 452s Unpacking libfuse3-3:ppc64el (3.14.0-6) over (3.14.0-5build1) ... 452s Setting up libfuse3-3:ppc64el (3.14.0-6) ... 452s Setting up fuse3 (3.14.0-6) ... 452s Removing 'diversion of /bin/fusermount to /bin/fusermount.usr-is-merged by fuse3' 452s Removing 'diversion of /sbin/mount.fuse to /sbin/mount.fuse.usr-is-merged by fuse3' 452s update-initramfs: deferring update (trigger activated) 452s Processing triggers for libc-bin (2.39-0ubuntu9) ... 452s Processing triggers for man-db (2.12.1-2) ... 453s Processing triggers for initramfs-tools (0.142ubuntu29) ... 453s update-initramfs: Generating /boot/initrd.img-6.8.0-31-generic 453s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 459s Reading package lists... 459s Building dependency tree... 459s Reading state information... 460s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 460s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 460s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease 460s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 460s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 461s Reading package lists... 461s Reading package lists... 461s Building dependency tree... 461s Reading state information... 462s Calculating upgrade... 462s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 462s Reading package lists... 462s Building dependency tree... 462s Reading state information... 462s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 463s autopkgtest [09:13:20]: rebooting testbed after setup commands that affected boot 500s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 513s autopkgtest [09:14:10]: testbed running kernel: Linux 6.8.0-31-generic #31-Ubuntu SMP Sat Apr 20 00:05:55 UTC 2024 516s autopkgtest [09:14:13]: @@@@@@@@@@@@@@@@@@@@ apt-source q2-quality-filter 519s Get:1 http://ftpmaster.internal/ubuntu oracular/universe q2-quality-filter 2024.2.0-1ubuntu1 (dsc) [2421 B] 519s Get:2 http://ftpmaster.internal/ubuntu oracular/universe q2-quality-filter 2024.2.0-1ubuntu1 (tar) [257 kB] 519s Get:3 http://ftpmaster.internal/ubuntu oracular/universe q2-quality-filter 2024.2.0-1ubuntu1 (diff) [7140 B] 519s gpgv: Signature made Mon Jun 3 19:34:06 2024 UTC 519s gpgv: using RSA key 439884E6862A429C290DF63B033C4CA276024834 519s gpgv: issuer "athos.ribeiro@canonical.com" 519s gpgv: Can't check signature: No public key 519s dpkg-source: warning: cannot verify inline signature for ./q2-quality-filter_2024.2.0-1ubuntu1.dsc: no acceptable signature found 519s autopkgtest [09:14:16]: testing package q2-quality-filter version 2024.2.0-1ubuntu1 519s autopkgtest [09:14:16]: build not needed 520s autopkgtest [09:14:17]: test run-unit-test: preparing testbed 523s Reading package lists... 523s Building dependency tree... 523s Reading state information... 524s Starting pkgProblemResolver with broken count: 0 524s Starting 2 pkgProblemResolver with broken count: 0 524s Done 524s The following additional packages will be installed: 524s fonts-glyphicons-halflings javascript-common libaec0 libblas3 libgfortran5 524s libgomp1 libhdf5-103-1t64 libhdf5-hl-100t64 libjs-bootstrap libjs-jquery 524s libjs-jquery-hotkeys libjs-jquery-isonscreen libjs-jquery-metadata 524s libjs-jquery-tablesorter libjs-jquery-throttle-debounce libjs-popper.js 524s liblapack3 liblbfgsb0 liblzf1 libnorm1t64 libopenblas0 libopenblas0-pthread 524s libpgm-5.3-0t64 libsodium23 libssw0 libsz2 libxslt1.1 libyajl2 libzmq5 524s node-fortawesome-fontawesome-free node-normalize.css python3-all 524s python3-appdirs python3-bcrypt python3-bibtexparser python3-biom-format 524s python3-click python3-colorama python3-coverage python3-dateutil 524s python3-decorator python3-dill python3-filelock python3-flask 524s python3-flask-sqlalchemy python3-flufl.lock python3-globus-sdk 524s python3-greenlet python3-h5py python3-h5py-serial python3-hdmedians 524s python3-ijson python3-iniconfig python3-itsdangerous python3-lxml 524s python3-nacl python3-natsort python3-networkx python3-numpy 524s python3-packaging python3-pandas python3-pandas-lib python3-paramiko 524s python3-parsl python3-pluggy python3-psutil python3-public python3-py 524s python3-pytest python3-pytest-cov python3-scipy python3-setproctitle 524s python3-skbio python3-sqlalchemy python3-tblib python3-tomlkit 524s python3-typeguard python3-tz python3-tzlocal python3-werkzeug python3-zmq 524s q2-quality-filter q2-types q2templates qiime 524s Suggested packages: 524s apache2 | lighttpd | httpd libjs-html5shiv python-biom-format-doc 524s python-coverage-doc python3-objgraph python3-dotenv python-flask-doc 524s python-flufl.lock-doc python-greenlet-dev python-greenlet-doc 524s python-h5py-doc python-lxml-doc python-nacl-doc python-natsort-doc 524s python3-gdal python3-matplotlib python3-pydot python3-pygraphviz gcc 524s gfortran python-numpy-doc python3-dev python-pandas-doc python3-statsmodels 524s python3-gssapi python3-invoke python-public-doc subversion python-scipy-doc 524s python-skbio-doc python-sqlalchemy-doc python3-fdb python3-pymssql 524s python3-mysqldb python3-psycopg2 python3-asyncpg python3-aiosqlite ipython3 524s python-werkzeug-doc python3-watchdog 524s Recommended packages: 524s node-jquery python3-asgiref python3-simplejson python3-bs4 python3-cssselect 524s python3-html5lib python3-matplotlib python3-bottleneck python3-numexpr 524s python3-odf python3-openpyxl python3-tables r-cran-plotly g++ | c++-compiler 524s python3-pil python3-sqlalchemy-ext python3-pyinotify q2cli q2-cutadapt 524s q2-metadata q2-demux q2-feature-classifier q2-feature-table 524s The following NEW packages will be installed: 524s autopkgtest-satdep fonts-glyphicons-halflings javascript-common libaec0 524s libblas3 libgfortran5 libgomp1 libhdf5-103-1t64 libhdf5-hl-100t64 524s libjs-bootstrap libjs-jquery libjs-jquery-hotkeys libjs-jquery-isonscreen 524s libjs-jquery-metadata libjs-jquery-tablesorter 524s libjs-jquery-throttle-debounce libjs-popper.js liblapack3 liblbfgsb0 liblzf1 524s libnorm1t64 libopenblas0 libopenblas0-pthread libpgm-5.3-0t64 libsodium23 524s libssw0 libsz2 libxslt1.1 libyajl2 libzmq5 node-fortawesome-fontawesome-free 524s node-normalize.css python3-all python3-appdirs python3-bcrypt 524s python3-bibtexparser python3-biom-format python3-click python3-colorama 524s python3-coverage python3-dateutil python3-decorator python3-dill 524s python3-filelock python3-flask python3-flask-sqlalchemy python3-flufl.lock 524s python3-globus-sdk python3-greenlet python3-h5py python3-h5py-serial 524s python3-hdmedians python3-ijson python3-iniconfig python3-itsdangerous 524s python3-lxml python3-nacl python3-natsort python3-networkx python3-numpy 524s python3-packaging python3-pandas python3-pandas-lib python3-paramiko 524s python3-parsl python3-pluggy python3-psutil python3-public python3-py 524s python3-pytest python3-pytest-cov python3-scipy python3-setproctitle 524s python3-skbio python3-sqlalchemy python3-tblib python3-tomlkit 524s python3-typeguard python3-tz python3-tzlocal python3-werkzeug python3-zmq 524s q2-quality-filter q2-types q2templates qiime 524s 0 upgraded, 86 newly installed, 0 to remove and 0 not upgraded. 524s Need to get 72.4 MB/72.4 MB of archives. 524s After this operation, 396 MB of additional disk space will be used. 524s Get:1 /tmp/autopkgtest.5OdjKr/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [736 B] 524s Get:2 http://ftpmaster.internal/ubuntu oracular/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 524s Get:3 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libjs-jquery-hotkeys all 0~20130707+git2d51e3a9+dfsg-2.1 [11.5 kB] 524s Get:4 http://ftpmaster.internal/ubuntu oracular/universe ppc64el fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 524s Get:5 http://ftpmaster.internal/ubuntu oracular/main ppc64el javascript-common all 11+nmu1 [5936 B] 524s Get:6 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libaec0 ppc64el 1.1.3-1 [30.1 kB] 524s Get:7 http://ftpmaster.internal/ubuntu oracular/main ppc64el libblas3 ppc64el 3.12.0-3build1 [227 kB] 525s Get:8 http://ftpmaster.internal/ubuntu oracular/main ppc64el libgfortran5 ppc64el 14.1.0-1ubuntu1 [573 kB] 525s Get:9 http://ftpmaster.internal/ubuntu oracular/main ppc64el libgomp1 ppc64el 14.1.0-1ubuntu1 [161 kB] 525s Get:10 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libsz2 ppc64el 1.1.3-1 [5566 B] 525s Get:11 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libhdf5-103-1t64 ppc64el 1.10.10+repack-3.1ubuntu4 [1395 kB] 525s Get:12 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libhdf5-hl-100t64 ppc64el 1.10.10+repack-3.1ubuntu4 [70.9 kB] 525s Get:13 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 525s Get:14 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libjs-jquery-metadata all 12-4 [6582 B] 525s Get:15 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libjs-jquery-tablesorter all 1:2.31.3+dfsg1-3 [193 kB] 525s Get:16 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libjs-jquery-throttle-debounce all 1.1+dfsg.1-2 [12.5 kB] 525s Get:17 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 525s Get:18 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libopenblas0-pthread ppc64el 0.3.27+ds-2 [7850 kB] 526s Get:19 http://ftpmaster.internal/ubuntu oracular/main ppc64el liblapack3 ppc64el 3.12.0-3build1 [2804 kB] 526s Get:20 http://ftpmaster.internal/ubuntu oracular/universe ppc64el liblbfgsb0 ppc64el 3.0+dfsg.4-1build1 [33.0 kB] 526s Get:21 http://ftpmaster.internal/ubuntu oracular/universe ppc64el liblzf1 ppc64el 3.6-4 [7920 B] 526s Get:22 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libnorm1t64 ppc64el 1.5.9+dfsg-3.1build1 [194 kB] 526s Get:23 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libopenblas0 ppc64el 0.3.27+ds-2 [6220 B] 526s Get:24 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libpgm-5.3-0t64 ppc64el 5.3.128~dfsg-2.1build1 [185 kB] 526s Get:25 http://ftpmaster.internal/ubuntu oracular/main ppc64el libsodium23 ppc64el 1.0.18-1build3 [150 kB] 526s Get:26 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libssw0 ppc64el 1.1-14build1 [24.5 kB] 526s Get:27 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxslt1.1 ppc64el 1.1.39-0exp1build1 [192 kB] 526s Get:28 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libzmq5 ppc64el 4.3.5-1build2 [297 kB] 526s Get:29 http://ftpmaster.internal/ubuntu oracular/universe ppc64el node-fortawesome-fontawesome-free all 6.4.2+ds1-1 [1573 kB] 526s Get:30 http://ftpmaster.internal/ubuntu oracular/universe ppc64el node-normalize.css all 8.0.1-5 [10.8 kB] 526s Get:31 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-all ppc64el 3.12.3-0ubuntu1 [888 B] 526s Get:32 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-appdirs all 1.4.4-4 [10.9 kB] 526s Get:33 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-bibtexparser all 2.0.0b5+really1.4.1-1 [34.5 kB] 526s Get:34 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-numpy ppc64el 1:1.26.4+ds-10 [4408 kB] 527s Get:35 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-h5py-serial ppc64el 3.10.0-1ubuntu3 [955 kB] 527s Get:36 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-h5py all 3.10.0-1ubuntu3 [7978 B] 527s Get:37 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-colorama all 0.4.6-4 [32.1 kB] 527s Get:38 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-click all 8.1.7-1 [79.1 kB] 527s Get:39 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-dateutil all 2.9.0-2 [80.3 kB] 527s Get:40 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-tz all 2024.1-2 [31.4 kB] 527s Get:41 http://ftpmaster.internal/ubuntu oracular-proposed/universe ppc64el python3-pandas-lib ppc64el 2.2.2+dfsg-4 [4602 kB] 527s Get:42 http://ftpmaster.internal/ubuntu oracular-proposed/universe ppc64el python3-pandas all 2.2.2+dfsg-4 [3111 kB] 527s Get:43 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-decorator all 5.1.1-5 [10.1 kB] 527s Get:44 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-scipy ppc64el 1.12.0-2 [18.0 MB] 528s Get:45 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-biom-format ppc64el 2.1.16-1 [152 kB] 528s Get:46 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-coverage ppc64el 7.4.4+dfsg1-0ubuntu2 [149 kB] 528s Get:47 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-dill all 0.3.8-1 [83.0 kB] 528s Get:48 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-filelock all 3.15.4-1 [12.8 kB] 528s Get:49 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-itsdangerous all 2.2.0-1 [15.2 kB] 528s Get:50 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-werkzeug all 3.0.3-1 [170 kB] 528s Get:51 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-flask all 3.0.3-1ubuntu1 [83.2 kB] 528s Get:52 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-greenlet ppc64el 3.0.3-0ubuntu5 [163 kB] 528s Get:53 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-sqlalchemy all 1.4.50+ds1-1build1 [1020 kB] 528s Get:54 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-flask-sqlalchemy all 3.0.3-1 [30.9 kB] 528s Get:55 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-psutil ppc64el 5.9.8-2build2 [197 kB] 528s Get:56 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-public all 4.1.0-1 [7052 B] 528s Get:57 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-flufl.lock all 8.1.0-1 [12.4 kB] 528s Get:58 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-globus-sdk all 3.41.0-1 [225 kB] 528s Get:59 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-hdmedians ppc64el 0.14.2-5.1build1 [147 kB] 528s Get:60 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-iniconfig all 1.1.1-2 [6024 B] 528s Get:61 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-lxml ppc64el 5.2.1-1 [1250 kB] 528s Get:62 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-nacl ppc64el 1.5.0-4build1 [58.8 kB] 528s Get:63 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-natsort all 8.0.2-2 [33.8 kB] 528s Get:64 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-networkx all 3.2.1-4ubuntu1 [11.5 MB] 528s Get:65 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-packaging all 24.0-1 [41.1 kB] 528s Get:66 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-bcrypt ppc64el 4.1.2-1 [244 kB] 528s Get:67 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-paramiko all 3.4.0-1ubuntu1 [145 kB] 528s Get:68 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-setproctitle ppc64el 1.3.3-1build2 [19.6 kB] 528s Get:69 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-tblib all 3.0.0-5 [12.9 kB] 528s Get:70 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-typeguard all 4.1.5-1 [32.7 kB] 528s Get:71 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-py all 1.11.0-2 [72.7 kB] 528s Get:72 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-zmq ppc64el 24.0.1-5build1 [316 kB] 528s Get:73 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-parsl all 2024.05.27+ds-1 [274 kB] 528s Get:74 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-pluggy all 1.5.0-1 [21.0 kB] 528s Get:75 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-pytest all 7.4.4-1 [305 kB] 528s Get:76 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libjs-jquery-isonscreen all 1.2.0-1.1 [3244 B] 528s Get:77 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-pytest-cov all 5.0.0-1 [21.3 kB] 528s Get:78 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-skbio ppc64el 0.6.1-2 [1366 kB] 528s Get:79 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-tomlkit all 0.12.5-1 [37.7 kB] 528s Get:80 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-tzlocal all 5.2-1.1 [20.5 kB] 528s Get:81 http://ftpmaster.internal/ubuntu oracular/universe ppc64el qiime all 2024.2.0-1ubuntu1 [311 kB] 528s Get:82 http://ftpmaster.internal/ubuntu oracular/universe ppc64el q2templates all 2024.5.0+ds-1 [12.0 kB] 528s Get:83 http://ftpmaster.internal/ubuntu oracular/main ppc64el libyajl2 ppc64el 2.1.0-5build1 [23.5 kB] 528s Get:84 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-ijson ppc64el 3.3.0-1 [38.3 kB] 528s Get:85 http://ftpmaster.internal/ubuntu oracular/universe ppc64el q2-types all 2024.2.0-1ubuntu1 [5752 kB] 529s Get:86 http://ftpmaster.internal/ubuntu oracular/universe ppc64el q2-quality-filter all 2024.2.0-1ubuntu1 [23.2 kB] 529s Fetched 72.4 MB in 5s (15.6 MB/s) 529s Selecting previously unselected package libjs-jquery. 529s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72736 files and directories currently installed.) 529s Preparing to unpack .../00-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 529s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 529s Selecting previously unselected package libjs-jquery-hotkeys. 529s Preparing to unpack .../01-libjs-jquery-hotkeys_0~20130707+git2d51e3a9+dfsg-2.1_all.deb ... 529s Unpacking libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2.1) ... 529s Selecting previously unselected package fonts-glyphicons-halflings. 529s Preparing to unpack .../02-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 529s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 529s Selecting previously unselected package javascript-common. 529s Preparing to unpack .../03-javascript-common_11+nmu1_all.deb ... 529s Unpacking javascript-common (11+nmu1) ... 529s Selecting previously unselected package libaec0:ppc64el. 529s Preparing to unpack .../04-libaec0_1.1.3-1_ppc64el.deb ... 529s Unpacking libaec0:ppc64el (1.1.3-1) ... 529s Selecting previously unselected package libblas3:ppc64el. 529s Preparing to unpack .../05-libblas3_3.12.0-3build1_ppc64el.deb ... 529s Unpacking libblas3:ppc64el (3.12.0-3build1) ... 529s Selecting previously unselected package libgfortran5:ppc64el. 529s Preparing to unpack .../06-libgfortran5_14.1.0-1ubuntu1_ppc64el.deb ... 529s Unpacking libgfortran5:ppc64el (14.1.0-1ubuntu1) ... 529s Selecting previously unselected package libgomp1:ppc64el. 529s Preparing to unpack .../07-libgomp1_14.1.0-1ubuntu1_ppc64el.deb ... 529s Unpacking libgomp1:ppc64el (14.1.0-1ubuntu1) ... 529s Selecting previously unselected package libsz2:ppc64el. 529s Preparing to unpack .../08-libsz2_1.1.3-1_ppc64el.deb ... 529s Unpacking libsz2:ppc64el (1.1.3-1) ... 529s Selecting previously unselected package libhdf5-103-1t64:ppc64el. 529s Preparing to unpack .../09-libhdf5-103-1t64_1.10.10+repack-3.1ubuntu4_ppc64el.deb ... 529s Unpacking libhdf5-103-1t64:ppc64el (1.10.10+repack-3.1ubuntu4) ... 529s Selecting previously unselected package libhdf5-hl-100t64:ppc64el. 529s Preparing to unpack .../10-libhdf5-hl-100t64_1.10.10+repack-3.1ubuntu4_ppc64el.deb ... 529s Unpacking libhdf5-hl-100t64:ppc64el (1.10.10+repack-3.1ubuntu4) ... 529s Selecting previously unselected package libjs-bootstrap. 529s Preparing to unpack .../11-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 529s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 529s Selecting previously unselected package libjs-jquery-metadata. 529s Preparing to unpack .../12-libjs-jquery-metadata_12-4_all.deb ... 529s Unpacking libjs-jquery-metadata (12-4) ... 529s Selecting previously unselected package libjs-jquery-tablesorter. 529s Preparing to unpack .../13-libjs-jquery-tablesorter_1%3a2.31.3+dfsg1-3_all.deb ... 529s Unpacking libjs-jquery-tablesorter (1:2.31.3+dfsg1-3) ... 529s Selecting previously unselected package libjs-jquery-throttle-debounce. 529s Preparing to unpack .../14-libjs-jquery-throttle-debounce_1.1+dfsg.1-2_all.deb ... 529s Unpacking libjs-jquery-throttle-debounce (1.1+dfsg.1-2) ... 529s Selecting previously unselected package libjs-popper.js. 529s Preparing to unpack .../15-libjs-popper.js_1.16.1+ds-6_all.deb ... 529s Unpacking libjs-popper.js (1.16.1+ds-6) ... 529s Selecting previously unselected package libopenblas0-pthread:ppc64el. 529s Preparing to unpack .../16-libopenblas0-pthread_0.3.27+ds-2_ppc64el.deb ... 529s Unpacking libopenblas0-pthread:ppc64el (0.3.27+ds-2) ... 530s Selecting previously unselected package liblapack3:ppc64el. 530s Preparing to unpack .../17-liblapack3_3.12.0-3build1_ppc64el.deb ... 530s Unpacking liblapack3:ppc64el (3.12.0-3build1) ... 530s Selecting previously unselected package liblbfgsb0:ppc64el. 530s Preparing to unpack .../18-liblbfgsb0_3.0+dfsg.4-1build1_ppc64el.deb ... 530s Unpacking liblbfgsb0:ppc64el (3.0+dfsg.4-1build1) ... 530s Selecting previously unselected package liblzf1:ppc64el. 530s Preparing to unpack .../19-liblzf1_3.6-4_ppc64el.deb ... 530s Unpacking liblzf1:ppc64el (3.6-4) ... 530s Selecting previously unselected package libnorm1t64:ppc64el. 530s Preparing to unpack .../20-libnorm1t64_1.5.9+dfsg-3.1build1_ppc64el.deb ... 530s Unpacking libnorm1t64:ppc64el (1.5.9+dfsg-3.1build1) ... 530s Selecting previously unselected package libopenblas0:ppc64el. 530s Preparing to unpack .../21-libopenblas0_0.3.27+ds-2_ppc64el.deb ... 530s Unpacking libopenblas0:ppc64el (0.3.27+ds-2) ... 530s Selecting previously unselected package libpgm-5.3-0t64:ppc64el. 530s Preparing to unpack .../22-libpgm-5.3-0t64_5.3.128~dfsg-2.1build1_ppc64el.deb ... 530s Unpacking libpgm-5.3-0t64:ppc64el (5.3.128~dfsg-2.1build1) ... 530s Selecting previously unselected package libsodium23:ppc64el. 530s Preparing to unpack .../23-libsodium23_1.0.18-1build3_ppc64el.deb ... 530s Unpacking libsodium23:ppc64el (1.0.18-1build3) ... 530s Selecting previously unselected package libssw0:ppc64el. 530s Preparing to unpack .../24-libssw0_1.1-14build1_ppc64el.deb ... 530s Unpacking libssw0:ppc64el (1.1-14build1) ... 530s Selecting previously unselected package libxslt1.1:ppc64el. 530s Preparing to unpack .../25-libxslt1.1_1.1.39-0exp1build1_ppc64el.deb ... 530s Unpacking libxslt1.1:ppc64el (1.1.39-0exp1build1) ... 530s Selecting previously unselected package libzmq5:ppc64el. 530s Preparing to unpack .../26-libzmq5_4.3.5-1build2_ppc64el.deb ... 530s Unpacking libzmq5:ppc64el (4.3.5-1build2) ... 530s Selecting previously unselected package node-fortawesome-fontawesome-free. 530s Preparing to unpack .../27-node-fortawesome-fontawesome-free_6.4.2+ds1-1_all.deb ... 530s Unpacking node-fortawesome-fontawesome-free (6.4.2+ds1-1) ... 530s Selecting previously unselected package node-normalize.css. 530s Preparing to unpack .../28-node-normalize.css_8.0.1-5_all.deb ... 530s Unpacking node-normalize.css (8.0.1-5) ... 530s Selecting previously unselected package python3-all. 530s Preparing to unpack .../29-python3-all_3.12.3-0ubuntu1_ppc64el.deb ... 530s Unpacking python3-all (3.12.3-0ubuntu1) ... 530s Selecting previously unselected package python3-appdirs. 530s Preparing to unpack .../30-python3-appdirs_1.4.4-4_all.deb ... 530s Unpacking python3-appdirs (1.4.4-4) ... 530s Selecting previously unselected package python3-bibtexparser. 530s Preparing to unpack .../31-python3-bibtexparser_2.0.0b5+really1.4.1-1_all.deb ... 530s Unpacking python3-bibtexparser (2.0.0b5+really1.4.1-1) ... 530s Selecting previously unselected package python3-numpy. 530s Preparing to unpack .../32-python3-numpy_1%3a1.26.4+ds-10_ppc64el.deb ... 530s Unpacking python3-numpy (1:1.26.4+ds-10) ... 530s Selecting previously unselected package python3-h5py-serial. 530s Preparing to unpack .../33-python3-h5py-serial_3.10.0-1ubuntu3_ppc64el.deb ... 530s Unpacking python3-h5py-serial (3.10.0-1ubuntu3) ... 531s Selecting previously unselected package python3-h5py. 531s Preparing to unpack .../34-python3-h5py_3.10.0-1ubuntu3_all.deb ... 531s Unpacking python3-h5py (3.10.0-1ubuntu3) ... 531s Selecting previously unselected package python3-colorama. 531s Preparing to unpack .../35-python3-colorama_0.4.6-4_all.deb ... 531s Unpacking python3-colorama (0.4.6-4) ... 531s Selecting previously unselected package python3-click. 531s Preparing to unpack .../36-python3-click_8.1.7-1_all.deb ... 531s Unpacking python3-click (8.1.7-1) ... 531s Selecting previously unselected package python3-dateutil. 531s Preparing to unpack .../37-python3-dateutil_2.9.0-2_all.deb ... 531s Unpacking python3-dateutil (2.9.0-2) ... 531s Selecting previously unselected package python3-tz. 531s Preparing to unpack .../38-python3-tz_2024.1-2_all.deb ... 531s Unpacking python3-tz (2024.1-2) ... 531s Selecting previously unselected package python3-pandas-lib:ppc64el. 531s Preparing to unpack .../39-python3-pandas-lib_2.2.2+dfsg-4_ppc64el.deb ... 531s Unpacking python3-pandas-lib:ppc64el (2.2.2+dfsg-4) ... 531s Selecting previously unselected package python3-pandas. 531s Preparing to unpack .../40-python3-pandas_2.2.2+dfsg-4_all.deb ... 531s Unpacking python3-pandas (2.2.2+dfsg-4) ... 531s Selecting previously unselected package python3-decorator. 531s Preparing to unpack .../41-python3-decorator_5.1.1-5_all.deb ... 531s Unpacking python3-decorator (5.1.1-5) ... 531s Selecting previously unselected package python3-scipy. 531s Preparing to unpack .../42-python3-scipy_1.12.0-2_ppc64el.deb ... 531s Unpacking python3-scipy (1.12.0-2) ... 532s Selecting previously unselected package python3-biom-format. 532s Preparing to unpack .../43-python3-biom-format_2.1.16-1_ppc64el.deb ... 532s Unpacking python3-biom-format (2.1.16-1) ... 532s Selecting previously unselected package python3-coverage. 532s Preparing to unpack .../44-python3-coverage_7.4.4+dfsg1-0ubuntu2_ppc64el.deb ... 532s Unpacking python3-coverage (7.4.4+dfsg1-0ubuntu2) ... 532s Selecting previously unselected package python3-dill. 532s Preparing to unpack .../45-python3-dill_0.3.8-1_all.deb ... 532s Unpacking python3-dill (0.3.8-1) ... 532s Selecting previously unselected package python3-filelock. 532s Preparing to unpack .../46-python3-filelock_3.15.4-1_all.deb ... 532s Unpacking python3-filelock (3.15.4-1) ... 532s Selecting previously unselected package python3-itsdangerous. 532s Preparing to unpack .../47-python3-itsdangerous_2.2.0-1_all.deb ... 532s Unpacking python3-itsdangerous (2.2.0-1) ... 532s Selecting previously unselected package python3-werkzeug. 532s Preparing to unpack .../48-python3-werkzeug_3.0.3-1_all.deb ... 532s Unpacking python3-werkzeug (3.0.3-1) ... 532s Selecting previously unselected package python3-flask. 532s Preparing to unpack .../49-python3-flask_3.0.3-1ubuntu1_all.deb ... 532s Unpacking python3-flask (3.0.3-1ubuntu1) ... 532s Selecting previously unselected package python3-greenlet. 532s Preparing to unpack .../50-python3-greenlet_3.0.3-0ubuntu5_ppc64el.deb ... 532s Unpacking python3-greenlet (3.0.3-0ubuntu5) ... 532s Selecting previously unselected package python3-sqlalchemy. 532s Preparing to unpack .../51-python3-sqlalchemy_1.4.50+ds1-1build1_all.deb ... 532s Unpacking python3-sqlalchemy (1.4.50+ds1-1build1) ... 532s Selecting previously unselected package python3-flask-sqlalchemy. 532s Preparing to unpack .../52-python3-flask-sqlalchemy_3.0.3-1_all.deb ... 532s Unpacking python3-flask-sqlalchemy (3.0.3-1) ... 532s Selecting previously unselected package python3-psutil. 532s Preparing to unpack .../53-python3-psutil_5.9.8-2build2_ppc64el.deb ... 532s Unpacking python3-psutil (5.9.8-2build2) ... 532s Selecting previously unselected package python3-public. 532s Preparing to unpack .../54-python3-public_4.1.0-1_all.deb ... 532s Unpacking python3-public (4.1.0-1) ... 532s Selecting previously unselected package python3-flufl.lock. 532s Preparing to unpack .../55-python3-flufl.lock_8.1.0-1_all.deb ... 532s Unpacking python3-flufl.lock (8.1.0-1) ... 532s Selecting previously unselected package python3-globus-sdk. 532s Preparing to unpack .../56-python3-globus-sdk_3.41.0-1_all.deb ... 532s Unpacking python3-globus-sdk (3.41.0-1) ... 532s Selecting previously unselected package python3-hdmedians. 532s Preparing to unpack .../57-python3-hdmedians_0.14.2-5.1build1_ppc64el.deb ... 532s Unpacking python3-hdmedians (0.14.2-5.1build1) ... 532s Selecting previously unselected package python3-iniconfig. 532s Preparing to unpack .../58-python3-iniconfig_1.1.1-2_all.deb ... 532s Unpacking python3-iniconfig (1.1.1-2) ... 532s Selecting previously unselected package python3-lxml:ppc64el. 532s Preparing to unpack .../59-python3-lxml_5.2.1-1_ppc64el.deb ... 532s Unpacking python3-lxml:ppc64el (5.2.1-1) ... 532s Selecting previously unselected package python3-nacl. 532s Preparing to unpack .../60-python3-nacl_1.5.0-4build1_ppc64el.deb ... 532s Unpacking python3-nacl (1.5.0-4build1) ... 532s Selecting previously unselected package python3-natsort. 532s Preparing to unpack .../61-python3-natsort_8.0.2-2_all.deb ... 532s Unpacking python3-natsort (8.0.2-2) ... 532s Selecting previously unselected package python3-networkx. 532s Preparing to unpack .../62-python3-networkx_3.2.1-4ubuntu1_all.deb ... 532s Unpacking python3-networkx (3.2.1-4ubuntu1) ... 533s Selecting previously unselected package python3-packaging. 533s Preparing to unpack .../63-python3-packaging_24.0-1_all.deb ... 533s Unpacking python3-packaging (24.0-1) ... 533s Selecting previously unselected package python3-bcrypt. 533s Preparing to unpack .../64-python3-bcrypt_4.1.2-1_ppc64el.deb ... 533s Unpacking python3-bcrypt (4.1.2-1) ... 533s Selecting previously unselected package python3-paramiko. 533s Preparing to unpack .../65-python3-paramiko_3.4.0-1ubuntu1_all.deb ... 533s Unpacking python3-paramiko (3.4.0-1ubuntu1) ... 533s Selecting previously unselected package python3-setproctitle:ppc64el. 533s Preparing to unpack .../66-python3-setproctitle_1.3.3-1build2_ppc64el.deb ... 533s Unpacking python3-setproctitle:ppc64el (1.3.3-1build2) ... 533s Selecting previously unselected package python3-tblib. 533s Preparing to unpack .../67-python3-tblib_3.0.0-5_all.deb ... 533s Unpacking python3-tblib (3.0.0-5) ... 533s Selecting previously unselected package python3-typeguard. 533s Preparing to unpack .../68-python3-typeguard_4.1.5-1_all.deb ... 533s Unpacking python3-typeguard (4.1.5-1) ... 533s Selecting previously unselected package python3-py. 533s Preparing to unpack .../69-python3-py_1.11.0-2_all.deb ... 533s Unpacking python3-py (1.11.0-2) ... 533s Selecting previously unselected package python3-zmq. 533s Preparing to unpack .../70-python3-zmq_24.0.1-5build1_ppc64el.deb ... 533s Unpacking python3-zmq (24.0.1-5build1) ... 533s Selecting previously unselected package python3-parsl. 533s Preparing to unpack .../71-python3-parsl_2024.05.27+ds-1_all.deb ... 533s Unpacking python3-parsl (2024.05.27+ds-1) ... 534s Selecting previously unselected package python3-pluggy. 534s Preparing to unpack .../72-python3-pluggy_1.5.0-1_all.deb ... 534s Unpacking python3-pluggy (1.5.0-1) ... 534s Selecting previously unselected package python3-pytest. 534s Preparing to unpack .../73-python3-pytest_7.4.4-1_all.deb ... 534s Unpacking python3-pytest (7.4.4-1) ... 534s Selecting previously unselected package libjs-jquery-isonscreen. 534s Preparing to unpack .../74-libjs-jquery-isonscreen_1.2.0-1.1_all.deb ... 534s Unpacking libjs-jquery-isonscreen (1.2.0-1.1) ... 534s Selecting previously unselected package python3-pytest-cov. 534s Preparing to unpack .../75-python3-pytest-cov_5.0.0-1_all.deb ... 534s Unpacking python3-pytest-cov (5.0.0-1) ... 534s Selecting previously unselected package python3-skbio. 534s Preparing to unpack .../76-python3-skbio_0.6.1-2_ppc64el.deb ... 534s Unpacking python3-skbio (0.6.1-2) ... 534s Selecting previously unselected package python3-tomlkit. 534s Preparing to unpack .../77-python3-tomlkit_0.12.5-1_all.deb ... 534s Unpacking python3-tomlkit (0.12.5-1) ... 534s Selecting previously unselected package python3-tzlocal. 534s Preparing to unpack .../78-python3-tzlocal_5.2-1.1_all.deb ... 534s Unpacking python3-tzlocal (5.2-1.1) ... 534s Selecting previously unselected package qiime. 534s Preparing to unpack .../79-qiime_2024.2.0-1ubuntu1_all.deb ... 534s Unpacking qiime (2024.2.0-1ubuntu1) ... 534s Selecting previously unselected package q2templates. 534s Preparing to unpack .../80-q2templates_2024.5.0+ds-1_all.deb ... 534s Unpacking q2templates (2024.5.0+ds-1) ... 534s Selecting previously unselected package libyajl2:ppc64el. 534s Preparing to unpack .../81-libyajl2_2.1.0-5build1_ppc64el.deb ... 534s Unpacking libyajl2:ppc64el (2.1.0-5build1) ... 534s Selecting previously unselected package python3-ijson. 534s Preparing to unpack .../82-python3-ijson_3.3.0-1_ppc64el.deb ... 534s Unpacking python3-ijson (3.3.0-1) ... 534s Selecting previously unselected package q2-types. 534s Preparing to unpack .../83-q2-types_2024.2.0-1ubuntu1_all.deb ... 534s Unpacking q2-types (2024.2.0-1ubuntu1) ... 534s Selecting previously unselected package q2-quality-filter. 534s Preparing to unpack .../84-q2-quality-filter_2024.2.0-1ubuntu1_all.deb ... 534s Unpacking q2-quality-filter (2024.2.0-1ubuntu1) ... 534s Selecting previously unselected package autopkgtest-satdep. 534s Preparing to unpack .../85-1-autopkgtest-satdep.deb ... 534s Unpacking autopkgtest-satdep (0) ... 534s Setting up javascript-common (11+nmu1) ... 534s Setting up python3-iniconfig (1.1.1-2) ... 535s Setting up libnorm1t64:ppc64el (1.5.9+dfsg-3.1build1) ... 535s Setting up python3-filelock (3.15.4-1) ... 535s Setting up libsodium23:ppc64el (1.0.18-1build3) ... 535s Setting up python3-tblib (3.0.0-5) ... 535s Setting up python3-py (1.11.0-2) ... 535s Setting up libjs-popper.js (1.16.1+ds-6) ... 535s Setting up python3-colorama (0.4.6-4) ... 535s Setting up python3-public (4.1.0-1) ... 535s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 535s Setting up python3-bcrypt (4.1.2-1) ... 535s Setting up python3-typeguard (4.1.5-1) ... 536s Setting up libyajl2:ppc64el (2.1.0-5build1) ... 536s Setting up python3-itsdangerous (2.2.0-1) ... 536s Setting up python3-all (3.12.3-0ubuntu1) ... 536s Setting up python3-coverage (7.4.4+dfsg1-0ubuntu2) ... 536s Setting up node-fortawesome-fontawesome-free (6.4.2+ds1-1) ... 536s Setting up libjs-jquery-throttle-debounce (1.1+dfsg.1-2) ... 536s Setting up libgomp1:ppc64el (14.1.0-1ubuntu1) ... 536s Setting up python3-click (8.1.7-1) ... 536s Setting up python3-networkx (3.2.1-4ubuntu1) ... 538s Setting up libaec0:ppc64el (1.1.3-1) ... 538s Setting up python3-psutil (5.9.8-2build2) ... 538s Setting up python3-tz (2024.1-2) ... 538s Setting up python3-natsort (8.0.2-2) ... 538s Setting up python3-flufl.lock (8.1.0-1) ... 538s Setting up libpgm-5.3-0t64:ppc64el (5.3.128~dfsg-2.1build1) ... 538s Setting up python3-decorator (5.1.1-5) ... 539s Setting up libblas3:ppc64el (3.12.0-3build1) ... 539s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 539s Setting up python3-packaging (24.0-1) ... 539s Setting up python3-dill (0.3.8-1) ... 539s Setting up liblzf1:ppc64el (3.6-4) ... 539s Setting up python3-greenlet (3.0.3-0ubuntu5) ... 539s Setting up python3-setproctitle:ppc64el (1.3.3-1build2) ... 539s Setting up libgfortran5:ppc64el (14.1.0-1ubuntu1) ... 539s Setting up python3-pluggy (1.5.0-1) ... 539s Setting up libxslt1.1:ppc64el (1.1.39-0exp1build1) ... 539s Setting up python3-dateutil (2.9.0-2) ... 540s Setting up python3-bibtexparser (2.0.0b5+really1.4.1-1) ... 540s /usr/lib/python3/dist-packages/bibtexparser/latexenc.py:93: SyntaxWarning: invalid escape sequence '\g' 540s string = re.sub('([^{]|^)([A-Z])([^}]|$)', '\g<1>{\g<2>}\g<3>', string) 540s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 540s Setting up python3-tzlocal (5.2-1.1) ... 540s Setting up libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2.1) ... 540s Setting up python3-tomlkit (0.12.5-1) ... 540s Setting up node-normalize.css (8.0.1-5) ... 540s Setting up python3-appdirs (1.4.4-4) ... 540s Setting up libssw0:ppc64el (1.1-14build1) ... 540s Setting up python3-nacl (1.5.0-4build1) ... 540s Setting up python3-globus-sdk (3.41.0-1) ... 541s Setting up libsz2:ppc64el (1.1.3-1) ... 541s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 541s Setting up liblapack3:ppc64el (3.12.0-3build1) ... 541s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 541s Setting up libopenblas0-pthread:ppc64el (0.3.27+ds-2) ... 541s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/openblas-pthread/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 541s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 541s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/powerpc64le-linux-gnu/libopenblas.so.0 (libopenblas.so.0-powerpc64le-linux-gnu) in auto mode 541s Setting up libzmq5:ppc64el (4.3.5-1build2) ... 541s Setting up python3-ijson (3.3.0-1) ... 541s Setting up python3-pytest (7.4.4-1) ... 541s Setting up python3-sqlalchemy (1.4.50+ds1-1build1) ... 542s Setting up python3-werkzeug (3.0.3-1) ... 543s Setting up python3-zmq (24.0.1-5build1) ... 543s Setting up libjs-jquery-metadata (12-4) ... 543s Setting up libjs-jquery-isonscreen (1.2.0-1.1) ... 543s Setting up python3-numpy (1:1.26.4+ds-10) ... 545s Setting up libjs-jquery-tablesorter (1:2.31.3+dfsg1-3) ... 545s Setting up python3-hdmedians (0.14.2-5.1build1) ... 546s Setting up libopenblas0:ppc64el (0.3.27+ds-2) ... 546s Setting up python3-lxml:ppc64el (5.2.1-1) ... 546s Setting up python3-paramiko (3.4.0-1ubuntu1) ... 546s Setting up libhdf5-103-1t64:ppc64el (1.10.10+repack-3.1ubuntu4) ... 546s Setting up liblbfgsb0:ppc64el (3.0+dfsg.4-1build1) ... 546s Setting up libhdf5-hl-100t64:ppc64el (1.10.10+repack-3.1ubuntu4) ... 546s Setting up python3-scipy (1.12.0-2) ... 550s Setting up python3-flask (3.0.3-1ubuntu1) ... 550s Setting up python3-pandas-lib:ppc64el (2.2.2+dfsg-4) ... 550s Setting up python3-h5py-serial (3.10.0-1ubuntu3) ... 551s Setting up python3-pytest-cov (5.0.0-1) ... 551s Setting up python3-pandas (2.2.2+dfsg-4) ... 557s Setting up python3-h5py (3.10.0-1ubuntu3) ... 557s Setting up python3-flask-sqlalchemy (3.0.3-1) ... 557s Setting up q2templates (2024.5.0+ds-1) ... 558s Setting up python3-parsl (2024.05.27+ds-1) ... 558s Setting up qiime (2024.2.0-1ubuntu1) ... 559s Setting up python3-biom-format (2.1.16-1) ... 559s Setting up python3-skbio (0.6.1-2) ... 560s Setting up q2-types (2024.2.0-1ubuntu1) ... 560s Setting up q2-quality-filter (2024.2.0-1ubuntu1) ... 560s Setting up autopkgtest-satdep (0) ... 560s Processing triggers for man-db (2.12.1-2) ... 561s Processing triggers for libc-bin (2.39-0ubuntu9) ... 564s (Reading database ... 87271 files and directories currently installed.) 564s Removing autopkgtest-satdep (0) ... 565s autopkgtest [09:15:02]: test run-unit-test: [----------------------- 566s ============================= test session starts ============================== 566s platform linux -- Python 3.12.4, pytest-7.4.4, pluggy-1.5.0 -- /usr/bin/python3.12 566s cachedir: .pytest_cache 566s rootdir: /tmp/autopkgtest.5OdjKr/autopkgtest_tmp 566s plugins: cov-5.0.0, typeguard-4.1.5 575s collecting ... collected 11 items 575s 576s q2_quality_filter/test/test_filter.py::FilterTests::test_q_score FAILED [ 9%] 576s q2_quality_filter/test/test_filter.py::FilterTests::test_q_score_all_dropped FAILED [ 18%] 577s q2_quality_filter/test/test_filter.py::FilterTests::test_q_score_numeric_ids FAILED [ 27%] 577s q2_quality_filter/test/test_filter.py::FilterTests::test_q_score_real FAILED [ 36%] 578s q2_quality_filter/test/test_filter.py::FilterTests::test_q_score_real_joined FAILED [ 45%] 578s q2_quality_filter/test/test_filter.py::FilterTests::test_read_fastq_seqs PASSED [ 54%] 578s q2_quality_filter/test/test_filter.py::FilterTests::test_runs_of_ones PASSED [ 63%] 578s q2_quality_filter/test/test_filter.py::FilterTests::test_truncate PASSED [ 72%] 578s q2_quality_filter/test/test_filter.py::TransformerTests::test_numeric_ids PASSED [ 81%] 578s q2_quality_filter/test/test_filter.py::TransformerTests::test_stats_to_metadata PASSED [ 90%] 578s q2_quality_filter/test/test_filter.py::TestUsageExamples::test_examples SKIPPED [100%] 578s 578s =================================== FAILURES =================================== 578s ___________________________ FilterTests.test_q_score ___________________________ 578s 578s self = <[AttributeError("'ProvenancePath' object has no attribute '_raw_paths'") raised in repr()] ProvenancePath object at 0x7217bb4a4cd0> 578s 578s def __str__(self): 578s """Return the string representation of the path, suitable for 578s passing to system calls.""" 578s try: 578s > return self._str 578s E AttributeError: 'ProvenancePath' object has no attribute '_str' 578s 578s /usr/lib/python3.12/pathlib.py:441: AttributeError 578s 578s During handling of the above exception, another exception occurred: 578s 578s self = <[AttributeError("'ProvenancePath' object has no attribute '_raw_paths'") raised in repr()] ProvenancePath object at 0x7217bb4a4cd0> 578s 578s @property 578s def drive(self): 578s """The drive prefix (letter or UNC path), if any.""" 578s try: 578s > return self._drv 578s E AttributeError: 'ProvenancePath' object has no attribute '_drv' 578s 578s /usr/lib/python3.12/pathlib.py:555: AttributeError 578s 578s During handling of the above exception, another exception occurred: 578s 578s self = 578s 578s def test_q_score(self): 578s ar = Artifact.load(self.get_data_path('simple.qza')) 578s with redirected_stdio(stdout=os.devnull): 578s > obs_drop_ambig_ar, stats_ar = self.plugin.methods['q_score']( 578s ar, quality_window=2, min_quality=20, min_length_fraction=0.25) 578s 578s q2_quality_filter/test/test_filter.py:110: 578s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 578s /usr/lib/python3/dist-packages/decorator.py:232: in fun 578s return caller(func, *(extras + args), **kw) 578s /usr/lib/python3/dist-packages/qiime2/sdk/action.py:321: in bound_callable 578s provenance = self._ProvCaptureCls( 578s /usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py:546: in __init__ 578s super().__init__() 578s /usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py:296: in __init__ 578s self._build_paths() 578s /usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py:303: in _build_paths 578s self.path = qiime2.core.path.ProvenancePath() 578s /usr/lib/python3/dist-packages/qiime2/core/path.py:146: in __new__ 578s return cls.__new(path) 578s /usr/lib/python3/dist-packages/qiime2/core/path.py:129: in __new 578s self._destructor = weakref.finalize(self, self._destruct, str(self)) 578s /usr/lib/python3.12/pathlib.py:443: in __str__ 578s self._str = self._format_parsed_parts(self.drive, self.root, 578s /usr/lib/python3.12/pathlib.py:557: in drive 578s self._load_parts() 578s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 578s 578s self = <[AttributeError("'ProvenancePath' object has no attribute '_raw_paths'") raised in repr()] ProvenancePath object at 0x7217bb4a4cd0> 578s 578s def _load_parts(self): 578s > paths = self._raw_paths 578s E AttributeError: 'ProvenancePath' object has no attribute '_raw_paths' 578s 578s /usr/lib/python3.12/pathlib.py:408: AttributeError 578s _____________________ FilterTests.test_q_score_all_dropped _____________________ 578s 578s def __str__(self): 578s """Return the string representation of the path, suitable for 578s passing to system calls.""" 578s try: 578s > return self._str 578s E AttributeError: 'ProvenancePath' object has no attribute '_str' 578s 578s /usr/lib/python3.12/pathlib.py:441: AttributeError 578s 578s During handling of the above exception, another exception occurred: 578s 578s @property 578s def drive(self): 578s """The drive prefix (letter or UNC path), if any.""" 578s try: 578s > return self._drv 578s E AttributeError: 'ProvenancePath' object has no attribute '_drv' 578s 578s /usr/lib/python3.12/pathlib.py:555: AttributeError 578s 578s During handling of the above exception, another exception occurred: 578s 578s self = 578s 578s def test_q_score_all_dropped(self): 578s ar = Artifact.load(self.get_data_path('simple.qza')) 578s 578s with self.assertRaisesRegex(ValueError, "filtered out"): 578s with redirected_stdio(stdout=os.devnull): 578s > self.plugin.methods['q_score'](ar, min_quality=50) 578s 578s q2_quality_filter/test/test_filter.py:88: 578s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 578s /usr/lib/python3/dist-packages/decorator.py:232: in fun 578s return caller(func, *(extras + args), **kw) 578s /usr/lib/python3/dist-packages/qiime2/sdk/action.py:321: in bound_callable 578s provenance = self._ProvCaptureCls( 578s /usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py:546: in __init__ 578s super().__init__() 578s /usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py:296: in __init__ 578s self._build_paths() 578s /usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py:303: in _build_paths 578s self.path = qiime2.core.path.ProvenancePath() 578s /usr/lib/python3/dist-packages/qiime2/core/path.py:146: in __new__ 578s return cls.__new(path) 578s /usr/lib/python3/dist-packages/qiime2/core/path.py:129: in __new 578s self._destructor = weakref.finalize(self, self._destruct, str(self)) 578s /usr/lib/python3.12/pathlib.py:443: in __str__ 578s self._str = self._format_parsed_parts(self.drive, self.root, 578s /usr/lib/python3.12/pathlib.py:557: in drive 578s self._load_parts() 578s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 578s 578s def _load_parts(self): 578s > paths = self._raw_paths 578s E AttributeError: 'ProvenancePath' object has no attribute '_raw_paths' 578s 578s /usr/lib/python3.12/pathlib.py:408: AttributeError 578s _____________________ FilterTests.test_q_score_numeric_ids _____________________ 578s 578s self = <[AttributeError("'ProvenancePath' object has no attribute '_raw_paths'") raised in repr()] ProvenancePath object at 0x7217bb09c6d0> 578s 578s def __str__(self): 578s """Return the string representation of the path, suitable for 578s passing to system calls.""" 578s try: 578s > return self._str 578s E AttributeError: 'ProvenancePath' object has no attribute '_str' 578s 578s /usr/lib/python3.12/pathlib.py:441: AttributeError 578s 578s During handling of the above exception, another exception occurred: 578s 578s self = <[AttributeError("'ProvenancePath' object has no attribute '_raw_paths'") raised in repr()] ProvenancePath object at 0x7217bb09c6d0> 578s 578s @property 578s def drive(self): 578s """The drive prefix (letter or UNC path), if any.""" 578s try: 578s > return self._drv 578s E AttributeError: 'ProvenancePath' object has no attribute '_drv' 578s 578s /usr/lib/python3.12/pathlib.py:555: AttributeError 578s 578s During handling of the above exception, another exception occurred: 578s 578s self = 578s 578s def test_q_score_numeric_ids(self): 578s ar = Artifact.load(self.get_data_path('numeric_ids.qza')) 578s exp_sids = {'00123', '0.4560'} 578s 578s with redirected_stdio(stdout=os.devnull): 578s > obs_ar, stats_ar = self.plugin.methods['q_score']( 578s ar, min_quality=20) 578s 578s q2_quality_filter/test/test_filter.py:95: 578s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 578s /usr/lib/python3/dist-packages/decorator.py:232: in fun 578s return caller(func, *(extras + args), **kw) 578s /usr/lib/python3/dist-packages/qiime2/sdk/action.py:321: in bound_callable 578s provenance = self._ProvCaptureCls( 578s /usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py:546: in __init__ 578s super().__init__() 578s /usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py:296: in __init__ 578s self._build_paths() 578s /usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py:303: in _build_paths 578s self.path = qiime2.core.path.ProvenancePath() 578s /usr/lib/python3/dist-packages/qiime2/core/path.py:146: in __new__ 578s return cls.__new(path) 578s /usr/lib/python3/dist-packages/qiime2/core/path.py:129: in __new 578s self._destructor = weakref.finalize(self, self._destruct, str(self)) 578s /usr/lib/python3.12/pathlib.py:443: in __str__ 578s self._str = self._format_parsed_parts(self.drive, self.root, 578s /usr/lib/python3.12/pathlib.py:557: in drive 578s self._load_parts() 578s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 578s 578s self = <[AttributeError("'ProvenancePath' object has no attribute '_raw_paths'") raised in repr()] ProvenancePath object at 0x7217bb09c6d0> 578s 578s def _load_parts(self): 578s > paths = self._raw_paths 578s E AttributeError: 'ProvenancePath' object has no attribute '_raw_paths' 578s 578s /usr/lib/python3.12/pathlib.py:408: AttributeError 578s ________________________ FilterTests.test_q_score_real _________________________ 578s 578s self = <[AttributeError("'ProvenancePath' object has no attribute '_raw_paths'") raised in repr()] ProvenancePath object at 0x7217baf305d0> 578s 578s def __str__(self): 578s """Return the string representation of the path, suitable for 578s passing to system calls.""" 578s try: 578s > return self._str 578s E AttributeError: 'ProvenancePath' object has no attribute '_str' 578s 578s /usr/lib/python3.12/pathlib.py:441: AttributeError 578s 578s During handling of the above exception, another exception occurred: 578s 578s self = <[AttributeError("'ProvenancePath' object has no attribute '_raw_paths'") raised in repr()] ProvenancePath object at 0x7217baf305d0> 578s 578s @property 578s def drive(self): 578s """The drive prefix (letter or UNC path), if any.""" 578s try: 578s > return self._drv 578s E AttributeError: 'ProvenancePath' object has no attribute '_drv' 578s 578s /usr/lib/python3.12/pathlib.py:555: AttributeError 578s 578s During handling of the above exception, another exception occurred: 578s 578s self = 578s 578s def test_q_score_real(self): 578s ar = Artifact.load(self.get_data_path('real_data.qza')) 578s with redirected_stdio(stdout=os.devnull): 578s > obs_ar, stats_ar = self.plugin.methods['q_score']( 578s ar, min_quality=40, min_length_fraction=0.24) 578s 578s q2_quality_filter/test/test_filter.py:163: 578s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 578s /usr/lib/python3/dist-packages/decorator.py:232: in fun 578s return caller(func, *(extras + args), **kw) 578s /usr/lib/python3/dist-packages/qiime2/sdk/action.py:321: in bound_callable 578s provenance = self._ProvCaptureCls( 578s /usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py:546: in __init__ 578s super().__init__() 578s /usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py:296: in __init__ 578s self._build_paths() 578s /usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py:303: in _build_paths 578s self.path = qiime2.core.path.ProvenancePath() 578s /usr/lib/python3/dist-packages/qiime2/core/path.py:146: in __new__ 578s return cls.__new(path) 578s /usr/lib/python3/dist-packages/qiime2/core/path.py:129: in __new 578s self._destructor = weakref.finalize(self, self._destruct, str(self)) 578s /usr/lib/python3.12/pathlib.py:443: in __str__ 578s self._str = self._format_parsed_parts(self.drive, self.root, 578s /usr/lib/python3.12/pathlib.py:557: in drive 578s self._load_parts() 578s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 578s 578s self = <[AttributeError("'ProvenancePath' object has no attribute '_raw_paths'") raised in repr()] ProvenancePath object at 0x7217baf305d0> 578s 578s def _load_parts(self): 578s > paths = self._raw_paths 578s E AttributeError: 'ProvenancePath' object has no attribute '_raw_paths' 578s 578s /usr/lib/python3.12/pathlib.py:408: AttributeError 578s _____________________ FilterTests.test_q_score_real_joined _____________________ 578s 578s self = <[AttributeError("'ProvenancePath' object has no attribute '_raw_paths'") raised in repr()] ProvenancePath object at 0x7217bb4a42d0> 578s 578s def __str__(self): 578s """Return the string representation of the path, suitable for 578s passing to system calls.""" 578s try: 578s > return self._str 578s E AttributeError: 'ProvenancePath' object has no attribute '_str' 578s 578s /usr/lib/python3.12/pathlib.py:441: AttributeError 578s 578s During handling of the above exception, another exception occurred: 578s 578s self = <[AttributeError("'ProvenancePath' object has no attribute '_raw_paths'") raised in repr()] ProvenancePath object at 0x7217bb4a42d0> 578s 578s @property 578s def drive(self): 578s """The drive prefix (letter or UNC path), if any.""" 578s try: 578s > return self._drv 578s E AttributeError: 'ProvenancePath' object has no attribute '_drv' 578s 578s /usr/lib/python3.12/pathlib.py:555: AttributeError 578s 578s During handling of the above exception, another exception occurred: 578s 578s self = 578s 578s def test_q_score_real_joined(self): 578s ar = Artifact.load(self.get_data_path('real_data_joined.qza')) 578s with redirected_stdio(stdout=os.devnull): 578s > obs_ar, stats_ar = self.plugin.methods['q_score']( 578s ar, min_quality=40, min_length_fraction=0.24) 578s 578s q2_quality_filter/test/test_filter.py:248: 578s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 578s /usr/lib/python3/dist-packages/decorator.py:232: in fun 578s return caller(func, *(extras + args), **kw) 578s /usr/lib/python3/dist-packages/qiime2/sdk/action.py:321: in bound_callable 578s provenance = self._ProvCaptureCls( 578s /usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py:546: in __init__ 578s super().__init__() 578s /usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py:296: in __init__ 578s self._build_paths() 578s /usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py:303: in _build_paths 578s self.path = qiime2.core.path.ProvenancePath() 578s /usr/lib/python3/dist-packages/qiime2/core/path.py:146: in __new__ 578s return cls.__new(path) 578s /usr/lib/python3/dist-packages/qiime2/core/path.py:129: in __new 578s self._destructor = weakref.finalize(self, self._destruct, str(self)) 578s /usr/lib/python3.12/pathlib.py:443: in __str__ 578s self._str = self._format_parsed_parts(self.drive, self.root, 578s /usr/lib/python3.12/pathlib.py:557: in drive 578s self._load_parts() 578s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 578s 578s self = <[AttributeError("'ProvenancePath' object has no attribute '_raw_paths'") raised in repr()] ProvenancePath object at 0x7217bb4a42d0> 578s 578s def _load_parts(self): 578s > paths = self._raw_paths 578s E AttributeError: 'ProvenancePath' object has no attribute '_raw_paths' 578s 578s /usr/lib/python3.12/pathlib.py:408: AttributeError 578s =============================== warnings summary =============================== 578s ../../../usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py:13 578s /usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py:13: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html 578s import pkg_resources 578s 578s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 578s 578s ---------- coverage: platform linux, python 3.12.4-final-0 ----------- 578s Name Stmts Miss Cover 578s ----------------------------------------------------------- 578s q2_quality_filter/__init__.py 5 0 100% 578s q2_quality_filter/_examples.py 6 4 33% 578s q2_quality_filter/_filter.py 90 64 29% 578s q2_quality_filter/_format.py 8 4 50% 578s q2_quality_filter/_transformer.py 20 4 80% 578s q2_quality_filter/_type.py 2 0 100% 578s q2_quality_filter/_version.py 4 0 100% 578s q2_quality_filter/plugin_setup.py 20 0 100% 578s q2_quality_filter/test/__init__.py 0 0 100% 578s q2_quality_filter/test/test_filter.py 146 58 60% 578s ----------------------------------------------------------- 578s TOTAL 301 134 55% 578s 578s =========================== short test summary info ============================ 578s FAILED q2_quality_filter/test/test_filter.py::FilterTests::test_q_score - Att... 578s FAILED q2_quality_filter/test/test_filter.py::FilterTests::test_q_score_all_dropped 578s FAILED q2_quality_filter/test/test_filter.py::FilterTests::test_q_score_numeric_ids 578s FAILED q2_quality_filter/test/test_filter.py::FilterTests::test_q_score_real 578s FAILED q2_quality_filter/test/test_filter.py::FilterTests::test_q_score_real_joined 578s ============== 5 failed, 5 passed, 1 skipped, 1 warning in 11.87s ============== 578s autopkgtest [09:15:15]: test run-unit-test: -----------------------] 579s autopkgtest [09:15:16]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 579s run-unit-test FAIL non-zero exit status 1 579s autopkgtest [09:15:16]: @@@@@@@@@@@@@@@@@@@@ summary 579s run-unit-test FAIL non-zero exit status 1 590s nova [W] Using flock in scalingstack-bos02-ppc64el 590s flock: timeout while waiting to get lock 590s Creating nova instance adt-oracular-ppc64el-q2-quality-filter-20240708-090415-juju-7f2275-prod-proposed-migration-environment-2-d0e05b71-67e9-487f-a2bd-a5d2875dcbab from image adt/ubuntu-oracular-ppc64el-server-20240707.img (UUID 481deef1-397b-4a9c-a18e-d3c5753cb89e)...