0s autopkgtest [01:24:00]: starting date and time: 2024-06-08 01:24:00+0000 0s autopkgtest [01:24:00]: git checkout: 433ed4cb Merge branch 'skia/nova_flock' into 'ubuntu/5.34+prod' 0s autopkgtest [01:24:00]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.2tih7m05/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:pytest,src:astropy --apt-upgrade python-pot --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=pytest/8.2.2-1ubuntu1 astropy/6.0.1-4' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-ppc64el-8.secgroup --name adt-oracular-ppc64el-python-pot-20240608-012400-juju-7f2275-prod-proposed-migration-environment-2-35786075-e394-4bea-bb76-b48f7c750fe9 --image adt/ubuntu-oracular-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 138s autopkgtest [01:26:18]: testbed dpkg architecture: ppc64el 139s autopkgtest [01:26:19]: testbed apt version: 2.9.3 139s autopkgtest [01:26:19]: @@@@@@@@@@@@@@@@@@@@ test bed setup 139s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [110 kB] 140s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [2864 B] 140s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [339 kB] 140s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [44.3 kB] 140s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [7972 B] 140s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el Packages [54.3 kB] 140s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/restricted ppc64el Packages [1860 B] 140s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/universe ppc64el Packages [303 kB] 140s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse ppc64el Packages [1768 B] 140s Fetched 866 kB in 1s (899 kB/s) 140s Reading package lists... 143s Reading package lists... 143s Building dependency tree... 143s Reading state information... 143s Calculating upgrade... 143s The following packages will be upgraded: 143s debianutils libheif-plugin-aomdec libheif-plugin-aomenc 143s libheif-plugin-libde265 libheif1 libnetplan1 netplan-generator netplan.io 143s python3-netplan 144s 9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 144s Need to get 731 kB of archives. 144s After this operation, 5120 B of additional disk space will be used. 144s Get:1 http://ftpmaster.internal/ubuntu oracular/main ppc64el debianutils ppc64el 5.18 [90.5 kB] 144s Get:2 http://ftpmaster.internal/ubuntu oracular/main ppc64el netplan-generator ppc64el 1.0-3ubuntu1 [59.3 kB] 144s Get:3 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-netplan ppc64el 1.0-3ubuntu1 [21.8 kB] 144s Get:4 http://ftpmaster.internal/ubuntu oracular/main ppc64el netplan.io ppc64el 1.0-3ubuntu1 [66.6 kB] 144s Get:5 http://ftpmaster.internal/ubuntu oracular/main ppc64el libnetplan1 ppc64el 1.0-3ubuntu1 [138 kB] 144s Get:6 http://ftpmaster.internal/ubuntu oracular/main ppc64el libheif-plugin-aomdec ppc64el 1.17.6-3 [10.2 kB] 144s Get:7 http://ftpmaster.internal/ubuntu oracular/main ppc64el libheif-plugin-aomenc ppc64el 1.17.6-3 [16.6 kB] 144s Get:8 http://ftpmaster.internal/ubuntu oracular/main ppc64el libheif1 ppc64el 1.17.6-3 [320 kB] 144s Get:9 http://ftpmaster.internal/ubuntu oracular/main ppc64el libheif-plugin-libde265 ppc64el 1.17.6-3 [8484 B] 144s Fetched 731 kB in 1s (1456 kB/s) 144s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72602 files and directories currently installed.) 144s Preparing to unpack .../debianutils_5.18_ppc64el.deb ... 144s Unpacking debianutils (5.18) over (5.17build1) ... 145s Setting up debianutils (5.18) ... 145s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72602 files and directories currently installed.) 145s Preparing to unpack .../0-netplan-generator_1.0-3ubuntu1_ppc64el.deb ... 145s Adding 'diversion of /lib/systemd/system-generators/netplan to /lib/systemd/system-generators/netplan.usr-is-merged by netplan-generator' 145s Unpacking netplan-generator (1.0-3ubuntu1) over (1.0-2ubuntu1) ... 145s Preparing to unpack .../1-python3-netplan_1.0-3ubuntu1_ppc64el.deb ... 145s Unpacking python3-netplan (1.0-3ubuntu1) over (1.0-2ubuntu1) ... 145s Preparing to unpack .../2-netplan.io_1.0-3ubuntu1_ppc64el.deb ... 145s Unpacking netplan.io (1.0-3ubuntu1) over (1.0-2ubuntu1) ... 145s Preparing to unpack .../3-libnetplan1_1.0-3ubuntu1_ppc64el.deb ... 145s Unpacking libnetplan1:ppc64el (1.0-3ubuntu1) over (1.0-2ubuntu1) ... 145s Preparing to unpack .../4-libheif-plugin-aomdec_1.17.6-3_ppc64el.deb ... 145s Unpacking libheif-plugin-aomdec:ppc64el (1.17.6-3) over (1.17.6-1ubuntu4) ... 145s Preparing to unpack .../5-libheif-plugin-aomenc_1.17.6-3_ppc64el.deb ... 145s Unpacking libheif-plugin-aomenc:ppc64el (1.17.6-3) over (1.17.6-1ubuntu4) ... 145s Preparing to unpack .../6-libheif1_1.17.6-3_ppc64el.deb ... 145s Unpacking libheif1:ppc64el (1.17.6-3) over (1.17.6-1ubuntu4) ... 145s Preparing to unpack .../7-libheif-plugin-libde265_1.17.6-3_ppc64el.deb ... 145s Unpacking libheif-plugin-libde265:ppc64el (1.17.6-3) over (1.17.6-1ubuntu4) ... 145s Setting up libnetplan1:ppc64el (1.0-3ubuntu1) ... 145s Setting up python3-netplan (1.0-3ubuntu1) ... 145s Setting up netplan-generator (1.0-3ubuntu1) ... 145s Removing 'diversion of /lib/systemd/system-generators/netplan to /lib/systemd/system-generators/netplan.usr-is-merged by netplan-generator' 145s Setting up netplan.io (1.0-3ubuntu1) ... 145s Setting up libheif-plugin-aomdec:ppc64el (1.17.6-3) ... 145s Setting up libheif-plugin-libde265:ppc64el (1.17.6-3) ... 145s Setting up libheif1:ppc64el (1.17.6-3) ... 145s Setting up libheif-plugin-aomenc:ppc64el (1.17.6-3) ... 145s Processing triggers for libc-bin (2.39-0ubuntu8.1) ... 145s Processing triggers for man-db (2.12.1-1) ... 147s Processing triggers for dbus (1.14.10-4ubuntu4) ... 147s Reading package lists... 147s Building dependency tree... 147s Reading state information... 147s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 148s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 148s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease 148s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 148s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 149s Reading package lists... 149s Reading package lists... 149s Building dependency tree... 149s Reading state information... 150s Calculating upgrade... 150s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 150s Reading package lists... 150s Building dependency tree... 150s Reading state information... 150s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 153s autopkgtest [01:26:33]: testbed running kernel: Linux 6.8.0-31-generic #31-Ubuntu SMP Sat Apr 20 00:05:55 UTC 2024 153s autopkgtest [01:26:33]: @@@@@@@@@@@@@@@@@@@@ apt-source python-pot 155s Get:1 http://ftpmaster.internal/ubuntu oracular/universe python-pot 0.9.3+dfsg-2 (dsc) [2114 B] 155s Get:2 http://ftpmaster.internal/ubuntu oracular/universe python-pot 0.9.3+dfsg-2 (tar) [877 kB] 155s Get:3 http://ftpmaster.internal/ubuntu oracular/universe python-pot 0.9.3+dfsg-2 (diff) [4524 B] 156s gpgv: Signature made Thu Apr 18 12:47:08 2024 UTC 156s gpgv: using RSA key CFC5EF8510851E7355B55E809D11582AFD548CFA 156s gpgv: issuer "gspr@nonempty.org" 156s gpgv: Can't check signature: No public key 156s dpkg-source: warning: cannot verify inline signature for ./python-pot_0.9.3+dfsg-2.dsc: no acceptable signature found 156s autopkgtest [01:26:36]: testing package python-pot version 0.9.3+dfsg-2 156s autopkgtest [01:26:36]: build not needed 157s autopkgtest [01:26:37]: test upstream.sh: preparing testbed 158s Reading package lists... 158s Building dependency tree... 158s Reading state information... 158s Starting pkgProblemResolver with broken count: 0 158s Starting 2 pkgProblemResolver with broken count: 0 158s Done 159s The following additional packages will be installed: 159s libblas3 libgfortran5 libgomp1 liblapack3 liblbfgsb0 python3-all 159s python3-decorator python3-iniconfig python3-joblib python3-numpy 159s python3-packaging python3-pluggy python3-pot python3-pytest python3-scipy 159s python3-sklearn python3-sklearn-lib python3-threadpoolctl 159s Suggested packages: 159s gcc gfortran python-numpy-doc python3-dev python-scipy-doc python3-dap 159s python-sklearn-doc ipython3 159s Recommended packages: 159s python3-simplejson python3-psutil g++ | c++-compiler python3-pil 159s python3-matplotlib 159s The following NEW packages will be installed: 159s autopkgtest-satdep libblas3 libgfortran5 libgomp1 liblapack3 liblbfgsb0 159s python3-all python3-decorator python3-iniconfig python3-joblib python3-numpy 159s python3-packaging python3-pluggy python3-pot python3-pytest python3-scipy 159s python3-sklearn python3-sklearn-lib python3-threadpoolctl 159s 0 upgraded, 19 newly installed, 0 to remove and 0 not upgraded. 159s Need to get 31.9 MB/31.9 MB of archives. 159s After this operation, 151 MB of additional disk space will be used. 159s Get:1 /tmp/autopkgtest.C42Czb/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [728 B] 159s Get:2 http://ftpmaster.internal/ubuntu oracular/main ppc64el libblas3 ppc64el 3.12.0-3build1 [227 kB] 159s Get:3 http://ftpmaster.internal/ubuntu oracular/main ppc64el libgfortran5 ppc64el 14.1.0-1ubuntu1 [573 kB] 159s Get:4 http://ftpmaster.internal/ubuntu oracular/main ppc64el libgomp1 ppc64el 14.1.0-1ubuntu1 [161 kB] 159s Get:5 http://ftpmaster.internal/ubuntu oracular/main ppc64el liblapack3 ppc64el 3.12.0-3build1 [2804 kB] 159s Get:6 http://ftpmaster.internal/ubuntu oracular/universe ppc64el liblbfgsb0 ppc64el 3.0+dfsg.4-1build1 [33.0 kB] 159s Get:7 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-all ppc64el 3.12.3-0ubuntu1 [888 B] 159s Get:8 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-decorator all 5.1.1-5 [10.1 kB] 159s Get:9 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-iniconfig all 1.1.1-2 [6024 B] 159s Get:10 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-joblib all 1.3.2-2 [208 kB] 159s Get:11 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-numpy ppc64el 1:1.26.4+ds-10 [4408 kB] 160s Get:12 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-packaging all 24.0-1 [41.1 kB] 160s Get:13 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-pluggy all 1.5.0-1 [21.0 kB] 160s Get:14 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-scipy ppc64el 1.11.4-10 [16.9 MB] 160s Get:15 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-pot ppc64el 0.9.3+dfsg-2 [218 kB] 160s Get:16 http://ftpmaster.internal/ubuntu oracular-proposed/universe ppc64el python3-pytest all 8.2.2-1ubuntu1 [250 kB] 160s Get:17 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-threadpoolctl all 3.1.0-1 [21.3 kB] 160s Get:18 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-sklearn-lib ppc64el 1.4.2+dfsg-1 [3761 kB] 160s Get:19 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-sklearn all 1.4.2+dfsg-1 [2261 kB] 161s Fetched 31.9 MB in 2s (16.1 MB/s) 161s Selecting previously unselected package libblas3:ppc64el. 161s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72602 files and directories currently installed.) 161s Preparing to unpack .../00-libblas3_3.12.0-3build1_ppc64el.deb ... 161s Unpacking libblas3:ppc64el (3.12.0-3build1) ... 161s Selecting previously unselected package libgfortran5:ppc64el. 161s Preparing to unpack .../01-libgfortran5_14.1.0-1ubuntu1_ppc64el.deb ... 161s Unpacking libgfortran5:ppc64el (14.1.0-1ubuntu1) ... 161s Selecting previously unselected package libgomp1:ppc64el. 161s Preparing to unpack .../02-libgomp1_14.1.0-1ubuntu1_ppc64el.deb ... 161s Unpacking libgomp1:ppc64el (14.1.0-1ubuntu1) ... 161s Selecting previously unselected package liblapack3:ppc64el. 161s Preparing to unpack .../03-liblapack3_3.12.0-3build1_ppc64el.deb ... 161s Unpacking liblapack3:ppc64el (3.12.0-3build1) ... 161s Selecting previously unselected package liblbfgsb0:ppc64el. 161s Preparing to unpack .../04-liblbfgsb0_3.0+dfsg.4-1build1_ppc64el.deb ... 161s Unpacking liblbfgsb0:ppc64el (3.0+dfsg.4-1build1) ... 161s Selecting previously unselected package python3-all. 161s Preparing to unpack .../05-python3-all_3.12.3-0ubuntu1_ppc64el.deb ... 161s Unpacking python3-all (3.12.3-0ubuntu1) ... 161s Selecting previously unselected package python3-decorator. 161s Preparing to unpack .../06-python3-decorator_5.1.1-5_all.deb ... 161s Unpacking python3-decorator (5.1.1-5) ... 161s Selecting previously unselected package python3-iniconfig. 161s Preparing to unpack .../07-python3-iniconfig_1.1.1-2_all.deb ... 161s Unpacking python3-iniconfig (1.1.1-2) ... 161s Selecting previously unselected package python3-joblib. 161s Preparing to unpack .../08-python3-joblib_1.3.2-2_all.deb ... 161s Unpacking python3-joblib (1.3.2-2) ... 161s Selecting previously unselected package python3-numpy. 161s Preparing to unpack .../09-python3-numpy_1%3a1.26.4+ds-10_ppc64el.deb ... 161s Unpacking python3-numpy (1:1.26.4+ds-10) ... 161s Selecting previously unselected package python3-packaging. 162s Preparing to unpack .../10-python3-packaging_24.0-1_all.deb ... 162s Unpacking python3-packaging (24.0-1) ... 162s Selecting previously unselected package python3-pluggy. 162s Preparing to unpack .../11-python3-pluggy_1.5.0-1_all.deb ... 162s Unpacking python3-pluggy (1.5.0-1) ... 162s Selecting previously unselected package python3-scipy. 162s Preparing to unpack .../12-python3-scipy_1.11.4-10_ppc64el.deb ... 162s Unpacking python3-scipy (1.11.4-10) ... 162s Selecting previously unselected package python3-pot. 162s Preparing to unpack .../13-python3-pot_0.9.3+dfsg-2_ppc64el.deb ... 162s Unpacking python3-pot (0.9.3+dfsg-2) ... 162s Selecting previously unselected package python3-pytest. 162s Preparing to unpack .../14-python3-pytest_8.2.2-1ubuntu1_all.deb ... 162s Unpacking python3-pytest (8.2.2-1ubuntu1) ... 162s Selecting previously unselected package python3-threadpoolctl. 162s Preparing to unpack .../15-python3-threadpoolctl_3.1.0-1_all.deb ... 162s Unpacking python3-threadpoolctl (3.1.0-1) ... 162s Selecting previously unselected package python3-sklearn-lib:ppc64el. 162s Preparing to unpack .../16-python3-sklearn-lib_1.4.2+dfsg-1_ppc64el.deb ... 162s Unpacking python3-sklearn-lib:ppc64el (1.4.2+dfsg-1) ... 163s Selecting previously unselected package python3-sklearn. 163s Preparing to unpack .../17-python3-sklearn_1.4.2+dfsg-1_all.deb ... 163s Unpacking python3-sklearn (1.4.2+dfsg-1) ... 163s Selecting previously unselected package autopkgtest-satdep. 163s Preparing to unpack .../18-1-autopkgtest-satdep.deb ... 163s Unpacking autopkgtest-satdep (0) ... 163s Setting up python3-iniconfig (1.1.1-2) ... 163s Setting up python3-joblib (1.3.2-2) ... 163s Setting up python3-threadpoolctl (3.1.0-1) ... 164s Setting up python3-all (3.12.3-0ubuntu1) ... 164s Setting up libgomp1:ppc64el (14.1.0-1ubuntu1) ... 164s Setting up python3-decorator (5.1.1-5) ... 164s Setting up libblas3:ppc64el (3.12.0-3build1) ... 164s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 164s Setting up python3-packaging (24.0-1) ... 164s Setting up libgfortran5:ppc64el (14.1.0-1ubuntu1) ... 164s Setting up python3-pluggy (1.5.0-1) ... 164s Setting up liblapack3:ppc64el (3.12.0-3build1) ... 164s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 164s Setting up python3-pytest (8.2.2-1ubuntu1) ... 165s Setting up python3-numpy (1:1.26.4+ds-10) ... 167s Setting up liblbfgsb0:ppc64el (3.0+dfsg.4-1build1) ... 167s Setting up python3-scipy (1.11.4-10) ... 172s Setting up python3-pot (0.9.3+dfsg-2) ... 172s /usr/lib/python3/dist-packages/ot/gnn/_layers.py:62: SyntaxWarning: invalid escape sequence '\o' 172s """ 172s /usr/lib/python3/dist-packages/ot/gnn/_layers.py:189: SyntaxWarning: invalid escape sequence '\o' 172s """ 172s Setting up python3-sklearn-lib:ppc64el (1.4.2+dfsg-1) ... 172s Setting up python3-sklearn (1.4.2+dfsg-1) ... 175s Setting up autopkgtest-satdep (0) ... 175s Processing triggers for man-db (2.12.1-1) ... 175s Processing triggers for libc-bin (2.39-0ubuntu8.1) ... 178s (Reading database ... 76144 files and directories currently installed.) 178s Removing autopkgtest-satdep (0) ... 178s autopkgtest [01:26:58]: test upstream.sh: [----------------------- 178s Running tests with Python 3.12. 180s ============================= test session starts ============================== 180s platform linux -- Python 3.12.3, pytest-8.2.2, pluggy-1.5.0 180s rootdir: /tmp/autopkgtest.C42Czb/autopkgtest_tmp 180s collected 586 items 180s 180s test/test_1d_solver.py ...s..s...... [ 2%] 180s test/test_backend.py .......... [ 3%] 189s test/test_bregman.py ......................................sss.......... [ 12%] 198s .....................................ss....ss..ss..s....... [ 22%] 200s test/test_coot.py ......... [ 24%] 202s test/test_da.py .....................s.. [ 28%] 202s test/test_dmmot.py .. [ 28%] 202s test/test_dr.py ssssss [ 29%] 203s test/test_factored.py .. [ 30%] 210s test/test_gaussian.py .................. [ 33%] 210s test/test_gnn.py ssss [ 33%] 227s test/test_gromov.py ....s....x..x..x.............................x...... [ 42%] 227s .. [ 43%] 231s test/test_lowrank.py ........... [ 44%] 231s test/test_mapping.py sss. [ 45%] 232s test/test_optim.py ...... [ 46%] 233s test/test_ot.py ....s..........s.. [ 49%] 235s test/test_partial.py ...... [ 50%] 235s test/test_plot.py ss [ 51%] 236s test/test_regpath.py .. [ 51%] 237s test/test_sliced.py ...........s..s............. [ 56%] 237s test/test_smooth.py ... [ 56%] 242s test/test_solvers.py ........................s.....s.....s.............. [ 65%] 246s ............ssssssss........ssssssss........................ssssssss.... [ 77%] 255s ....ssssssss...ss............. [ 82%] 261s test/test_stochastic.py ......... [ 84%] 266s test/test_unbalanced.py ................................................ [ 92%] 281s ................ [ 95%] 281s test/test_utils.py .......................... [ 99%] 282s test/test_weak.py .. [100%] 282s 282s =============================== warnings summary =============================== 282s test/test_bregman.py::test_nan_warning[sinkhorn] 282s /usr/lib/python3/dist-packages/ot/bregman/_sinkhorn.py:489: RuntimeWarning: divide by zero encountered in divide 282s K = nx.exp(M / (-reg)) 282s 282s test/test_bregman.py::test_nan_warning[sinkhorn] 282s /usr/lib/python3/dist-packages/ot/bregman/_sinkhorn.py:489: RuntimeWarning: invalid value encountered in divide 282s K = nx.exp(M / (-reg)) 282s 282s test/test_bregman.py::test_nan_warning[sinkhorn_stabilized] 282s /usr/lib/python3/dist-packages/ot/bregman/_sinkhorn.py:1077: RuntimeWarning: divide by zero encountered in divide 282s return nx.exp(-(M - alpha.reshape((dim_a, 1)) 282s 282s test/test_bregman.py::test_nan_warning[sinkhorn_stabilized] 282s /usr/lib/python3/dist-packages/ot/bregman/_sinkhorn.py:1077: RuntimeWarning: invalid value encountered in divide 282s return nx.exp(-(M - alpha.reshape((dim_a, 1)) 282s 282s test/test_bregman.py::test_nan_warning[sinkhorn_stabilized] 282s test/test_bregman.py::test_nan_warning[sinkhorn_stabilized] 282s /usr/lib/python3/dist-packages/ot/bregman/_sinkhorn.py:1082: RuntimeWarning: divide by zero encountered in divide 282s return nx.exp(-(M - alpha.reshape((dim_a, 1)) - beta.reshape((1, dim_b))) 282s 282s test/test_bregman.py::test_nan_warning[sinkhorn_stabilized] 282s test/test_bregman.py::test_nan_warning[sinkhorn_stabilized] 282s /usr/lib/python3/dist-packages/ot/bregman/_sinkhorn.py:1082: RuntimeWarning: invalid value encountered in divide 282s return nx.exp(-(M - alpha.reshape((dim_a, 1)) - beta.reshape((1, dim_b))) 282s 282s test/test_bregman.py: 6 warnings 282s test/test_coot.py: 1 warning 282s test/test_da.py: 2 warnings 282s test/test_gromov.py: 13 warnings 282s test/test_optim.py: 1 warning 282s test/test_partial.py: 1 warning 282s /usr/lib/python3/dist-packages/ot/bregman/_sinkhorn.py:531: UserWarning: Sinkhorn did not converge. You might want to increase the number of iterations `numItermax` or the regularization parameter `reg`. 282s warnings.warn("Sinkhorn did not converge. You might want to " 282s 282s test/test_bregman.py::test_sinkhorn_multi_b[sinkhorn_stabilized-True-True] 282s test/test_bregman.py::test_sinkhorn_multi_b[sinkhorn_stabilized-True-False] 282s test/test_bregman.py::test_sinkhorn_multi_b[sinkhorn_stabilized-False-True] 282s test/test_bregman.py::test_sinkhorn_multi_b[sinkhorn_stabilized-False-False] 282s test/test_bregman.py::test_sinkhorn_variants_dtype_device[numpy-sinkhorn_stabilized] 282s test/test_bregman.py::test_sinkhorn_variants_dtype_device[numpy-sinkhorn_epsilon_scaling] 282s test/test_bregman.py::test_sinkhorn_warmstart 282s /usr/lib/python3/dist-packages/ot/bregman/_sinkhorn.py:1145: UserWarning: Sinkhorn did not converge. You might want to increase the number of iterations `numItermax` or the regularization parameter `reg`. 282s warnings.warn("Sinkhorn did not converge. You might want to " 282s 282s test/test_bregman.py::test_sinkhorn_multi_b[sinkhorn_log-True-True] 282s test/test_bregman.py::test_sinkhorn_multi_b[sinkhorn_log-True-False] 282s test/test_bregman.py::test_sinkhorn_multi_b[sinkhorn_log-False-True] 282s test/test_bregman.py::test_sinkhorn_multi_b[sinkhorn_log-False-False] 282s test/test_bregman.py::test_sinkhorn_variants_dtype_device[numpy-sinkhorn_log] 282s /usr/lib/python3/dist-packages/ot/bregman/_sinkhorn.py:747: UserWarning: Sinkhorn did not converge. You might want to increase the number of iterations `numItermax` or the regularization parameter `reg`. 282s warnings.warn("Sinkhorn did not converge. You might want to " 282s 282s test/test_bregman.py::test_sinkhorn_empty 282s test/test_bregman.py::test_sinkhorn_variants[numpy] 282s test/test_bregman.py::test_sinkhorn_variants_dtype_device[numpy-greenkhorn] 282s test/test_bregman.py::test_sinkhorn_variants_log 282s /usr/lib/python3/dist-packages/ot/bregman/_sinkhorn.py:919: UserWarning: Sinkhorn did not converge. You might want to increase the number of iterations `numItermax` or the regularization parameter `reg`. 282s warnings.warn("Sinkhorn did not converge. You might want to " 282s 282s test/test_coot.py::test_coot[numpy-False] 282s test/test_coot.py::test_coot[numpy-True] 282s test/test_coot.py::test_coot[numpy-1] 282s test/test_coot.py::test_coot[numpy-0] 282s test/test_coot.py::test_coot_warmstart[numpy] 282s test/test_coot.py::test_coot_log[numpy] 282s /usr/lib/python3/dist-packages/ot/lp/__init__.py:354: UserWarning: numItermax reached before optimality. Try to increase numItermax. 282s result_code_string = check_result(result_code) 282s 282s test/test_gromov.py::test_gromov_integer_warnings[numpy] 282s /tmp/autopkgtest.C42Czb/autopkgtest_tmp/test/test_gromov.py:145: UserWarning: Input structure matrix consists of integer. The transport plan will be casted accordingly, possibly resulting in a loss of precision. If this behaviour is unwanted, please make sure your input structure matrix consists of floating point elements. 282s G = ot.gromov.gromov_wasserstein( 282s 282s test/test_gromov.py::test_gromov_integer_warnings[numpy] 282s /tmp/autopkgtest.C42Czb/autopkgtest_tmp/test/test_gromov.py:148: UserWarning: Input structure matrix consists of integer. The transport plan will be casted accordingly, possibly resulting in a loss of precision. If this behaviour is unwanted, please make sure your input structure matrix consists of floating point elements. 282s Gb = nx.to_numpy(ot.gromov.gromov_wasserstein( 282s 282s test/test_gromov.py::test_BAPG_gromov[numpy] 282s /usr/lib/python3/dist-packages/ot/gromov/_bregman.py:507: RuntimeWarning: divide by zero encountered in divide 282s column_scaling = q / nx.sum(T, 0) 282s 282s test/test_gromov.py::test_BAPG_gromov[numpy] 282s /usr/lib/python3/dist-packages/ot/gromov/_bregman.py:508: RuntimeWarning: invalid value encountered in multiply 282s T = nx.reshape(column_scaling, (1, -1)) * T 282s 282s test/test_gromov.py::test_BAPG_fgw[numpy] 282s /usr/lib/python3/dist-packages/ot/gromov/_bregman.py:1352: RuntimeWarning: divide by zero encountered in divide 282s row_scaling = p / nx.sum(T, 1) 282s 282s test/test_gromov.py::test_BAPG_fgw[numpy] 282s /usr/lib/python3/dist-packages/ot/gromov/_bregman.py:1353: RuntimeWarning: invalid value encountered in multiply 282s T = nx.reshape(row_scaling, (-1, 1)) * T 282s 282s test/test_gromov.py::test_entropic_fgw_barycenter[numpy] 282s /usr/lib/python3/dist-packages/ot/backend.py:1143: RuntimeWarning: divide by zero encountered in log 282s return np.log(a) 282s 282s test/test_gromov.py::test_entropic_fgw_barycenter[numpy] 282s /usr/lib/python3/dist-packages/ot/bregman/_sinkhorn.py:498: RuntimeWarning: divide by zero encountered in divide 282s v = b / KtransposeU 282s 282s test/test_gromov.py::test_entropic_fgw_barycenter[numpy] 282s /usr/lib/python3/dist-packages/ot/bregman/_sinkhorn.py:498: RuntimeWarning: overflow encountered in divide 282s v = b / KtransposeU 282s 282s test/test_gromov.py::test_entropic_fgw_barycenter[numpy] 282s test/test_gromov.py::test_gromov_entropic_barycenter[numpy] 282s /usr/lib/python3/dist-packages/ot/bregman/_sinkhorn.py:506: UserWarning: Warning: numerical errors at iteration 0 282s warnings.warn('Warning: numerical errors at iteration %d' % ii) 282s 282s test/test_gromov.py::test_entropic_fgw_barycenter[numpy] 282s /usr/lib/python3/dist-packages/ot/gromov/_bregman.py:1045: UserWarning: Solver failed to produce a transport plan. You might want to increase the regularization parameter `epsilon`. 282s warnings.warn("Solver failed to produce a transport plan. You might " 282s 282s test/test_gromov.py::test_pointwise_gromov[numpy] 282s test/test_gromov.py::test_pointwise_gromov[numpy] 282s test/test_gromov.py::test_pointwise_gromov[numpy] 282s test/test_gromov.py::test_pointwise_gromov[numpy] 282s /usr/lib/python3/dist-packages/ot/gromov/_estimators.py:222: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 282s index[0] = generator.choice(len_p, size=1, p=nx.to_numpy(p)) 282s 282s test/test_gromov.py::test_pointwise_gromov[numpy] 282s test/test_gromov.py::test_pointwise_gromov[numpy] 282s test/test_gromov.py::test_pointwise_gromov[numpy] 282s test/test_gromov.py::test_pointwise_gromov[numpy] 282s /usr/lib/python3/dist-packages/ot/gromov/_estimators.py:223: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 282s index[1] = generator.choice(len_q, size=1, p=nx.to_numpy(q)) 282s 282s test/test_gromov.py: 400 warnings 282s /usr/lib/python3/dist-packages/ot/gromov/_estimators.py:228: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 282s index[0] = generator.choice(len_p, size=1, p=nx.to_numpy(p)) 282s 282s test/test_gromov.py: 400 warnings 282s /usr/lib/python3/dist-packages/ot/gromov/_estimators.py:230: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 282s index[1] = generator.choice( 282s 282s test/test_gromov.py::test_gromov_entropic_barycenter[numpy] 282s /usr/lib/python3/dist-packages/ot/gromov/_bregman.py:218: UserWarning: Solver failed to produce a transport plan. You might want to increase the regularization parameter `epsilon`. 282s warnings.warn("Solver failed to produce a transport plan. You might " 282s 282s test/test_gromov.py::test_fgw_integer_warnings[numpy] 282s /tmp/autopkgtest.C42Czb/autopkgtest_tmp/test/test_gromov.py:1580: UserWarning: Input feature matrix consists of integer. The transport plan will be casted accordingly, possibly resulting in a loss of precision. If this behaviour is unwanted, please make sure your input feature matrix consists of floating point elements. 282s G, log = ot.gromov.fused_gromov_wasserstein( 282s 282s test/test_gromov.py::test_fgw_integer_warnings[numpy] 282s /tmp/autopkgtest.C42Czb/autopkgtest_tmp/test/test_gromov.py:1583: UserWarning: Input feature matrix consists of integer. The transport plan will be casted accordingly, possibly resulting in a loss of precision. If this behaviour is unwanted, please make sure your input feature matrix consists of floating point elements. 282s Gb, logb = ot.gromov.fused_gromov_wasserstein( 282s 282s test/test_regpath.py: 232 warnings 282s /usr/lib/python3/dist-packages/ot/regpath.py:488: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 282s M[-1, -1] = 1 / s 282s 282s test/test_sliced.py::test_sliced_sphere_backend_type_devices[numpy] 282s /usr/lib/python3/dist-packages/ot/lp/solver_1d.py:733: RuntimeWarning: divide by zero encountered in divide 282s tc[mask_end > 0] = ((Ctp - Ctm + tm * dCptm - tp * dCmtp) / (dCptm - dCmtp))[mask_end > 0] 282s 282s test/test_sliced.py::test_sliced_sphere_backend_type_devices[numpy] 282s /usr/lib/python3/dist-packages/ot/lp/solver_1d.py:733: RuntimeWarning: invalid value encountered in divide 282s tc[mask_end > 0] = ((Ctp - Ctm + tm * dCptm - tp * dCmtp) / (dCptm - dCmtp))[mask_end > 0] 282s 282s test/test_unbalanced.py::test_unbalanced_convergence[numpy-sinkhorn_reg_scaling-kl] 282s test/test_unbalanced.py::test_unbalanced_convergence[numpy-sinkhorn_reg_scaling-entropy] 282s test/test_unbalanced.py::test_unbalanced_warmstart[numpy-sinkhorn_reg_scaling-kl] 282s test/test_unbalanced.py::test_unbalanced_warmstart[numpy-sinkhorn_reg_scaling-entropy] 282s test/test_unbalanced.py::test_unbalanced_relaxation_parameters[numpy-sinkhorn_reg_scaling-1] 282s test/test_unbalanced.py::test_unbalanced_relaxation_parameters[numpy-sinkhorn_reg_scaling-inf] 282s test/test_unbalanced.py::test_unbalanced_multiple_inputs[numpy-sinkhorn_reg_scaling] 282s /usr/lib/python3/dist-packages/ot/unbalanced.py:158: UserWarning: Method not implemented yet. Using classic Sinkhorn-Knopp 282s warnings.warn('Method not implemented yet. Using classic Sinkhorn-Knopp') 282s 282s test/test_unbalanced.py::test_unbalanced_convergence[numpy-sinkhorn_reg_scaling-kl] 282s test/test_unbalanced.py::test_unbalanced_convergence[numpy-sinkhorn_reg_scaling-entropy] 282s test/test_unbalanced.py::test_unbalanced_warmstart[numpy-sinkhorn_reg_scaling-kl] 282s test/test_unbalanced.py::test_unbalanced_warmstart[numpy-sinkhorn_reg_scaling-entropy] 282s test/test_unbalanced.py::test_sinkhorn_unbalanced2[numpy-sinkhorn_reg_scaling-kl-True] 282s test/test_unbalanced.py::test_sinkhorn_unbalanced2[numpy-sinkhorn_reg_scaling-kl-False] 282s test/test_unbalanced.py::test_sinkhorn_unbalanced2[numpy-sinkhorn_reg_scaling-entropy-True] 282s test/test_unbalanced.py::test_sinkhorn_unbalanced2[numpy-sinkhorn_reg_scaling-entropy-False] 282s /usr/lib/python3/dist-packages/ot/unbalanced.py:295: UserWarning: Method not implemented yet. Using classic Sinkhorn-Knopp 282s warnings.warn('Method not implemented yet. Using classic Sinkhorn-Knopp') 282s 282s test/test_unbalanced.py::test_unbalanced_relaxation_parameters[numpy-sinkhorn-inf] 282s test/test_unbalanced.py::test_unbalanced_relaxation_parameters[numpy-sinkhorn_reg_scaling-inf] 282s /usr/lib/python3/dist-packages/ot/unbalanced.py:487: RuntimeWarning: overflow encountered in divide 282s v = (b / Ktu) ** fi_2 282s 282s test/test_unbalanced.py::test_unbalanced_relaxation_parameters[numpy-sinkhorn-inf] 282s test/test_unbalanced.py::test_unbalanced_relaxation_parameters[numpy-sinkhorn_reg_scaling-inf] 282s /usr/lib/python3/dist-packages/ot/unbalanced.py:494: UserWarning: Numerical errors at iteration 180 282s warnings.warn('Numerical errors at iteration %s' % i) 282s 282s test/test_unbalanced.py::test_unbalanced_relaxation_parameters[numpy-sinkhorn_stabilized-inf] 282s /usr/lib/python3/dist-packages/ot/unbalanced.py:748: UserWarning: Stabilized Unbalanced Sinkhorn did not converge.Try a larger entropy `reg` or a lower mass `reg_m`.Or a larger absorption threshold `tau`. 282s warnings.warn("Stabilized Unbalanced Sinkhorn did not converge." + 282s 282s test/test_unbalanced.py::test_mm_wrong_divergence[numpy] 282s /usr/lib/python3/dist-packages/ot/unbalanced.py:1263: UserWarning: The div parameter should be either equal to 'kl' or 'l2': it has been set to 'kl'. 282s warnings.warn("The div parameter should be either equal to 'kl' or \ 282s 282s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 282s ==== 512 passed, 70 skipped, 4 xfailed, 1132 warnings in 102.27s (0:01:42) ===== 282s ********** 282s autopkgtest [01:28:42]: test upstream.sh: -----------------------] 283s autopkgtest [01:28:43]: test upstream.sh: - - - - - - - - - - results - - - - - - - - - - 283s upstream.sh PASS 283s autopkgtest [01:28:43]: @@@@@@@@@@@@@@@@@@@@ summary 283s upstream.sh PASS 294s nova [W] Using flock in scalingstack-bos02-ppc64el 294s flock: timeout while waiting to get lock 294s Creating nova instance adt-oracular-ppc64el-python-pot-20240608-012400-juju-7f2275-prod-proposed-migration-environment-2-35786075-e394-4bea-bb76-b48f7c750fe9 from image adt/ubuntu-oracular-ppc64el-server-20240607.img (UUID 2e7ff4dd-25ad-4882-8618-1243d2d4ac8e)...