0s autopkgtest [23:20:57]: starting date and time: 2024-07-12 23:20:57+0000 0s autopkgtest [23:20:57]: git checkout: fd3bed09 nova: allow more retries for quota issues 0s autopkgtest [23:20:57]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.nrgi501k/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade pybigwig --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.39-3.1ubuntu3 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos02-ppc64el-17.secgroup --name adt-oracular-ppc64el-pybigwig-20240712-232057-juju-7f2275-prod-proposed-migration-environment-3-8d89f500-4784-431c-aeea-09e6f9e78b61 --image adt/ubuntu-oracular-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 92s autopkgtest [23:22:29]: testbed dpkg architecture: ppc64el 92s autopkgtest [23:22:29]: testbed apt version: 2.9.6 92s autopkgtest [23:22:29]: @@@@@@@@@@@@@@@@@@@@ test bed setup 93s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [126 kB] 93s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [3288 B] 93s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [352 kB] 93s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [46.4 kB] 93s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [8548 B] 93s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el Packages [87.9 kB] 93s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el c-n-f Metadata [2116 B] 93s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/restricted ppc64el Packages [1368 B] 93s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/restricted ppc64el c-n-f Metadata [120 B] 93s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/universe ppc64el Packages [416 kB] 93s Get:11 http://ftpmaster.internal/ubuntu oracular-proposed/universe ppc64el c-n-f Metadata [8952 B] 93s Get:12 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse ppc64el Packages [1788 B] 93s Get:13 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse ppc64el c-n-f Metadata [120 B] 95s Fetched 1055 kB in 1s (1226 kB/s) 95s Reading package lists... 97s Reading package lists... 98s Building dependency tree... 98s Reading state information... 98s Calculating upgrade... 98s The following packages will be upgraded: 98s libc-bin libc-dev-bin libc-devtools libc6 libc6-dev locales 98s 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 98s Need to get 10.1 MB of archives. 98s After this operation, 1843 kB disk space will be freed. 98s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc-devtools ppc64el 2.39-3.1ubuntu3 [29.5 kB] 98s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc6-dev ppc64el 2.39-3.1ubuntu3 [1982 kB] 99s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc-dev-bin ppc64el 2.39-3.1ubuntu3 [21.0 kB] 99s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc6 ppc64el 2.39-3.1ubuntu3 [3174 kB] 99s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc-bin ppc64el 2.39-3.1ubuntu3 [720 kB] 99s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el locales all 2.39-3.1ubuntu3 [4220 kB] 100s Preconfiguring packages ... 100s Fetched 10.1 MB in 1s (6864 kB/s) 100s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72754 files and directories currently installed.) 100s Preparing to unpack .../libc-devtools_2.39-3.1ubuntu3_ppc64el.deb ... 100s Unpacking libc-devtools (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 100s Preparing to unpack .../libc6-dev_2.39-3.1ubuntu3_ppc64el.deb ... 100s Unpacking libc6-dev:ppc64el (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 100s Preparing to unpack .../libc-dev-bin_2.39-3.1ubuntu3_ppc64el.deb ... 100s Unpacking libc-dev-bin (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 100s Preparing to unpack .../libc6_2.39-3.1ubuntu3_ppc64el.deb ... 101s Unpacking libc6:ppc64el (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 101s Setting up libc6:ppc64el (2.39-3.1ubuntu3) ... 101s Error: Could not restart systemd, systemd binary not working 101s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72754 files and directories currently installed.) 101s Preparing to unpack .../libc-bin_2.39-3.1ubuntu3_ppc64el.deb ... 101s Unpacking libc-bin (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 101s Setting up libc-bin (2.39-3.1ubuntu3) ... 101s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72754 files and directories currently installed.) 101s Preparing to unpack .../locales_2.39-3.1ubuntu3_all.deb ... 101s Unpacking locales (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 101s Setting up locales (2.39-3.1ubuntu3) ... 102s Generating locales (this might take a while)... 103s en_US.UTF-8... done 103s Generation complete. 103s Setting up libc-dev-bin (2.39-3.1ubuntu3) ... 103s Setting up libc-devtools (2.39-3.1ubuntu3) ... 103s Setting up libc6-dev:ppc64el (2.39-3.1ubuntu3) ... 103s Processing triggers for man-db (2.12.1-2) ... 104s Processing triggers for systemd (256-1ubuntu1) ... 105s Reading package lists... 105s Building dependency tree... 105s Reading state information... 105s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 106s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 106s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease 106s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 106s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 107s Reading package lists... 107s Reading package lists... 107s Building dependency tree... 107s Reading state information... 107s Calculating upgrade... 108s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 108s Reading package lists... 108s Building dependency tree... 108s Reading state information... 108s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 110s autopkgtest [23:22:47]: testbed running kernel: Linux 6.8.0-31-generic #31-Ubuntu SMP Sat Apr 20 00:05:55 UTC 2024 111s autopkgtest [23:22:48]: @@@@@@@@@@@@@@@@@@@@ apt-source pybigwig 112s Get:1 http://ftpmaster.internal/ubuntu oracular/universe pybigwig 0.3.22+dfsg-1build3 (dsc) [2246 B] 112s Get:2 http://ftpmaster.internal/ubuntu oracular/universe pybigwig 0.3.22+dfsg-1build3 (tar) [31.6 kB] 112s Get:3 http://ftpmaster.internal/ubuntu oracular/universe pybigwig 0.3.22+dfsg-1build3 (diff) [4424 B] 112s gpgv: Signature made Mon Apr 1 07:17:01 2024 UTC 112s gpgv: using RSA key A089FB36AAFBDAD5ACC1325069F790171A210984 112s gpgv: Can't check signature: No public key 112s dpkg-source: warning: cannot verify inline signature for ./pybigwig_0.3.22+dfsg-1build3.dsc: no acceptable signature found 112s autopkgtest [23:22:49]: testing package pybigwig version 0.3.22+dfsg-1build3 112s autopkgtest [23:22:49]: build not needed 113s autopkgtest [23:22:50]: test command1: preparing testbed 114s Reading package lists... 114s Building dependency tree... 114s Reading state information... 114s Starting pkgProblemResolver with broken count: 0 114s Starting 2 pkgProblemResolver with broken count: 0 114s Done 114s The following additional packages will be installed: 114s libbigwig0t64 libblas3 libgfortran5 liblapack3 libpython3.12t64 python3-all 114s python3-numpy python3-pybigwig 114s Suggested packages: 114s gcc gfortran python-numpy-doc python3-dev python3-pytest 114s The following NEW packages will be installed: 114s autopkgtest-satdep libbigwig0t64 libblas3 libgfortran5 liblapack3 114s libpython3.12t64 python3-all python3-numpy python3-pybigwig 114s 0 upgraded, 9 newly installed, 0 to remove and 0 not upgraded. 114s Need to get 10.6 MB/10.6 MB of archives. 114s After this operation, 45.4 MB of additional disk space will be used. 114s Get:1 /tmp/autopkgtest.sKGguv/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [716 B] 115s Get:2 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libbigwig0t64 ppc64el 0.4.7+dfsg-3.1build2 [38.0 kB] 115s Get:3 http://ftpmaster.internal/ubuntu oracular/main ppc64el libblas3 ppc64el 3.12.0-3build1 [227 kB] 115s Get:4 http://ftpmaster.internal/ubuntu oracular/main ppc64el libgfortran5 ppc64el 14.1.0-1ubuntu1 [573 kB] 115s Get:5 http://ftpmaster.internal/ubuntu oracular/main ppc64el liblapack3 ppc64el 3.12.0-3build1 [2804 kB] 115s Get:6 http://ftpmaster.internal/ubuntu oracular/main ppc64el libpython3.12t64 ppc64el 3.12.4-1ubuntu1 [2540 kB] 116s Get:7 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-all ppc64el 3.12.3-0ubuntu1 [888 B] 116s Get:8 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-numpy ppc64el 1:1.26.4+ds-10 [4408 kB] 116s Get:9 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-pybigwig ppc64el 0.3.22+dfsg-1build3 [45.9 kB] 116s Fetched 10.6 MB in 2s (6948 kB/s) 116s Selecting previously unselected package libbigwig0t64:ppc64el. 116s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72754 files and directories currently installed.) 116s Preparing to unpack .../0-libbigwig0t64_0.4.7+dfsg-3.1build2_ppc64el.deb ... 116s Unpacking libbigwig0t64:ppc64el (0.4.7+dfsg-3.1build2) ... 116s Selecting previously unselected package libblas3:ppc64el. 116s Preparing to unpack .../1-libblas3_3.12.0-3build1_ppc64el.deb ... 116s Unpacking libblas3:ppc64el (3.12.0-3build1) ... 116s Selecting previously unselected package libgfortran5:ppc64el. 116s Preparing to unpack .../2-libgfortran5_14.1.0-1ubuntu1_ppc64el.deb ... 116s Unpacking libgfortran5:ppc64el (14.1.0-1ubuntu1) ... 116s Selecting previously unselected package liblapack3:ppc64el. 116s Preparing to unpack .../3-liblapack3_3.12.0-3build1_ppc64el.deb ... 116s Unpacking liblapack3:ppc64el (3.12.0-3build1) ... 116s Selecting previously unselected package libpython3.12t64:ppc64el. 116s Preparing to unpack .../4-libpython3.12t64_3.12.4-1ubuntu1_ppc64el.deb ... 116s Unpacking libpython3.12t64:ppc64el (3.12.4-1ubuntu1) ... 117s Selecting previously unselected package python3-all. 117s Preparing to unpack .../5-python3-all_3.12.3-0ubuntu1_ppc64el.deb ... 117s Unpacking python3-all (3.12.3-0ubuntu1) ... 117s Selecting previously unselected package python3-numpy. 117s Preparing to unpack .../6-python3-numpy_1%3a1.26.4+ds-10_ppc64el.deb ... 117s Unpacking python3-numpy (1:1.26.4+ds-10) ... 117s Selecting previously unselected package python3-pybigwig. 117s Preparing to unpack .../7-python3-pybigwig_0.3.22+dfsg-1build3_ppc64el.deb ... 117s Unpacking python3-pybigwig (0.3.22+dfsg-1build3) ... 117s Selecting previously unselected package autopkgtest-satdep. 117s Preparing to unpack .../8-1-autopkgtest-satdep.deb ... 117s Unpacking autopkgtest-satdep (0) ... 117s Setting up python3-all (3.12.3-0ubuntu1) ... 117s Setting up libpython3.12t64:ppc64el (3.12.4-1ubuntu1) ... 117s Setting up libblas3:ppc64el (3.12.0-3build1) ... 117s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 117s Setting up libgfortran5:ppc64el (14.1.0-1ubuntu1) ... 117s Setting up libbigwig0t64:ppc64el (0.4.7+dfsg-3.1build2) ... 117s Setting up liblapack3:ppc64el (3.12.0-3build1) ... 117s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 117s Setting up python3-numpy (1:1.26.4+ds-10) ... 119s Setting up python3-pybigwig (0.3.22+dfsg-1build3) ... 119s Setting up autopkgtest-satdep (0) ... 119s Processing triggers for man-db (2.12.1-2) ... 119s Processing triggers for libc-bin (2.39-3.1ubuntu3) ... 121s (Reading database ... 73679 files and directories currently installed.) 121s Removing autopkgtest-satdep (0) ... 122s autopkgtest [23:22:59]: test command1: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd pyBigWigTest ; $py test.py ; cd .. ; done 122s autopkgtest [23:22:59]: test command1: [----------------------- 123s autopkgtest [23:23:00]: test command1: -----------------------] 123s command1 PASS 123s autopkgtest [23:23:00]: test command1: - - - - - - - - - - results - - - - - - - - - - 123s autopkgtest [23:23:00]: @@@@@@@@@@@@@@@@@@@@ summary 123s command1 PASS 135s nova [W] Using flock in scalingstack-bos02-ppc64el 135s Creating nova instance adt-oracular-ppc64el-pybigwig-20240712-232057-juju-7f2275-prod-proposed-migration-environment-3-8d89f500-4784-431c-aeea-09e6f9e78b61 from image adt/ubuntu-oracular-ppc64el-server-20240712.img (UUID 740e1066-971a-4f95-9033-0eb4cf07697e)...